Your job contains 1 sequence.
>psy2636
TQLGRSSSSESPKLRHSAPLSSASSSPGCDTSRPTPPSPSQLCAVCGDIAACQHYGVRTC
EGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLQVGMVKEVVRTDSLKG
RRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRH
FADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIR
HFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS
FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2636
(335 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q6NXU0 - symbol:NR4A2 "Nuclear receptor subfami... 355 1.5e-67 2
UNIPROTKB|Q08E53 - symbol:NR4A2 "Nuclear receptor subfami... 355 7.2e-67 2
UNIPROTKB|P43354 - symbol:NR4A2 "Nuclear receptor subfami... 355 7.2e-67 2
UNIPROTKB|F1RPU1 - symbol:NR4A2 "Uncharacterized protein"... 355 7.2e-67 2
UNIPROTKB|Q5R5Y4 - symbol:NR4A2 "Nuclear receptor subfami... 355 7.2e-67 2
MGI|MGI:1352456 - symbol:Nr4a2 "nuclear receptor subfamil... 355 7.2e-67 2
RGD|3202 - symbol:Nr4a2 "nuclear receptor subfamily 4, gr... 355 7.2e-67 2
UNIPROTKB|E2RBX8 - symbol:NR4A2 "Uncharacterized protein"... 355 8.6e-67 2
UNIPROTKB|F5H4G9 - symbol:NR4A2 "Nuclear receptor subfami... 355 8.6e-67 2
UNIPROTKB|E1C6K9 - symbol:NR4A2 "Uncharacterized protein"... 353 2.0e-66 2
ZFIN|ZDB-GENE-990415-184 - symbol:nr4a2a "nuclear recepto... 354 8.9e-66 2
ZFIN|ZDB-GENE-040718-103 - symbol:nr4a2b "nuclear recepto... 352 1.7e-64 2
UNIPROTKB|E1B7S6 - symbol:NR4A3 "Uncharacterized protein"... 344 2.8e-63 2
UNIPROTKB|Q92570 - symbol:NR4A3 "Nuclear receptor subfami... 344 4.0e-63 2
MGI|MGI:1352457 - symbol:Nr4a3 "nuclear receptor subfamil... 341 1.8e-62 2
RGD|61882 - symbol:Nr4a3 "nuclear receptor subfamily 4, g... 341 1.9e-62 2
UNIPROTKB|P51179 - symbol:Nr4a3 "Nuclear receptor subfami... 341 1.9e-62 2
UNIPROTKB|O97726 - symbol:NOR-1 "Uncharacterized protein"... 340 2.3e-62 2
UNIPROTKB|E1BYS2 - symbol:NR4A3 "Uncharacterized protein"... 341 3.4e-61 2
ZFIN|ZDB-GENE-070824-4 - symbol:nr4a3 "nuclear receptor s... 335 4.5e-60 2
UNIPROTKB|E2RRN7 - symbol:NR4A2 "Uncharacterized protein"... 355 5.4e-51 2
UNIPROTKB|C9J8W4 - symbol:NR4A2 "Nuclear receptor subfami... 355 5.4e-51 2
UNIPROTKB|Q3LZI9 - symbol:Nr4a2 "Nuclear receptor subfami... 355 5.4e-51 2
FB|FBgn0014859 - symbol:Hr38 "Hormone receptor-like in 38... 539 5.8e-51 1
UNIPROTKB|E9PBQ4 - symbol:NR4A2 "Nuclear receptor subfami... 355 6.8e-51 2
UNIPROTKB|F8W6I3 - symbol:NR4A2 "Nuclear receptor subfami... 355 2.4e-50 2
RGD|620029 - symbol:Nr4a1 "nuclear receptor subfamily 4, ... 419 2.0e-41 2
MGI|MGI:1352454 - symbol:Nr4a1 "nuclear receptor subfamil... 424 8.7e-40 1
UNIPROTKB|K9J6P0 - symbol:K9J6P0 "Uncharacterized protein... 420 2.3e-39 1
UNIPROTKB|P51666 - symbol:NR4A1 "Nuclear receptor subfami... 420 2.3e-39 1
UNIPROTKB|Q0V8F0 - symbol:NR4A1 "Nuclear receptor subfami... 417 4.8e-39 1
UNIPROTKB|P22736 - symbol:NR4A1 "Nuclear receptor subfami... 417 4.8e-39 1
UNIPROTKB|F5GXF0 - symbol:NR4A1 "Nuclear receptor subfami... 417 1.2e-38 1
ZFIN|ZDB-GENE-040704-11 - symbol:nr4a1 "nuclear receptor ... 367 2.3e-33 1
UNIPROTKB|O97727 - symbol:NOR-1 "Uncharacterized protein"... 340 6.9e-31 1
UNIPROTKB|I3LM58 - symbol:NR4A1 "Uncharacterized protein"... 338 1.1e-30 1
ZFIN|ZDB-GENE-990415-68 - symbol:esrra "estrogen-related ... 207 3.1e-26 2
ZFIN|ZDB-GENE-030821-2 - symbol:esrrga "estrogen-related ... 201 9.4e-26 2
MGI|MGI:1346831 - symbol:Esrra "estrogen related receptor... 207 1.2e-24 2
RGD|1583866 - symbol:Esrra "estrogen related receptor, al... 207 1.2e-24 2
WB|WBGene00003605 - symbol:nhr-6 species:6239 "Caenorhabd... 287 2.0e-24 1
UNIPROTKB|Q6QMY5 - symbol:ESRRA "Steroid hormone receptor... 207 3.2e-24 2
UNIPROTKB|F1MBX3 - symbol:ESRRA "Uncharacterized protein"... 207 4.0e-24 2
UNIPROTKB|F1RQP2 - symbol:ESRRA "Uncharacterized protein"... 207 4.0e-24 2
UNIPROTKB|P11474 - symbol:ESRRA "Steroid hormone receptor... 207 4.1e-24 2
ZFIN|ZDB-GENE-040616-4 - symbol:esrrgb "estrogen-related ... 199 6.6e-24 2
ZFIN|ZDB-GENE-070314-1 - symbol:rargb "retinoic acid rece... 203 6.9e-24 2
ZFIN|ZDB-GENE-980526-531 - symbol:rarga "retinoic acid re... 203 1.0e-23 2
UNIPROTKB|F1PFF7 - symbol:ESRRA "Steroid hormone receptor... 207 2.2e-23 2
UNIPROTKB|F1NQH5 - symbol:RARB "Retinoic acid receptor be... 190 9.3e-23 2
UNIPROTKB|F1N9Q8 - symbol:RARB "Retinoic acid receptor be... 190 2.2e-22 2
ZFIN|ZDB-GENE-980526-72 - symbol:rarab "retinoic acid rec... 200 2.4e-22 2
UNIPROTKB|P22448 - symbol:RARB "Retinoic acid receptor be... 190 3.5e-22 2
ZFIN|ZDB-GENE-040616-2 - symbol:esrrb "estrogen-related r... 198 4.0e-22 2
UNIPROTKB|E2R2A6 - symbol:RARB "Uncharacterized protein" ... 189 5.6e-22 2
RGD|3535 - symbol:Rarb "retinoic acid receptor, beta" spe... 192 6.8e-22 2
MGI|MGI:97857 - symbol:Rarb "retinoic acid receptor, beta... 189 7.7e-22 2
UNIPROTKB|E1BX47 - symbol:NR1H3 "Uncharacterized protein"... 251 2.7e-21 1
MGI|MGI:1352462 - symbol:Nr1h3 "nuclear receptor subfamil... 183 2.9e-21 2
UNIPROTKB|Q5E9B6 - symbol:NR1H3 "Oxysterols receptor LXR-... 183 2.9e-21 2
UNIPROTKB|Q4TU03 - symbol:LXRA "Liver X receptor alpha" s... 183 2.9e-21 2
UNIPROTKB|F1M839 - symbol:Esr1 "Estrogen receptor" specie... 181 3.1e-21 2
RGD|61909 - symbol:Nr1h3 "nuclear receptor subfamily 1, g... 180 3.8e-21 2
UNIPROTKB|Q62685 - symbol:Nr1h3 "Oxysterols receptor LXR-... 180 3.8e-21 2
UNIPROTKB|Q8JHU1 - symbol:LXR "Uncharacterized protein" s... 251 3.8e-21 1
UNIPROTKB|F6SD09 - symbol:ESR1 "Estrogen receptor" specie... 181 5.1e-21 2
UNIPROTKB|E5L8C9 - symbol:ESR1 "Estrogen receptor alpha" ... 181 6.1e-21 2
UNIPROTKB|Q9QZJ5 - symbol:ESR1 "Estrogen receptor" specie... 181 8.1e-21 2
UNIPROTKB|E2RS27 - symbol:NR1H3 "Uncharacterized protein"... 180 8.1e-21 2
RGD|2581 - symbol:Esr1 "estrogen receptor 1" species:1011... 181 8.3e-21 2
MGI|MGI:1352467 - symbol:Esr1 "estrogen receptor 1 (alpha... 181 1.3e-20 2
UNIPROTKB|Q13133 - symbol:NR1H3 "Oxysterols receptor LXR-... 179 1.7e-20 2
UNIPROTKB|H0Y4W6 - symbol:ESR1 "Estrogen receptor" specie... 181 2.5e-20 2
ZFIN|ZDB-GENE-050105-1 - symbol:nr1d1 "nuclear receptor s... 173 2.6e-20 2
UNIPROTKB|P06212 - symbol:ESR1 "Estrogen receptor" specie... 176 2.8e-20 2
UNIPROTKB|Q29040 - symbol:ESR1 "Estrogen receptor" specie... 181 3.4e-20 2
UNIPROTKB|E2QSI1 - symbol:ESR1 "Uncharacterized protein" ... 181 3.6e-20 2
UNIPROTKB|F1MX59 - symbol:ESR1 "Estrogen receptor" specie... 181 4.4e-20 2
UNIPROTKB|P49884 - symbol:ESR1 "Estrogen receptor" specie... 181 4.4e-20 2
ZFIN|ZDB-GENE-990415-244 - symbol:nr1d2b "nuclear recepto... 180 4.7e-20 2
UNIPROTKB|Q53AD2 - symbol:ESR1 "Estrogen receptor" specie... 181 5.5e-20 2
UNIPROTKB|C9JU32 - symbol:ESRRG "Estrogen-related recepto... 237 5.7e-20 1
UNIPROTKB|F6V0I8 - symbol:ESR1 "Uncharacterized protein" ... 181 7.0e-20 2
ZFIN|ZDB-GENE-020806-5 - symbol:esr1 "estrogen receptor 1... 179 7.3e-20 2
UNIPROTKB|O18473 - symbol:EcR "Ecdysone receptor" species... 180 8.8e-20 2
ZFIN|ZDB-GENE-040616-3 - symbol:esrrd "estrogen-related r... 192 8.8e-20 2
UNIPROTKB|Q14995 - symbol:NR1D2 "Nuclear receptor subfami... 171 9.1e-20 2
ZFIN|ZDB-GENE-080403-5 - symbol:nr1d4a "nuclear receptor ... 181 1.2e-19 2
UNIPROTKB|P03372 - symbol:ESR1 "Estrogen receptor" specie... 181 1.4e-19 2
UNIPROTKB|I3LL46 - symbol:NR1D2 "Uncharacterized protein"... 171 1.8e-19 2
UNIPROTKB|Q9TV98 - symbol:ESR1 "Estrogen receptor" specie... 181 1.8e-19 2
UNIPROTKB|E2QXI5 - symbol:NR1D2 "Uncharacterized protein"... 171 1.8e-19 2
UNIPROTKB|J9NWD9 - symbol:ESRRG "Uncharacterized protein"... 237 1.9e-19 1
UNIPROTKB|Q5UKY7 - symbol:ESRRG "Nuclear receptor subfami... 237 1.9e-19 1
UNIPROTKB|E1BC39 - symbol:ESRRG "Uncharacterized protein"... 237 2.2e-19 1
UNIPROTKB|E2R7U1 - symbol:ESRRG "Uncharacterized protein"... 237 2.3e-19 1
UNIPROTKB|P62508 - symbol:ESRRG "Estrogen-related recepto... 237 2.3e-19 1
MGI|MGI:1347056 - symbol:Esrrg "estrogen-related receptor... 237 2.3e-19 1
RGD|1303236 - symbol:Esrrg "estrogen-related receptor gam... 237 2.3e-19 1
FB|FBgn0004865 - symbol:Eip78C "Ecdysone-induced protein ... 169 2.5e-19 2
WARNING: Descriptions of 644 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q6NXU0 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4, group A, member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001975 "response
to amphetamine" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0010035 "response to inorganic substance"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0017085
"response to insecticide" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021986 "habenula development" evidence=IEA] [GO:0033554
"cellular response to stress" evidence=IEA] [GO:0042053 "regulation
of dopamine metabolic process" evidence=IEA] [GO:0042416 "dopamine
biosynthetic process" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0043085 "positive regulation of catalytic
activity" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0043085 GO:GO:0001764 GO:GO:0033554
GO:GO:0046872 GO:GO:0071542 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944 GO:GO:0008344
GO:GO:0001975 GO:GO:0043524 GO:GO:0009791 GO:GO:0010035
GO:GO:0042416 GO:GO:0021952 GO:GO:0042053 GO:GO:0016265
GO:GO:0030522 GO:GO:0043576 GO:GO:0017085 GO:GO:0042551
GO:GO:0021986 HOGENOM:HOG000230925 HOVERGEN:HBG052663 EMBL:AC074099
UniGene:Hs.563344 HGNC:HGNC:7981 ChiTaRS:NR4A2 HSSP:P20393
EMBL:BC066890 EMBL:AK291456 IPI:IPI00927645 SMR:Q6NXU0
STRING:Q6NXU0 Ensembl:ENST00000426264 Uniprot:Q6NXU0
Length = 535
Score = 355 (130.0 bits), Expect = 1.5e-67, Sum P(2) = 1.5e-67
Identities = 72/101 (71%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
DT P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 182 DTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 241
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 242 CPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRL 282
Score = 353 (129.3 bits), Expect = 1.5e-67, Sum P(2) = 1.5e-67
Identities = 68/115 (59%), Positives = 91/115 (79%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 336 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPV 395
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG+ W+++I+EF +L M IDISAF+C+ AL ++
Sbjct: 396 EGKLIFCNGVVLHRLQCVRGFGE-WIDSIVEFSSNLQNMNIDISAFSCIAALAMV 449
Score = 163 (62.4 bits), Expect = 1.5e-47, Sum P(2) = 1.5e-47
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF-----YREPNP 214
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF YR NP
Sbjct: 336 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS-NP 394
Query: 215 LE 216
+E
Sbjct: 395 VE 396
>UNIPROTKB|Q08E53 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9913 "Bos taurus" [GO:0071542 "dopaminergic neuron
differentiation" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0043085
"positive regulation of catalytic activity" evidence=IEA]
[GO:0042551 "neuron maturation" evidence=IEA] [GO:0042416 "dopamine
biosynthetic process" evidence=IEA] [GO:0042053 "regulation of
dopamine metabolic process" evidence=IEA] [GO:0033554 "cellular
response to stress" evidence=IEA] [GO:0031668 "cellular response to
extracellular stimulus" evidence=IEA] [GO:0021986 "habenula
development" evidence=IEA] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=IEA] [GO:0016265 "death"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0043085 GO:GO:0001764 GO:GO:0033554 GO:GO:0046872
GO:GO:0071542 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0001666 GO:GO:0045944 GO:GO:0008344 GO:GO:0001975
GO:GO:0043524 GO:GO:0006351 GO:GO:0009791 GO:GO:0042416
GO:GO:0021952 GO:GO:0042053 GO:GO:0016265 GO:GO:0030522
GO:GO:0043576 GO:GO:0042551 eggNOG:NOG245120 KO:K08558
GeneTree:ENSGT00640000091364 GO:GO:0021986 HOGENOM:HOG000230925
HOVERGEN:HBG052663 EMBL:BC123415 IPI:IPI00708375
RefSeq:NP_001069676.1 UniGene:Bt.25332 ProteinModelPortal:Q08E53
SMR:Q08E53 STRING:Q08E53 Ensembl:ENSBTAT00000004758 GeneID:540245
KEGG:bta:540245 CTD:4929 InParanoid:Q08E53 OMA:MWEDPGS
OrthoDB:EOG40CHGK NextBio:20878513 Uniprot:Q08E53
Length = 598
Score = 355 (130.0 bits), Expect = 7.2e-67, Sum P(2) = 7.2e-67
Identities = 72/101 (71%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
DT P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 245 DTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 304
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 305 CPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRL 345
Score = 353 (129.3 bits), Expect = 7.2e-67, Sum P(2) = 7.2e-67
Identities = 68/115 (59%), Positives = 91/115 (79%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFTDLPKADQDLLFESAFLELFVLRLAYRSNPV 458
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG+ W+++I+EF +L M IDISAF+C+ AL ++
Sbjct: 459 EGKLIFCNGVVLHRLQCVRGFGE-WIDSIVEFSSNLQNMNIDISAFSCIAALAMV 512
Score = 163 (62.4 bits), Expect = 7.1e-47, Sum P(2) = 7.1e-47
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF-----YREPNP 214
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF YR NP
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFTDLPKADQDLLFESAFLELFVLRLAYRS-NP 457
Query: 215 LE 216
+E
Sbjct: 458 VE 459
>UNIPROTKB|P43354 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001975 "response
to amphetamine" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0010035 "response to
inorganic substance" evidence=IEA] [GO:0016265 "death"
evidence=IEA] [GO:0017085 "response to insecticide" evidence=IEA]
[GO:0021952 "central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0021986 "habenula development" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0042053
"regulation of dopamine metabolic process" evidence=IEA]
[GO:0042416 "dopamine biosynthetic process" evidence=IEA]
[GO:0042551 "neuron maturation" evidence=IEA] [GO:0043085 "positive
regulation of catalytic activity" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043576 "regulation of respiratory gaseous exchange"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IDA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=ISS] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0031668 "cellular response to extracellular stimulus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003073
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005737 GO:GO:0043085 GO:GO:0001764 GO:GO:0005654
GO:GO:0033554 GO:GO:0046872 GO:GO:0071542 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944
GO:GO:0008344 GO:GO:0001975 GO:GO:0043524 GO:GO:0031668
GO:GO:0009791 GO:GO:0010035 GO:GO:0042416 EMBL:CH471058
GO:GO:0021952 GO:GO:0042053 GO:GO:0016265 GO:GO:0006367
GO:GO:0043576 Orphanet:2828 GO:GO:0017085 GO:GO:0042551
eggNOG:NOG245120 KO:K08558 GO:GO:0021986 HOVERGEN:HBG052663
CTD:4929 OrthoDB:EOG40CHGK EMBL:X75918 EMBL:AB017586 EMBL:AB019433
EMBL:AC074099 EMBL:BC009288 EMBL:S77154 IPI:IPI01013823 PIR:A57040
RefSeq:NP_006177.1 UniGene:Hs.563344 PDB:1OVL PDBsum:1OVL
ProteinModelPortal:P43354 SMR:P43354 IntAct:P43354 STRING:P43354
PhosphoSite:P43354 DMDM:1171750 PRIDE:P43354 DNASU:4929
Ensembl:ENST00000339562 Ensembl:ENST00000409572 GeneID:4929
KEGG:hsa:4929 UCSC:uc002tyx.4 GeneCards:GC02M157180 HGNC:HGNC:7981
HPA:CAB010481 HPA:HPA000543 MIM:601828 neXtProt:NX_P43354
PharmGKB:PA31762 InParanoid:P43354 PhylomeDB:P43354
ChEMBL:CHEMBL5002 ChiTaRS:NR4A2 EvolutionaryTrace:P43354
GenomeRNAi:4929 NextBio:18989 ArrayExpress:P43354 Bgee:P43354
CleanEx:HS_NR4A2 Genevestigator:P43354 GermOnline:ENSG00000153234
Uniprot:P43354
Length = 598
Score = 355 (130.0 bits), Expect = 7.2e-67, Sum P(2) = 7.2e-67
Identities = 72/101 (71%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
DT P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 245 DTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 304
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 305 CPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRL 345
Score = 353 (129.3 bits), Expect = 7.2e-67, Sum P(2) = 7.2e-67
Identities = 68/115 (59%), Positives = 91/115 (79%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPV 458
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG+ W+++I+EF +L M IDISAF+C+ AL ++
Sbjct: 459 EGKLIFCNGVVLHRLQCVRGFGE-WIDSIVEFSSNLQNMNIDISAFSCIAALAMV 512
Score = 163 (62.4 bits), Expect = 7.1e-47, Sum P(2) = 7.1e-47
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF-----YREPNP 214
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF YR NP
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS-NP 457
Query: 215 LE 216
+E
Sbjct: 458 VE 459
>UNIPROTKB|F1RPU1 [details] [associations]
symbol:NR4A2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043576
"regulation of respiratory gaseous exchange" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043085 "positive regulation of catalytic
activity" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0042416 "dopamine biosynthetic process"
evidence=IEA] [GO:0042053 "regulation of dopamine metabolic
process" evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0031668 "cellular response to extracellular
stimulus" evidence=IEA] [GO:0021986 "habenula development"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001975 "response to amphetamine" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001666 "response
to hypoxia" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0043085 GO:GO:0001764 GO:GO:0033554 GO:GO:0046872
GO:GO:0071542 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0001666 GO:GO:0045944 GO:GO:0008344 GO:GO:0001975
GO:GO:0043524 GO:GO:0009791 GO:GO:0042416 GO:GO:0021952
GO:GO:0042053 GO:GO:0016265 GO:GO:0030522 GO:GO:0043576
GO:GO:0042551 GeneTree:ENSGT00640000091364 GO:GO:0021986
OMA:MWEDPGS EMBL:CU463810 EMBL:HQ738304 Ensembl:ENSSSCT00000017282
Uniprot:F1RPU1
Length = 598
Score = 355 (130.0 bits), Expect = 7.2e-67, Sum P(2) = 7.2e-67
Identities = 72/101 (71%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
DT P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 245 DTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 304
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 305 CPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRL 345
Score = 353 (129.3 bits), Expect = 7.2e-67, Sum P(2) = 7.2e-67
Identities = 68/115 (59%), Positives = 91/115 (79%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPV 458
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG+ W+++I+EF +L M IDISAF+C+ AL ++
Sbjct: 459 EGKLIFCNGVVLHRLQCVRGFGE-WIDSIVEFSSNLQNMNIDISAFSCIAALAMV 512
Score = 163 (62.4 bits), Expect = 7.1e-47, Sum P(2) = 7.1e-47
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF-----YREPNP 214
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF YR NP
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS-NP 457
Query: 215 LE 216
+E
Sbjct: 458 VE 459
>UNIPROTKB|Q5R5Y4 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=ISS]
[GO:0071542 "dopaminergic neuron differentiation" evidence=ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0071542 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0006351 GO:GO:0030522 HOGENOM:HOG000230925
HOVERGEN:HBG052663 EMBL:CR860717 UniGene:Pab.19568 HSSP:P43354
ProteinModelPortal:Q5R5Y4 SMR:Q5R5Y4 InParanoid:Q5R5Y4
Uniprot:Q5R5Y4
Length = 598
Score = 355 (130.0 bits), Expect = 7.2e-67, Sum P(2) = 7.2e-67
Identities = 72/101 (71%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
DT P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 245 DTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 304
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 305 CPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRL 345
Score = 353 (129.3 bits), Expect = 7.2e-67, Sum P(2) = 7.2e-67
Identities = 68/115 (59%), Positives = 91/115 (79%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPV 458
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG+ W+++I+EF +L M IDISAF+C+ AL ++
Sbjct: 459 EGKLIFCNGVVLHRLQCVRGFGE-WIDSIVEFSSNLQNMNIDISAFSCIAALAMV 512
Score = 163 (62.4 bits), Expect = 7.1e-47, Sum P(2) = 7.1e-47
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF-----YREPNP 214
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF YR NP
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS-NP 457
Query: 215 LE 216
+E
Sbjct: 458 VE 459
>MGI|MGI:1352456 [details] [associations]
symbol:Nr4a2 "nuclear receptor subfamily 4, group A, member
2" species:10090 "Mus musculus" [GO:0001666 "response to hypoxia"
evidence=IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001975 "response to amphetamine" evidence=IMP] [GO:0003677
"DNA binding" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IMP] [GO:0006950
"response to stress" evidence=IMP] [GO:0007399 "nervous system
development" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IMP]
[GO:0009791 "post-embryonic development" evidence=IMP] [GO:0010035
"response to inorganic substance" evidence=ISO] [GO:0010467 "gene
expression" evidence=IMP] [GO:0016265 "death" evidence=IMP]
[GO:0017085 "response to insecticide" evidence=ISO] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0021953 "central nervous system neuron
differentiation" evidence=IMP] [GO:0021986 "habenula development"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] [GO:0031668 "cellular response to extracellular
stimulus" evidence=ISO;IDA] [GO:0033554 "cellular response to
stress" evidence=IMP] [GO:0042053 "regulation of dopamine metabolic
process" evidence=IDA] [GO:0042416 "dopamine biosynthetic process"
evidence=IMP] [GO:0042417 "dopamine metabolic process"
evidence=IMP] [GO:0042551 "neuron maturation" evidence=IMP]
[GO:0043085 "positive regulation of catalytic activity"
evidence=IMP] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IDA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352456
GO:GO:0005634 GO:GO:0005737 GO:GO:0043085 GO:GO:0001764
GO:GO:0033554 GO:GO:0046872 GO:GO:0071542 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944
GO:GO:0008344 GO:GO:0001975 GO:GO:0043524 GO:GO:0031668
GO:GO:0009791 GO:GO:0010035 GO:GO:0042416 GO:GO:0021952
GO:GO:0042053 GO:GO:0016265 GO:GO:0043576 GO:GO:0017085
GO:GO:0042551 eggNOG:NOG245120 KO:K08558 GO:GO:0021986
HOGENOM:HOG000230925 HOVERGEN:HBG052663 CTD:4929 OMA:MWEDPGS
OrthoDB:EOG40CHGK ChiTaRS:NR4A2 EMBL:S53744 EMBL:U86783
IPI:IPI00112726 IPI:IPI00230431 PIR:A46225 RefSeq:NP_001132981.1
RefSeq:NP_038641.1 UniGene:Mm.3507 ProteinModelPortal:Q06219
SMR:Q06219 IntAct:Q06219 STRING:Q06219 PhosphoSite:Q06219
PRIDE:Q06219 Ensembl:ENSMUST00000028166 Ensembl:ENSMUST00000112629
GeneID:18227 KEGG:mmu:18227 UCSC:uc012bvn.1 InParanoid:Q06219
NextBio:293656 Bgee:Q06219 CleanEx:MM_NR4A2 Genevestigator:Q06219
GermOnline:ENSMUSG00000026826 Uniprot:Q06219
Length = 598
Score = 355 (130.0 bits), Expect = 7.2e-67, Sum P(2) = 7.2e-67
Identities = 72/101 (71%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
DT P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 245 DTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 304
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 305 CPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRL 345
Score = 353 (129.3 bits), Expect = 7.2e-67, Sum P(2) = 7.2e-67
Identities = 68/115 (59%), Positives = 91/115 (79%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPV 458
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG+ W+++I+EF +L M IDISAF+C+ AL ++
Sbjct: 459 EGKLIFCNGVVLHRLQCVRGFGE-WIDSIVEFSSNLQNMNIDISAFSCIAALAMV 512
Score = 163 (62.4 bits), Expect = 7.1e-47, Sum P(2) = 7.1e-47
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF-----YREPNP 214
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF YR NP
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS-NP 457
Query: 215 LE 216
+E
Sbjct: 458 VE 459
>RGD|3202 [details] [associations]
symbol:Nr4a2 "nuclear receptor subfamily 4, group A, member 2"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEA;ISO] [GO:0001764 "neuron migration" evidence=IEA;ISO]
[GO:0001975 "response to amphetamine" evidence=IEA;ISO] [GO:0003677
"DNA binding" evidence=ISO;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA;TAS] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006950 "response to
stress" evidence=ISO] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA;ISO] [GO:0009791
"post-embryonic development" evidence=IEA;ISO] [GO:0010035 "response
to inorganic substance" evidence=IDA] [GO:0010467 "gene expression"
evidence=ISO] [GO:0016265 "death" evidence=IEA;ISO] [GO:0017085
"response to insecticide" evidence=IDA] [GO:0021952 "central nervous
system projection neuron axonogenesis" evidence=IEA;ISO] [GO:0021953
"central nervous system neuron differentiation" evidence=ISO]
[GO:0021986 "habenula development" evidence=IEA;ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=TAS] [GO:0031668
"cellular response to extracellular stimulus" evidence=IEA;ISO]
[GO:0033554 "cellular response to stress" evidence=IEA;ISO]
[GO:0042053 "regulation of dopamine metabolic process"
evidence=IEA;ISO] [GO:0042416 "dopamine biosynthetic process"
evidence=IEA;ISO] [GO:0042417 "dopamine metabolic process"
evidence=ISO] [GO:0042551 "neuron maturation" evidence=IEA;ISO]
[GO:0043085 "positive regulation of catalytic activity"
evidence=IEA;ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO;IDA] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IEA;ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0071542 "dopaminergic neuron
differentiation" evidence=ISO;ISS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003073 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284
PRINTS:PR01287 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:3202 GO:GO:0005634 GO:GO:0005737 GO:GO:0043085
GO:GO:0001764 GO:GO:0033554 GO:GO:0046872 GO:GO:0071542 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944
GO:GO:0008344 GO:GO:0001975 GO:GO:0043524 GO:GO:0009791 GO:GO:0010035
GO:GO:0042416 GO:GO:0021952 GO:GO:0042053 GO:GO:0016265 GO:GO:0043576
GO:GO:0017085 GO:GO:0042551 eggNOG:NOG245120 KO:K08558
GeneTree:ENSGT00640000091364 GO:GO:0021986 HOGENOM:HOG000230925
HOVERGEN:HBG052663 CTD:4929 OrthoDB:EOG40CHGK EMBL:U01146 EMBL:L08595
EMBL:U72345 IPI:IPI00325635 PIR:I84692 RefSeq:NP_062201.2
UniGene:Rn.88129 ProteinModelPortal:Q07917 SMR:Q07917 STRING:Q07917
PhosphoSite:Q07917 PRIDE:Q07917 Ensembl:ENSRNOT00000041394
GeneID:54278 KEGG:rno:54278 InParanoid:Q07917 NextBio:610844
ArrayExpress:Q07917 Genevestigator:Q07917
GermOnline:ENSRNOG00000005600 Uniprot:Q07917
Length = 598
Score = 355 (130.0 bits), Expect = 7.2e-67, Sum P(2) = 7.2e-67
Identities = 72/101 (71%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
DT P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 245 DTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 304
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 305 CPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRL 345
Score = 353 (129.3 bits), Expect = 7.2e-67, Sum P(2) = 7.2e-67
Identities = 68/115 (59%), Positives = 91/115 (79%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPV 458
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG+ W+++I+EF +L M IDISAF+C+ AL ++
Sbjct: 459 EGKLIFCNGVVLHRLQCVRGFGE-WIDSIVEFSSNLQNMNIDISAFSCIAALAMV 512
Score = 163 (62.4 bits), Expect = 7.1e-47, Sum P(2) = 7.1e-47
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF-----YREPNP 214
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF YR NP
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS-NP 457
Query: 215 LE 216
+E
Sbjct: 458 VE 459
>UNIPROTKB|E2RBX8 [details] [associations]
symbol:NR4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043576
"regulation of respiratory gaseous exchange" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043085 "positive regulation of catalytic
activity" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0042416 "dopamine biosynthetic process"
evidence=IEA] [GO:0042053 "regulation of dopamine metabolic
process" evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0031668 "cellular response to extracellular
stimulus" evidence=IEA] [GO:0021986 "habenula development"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001975 "response to amphetamine" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001666 "response
to hypoxia" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0043085 GO:GO:0001764 GO:GO:0033554 GO:GO:0046872
GO:GO:0071542 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0001666 GO:GO:0045944 GO:GO:0008344 GO:GO:0001975
GO:GO:0043524 GO:GO:0009791 GO:GO:0042416 GO:GO:0021952
GO:GO:0042053 GO:GO:0016265 GO:GO:0030522 GO:GO:0043576
GO:GO:0042551 GeneTree:ENSGT00640000091364 GO:GO:0021986
OMA:MWEDPGS EMBL:AAEX03017669 Ensembl:ENSCAFT00000014654
NextBio:20854035 Uniprot:E2RBX8
Length = 609
Score = 355 (130.0 bits), Expect = 8.6e-67, Sum P(2) = 8.6e-67
Identities = 72/101 (71%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
DT P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 256 DTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 315
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 316 CPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRL 356
Score = 353 (129.3 bits), Expect = 8.6e-67, Sum P(2) = 8.6e-67
Identities = 68/115 (59%), Positives = 91/115 (79%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 410 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPV 469
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG+ W+++I+EF +L M IDISAF+C+ AL ++
Sbjct: 470 EGKLIFCNGVVLHRLQCVRGFGE-WIDSIVEFSSNLQNMNIDISAFSCIAALAMV 523
Score = 163 (62.4 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF-----YREPNP 214
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF YR NP
Sbjct: 410 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS-NP 468
Query: 215 LE 216
+E
Sbjct: 469 VE 470
>UNIPROTKB|F5H4G9 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 OMA:MWEDPGS EMBL:AC074099 HGNC:HGNC:7981
ChiTaRS:NR4A2 IPI:IPI00018033 ProteinModelPortal:F5H4G9 SMR:F5H4G9
Ensembl:ENST00000539077 ArrayExpress:F5H4G9 Bgee:F5H4G9
Uniprot:F5H4G9
Length = 609
Score = 355 (130.0 bits), Expect = 8.6e-67, Sum P(2) = 8.6e-67
Identities = 72/101 (71%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
DT P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 256 DTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 315
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 316 CPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRL 356
Score = 353 (129.3 bits), Expect = 8.6e-67, Sum P(2) = 8.6e-67
Identities = 68/115 (59%), Positives = 91/115 (79%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 410 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPV 469
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG+ W+++I+EF +L M IDISAF+C+ AL ++
Sbjct: 470 EGKLIFCNGVVLHRLQCVRGFGE-WIDSIVEFSSNLQNMNIDISAFSCIAALAMV 523
Score = 163 (62.4 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF-----YREPNP 214
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF YR NP
Sbjct: 410 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS-NP 468
Query: 215 LE 216
+E
Sbjct: 469 VE 470
>UNIPROTKB|E1C6K9 [details] [associations]
symbol:NR4A2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001975 "response to amphetamine"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0016265 "death"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0021986 "habenula development"
evidence=IEA] [GO:0031668 "cellular response to extracellular
stimulus" evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0042053 "regulation of dopamine metabolic
process" evidence=IEA] [GO:0042416 "dopamine biosynthetic process"
evidence=IEA] [GO:0042551 "neuron maturation" evidence=IEA]
[GO:0043085 "positive regulation of catalytic activity"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0043085 GO:GO:0033554 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944
GO:GO:0001975 GO:GO:0043524 GO:GO:0042416 GO:GO:0042053
GO:GO:0016265 GO:GO:0030522 GO:GO:0043576 KO:K08558
GeneTree:ENSGT00640000091364 CTD:4929 OMA:MWEDPGS EMBL:AADN02017061
IPI:IPI00579183 RefSeq:XP_422166.2 Ensembl:ENSGALT00000020478
GeneID:424320 KEGG:gga:424320 NextBio:20826667 Uniprot:E1C6K9
Length = 598
Score = 353 (129.3 bits), Expect = 2.0e-66, Sum P(2) = 2.0e-66
Identities = 68/115 (59%), Positives = 91/115 (79%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFTDLPKTDQDLLFESAFLELFVLRLAYRSNPV 458
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG+ W+++I+EF +L M IDISAF+C+ AL ++
Sbjct: 459 EGKLIFCNGVVLHRLQCVRGFGE-WIDSIVEFSSNLQNMNIDISAFSCIAALAMV 512
Score = 351 (128.6 bits), Expect = 2.0e-66, Sum P(2) = 2.0e-66
Identities = 71/101 (70%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
D+ P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 245 DSQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 304
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 305 CPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRL 345
Score = 163 (62.4 bits), Expect = 2.1e-46, Sum P(2) = 2.1e-46
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF-----YREPNP 214
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF YR NP
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFTDLPKTDQDLLFESAFLELFVLRLAYRS-NP 457
Query: 215 LE 216
+E
Sbjct: 458 VE 459
>ZFIN|ZDB-GENE-990415-184 [details] [associations]
symbol:nr4a2a "nuclear receptor subfamily 4, group
A, member 2a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP] [GO:0021953 "central nervous system
neuron differentiation" evidence=IGI] [GO:0021884 "forebrain neuron
development" evidence=IMP] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003073
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-990415-184 GO:GO:0005634 GO:GO:0046872 GO:GO:0071542
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GO:GO:0021884 GeneTree:ENSGT00640000091364 EMBL:CU179638
IPI:IPI00932496 ProteinModelPortal:F1RER4
Ensembl:ENSDART00000109954 Bgee:F1RER4 Uniprot:F1RER4
Length = 635
Score = 354 (129.7 bits), Expect = 8.9e-66, Sum P(2) = 8.9e-66
Identities = 67/115 (58%), Positives = 92/115 (80%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 436 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFTDLPKPDQDLLFESAFLELFVLRLAYRSNPM 495
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
++KLIFCNGVVL + QC R FG+ W+++I+EF +L M +DISAF+C+ AL ++
Sbjct: 496 ESKLIFCNGVVLHRLQCVRGFGE-WIDSIVEFSSNLQNMNLDISAFSCIAALAMV 549
Score = 346 (126.9 bits), Expect = 8.9e-66, Sum P(2) = 8.9e-66
Identities = 70/101 (69%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
D+ P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 282 DSQVPSPPSRGSPSTEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 341
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTD+LKGRRGRL
Sbjct: 342 CPVDKRRRNRCQYCRFQKCLVVGMVKEVVRTDNLKGRRGRL 382
Score = 164 (62.8 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF-----YREPNP 214
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF YR NP
Sbjct: 436 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFTDLPKPDQDLLFESAFLELFVLRLAYRS-NP 494
Query: 215 LE 216
+E
Sbjct: 495 ME 496
>ZFIN|ZDB-GENE-040718-103 [details] [associations]
symbol:nr4a2b "nuclear receptor subfamily 4, group
A, member 2b" species:7955 "Danio rerio" [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021953 "central nervous system neuron differentiation"
evidence=IMP] [GO:0021884 "forebrain neuron development"
evidence=IMP] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040718-103 GO:GO:0005634 GO:GO:0046872 GO:GO:0071542
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GO:GO:0021884 eggNOG:NOG245120 KO:K08558 HOGENOM:HOG000230925
HOVERGEN:HBG052663 EMBL:BC076176 IPI:IPI00833876
RefSeq:NP_001002406.1 UniGene:Dr.12803 ProteinModelPortal:Q6DH08
SMR:Q6DH08 STRING:Q6DH08 GeneID:436679 KEGG:dre:436679 CTD:436679
InParanoid:Q6DH08 NextBio:20831122 ArrayExpress:Q6DH08
Uniprot:Q6DH08
Length = 586
Score = 352 (129.0 bits), Expect = 1.7e-64, Sum P(2) = 1.7e-64
Identities = 67/111 (60%), Positives = 89/111 (80%)
Query: 225 IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKL 284
IQQFY LLT S+ +IR +A+KIPGF++L K DQELLF+SA LELFVLRLAYR+ + KL
Sbjct: 398 IQQFYDLLTASMSIIRGWAEKIPGFTELPKCDQELLFESAFLELFVLRLAYRSNLPEDKL 457
Query: 285 IFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
IFCNG+VL K QC R FG+ W+++I+EF +L M +D+SAF+C+ ALT++
Sbjct: 458 IFCNGMVLHKLQCVRGFGE-WIDSIVEFSSNLQSMSLDVSAFSCIAALTIV 507
Score = 333 (122.3 bits), Expect = 1.7e-64, Sum P(2) = 1.7e-64
Identities = 65/89 (73%), Positives = 67/89 (75%)
Query: 37 PSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXX 96
PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K CPVD
Sbjct: 252 PSSEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQ 311
Query: 97 XXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CL VGMVKEVVRT SLKGRRGRL
Sbjct: 312 YCRFQKCLVVGMVKEVVRTASLKGRRGRL 340
Score = 152 (58.6 bits), Expect = 2.8e-43, Sum P(2) = 2.8e-43
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 164 IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF 208
IQQFY LLT S+ +IR +A+KIPGF++L K DQELLF+SA LELF
Sbjct: 398 IQQFYDLLTASMSIIRGWAEKIPGFTELPKCDQELLFESAFLELF 442
>UNIPROTKB|E1B7S6 [details] [associations]
symbol:NR4A3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000108 "positive regulation of leukocyte apoptotic
process" evidence=IEA] [GO:0060005 "vestibular reflex"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0045787 "positive regulation of
cell cycle" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA] [GO:0033554 "cellular response to
stress" evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0001707 "mesoderm formation"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003072 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007411 GO:GO:0021766
GO:GO:0033554 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0050885 GO:GO:0043524 GO:GO:0005667
GO:GO:0001077 GO:GO:0001707 GO:GO:0030534 GO:GO:0030522
GO:GO:0045787 GO:GO:0048752 GeneTree:ENSGT00640000091364
OMA:PSTSMYF GO:GO:2000108 GO:GO:0060005 EMBL:DAAA02023278
EMBL:DAAA02023279 IPI:IPI00701881 Ensembl:ENSBTAT00000002429
Uniprot:E1B7S6
Length = 637
Score = 344 (126.2 bits), Expect = 2.8e-63, Sum P(2) = 2.8e-63
Identities = 70/103 (67%), Positives = 73/103 (70%)
Query: 28 GCDTSRPTPPSPSQL-----CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAD 82
G S P+PPS S CAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+
Sbjct: 283 GESPSLPSPPSRSSASGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLAN 342
Query: 83 KACPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
K CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 343 KNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRL 385
Score = 333 (122.3 bits), Expect = 2.8e-63, Sum P(2) = 2.8e-63
Identities = 69/139 (49%), Positives = 94/139 (67%)
Query: 199 LFQSASLELFYREPNPLEPPIA--EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKED 256
L S +L Y P + A + E +QQFY+LLT S+DV R +A+KIPGF+DL KED
Sbjct: 417 LTDSTPRDLDYSRYCPTDQAAAGTDAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKED 476
Query: 257 QELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSL 316
Q LL +SA LELFVLRL+ R+ + K +FCNG+VL + QC R FG+ WL++I +F SL
Sbjct: 477 QTLLIESAFLELFVLRLSIRSNTAEDKFVFCNGLVLHRLQCLRGFGE-WLDSIKDFSLSL 535
Query: 317 HLMEIDISAFACLCALTLI 335
+ +DI A ACL AL+++
Sbjct: 536 QSLNLDIQALACLSALSMV 554
Score = 165 (63.1 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 44/112 (39%), Positives = 63/112 (56%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
+ E +QQFY+LLT S+DV R +A+KIPGF+DL KEDQ LL +SA LELF + +
Sbjct: 441 DAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLS-IRSNT 499
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVL 271
AE +K L+ + +R F + + D L QS +L++ L
Sbjct: 500 AE-DKFVFCNGLVLHRLQCLRGFGEWLDSIKDF-----SLSLQSLNLDIQAL 545
Score = 41 (19.5 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 30 DTSRPTPPSPSQLC 43
+ S+P+PPSP +C
Sbjct: 396 EASQPSPPSPP-IC 408
>UNIPROTKB|Q92570 [details] [associations]
symbol:NR4A3 "Nuclear receptor subfamily 4 group A member
3" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001707 "mesoderm formation" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
[GO:0031100 "organ regeneration" evidence=IEA] [GO:0033554
"cellular response to stress" evidence=IEA] [GO:0043434 "response
to peptide hormone stimulus" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045787 "positive
regulation of cell cycle" evidence=IEA] [GO:0048752 "semicircular
canal morphogenesis" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0060005 "vestibular
reflex" evidence=IEA] [GO:2000108 "positive regulation of leukocyte
apoptotic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0004887 "thyroid
hormone receptor activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003072 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007411 GO:GO:0021766
GO:GO:0005654 GO:GO:0033554 GO:GO:0046872 GO:GO:0003677
GO:GO:0031100 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0043434
GO:GO:0050885 GO:GO:0043524 GO:GO:0005667 GO:GO:0001077
EMBL:CH471105 GO:GO:0001707 GO:GO:0030534 GO:GO:0006367
GO:GO:0045787 GO:GO:0004887 GO:GO:0048752 MIM:612219 EMBL:AL358937
eggNOG:NOG245120 HOVERGEN:HBG052663 EMBL:D78579 EMBL:U12767
EMBL:S81243 EMBL:X89894 EMBL:AL359710 EMBL:D85241 EMBL:D85242
IPI:IPI00293038 IPI:IPI00328269 IPI:IPI00334557 PIR:S71930
RefSeq:NP_008912.2 RefSeq:NP_775291.1 RefSeq:NP_775292.1
UniGene:Hs.279522 ProteinModelPortal:Q92570 SMR:Q92570
STRING:Q92570 PhosphoSite:Q92570 DMDM:90110039 PaxDb:Q92570
PRIDE:Q92570 DNASU:8013 Ensembl:ENST00000330847
Ensembl:ENST00000338488 Ensembl:ENST00000395097 GeneID:8013
KEGG:hsa:8013 UCSC:uc004bae.3 UCSC:uc004baf.1 UCSC:uc022bky.1
CTD:8013 GeneCards:GC09P102584 HGNC:HGNC:7982 HPA:HPA043360
MIM:600542 neXtProt:NX_Q92570 PharmGKB:PA31763 InParanoid:Q92570
KO:K08559 OMA:PSTSMYF OrthoDB:EOG4894MB ChEMBL:CHEMBL1961792
ChiTaRS:NR4A3 GenomeRNAi:8013 NextBio:30567 ArrayExpress:Q92570
Bgee:Q92570 CleanEx:HS_NR4A3 CleanEx:HS_TEC Genevestigator:Q92570
GermOnline:ENSG00000119508 GO:GO:2000108 GO:GO:0060005
Uniprot:Q92570
Length = 626
Score = 344 (126.2 bits), Expect = 4.0e-63, Sum P(2) = 4.0e-63
Identities = 70/103 (67%), Positives = 73/103 (70%)
Query: 28 GCDTSRPTPPSPSQ-----LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAD 82
G S P+PPS S CAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+
Sbjct: 272 GESPSLPSPPSRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLAN 331
Query: 83 KACPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
K CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 332 KNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRL 374
Score = 331 (121.6 bits), Expect = 4.0e-63, Sum P(2) = 4.0e-63
Identities = 69/139 (49%), Positives = 94/139 (67%)
Query: 199 LFQSASLELFYREPNPLEPPIA--EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKED 256
L S +L Y P + A + E +QQFY+LLT S+DV R +A+KIPGF+DL KED
Sbjct: 406 LTDSTPRDLDYSRYCPTDQAAAGTDAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKED 465
Query: 257 QELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSL 316
Q LL +SA LELFVLRL+ R+ + K +FCNG+VL + QC R FG+ WL++I +F +L
Sbjct: 466 QTLLIESAFLELFVLRLSIRSNTAEDKFVFCNGLVLHRLQCLRGFGE-WLDSIKDFSLNL 524
Query: 317 HLMEIDISAFACLCALTLI 335
+ +DI A ACL AL++I
Sbjct: 525 QSLNLDIQALACLSALSMI 543
Score = 164 (62.8 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 41/100 (41%), Positives = 57/100 (57%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
+ E +QQFY+LLT S+DV R +A+KIPGF+DL KEDQ LL +SA LELF + +
Sbjct: 430 DAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLS-IRSNT 488
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQEL 259
AE +K L+ + +R F + + D Q L
Sbjct: 489 AE-DKFVFCNGLVLHRLQCLRGFGEWLDSIKDFSLNLQSL 527
Score = 40 (19.1 bits), Expect = 4.4e-31, Sum P(2) = 4.4e-31
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 30 DTSRPTPPSPSQLC 43
+ S+P+PPSP +C
Sbjct: 385 EPSQPSPPSPP-IC 397
>MGI|MGI:1352457 [details] [associations]
symbol:Nr4a3 "nuclear receptor subfamily 4, group A, member
3" species:10090 "Mus musculus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0001707 "mesoderm formation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IMP] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IMP] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045787 "positive regulation of cell
cycle" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048752
"semicircular canal morphogenesis" evidence=IMP] [GO:0050885
"neuromuscular process controlling balance" evidence=IMP]
[GO:0060005 "vestibular reflex" evidence=IMP] [GO:2000108 "positive
regulation of leukocyte apoptotic process" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003072 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352457
GO:GO:0007411 GO:GO:0021766 GO:GO:0033554 GO:GO:0046872
GO:GO:0031100 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0043434 GO:GO:0050885 GO:GO:0043524 GO:GO:0005667
GO:GO:0001077 GO:GO:0001707 GO:GO:0030534 GO:GO:0030522
GO:GO:0045787 GO:GO:0048752 eggNOG:NOG245120
GeneTree:ENSGT00640000091364 HOGENOM:HOG000230925
HOVERGEN:HBG052663 CTD:8013 KO:K08559 OrthoDB:EOG4894MB
GO:GO:2000108 GO:GO:0060005 EMBL:AF191211 EMBL:AF191212
IPI:IPI00137203 IPI:IPI00410918 RefSeq:NP_056558.1
UniGene:Mm.247261 UniGene:Mm.487935 ProteinModelPortal:Q9QZB6
SMR:Q9QZB6 STRING:Q9QZB6 PhosphoSite:Q9QZB6 PRIDE:Q9QZB6
DNASU:18124 Ensembl:ENSMUST00000030025 GeneID:18124 KEGG:mmu:18124
UCSC:uc008suv.1 InParanoid:Q9QZB6 NextBio:293340 Bgee:Q9QZB6
CleanEx:MM_NR4A3 Genevestigator:Q9QZB6
GermOnline:ENSMUSG00000028341 Uniprot:Q9QZB6
Length = 627
Score = 341 (125.1 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 69/103 (66%), Positives = 73/103 (70%)
Query: 28 GCDTSRPTPPSPSQ-----LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAD 82
G S P+PP+ S CAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+
Sbjct: 273 GESPSLPSPPNRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLAN 332
Query: 83 KACPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
K CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 333 KNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRL 375
Score = 328 (120.5 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 67/132 (50%), Positives = 92/132 (69%)
Query: 206 ELFYREPNPLEPPIA--EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQS 263
+L Y P + A + E +QQFY+LLT S+DV R +A+KIPGF+DL KEDQ LL +S
Sbjct: 414 DLDYSRYCPTDQATAGTDAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIES 473
Query: 264 ASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDI 323
A LELFVLRL+ R+ + K +FCNG+VL + QC R FG+ WL++I +F +L + +DI
Sbjct: 474 AFLELFVLRLSIRSNTAEDKFVFCNGLVLHRLQCLRGFGE-WLDSIKDFSLNLQSLNLDI 532
Query: 324 SAFACLCALTLI 335
A ACL AL++I
Sbjct: 533 QALACLSALSMI 544
Score = 164 (62.8 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 41/100 (41%), Positives = 57/100 (57%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
+ E +QQFY+LLT S+DV R +A+KIPGF+DL KEDQ LL +SA LELF + +
Sbjct: 431 DAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLS-IRSNT 489
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQEL 259
AE +K L+ + +R F + + D Q L
Sbjct: 490 AE-DKFVFCNGLVLHRLQCLRGFGEWLDSIKDFSLNLQSL 528
Score = 40 (19.1 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 30 DTSRPTPPSPSQLC 43
+ S+P+PPSP +C
Sbjct: 386 EPSQPSPPSPP-IC 398
>RGD|61882 [details] [associations]
symbol:Nr4a3 "nuclear receptor subfamily 4, group A, member 3"
species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA;ISO] [GO:0001707 "mesoderm formation"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0007411 "axon
guidance" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0030534 "adult behavior" evidence=IEA;ISO]
[GO:0031100 "organ regeneration" evidence=IEP] [GO:0033554 "cellular
response to stress" evidence=IEA;ISO] [GO:0042472 "inner ear
morphogenesis" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO] [GO:0043434 "response to peptide
hormone stimulus" evidence=IEP] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045787
"positive regulation of cell cycle" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA;ISO] [GO:0060005 "vestibular
reflex" evidence=IEA;ISO] [GO:2000108 "positive regulation of
leukocyte apoptotic process" evidence=IEA;ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003072 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:61882 GO:GO:0007411 GO:GO:0021766
GO:GO:0033554 GO:GO:0046872 GO:GO:0003677 GO:GO:0031100
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0043434
GO:GO:0050885 GO:GO:0043524 GO:GO:0005667 GO:GO:0001077
GO:GO:0001707 GO:GO:0030534 GO:GO:0030522 GO:GO:0045787
GO:GO:0048752 eggNOG:NOG245120 GeneTree:ENSGT00640000091364
HOGENOM:HOG000230925 HOVERGEN:HBG052663 CTD:8013 KO:K08559
OMA:PSTSMYF OrthoDB:EOG4894MB GO:GO:2000108 GO:GO:0060005
EMBL:D38530 EMBL:X86003 EMBL:DQ268830 EMBL:L19343 IPI:IPI00199318
IPI:IPI00411258 PIR:JC2493 PIR:S66671 RefSeq:NP_113816.1
UniGene:Rn.62694 ProteinModelPortal:P51179 SMR:P51179 STRING:P51179
PhosphoSite:P51179 Ensembl:ENSRNOT00000008302 GeneID:58853
KEGG:rno:58853 UCSC:RGD:61882 InParanoid:P51179 NextBio:611439
ArrayExpress:P51179 Genevestigator:P51179
GermOnline:ENSRNOG00000005964 Uniprot:P51179
Length = 628
Score = 341 (125.1 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 69/103 (66%), Positives = 73/103 (70%)
Query: 28 GCDTSRPTPPSPSQ-----LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAD 82
G S P+PP+ S CAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+
Sbjct: 274 GESPSLPSPPNRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLAN 333
Query: 83 KACPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
K CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 334 KNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRL 376
Score = 328 (120.5 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 67/132 (50%), Positives = 92/132 (69%)
Query: 206 ELFYREPNPLEPPIA--EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQS 263
+L Y P + A + E +QQFY+LLT S+DV R +A+KIPGF+DL KEDQ LL +S
Sbjct: 415 DLDYSRYCPTDQATAGTDAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIES 474
Query: 264 ASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDI 323
A LELFVLRL+ R+ + K +FCNG+VL + QC R FG+ WL++I +F +L + +DI
Sbjct: 475 AFLELFVLRLSIRSNTAEDKFVFCNGLVLHRLQCLRGFGE-WLDSIKDFSLNLQSLNLDI 533
Query: 324 SAFACLCALTLI 335
A ACL AL++I
Sbjct: 534 QALACLSALSMI 545
Score = 166 (63.5 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 50/144 (34%), Positives = 73/144 (50%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
+ E +QQFY+LLT S+DV R +A+KIPGF+DL KEDQ LL +SA LELF + +
Sbjct: 432 DAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLS-IRSNT 490
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE-LFVLRL-AYRT 277
AE +K L+ + +R F + + D Q L +L L L + R
Sbjct: 491 AE-DKFVFCNGLVLHRLQCLRGFGEWLDSIKDFSLNLQSLNLDIQALACLSALSMITERH 549
Query: 278 RAEDTKLI--FCNGVVLEKQQCQR 299
++ K + CN + + QR
Sbjct: 550 GLKEPKRVEELCNKITSSLKDHQR 573
Score = 40 (19.1 bits), Expect = 9.8e-31, Sum P(2) = 9.8e-31
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 30 DTSRPTPPSPSQLC 43
+ S+P+PPSP +C
Sbjct: 387 EPSQPSPPSPP-IC 399
>UNIPROTKB|P51179 [details] [associations]
symbol:Nr4a3 "Nuclear receptor subfamily 4 group A member
3" species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001707 "mesoderm formation"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0048752 "semicircular canal morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0060005 "vestibular reflex"
evidence=IEA] [GO:2000108 "positive regulation of leukocyte
apoptotic process" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003072 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:61882 GO:GO:0007411 GO:GO:0021766
GO:GO:0033554 GO:GO:0046872 GO:GO:0003677 GO:GO:0031100
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0043434
GO:GO:0050885 GO:GO:0043524 GO:GO:0005667 GO:GO:0001077
GO:GO:0001707 GO:GO:0030534 GO:GO:0030522 GO:GO:0045787
GO:GO:0048752 eggNOG:NOG245120 GeneTree:ENSGT00640000091364
HOGENOM:HOG000230925 HOVERGEN:HBG052663 CTD:8013 KO:K08559
OMA:PSTSMYF OrthoDB:EOG4894MB GO:GO:2000108 GO:GO:0060005
EMBL:D38530 EMBL:X86003 EMBL:DQ268830 EMBL:L19343 IPI:IPI00199318
IPI:IPI00411258 PIR:JC2493 PIR:S66671 RefSeq:NP_113816.1
UniGene:Rn.62694 ProteinModelPortal:P51179 SMR:P51179 STRING:P51179
PhosphoSite:P51179 Ensembl:ENSRNOT00000008302 GeneID:58853
KEGG:rno:58853 UCSC:RGD:61882 InParanoid:P51179 NextBio:611439
ArrayExpress:P51179 Genevestigator:P51179
GermOnline:ENSRNOG00000005964 Uniprot:P51179
Length = 628
Score = 341 (125.1 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 69/103 (66%), Positives = 73/103 (70%)
Query: 28 GCDTSRPTPPSPSQ-----LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAD 82
G S P+PP+ S CAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+
Sbjct: 274 GESPSLPSPPNRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLAN 333
Query: 83 KACPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
K CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 334 KNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRL 376
Score = 328 (120.5 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 67/132 (50%), Positives = 92/132 (69%)
Query: 206 ELFYREPNPLEPPIA--EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQS 263
+L Y P + A + E +QQFY+LLT S+DV R +A+KIPGF+DL KEDQ LL +S
Sbjct: 415 DLDYSRYCPTDQATAGTDAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIES 474
Query: 264 ASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDI 323
A LELFVLRL+ R+ + K +FCNG+VL + QC R FG+ WL++I +F +L + +DI
Sbjct: 475 AFLELFVLRLSIRSNTAEDKFVFCNGLVLHRLQCLRGFGE-WLDSIKDFSLNLQSLNLDI 533
Query: 324 SAFACLCALTLI 335
A ACL AL++I
Sbjct: 534 QALACLSALSMI 545
Score = 166 (63.5 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 50/144 (34%), Positives = 73/144 (50%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
+ E +QQFY+LLT S+DV R +A+KIPGF+DL KEDQ LL +SA LELF + +
Sbjct: 432 DAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLS-IRSNT 490
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE-LFVLRL-AYRT 277
AE +K L+ + +R F + + D Q L +L L L + R
Sbjct: 491 AE-DKFVFCNGLVLHRLQCLRGFGEWLDSIKDFSLNLQSLNLDIQALACLSALSMITERH 549
Query: 278 RAEDTKLI--FCNGVVLEKQQCQR 299
++ K + CN + + QR
Sbjct: 550 GLKEPKRVEELCNKITSSLKDHQR 573
Score = 40 (19.1 bits), Expect = 9.8e-31, Sum P(2) = 9.8e-31
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 30 DTSRPTPPSPSQLC 43
+ S+P+PPSP +C
Sbjct: 387 EPSQPSPPSPP-IC 399
>UNIPROTKB|O97726 [details] [associations]
symbol:NOR-1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000108 "positive regulation of leukocyte apoptotic
process" evidence=IEA] [GO:0060005 "vestibular reflex"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0045787 "positive regulation of
cell cycle" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA] [GO:0033554 "cellular response to
stress" evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0001707 "mesoderm formation"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003072 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007411 GO:GO:0021766
GO:GO:0033554 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0050885 GO:GO:0043524 GO:GO:0005667
GO:GO:0001077 GO:GO:0001707 GO:GO:0030534 GO:GO:0030522
GO:GO:0045787 GO:GO:0048752 eggNOG:NOG245120
GeneTree:ENSGT00640000091364 HOGENOM:HOG000230925
HOVERGEN:HBG052663 HSSP:P43354 KO:K08559 OMA:PSTSMYF
OrthoDB:EOG4894MB GO:GO:2000108 GO:GO:0060005 EMBL:CU302447
EMBL:CU210903 EMBL:AJ011767 RefSeq:NP_999412.1 UniGene:Ssc.761
SMR:O97726 STRING:O97726 Ensembl:ENSSSCT00000005925 GeneID:397479
KEGG:ssc:397479 CTD:397479 Uniprot:O97726
Length = 643
Score = 340 (124.7 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 69/103 (66%), Positives = 73/103 (70%)
Query: 28 GCDTSRPTPPSPSQL-----CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAD 82
G S P+PP+ S CAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+
Sbjct: 289 GESPSLPSPPNRSTASGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLAN 348
Query: 83 KACPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
K CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 349 KNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRL 391
Score = 329 (120.9 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 69/139 (49%), Positives = 93/139 (66%)
Query: 199 LFQSASLELFYREPNPLEPPIA--EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKED 256
L S +L Y P + A + E +QQFY+LLT S+DV R +A+KIPGF+DL KED
Sbjct: 423 LTDSTPRDLDYSRYCPADQAAAGTDAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKED 482
Query: 257 QELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSL 316
Q LL +SA LELFVLRL+ R+ + K +FCNG+VL + QC R FG+ WL++I +F L
Sbjct: 483 QTLLIESAFLELFVLRLSIRSNTAEDKFVFCNGLVLHRLQCLRGFGE-WLDSIKDFSLRL 541
Query: 317 HLMEIDISAFACLCALTLI 335
+ +DI A ACL AL++I
Sbjct: 542 QSLNLDIQALACLSALSMI 560
Score = 165 (63.1 bits), Expect = 4.1e-45, Sum P(2) = 4.1e-45
Identities = 44/112 (39%), Positives = 63/112 (56%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
+ E +QQFY+LLT S+DV R +A+KIPGF+DL KEDQ LL +SA LELF + +
Sbjct: 447 DAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLS-IRSNT 505
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVL 271
AE +K L+ + +R F + + D L QS +L++ L
Sbjct: 506 AE-DKFVFCNGLVLHRLQCLRGFGEWLDSIKDF-----SLRLQSLNLDIQAL 551
Score = 39 (18.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 30 DTSRPTPPSP 39
+ S+P+PPSP
Sbjct: 402 EPSQPSPPSP 411
>UNIPROTKB|E1BYS2 [details] [associations]
symbol:NR4A3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001707 "mesoderm formation" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0050885 "neuromuscular process controlling balance"
evidence=IEA] [GO:0060005 "vestibular reflex" evidence=IEA]
[GO:2000108 "positive regulation of leukocyte apoptotic process"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003072
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01286
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0033554 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0043524 GO:GO:0005667 GO:GO:0001077
GO:GO:0030522 GO:GO:0045787 GeneTree:ENSGT00640000091364 CTD:8013
KO:K08559 OMA:PSTSMYF GO:GO:2000108 GO:GO:0060005 EMBL:AC140790
IPI:IPI00599268 RefSeq:XP_419081.3 UniGene:Gga.33742
Ensembl:ENSGALT00000022087 GeneID:420996 KEGG:gga:420996
Uniprot:E1BYS2
Length = 609
Score = 341 (125.1 bits), Expect = 3.4e-61, Sum P(2) = 3.4e-61
Identities = 68/97 (70%), Positives = 71/97 (73%)
Query: 34 PTPPSPSQ-----LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVD 88
P+PPS S CAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K CPVD
Sbjct: 256 PSPPSRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVD 315
Query: 89 XXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 316 KRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRL 352
Score = 315 (115.9 bits), Expect = 3.4e-61, Sum P(2) = 3.4e-61
Identities = 62/115 (53%), Positives = 85/115 (73%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ E +QQFY+LLT S+D+ R +A+KIPGF+DL KEDQ LL +SA LELFVLRL+ R+
Sbjct: 408 DAEHVQQFYNLLTASIDISRGWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSDTA 467
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ K +FCNG+VL + QC R FG+ WL++I +F +L + +DI A A L ALT+I
Sbjct: 468 EDKFVFCNGLVLHRLQCLRGFGE-WLDSIKDFSLNLKSLNLDIPALASLSALTMI 521
Score = 161 (61.7 bits), Expect = 5.4e-45, Sum P(2) = 5.4e-45
Identities = 38/92 (41%), Positives = 55/92 (59%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
+ E +QQFY+LLT S+D+ R +A+KIPGF+DL KEDQ LL +SA LELF + +
Sbjct: 408 DAEHVQQFYNLLTASIDISRGWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLS-IRSDT 466
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSD 251
AE +K L+ + +R F + + D
Sbjct: 467 AE-DKFVFCNGLVLHRLQCLRGFGEWLDSIKD 497
Score = 39 (18.8 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 30 DTSRPTPPSP 39
+ S+P+PPSP
Sbjct: 363 EPSQPSPPSP 372
>ZFIN|ZDB-GENE-070824-4 [details] [associations]
symbol:nr4a3 "nuclear receptor subfamily 4, group A,
member 3" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003073 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-070824-4 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 eggNOG:NOG245120 HOGENOM:HOG000230925
HOVERGEN:HBG052663 OrthoDB:EOG4894MB EMBL:DQ017611 IPI:IPI00510220
UniGene:Dr.76117 ProteinModelPortal:Q1L695 SMR:Q1L695
InParanoid:Q1L695 Uniprot:Q1L695
Length = 594
Score = 335 (123.0 bits), Expect = 4.5e-60, Sum P(2) = 4.5e-60
Identities = 66/98 (67%), Positives = 71/98 (72%)
Query: 32 SRPTPPSPSQ----LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPV 87
S P+PP+ + CAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA K CPV
Sbjct: 240 SLPSPPNRTSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLASKNCPV 299
Query: 88 DXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
D CL VGMVKEVVRTD+LKGRRGRL
Sbjct: 300 DKRRRNRCQYCRFQKCLSVGMVKEVVRTDNLKGRRGRL 337
Score = 310 (114.2 bits), Expect = 4.5e-60, Sum P(2) = 4.5e-60
Identities = 64/137 (46%), Positives = 94/137 (68%)
Query: 201 QSASLELFYRE-PNPLEPP-IAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQE 258
QS EL Y + + +EP ++E ++IQ FY +LT S++V R +A+++PGFS+L +DQ
Sbjct: 368 QSTPRELDYSQVTDAVEPVGLSESQQIQMFYRVLTGSMEVTRCWAERLPGFSELHHDDQN 427
Query: 259 LLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHL 318
+L SA LELFVLRLA R+ D K +FC G+VL + QC R FG+ WL++I +F L
Sbjct: 428 MLIDSAFLELFVLRLANRSLLVDEKFVFCTGLVLHRLQCLRGFGE-WLDSIRDFSAHLQE 486
Query: 319 MEIDISAFACLCALTLI 335
+ +D+ AF+CLCAL L+
Sbjct: 487 LNLDMPAFSCLCALVLL 503
Score = 138 (53.6 bits), Expect = 5.5e-42, Sum P(2) = 5.5e-42
Identities = 38/108 (35%), Positives = 59/108 (54%)
Query: 154 LEPP-IAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY-RE 211
+EP ++E ++IQ FY +LT S++V R +A+++PGFS+L +DQ +L SA LELF R
Sbjct: 383 VEPVGLSESQQIQMFYRVLTGSMEVTRCWAERLPGFSELHHDDQNMLIDSAFLELFVLRL 442
Query: 212 PNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQEL 259
N + EK L+ + +R F + + D QEL
Sbjct: 443 ANR---SLLVDEKFVFCTGLVLHRLQCLRGFGEWLDSIRDFSAHLQEL 487
Score = 38 (18.4 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 211 EPNPLEPPIAEPEKIQQFYSLLT 233
EP+P PP++ + + YS T
Sbjct: 348 EPSPPSPPLSLLNALVRAYSQST 370
>UNIPROTKB|E2RRN7 [details] [associations]
symbol:NR4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003073 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00640000091364 EMBL:AAEX03017669
Ensembl:ENSCAFT00000037480 Uniprot:E2RRN7
Length = 507
Score = 355 (130.0 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 72/101 (71%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
DT P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 245 DTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 304
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 305 CPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRL 345
Score = 192 (72.6 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 38/57 (66%), Positives = 49/57 (85%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRT 277
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS 455
Score = 163 (62.4 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF-----YREPNP 214
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF YR NP
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS-NP 457
Query: 215 LE 216
+E
Sbjct: 458 VE 459
>UNIPROTKB|C9J8W4 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000230925 EMBL:AC074099 HGNC:HGNC:7981 ChiTaRS:NR4A2
IPI:IPI00927888 ProteinModelPortal:C9J8W4 SMR:C9J8W4 STRING:C9J8W4
Ensembl:ENST00000429376 ArrayExpress:C9J8W4 Bgee:C9J8W4
Uniprot:C9J8W4
Length = 490
Score = 355 (130.0 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 72/101 (71%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
DT P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 182 DTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 241
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 242 CPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRL 282
Score = 192 (72.6 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 38/57 (66%), Positives = 49/57 (85%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRT 277
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 336 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS 392
Score = 163 (62.4 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF-----YREPNP 214
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF YR NP
Sbjct: 336 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS-NP 394
Query: 215 LE 216
+E
Sbjct: 395 VE 396
>UNIPROTKB|Q3LZI9 [details] [associations]
symbol:Nr4a2 "Nuclear receptor subfamily 4 group A member 2
variant NURR1c" species:10116 "Rattus norvegicus" [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003073
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 RGD:3202
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 HOGENOM:HOG000230925
HOVERGEN:HBG052663 UniGene:Rn.88129 EMBL:DQ092629 IPI:IPI00778010
SMR:Q3LZI9 STRING:Q3LZI9 Ensembl:ENSRNOT00000007799
Genevestigator:Q3LZI9 Uniprot:Q3LZI9
Length = 500
Score = 355 (130.0 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 72/101 (71%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
DT P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 245 DTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 304
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 305 CPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRL 345
Score = 192 (72.6 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 38/57 (66%), Positives = 49/57 (85%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRT 277
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS 455
Score = 163 (62.4 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF-----YREPNP 214
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF YR NP
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS-NP 457
Query: 215 LE 216
+E
Sbjct: 458 VE 459
>FB|FBgn0014859 [details] [associations]
symbol:Hr38 "Hormone receptor-like in 38" species:7227
"Drosophila melanogaster" [GO:0000977 "RNA polymerase II regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS] [GO:0005634
"nucleus" evidence=IEA;NAS] [GO:0008544 "epidermis development"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=IEA] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0042335 "cuticle development" evidence=IMP]
[GO:0048082 "regulation of adult chitin-containing cuticle
pigmentation" evidence=IGI] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0006911 EMBL:AE014134 GO:GO:0046872
GO:GO:0004879 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0042335 GO:GO:0000977
GO:GO:0048082 EMBL:X89246 EMBL:Y15606 EMBL:AJ002073 EMBL:U36762
RefSeq:NP_477119.1 UniGene:Dm.2701 PDB:1PDU PDBsum:1PDU
ProteinModelPortal:P49869 SMR:P49869 DIP:DIP-929N STRING:P49869
GeneID:35332 KEGG:dme:Dmel_CG1864 CTD:35332 FlyBase:FBgn0014859
eggNOG:NOG245120 HOGENOM:HOG000046504 InParanoid:P49869 KO:K08558
OrthoDB:EOG4SXKV7 EvolutionaryTrace:P49869 GenomeRNAi:35332
NextBio:793002 Bgee:P49869 GermOnline:CG1864 Uniprot:P49869
Length = 1073
Score = 539 (194.8 bits), Expect = 5.8e-51, P = 5.8e-51
Identities = 116/184 (63%), Positives = 126/184 (68%)
Query: 38 SPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXX 97
+PSQLCAVCGD AACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADK CPVD
Sbjct: 739 APSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQF 798
Query: 98 XXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYRE-----PN 152
CL VGMVKEVVRTDSLKGRRGRL LITAL R P+
Sbjct: 799 CRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITALVRSHVDTTPD 858
Query: 153 PL--------EPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSAS 204
P E ++E +K+QQFY LLT+SVDVI+ FA+KIPG+ DL EDQELLFQSAS
Sbjct: 859 PSCLDYSHYEEQSMSEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSAS 918
Query: 205 LELF 208
LELF
Sbjct: 919 LELF 922
Score = 450 (163.5 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 88/120 (73%), Positives = 102/120 (85%)
Query: 216 EPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAY 275
E ++E +K+QQFY LLT+SVDVI+ FA+KIPG+ DL EDQELLFQSASLELFVLRLAY
Sbjct: 869 EQSMSEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAY 928
Query: 276 RTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
R R +DTKLIFCNG VL + QC RSFG+ WLN I+EF +SLH +EIDISAFACLCALTLI
Sbjct: 929 RARIDDTKLIFCNGTVLHRTQCLRSFGE-WLNDIMEFSRSLHNLEIDISAFACLCALTLI 987
Score = 38 (18.4 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 21/80 (26%), Positives = 26/80 (32%)
Query: 154 LEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDL-CKEDQELLFQSASLELFYREP 212
L PP+ I +L D I H A S+ C D S F+
Sbjct: 84 LPPPLPTLPLIYPCRNLFPDGCD-INHLACCSSSNSNSNCNSDSNSTSSSPGNSHFFANG 142
Query: 213 NPLE------PPIAEPEKIQ 226
N PP EP KI+
Sbjct: 143 NTCAAALTPAPPATEPRKIK 162
>UNIPROTKB|E9PBQ4 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
EMBL:AC074099 HGNC:HGNC:7981 ChiTaRS:NR4A2 IPI:IPI00924923
SMR:E9PBQ4 Ensembl:ENST00000417764 Ensembl:ENST00000417972
Uniprot:E9PBQ4
Length = 392
Score = 355 (130.0 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 72/101 (71%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
DT P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 182 DTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 241
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 242 CPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRL 282
Score = 191 (72.3 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 38/56 (67%), Positives = 48/56 (85%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYR 276
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR
Sbjct: 336 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYR 391
Score = 158 (60.7 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 31/49 (63%), Positives = 41/49 (83%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF 208
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF
Sbjct: 336 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELF 384
>UNIPROTKB|F8W6I3 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
EMBL:AC074099 HGNC:HGNC:7981 ChiTaRS:NR4A2 IPI:IPI00917128
ProteinModelPortal:F8W6I3 SMR:F8W6I3 Ensembl:ENST00000409108
ArrayExpress:F8W6I3 Bgee:F8W6I3 Uniprot:F8W6I3
Length = 553
Score = 355 (130.0 bits), Expect = 2.4e-50, Sum P(2) = 2.4e-50
Identities = 72/101 (71%), Positives = 75/101 (74%)
Query: 30 DTSRPTPPS---PSQ--LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
DT P+PPS PS LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K
Sbjct: 245 DTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN 304
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 305 CPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRL 345
Score = 192 (72.6 bits), Expect = 2.4e-50, Sum P(2) = 2.4e-50
Identities = 38/57 (66%), Positives = 49/57 (85%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRT 277
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS 455
Score = 163 (62.4 bits), Expect = 2.7e-47, Sum P(2) = 2.7e-47
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF-----YREPNP 214
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELF YR NP
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS-NP 457
Query: 215 LE 216
+E
Sbjct: 458 VE 459
>RGD|620029 [details] [associations]
symbol:Nr4a1 "nuclear receptor subfamily 4, group A, member 1"
species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA;ISO] [GO:0001938 "positive regulation
of endothelial cell proliferation" evidence=IEA;ISO] [GO:0002042
"cell migration involved in sprouting angiogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0006915 "apoptotic process"
evidence=ISO] [GO:0006917 "induction of apoptosis"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0035767 "endothelial cell chemotaxis" evidence=IEA;ISO]
[GO:0035914 "skeletal muscle cell differentiation" evidence=ISO]
[GO:0035924 "cellular response to vascular endothelial growth
factor stimulus" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0044344 "cellular response to
fibroblast growth factor stimulus" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0071310
"cellular response to organic substance" evidence=ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003071 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01285 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:620029
GO:GO:0005634 GO:GO:0043154 GO:GO:0006917 GO:GO:0044344
GO:GO:0046872 GO:GO:0001938 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0005667 GO:GO:0001077 GO:GO:0030522
GO:GO:0002042 GO:GO:0035924 GO:GO:0035767 eggNOG:NOG245120
GeneTree:ENSGT00640000091364 CTD:3164 HOGENOM:HOG000230925
HOVERGEN:HBG052663 KO:K04465 OMA:KWAEKIP OrthoDB:EOG4VMFF7
EMBL:U17254 EMBL:BC097313 IPI:IPI00211154 PIR:JQ0623
RefSeq:NP_077364.2 UniGene:Rn.10000 PDB:1CIT PDB:1YJE PDBsum:1CIT
PDBsum:1YJE ProteinModelPortal:P22829 SMR:P22829 STRING:P22829
PhosphoSite:P22829 PRIDE:P22829 Ensembl:ENSRNOT00000010171
GeneID:79240 KEGG:rno:79240 InParanoid:P22829
EvolutionaryTrace:P22829 NextBio:614676 Genevestigator:P22829
GermOnline:ENSRNOG00000007607 Uniprot:P22829
Length = 597
Score = 419 (152.6 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 96/181 (53%), Positives = 111/181 (61%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
CAVCGD A+CQHYGVRTCEGCKGFFKRTVQK +KY+CLA+K CPVD
Sbjct: 266 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKSAKYICLANKDCPVDKRRRNRCQFCRFQK 325
Query: 103 CLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXX-XXXXXXLITA-LYREPNPLE----- 155
CL VGMVKEVVRTDSLKGRRGRL LI A L PN +
Sbjct: 326 CLAVGMVKEVVRTDSLKGRRGRLPSKPKQPPDASPTNLLTSLIRAHLDSGPNTAKLDYSK 385
Query: 156 ------PPIAEPEK--IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
P + + +QQFY LL+ S+DVIR +A+KIPGF +L DQ+LL +SA LEL
Sbjct: 386 FQELVLPRFGKEDAGDVQQFYDLLSGSLDVIRKWAEKIPGFIELSPGDQDLLLESAFLEL 445
Query: 208 F 208
F
Sbjct: 446 F 446
Score = 334 (122.6 bits), Expect = 2.9e-31, Sum P(2) = 2.9e-31
Identities = 65/111 (58%), Positives = 86/111 (77%)
Query: 225 IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKL 284
+QQFY LL+ S+DVIR +A+KIPGF +L DQ+LL +SA LELF+LRLAYR++ + KL
Sbjct: 402 VQQFYDLLSGSLDVIRKWAEKIPGFIELSPGDQDLLLESAFLELFILRLAYRSKPGEGKL 461
Query: 285 IFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
IFC+G+VL + QC R FGD W++ IL F +SLH + +D+ AFACL AL LI
Sbjct: 462 IFCSGLVLHRLQCARGFGD-WIDNILAFSRSLHSLGVDVPAFACLSALVLI 511
Score = 37 (18.1 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 28 GCDTSRPTPPSPS 40
G S P+PP+P+
Sbjct: 132 GSPCSAPSPPTPN 144
>MGI|MGI:1352454 [details] [associations]
symbol:Nr4a1 "nuclear receptor subfamily 4, group A, member
1" species:10090 "Mus musculus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0001938 "positive regulation of
endothelial cell proliferation" evidence=ISO] [GO:0002042 "cell
migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IMP] [GO:0006917 "induction of apoptosis"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010035 "response to inorganic substance" evidence=ISA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=IEA] [GO:0035767 "endothelial cell chemotaxis"
evidence=ISO] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IMP] [GO:0035924 "cellular response to vascular
endothelial growth factor stimulus" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=IDA] [GO:0043154
"negative regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IDA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0044344 "cellular
response to fibroblast growth factor stimulus" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0071310 "cellular
response to organic substance" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003071 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01285 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1352454 GO:GO:0043154
GO:GO:0042803 GO:GO:0006917 GO:GO:0044344 GO:GO:0046872
GO:GO:0001938 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0005667 GO:GO:0001077 GO:GO:0010035 GO:GO:0030522
GO:GO:0035914 GO:GO:0071310 GO:GO:0002042 GO:GO:0035924
GO:GO:0035767 eggNOG:NOG245120 CTD:3164 HOGENOM:HOG000230925
HOVERGEN:HBG052663 KO:K04465 OMA:KWAEKIP OrthoDB:EOG4VMFF7
EMBL:J04113 EMBL:X16995 EMBL:X60132 EMBL:BC004770 IPI:IPI00121733
PIR:S06953 RefSeq:NP_034574.1 UniGene:Mm.119
ProteinModelPortal:P12813 SMR:P12813 STRING:P12813
PhosphoSite:P12813 PRIDE:P12813 Ensembl:ENSMUST00000023779
GeneID:15370 KEGG:mmu:15370 InParanoid:P12813 NextBio:288006
Bgee:P12813 CleanEx:MM_NR4A1 Genevestigator:P12813
GermOnline:ENSMUSG00000023034 Uniprot:P12813
Length = 601
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 93/181 (51%), Positives = 111/181 (61%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
CAVCGD A+CQHYGVRTCEGCKGFFKRTVQK +KY+CLA+K CPVD
Sbjct: 270 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKSAKYICLANKDCPVDKRRRNRCQFCRFQK 329
Query: 103 CLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYREPNP----LE--- 155
CL VGMVKEVVRTDSLKGRRGRL + + + P L+
Sbjct: 330 CLAVGMVKEVVRTDSLKGRRGRLPSKPKQPPDASPTNLLTSLIRAHLDSGPSTAKLDYSK 389
Query: 156 ------PPIAEPEK--IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
P + + +QQFY LL+ S+DVIR +A+KIPGF +LC DQ+LL +SA LEL
Sbjct: 390 FQELVLPRFGKEDAGDVQQFYDLLSGSLDVIRKWAEKIPGFIELCPGDQDLLLESAFLEL 449
Query: 208 F 208
F
Sbjct: 450 F 450
Score = 343 (125.8 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 66/111 (59%), Positives = 87/111 (78%)
Query: 225 IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKL 284
+QQFY LL+ S+DVIR +A+KIPGF +LC DQ+LL +SA LELF+LRLAYR++ + KL
Sbjct: 406 VQQFYDLLSGSLDVIRKWAEKIPGFIELCPGDQDLLLESAFLELFILRLAYRSKPGEGKL 465
Query: 285 IFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
IFC+G+VL + QC R FGD W++ IL F +SLH + +D+ AFACL AL LI
Sbjct: 466 IFCSGLVLHQLQCARGFGD-WIDNILAFSRSLHSLGVDVPAFACLSALVLI 515
>UNIPROTKB|K9J6P0 [details] [associations]
symbol:K9J6P0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003071 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01285 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GeneTree:ENSGT00640000091364 EMBL:AAEX03015017
Ensembl:ENSCAFT00000011743 Uniprot:K9J6P0
Length = 562
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 95/193 (49%), Positives = 117/193 (60%)
Query: 32 SRPTPPSPSQ-LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
+R PS S+ CAVCGD A+CQHYGVRTCEGCKGFFKRTVQK +KY+CLA+K CPVD
Sbjct: 219 ARSGAPSGSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKR 278
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYRE 150
CL VGMVKEVVRTDSLKGRRGRL + + +
Sbjct: 279 RRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKQPPDASPANLLTSLVRAHLD 338
Query: 151 PNP----LE---------PPIAEPEK--IQQFYSLLTTSVDVIRHFADKIPGFSDLCKED 195
P L+ P + + +QQFY LL+ S++VIR +A+KIPGF++L D
Sbjct: 339 SGPSTAKLDYSKFQELVLPHFGKEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPGD 398
Query: 196 QELLFQSASLELF 208
Q+LL +SA LELF
Sbjct: 399 QDLLLESAFLELF 411
Score = 335 (123.0 bits), Expect = 7.5e-30, P = 7.5e-30
Identities = 64/111 (57%), Positives = 88/111 (79%)
Query: 225 IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKL 284
+QQFY LL+ S++VIR +A+KIPGF++L DQ+LL +SA LELF+LRLAYR++ + KL
Sbjct: 367 VQQFYDLLSGSLEVIRKWAEKIPGFAELSPGDQDLLLESAFLELFILRLAYRSKPAEGKL 426
Query: 285 IFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
IFC+G+VL + QC R FGD W+++IL F +SLH + +D+ AFACL AL LI
Sbjct: 427 IFCSGLVLHRLQCARGFGD-WIDSILAFSRSLHGLVVDVPAFACLSALVLI 476
>UNIPROTKB|P51666 [details] [associations]
symbol:NR4A1 "Nuclear receptor subfamily 4 group A member
1" species:9615 "Canis lupus familiaris" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0044344 "cellular
response to fibroblast growth factor stimulus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043154 "negative regulation of cysteine-type endopeptidase
activity involved in apoptotic process" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0035924
"cellular response to vascular endothelial growth factor stimulus"
evidence=IEA] [GO:0035767 "endothelial cell chemotaxis"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001938 "positive regulation of endothelial cell
proliferation" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003071
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01285
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0043154 GO:GO:0006917 GO:GO:0044344 GO:GO:0046872
GO:GO:0001938 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0005667 GO:GO:0001077 GO:GO:0030522 GO:GO:0002042
GO:GO:0035924 GO:GO:0035767 eggNOG:NOG245120 CTD:3164
HOGENOM:HOG000230925 HOVERGEN:HBG052663 KO:K04465 OrthoDB:EOG4VMFF7
EMBL:X97226 RefSeq:NP_001003227.1 UniGene:Cfa.1213
ProteinModelPortal:P51666 SMR:P51666 STRING:P51666 GeneID:403897
KEGG:cfa:403897 InParanoid:P51666 NextBio:20817389 Uniprot:P51666
Length = 598
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 95/193 (49%), Positives = 117/193 (60%)
Query: 32 SRPTPPSPSQ-LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
+R PS S+ CAVCGD A+CQHYGVRTCEGCKGFFKRTVQK +KY+CLA+K CPVD
Sbjct: 255 ARSGAPSGSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKR 314
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYRE 150
CL VGMVKEVVRTDSLKGRRGRL + + +
Sbjct: 315 RRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKQPPDASPANLLTSLVRAHLD 374
Query: 151 PNP----LE---------PPIAEPEK--IQQFYSLLTTSVDVIRHFADKIPGFSDLCKED 195
P L+ P + + +QQFY LL+ S++VIR +A+KIPGF++L D
Sbjct: 375 SGPSTAKLDYSKFQELVLPHFGKEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPGD 434
Query: 196 QELLFQSASLELF 208
Q+LL +SA LELF
Sbjct: 435 QDLLLESAFLELF 447
Score = 335 (123.0 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 64/111 (57%), Positives = 88/111 (79%)
Query: 225 IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKL 284
+QQFY LL+ S++VIR +A+KIPGF++L DQ+LL +SA LELF+LRLAYR++ + KL
Sbjct: 403 VQQFYDLLSGSLEVIRKWAEKIPGFAELSPGDQDLLLESAFLELFILRLAYRSKPAEGKL 462
Query: 285 IFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
IFC+G+VL + QC R FGD W+++IL F +SLH + +D+ AFACL AL LI
Sbjct: 463 IFCSGLVLHRLQCARGFGD-WIDSILAFSRSLHGLVVDVPAFACLSALVLI 512
>UNIPROTKB|Q0V8F0 [details] [associations]
symbol:NR4A1 "Nuclear receptor subfamily 4 group A member
1" species:9913 "Bos taurus" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0044344 "cellular
response to fibroblast growth factor stimulus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043154 "negative regulation of cysteine-type endopeptidase
activity involved in apoptotic process" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0035924
"cellular response to vascular endothelial growth factor stimulus"
evidence=IEA] [GO:0035767 "endothelial cell chemotaxis"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001938 "positive regulation of endothelial cell
proliferation" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003071
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01285
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0043154 GO:GO:0006917 GO:GO:0044344 GO:GO:0046872
GO:GO:0001938 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0005667 GO:GO:0001077 GO:GO:0030522 GO:GO:0002042
GO:GO:0035924 GO:GO:0035767 eggNOG:NOG245120
GeneTree:ENSGT00640000091364 EMBL:BT026269 IPI:IPI00686023
RefSeq:NP_001069379.1 UniGene:Bt.23373 ProteinModelPortal:Q0V8F0
SMR:Q0V8F0 STRING:Q0V8F0 PRIDE:Q0V8F0 Ensembl:ENSBTAT00000000648
GeneID:528390 KEGG:bta:528390 CTD:3164 HOGENOM:HOG000230925
HOVERGEN:HBG052663 InParanoid:Q0V8F0 KO:K04465 OMA:KWAEKIP
OrthoDB:EOG4VMFF7 NextBio:20874811 ArrayExpress:Q0V8F0
Uniprot:Q0V8F0
Length = 598
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 95/193 (49%), Positives = 116/193 (60%)
Query: 32 SRPTPPSPSQ-LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
+R P S+ CAVCGD A+CQHYGVRTCEGCKGFFKRTVQK +KY+CLA+K CPVD
Sbjct: 255 ARSGAPGGSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKR 314
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYRE 150
CL VGMVKEVVRTDSLKGRRGRL + + +
Sbjct: 315 RRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKQPPETSPAHLLTSLVRAHLD 374
Query: 151 PNP----LE----PPIAEPE-------KIQQFYSLLTTSVDVIRHFADKIPGFSDLCKED 195
P L+ +A P +QQFY LL+ S++VIR +A+KIPGF++L D
Sbjct: 375 SGPSTSKLDYSKFQELALPHFGKEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPGD 434
Query: 196 QELLFQSASLELF 208
Q+LL +SA LELF
Sbjct: 435 QDLLLESAFLELF 447
Score = 338 (124.0 bits), Expect = 4.7e-30, P = 4.7e-30
Identities = 65/111 (58%), Positives = 88/111 (79%)
Query: 225 IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKL 284
+QQFY LL+ S++VIR +A+KIPGF++L DQ+LL +SA LELF+LRLAYR++ + KL
Sbjct: 403 VQQFYDLLSGSLEVIRKWAEKIPGFAELSPGDQDLLLESAFLELFILRLAYRSKPAEGKL 462
Query: 285 IFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
IFC+G+VL + QC R FGD W+++IL F +SLH + +DI AFACL AL LI
Sbjct: 463 IFCSGLVLHRLQCARGFGD-WIDSILAFSRSLHSLVVDIPAFACLSALVLI 512
>UNIPROTKB|P22736 [details] [associations]
symbol:NR4A1 "Nuclear receptor subfamily 4 group A member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0043154
"negative regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=TAS] [GO:0008543 "fibroblast
growth factor receptor signaling pathway" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0048011 "neurotrophin TRK
receptor signaling pathway" evidence=TAS] [GO:0048015
"phosphatidylinositol-mediated signaling" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0035924 "cellular response to
vascular endothelial growth factor stimulus" evidence=IMP]
[GO:0001938 "positive regulation of endothelial cell proliferation"
evidence=IMP] [GO:0044344 "cellular response to fibroblast growth
factor stimulus" evidence=IMP] [GO:0035767 "endothelial cell
chemotaxis" evidence=IMP] [GO:0002042 "cell migration involved in
sprouting angiogenesis" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003071
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01285
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:nfat_3pathway Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0007173
GO:GO:0008543 GO:GO:0048011 GO:GO:0043154 GO:GO:0005654
GO:GO:0006917 GO:GO:0046872 GO:GO:0003677 GO:GO:0001938
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
Pathway_Interaction_DB:rxr_vdr_pathway EMBL:CH471111 GO:GO:0005667
GO:GO:0001077 EMBL:AC025259 GO:GO:0048015 GO:GO:0006367
GO:GO:0002042 GO:GO:0035924 GO:GO:0035767 eggNOG:NOG245120 CTD:3164
HOGENOM:HOG000230925 HOVERGEN:HBG052663 KO:K04465 OrthoDB:EOG4VMFF7
EMBL:D49728 EMBL:L13740 EMBL:AK297526 EMBL:BC016147 IPI:IPI00743108
IPI:IPI01011914 PIR:A37251 RefSeq:NP_001189162.1 RefSeq:NP_002126.2
RefSeq:NP_775180.1 UniGene:Hs.524430 UniGene:Hs.670088 PDB:2QW4
PDB:3V3E PDB:3V3Q PDBsum:2QW4 PDBsum:3V3E PDBsum:3V3Q
ProteinModelPortal:P22736 SMR:P22736 IntAct:P22736
MINT:MINT-2859679 STRING:P22736 PhosphoSite:P22736 DMDM:127819
PRIDE:P22736 DNASU:3164 Ensembl:ENST00000243050
Ensembl:ENST00000360284 Ensembl:ENST00000394824
Ensembl:ENST00000394825 Ensembl:ENST00000550082 GeneID:3164
KEGG:hsa:3164 UCSC:uc001rzs.3 GeneCards:GC12P052416
H-InvDB:HIX0171621 HGNC:HGNC:7980 MIM:139139 neXtProt:NX_P22736
PharmGKB:PA31761 InParanoid:P22736 PhylomeDB:P22736
BindingDB:P22736 ChEMBL:CHEMBL1293229 ChiTaRS:NR4A1
EvolutionaryTrace:P22736 GenomeRNAi:3164 NextBio:12546
ArrayExpress:P22736 Bgee:P22736 CleanEx:HS_NR4A1
Genevestigator:P22736 GermOnline:ENSG00000123358 Uniprot:P22736
Length = 598
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 94/193 (48%), Positives = 116/193 (60%)
Query: 32 SRPTPPSPSQ-LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
+R P S+ CAVCGD A+CQHYGVRTCEGCKGFFKRTVQK +KY+CLA+K CPVD
Sbjct: 255 ARSGAPGGSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKR 314
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYRE 150
CL VGMVKEVVRTDSLKGRRGRL + + +
Sbjct: 315 RRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKQPPDASPANLLTSLVRAHLD 374
Query: 151 PNP----LE---------PPIAEPEK--IQQFYSLLTTSVDVIRHFADKIPGFSDLCKED 195
P L+ P + + +QQFY LL+ S++VIR +A+KIPGF++L D
Sbjct: 375 SGPSTAKLDYSKFQELVLPHFGKEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPAD 434
Query: 196 QELLFQSASLELF 208
Q+LL +SA LELF
Sbjct: 435 QDLLLESAFLELF 447
Score = 336 (123.3 bits), Expect = 7.8e-30, P = 7.8e-30
Identities = 64/111 (57%), Positives = 88/111 (79%)
Query: 225 IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKL 284
+QQFY LL+ S++VIR +A+KIPGF++L DQ+LL +SA LELF+LRLAYR++ + KL
Sbjct: 403 VQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKL 462
Query: 285 IFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
IFC+G+VL + QC R FGD W+++IL F +SLH + +D+ AFACL AL LI
Sbjct: 463 IFCSGLVLHRLQCARGFGD-WIDSILAFSRSLHSLLVDVPAFACLSALVLI 512
>UNIPROTKB|F5GXF0 [details] [associations]
symbol:NR4A1 "Nuclear receptor subfamily 4 group A member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003071 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01285 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:AC025259 GO:GO:0030522 OMA:KWAEKIP HGNC:HGNC:7980
ChiTaRS:NR4A1 IPI:IPI00027454 ProteinModelPortal:F5GXF0 SMR:F5GXF0
PRIDE:F5GXF0 Ensembl:ENST00000545748 ArrayExpress:F5GXF0
Bgee:F5GXF0 Uniprot:F5GXF0
Length = 652
Score = 417 (151.9 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 94/193 (48%), Positives = 116/193 (60%)
Query: 32 SRPTPPSPSQ-LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
+R P S+ CAVCGD A+CQHYGVRTCEGCKGFFKRTVQK +KY+CLA+K CPVD
Sbjct: 309 ARSGAPGGSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKR 368
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYRE 150
CL VGMVKEVVRTDSLKGRRGRL + + +
Sbjct: 369 RRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKQPPDASPANLLTSLVRAHLD 428
Query: 151 PNP----LE---------PPIAEPEK--IQQFYSLLTTSVDVIRHFADKIPGFSDLCKED 195
P L+ P + + +QQFY LL+ S++VIR +A+KIPGF++L D
Sbjct: 429 SGPSTAKLDYSKFQELVLPHFGKEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPAD 488
Query: 196 QELLFQSASLELF 208
Q+LL +SA LELF
Sbjct: 489 QDLLLESAFLELF 501
Score = 336 (123.3 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 64/111 (57%), Positives = 88/111 (79%)
Query: 225 IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKL 284
+QQFY LL+ S++VIR +A+KIPGF++L DQ+LL +SA LELF+LRLAYR++ + KL
Sbjct: 457 VQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKL 516
Query: 285 IFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
IFC+G+VL + QC R FGD W+++IL F +SLH + +D+ AFACL AL LI
Sbjct: 517 IFCSGLVLHRLQCARGFGD-WIDSILAFSRSLHSLLVDVPAFACLSALVLI 566
>ZFIN|ZDB-GENE-040704-11 [details] [associations]
symbol:nr4a1 "nuclear receptor subfamily 4, group A,
member 1" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040704-11
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 EMBL:AY542372 UniGene:Dr.9243
ProteinModelPortal:I6LBI5 Uniprot:I6LBI5
Length = 580
Score = 367 (134.2 bits), Expect = 2.3e-33, P = 2.3e-33
Identities = 79/141 (56%), Positives = 98/141 (69%)
Query: 202 SASLELF-YREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELL 260
SA+L+ Y+E P + IQQFY LLT S+DVIR +A IPGFS CKEDQELL
Sbjct: 355 SANLDYSKYQESTSGLPEKEDANDIQQFYDLLTGSMDVIRKWAGSIPGFSAFCKEDQELL 414
Query: 261 FQSASLELFVLRLAYR------TRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQ 314
+SA +ELF+LRLAYR + E KLIFCNGVVL + QC RSFGD W+++I+EF Q
Sbjct: 415 LESAFVELFILRLAYRFIYAFMSNPETDKLIFCNGVVLHRTQCVRSFGD-WIDSIMEFSQ 473
Query: 315 SLHLMEIDISAFACLCALTLI 335
SLH + +DISAF+CL L +I
Sbjct: 474 SLHRLNLDISAFSCLATLVII 494
Score = 336 (123.3 bits), Expect = 6.8e-30, P = 6.8e-30
Identities = 78/167 (46%), Positives = 93/167 (55%)
Query: 35 TPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXX 94
+P CAVCGD A+CQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K CPVD
Sbjct: 231 SPTGNEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRRRNR 290
Query: 95 XXXXXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXX-----XXLITALYR 149
CL VGMVKEVVRTDSLKGRRGRL L+TA +
Sbjct: 291 CQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKAVQDSVSVSSPVNIIASLVTA-HI 349
Query: 150 EPNPLEPPIAEPEKIQQFYSLLTTSVDV--IRHFADKIPGFSDLCKE 194
+ NP + + K Q+ S L D I+ F D + G D+ ++
Sbjct: 350 DSNPASANL-DYSKYQESTSGLPEKEDANDIQQFYDLLTGSMDVIRK 395
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 35/61 (57%), Positives = 41/61 (67%)
Query: 148 YREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
Y+E P + IQQFY LLT S+DVIR +A IPGFS CKEDQELL +SA +EL
Sbjct: 363 YQESTSGLPEKEDANDIQQFYDLLTGSMDVIRKWAGSIPGFSAFCKEDQELLLESAFVEL 422
Query: 208 F 208
F
Sbjct: 423 F 423
>UNIPROTKB|O97727 [details] [associations]
symbol:NOR-1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR001628
InterPro:IPR003070 InterPro:IPR003072 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR01284
PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
GO:GO:0030522 GeneTree:ENSGT00640000091364 HOGENOM:HOG000230925
HOVERGEN:HBG052663 HSSP:P43354 EMBL:CU302447 EMBL:CU210903
UniGene:Ssc.761 EMBL:AJ011768 SMR:O97727 STRING:O97727
Ensembl:ENSSSCT00000005926 Uniprot:O97727
Length = 446
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 69/103 (66%), Positives = 73/103 (70%)
Query: 28 GCDTSRPTPPSPSQL-----CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAD 82
G S P+PP+ S CAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+
Sbjct: 289 GESPSLPSPPNRSTASGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLAN 348
Query: 83 KACPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
K CPVD CL VGMVKEVVRTDSLKGRRGRL
Sbjct: 349 KNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRL 391
>UNIPROTKB|I3LM58 [details] [associations]
symbol:NR4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0044344 "cellular response to fibroblast growth
factor stimulus" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0035924 "cellular response to vascular
endothelial growth factor stimulus" evidence=IEA] [GO:0035767
"endothelial cell chemotaxis" evidence=IEA] [GO:0006917 "induction
of apoptosis" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0002042 "cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0001938 "positive
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 PRINTS:PR01284
SMART:SM00430 GO:GO:0043154 GO:GO:0006917 GO:GO:0044344
GO:GO:0001938 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0005667 GO:GO:0001077
GO:GO:0030522 GO:GO:0002042 GO:GO:0035924 GO:GO:0035767
GeneTree:ENSGT00640000091364 Ensembl:ENSSSCT00000029565 OMA:ESHTAFR
Uniprot:I3LM58
Length = 202
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 63/111 (56%), Positives = 88/111 (79%)
Query: 225 IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKL 284
+QQFY LL+ S++VIR +A+K+PGF++L DQ+LL +SA LELF+LRLAYR++ + KL
Sbjct: 72 VQQFYDLLSGSLEVIRKWAEKVPGFAELSPSDQDLLLESAFLELFILRLAYRSKPAEGKL 131
Query: 285 IFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
IFC+G+VL + QC R FGD W+++IL F +SLH + +D+ AFACL AL LI
Sbjct: 132 IFCSGLVLHRLQCARGFGD-WIDSILAFSRSLHSLVVDVPAFACLSALVLI 181
Score = 178 (67.7 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 47/116 (40%), Positives = 64/116 (55%)
Query: 108 MVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYREPNP----LE-------- 155
MVKEVVRTDSLKGRRGRL + + + P L+
Sbjct: 1 MVKEVVRTDSLKGRRGRLPSKPKQSPDASPANLLTSLVRAHLDSGPSTSKLDYSQFQELV 60
Query: 156 -PPIAEPEK--IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF 208
P + + +QQFY LL+ S++VIR +A+K+PGF++L DQ+LL +SA LELF
Sbjct: 61 LPHFGKEDAGDVQQFYDLLSGSLEVIRKWAEKVPGFAELSPSDQDLLLESAFLELF 116
>ZFIN|ZDB-GENE-990415-68 [details] [associations]
symbol:esrra "estrogen-related receptor alpha"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0042074 "cell
migration involved in gastrulation" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-68
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0042074 CTD:2101
eggNOG:NOG282629 HOGENOM:HOG000233467 HOVERGEN:HBG108344 KO:K08552
OMA:PLPFPGS GeneTree:ENSGT00700000104391 HSSP:P20393 EMBL:BX465841
EMBL:AY556395 IPI:IPI00482428 RefSeq:NP_998120.1 UniGene:Dr.30382
SMR:Q6Q6F6 Ensembl:ENSDART00000100658 GeneID:405891 KEGG:dre:405891
InParanoid:Q6Q6F6 NextBio:20817852 Uniprot:Q6Q6F6
Length = 436
Score = 207 (77.9 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 38/84 (45%), Positives = 49/84 (58%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGD+A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 96 PKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGNIEYSCPASNECEITKRRRKACQAC 155
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRR 122
CL+VGM+KE VR D ++G R
Sbjct: 156 RFTKCLKVGMLKEGVRLDRVRGGR 179
Score = 137 (53.3 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 41/133 (30%), Positives = 65/133 (48%)
Query: 203 ASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQ 262
A E + P+PL+P A+ + L + VI +A IPGF L DQ + Q
Sbjct: 219 AEPEKLFAMPDPLQPDTAQ-RTLTTLCDLADRELVVIIGWAKHIPGFLSLSLADQMSVLQ 277
Query: 263 SASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNA-ILEFCQSLHLMEI 321
S LE+ VL +AYR+ + +++F VL+++ R G LNA I + + +++
Sbjct: 278 SVWLEVLVLGVAYRSLGCEDEVVFAEDFVLDEEM-SRVAGLTELNAAISQLARRFRALQL 336
Query: 322 DISAFACLCALTL 334
D F L A+ L
Sbjct: 337 DREEFVMLKAIAL 349
Score = 74 (31.1 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
L+ P+PL+P A+ + L + VI +A IPGF L DQ + QS LE
Sbjct: 224 LFAMPDPLQPDTAQ-RTLTTLCDLADRELVVIIGWAKHIPGFLSLSLADQMSVLQSVWLE 282
Query: 207 L 207
+
Sbjct: 283 V 283
>ZFIN|ZDB-GENE-030821-2 [details] [associations]
symbol:esrrga "estrogen-related receptor gamma a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-030821-2 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 EMBL:CT027582 IPI:IPI00489991
ProteinModelPortal:F1QH45 Ensembl:ENSDART00000126966
ArrayExpress:F1QH45 Bgee:F1QH45 Uniprot:F1QH45
Length = 508
Score = 201 (75.8 bits), Expect = 9.4e-26, Sum P(2) = 9.4e-26
Identities = 38/84 (45%), Positives = 48/84 (57%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 167 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 226
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRR 122
CL VGM++E VR D ++G R
Sbjct: 227 RFMKCLTVGMMREGVRLDRVRGGR 250
Score = 146 (56.5 bits), Expect = 9.4e-26, Sum P(2) = 9.4e-26
Identities = 41/145 (28%), Positives = 72/145 (49%)
Query: 192 CKEDQELLFQS--ASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGF 249
C D +++ A E Y P+P P ++ + + L + V +A IPGF
Sbjct: 281 CLADNKIVSHLLVAEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVNIGWAKHIPGF 339
Query: 250 SDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAI 309
S L DQ L QSA +E+ +LR+ YR+ + + KL++ ++++ Q + + D NAI
Sbjct: 340 STLSLADQMSLLQSAWMEILILRVVYRSLSFEDKLVYAEDYIMDEDQSKLAGLLDLNNAI 399
Query: 310 LEFCQSLHLMEIDISAFACLCALTL 334
L+ + M+++ F L A+ L
Sbjct: 400 LQLVKKYKSMKLEKEEFVTLKAIAL 424
Score = 67 (28.6 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
+Y P+P P ++ + + L + V +A IPGFS L DQ L QSA +E
Sbjct: 299 IYAMPDPTVPD-SDIKALTTLCDLADRELVVNIGWAKHIPGFSTLSLADQMSLLQSAWME 357
Query: 207 L 207
+
Sbjct: 358 I 358
>MGI|MGI:1346831 [details] [associations]
symbol:Esrra "estrogen related receptor, alpha"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0030278 "regulation of ossification" evidence=ISO] [GO:0042127
"regulation of cell proliferation" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISO] [GO:0045670 "regulation of osteoclast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051216 "cartilage development" evidence=ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1346831
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0042127 GO:GO:0051216 GO:GO:0045670
GO:GO:0045667 CTD:2101 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 KO:K08552 OrthoDB:EOG48KRBN OMA:PLPFPGS
EMBL:U85259 EMBL:AK156371 EMBL:BC138586 EMBL:BC171958
IPI:IPI00762735 RefSeq:NP_031979.2 UniGene:Mm.386776
ProteinModelPortal:O08580 SMR:O08580 IntAct:O08580 STRING:O08580
PhosphoSite:O08580 PRIDE:O08580 Ensembl:ENSMUST00000025906
GeneID:26379 KEGG:mmu:26379 GeneTree:ENSGT00700000104391
InParanoid:B2RRU9 ChEMBL:CHEMBL1914280 NextBio:304289 Bgee:O08580
CleanEx:MM_ESRRA Genevestigator:O08580
GermOnline:ENSMUSG00000024955 Uniprot:O08580
Length = 422
Score = 207 (77.9 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 38/84 (45%), Positives = 49/84 (58%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGD+A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 75 PKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQAC 134
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRR 122
CL+VGM+KE VR D ++G R
Sbjct: 135 RFTKCLRVGMLKEGVRLDRVRGGR 158
Score = 121 (47.7 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 36/129 (27%), Positives = 59/129 (45%)
Query: 206 ELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSAS 265
E Y P+P P P + L + V +A IPGFS L DQ + QS
Sbjct: 206 EKLYAMPDPASPDGHLPA-VATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVW 264
Query: 266 LELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISA 325
+E+ VL +A R+ +L F +VL+++ + + D A+L+ + L + ++
Sbjct: 265 MEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGDLGAALLQLVRRLQALRLEREE 324
Query: 326 FACLCALTL 334
+ L AL L
Sbjct: 325 YVLLKALAL 333
Score = 70 (29.7 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
LY P+P P P + L + V +A IPGFS L DQ + QS +E
Sbjct: 208 LYAMPDPASPDGHLPA-VATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWME 266
Query: 207 L 207
+
Sbjct: 267 V 267
>RGD|1583866 [details] [associations]
symbol:Esrra "estrogen related receptor, alpha" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0030278 "regulation of ossification"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045670 "regulation of
osteoclast differentiation" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:1583866 GO:GO:0005634 GO:GO:0045893 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0042127 GO:GO:0051216 GO:GO:0045670
GO:GO:0045667 HSSP:P11474 CTD:2101 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344 KO:K08552 OrthoDB:EOG48KRBN
OMA:PLPFPGS GeneTree:ENSGT00700000104391 EMBL:AY280663
EMBL:BC104701 IPI:IPI00371457 RefSeq:NP_001008511.2
UniGene:Rn.130171 ProteinModelPortal:Q5QJV7 SMR:Q5QJV7
STRING:Q5QJV7 PhosphoSite:Q5QJV7 PRIDE:Q5QJV7
Ensembl:ENSRNOT00000028697 GeneID:293701 KEGG:rno:293701
UCSC:RGD:1583866 InParanoid:Q5QJV7 NextBio:636801
Genevestigator:Q5QJV7 Uniprot:Q5QJV7
Length = 422
Score = 207 (77.9 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 38/84 (45%), Positives = 49/84 (58%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGD+A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 75 PKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQAC 134
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRR 122
CL+VGM+KE VR D ++G R
Sbjct: 135 RFTKCLRVGMLKEGVRLDRVRGGR 158
Score = 121 (47.7 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 36/129 (27%), Positives = 59/129 (45%)
Query: 206 ELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSAS 265
E Y P+P P P + L + V +A IPGFS L DQ + QS
Sbjct: 206 EKLYAMPDPASPDGHLPA-VATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVW 264
Query: 266 LELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISA 325
+E+ VL +A R+ +L F +VL+++ + + D A+L+ + L + ++
Sbjct: 265 MEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGDLGAALLQLVRRLQALRLEREE 324
Query: 326 FACLCALTL 334
+ L AL L
Sbjct: 325 YVLLKALAL 333
Score = 70 (29.7 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
LY P+P P P + L + V +A IPGFS L DQ + QS +E
Sbjct: 208 LYAMPDPASPDGHLPA-VATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWME 266
Query: 207 L 207
+
Sbjct: 267 V 267
>WB|WBGene00003605 [details] [associations]
symbol:nhr-6 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030728 "ovulation" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0060278 "regulation of ovulation"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0035211
"spermathecum morphogenesis" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0009792 GO:GO:0002119 GO:GO:0030728 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0035211 eggNOG:NOG245120 KO:K08558
GO:GO:0060278 EMBL:AF083224 EMBL:AF273770 EMBL:AY204167 EMBL:Z36237
EMBL:U13076 PIR:G88408 PIR:T43348 RefSeq:NP_497731.1
UniGene:Cel.19471 ProteinModelPortal:P41829 SMR:P41829
DIP:DIP-26405N IntAct:P41829 MINT:MINT-210819 STRING:P41829
EnsemblMetazoa:C48D5.1a GeneID:175462 KEGG:cel:CELE_C48D5.1
UCSC:C48D5.1 CTD:175462 WormBase:C48D5.1a
GeneTree:ENSGT00640000091364 HOGENOM:HOG000019029 InParanoid:P41829
OMA:GARTCEG NextBio:888258 ArrayExpress:P41829 Uniprot:P41829
Length = 619
Score = 287 (106.1 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 52/85 (61%), Positives = 58/85 (68%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
++CAVC D A C HYG RTCEGCKGFFKRTVQK SKY C +K CP+D
Sbjct: 266 KMCAVCNDRAVCLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKTCPIDKRYRSRCQYCRY 325
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGRL 125
CL+VGMVKE+VR SL GRRGRL
Sbjct: 326 QKCLEVGMVKEIVRHGSLSGRRGRL 350
>UNIPROTKB|Q6QMY5 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AY533243 RefSeq:NP_001002936.1 UniGene:Cfa.3916
HSSP:P11474 ProteinModelPortal:Q6QMY5 SMR:Q6QMY5 STRING:Q6QMY5
GeneID:403169 KEGG:cfa:403169 CTD:2101 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344 InParanoid:Q6QMY5 KO:K08552
OrthoDB:EOG48KRBN NextBio:20816913 Uniprot:Q6QMY5
Length = 422
Score = 207 (77.9 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 38/84 (45%), Positives = 49/84 (58%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGD+A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 75 PKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQAC 134
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRR 122
CL+VGM+KE VR D ++G R
Sbjct: 135 RFTKCLRVGMLKEGVRLDRVRGGR 158
Score = 117 (46.2 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 38/130 (29%), Positives = 60/130 (46%)
Query: 206 ELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSAS 265
E Y P+P P P + L + V +A IPGFS L DQ + QS
Sbjct: 206 EKLYAMPDPAGPDGHLPA-VATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVW 264
Query: 266 LELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAIL-EFCQSLHLMEIDIS 324
+E+ VL +A R+ +L F +VL+++ R+ G L A+L + + L + ++
Sbjct: 265 MEVLVLGVAQRSLPLQDELAFAEDLVLDEEGA-RAAGLGELGAVLLQLVRRLQALRLERE 323
Query: 325 AFACLCALTL 334
+ L AL L
Sbjct: 324 EYVLLKALAL 333
Score = 68 (29.0 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
LY P+P P P + L + V +A IPGFS L DQ + QS +E
Sbjct: 208 LYAMPDPAGPDGHLPA-VATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWME 266
Query: 207 L 207
+
Sbjct: 267 V 267
>UNIPROTKB|F1MBX3 [details] [associations]
symbol:ESRRA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 CTD:2101 KO:K08552 OMA:PLPFPGS
GeneTree:ENSGT00700000104391 EMBL:DAAA02063533 IPI:IPI00695134
RefSeq:NP_001178302.1 UniGene:Bt.15797 PRIDE:F1MBX3
Ensembl:ENSBTAT00000036417 GeneID:507834 KEGG:bta:507834
NextBio:20868240 Uniprot:F1MBX3
Length = 422
Score = 207 (77.9 bits), Expect = 4.0e-24, Sum P(2) = 4.0e-24
Identities = 38/84 (45%), Positives = 49/84 (58%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGD+A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 75 PKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQAC 134
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRR 122
CL+VGM+KE VR D ++G R
Sbjct: 135 RFTKCLRVGMLKEGVRLDRVRGGR 158
Score = 116 (45.9 bits), Expect = 4.0e-24, Sum P(2) = 4.0e-24
Identities = 38/130 (29%), Positives = 60/130 (46%)
Query: 206 ELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSAS 265
E Y P+P P P + L + V +A IPGFS L DQ + QS
Sbjct: 206 EKLYAMPDPAGPDGHLPA-VATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVW 264
Query: 266 LELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNA-ILEFCQSLHLMEIDIS 324
+E+ VL +A R+ +L F +VL+++ R+ G L A +L+ + L + ++
Sbjct: 265 MEVLVLGVAQRSLPLQDELAFAEDLVLDEEGA-RAAGLGELGAALLQLVRRLQALRLERE 323
Query: 325 AFACLCALTL 334
+ L AL L
Sbjct: 324 EYVLLKALAL 333
Score = 68 (29.0 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
LY P+P P P + L + V +A IPGFS L DQ + QS +E
Sbjct: 208 LYAMPDPAGPDGHLPA-VATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWME 266
Query: 207 L 207
+
Sbjct: 267 V 267
>UNIPROTKB|F1RQP2 [details] [associations]
symbol:ESRRA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 OMA:PLPFPGS
GeneTree:ENSGT00700000104391 EMBL:FP312658
Ensembl:ENSSSCT00000014241 Uniprot:F1RQP2
Length = 422
Score = 207 (77.9 bits), Expect = 4.0e-24, Sum P(2) = 4.0e-24
Identities = 38/84 (45%), Positives = 49/84 (58%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGD+A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 75 PKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQAC 134
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRR 122
CL+VGM+KE VR D ++G R
Sbjct: 135 RFTKCLRVGMLKEGVRLDRVRGGR 158
Score = 116 (45.9 bits), Expect = 4.0e-24, Sum P(2) = 4.0e-24
Identities = 38/130 (29%), Positives = 60/130 (46%)
Query: 206 ELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSAS 265
E Y P+P P P + L + V +A IPGFS L DQ + QS
Sbjct: 206 EKLYAMPDPAGPDGHLPA-VATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVW 264
Query: 266 LELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNA-ILEFCQSLHLMEIDIS 324
+E+ VL +A R+ +L F +VL+++ R+ G L A +L+ + L + ++
Sbjct: 265 MEVLVLGVAQRSLPLQDELAFAEDLVLDEEGA-RAAGLGELGAALLQLVRRLQALRLERE 323
Query: 325 AFACLCALTL 334
+ L AL L
Sbjct: 324 EYVLLKALAL 333
Score = 68 (29.0 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
LY P+P P P + L + V +A IPGFS L DQ + QS +E
Sbjct: 208 LYAMPDPAGPDGHLPA-VATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWME 266
Query: 207 L 207
+
Sbjct: 267 V 267
>UNIPROTKB|P11474 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0045667
"regulation of osteoblast differentiation" evidence=IEA]
[GO:0045670 "regulation of osteoclast differentiation"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0005496 GO:GO:0046872 GO:GO:0003677 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0042127
GO:GO:0051216 GO:GO:0045670 GO:GO:0006367 GO:GO:0045667 CTD:2101
eggNOG:NOG282629 HOGENOM:HOG000233467 HOVERGEN:HBG108344 KO:K08552
OrthoDB:EOG48KRBN EMBL:X51416 EMBL:L38487 EMBL:AP001453
IPI:IPI00005717 IPI:IPI00792208 PIR:A29345 RefSeq:NP_004442.3
UniGene:Hs.110849 PDB:1XB7 PDB:2PJL PDB:3D24 PDB:3K6P PDBsum:1XB7
PDBsum:2PJL PDBsum:3D24 PDBsum:3K6P ProteinModelPortal:P11474
SMR:P11474 DIP:DIP-35053N IntAct:P11474 MINT:MINT-215609
STRING:P11474 PhosphoSite:P11474 DMDM:215274146 PaxDb:P11474
PRIDE:P11474 DNASU:2101 Ensembl:ENST00000000442
Ensembl:ENST00000405666 Ensembl:ENST00000406310 GeneID:2101
KEGG:hsa:2101 UCSC:uc001nzq.1 UCSC:uc001nzr.1 GeneCards:GC11P064073
HGNC:HGNC:3471 MIM:601998 neXtProt:NX_P11474 PharmGKB:PA27887
OMA:PLPFPGS BindingDB:P11474 ChEMBL:CHEMBL3429
EvolutionaryTrace:P11474 GenomeRNAi:2101 NextBio:8503
ArrayExpress:P11474 Bgee:P11474 CleanEx:HS_ESRRA
Genevestigator:P11474 GermOnline:ENSG00000173153 Uniprot:P11474
Length = 423
Score = 207 (77.9 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 38/84 (45%), Positives = 49/84 (58%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGD+A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 75 PKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQAC 134
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRR 122
CL+VGM+KE VR D ++G R
Sbjct: 135 RFTKCLRVGMLKEGVRLDRVRGGR 158
Score = 116 (45.9 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 38/130 (29%), Positives = 60/130 (46%)
Query: 206 ELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSAS 265
E Y P+P P P + L + V +A IPGFS L DQ + QS
Sbjct: 207 EKLYAMPDPAGPDGHLPA-VATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVW 265
Query: 266 LELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNA-ILEFCQSLHLMEIDIS 324
+E+ VL +A R+ +L F +VL+++ R+ G L A +L+ + L + ++
Sbjct: 266 MEVLVLGVAQRSLPLQDELAFAEDLVLDEEGA-RAAGLGELGAALLQLVRRLQALRLERE 324
Query: 325 AFACLCALTL 334
+ L AL L
Sbjct: 325 EYVLLKALAL 334
Score = 68 (29.0 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
LY P+P P P + L + V +A IPGFS L DQ + QS +E
Sbjct: 209 LYAMPDPAGPDGHLPA-VATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWME 267
Query: 207 L 207
+
Sbjct: 268 V 268
>ZFIN|ZDB-GENE-040616-4 [details] [associations]
symbol:esrrgb "estrogen-related receptor gamma b"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040616-4 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104391
EMBL:BX004824 IPI:IPI00502886 Ensembl:ENSDART00000122258
ArrayExpress:F1QRG9 Bgee:F1QRG9 Uniprot:F1QRG9
Length = 444
Score = 199 (75.1 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 36/84 (42%), Positives = 48/84 (57%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGD+A+ HYGV +CE CK FFKRT+Q +Y C + C +
Sbjct: 105 PKRLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYSCSVSRDCEITKRRRKSCQAC 164
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRR 122
CL VGM++E VR D ++G R
Sbjct: 165 RFTKCLSVGMLREGVRLDRVRGGR 188
Score = 129 (50.5 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 31/93 (33%), Positives = 52/93 (55%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSF 301
+A IPGFS L DQ L QSA +E+ VLR+A+R+ D +L+F + +++ +Q + +
Sbjct: 268 WAKHIPGFSSLSLSDQMSLLQSAWMEILVLRVAFRSLPCDDRLLFADDYIMDAEQAKCAG 327
Query: 302 GDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
+ AIL+ + M ++ F L A+ L
Sbjct: 328 LLELHTAILQLVRRYRCMSLEREEFVTLKAIAL 360
Score = 61 (26.5 bits), Expect = 8.1e-17, Sum P(2) = 8.1e-17
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A IPGFS L DQ L QSA +E+
Sbjct: 268 WAKHIPGFSSLSLSDQMSLLQSAWMEI 294
>ZFIN|ZDB-GENE-070314-1 [details] [associations]
symbol:rargb "retinoic acid receptor, gamma b"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-070314-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448 OrthoDB:EOG4F7NK7
EMBL:EF028131 IPI:IPI00679293 RefSeq:NP_001076779.1
UniGene:Dr.135572 ProteinModelPortal:A2T928 SMR:A2T928
STRING:A2T928 GeneID:100034753 KEGG:dre:100034753 CTD:100034753
NextBio:20788475 Uniprot:A2T928
Length = 489
Score = 203 (76.5 bits), Expect = 6.9e-24, Sum P(2) = 6.9e-24
Identities = 39/94 (41%), Positives = 53/94 (56%)
Query: 32 SRPTPPSPSQL---CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVD 88
S P+PP P ++ C VC D ++ HYGV +CEGCKGFF+R++QK Y C DK C ++
Sbjct: 51 SSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQIN 110
Query: 89 XXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRR 122
C +VGM KE VR D K ++
Sbjct: 111 KVTRNRCQYCRLRKCFEVGMSKEAVRNDRNKKKK 144
Score = 124 (48.7 bits), Expect = 6.9e-24, Sum P(2) = 6.9e-24
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 227 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIF 286
+F L T + I FA ++PGF+ L DQ L +SA L++ +LR+ R E + F
Sbjct: 205 KFSELSTKCIIKIVEFAKRLPGFTSLTIADQITLLKSACLDILMLRICTRYTPEQDTMTF 264
Query: 287 CNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+G+ L + Q + FG + + F L +E+D + L A+ LI
Sbjct: 265 SDGLTLNRTQMHNAGFGP-LTDLVFAFAGQLLPLEMDDTETGLLSAICLI 313
Score = 68 (29.0 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 166 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
+F L T + I FA ++PGF+ L DQ L +SA L++
Sbjct: 205 KFSELSTKCIIKIVEFAKRLPGFTSLTIADQITLLKSACLDI 246
>ZFIN|ZDB-GENE-980526-531 [details] [associations]
symbol:rarga "retinoic acid receptor gamma a"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0060037 "pharyngeal system development"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-980526-531 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:BX465864 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:BX546466 IPI:IPI00817162
Ensembl:ENSDART00000103158 ArrayExpress:F1RAM8 Bgee:F1RAM8
Uniprot:F1RAM8
Length = 507
Score = 203 (76.5 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 39/94 (41%), Positives = 53/94 (56%)
Query: 32 SRPTPPSPSQL---CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVD 88
S P+PP P ++ C VC D ++ HYGV +CEGCKGFF+R++QK Y C DK C ++
Sbjct: 71 SSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQIN 130
Query: 89 XXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRR 122
C +VGM KE VR D K ++
Sbjct: 131 KVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKK 164
Score = 123 (48.4 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 227 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIF 286
+F L T + I FA ++PGF+ L DQ L +SA L++ +LR+ R E + F
Sbjct: 225 KFSELSTKCIIKIVEFAKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTF 284
Query: 287 CNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+G+ L + Q + FG + + F L +E+D + L A+ LI
Sbjct: 285 SDGLTLNRTQMHNAGFGP-LTDLVFAFAGQLLPLEMDDTETGLLSAICLI 333
Score = 67 (28.6 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 166 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
+F L T + I FA ++PGF+ L DQ L +SA L++
Sbjct: 225 KFSELSTKCIIKIVEFAKRLPGFTTLTIADQITLLKSACLDI 266
>UNIPROTKB|F1PFF7 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9615
"Canis lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 OMA:PLPFPGS
GeneTree:ENSGT00700000104391 EMBL:AAEX03011644
Ensembl:ENSCAFT00000022969 Uniprot:F1PFF7
Length = 613
Score = 207 (77.9 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 38/84 (45%), Positives = 49/84 (58%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGD+A+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 266 PKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQAC 325
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRR 122
CL+VGM+KE VR D ++G R
Sbjct: 326 RFTKCLRVGMLKEGVRLDRVRGGR 349
Score = 116 (45.9 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 38/130 (29%), Positives = 60/130 (46%)
Query: 206 ELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSAS 265
E Y P+P P P + L + V +A IPGFS L DQ + QS
Sbjct: 397 EKLYAMPDPAGPDGHLPA-VATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVW 455
Query: 266 LELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNA-ILEFCQSLHLMEIDIS 324
+E+ VL +A R+ +L F +VL+++ R+ G L A +L+ + L + ++
Sbjct: 456 MEVLVLGVAQRSLPLQDELAFAEDLVLDEEGA-RAAGLGELGAALLQLVRRLQALRLERE 514
Query: 325 AFACLCALTL 334
+ L AL L
Sbjct: 515 EYVLLKALAL 524
Score = 68 (29.0 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
LY P+P P P + L + V +A IPGFS L DQ + QS +E
Sbjct: 399 LYAMPDPAGPDGHLPA-VATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWME 457
Query: 207 L 207
+
Sbjct: 458 V 458
>UNIPROTKB|F1NQH5 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0003417 "growth plate cartilage
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0008285 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0043065 GO:GO:0032331 GO:GO:0003708 GO:GO:0061037
GeneTree:ENSGT00680000099662 EMBL:AADN02001127 EMBL:AADN02001120
EMBL:AADN02001121 EMBL:AADN02001122 EMBL:AADN02001123
EMBL:AADN02001124 EMBL:AADN02001125 EMBL:AADN02001126
IPI:IPI01017311 Ensembl:ENSGALT00000018429
Ensembl:ENSGALT00000037746 Uniprot:F1NQH5
Length = 359
Score = 190 (71.9 bits), Expect = 9.3e-23, Sum P(2) = 9.3e-23
Identities = 39/95 (41%), Positives = 51/95 (53%)
Query: 34 PTPPSPS------QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPV 87
P+PPSP + C VC D ++ HYGV CEGCKGFF+R++QK Y C DK C +
Sbjct: 13 PSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCVI 72
Query: 88 DXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRR 122
+ C +VGM KE VR D K ++
Sbjct: 73 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKK 107
Score = 126 (49.4 bits), Expect = 9.3e-23, Sum P(2) = 9.3e-23
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 227 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIF 286
+F L T + I FA ++PGF+ L DQ L ++A L++ +LR+ R E + F
Sbjct: 167 KFSELATKCIIKIVEFAKRLPGFTSLTIADQITLLKAACLDILILRICTRYTPEQDTMTF 226
Query: 287 CNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+G+ L + Q + FG + + F L +E+D + L A+ LI
Sbjct: 227 SDGLTLNRTQMHNAGFGP-LTDLVFTFANQLLPLEMDDTETGLLSAICLI 275
Score = 66 (28.3 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 166 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
+F L T + I FA ++PGF+ L DQ L ++A L++
Sbjct: 167 KFSELATKCIIKIVEFAKRLPGFTSLTIADQITLLKAACLDI 208
Score = 38 (18.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 202 SASLELFYREPNPLEPP 218
++S EL P+PL PP
Sbjct: 6 TSSEELVPSPPSPLPPP 22
>UNIPROTKB|F1N9Q8 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 OMA:QEVFVCI EMBL:AADN02001127
EMBL:AADN02001120 EMBL:AADN02001121 EMBL:AADN02001122
EMBL:AADN02001123 EMBL:AADN02001124 EMBL:AADN02001125
EMBL:AADN02001126 IPI:IPI00821263 ProteinModelPortal:F1N9Q8
Ensembl:ENSGALT00000029066 ArrayExpress:F1N9Q8 Uniprot:F1N9Q8
Length = 415
Score = 190 (71.9 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 39/95 (41%), Positives = 51/95 (53%)
Query: 34 PTPPSPS------QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPV 87
P+PPSP + C VC D ++ HYGV CEGCKGFF+R++QK Y C DK C +
Sbjct: 67 PSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCVI 126
Query: 88 DXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRR 122
+ C +VGM KE VR D K ++
Sbjct: 127 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKK 161
Score = 126 (49.4 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 227 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIF 286
+F L T + I FA ++PGF+ L DQ L ++A L++ +LR+ R E + F
Sbjct: 221 KFSELATKCIIKIVEFAKRLPGFTSLTIADQITLLKAACLDILILRICTRYTPEQDTMTF 280
Query: 287 CNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+G+ L + Q + FG + + F L +E+D + L A+ LI
Sbjct: 281 SDGLTLNRTQMHNAGFGP-LTDLVFTFANQLLPLEMDDTETGLLSAICLI 329
Score = 66 (28.3 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 166 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
+F L T + I FA ++PGF+ L DQ L ++A L++
Sbjct: 221 KFSELATKCIIKIVEFAKRLPGFTSLTIADQITLLKAACLDI 262
Score = 39 (18.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 186 PGFSDLCKEDQELLFQSASLELFYREPNPLEPP 218
P F ++ E ++S EL P+PL PP
Sbjct: 45 PPFKEVASLTVETQ-STSSEELVPSPPSPLPPP 76
>ZFIN|ZDB-GENE-980526-72 [details] [associations]
symbol:rarab "retinoic acid receptor, alpha b"
species:7955 "Danio rerio" [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0003708
"retinoic acid receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-72 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:BX537121 EMBL:CR392003
IPI:IPI00993231 Ensembl:ENSDART00000126022 Uniprot:E7EZ95
Length = 460
Score = 200 (75.5 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 39/94 (41%), Positives = 54/94 (57%)
Query: 32 SRPTPPSPSQL---CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVD 88
S P+PP P ++ C VC D ++ HYGV CEGCKGFF+R++QK Y C +K+C ++
Sbjct: 71 SPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHREKSCIIN 130
Query: 89 XXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRR 122
CL+VGM KE VR D K ++
Sbjct: 131 KVTRNRCQYCRLQKCLEVGMSKESVRNDRNKRKK 164
Score = 200 (75.5 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 58/193 (30%), Positives = 86/193 (44%)
Query: 32 SRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXX 91
S P PP + C VC D ++ HYGV CEGCKGFF+R++QK Y C +K+C ++
Sbjct: 74 SPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHREKSCIINKVT 133
Query: 92 XXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGR----------LXXXXXXXXXXXXXXXX 141
CL+VGM KE VR D K ++ L
Sbjct: 134 RNRCQYCRLQKCLEVGMSKESVRNDRNKRKKDDKKQECLENYVLSPDTEKMIEQVRKAHQ 193
Query: 142 XLITAL-----YREPNPLEPPIAEPEKIQQFYSLLTTSVDVIR--HFADKIPGFSDLCKE 194
+L Y N + +A + +S L+T +I+ FA ++PGF+ L
Sbjct: 194 ETFPSLCQLGKYTTNNSADHRVALDVDLWDKFSELSTKC-IIKTVEFAKQLPGFTTLTIA 252
Query: 195 DQELLFQSASLEL 207
DQ L ++A L++
Sbjct: 253 DQITLLKAACLDI 265
Score = 113 (44.8 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 30/110 (27%), Positives = 54/110 (49%)
Query: 227 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIF 286
+F L T + FA ++PGF+ L DQ L ++A L++ +LR+ R + + F
Sbjct: 224 KFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPDQDTMTF 283
Query: 287 CNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+G+ L + Q + FG + + F L +E+D + L A+ L+
Sbjct: 284 SDGLTLNRTQMHNAGFGP-LTDLVFAFANQLLPLEMDDAETGLLSAICLL 332
>UNIPROTKB|P22448 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001657 "ureteric bud development" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IDA] [GO:0071729 "beak
morphogenesis" evidence=IDA] [GO:0032526 "response to retinoic
acid" evidence=IDA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008285
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0000122 GO:GO:0043065 GO:GO:0032526 GO:GO:0035108
GO:GO:0032331 GO:GO:0071729 HOVERGEN:HBG005606 GO:GO:0003708
GO:GO:0061037 eggNOG:NOG297448 GeneTree:ENSGT00680000099662
HOGENOM:HOG000010312 EMBL:X56674 EMBL:X57341 EMBL:X57340
EMBL:X57339 EMBL:S75943 EMBL:X59473 EMBL:S63196 IPI:IPI00580878
IPI:IPI00589689 PIR:A43786 PIR:I51272 PIR:S13512 RefSeq:NP_990657.1
UniGene:Gga.2668 UniGene:Gga.51498 ProteinModelPortal:P22448
SMR:P22448 STRING:P22448 Ensembl:ENSGALT00000037748 GeneID:396266
KEGG:gga:396266 CTD:5915 InParanoid:P22448 KO:K08528
NextBio:20816318 ArrayExpress:P22448 Uniprot:P22448
Length = 455
Score = 190 (71.9 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 39/95 (41%), Positives = 51/95 (53%)
Query: 34 PTPPSPS------QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPV 87
P+PPSP + C VC D ++ HYGV CEGCKGFF+R++QK Y C DK C +
Sbjct: 73 PSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCVI 132
Query: 88 DXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRR 122
+ C +VGM KE VR D K ++
Sbjct: 133 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKK 167
Score = 126 (49.4 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 227 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIF 286
+F L T + I FA ++PGF+ L DQ L ++A L++ +LR+ R E + F
Sbjct: 227 KFSELATKCIIKIVEFAKRLPGFTSLTIADQITLLKAACLDILILRICTRYTPEQDTMTF 286
Query: 287 CNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+G+ L + Q + FG + + F L +E+D + L A+ LI
Sbjct: 287 SDGLTLNRTQMHNAGFGP-LTDLVFTFANQLLPLEMDDTETGLLSAICLI 335
Score = 66 (28.3 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 166 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
+F L T + I FA ++PGF+ L DQ L ++A L++
Sbjct: 227 KFSELATKCIIKIVEFAKRLPGFTSLTIADQITLLKAACLDI 268
Score = 38 (18.4 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 202 SASLELFYREPNPLEPP 218
++S EL P+PL PP
Sbjct: 66 TSSEELVPSPPSPLPPP 82
>ZFIN|ZDB-GENE-040616-2 [details] [associations]
symbol:esrrb "estrogen-related receptor beta"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040616-2 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 EMBL:CABZ01058931 EMBL:CABZ01058932
EMBL:CABZ01058933 EMBL:CABZ01073498 EMBL:CABZ01073499
EMBL:CABZ01073500 EMBL:CABZ01113871 IPI:IPI00504271
ProteinModelPortal:F1R2J7 Ensembl:ENSDART00000007600 Bgee:F1R2J7
Uniprot:F1R2J7
Length = 484
Score = 198 (74.8 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 37/84 (44%), Positives = 48/84 (57%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 148 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 207
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRR 122
CL+VGM++ VR D ++G R
Sbjct: 208 RFMKCLKVGMLRSGVRLDRVRGGR 231
Score = 115 (45.5 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 34/133 (25%), Positives = 65/133 (48%)
Query: 203 ASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIP-GFSDLCKEDQELLF 261
A E Y P+P P ++ + + L + VI +A IP GFS L DQ L
Sbjct: 268 AEPEKIYAMPDPTMPE-SDIKALTTLCDLADRELVVIIGWAKHIPAGFSSLSLGDQMSLL 326
Query: 262 QSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEI 321
QSA +E+ +L + +R+ + +L++ V++++ + + D +IL+ + +++
Sbjct: 327 QSAWMEILILSIVFRSLPYEDELVYAEDYVMDEEHSRLTGLLDLYLSILQLVRKYKKLKV 386
Query: 322 DISAFACLCALTL 334
+ F L A+ L
Sbjct: 387 EKEEFVTLKAIAL 399
Score = 72 (30.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 33/121 (27%), Positives = 53/121 (43%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIP-GFSDLCKEDQELLFQSASL 205
+Y P+P P ++ + + L + VI +A IP GFS L DQ L QSA +
Sbjct: 273 IYAMPDPTMPE-SDIKALTTLCDLADRELVVIIGWAKHIPAGFSSLSLGDQMSLLQSAWM 331
Query: 206 ELF-----YRE-PNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQEL 259
E+ +R P E AE + + +S LT +D+ + + L E +E
Sbjct: 332 EILILSIVFRSLPYEDELVYAEDYVMDEEHSRLTGLLDLYLSILQLVRKYKKLKVEKEEF 391
Query: 260 L 260
+
Sbjct: 392 V 392
>UNIPROTKB|E2R2A6 [details] [associations]
symbol:RARB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0061037 "negative regulation of cartilage
development" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0048048 "embryonic
eye morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0032331 "negative regulation of chondrocyte
differentiation" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003417
"growth plate cartilage development" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0008285 GO:GO:0022008
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0000122 GO:GO:0043065 GO:GO:0048566 GO:GO:0035264
GO:GO:0035116 GO:GO:0048048 GO:GO:0001657 GO:GO:0021756
GO:GO:0032331 GO:GO:0003417 GO:GO:0003708 GO:GO:0061037
GO:GO:0055012 GeneTree:ENSGT00680000099662 CTD:5915 KO:K08528
OMA:QEVFVCI EMBL:AAEX03013556 RefSeq:XP_850755.1
Ensembl:ENSCAFT00000009235 GeneID:477045 KEGG:cfa:477045
NextBio:20852594 Uniprot:E2R2A6
Length = 448
Score = 189 (71.6 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 39/95 (41%), Positives = 51/95 (53%)
Query: 34 PTPPSPS------QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPV 87
P+PPSP + C VC D ++ HYGV CEGCKGFF+R++QK Y C DK C +
Sbjct: 66 PSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVI 125
Query: 88 DXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRR 122
+ C +VGM KE VR D K ++
Sbjct: 126 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKK 160
Score = 125 (49.1 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 227 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIF 286
+F L T + I FA ++PGF+ L DQ L ++A L++ +LR+ R E + F
Sbjct: 220 KFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTF 279
Query: 287 CNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+G+ L + Q + FG + + F L +E+D + L A+ LI
Sbjct: 280 SDGLTLNRTQMHNAGFGP-LTDLVFTFANQLLPLEMDDTETGLLSAICLI 328
Score = 65 (27.9 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 166 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
+F L T + I FA ++PGF+ L DQ L ++A L++
Sbjct: 220 KFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDI 261
Score = 39 (18.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 196 QELLFQSASLE-LFYREPNPLEPP 218
Q + QS S E L P+PL PP
Sbjct: 52 QSIETQSTSSEELVPSPPSPLPPP 75
>RGD|3535 [details] [associations]
symbol:Rarb "retinoic acid receptor, beta" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001657 "ureteric bud
development" evidence=ISO] [GO:0003417 "growth plate cartilage
development" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003708 "retinoic
acid receptor activity" evidence=NAS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0008144 "drug binding" evidence=IDA] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0021756 "striatum
development" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0031641 "regulation of myelination" evidence=IDA] [GO:0032331
"negative regulation of chondrocyte differentiation" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=IPI] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=ISO] [GO:0035264
"multicellular organism growth" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043068 "positive
regulation of programmed cell death" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046965 "retinoid X receptor binding"
evidence=IPI] [GO:0048048 "embryonic eye morphogenesis" evidence=ISO]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=IDA]
[GO:0048566 "embryonic digestive tract development" evidence=ISO]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=ISO] [GO:0061037 "negative regulation of cartilage
development" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 RGD:3535 GO:GO:0005634 GO:GO:0046872 GO:GO:0008144
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045666 GO:GO:0031641
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448 HSSP:P10826
EMBL:AJ002942 IPI:IPI00763374 UniGene:Rn.232243
ProteinModelPortal:O54746 STRING:O54746 Genevestigator:O54746
Uniprot:O54746
Length = 291
Score = 192 (72.6 bits), Expect = 6.8e-22, Sum P(2) = 6.8e-22
Identities = 38/90 (42%), Positives = 49/90 (54%)
Query: 34 PTPPSPS-QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXX 92
P PP P + C VC D ++ HYGV CEGCKGFF+R++QK Y C DK C ++
Sbjct: 71 PLPPPPVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINKVTR 130
Query: 93 XXXXXXXXXXCLQVGMVKEVVRTDSLKGRR 122
C +VGM KE VR D K ++
Sbjct: 131 NRCQYCRLQKCFEVGMSKESVRNDRNKKKK 160
Score = 105 (42.0 bits), Expect = 6.8e-22, Sum P(2) = 6.8e-22
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 227 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIF 286
+F L T + I FA ++PGF+ L DQ L ++A L++ +LR+ R E + F
Sbjct: 220 KFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTF 279
Query: 287 CNGVVLEKQQ 296
+G+ L + Q
Sbjct: 280 SDGLTLNRTQ 289
Score = 65 (27.9 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 166 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
+F L T + I FA ++PGF+ L DQ L ++A L++
Sbjct: 220 KFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDI 261
>MGI|MGI:97857 [details] [associations]
symbol:Rarb "retinoic acid receptor, beta" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0001657 "ureteric bud
development" evidence=IMP] [GO:0003417 "growth plate cartilage
development" evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0008144 "drug binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IGI] [GO:0021756 "striatum development" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] [GO:0031641 "regulation of
myelination" evidence=ISO] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IMP] [GO:0032403 "protein
complex binding" evidence=ISO] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IGI] [GO:0035264 "multicellular organism
growth" evidence=IGI] [GO:0043065 "positive regulation of apoptotic
process" evidence=IGI] [GO:0043068 "positive regulation of
programmed cell death" evidence=IGI] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0048048 "embryonic eye morphogenesis"
evidence=IGI] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=ISO] [GO:0048566 "embryonic digestive tract
development" evidence=ISO] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IMP] [GO:0061037 "negative
regulation of cartilage development" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:97857 GO:GO:0005634 GO:GO:0008285
GO:GO:0022008 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0000122 GO:GO:0043065
GO:GO:0048566 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0001657 GO:GO:0021756 GO:GO:0032331 GO:GO:0003417
HOVERGEN:HBG005606 GO:GO:0003708 GO:GO:0061037 PDB:1XDK PDBsum:1XDK
GO:GO:0055012 eggNOG:NOG297448 HOGENOM:HOG000010312
OrthoDB:EOG4F7NK7 CTD:5915 KO:K08528 OMA:QEVFVCI EMBL:X56574
EMBL:X56569 EMBL:X56573 EMBL:S56660 EMBL:S92180 IPI:IPI00130386
IPI:IPI00230346 IPI:IPI00230347 IPI:IPI00230348 PIR:S05051
RefSeq:NP_035373.1 UniGene:Mm.259318 ProteinModelPortal:P22605
SMR:P22605 IntAct:P22605 STRING:P22605 PRIDE:P22605
Ensembl:ENSMUST00000063750 GeneID:218772 KEGG:mmu:218772
UCSC:uc007xvc.1 InParanoid:P22605 BindingDB:P22605
ChEMBL:CHEMBL3266 EvolutionaryTrace:P22605 NextBio:376409
Bgee:P22605 CleanEx:MM_RARB Genevestigator:P22605
GermOnline:ENSMUSG00000017491 Uniprot:P22605
Length = 482
Score = 189 (71.6 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 39/95 (41%), Positives = 51/95 (53%)
Query: 34 PTPPSPS------QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPV 87
P+PPSP + C VC D ++ HYGV CEGCKGFF+R++QK Y C DK C +
Sbjct: 100 PSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVI 159
Query: 88 DXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRR 122
+ C +VGM KE VR D K ++
Sbjct: 160 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKK 194
Score = 125 (49.1 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 227 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIF 286
+F L T + I FA ++PGF+ L DQ L ++A L++ +LR+ R E + F
Sbjct: 254 KFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTF 313
Query: 287 CNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+G+ L + Q + FG + + F L +E+D + L A+ LI
Sbjct: 314 SDGLTLNRTQMHNAGFGP-LTDLVFTFANQLLPLEMDDTETGLLSAICLI 362
Score = 65 (27.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 166 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
+F L T + I FA ++PGF+ L DQ L ++A L++
Sbjct: 254 KFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDI 295
Score = 38 (18.4 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 202 SASLELFYREPNPLEPP 218
++S EL P+PL PP
Sbjct: 93 TSSEELVPSPPSPLPPP 109
>UNIPROTKB|E1BX47 [details] [associations]
symbol:NR1H3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0010867 "positive regulation of
triglyceride biosynthetic process" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010875 "positive regulation of cholesterol
efflux" evidence=IEA] [GO:0010887 "negative regulation of
cholesterol storage" evidence=IEA] [GO:0032270 "positive regulation
of cellular protein metabolic process" evidence=IEA] [GO:0032369
"negative regulation of lipid transport" evidence=IEA] [GO:0032570
"response to progesterone stimulus" evidence=IEA] [GO:0032810
"sterol response element binding" evidence=IEA] [GO:0034145
"positive regulation of toll-like receptor 4 signaling pathway"
evidence=IEA] [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0043031 "negative regulation of macrophage activation"
evidence=IEA] [GO:0043277 "apoptotic cell clearance" evidence=IEA]
[GO:0044255 "cellular lipid metabolic process" evidence=IEA]
[GO:0045723 "positive regulation of fatty acid biosynthetic
process" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048550 "negative regulation of pinocytosis" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0051006 "positive regulation of lipoprotein
lipase activity" evidence=IEA] [GO:0070328 "triglyceride
homeostasis" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0090188 "negative regulation
of pancreatic juice secretion" evidence=IEA] [GO:0090341 "negative
regulation of secretion of lysosomal enzymes" evidence=IEA]
[GO:2000189 "positive regulation of cholesterol homeostasis"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0045893 GO:GO:0046872 GO:GO:0050728 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045861 GO:GO:0044255
GO:GO:0042632 GO:GO:0000122 GO:GO:0051006 GO:GO:0000790
GO:GO:2000189 GO:GO:0070328 GO:GO:0010867 GO:GO:0032570
GO:GO:0032270 GO:GO:0045723 GO:GO:0043031 GO:GO:0043277
GeneTree:ENSGT00680000099585 GO:GO:0010870 GO:GO:0032369
GO:GO:0034145 GO:GO:0032376 GO:GO:0048550 InterPro:IPR023257
PRINTS:PR02034 GO:GO:0032810 GO:GO:0090188 GO:GO:0090341
EMBL:AADN02033476 IPI:IPI00818168 Ensembl:ENSGALT00000038464
ArrayExpress:E1BX47 Uniprot:E1BX47
Length = 389
Score = 251 (93.4 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 77/303 (25%), Positives = 141/303 (46%)
Query: 34 PTPPS-PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXX 92
P P +++C+VCGD A+ HY V +CEGCKGFF+R+V KG++YVC C +D
Sbjct: 30 PAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAQYVCKNGGKCEMDMYMR 89
Query: 93 XXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYREPN 152
C + GM ++ V ++ + R +L T + R PN
Sbjct: 90 RKCQECRLRKCQEAGMREQYVLSEE-QIRLKKLKKQEDDQAR----------TVVVR-PN 137
Query: 153 PLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREP 212
P +PP P + L +++I +K+ C +Q + + + P
Sbjct: 138 PPQPP--SPS-----HQLTPEQLNMI----EKLVAAQQQC--NQRSFTDRLKVTPWPQVP 184
Query: 213 NPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLR 272
+P A ++ F L SV I FA ++PGF +L +EDQ L +++++E+ +L
Sbjct: 185 DPNNRE-ARQQRFAHFTELAIISVQEIVDFAKQLPGFRELTREDQIALLKTSTIEVMLLE 243
Query: 273 LAYRTRAEDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCA 331
+ R E + F + + ++ +++N I EF + ++ ++++ + +A L A
Sbjct: 244 TSRRYNPEIESITFLKDLSYNRDDFAKAGLQFEFINPIFEFSKGMNELQLNDAEYALLIA 303
Query: 332 LTL 334
+ +
Sbjct: 304 INI 306
>MGI|MGI:1352462 [details] [associations]
symbol:Nr1h3 "nuclear receptor subfamily 1, group H, member
3" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006633 "fatty acid
biosynthetic process" evidence=TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010867 "positive regulation of triglyceride
biosynthetic process" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=ISO;IDA] [GO:0010887 "negative regulation of cholesterol
storage" evidence=ISO;IGI] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IDA] [GO:0032270 "positive
regulation of cellular protein metabolic process" evidence=ISO]
[GO:0032369 "negative regulation of lipid transport" evidence=ISO]
[GO:0032376 "positive regulation of cholesterol transport"
evidence=ISO] [GO:0032570 "response to progesterone stimulus"
evidence=ISO] [GO:0032810 "sterol response element binding"
evidence=ISO] [GO:0034145 "positive regulation of toll-like
receptor 4 signaling pathway" evidence=ISO] [GO:0042632
"cholesterol homeostasis" evidence=IGI] [GO:0043031 "negative
regulation of macrophage activation" evidence=IDA] [GO:0043277
"apoptotic cell clearance" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO;IDA]
[GO:0044255 "cellular lipid metabolic process" evidence=IDA]
[GO:0045723 "positive regulation of fatty acid biosynthetic
process" evidence=ISO] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] [GO:0048550 "negative regulation of pinocytosis"
evidence=ISO] [GO:0050728 "negative regulation of inflammatory
response" evidence=IDA] [GO:0051006 "positive regulation of
lipoprotein lipase activity" evidence=ISO] [GO:0055088 "lipid
homeostasis" evidence=IGI;IMP] [GO:0055092 "sterol homeostasis"
evidence=IMP] [GO:0070328 "triglyceride homeostasis"
evidence=IGI;IMP] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=ISO;IDA] [GO:0090188 "negative
regulation of pancreatic juice secretion" evidence=IMP] [GO:0090341
"negative regulation of secretion of lysosomal enzymes"
evidence=IMP] [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
MGI:MGI:1352462 GO:GO:0005634 GO:GO:0005737 GO:GO:0008286
GO:GO:0046872 GO:GO:0003677 GO:GO:0050728 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0045861
GO:GO:0006633 GO:GO:0071222 GO:GO:0042632 GO:GO:0010887
GO:GO:0010875 GO:GO:0000122 GO:GO:0051006 GO:GO:0000790
GO:GO:2000189 GO:GO:0070328 GO:GO:0010867 GO:GO:0032570
GO:GO:0032270 GO:GO:0045723 GO:GO:0043031 GO:GO:0043277
eggNOG:NOG285805 GeneTree:ENSGT00680000099585 GO:GO:0010870
GO:GO:0032369 GO:GO:0034145 EMBL:AL691450 GO:GO:0048550
HOVERGEN:HBG108655 OrthoDB:EOG4DV5M7 InterPro:IPR023257
PRINTS:PR02034 HOGENOM:HOG000220845 CTD:10062 KO:K08536 OMA:CILREEA
GO:GO:0032810 GO:GO:0090188 GO:GO:0090341 EMBL:AJ132599
EMBL:AJ132600 EMBL:AJ132601 EMBL:AF085745 IPI:IPI00129650
RefSeq:NP_001171201.1 RefSeq:NP_038867.2 UniGene:Mm.22690 PDB:2ACL
PDB:3FAL PDB:3FC6 PDBsum:2ACL PDBsum:3FAL PDBsum:3FC6
ProteinModelPortal:Q9Z0Y9 SMR:Q9Z0Y9 IntAct:Q9Z0Y9 STRING:Q9Z0Y9
PhosphoSite:Q9Z0Y9 PRIDE:Q9Z0Y9 Ensembl:ENSMUST00000002177
Ensembl:ENSMUST00000111354 Ensembl:ENSMUST00000111356 GeneID:22259
KEGG:mmu:22259 InParanoid:Q9Z0Y9 EvolutionaryTrace:Q9Z0Y9
NextBio:302349 Bgee:Q9Z0Y9 CleanEx:MM_NR1H3 Genevestigator:Q9Z0Y9
GermOnline:ENSMUSG00000002108 Uniprot:Q9Z0Y9
Length = 445
Score = 183 (69.5 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 36/84 (42%), Positives = 50/84 (59%)
Query: 34 PTPPS-PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXX 92
P P ++LC+VCGD A+ HY V +CEGCKGFF+R+V KG++YVC + CP+D
Sbjct: 86 PAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGARYVCHSGGHCPMDTYMR 145
Query: 93 XXXXXXXXXXCLQVGMVKEVVRTD 116
C Q GM +E V ++
Sbjct: 146 RKCQECRLRKCRQAGMREECVLSE 169
Score = 126 (49.4 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 30/124 (24%), Positives = 65/124 (52%)
Query: 212 PNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVL 271
P+P + A ++ F L SV I FA ++PGF L +EDQ L +++++E+ +L
Sbjct: 240 PDP-QSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL 298
Query: 272 RLAYRTRAEDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLC 330
+ R + F ++ ++ +++N I EF ++++ ++++ + FA L
Sbjct: 299 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI 358
Query: 331 ALTL 334
A+++
Sbjct: 359 AISI 362
Score = 85 (35.0 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 151 PNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYR 210
P+P + A ++ F L SV I FA ++PGF L +EDQ L +++++E+
Sbjct: 240 PDP-QSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL 298
Query: 211 EPNPLEPPIAE 221
E + P +E
Sbjct: 299 ETSRRYNPGSE 309
>UNIPROTKB|Q5E9B6 [details] [associations]
symbol:NR1H3 "Oxysterols receptor LXR-alpha" species:9913
"Bos taurus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0044255 "cellular
lipid metabolic process" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0046965 "retinoid X receptor binding"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0090341 "negative regulation of
secretion of lysosomal enzymes" evidence=IEA] [GO:0090188 "negative
regulation of pancreatic juice secretion" evidence=IEA] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IEA] [GO:0070328
"triglyceride homeostasis" evidence=IEA] [GO:0051006 "positive
regulation of lipoprotein lipase activity" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0048550 "negative regulation of pinocytosis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045861
"negative regulation of proteolysis" evidence=IEA] [GO:0045723
"positive regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0043277 "apoptotic cell clearance" evidence=IEA]
[GO:0043031 "negative regulation of macrophage activation"
evidence=IEA] [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0034145 "positive regulation of toll-like receptor 4 signaling
pathway" evidence=IEA] [GO:0032810 "sterol response element
binding" evidence=IEA] [GO:0032570 "response to progesterone
stimulus" evidence=IEA] [GO:0032369 "negative regulation of lipid
transport" evidence=IEA] [GO:0032270 "positive regulation of
cellular protein metabolic process" evidence=IEA] [GO:0010887
"negative regulation of cholesterol storage" evidence=IEA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0010867 "positive
regulation of triglyceride biosynthetic process" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045892
GO:GO:0045893 GO:GO:0046872 GO:GO:0050728 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045861 GO:GO:0044255
GO:GO:0042632 GO:GO:0000122 GO:GO:0051006 GO:GO:0000790
GO:GO:2000189 GO:GO:0070328 GO:GO:0010867 GO:GO:0032570
GO:GO:0032270 GO:GO:0045723 GO:GO:0046965 GO:GO:0043031
GO:GO:0043277 eggNOG:NOG285805 GeneTree:ENSGT00680000099585
GO:GO:0010870 GO:GO:0032369 GO:GO:0034145 GO:GO:0032376
GO:GO:0048550 HOVERGEN:HBG108655 OrthoDB:EOG4DV5M7
InterPro:IPR023257 PRINTS:PR02034 HOGENOM:HOG000220845
EMBL:BT021004 EMBL:BC103207 IPI:IPI00716440 RefSeq:NP_001014861.1
UniGene:Bt.88106 ProteinModelPortal:Q5E9B6 SMR:Q5E9B6 STRING:Q5E9B6
PRIDE:Q5E9B6 Ensembl:ENSBTAT00000014131 GeneID:507176
KEGG:bta:507176 CTD:10062 InParanoid:Q5E9B6 KO:K08536 OMA:CILREEA
NextBio:20867938 GO:GO:0032810 GO:GO:0090188 GO:GO:0090341
Uniprot:Q5E9B6
Length = 447
Score = 183 (69.5 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 36/84 (42%), Positives = 50/84 (59%)
Query: 34 PTPPS-PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXX 92
P P ++LC+VCGD A+ HY V +CEGCKGFF+R+V KG++YVC + CP+D
Sbjct: 88 PAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGARYVCHSGGHCPMDTYMR 147
Query: 93 XXXXXXXXXXCLQVGMVKEVVRTD 116
C Q GM +E V ++
Sbjct: 148 RKCQECRLRKCRQAGMREECVLSE 171
Score = 126 (49.4 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 30/124 (24%), Positives = 65/124 (52%)
Query: 212 PNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVL 271
P+P + A ++ F L SV I FA ++PGF L +EDQ L +++++E+ +L
Sbjct: 242 PDP-QSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL 300
Query: 272 RLAYRTRAEDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLC 330
+ R + F ++ ++ +++N I EF ++++ ++++ + FA L
Sbjct: 301 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI 360
Query: 331 ALTL 334
A+++
Sbjct: 361 AISI 364
Score = 85 (35.0 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 151 PNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYR 210
P+P + A ++ F L SV I FA ++PGF L +EDQ L +++++E+
Sbjct: 242 PDP-QSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL 300
Query: 211 EPNPLEPPIAE 221
E + P +E
Sbjct: 301 ETSRRYNPGSE 311
Score = 37 (18.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 105 QVGMVKEVVRTDSLKGRR 122
Q+GM++++V L RR
Sbjct: 210 QLGMIEKLVAAQQLCNRR 227
>UNIPROTKB|Q4TU03 [details] [associations]
symbol:LXRA "Liver X receptor alpha" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0046965
"retinoid X receptor binding" evidence=ISS] [GO:0044255 "cellular
lipid metabolic process" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:2000189 "positive
regulation of cholesterol homeostasis" evidence=IEA] [GO:0090341
"negative regulation of secretion of lysosomal enzymes"
evidence=IEA] [GO:0090188 "negative regulation of pancreatic juice
secretion" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0070328 "triglyceride
homeostasis" evidence=IEA] [GO:0051006 "positive regulation of
lipoprotein lipase activity" evidence=IEA] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA] [GO:0048550
"negative regulation of pinocytosis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0045723 "positive regulation of
fatty acid biosynthetic process" evidence=IEA] [GO:0043277
"apoptotic cell clearance" evidence=IEA] [GO:0043031 "negative
regulation of macrophage activation" evidence=IEA] [GO:0042632
"cholesterol homeostasis" evidence=IEA] [GO:0034145 "positive
regulation of toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0032810 "sterol response element binding" evidence=IEA]
[GO:0032570 "response to progesterone stimulus" evidence=IEA]
[GO:0032369 "negative regulation of lipid transport" evidence=IEA]
[GO:0032270 "positive regulation of cellular protein metabolic
process" evidence=IEA] [GO:0010887 "negative regulation of
cholesterol storage" evidence=IEA] [GO:0010875 "positive regulation
of cholesterol efflux" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010867 "positive regulation of triglyceride biosynthetic
process" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872
GO:GO:0050728 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045861 GO:GO:0044255 GO:GO:0042632 GO:GO:0000122
GO:GO:0051006 GO:GO:0000790 GO:GO:2000189 GO:GO:0070328
GO:GO:0010867 GO:GO:0032570 GO:GO:0032270 GO:GO:0045723
GO:GO:0046965 GO:GO:0043031 GO:GO:0043277
GeneTree:ENSGT00680000099585 GO:GO:0010870 GO:GO:0032369
GO:GO:0034145 GO:GO:0032376 GO:GO:0048550 HOVERGEN:HBG108655
InterPro:IPR023257 PRINTS:PR02034 CTD:10062 KO:K08536 OMA:CILREEA
GO:GO:0032810 GO:GO:0090188 GO:GO:0090341 EMBL:CU469364
EMBL:DQ059138 EMBL:AB254406 RefSeq:NP_001095284.1 UniGene:Ssc.48215
SMR:Q4TU03 STRING:Q4TU03 Ensembl:ENSSSCT00000014461 GeneID:397553
KEGG:ssc:397553 Uniprot:Q4TU03
Length = 447
Score = 183 (69.5 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 36/84 (42%), Positives = 50/84 (59%)
Query: 34 PTPPS-PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXX 92
P P ++LC+VCGD A+ HY V +CEGCKGFF+R+V KG++YVC + CP+D
Sbjct: 88 PAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGARYVCHSGGHCPMDTYMR 147
Query: 93 XXXXXXXXXXCLQVGMVKEVVRTD 116
C Q GM +E V ++
Sbjct: 148 RKCQECRLRKCRQAGMREECVLSE 171
Score = 126 (49.4 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 30/124 (24%), Positives = 65/124 (52%)
Query: 212 PNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVL 271
P+P + A ++ F L SV I FA ++PGF L +EDQ L +++++E+ +L
Sbjct: 242 PDP-QSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL 300
Query: 272 RLAYRTRAEDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLC 330
+ R + F ++ ++ +++N I EF ++++ ++++ + FA L
Sbjct: 301 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI 360
Query: 331 ALTL 334
A+++
Sbjct: 361 AISI 364
Score = 85 (35.0 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 151 PNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYR 210
P+P + A ++ F L SV I FA ++PGF L +EDQ L +++++E+
Sbjct: 242 PDP-QSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL 300
Query: 211 EPNPLEPPIAE 221
E + P +E
Sbjct: 301 ETSRRYNPGSE 311
>UNIPROTKB|F1M839 [details] [associations]
symbol:Esr1 "Estrogen receptor" species:10116 "Rattus
norvegicus" [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0001547 "antral ovarian follicle growth"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008209 "androgen metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0010629
"negative regulation of gene expression" evidence=IEA] [GO:0034056
"estrogen response element binding" evidence=IEA] [GO:0038052
"estrogen-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045429 "positive regulation of nitric
oxide biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=IEA] [GO:0048386 "positive regulation of
retinoic acid receptor signaling pathway" evidence=IEA] [GO:0051000
"positive regulation of nitric-oxide synthase activity"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060065 "uterus development" evidence=IEA] [GO:0060068 "vagina
development" evidence=IEA] [GO:0060523 "prostate epithelial cord
elongation" evidence=IEA] [GO:0060527 "prostate epithelial cord
arborization involved in prostate glandular acinus morphogenesis"
evidence=IEA] [GO:0060687 "regulation of branching involved in
prostate gland morphogenesis" evidence=IEA] [GO:0060745 "mammary
gland branching involved in pregnancy" evidence=IEA] [GO:0060749
"mammary gland alveolus development" evidence=IEA] [GO:0060750
"epithelial cell proliferation involved in mammary gland duct
elongation" evidence=IEA] [GO:0071391 "cellular response to
estrogen stimulus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00543 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:2581 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0051091 GO:GO:0042981
GO:GO:0005496 GO:GO:0046872 GO:GO:0051000 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003682 GO:GO:0008584 GO:GO:0043124 GO:GO:0008209
GO:GO:0010629 GO:GO:0043433 GO:GO:0060749 GO:GO:0045429
GO:GO:0048146 GO:GO:0048386 GeneTree:ENSGT00700000104072
GO:GO:0060750 GO:GO:0030520 GO:GO:0002064 GO:GO:0060068
GO:GO:0001046 GO:GO:0071391 GO:GO:0060687 GO:GO:0001547
GO:GO:0034056 GO:GO:0038052 GO:GO:0060745 GO:GO:0060527
GO:GO:0060523 GO:GO:0060065 IPI:IPI00201392
Ensembl:ENSRNOT00000026350 ArrayExpress:F1M839 Uniprot:F1M839
Length = 462
Score = 181 (68.8 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 187 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 246
Query: 100 XXXCLQVGMVKEVVRTDSLKGR 121
C +VGM+K +R D GR
Sbjct: 247 LRKCYEVGMMKGGIRKDRRGGR 268
Score = 129 (50.5 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 40/161 (24%), Positives = 72/161 (44%)
Query: 177 VIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSV 236
VI+H P S L + A L Y E +P P +E + +L +
Sbjct: 302 VIKHTKKNSPALS-LTADQMVSALLDAEPPLIYSEYDPSRP-FSEASMMGLLTNLADREL 359
Query: 237 DVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQ 296
+ ++A ++PGF DL DQ L + A LE+ ++ L +R+ KL+F ++L++ Q
Sbjct: 360 VHMINWAKRVPGFGDLNLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQ 419
Query: 297 --CQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
C + + + +L +M + F CL ++ L+
Sbjct: 420 GKCVEGMVEIF-DMLLATSSRFRMMNLQGEEFVCLKSIILL 459
Score = 65 (27.9 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
+Y E +P P +E + +L + + ++A ++PGF DL DQ L + A LE
Sbjct: 332 IYSEYDPSRP-FSEASMMGLLTNLADRELVHMINWAKRVPGFGDLNLHDQVHLLECAWLE 390
Query: 207 L 207
+
Sbjct: 391 I 391
>RGD|61909 [details] [associations]
symbol:Nr1h3 "nuclear receptor subfamily 1, group H, member 3"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000790 "nuclear chromatin" evidence=IEA;ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0003707
"steroid hormone receptor activity" evidence=IEA;TAS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006629 "lipid metabolic process" evidence=IEP] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEP] [GO:0010867 "positive regulation of
triglyceride biosynthetic process" evidence=IEA;ISO] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA;ISO] [GO:0010875 "positive regulation of cholesterol
efflux" evidence=IEA;ISO] [GO:0010887 "negative regulation of
cholesterol storage" evidence=IEA;ISO] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=ISO] [GO:0032270
"positive regulation of cellular protein metabolic process"
evidence=IEA;ISO] [GO:0032369 "negative regulation of lipid
transport" evidence=IEA;ISO] [GO:0032376 "positive regulation of
cholesterol transport" evidence=ISO] [GO:0032570 "response to
progesterone stimulus" evidence=IEA;ISO] [GO:0032810 "sterol
response element binding" evidence=IEA;ISO] [GO:0034145 "positive
regulation of toll-like receptor 4 signaling pathway"
evidence=IEA;ISO] [GO:0042632 "cholesterol homeostasis"
evidence=IEA;ISO] [GO:0043031 "negative regulation of macrophage
activation" evidence=IEA;ISO] [GO:0043277 "apoptotic cell clearance"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0044255 "cellular lipid metabolic
process" evidence=IEA;ISO] [GO:0045723 "positive regulation of fatty
acid biosynthetic process" evidence=IEA;ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046965 "retinoid
X receptor binding" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0048550 "negative
regulation of pinocytosis" evidence=IEA;ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA;ISO] [GO:0051006
"positive regulation of lipoprotein lipase activity"
evidence=IEA;ISO] [GO:0055088 "lipid homeostasis" evidence=ISO]
[GO:0055092 "sterol homeostasis" evidence=ISO] [GO:0070328
"triglyceride homeostasis" evidence=IEA;ISO] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IEA;ISO] [GO:0090188
"negative regulation of pancreatic juice secretion"
evidence=IEA;ISO] [GO:0090341 "negative regulation of secretion of
lysosomal enzymes" evidence=IEA;ISO] [GO:2000189 "positive
regulation of cholesterol homeostasis" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:61909 GO:GO:0005634 GO:GO:0005737
GO:GO:0008286 GO:GO:0045893 GO:GO:0046872 GO:GO:0050728
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006629
GO:GO:0045861 GO:GO:0044255 GO:GO:0042632 GO:GO:0000122
GO:GO:0051006 GO:GO:0000790 GO:GO:2000189 GO:GO:0070328
GO:GO:0010867 GO:GO:0046982 GO:GO:0032570 GO:GO:0032270
GO:GO:0045723 GO:GO:0043031 GO:GO:0043277 eggNOG:NOG285805
GO:GO:0010870 GO:GO:0032369 GO:GO:0034145 GO:GO:0032376
GO:GO:0048550 HOVERGEN:HBG108655 OrthoDB:EOG4DV5M7
InterPro:IPR023257 PRINTS:PR02034 HOGENOM:HOG000220845 GO:GO:0032810
GO:GO:0090188 GO:GO:0090341 EMBL:U11685 IPI:IPI00207179 PIR:A56043
UniGene:Rn.11209 ProteinModelPortal:Q62685 SMR:Q62685 STRING:Q62685
PhosphoSite:Q62685 PRIDE:Q62685 UCSC:RGD:61909 InParanoid:Q62685
ArrayExpress:Q62685 Genevestigator:Q62685
GermOnline:ENSRNOG00000013172 Uniprot:Q62685
Length = 445
Score = 180 (68.4 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 34/84 (40%), Positives = 49/84 (58%)
Query: 34 PTPPS-PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXX 92
P P ++LC+VCGD A+ HY V +CEGCKGFF+R+V KG++Y+C + CP+D
Sbjct: 86 PAPKMLGNELCSVCGDKASAFHYNVLSCEGCKGFFRRSVIKGARYICHSGGHCPMDTYMR 145
Query: 93 XXXXXXXXXXCLQVGMVKEVVRTD 116
C GM +E V ++
Sbjct: 146 RKCQECRLRKCRHAGMREECVLSE 169
Score = 129 (50.5 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 31/124 (25%), Positives = 65/124 (52%)
Query: 212 PNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVL 271
P+P + A ++ F L SV I FA ++PGF L +EDQ L +++++E+ +L
Sbjct: 240 PDP-QSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL 298
Query: 272 RLAYRTRAEDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLC 330
+ R + F ++ ++ +++N I EF +S++ ++++ + FA L
Sbjct: 299 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRSMNELQLNDAEFALLI 358
Query: 331 ALTL 334
A+++
Sbjct: 359 AISI 362
Score = 85 (35.0 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 151 PNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYR 210
P+P + A ++ F L SV I FA ++PGF L +EDQ L +++++E+
Sbjct: 240 PDP-QSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL 298
Query: 211 EPNPLEPPIAE 221
E + P +E
Sbjct: 299 ETSRRYNPGSE 309
>UNIPROTKB|Q62685 [details] [associations]
symbol:Nr1h3 "Oxysterols receptor LXR-alpha" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:61909 GO:GO:0005634 GO:GO:0005737
GO:GO:0008286 GO:GO:0045893 GO:GO:0046872 GO:GO:0050728
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006629
GO:GO:0045861 GO:GO:0044255 GO:GO:0042632 GO:GO:0000122
GO:GO:0051006 GO:GO:0000790 GO:GO:2000189 GO:GO:0070328
GO:GO:0010867 GO:GO:0046982 GO:GO:0032570 GO:GO:0032270
GO:GO:0045723 GO:GO:0043031 GO:GO:0043277 eggNOG:NOG285805
GO:GO:0010870 GO:GO:0032369 GO:GO:0034145 GO:GO:0032376
GO:GO:0048550 HOVERGEN:HBG108655 OrthoDB:EOG4DV5M7
InterPro:IPR023257 PRINTS:PR02034 HOGENOM:HOG000220845
GO:GO:0032810 GO:GO:0090188 GO:GO:0090341 EMBL:U11685
IPI:IPI00207179 PIR:A56043 UniGene:Rn.11209
ProteinModelPortal:Q62685 SMR:Q62685 STRING:Q62685
PhosphoSite:Q62685 PRIDE:Q62685 UCSC:RGD:61909 InParanoid:Q62685
ArrayExpress:Q62685 Genevestigator:Q62685
GermOnline:ENSRNOG00000013172 Uniprot:Q62685
Length = 445
Score = 180 (68.4 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 34/84 (40%), Positives = 49/84 (58%)
Query: 34 PTPPS-PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXX 92
P P ++LC+VCGD A+ HY V +CEGCKGFF+R+V KG++Y+C + CP+D
Sbjct: 86 PAPKMLGNELCSVCGDKASAFHYNVLSCEGCKGFFRRSVIKGARYICHSGGHCPMDTYMR 145
Query: 93 XXXXXXXXXXCLQVGMVKEVVRTD 116
C GM +E V ++
Sbjct: 146 RKCQECRLRKCRHAGMREECVLSE 169
Score = 129 (50.5 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 31/124 (25%), Positives = 65/124 (52%)
Query: 212 PNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVL 271
P+P + A ++ F L SV I FA ++PGF L +EDQ L +++++E+ +L
Sbjct: 240 PDP-QSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL 298
Query: 272 RLAYRTRAEDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLC 330
+ R + F ++ ++ +++N I EF +S++ ++++ + FA L
Sbjct: 299 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRSMNELQLNDAEFALLI 358
Query: 331 ALTL 334
A+++
Sbjct: 359 AISI 362
Score = 85 (35.0 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 151 PNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYR 210
P+P + A ++ F L SV I FA ++PGF L +EDQ L +++++E+
Sbjct: 240 PDP-QSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL 298
Query: 211 EPNPLEPPIAE 221
E + P +E
Sbjct: 299 ETSRRYNPGSE 309
>UNIPROTKB|Q8JHU1 [details] [associations]
symbol:LXR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0010867 "positive regulation of
triglyceride biosynthetic process" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010875 "positive regulation of cholesterol
efflux" evidence=IEA] [GO:0010887 "negative regulation of
cholesterol storage" evidence=IEA] [GO:0032270 "positive regulation
of cellular protein metabolic process" evidence=IEA] [GO:0032369
"negative regulation of lipid transport" evidence=IEA] [GO:0032570
"response to progesterone stimulus" evidence=IEA] [GO:0032810
"sterol response element binding" evidence=IEA] [GO:0034145
"positive regulation of toll-like receptor 4 signaling pathway"
evidence=IEA] [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0043031 "negative regulation of macrophage activation"
evidence=IEA] [GO:0043277 "apoptotic cell clearance" evidence=IEA]
[GO:0044255 "cellular lipid metabolic process" evidence=IEA]
[GO:0045723 "positive regulation of fatty acid biosynthetic
process" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0048550 "negative regulation of
pinocytosis" evidence=IEA] [GO:0050728 "negative regulation of
inflammatory response" evidence=IEA] [GO:0051006 "positive
regulation of lipoprotein lipase activity" evidence=IEA]
[GO:0070328 "triglyceride homeostasis" evidence=IEA] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IEA] [GO:0090188
"negative regulation of pancreatic juice secretion" evidence=IEA]
[GO:0090341 "negative regulation of secretion of lysosomal enzymes"
evidence=IEA] [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0035326 "enhancer binding" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0046872 GO:GO:0050728 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0045861
GO:GO:0044255 GO:GO:0042632 GO:GO:0000122 GO:GO:0051006
GO:GO:0000790 GO:GO:2000189 GO:GO:0070328 GO:GO:0010867
GO:GO:0032570 GO:GO:0032270 GO:GO:0045723 GO:GO:0043031
GO:GO:0043277 GeneTree:ENSGT00680000099585 GO:GO:0010870
GO:GO:0032369 GO:GO:0034145 GO:GO:0035326 GO:GO:0032376
GO:GO:0048550 HOVERGEN:HBG108655 InterPro:IPR023257 PRINTS:PR02034
CTD:10062 KO:K08536 OMA:CILREEA GO:GO:0032810 GO:GO:0090188
GO:GO:0090341 EMBL:AADN02033476 EMBL:AF492498 EMBL:AJ851708
IPI:IPI00601536 RefSeq:NP_989873.1 UniGene:Gga.4130 HSSP:P55055
SMR:Q8JHU1 STRING:Q8JHU1 Ensembl:ENSGALT00000013356 GeneID:395221
KEGG:gga:395221 InParanoid:Q8JHU1 NextBio:20815310 Uniprot:Q8JHU1
Length = 409
Score = 251 (93.4 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 77/303 (25%), Positives = 141/303 (46%)
Query: 34 PTPPS-PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXX 92
P P +++C+VCGD A+ HY V +CEGCKGFF+R+V KG++YVC C +D
Sbjct: 50 PAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAQYVCKNGGKCEMDMYMR 109
Query: 93 XXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYREPN 152
C + GM ++ V ++ + R +L T + R PN
Sbjct: 110 RKCQECRLRKCQEAGMREQYVLSEE-QIRLKKLKKQEDDQAR----------TVVVR-PN 157
Query: 153 PLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREP 212
P +PP P + L +++I +K+ C +Q + + + P
Sbjct: 158 PPQPP--SPS-----HQLTPEQLNMI----EKLVAAQQQC--NQRSFTDRLKVTPWPQVP 204
Query: 213 NPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLR 272
+P A ++ F L SV I FA ++PGF +L +EDQ L +++++E+ +L
Sbjct: 205 DPNNRE-ARQQRFAHFTELAIISVQEIVDFAKQLPGFRELTREDQIALLKTSTIEVMLLE 263
Query: 273 LAYRTRAEDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCA 331
+ R E + F + + ++ +++N I EF + ++ ++++ + +A L A
Sbjct: 264 TSRRYNPEIESITFLKDLSYNRDDFAKAGLQFEFINPIFEFSKGMNELQLNDAEYALLIA 323
Query: 332 LTL 334
+ +
Sbjct: 324 INI 326
>UNIPROTKB|F6SD09 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AL356311
EMBL:AL049821 EMBL:AL078582 EMBL:AL590993 HGNC:HGNC:3467
ChiTaRS:ESR1 EMBL:AL035695 IPI:IPI00922288
ProteinModelPortal:F6SD09 SMR:F6SD09 Ensembl:ENST00000544394
UCSC:uc011eey.2 ArrayExpress:F6SD09 Bgee:F6SD09 Uniprot:F6SD09
Length = 310
Score = 181 (68.8 bits), Expect = 5.1e-21, Sum P(2) = 5.1e-21
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 9 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 68
Query: 100 XXXCLQVGMVKEVVRTDSLKGR 121
C +VGM+K +R D GR
Sbjct: 69 LRKCYEVGMMKGGIRKDRRGGR 90
Score = 117 (46.2 bits), Expect = 5.1e-21, Sum P(2) = 5.1e-21
Identities = 32/131 (24%), Positives = 63/131 (48%)
Query: 207 LFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASL 266
+ Y E +P P +E + +L + + ++A ++PGF DL DQ L + A L
Sbjct: 153 ILYSEYDPTRP-FSEASMMGLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWL 211
Query: 267 ELFVLRLAYRTRAEDTKLIFCNGVVLEKQQ--CQRSFGDDWLNAILEFCQSLHLMEIDIS 324
E+ ++ L +R+ KL+F ++L++ Q C + + + +L +M +
Sbjct: 212 EILMIGLVWRSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIF-DMLLATSSRFRMMNLQGE 270
Query: 325 AFACLCALTLI 335
F CL ++ L+
Sbjct: 271 EFVCLKSIILL 281
Score = 68 (29.0 bits), Expect = 6.5e-16, Sum P(2) = 6.5e-16
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
LY E +P P +E + +L + + ++A ++PGF DL DQ L + A LE
Sbjct: 154 LYSEYDPTRP-FSEASMMGLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLE 212
Query: 207 L 207
+
Sbjct: 213 I 213
>UNIPROTKB|E5L8C9 [details] [associations]
symbol:ESR1 "Estrogen receptor alpha" species:9031 "Gallus
gallus" [GO:0005496 "steroid binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0001046 "core promoter
sequence-specific DNA binding" evidence=IEA] [GO:0001547 "antral
ovarian follicle growth" evidence=IEA] [GO:0002064 "epithelial cell
development" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008209 "androgen metabolic process" evidence=IEA] [GO:0008584
"male gonad development" evidence=IEA] [GO:0010629 "negative
regulation of gene expression" evidence=IEA] [GO:0034056 "estrogen
response element binding" evidence=IEA] [GO:0038052
"estrogen-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045429 "positive regulation of nitric
oxide biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=IEA] [GO:0048386 "positive regulation of
retinoic acid receptor signaling pathway" evidence=IEA] [GO:0051000
"positive regulation of nitric-oxide synthase activity"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060065 "uterus development" evidence=IEA] [GO:0060068 "vagina
development" evidence=IEA] [GO:0060523 "prostate epithelial cord
elongation" evidence=IEA] [GO:0060527 "prostate epithelial cord
arborization involved in prostate glandular acinus morphogenesis"
evidence=IEA] [GO:0060687 "regulation of branching involved in
prostate gland morphogenesis" evidence=IEA] [GO:0060745 "mammary
gland branching involved in pregnancy" evidence=IEA] [GO:0060749
"mammary gland alveolus development" evidence=IEA] [GO:0060750
"epithelial cell proliferation involved in mammary gland duct
elongation" evidence=IEA] [GO:0071391 "cellular response to
estrogen stimulus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00543
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0051091
GO:GO:0042981 GO:GO:0005496 GO:GO:0046872 GO:GO:0051000
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003682 GO:GO:0043124 GO:GO:0008209
GO:GO:0010629 GO:GO:0043433 GO:GO:0045429 GO:GO:0048146
GO:GO:0048386 GeneTree:ENSGT00700000104072 GO:GO:0030520
GO:GO:0001046 GO:GO:0071391 GO:GO:0060687 InterPro:IPR024736
Pfam:PF12743 IPI:IPI00594509 UniGene:Gga.650 GO:GO:0034056
GO:GO:0038052 OMA:YRPSSDN EMBL:AADN02025376 EMBL:AADN02025377
EMBL:AADN02025378 EMBL:AADN02025379 EMBL:AADN02025380 EMBL:HQ340611
Ensembl:ENSGALT00000021168 Uniprot:E5L8C9
Length = 589
Score = 181 (68.8 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 176 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 235
Query: 100 XXXCLQVGMVKEVVRTDSLKGR 121
C +VGM+K +R D GR
Sbjct: 236 LRKCYEVGMMKGGIRKDRRGGR 257
Score = 130 (50.8 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 42/167 (25%), Positives = 74/167 (44%)
Query: 171 LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYS 230
L TS V++H P S L E A + Y E +P P E + +
Sbjct: 285 LWTSPLVVKHNKKNSPALS-LTAEQMVSALLEAEPPIVYSEYDP-NRPFNEASMMTLLTN 342
Query: 231 LLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGV 290
L + + ++A ++PGF DL DQ L + A LE+ ++ L +R+ KL+F +
Sbjct: 343 LADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNL 402
Query: 291 VLEKQQ--CQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+L++ Q C + + + +L +M + F CL ++ L+
Sbjct: 403 LLDRNQGKCVEGMVEIF-DMLLATAARFRMMNLQGEEFVCLKSIILL 448
>UNIPROTKB|Q9QZJ5 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:10036 "Mesocricetus
auratus" [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0045429 "positive regulation of nitric
oxide biosynthetic process" evidence=ISS] [GO:0051000 "positive
regulation of nitric-oxide synthase activity" evidence=ISS]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00543
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005886 GO:GO:0005634 GO:GO:0005794 GO:GO:0051091
GO:GO:0005496 GO:GO:0046872 GO:GO:0051000 GO:GO:0043565
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0043124 GO:GO:0043433
GO:GO:0045429 HOVERGEN:HBG108344 GO:GO:0030284 InterPro:IPR024736
Pfam:PF12743 EMBL:AF181077 EMBL:AF184276 ProteinModelPortal:Q9QZJ5
SMR:Q9QZJ5 Uniprot:Q9QZJ5
Length = 595
Score = 181 (68.8 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 182 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 241
Query: 100 XXXCLQVGMVKEVVRTDSLKGR 121
C +VGM+K +R D GR
Sbjct: 242 LRKCYEVGMMKGGIRKDRRGGR 263
Score = 129 (50.5 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 40/161 (24%), Positives = 73/161 (45%)
Query: 177 VIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSV 236
VI+H P S L + A L Y E +P P +E + +L +
Sbjct: 297 VIKHTKKNSPALS-LTADQMVSALLDAEPPLIYSEYDPSRP-FSEASMMGLLTNLADREL 354
Query: 237 DVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQ 296
+ ++A ++PGF DL DQ L + A LE+ ++ L +R+ KL+F ++L++ Q
Sbjct: 355 VHMINWAKRVPGFGDLNLHDQVHLLECAWLEILMIGLIWRSMEHPGKLLFAPNLLLDRNQ 414
Query: 297 --CQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
C + + + +L +M++ F CL ++ L+
Sbjct: 415 GKCVEGMVEIF-DMLLATSARFRMMDLQGEEFVCLKSIILL 454
Score = 65 (27.9 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
+Y E +P P +E + +L + + ++A ++PGF DL DQ L + A LE
Sbjct: 327 IYSEYDPSRP-FSEASMMGLLTNLADRELVHMINWAKRVPGFGDLNLHDQVHLLECAWLE 385
Query: 207 L 207
+
Sbjct: 386 I 386
>UNIPROTKB|E2RS27 [details] [associations]
symbol:NR1H3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0090341 "negative regulation of
secretion of lysosomal enzymes" evidence=IEA] [GO:0090188 "negative
regulation of pancreatic juice secretion" evidence=IEA] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IEA] [GO:0070328
"triglyceride homeostasis" evidence=IEA] [GO:0051006 "positive
regulation of lipoprotein lipase activity" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0048550 "negative regulation of pinocytosis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045861
"negative regulation of proteolysis" evidence=IEA] [GO:0045723
"positive regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0044255 "cellular lipid metabolic process"
evidence=IEA] [GO:0043277 "apoptotic cell clearance" evidence=IEA]
[GO:0043031 "negative regulation of macrophage activation"
evidence=IEA] [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0034145 "positive regulation of toll-like receptor 4 signaling
pathway" evidence=IEA] [GO:0032810 "sterol response element
binding" evidence=IEA] [GO:0032570 "response to progesterone
stimulus" evidence=IEA] [GO:0032369 "negative regulation of lipid
transport" evidence=IEA] [GO:0032270 "positive regulation of
cellular protein metabolic process" evidence=IEA] [GO:0010887
"negative regulation of cholesterol storage" evidence=IEA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0010867 "positive
regulation of triglyceride biosynthetic process" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0045893 GO:GO:0046872
GO:GO:0050728 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045861 GO:GO:0044255 GO:GO:0042632 GO:GO:0000122
GO:GO:0051006 GO:GO:0000790 GO:GO:2000189 GO:GO:0070328
GO:GO:0010867 GO:GO:0032570 GO:GO:0032270 GO:GO:0045723
GO:GO:0043031 GO:GO:0043277 GeneTree:ENSGT00680000099585
GO:GO:0010870 GO:GO:0032369 GO:GO:0034145 GO:GO:0032376
GO:GO:0048550 InterPro:IPR023257 PRINTS:PR02034 OMA:CILREEA
GO:GO:0032810 GO:GO:0090188 GO:GO:0090341 EMBL:AAEX03011491
ProteinModelPortal:E2RS27 Ensembl:ENSCAFT00000014022 Uniprot:E2RS27
Length = 450
Score = 180 (68.4 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 36/84 (42%), Positives = 49/84 (58%)
Query: 34 PTPPS-PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXX 92
P P ++LC+VCGD A+ HY V +CEGCKGFF+R+V KG+ YVC + CP+D
Sbjct: 91 PAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYVCHSGGHCPMDTYMR 150
Query: 93 XXXXXXXXXXCLQVGMVKEVVRTD 116
C Q GM +E V ++
Sbjct: 151 RKCQECRLRKCRQAGMREECVLSE 174
Score = 126 (49.4 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 30/124 (24%), Positives = 65/124 (52%)
Query: 212 PNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVL 271
P+P + A ++ F L SV I FA ++PGF L +EDQ L +++++E+ +L
Sbjct: 245 PDP-QSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL 303
Query: 272 RLAYRTRAEDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLC 330
+ R + F ++ ++ +++N I EF ++++ ++++ + FA L
Sbjct: 304 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI 363
Query: 331 ALTL 334
A+++
Sbjct: 364 AISI 367
Score = 85 (35.0 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 151 PNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYR 210
P+P + A ++ F L SV I FA ++PGF L +EDQ L +++++E+
Sbjct: 245 PDP-QSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL 303
Query: 211 EPNPLEPPIAE 221
E + P +E
Sbjct: 304 ETSRRYNPGSE 314
>RGD|2581 [details] [associations]
symbol:Esr1 "estrogen receptor 1" species:10116 "Rattus norvegicus"
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=ISO] [GO:0001547 "antral ovarian follicle growth"
evidence=ISO] [GO:0002064 "epithelial cell development" evidence=ISO]
[GO:0002076 "osteoblast development" evidence=IEP] [GO:0003677 "DNA
binding" evidence=IMP] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=ISO] [GO:0005496 "steroid binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008209 "androgen metabolic process" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008584 "male gonad
development" evidence=ISO] [GO:0010629 "negative regulation of gene
expression" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0030284 "estrogen receptor activity"
evidence=IDA;TAS] [GO:0030315 "T-tubule" evidence=IDA] [GO:0030518
"intracellular steroid hormone receptor signaling pathway"
evidence=IDA] [GO:0030522 "intracellular receptor mediated signaling
pathway" evidence=ISO] [GO:0031798 "type 1 metabotropic glutamate
receptor binding" evidence=IPI] [GO:0032355 "response to estradiol
stimulus" evidence=IEP;ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0034056 "estrogen response element binding"
evidence=ISO] [GO:0038052 "estrogen-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0042562 "hormone binding" evidence=IDA;IMP]
[GO:0042802 "identical protein binding" evidence=ISO] [GO:0042981
"regulation of apoptotic process" evidence=ISO] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043124 "negative regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=ISO;ISS] [GO:0043195
"terminal bouton" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO;ISS] [GO:0043523 "regulation of neuron
apoptotic process" evidence=IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044429 "mitochondrial part" evidence=IDA]
[GO:0045429 "positive regulation of nitric oxide biosynthetic
process" evidence=ISO;ISS] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=ISO;TAS] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=ISO] [GO:0048386 "positive
regulation of retinoic acid receptor signaling pathway" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051000 "positive regulation of nitric-oxide synthase activity"
evidence=ISO;ISS] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO;ISS] [GO:0060011 "Sertoli cell proliferation"
evidence=IMP] [GO:0060065 "uterus development" evidence=ISO]
[GO:0060068 "vagina development" evidence=ISO] [GO:0060523 "prostate
epithelial cord elongation" evidence=ISO] [GO:0060527 "prostate
epithelial cord arborization involved in prostate glandular acinus
morphogenesis" evidence=ISO] [GO:0060687 "regulation of branching
involved in prostate gland morphogenesis" evidence=ISO] [GO:0060745
"mammary gland branching involved in pregnancy" evidence=ISO]
[GO:0060749 "mammary gland alveolus development" evidence=ISO]
[GO:0060750 "epithelial cell proliferation involved in mammary gland
duct elongation" evidence=ISO] [GO:0070374 "positive regulation of
ERK1 and ERK2 cascade" evidence=IDA] [GO:0071391 "cellular response
to estrogen stimulus" evidence=ISO] [GO:1901215 "negative regulation
of neuron death" evidence=IDA] InterPro:IPR000536 InterPro:IPR001292
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
Pfam:PF02159 PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00543 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:2581 GO:GO:0005634 GO:GO:0005794
GO:GO:0048471 GO:GO:0043234 GO:GO:0051091 GO:GO:0032403 GO:GO:0005496
GO:GO:0032355 GO:GO:0046872 GO:GO:0003677 GO:GO:0051000 GO:GO:0043204
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0070374 GO:GO:0045944 GO:GO:1901215 GO:GO:0042562 GO:GO:0043195
GO:GO:0003682 GO:GO:0030315 GO:GO:0002076 GO:GO:0043124 GO:GO:0008209
GO:GO:0010629 GO:GO:0043433 GO:GO:0045742 GO:GO:0060749 GO:GO:0045429
GO:GO:0048146 GO:GO:0043523 GO:GO:0048386 GO:GO:0060750 GO:GO:0030520
GO:GO:0060011 GO:GO:0002064 GO:GO:0060068 GO:GO:0001046 GO:GO:0071391
GO:GO:0060687 GO:GO:0001547 HOVERGEN:HBG108344 CTD:2099
eggNOG:NOG320746 HOGENOM:HOG000233468 KO:K08550 OrthoDB:EOG4JM7PP
GO:GO:0030284 InterPro:IPR024736 Pfam:PF12743 GO:GO:0044429
GO:GO:0034056 GO:GO:0038052 GO:GO:0060745 GO:GO:0060527 GO:GO:0060523
GO:GO:0060065 EMBL:Y00102 EMBL:X61098 IPI:IPI00201392 PIR:S07379
RefSeq:NP_036821.1 UniGene:Rn.10595 ProteinModelPortal:P06211
SMR:P06211 STRING:P06211 PhosphoSite:P06211 PRIDE:P06211 GeneID:24890
KEGG:rno:24890 UCSC:RGD:2581 InParanoid:P06211 BindingDB:P06211
ChEMBL:CHEMBL2724 NextBio:604756 ArrayExpress:P06211
Genevestigator:P06211 Uniprot:P06211
Length = 600
Score = 181 (68.8 bits), Expect = 8.3e-21, Sum P(2) = 8.3e-21
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 187 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 246
Query: 100 XXXCLQVGMVKEVVRTDSLKGR 121
C +VGM+K +R D GR
Sbjct: 247 LRKCYEVGMMKGGIRKDRRGGR 268
Score = 129 (50.5 bits), Expect = 8.3e-21, Sum P(2) = 8.3e-21
Identities = 40/161 (24%), Positives = 72/161 (44%)
Query: 177 VIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSV 236
VI+H P S L + A L Y E +P P +E + +L +
Sbjct: 302 VIKHTKKNSPALS-LTADQMVSALLDAEPPLIYSEYDPSRP-FSEASMMGLLTNLADREL 359
Query: 237 DVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQ 296
+ ++A ++PGF DL DQ L + A LE+ ++ L +R+ KL+F ++L++ Q
Sbjct: 360 VHMINWAKRVPGFGDLNLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQ 419
Query: 297 --CQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
C + + + +L +M + F CL ++ L+
Sbjct: 420 GKCVEGMVEIF-DMLLATSSRFRMMNLQGEEFVCLKSIILL 459
Score = 65 (27.9 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
+Y E +P P +E + +L + + ++A ++PGF DL DQ L + A LE
Sbjct: 332 IYSEYDPSRP-FSEASMMGLLTNLADRELVHMINWAKRVPGFGDLNLHDQVHLLECAWLE 390
Query: 207 L 207
+
Sbjct: 391 I 391
>MGI|MGI:1352467 [details] [associations]
symbol:Esr1 "estrogen receptor 1 (alpha)" species:10090 "Mus
musculus" [GO:0001046 "core promoter sequence-specific DNA binding"
evidence=ISO] [GO:0001547 "antral ovarian follicle growth"
evidence=IMP] [GO:0002064 "epithelial cell development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=ISO]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IDA]
[GO:0005496 "steroid binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0008209 "androgen metabolic process"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008289 "lipid binding" evidence=IEA] [GO:0008584 "male gonad
development" evidence=IMP] [GO:0010629 "negative regulation of gene
expression" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016049 "cell growth" evidence=NAS] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0030284 "estrogen receptor activity"
evidence=ISO] [GO:0030315 "T-tubule" evidence=ISO] [GO:0030518
"intracellular steroid hormone receptor signaling pathway"
evidence=ISO] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IDA] [GO:0031798 "type 1 metabotropic
glutamate receptor binding" evidence=ISO] [GO:0032355 "response to
estradiol stimulus" evidence=ISO] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0034056 "estrogen response element
binding" evidence=ISO] [GO:0038052 "estrogen-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISO] [GO:0042562 "hormone binding"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0043124 "negative
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=ISO] [GO:0043204
"perikaryon" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043523 "regulation of neuron apoptotic process"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044429 "mitochondrial part" evidence=ISO]
[GO:0045429 "positive regulation of nitric oxide biosynthetic
process" evidence=ISO] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=ISO]
[GO:0045839 "negative regulation of mitosis" evidence=NAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IMP] [GO:0048386 "positive
regulation of retinoic acid receptor signaling pathway"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0051000 "positive regulation of nitric-oxide
synthase activity" evidence=ISO] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060011 "Sertoli cell proliferation"
evidence=ISO] [GO:0060065 "uterus development" evidence=IGI]
[GO:0060068 "vagina development" evidence=IGI] [GO:0060523
"prostate epithelial cord elongation" evidence=IMP] [GO:0060527
"prostate epithelial cord arborization involved in prostate
glandular acinus morphogenesis" evidence=IMP] [GO:0060687
"regulation of branching involved in prostate gland morphogenesis"
evidence=IMP] [GO:0060745 "mammary gland branching involved in
pregnancy" evidence=IMP] [GO:0060749 "mammary gland alveolus
development" evidence=IMP] [GO:0060750 "epithelial cell
proliferation involved in mammary gland duct elongation"
evidence=IMP] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=ISO] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IMP] [GO:1901215 "negative regulation of neuron
death" evidence=ISO] InterPro:IPR000536 InterPro:IPR001292
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
Pfam:PF02159 PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00543 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1352467 GO:GO:0005634
GO:GO:0005794 GO:GO:0005737 GO:GO:0048471 GO:GO:0043234
GO:GO:0051091 GO:GO:0042981 GO:GO:0005496 GO:GO:0032355
GO:GO:0046872 GO:GO:0016049 GO:GO:0051000 GO:GO:0043204
GO:GO:0004879 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0070374 GO:GO:0045944 GO:GO:0042562
GO:GO:0043195 GO:GO:0003682 GO:GO:0030315 GO:GO:0008584
GO:GO:0002076 GO:GO:0043124 GO:GO:0008209 GO:GO:0010629
GO:GO:0043433 GO:GO:0045742 GO:GO:0060749 GO:GO:0045429
GO:GO:0045839 GO:GO:0048146 GO:GO:0048386
GeneTree:ENSGT00700000104072 GO:GO:0060750 GO:GO:0060011
GO:GO:0002064 GO:GO:0060068 GO:GO:0001046 GO:GO:0071391
GO:GO:0060687 GO:GO:0001547 HOVERGEN:HBG108344 CTD:2099
eggNOG:NOG320746 HOGENOM:HOG000233468 KO:K08550 OrthoDB:EOG4JM7PP
InterPro:IPR024736 Pfam:PF12743 GO:GO:0044429 GO:GO:0034056
GO:GO:0038052 GO:GO:0060745 GO:GO:0060527 GO:GO:0060523
GO:GO:0060065 EMBL:M38651 EMBL:AK036627 EMBL:AK041525 EMBL:AJ276597
EMBL:AF128221 EMBL:AF128220 IPI:IPI00117980 PIR:A40061
RefSeq:NP_031982.1 UniGene:Mm.463262 UniGene:Mm.489063
UniGene:Mm.9213 ProteinModelPortal:P19785 SMR:P19785 IntAct:P19785
MINT:MINT-2835181 STRING:P19785 GlycoSuiteDB:P19785
PhosphoSite:P19785 PRIDE:P19785 DNASU:13982
Ensembl:ENSMUST00000067086 Ensembl:ENSMUST00000105589
Ensembl:ENSMUST00000105590 GeneID:13982 KEGG:mmu:13982
UCSC:uc007egu.2 InParanoid:P19785 OMA:YRPSSDN BindingDB:P19785
ChEMBL:CHEMBL3065 NextBio:284854 Bgee:P19785 CleanEx:MM_ESR1
Genevestigator:P19785 GermOnline:ENSMUSG00000019768 Uniprot:P19785
Length = 599
Score = 181 (68.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 186 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 245
Query: 100 XXXCLQVGMVKEVVRTDSLKGR 121
C +VGM+K +R D GR
Sbjct: 246 LRKCYEVGMMKGGIRKDRRGGR 267
Score = 127 (49.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 39/161 (24%), Positives = 72/161 (44%)
Query: 177 VIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSV 236
VI+H P S L + A + Y E +P P +E + +L +
Sbjct: 301 VIKHTKKNSPALS-LTADQMVSALLDAEPPMIYSEYDPSRP-FSEASMMGLLTNLADREL 358
Query: 237 DVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQ 296
+ ++A ++PGF DL DQ L + A LE+ ++ L +R+ KL+F ++L++ Q
Sbjct: 359 VHMINWAKRVPGFGDLNLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQ 418
Query: 297 --CQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
C + + + +L +M + F CL ++ L+
Sbjct: 419 GKCVEGMVEIF-DMLLATSSRFRMMNLQGEEFVCLKSIILL 458
Score = 65 (27.9 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
+Y E +P P +E + +L + + ++A ++PGF DL DQ L + A LE
Sbjct: 331 IYSEYDPSRP-FSEASMMGLLTNLADRELVHMINWAKRVPGFGDLNLHDQVHLLECAWLE 389
Query: 207 L 207
+
Sbjct: 390 I 390
>UNIPROTKB|Q13133 [details] [associations]
symbol:NR1H3 "Oxysterols receptor LXR-alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0044255 "cellular lipid metabolic process" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0032810 "sterol response element binding"
evidence=IDA] [GO:0043277 "apoptotic cell clearance" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0032270 "positive regulation of cellular protein
metabolic process" evidence=IMP] [GO:0010875 "positive regulation
of cholesterol efflux" evidence=IDA;IMP] [GO:0045723 "positive
regulation of fatty acid biosynthetic process" evidence=IMP]
[GO:0051006 "positive regulation of lipoprotein lipase activity"
evidence=IMP] [GO:0010745 "negative regulation of macrophage
derived foam cell differentiation" evidence=IC] [GO:0032369
"negative regulation of lipid transport" evidence=IMP] [GO:0048550
"negative regulation of pinocytosis" evidence=IMP] [GO:0032376
"positive regulation of cholesterol transport" evidence=IDA]
[GO:0032570 "response to progesterone stimulus" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0050728
"negative regulation of inflammatory response" evidence=ISS]
[GO:0042632 "cholesterol homeostasis" evidence=ISS] [GO:0055092
"sterol homeostasis" evidence=ISS] [GO:0090341 "negative regulation
of secretion of lysosomal enzymes" evidence=ISS] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IDA] [GO:0034145 "positive regulation of toll-like
receptor 4 signaling pathway" evidence=IDA] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IDA] [GO:0042752
"regulation of circadian rhythm" evidence=TAS] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0060336 "negative regulation of
interferon-gamma-mediated signaling pathway" evidence=NAS]
[GO:0055088 "lipid homeostasis" evidence=ISS] [GO:0090188 "negative
regulation of pancreatic juice secretion" evidence=ISS] [GO:2000189
"positive regulation of cholesterol homeostasis" evidence=IDA]
[GO:0043031 "negative regulation of macrophage activation"
evidence=ISS] [GO:0070328 "triglyceride homeostasis" evidence=ISS]
[GO:0010887 "negative regulation of cholesterol storage"
evidence=IMP] [GO:0010867 "positive regulation of triglyceride
biosynthetic process" evidence=IMP] [GO:0015485 "cholesterol
binding" evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005737 GO:GO:0008286
GO:GO:0045893 GO:GO:0005654 EMBL:CH471064 GO:GO:0046872
GO:GO:0050728 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0045861 GO:GO:0044255 GO:GO:0042752
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0015485 GO:GO:0071222
GO:GO:0042632 GO:GO:0010887 GO:GO:0010745 GO:GO:0010875
GO:GO:0000122 GO:GO:0051006 GO:GO:0044212 GO:GO:0000790
GO:GO:0003713 GO:GO:2000189 GO:GO:0070328 GO:GO:0010867
GO:GO:0032570 GO:GO:0032270 Orphanet:803 GO:GO:0006367
GO:GO:0045723 GO:GO:0043031 GO:GO:0043277 GO:GO:0060336
eggNOG:NOG285805 GO:GO:0010870 GO:GO:0032369 GO:GO:0034145
EMBL:AC018410 PDB:3IPQ PDB:3IPS PDB:3IPU PDBsum:3IPQ PDBsum:3IPS
PDBsum:3IPU PDB:1UHL PDBsum:1UHL GO:GO:0048550 HOVERGEN:HBG108655
InterPro:IPR023257 PRINTS:PR02034 HOGENOM:HOG000220845 CTD:10062
KO:K08536 OMA:CILREEA GO:GO:0032810 GO:GO:0090188 GO:GO:0090341
EMBL:U22662 EMBL:AK290614 EMBL:BC008819 EMBL:BC041172
IPI:IPI00220134 IPI:IPI00301894 IPI:IPI00796145 PIR:I38975
RefSeq:NP_001123573.1 RefSeq:NP_001123574.1 RefSeq:NP_005684.2
UniGene:Hs.438863 ProteinModelPortal:Q13133 SMR:Q13133
IntAct:Q13133 STRING:Q13133 PhosphoSite:Q13133 DMDM:23503089
PaxDb:Q13133 PRIDE:Q13133 DNASU:10062 Ensembl:ENST00000395397
Ensembl:ENST00000405853 Ensembl:ENST00000407404
Ensembl:ENST00000441012 Ensembl:ENST00000467728 GeneID:10062
KEGG:hsa:10062 UCSC:uc001nek.3 UCSC:uc001nen.4
GeneCards:GC11P047269 HGNC:HGNC:7966 HPA:CAB037109 HPA:HPA036443
MIM:602423 neXtProt:NX_Q13133 PharmGKB:PA31751 InParanoid:Q13133
PhylomeDB:Q13133 BindingDB:Q13133 ChEMBL:CHEMBL2808
EvolutionaryTrace:Q13133 GenomeRNAi:10062 NextBio:38029
ArrayExpress:Q13133 Bgee:Q13133 CleanEx:HS_NR1H3
Genevestigator:Q13133 GermOnline:ENSG00000025434 Uniprot:Q13133
Length = 447
Score = 179 (68.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 35/84 (41%), Positives = 49/84 (58%)
Query: 34 PTPPS-PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXX 92
P P ++LC+VCGD A+ HY V +CEGCKGFF+R+V KG+ Y+C + CP+D
Sbjct: 88 PAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGHCPMDTYMR 147
Query: 93 XXXXXXXXXXCLQVGMVKEVVRTD 116
C Q GM +E V ++
Sbjct: 148 RKCQECRLRKCRQAGMREECVLSE 171
Score = 124 (48.7 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 28/116 (24%), Positives = 61/116 (52%)
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ +L + R
Sbjct: 249 ARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNP 308
Query: 280 EDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
+ F ++ ++ +++N I EF ++++ ++++ + FA L A+++
Sbjct: 309 GSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISI 364
Score = 83 (34.3 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPP 218
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ E + P
Sbjct: 249 ARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNP 308
Query: 219 IAE 221
+E
Sbjct: 309 GSE 311
>UNIPROTKB|H0Y4W6 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030284 "estrogen
receptor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001292 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0030284
EMBL:AL356311 EMBL:AL049821 EMBL:AL078582 EMBL:AL590993
HGNC:HGNC:3467 ChiTaRS:ESR1 EMBL:AL035695 ProteinModelPortal:H0Y4W6
Ensembl:ENST00000427531 OMA:VDYVCPA Uniprot:H0Y4W6
Length = 388
Score = 181 (68.8 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 87 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 146
Query: 100 XXXCLQVGMVKEVVRTDSLKGR 121
C +VGM+K +R D GR
Sbjct: 147 LRKCYEVGMMKGGIRKDRRGGR 168
Score = 117 (46.2 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 32/131 (24%), Positives = 63/131 (48%)
Query: 207 LFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASL 266
+ Y E +P P +E + +L + + ++A ++PGF DL DQ L + A L
Sbjct: 231 ILYSEYDPTRP-FSEASMMGLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWL 289
Query: 267 ELFVLRLAYRTRAEDTKLIFCNGVVLEKQQ--CQRSFGDDWLNAILEFCQSLHLMEIDIS 324
E+ ++ L +R+ KL+F ++L++ Q C + + + +L +M +
Sbjct: 290 EILMIGLVWRSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIF-DMLLATSSRFRMMNLQGE 348
Query: 325 AFACLCALTLI 335
F CL ++ L+
Sbjct: 349 EFVCLKSIILL 359
Score = 68 (29.0 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
LY E +P P +E + +L + + ++A ++PGF DL DQ L + A LE
Sbjct: 232 LYSEYDPTRP-FSEASMMGLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLE 290
Query: 207 L 207
+
Sbjct: 291 I 291
>ZFIN|ZDB-GENE-050105-1 [details] [associations]
symbol:nr1d1 "nuclear receptor subfamily 1, group d,
member 1" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004887
"thyroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA;IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-050105-1
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0004887 CTD:9572 HOGENOM:HOG000261691
KO:K03728 HOVERGEN:HBG106790 HSSP:P20393 EMBL:AY391444
IPI:IPI00998148 RefSeq:NP_991292.1 UniGene:Dr.85991
ProteinModelPortal:Q6TNS3 SMR:Q6TNS3 STRING:Q6TNS3 GeneID:494487
KEGG:dre:494487 NextBio:20865711 Bgee:Q6TNS3 Uniprot:Q6TNS3
Length = 637
Score = 173 (66.0 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL ++ C +
Sbjct: 127 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNETCTIMRINRNRCQQCRF 186
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 187 KKCLSVGMSRDAVR 200
Score = 135 (52.6 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 38/154 (24%), Positives = 74/154 (48%)
Query: 184 KIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSL-LTTSVDVIRHF 242
+IPG S+L E + + + + + +P P P++I + +SL T +V + F
Sbjct: 424 RIPG-SELSMEKHKEILLACPMNM-----HPYSDPNKTPQEIWEDFSLSFTPAVREVVEF 477
Query: 243 ADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFG 302
A IPGFS L + DQ L ++ + E+ ++R + ++ + F +G + +S G
Sbjct: 478 AKHIPGFSTLSQNDQVTLLKAGTFEVLMVRFSSLFNVKEKTVTFISGATYSLEAL-KSMG 536
Query: 303 -DDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
D L + +F + L+ +E+ A+ L+
Sbjct: 537 MGDLLGTMFDFSEKLNSLELSAEELGLFTAVVLV 570
Score = 92 (37.4 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 38/140 (27%), Positives = 62/140 (44%)
Query: 152 NPLEPPIAEPEKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYR 210
+P P P++I + +SL T +V + FA IPGFS L + DQ L ++ + E+
Sbjct: 447 HPYSDPNKTPQEIWEDFSLSFTPAVREVVEFAKHIPGFSTLSQNDQVTLLKAGTFEVLMV 506
Query: 211 EPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFA--DKIPGFSDLCKEDQELLFQSASLEL 268
+ L EK F S T S++ ++ D + D ++ L + L L
Sbjct: 507 RFSSL---FNVKEKTVTFISGATYSLEALKSMGMGDLLGTMFDFSEKLNSLELSAEELGL 563
Query: 269 F---VLRLAYRTRAEDTKLI 285
F VL A R+ E+ +
Sbjct: 564 FTAVVLVSADRSGIENVNSV 583
>UNIPROTKB|P06212 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030284 "estrogen receptor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00543
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOVERGEN:HBG108344 CTD:2099
eggNOG:NOG320746 HOGENOM:HOG000233468 KO:K08550 OrthoDB:EOG4JM7PP
GO:GO:0030284 InterPro:IPR024736 Pfam:PF12743 EMBL:X03805
IPI:IPI00594509 PIR:A40914 RefSeq:NP_990514.1 UniGene:Gga.650
ProteinModelPortal:P06212 SMR:P06212 STRING:P06212 GeneID:396099
KEGG:gga:396099 InParanoid:P06212 NextBio:20816157 Uniprot:P06212
Length = 589
Score = 176 (67.0 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 33/81 (40%), Positives = 45/81 (55%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 176 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 235
Query: 100 XXXCLQVGMVKEVVRTDSLKG 120
C +VGM+K +R D G
Sbjct: 236 LRKCYEVGMMKGGIRKDRRGG 256
Score = 130 (50.8 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 42/167 (25%), Positives = 74/167 (44%)
Query: 171 LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYS 230
L TS V++H P S L E A + Y E +P P E + +
Sbjct: 285 LWTSPLVVKHNKKNSPALS-LTAEQMVSALLEAEPPIVYSEYDP-NRPFNEASMMTLLTN 342
Query: 231 LLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGV 290
L + + ++A ++PGF DL DQ L + A LE+ ++ L +R+ KL+F +
Sbjct: 343 LADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNL 402
Query: 291 VLEKQQ--CQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+L++ Q C + + + +L +M + F CL ++ L+
Sbjct: 403 LLDRNQGKCVEGMVEIF-DMLLATAARFRMMNLQGEEFVCLKSIILL 448
>UNIPROTKB|Q29040 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9823 "Sus scrofa"
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0043124 "negative regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=ISS] [GO:0051000
"positive regulation of nitric-oxide synthase activity"
evidence=ISS] [GO:0045429 "positive regulation of nitric oxide
biosynthetic process" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0030284 "estrogen receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001292
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
Pfam:PF02159 PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00543 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005886 GO:GO:0005634
GO:GO:0005794 GO:GO:0051091 GO:GO:0005496 GO:GO:0046872
GO:GO:0051000 GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0043124 GO:GO:0043433 GO:GO:0045429 HOVERGEN:HBG108344
CTD:2099 eggNOG:NOG320746 KO:K08550 OrthoDB:EOG4JM7PP GO:GO:0030284
InterPro:IPR024736 Pfam:PF12743 EMBL:Z37167 PIR:I47140
RefSeq:NP_999385.1 UniGene:Ssc.16144 UniGene:Ssc.82478
ProteinModelPortal:Q29040 SMR:Q29040 STRING:Q29040 GeneID:397435
KEGG:ssc:397435 HOGENOM:HOG000152618 Uniprot:Q29040
Length = 595
Score = 181 (68.8 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 182 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 241
Query: 100 XXXCLQVGMVKEVVRTDSLKGR 121
C +VGM+K +R D GR
Sbjct: 242 LRKCYEVGMMKGGIRKDRRGGR 263
Score = 123 (48.4 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 38/161 (23%), Positives = 73/161 (45%)
Query: 177 VIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSV 236
+I+H P S L + A + Y E +P P ++E + +L +
Sbjct: 297 LIKHTKKNSPVLS-LTADQMISALLEAEPPIIYSEYDPTRP-LSEASMMGLLTNLADREL 354
Query: 237 DVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQ 296
+ ++A ++PGF DL DQ L + A LE+ ++ L +R+ KL+F ++L++ Q
Sbjct: 355 VHMINWAKRVPGFLDLSLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQ 414
Query: 297 --CQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
C + + + +L +M + F CL ++ L+
Sbjct: 415 GKCVEGMVEIF-DMLLATSSRFRMMNLQGEEFVCLKSIILL 454
Score = 68 (29.0 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
+Y E +P P ++E + +L + + ++A ++PGF DL DQ L + A LE
Sbjct: 327 IYSEYDPTRP-LSEASMMGLLTNLADRELVHMINWAKRVPGFLDLSLHDQVHLLECAWLE 385
Query: 207 L 207
+
Sbjct: 386 I 386
>UNIPROTKB|E2QSI1 [details] [associations]
symbol:ESR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0030284 "estrogen
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001292
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
Pfam:PF02159 PIRSF:PIRSF002527 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00543 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0030284
InterPro:IPR024736 Pfam:PF12743 Ensembl:ENSCAFT00000000680
Uniprot:E2QSI1
Length = 495
Score = 181 (68.8 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 80 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 139
Query: 100 XXXCLQVGMVKEVVRTDSLKGR 121
C +VGM+K +R D GR
Sbjct: 140 LRKCYEVGMMKGGIRKDRRGGR 161
Score = 120 (47.3 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 40/169 (23%), Positives = 74/169 (43%)
Query: 169 SLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQF 228
S L S +I+H P S L + A + Y + +P P +E +
Sbjct: 187 SSLWPSPLLIKHTKKNSPALS-LTADQMVSALLEAEPPIIYSDYDPSRP-FSEASMMGLL 244
Query: 229 YSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCN 288
+L + + ++A ++PGF DL DQ L + A LE+ ++ L +R+ KL F
Sbjct: 245 TNLADRELVHMINWAKRVPGFVDLSLHDQVHLLECAWLEILMIGLVWRSMEHPGKLFFAP 304
Query: 289 GVVLEKQQ--CQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
++L++ Q C + + + +L +M + F CL ++ L+
Sbjct: 305 NLLLDRNQGKCVEGIVEIF-DMLLATSSRFRMMNLQGEEFVCLKSIILL 352
Score = 62 (26.9 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
+Y + +P P +E + +L + + ++A ++PGF DL DQ L + A LE
Sbjct: 225 IYSDYDPSRP-FSEASMMGLLTNLADRELVHMINWAKRVPGFVDLSLHDQVHLLECAWLE 283
Query: 207 L 207
+
Sbjct: 284 I 284
>UNIPROTKB|F1MX59 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9913 "Bos taurus"
[GO:0071391 "cellular response to estrogen stimulus" evidence=IEA]
[GO:0060750 "epithelial cell proliferation involved in mammary
gland duct elongation" evidence=IEA] [GO:0060749 "mammary gland
alveolus development" evidence=IEA] [GO:0060745 "mammary gland
branching involved in pregnancy" evidence=IEA] [GO:0060687
"regulation of branching involved in prostate gland morphogenesis"
evidence=IEA] [GO:0060527 "prostate epithelial cord arborization
involved in prostate glandular acinus morphogenesis" evidence=IEA]
[GO:0060523 "prostate epithelial cord elongation" evidence=IEA]
[GO:0060068 "vagina development" evidence=IEA] [GO:0060065 "uterus
development" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0051000 "positive regulation of nitric-oxide
synthase activity" evidence=IEA] [GO:0048386 "positive regulation
of retinoic acid receptor signaling pathway" evidence=IEA]
[GO:0048146 "positive regulation of fibroblast proliferation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045429
"positive regulation of nitric oxide biosynthetic process"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0038052 "estrogen-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0034056 "estrogen response element binding"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008209 "androgen metabolic process" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0001547 "antral ovarian follicle growth"
evidence=IEA] [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00543
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0051091
GO:GO:0042981 GO:GO:0005496 GO:GO:0046872 GO:GO:0051000
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003682 GO:GO:0008584 GO:GO:0043124
GO:GO:0008209 GO:GO:0010629 GO:GO:0043433 GO:GO:0060749
GO:GO:0045429 GO:GO:0048146 GO:GO:0048386
GeneTree:ENSGT00700000104072 GO:GO:0060750 GO:GO:0030520
GO:GO:0002064 GO:GO:0060068 GO:GO:0001046 GO:GO:0071391
GO:GO:0060687 GO:GO:0001547 InterPro:IPR024736 Pfam:PF12743
GO:GO:0034056 GO:GO:0038052 GO:GO:0060745 GO:GO:0060527
GO:GO:0060523 GO:GO:0060065 OMA:YRPSSDN EMBL:DAAA02027184
EMBL:DAAA02027176 EMBL:DAAA02027177 EMBL:DAAA02027178
EMBL:DAAA02027179 EMBL:DAAA02027180 EMBL:DAAA02027181
EMBL:DAAA02027182 EMBL:DAAA02027183 IPI:IPI00906143
Ensembl:ENSBTAT00000009422 Uniprot:F1MX59
Length = 596
Score = 181 (68.8 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 183 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 242
Query: 100 XXXCLQVGMVKEVVRTDSLKGR 121
C +VGM+K +R D GR
Sbjct: 243 LRKCYEVGMMKGGIRKDRRGGR 264
Score = 122 (48.0 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 38/161 (23%), Positives = 72/161 (44%)
Query: 177 VIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSV 236
+I+H P S L + A + Y E +P P +E + +L +
Sbjct: 298 MIKHTKKNSPVLS-LTADQMISALLEAEPPIIYSEYDPTRP-FSEASMMGLLTNLADREL 355
Query: 237 DVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQ 296
+ ++A ++PGF DL DQ L + A LE+ ++ L +R+ KL+F ++L++ Q
Sbjct: 356 VHMINWAKRVPGFVDLALHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQ 415
Query: 297 --CQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
C + + + +L +M + F CL ++ L+
Sbjct: 416 GKCVEGMVEIF-DMLLATSSRFRMMNLQGEEFVCLKSIILL 455
Score = 67 (28.6 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
+Y E +P P +E + +L + + ++A ++PGF DL DQ L + A LE
Sbjct: 328 IYSEYDPTRP-FSEASMMGLLTNLADRELVHMINWAKRVPGFVDLALHDQVHLLECAWLE 386
Query: 207 L 207
+
Sbjct: 387 I 387
>UNIPROTKB|P49884 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9913 "Bos taurus"
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0043124 "negative regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=ISS] [GO:0051000
"positive regulation of nitric-oxide synthase activity"
evidence=ISS] [GO:0045429 "positive regulation of nitric oxide
biosynthetic process" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0030284 "estrogen receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001292
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
Pfam:PF02159 PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00543 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005886 GO:GO:0005634
GO:GO:0005794 GO:GO:0051091 GO:GO:0005496 GO:GO:0046872
GO:GO:0051000 GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0043124 GO:GO:0043433 GO:GO:0045429 HOVERGEN:HBG108344
EMBL:AY538775 EMBL:X66841 EMBL:U64962 IPI:IPI00704572 PIR:S26595
RefSeq:NP_001001443.1 UniGene:Bt.32558 ProteinModelPortal:P49884
SMR:P49884 STRING:P49884 GlycoSuiteDB:P49884 PRIDE:P49884
GeneID:407238 KEGG:bta:407238 CTD:2099 eggNOG:NOG320746
HOGENOM:HOG000233468 InParanoid:P49884 KO:K08550 OrthoDB:EOG4JM7PP
BindingDB:P49884 ChEMBL:CHEMBL2930 NextBio:20818487 GO:GO:0030284
InterPro:IPR024736 Pfam:PF12743 Uniprot:P49884
Length = 596
Score = 181 (68.8 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 183 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 242
Query: 100 XXXCLQVGMVKEVVRTDSLKGR 121
C +VGM+K +R D GR
Sbjct: 243 LRKCYEVGMMKGGIRKDRRGGR 264
Score = 122 (48.0 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 38/161 (23%), Positives = 72/161 (44%)
Query: 177 VIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSV 236
+I+H P S L + A + Y E +P P +E + +L +
Sbjct: 298 MIKHTKKNSPVLS-LTADQMISALLEAEPPIIYSEYDPTRP-FSEASMMGLLTNLADREL 355
Query: 237 DVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQ 296
+ ++A ++PGF DL DQ L + A LE+ ++ L +R+ KL+F ++L++ Q
Sbjct: 356 VHMINWAKRVPGFVDLALHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQ 415
Query: 297 --CQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
C + + + +L +M + F CL ++ L+
Sbjct: 416 GKCVEGMVEIF-DMLLATSSRFRMMNLQGEEFVCLKSIILL 455
Score = 67 (28.6 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
+Y E +P P +E + +L + + ++A ++PGF DL DQ L + A LE
Sbjct: 328 IYSEYDPTRP-FSEASMMGLLTNLADRELVHMINWAKRVPGFVDLALHDQVHLLECAWLE 386
Query: 207 L 207
+
Sbjct: 387 I 387
>ZFIN|ZDB-GENE-990415-244 [details] [associations]
symbol:nr1d2b "nuclear receptor subfamily 1, group
D, member 2b" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-244 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOGENOM:HOG000261691 HOVERGEN:HBG106790 HSSP:P20393
EMBL:AF342942 IPI:IPI00508129 UniGene:Dr.82830
ProteinModelPortal:Q90Z64 STRING:Q90Z64 InParanoid:Q90Z64
ArrayExpress:Q90Z64 Uniprot:Q90Z64
Length = 592
Score = 180 (68.4 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL +++CP+
Sbjct: 99 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNESCPIMRINRNRCQQCRF 158
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 159 KKCLLVGMSRDAVR 172
Score = 123 (48.4 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 218 PIAEPEKI-----QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLR 272
P +P+K ++F T +V + FA +IPGF DL + DQ L ++ + E+ V+R
Sbjct: 403 PYVDPQKSGHSIWEEFSMSFTPAVREVVEFAKRIPGFKDLSQHDQVSLLKAGTFEVLVVR 462
Query: 273 LAYRTRAEDTKLIFCNGVVLEKQQCQRSFG-DDWLNAILEFC---QSLHLMEIDISAFAC 328
++ K+ F +G RS G D LN++ +F Q+L+L E ++S F
Sbjct: 463 FTSLFDVKERKVTFLSGRKYSVDAL-RSLGAGDLLNSMFDFTEKLQALNLSEEEMSLFTA 521
Query: 329 L 329
+
Sbjct: 522 V 522
Score = 86 (35.3 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 38/139 (27%), Positives = 60/139 (43%)
Query: 157 PIAEPEKI-----QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYRE 211
P +P+K ++F T +V + FA +IPGF DL + DQ L ++ + E+
Sbjct: 403 PYVDPQKSGHSIWEEFSMSFTPAVREVVEFAKRIPGFKDLSQHDQVSLLKAGTFEVLVVR 462
Query: 212 PNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFA--DKIPGFSDLCKEDQELLFQSASLELF 269
L + E K+ F S SVD +R D + D ++ Q L + LF
Sbjct: 463 FTSLFD-VKE-RKVT-FLSGRKYSVDALRSLGAGDLLNSMFDFTEKLQALNLSEEEMSLF 519
Query: 270 ---VLRLAYRTRAEDTKLI 285
VL A R+ E+ +
Sbjct: 520 TAVVLVSADRSGLENVNSV 538
>UNIPROTKB|Q53AD2 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9685 "Felis catus"
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=ISS] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0045429 "positive regulation of nitric oxide
biosynthetic process" evidence=ISS] [GO:0051000 "positive
regulation of nitric-oxide synthase activity" evidence=ISS]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00543
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005886 GO:GO:0005634 GO:GO:0005794 GO:GO:0051091
GO:GO:0005496 GO:GO:0046872 GO:GO:0051000 GO:GO:0043565
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0043124 GO:GO:0043433
GO:GO:0045429 HOVERGEN:HBG108344 CTD:2099 GO:GO:0030284
InterPro:IPR024736 Pfam:PF12743 EMBL:AY605260 RefSeq:NP_001019402.1
ProteinModelPortal:Q53AD2 SMR:Q53AD2 GeneID:552888 KEGG:fca:552888
Uniprot:Q53AD2
Length = 595
Score = 181 (68.8 bits), Expect = 5.5e-20, Sum P(2) = 5.5e-20
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 182 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 241
Query: 100 XXXCLQVGMVKEVVRTDSLKGR 121
C +VGM+K +R D GR
Sbjct: 242 LRKCYEVGMMKGGIRKDRRGGR 263
Score = 121 (47.7 bits), Expect = 5.5e-20, Sum P(2) = 5.5e-20
Identities = 37/161 (22%), Positives = 72/161 (44%)
Query: 177 VIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSV 236
+I+H P S L + A + Y + +P P +E + +L +
Sbjct: 297 LIKHTKKNSPALS-LTADQMVSALLEAEPPIIYSDYDPSRP-FSEASMMGLLTNLADREL 354
Query: 237 DVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQ 296
+ ++A ++PGF DL DQ L + A LE+ ++ L +R+ KL+F ++L++ Q
Sbjct: 355 VHMINWAKRVPGFVDLSLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQ 414
Query: 297 --CQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
C + + + +L +M + F CL ++ L+
Sbjct: 415 GKCVEGMVEIF-DMLLATSSRFRMMNLQGEEFVCLKSIILL 454
Score = 62 (26.9 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
+Y + +P P +E + +L + + ++A ++PGF DL DQ L + A LE
Sbjct: 327 IYSDYDPSRP-FSEASMMGLLTNLADRELVHMINWAKRVPGFVDLSLHDQVHLLECAWLE 385
Query: 207 L 207
+
Sbjct: 386 I 386
>UNIPROTKB|C9JU32 [details] [associations]
symbol:ESRRG "Estrogen-related receptor gamma" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOGENOM:HOG000233467 EMBL:AL445650 EMBL:AL512650
EMBL:AC096635 EMBL:AC096634 EMBL:AL391216 EMBL:AL512626
EMBL:AL513312 EMBL:AL603752 HGNC:HGNC:3474 ChiTaRS:ESRRG
IPI:IPI00946882 ProteinModelPortal:C9JU32 SMR:C9JU32 STRING:C9JU32
Ensembl:ENST00000475275 ArrayExpress:C9JU32 Bgee:C9JU32
Uniprot:C9JU32
Length = 354
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 68/187 (36%), Positives = 85/187 (45%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 101 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 160
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYREPNPLEPP- 157
CL+VGM+KE VR D ++G GR L+ + N +
Sbjct: 161 RFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHL 218
Query: 158 -IAEPEKIQQF---------YSLLTTSVD-------VIRHFADKIPGFSDLCKEDQELLF 200
+AEPEKI LTT D VI +A IPGFS L DQ L
Sbjct: 219 LVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 278
Query: 201 QSASLEL 207
QSA +E+
Sbjct: 279 QSAWMEI 285
Score = 142 (55.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 203 ASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQ 262
A E Y P+P P ++ + + L + VI +A IPGFS L DQ L Q
Sbjct: 221 AEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQ 279
Query: 263 SASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEID 322
SA +E+ +L + YR+ + + +L++ + ++++ Q + + D NAIL+ + M+++
Sbjct: 280 SAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLE 339
Query: 323 ISAFACLCALTL 334
F L A+ L
Sbjct: 340 KEEFVTLKAIAL 351
>UNIPROTKB|F6V0I8 [details] [associations]
symbol:ESR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0030284 "estrogen
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001292
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
Pfam:PF02159 PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00543 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104072 CTD:2099 KO:K08550 GO:GO:0030284
InterPro:IPR024736 Pfam:PF12743 OMA:YRPSSDN
Ensembl:ENSCAFT00000000680 EMBL:AAEX03000277 EMBL:AAEX03000275
EMBL:AAEX03000276 RefSeq:XP_533454.2 GeneID:403640 KEGG:cfa:403640
Uniprot:F6V0I8
Length = 596
Score = 181 (68.8 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 183 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 242
Query: 100 XXXCLQVGMVKEVVRTDSLKGR 121
C +VGM+K +R D GR
Sbjct: 243 LRKCYEVGMMKGGIRKDRRGGR 264
Score = 120 (47.3 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
Identities = 40/169 (23%), Positives = 74/169 (43%)
Query: 169 SLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQF 228
S L S +I+H P S L + A + Y + +P P +E +
Sbjct: 290 SSLWPSPLLIKHTKKNSPALS-LTADQMVSALLEAEPPIIYSDYDPSRP-FSEASMMGLL 347
Query: 229 YSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCN 288
+L + + ++A ++PGF DL DQ L + A LE+ ++ L +R+ KL F
Sbjct: 348 TNLADRELVHMINWAKRVPGFVDLSLHDQVHLLECAWLEILMIGLVWRSMEHPGKLFFAP 407
Query: 289 GVVLEKQQ--CQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
++L++ Q C + + + +L +M + F CL ++ L+
Sbjct: 408 NLLLDRNQGKCVEGIVEIF-DMLLATSSRFRMMNLQGEEFVCLKSIILL 455
Score = 62 (26.9 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
+Y + +P P +E + +L + + ++A ++PGF DL DQ L + A LE
Sbjct: 328 IYSDYDPSRP-FSEASMMGLLTNLADRELVHMINWAKRVPGFVDLSLHDQVHLLECAWLE 386
Query: 207 L 207
+
Sbjct: 387 I 387
>ZFIN|ZDB-GENE-020806-5 [details] [associations]
symbol:esr1 "estrogen receptor 1" species:7955 "Danio
rerio" [GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0030284 "estrogen receptor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009410 "response to xenobiotic stimulus"
evidence=IDA] [GO:0032355 "response to estradiol stimulus"
evidence=IDA] [GO:0042221 "response to chemical stimulus"
evidence=IDA] [GO:0043627 "response to estrogen stimulus"
evidence=IDA] [GO:0048920 "posterior lateral line neuromast
primordium migration" evidence=IGI;IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001292 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105 Pfam:PF02159
PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-020806-5 GO:GO:0005634 GO:GO:0005496 GO:GO:0032355
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0009410 HOVERGEN:HBG108344 HOGENOM:HOG000233468 GO:GO:0030284
GO:GO:0048920 EMBL:EU079275 IPI:IPI00911410 UniGene:Dr.79999
STRING:B4XRZ3 ArrayExpress:B4XRZ3 Uniprot:B4XRZ3
Length = 621
Score = 179 (68.1 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 33/77 (42%), Positives = 44/77 (57%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + YVC A C +D
Sbjct: 201 TRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYVCPATNQCTIDRNRRKSCQACR 260
Query: 100 XXXCLQVGMVKEVVRTD 116
C +VGM+K +R D
Sbjct: 261 LRKCYEVGMMKGGIRKD 277
Score = 123 (48.4 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 34/112 (30%), Positives = 58/112 (51%)
Query: 230 SLLTTSVDV-IRH---FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLI 285
SLLT D + H +A K+PGF DL DQ L +S+ LE+ ++ L +R+ KLI
Sbjct: 364 SLLTNMADKELVHMIAWAKKVPGFQDLSLHDQVQLLESSWLEVLMIGLIWRSIHSPGKLI 423
Query: 286 FCNGVVLEKQQ--CQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
F ++L++ + C + + + +L +++ + F CL A+ LI
Sbjct: 424 FAQDLILDRSEGECVEGMAEIF-DMLLATVARFRSLKLKLEEFVCLKAIILI 474
Score = 68 (29.0 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 169 SLLTTSVDV-IRH---FADKIPGFSDLCKEDQELLFQSASLEL 207
SLLT D + H +A K+PGF DL DQ L +S+ LE+
Sbjct: 364 SLLTNMADKELVHMIAWAKKVPGFQDLSLHDQVQLLESSWLEV 406
>UNIPROTKB|O18473 [details] [associations]
symbol:EcR "Ecdysone receptor" species:7102 "Heliothis
virescens" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003069 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01283 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0004884 EMBL:Y09009 PDB:1R1K PDB:1R20
PDB:2R40 PDBsum:1R1K PDBsum:1R20 PDBsum:2R40
ProteinModelPortal:O18473 SMR:O18473 IntAct:O18473
EvolutionaryTrace:O18473 Uniprot:O18473
Length = 576
Score = 180 (68.4 bits), Expect = 8.8e-20, Sum P(2) = 8.8e-20
Identities = 35/80 (43%), Positives = 42/80 (52%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXX 93
P P +LC VCGD A+ HY TCEGCKGFF+R+V K + Y+C AC +D
Sbjct: 154 PAPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKNAVYICKFGHACEMDIYMRR 213
Query: 94 XXXXXXXXXCLQVGMVKEVV 113
CL VGM E V
Sbjct: 214 KCQECRLKKCLAVGMRPECV 233
Score = 120 (47.3 bits), Expect = 8.8e-20, Sum P(2) = 8.8e-20
Identities = 28/109 (25%), Positives = 56/109 (51%)
Query: 226 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLI 285
+Q + +V +I FA +PGF+ + + DQ L ++ S E+ +LR+A R A ++
Sbjct: 355 RQITEMTILTVQLIVEFAKGLPGFAKISQSDQITLLKACSSEVMMLRVARRYDAATDSVL 414
Query: 286 FCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
F N + +++ + +L FC+ ++ M +D +A L A+ +
Sbjct: 415 FANNQAYTRDNYRKAGMAYVIEDLLHFCRCMYSMMMDNVHYALLTAIVI 463
Score = 61 (26.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 165 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
+Q + +V +I FA +PGF+ + + DQ L ++ S E+
Sbjct: 355 RQITEMTILTVQLIVEFAKGLPGFAKISQSDQITLLKACSSEV 397
>ZFIN|ZDB-GENE-040616-3 [details] [associations]
symbol:esrrd "estrogen-related receptor delta"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040616-3 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00700000104391 EMBL:CABZ01076181
EMBL:CABZ01076182 IPI:IPI00898096 Ensembl:ENSDART00000125432
Bgee:F1Q8K8 Uniprot:F1Q8K8
Length = 431
Score = 192 (72.6 bits), Expect = 8.8e-20, Sum P(2) = 8.8e-20
Identities = 44/118 (37%), Positives = 57/118 (48%)
Query: 7 SSSESPKLRHXXXXXXXXXXXGCDTSRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGF 66
SSS +P L H D P P +LC VCGD A+ HYGV +CE CK F
Sbjct: 65 SSSSAPVLFHPAGHPEHALIS--DYIPSLNPGPKRLCLVCGDFASGYHYGVASCEACKAF 122
Query: 67 FKRTVQKGS-KYVCLADKACPVDXXXXXXXXXXXXXXCLQVGMVKEV-VRTDSLKGRR 122
FKRT+Q G+ +Y C C + CL+ GM++E VR D ++G R
Sbjct: 123 FKRTIQAGNIEYSCPVVNDCEITKRRRKSCQACRFQKCLRAGMMREAGVRMDRVRGGR 180
Score = 99 (39.9 bits), Expect = 8.8e-20, Sum P(2) = 8.8e-20
Identities = 38/135 (28%), Positives = 57/135 (42%)
Query: 206 ELFYREPNPLE--PPIAEPEK----IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQEL 259
EL E PL P + P+ + LL + V+ +A IPGF L DQ
Sbjct: 213 ELLLCEVTPLRAAPDSSTPDSDLKTLMTLCDLLNRELLVMIGWAKHIPGFCALSLLDQMA 272
Query: 260 LFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLM 319
L QS +E +L +A+R++A +L F + L + Q Q + D A+ M
Sbjct: 273 LLQSGWMETLLLNVAWRSQALAEELQFAENLRLNESQSQAAGLHDLYTALRHLTCRYQQM 332
Query: 320 EIDISAFACLCALTL 334
+ F L A+ L
Sbjct: 333 SLKQEEFIILKAMAL 347
Score = 57 (25.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 144 ITALYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSA 203
+T L P+ P ++ + + LL + V+ +A IPGF L DQ L QS
Sbjct: 219 VTPLRAAPDSSTPD-SDLKTLMTLCDLLNRELLVMIGWAKHIPGFCALSLLDQMALLQSG 277
Query: 204 SLE 206
+E
Sbjct: 278 WME 280
>UNIPROTKB|Q14995 [details] [associations]
symbol:NR1D2 "Nuclear receptor subfamily 1 group D member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005654 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0006367 eggNOG:NOG324222 HOGENOM:HOG000261691
HOVERGEN:HBG106790 EMBL:D16815 EMBL:AK313464 EMBL:AC124914
EMBL:BC045613 EMBL:L31785 IPI:IPI00788022 PIR:A57057
RefSeq:NP_005117.3 UniGene:Hs.37288 PDB:2V0V PDB:2V7C PDB:3CQV
PDBsum:2V0V PDBsum:2V7C PDBsum:3CQV ProteinModelPortal:Q14995
SMR:Q14995 STRING:Q14995 PhosphoSite:Q14995 DMDM:215274122
PRIDE:Q14995 DNASU:9975 Ensembl:ENST00000312521
Ensembl:ENST00000396676 GeneID:9975 KEGG:hsa:9975 CTD:9975
GeneCards:GC03P023961 HGNC:HGNC:7963 MIM:602304 neXtProt:NX_Q14995
PharmGKB:PA31749 InParanoid:Q14995 KO:K08531 OMA:MMNSQFS
OrthoDB:EOG4V170J BindingDB:Q14995 ChEMBL:CHEMBL1961784
EvolutionaryTrace:Q14995 GenomeRNAi:9975 NextBio:37672
ArrayExpress:Q14995 Bgee:Q14995 CleanEx:HS_NR1D2
Genevestigator:Q14995 GermOnline:ENSG00000174738 Uniprot:Q14995
Length = 579
Score = 171 (65.3 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL ++ C +
Sbjct: 102 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRF 161
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 162 KKCLSVGMSRDAVR 175
Score = 131 (51.2 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 38/157 (24%), Positives = 72/157 (45%)
Query: 183 DKIP--GFSDLCKEDQELLFQSASLELFYR-EPNPLEPPIAEPEKIQQFYSL-LTTSVDV 238
D++P GFS ++ L + L +P P +I + +S+ T +V
Sbjct: 356 DRVPIDGFSQNENKNSYLCNTGGRMHLVCPLSKSPYVDPHKSGHEIWEEFSMSFTPAVKE 415
Query: 239 IRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQ 298
+ FA +IPGF DL + DQ L ++ + E+ ++R A A++ + F +G
Sbjct: 416 VVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLH 475
Query: 299 RSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
D LN++ EF + L+ +++ + A+ L+
Sbjct: 476 SMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVVLV 512
Score = 79 (32.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 143 LITALYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQS 202
L+ L + P ++P + E ++F T +V + FA +IPGF DL + DQ L ++
Sbjct: 382 LVCPLSKSPY-VDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKA 440
Query: 203 ASLEL 207
+ E+
Sbjct: 441 GTFEV 445
>ZFIN|ZDB-GENE-080403-5 [details] [associations]
symbol:nr1d4a "nuclear receptor subfamily 1, group D,
member 4a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR001728 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-080403-5 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887 eggNOG:NOG324222
GeneTree:ENSGT00700000104109 HOGENOM:HOG000261691
HOVERGEN:HBG106790 EMBL:BX465853 IPI:IPI00512239 RefSeq:XP_691607.3
UniGene:Dr.103114 Ensembl:ENSDART00000103169 GeneID:563150
KEGG:dre:563150 CTD:563150 OrthoDB:EOG41NTM7 NextBio:20884758
Uniprot:B8A510
Length = 570
Score = 181 (68.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 54/180 (30%), Positives = 80/180 (44%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKY-VCLADKACPVDXXXXXXXXXXXX 100
LC VCGDIA+ HYGV CEGCKGFF+R++Q+ Y +C+ ++ C +
Sbjct: 113 LCKVCGDIASGFHYGVHACEGCKGFFRRSIQQNINYKMCVKNENCLIMRMNRNRCQHCRF 172
Query: 101 XXCLQVGMVKEVVRTDSL-KGRRGRLXXXXXXXXXXXXXXXXXLITALYREPNPLEPPIA 159
CL VGM ++ VR + K + RL + T+ EP P PI
Sbjct: 173 KKCLSVGMSRDAVRFGRIPKREKQRLLDEMQSYMNSLNESSMGMETSPQHEPPP--SPIE 230
Query: 160 EPEKIQQFYSLLTTSVDVIRHFAD---KIPGFSDLCKEDQELLFQ-SASLELFYREPNPL 215
K + +L D+ + D K G +++ + +Q S S + Y NPL
Sbjct: 231 NQSK-EAIGALSRAYQDIFTNTQDHLNKRAGNNNISRSSS---YQNSPSQDSNYPHANPL 286
Score = 117 (46.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 214 PLEPPIAEPEKI-QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLR 272
P+ P +++ + F T +V + FA IPGF +LC+ DQ +L ++ + ++ ++R
Sbjct: 381 PVSAPGVSSQQVWESFSQCFTPAVREVVEFAKGIPGFQELCQHDQVMLLKAGTFQVLMVR 440
Query: 273 LAYRTRAEDTKLIFCNGVVLEKQQCQRSFG-DDWLNAILEFCQSLHLMEIDISAFACLCA 331
++ + F NG R G L+A+ EF L + ++ A A
Sbjct: 441 FCSLFNHKERSVTFLNGQTYPLGTL-RGLGMGSLLDAMFEFSSKLSSLGLESDEMALFMA 499
Query: 332 LTLI 335
+ L+
Sbjct: 500 VVLV 503
>UNIPROTKB|P03372 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001547 "antral ovarian follicle growth"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008209 "androgen metabolic process" evidence=IEA] [GO:0008584
"male gonad development" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0048146 "positive regulation
of fibroblast proliferation" evidence=IEA] [GO:0060065 "uterus
development" evidence=IEA] [GO:0060068 "vagina development"
evidence=IEA] [GO:0060523 "prostate epithelial cord elongation"
evidence=IEA] [GO:0060527 "prostate epithelial cord arborization
involved in prostate glandular acinus morphogenesis" evidence=IEA]
[GO:0060687 "regulation of branching involved in prostate gland
morphogenesis" evidence=IEA] [GO:0060745 "mammary gland branching
involved in pregnancy" evidence=IEA] [GO:0060749 "mammary gland
alveolus development" evidence=IEA] [GO:0060750 "epithelial cell
proliferation involved in mammary gland duct elongation"
evidence=IEA] [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=NAS] [GO:0016020 "membrane"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030284 "estrogen receptor activity"
evidence=NAS] [GO:0030235 "nitric-oxide synthase regulator
activity" evidence=NAS] [GO:0034056 "estrogen response element
binding" evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0045429 "positive regulation of nitric oxide biosynthetic
process" evidence=IDA] [GO:0051000 "positive regulation of
nitric-oxide synthase activity" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IDA] [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IDA] [GO:0010629 "negative
regulation of gene expression" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0043627 "response to estrogen stimulus"
evidence=IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0038052 "estrogen-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IGI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0048386 "positive regulation of
retinoic acid receptor signaling pathway" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0032355 "response to estradiol stimulus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001292
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
Pfam:PF02159 PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00543 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0016021 GO:GO:0005886
GO:GO:0005794 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
Pathway_Interaction_DB:telomerasepathway GO:GO:0005654
GO:GO:0051091 GO:GO:0042981 GO:GO:0005496 GO:GO:0032355
GO:GO:0046872 Pathway_Interaction_DB:p38alphabetadownstreampathway
EMBL:CH471051 GO:GO:0051000 GO:GO:0043204 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
Pathway_Interaction_DB:hnf3apathway GO:GO:0070374 GO:GO:0045944
GO:GO:0042562 GO:GO:0043195 GO:GO:0003682 GO:GO:0030315
GO:GO:0002076 DrugBank:DB00506 GO:GO:0043124 GO:GO:0008209
GO:GO:0010629 DrugBank:DB00481 GO:GO:0043433 GO:GO:0045742
GO:GO:0060749 GO:GO:0045429 GO:GO:0048146
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0030235
GO:GO:0048386 DrugBank:DB00655 DrugBank:DB00858 DrugBank:DB01185
GO:GO:0006367 GO:GO:0060750 GO:GO:0016585
Pathway_Interaction_DB:foxm1pathway GO:GO:0060011 GO:GO:0002064
GO:GO:0060068 GO:GO:0001046 DrugBank:DB01065 GO:GO:0071391
GO:GO:0060687 PDB:2LLO PDB:2LLQ PDBsum:2LLO PDBsum:2LLQ
DrugBank:DB01406 GO:GO:0001547 DrugBank:DB00286 DrugBank:DB00255
DrugBank:DB00603 DrugBank:DB00396 DrugBank:DB01006 DrugBank:DB00783
DrugBank:DB00977 DrugBank:DB00304 DrugBank:DB00675 DrugBank:DB01395
DrugBank:DB00294 DrugBank:DB00947 DrugBank:DB00539 DrugBank:DB04573
DrugBank:DB01183 HOVERGEN:HBG108344 CTD:2099 eggNOG:NOG320746
KO:K08550 OrthoDB:EOG4JM7PP InterPro:IPR024736 Pfam:PF12743
EMBL:X03635 EMBL:M12674 EMBL:U47678 EMBL:AY425004 EMBL:BX640939
EMBL:AL356311 EMBL:AL049821 EMBL:AL078582 EMBL:AL590993
EMBL:BC128573 EMBL:BC128574 EMBL:AH008151 EMBL:X73067 EMBL:Z75126
IPI:IPI00218352 IPI:IPI00294982 IPI:IPI00914643 IPI:IPI01018719
PIR:S64737 RefSeq:NP_000116.2 RefSeq:NP_001116212.1
RefSeq:NP_001116213.1 RefSeq:NP_001116214.1 UniGene:Hs.208124
PDB:1A52 PDB:1AKF PDB:1ERE PDB:1ERR PDB:1G50 PDB:1GWQ PDB:1GWR
PDB:1HCP PDB:1HCQ PDB:1L2I PDB:1PCG PDB:1QKT PDB:1QKU PDB:1R5K
PDB:1SJ0 PDB:1UOM PDB:1X7E PDB:1X7R PDB:1XP1 PDB:1XP6 PDB:1XP9
PDB:1XPC PDB:1XQC PDB:1YIM PDB:1YIN PDB:1ZKY PDB:2AYR PDB:2B1V
PDB:2B1Z PDB:2B23 PDB:2BJ4 PDB:2FAI PDB:2G44 PDB:2G5O PDB:2I0J
PDB:2IOG PDB:2IOK PDB:2JF9 PDB:2JFA PDB:2OCF PDB:2OUZ PDB:2P15
PDB:2POG PDB:2Q6J PDB:2Q70 PDB:2QA6 PDB:2QA8 PDB:2QAB PDB:2QE4
PDB:2QGT PDB:2QGW PDB:2QH6 PDB:2QR9 PDB:2QSE PDB:2QXM PDB:2QXS
PDB:2QZO PDB:2R6W PDB:2R6Y PDB:2YAT PDB:2YJA PDB:3CBM PDB:3CBO
PDB:3CBP PDB:3DT3 PDB:3ERD PDB:3ERT PDB:3HLV PDB:3HM1 PDB:3L03
PDB:3OS8 PDB:3OS9 PDB:3OSA PDB:3Q95 PDB:3Q97 PDB:3UU7 PDB:3UUA
PDB:3UUC PDB:3UUD PDB:4AA6 PDB:4DMA PDBsum:1A52 PDBsum:1AKF
PDBsum:1ERE PDBsum:1ERR PDBsum:1G50 PDBsum:1GWQ PDBsum:1GWR
PDBsum:1HCP PDBsum:1HCQ PDBsum:1L2I PDBsum:1PCG PDBsum:1QKT
PDBsum:1QKU PDBsum:1R5K PDBsum:1SJ0 PDBsum:1UOM PDBsum:1X7E
PDBsum:1X7R PDBsum:1XP1 PDBsum:1XP6 PDBsum:1XP9 PDBsum:1XPC
PDBsum:1XQC PDBsum:1YIM PDBsum:1YIN PDBsum:1ZKY PDBsum:2AYR
PDBsum:2B1V PDBsum:2B1Z PDBsum:2B23 PDBsum:2BJ4 PDBsum:2FAI
PDBsum:2G44 PDBsum:2G5O PDBsum:2I0J PDBsum:2IOG PDBsum:2IOK
PDBsum:2JF9 PDBsum:2JFA PDBsum:2OCF PDBsum:2OUZ PDBsum:2P15
PDBsum:2POG PDBsum:2Q6J PDBsum:2Q70 PDBsum:2QA6 PDBsum:2QA8
PDBsum:2QAB PDBsum:2QE4 PDBsum:2QGT PDBsum:2QGW PDBsum:2QH6
PDBsum:2QR9 PDBsum:2QSE PDBsum:2QXM PDBsum:2QXS PDBsum:2QZO
PDBsum:2R6W PDBsum:2R6Y PDBsum:2YAT PDBsum:2YJA PDBsum:3CBM
PDBsum:3CBO PDBsum:3CBP PDBsum:3DT3 PDBsum:3ERD PDBsum:3ERT
PDBsum:3HLV PDBsum:3HM1 PDBsum:3L03 PDBsum:3OS8 PDBsum:3OS9
PDBsum:3OSA PDBsum:3Q95 PDBsum:3Q97 PDBsum:3UU7 PDBsum:3UUA
PDBsum:3UUC PDBsum:3UUD PDBsum:4AA6 PDBsum:4DMA DisProt:DP00074
ProteinModelPortal:P03372 SMR:P03372 DIP:DIP-5965N IntAct:P03372
MINT:MINT-129047 STRING:P03372 GlycoSuiteDB:P03372
PhosphoSite:P03372 DMDM:544257 PaxDb:P03372 PRIDE:P03372 DNASU:2099
Ensembl:ENST00000206249 Ensembl:ENST00000338799
Ensembl:ENST00000440973 Ensembl:ENST00000443427
Ensembl:ENST00000456483 GeneID:2099 KEGG:hsa:2099 UCSC:uc003qom.4
GeneCards:GC06P151980 HGNC:HGNC:3467 HPA:CAB000037 HPA:HPA000449
HPA:HPA000450 MIM:133430 neXtProt:NX_P03372 Orphanet:785
PharmGKB:PA156 InParanoid:P03372 PhylomeDB:P03372 BindingDB:P03372
ChEMBL:CHEMBL206 ChiTaRS:ESR1 DrugBank:DB00269 DrugBank:DB00882
DrugBank:DB00890 DrugBank:DB01196 DrugBank:DB00823 DrugBank:DB00367
DrugBank:DB00351 DrugBank:DB01357 DrugBank:DB00957 DrugBank:DB04575
EvolutionaryTrace:P03372 GenomeRNAi:2099 NextBio:8491
ArrayExpress:P03372 Bgee:P03372 CleanEx:HS_ESR1
Genevestigator:P03372 GermOnline:ENSG00000091831 GO:GO:0044429
GO:GO:0034056 GO:GO:0038052 GO:GO:0060745 GO:GO:0060527
GO:GO:0060523 GO:GO:0060065 Uniprot:P03372
Length = 595
Score = 181 (68.8 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 182 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 241
Query: 100 XXXCLQVGMVKEVVRTDSLKGR 121
C +VGM+K +R D GR
Sbjct: 242 LRKCYEVGMMKGGIRKDRRGGR 263
Score = 117 (46.2 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 32/131 (24%), Positives = 63/131 (48%)
Query: 207 LFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASL 266
+ Y E +P P +E + +L + + ++A ++PGF DL DQ L + A L
Sbjct: 326 ILYSEYDPTRP-FSEASMMGLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWL 384
Query: 267 ELFVLRLAYRTRAEDTKLIFCNGVVLEKQQ--CQRSFGDDWLNAILEFCQSLHLMEIDIS 324
E+ ++ L +R+ KL+F ++L++ Q C + + + +L +M +
Sbjct: 385 EILMIGLVWRSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIF-DMLLATSSRFRMMNLQGE 443
Query: 325 AFACLCALTLI 335
F CL ++ L+
Sbjct: 444 EFVCLKSIILL 454
Score = 68 (29.0 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
LY E +P P +E + +L + + ++A ++PGF DL DQ L + A LE
Sbjct: 327 LYSEYDPTRP-FSEASMMGLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLE 385
Query: 207 L 207
+
Sbjct: 386 I 386
>UNIPROTKB|I3LL46 [details] [associations]
symbol:NR1D2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104109 OMA:MMNSQFS EMBL:FP085569
Ensembl:ENSSSCT00000025072 Uniprot:I3LL46
Length = 573
Score = 171 (65.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL ++ C +
Sbjct: 97 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRF 156
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 157 KKCLSVGMSRDAVR 170
Score = 128 (50.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 37/153 (24%), Positives = 69/153 (45%)
Query: 185 IPGFSDLCKEDQELLFQSASLELFY-REPNPLEPPIAEPEKIQQFYSL-LTTSVDVIRHF 242
I GFS ++ L + L +P P +I + +S+ T +V + F
Sbjct: 354 IDGFSQNENKNSYLCNTGGRMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEF 413
Query: 243 ADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFG 302
A +IPGF DL + DQ L ++ + E+ ++R A A++ + F +G
Sbjct: 414 AKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGA 473
Query: 303 DDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
D LN++ EF + L+ +++ + A+ L+
Sbjct: 474 GDLLNSMFEFSEKLNALQLSDEEMSLFTAVVLV 506
Score = 77 (32.2 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 143 LITALYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQS 202
L+ + + P ++P + E ++F T +V + FA +IPGF DL + DQ L ++
Sbjct: 376 LVCPMSKSPY-VDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKA 434
Query: 203 ASLEL 207
+ E+
Sbjct: 435 GTFEV 439
>UNIPROTKB|Q9TV98 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9796 "Equus
caballus" [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0045429 "positive regulation of nitric
oxide biosynthetic process" evidence=ISS] [GO:0051000 "positive
regulation of nitric-oxide synthase activity" evidence=ISS]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00543
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005886 GO:GO:0005634 GO:GO:0005794 GO:GO:0051091
GO:GO:0005496 GO:GO:0046872 GO:GO:0051000 GO:GO:0043565
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0043124 GO:GO:0043433
GO:GO:0045429 HOVERGEN:HBG108344 CTD:2099 eggNOG:NOG320746
HOGENOM:HOG000233468 KO:K08550 OrthoDB:EOG4JM7PP GO:GO:0030284
InterPro:IPR024736 Pfam:PF12743 EMBL:AF124093 RefSeq:NP_001075241.1
UniGene:Eca.13034 ProteinModelPortal:Q9TV98 SMR:Q9TV98
STRING:Q9TV98 GeneID:791249 KEGG:ecb:791249 InParanoid:Q9TV98
Uniprot:Q9TV98
Length = 594
Score = 181 (68.8 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 182 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 241
Query: 100 XXXCLQVGMVKEVVRTDSLKGR 121
C +VGM+K +R D GR
Sbjct: 242 LRKCYEVGMMKGGIRKDRRGGR 263
Score = 116 (45.9 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 39/161 (24%), Positives = 71/161 (44%)
Query: 177 VIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSV 236
+I+H KI L E A + Y E + P E + +L +
Sbjct: 297 LIKH-TKKISPVLSLTAEQMISALLDAEPPVLYSEYDATRP-FNEASMMGLLTNLADREL 354
Query: 237 DVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQ 296
+ ++A ++PGF DL DQ L + A LE+ ++ L +R+ KL+F ++L++ Q
Sbjct: 355 VHMINWAKRVPGFVDLSLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQ 414
Query: 297 --CQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
C + + + +L L +M + F CL ++ L+
Sbjct: 415 GKCVEGMVEIF-DMLLATSSRLRMMNLQGEEFVCLKSIILL 454
>UNIPROTKB|E2QXI5 [details] [associations]
symbol:NR1D2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104109 CTD:9975 KO:K08531 OMA:MMNSQFS
EMBL:AAEX03013558 RefSeq:XP_542763.2 Ensembl:ENSCAFT00000009281
GeneID:485643 KEGG:cfa:485643 NextBio:20859594 Uniprot:E2QXI5
Length = 576
Score = 171 (65.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL ++ C +
Sbjct: 102 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRF 161
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 162 KKCLSVGMSRDAVR 175
Score = 128 (50.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 37/153 (24%), Positives = 69/153 (45%)
Query: 185 IPGFSDLCKEDQELLFQSASLELFY-REPNPLEPPIAEPEKIQQFYSL-LTTSVDVIRHF 242
I GFS ++ L + L +P P +I + +S+ T +V + F
Sbjct: 357 IDGFSQNENKNNYLCNTGGRMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEF 416
Query: 243 ADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFG 302
A +IPGF DL + DQ L ++ + E+ ++R A A++ + F +G
Sbjct: 417 AKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGA 476
Query: 303 DDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
D LN++ EF + L+ +++ + A+ L+
Sbjct: 477 GDLLNSMFEFSEKLNALQLSDEEMSLFTAVVLV 509
Score = 77 (32.2 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 143 LITALYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQS 202
L+ + + P ++P + E ++F T +V + FA +IPGF DL + DQ L ++
Sbjct: 379 LVCPMSKSPY-VDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKA 437
Query: 203 ASLEL 207
+ E+
Sbjct: 438 GTFEV 442
>UNIPROTKB|J9NWD9 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GeneTree:ENSGT00700000104391
CTD:2104 KO:K08554 GO:GO:0003708 EMBL:AAEX03018324 GeneID:478961
KEGG:cfa:478961 RefSeq:XP_003434352.1 ProteinModelPortal:J9NWD9
Ensembl:ENSCAFT00000046515 Uniprot:J9NWD9
Length = 435
Score = 237 (88.5 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 68/187 (36%), Positives = 85/187 (45%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 101 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 160
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYREPNPLEPP- 157
CL+VGM+KE VR D ++G GR L+ + N +
Sbjct: 161 RFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHL 218
Query: 158 -IAEPEKIQQF---------YSLLTTSVD-------VIRHFADKIPGFSDLCKEDQELLF 200
+AEPEKI LTT D VI +A IPGFS L DQ L
Sbjct: 219 LVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 278
Query: 201 QSASLEL 207
QSA +E+
Sbjct: 279 QSAWMEI 285
Score = 142 (55.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 203 ASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQ 262
A E Y P+P P ++ + + L + VI +A IPGFS L DQ L Q
Sbjct: 221 AEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQ 279
Query: 263 SASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEID 322
SA +E+ +L + YR+ + + +L++ + ++++ Q + + D NAIL+ + M+++
Sbjct: 280 SAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLE 339
Query: 323 ISAFACLCALTL 334
F L A+ L
Sbjct: 340 KEEFVTLKAIAL 351
>UNIPROTKB|Q5UKY7 [details] [associations]
symbol:ESRRG "Nuclear receptor subfamily 3 group B member
3" species:9031 "Gallus gallus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005496
"steroid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344
GeneTree:ENSGT00700000104391 CTD:2104 KO:K08554 EMBL:AADN02012104
EMBL:AADN02012105 EMBL:AADN02012106 EMBL:AADN02012107 EMBL:AY702438
IPI:IPI00601951 RefSeq:NP_001007082.1 UniGene:Gga.11217 SMR:Q5UKY7
STRING:Q5UKY7 Ensembl:ENSGALT00000015707 GeneID:421357
KEGG:gga:421357 InParanoid:Q5UKY7 NextBio:20824134 Uniprot:Q5UKY7
Length = 435
Score = 237 (88.5 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 68/187 (36%), Positives = 85/187 (45%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 101 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 160
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYREPNPLEPP- 157
CL+VGM+KE VR D ++G GR L+ + N +
Sbjct: 161 RFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHL 218
Query: 158 -IAEPEKIQQF---------YSLLTTSVD-------VIRHFADKIPGFSDLCKEDQELLF 200
+AEPEKI LTT D VI +A IPGFS L DQ L
Sbjct: 219 LVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 278
Query: 201 QSASLEL 207
QSA +E+
Sbjct: 279 QSAWMEI 285
Score = 141 (54.7 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 38/132 (28%), Positives = 67/132 (50%)
Query: 203 ASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQ 262
A E Y P+P P ++ + + L + VI +A IPGFS L DQ L Q
Sbjct: 221 AEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQ 279
Query: 263 SASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEID 322
SA +E+ +L + YR+ + + +L++ ++++ Q + + D NAIL+ + M+++
Sbjct: 280 SAWMEILILGVVYRSLSFEDELVYAEDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLE 339
Query: 323 ISAFACLCALTL 334
F L A+ L
Sbjct: 340 KEEFVTLKAIAL 351
>UNIPROTKB|E1BC39 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GeneTree:ENSGT00700000104391 GO:GO:0003708
OMA:RMSSKDR EMBL:DAAA02042485 EMBL:DAAA02042486 EMBL:DAAA02042487
IPI:IPI00685955 Ensembl:ENSBTAT00000061126 Uniprot:E1BC39
Length = 450
Score = 237 (88.5 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 68/187 (36%), Positives = 85/187 (45%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 116 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 175
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYREPNPLEPP- 157
CL+VGM+KE VR D ++G GR L+ + N +
Sbjct: 176 RFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHL 233
Query: 158 -IAEPEKIQQF---------YSLLTTSVD-------VIRHFADKIPGFSDLCKEDQELLF 200
+AEPEKI LTT D VI +A IPGFS L DQ L
Sbjct: 234 LVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 293
Query: 201 QSASLEL 207
QSA +E+
Sbjct: 294 QSAWMEI 300
Score = 142 (55.0 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 203 ASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQ 262
A E Y P+P P ++ + + L + VI +A IPGFS L DQ L Q
Sbjct: 236 AEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQ 294
Query: 263 SASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEID 322
SA +E+ +L + YR+ + + +L++ + ++++ Q + + D NAIL+ + M+++
Sbjct: 295 SAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLE 354
Query: 323 ISAFACLCALTL 334
F L A+ L
Sbjct: 355 KEEFVTLKAIAL 366
>UNIPROTKB|E2R7U1 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GeneTree:ENSGT00700000104391
CTD:2104 KO:K08554 GO:GO:0003708 OMA:RMSSKDR EMBL:AAEX03018324
RefSeq:XP_849276.1 ProteinModelPortal:E2R7U1
Ensembl:ENSCAFT00000017132 GeneID:478961 KEGG:cfa:478961
BindingDB:E2R7U1 NextBio:20854219 Uniprot:E2R7U1
Length = 458
Score = 237 (88.5 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 68/187 (36%), Positives = 85/187 (45%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 124 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 183
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYREPNPLEPP- 157
CL+VGM+KE VR D ++G GR L+ + N +
Sbjct: 184 RFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHL 241
Query: 158 -IAEPEKIQQF---------YSLLTTSVD-------VIRHFADKIPGFSDLCKEDQELLF 200
+AEPEKI LTT D VI +A IPGFS L DQ L
Sbjct: 242 LVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 301
Query: 201 QSASLEL 207
QSA +E+
Sbjct: 302 QSAWMEI 308
Score = 142 (55.0 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 203 ASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQ 262
A E Y P+P P ++ + + L + VI +A IPGFS L DQ L Q
Sbjct: 244 AEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQ 302
Query: 263 SASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEID 322
SA +E+ +L + YR+ + + +L++ + ++++ Q + + D NAIL+ + M+++
Sbjct: 303 SAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLE 362
Query: 323 ISAFACLCALTL 334
F L A+ L
Sbjct: 363 KEEFVTLKAIAL 374
>UNIPROTKB|P62508 [details] [associations]
symbol:ESRRG "Estrogen-related receptor gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0050682 "AF-2 domain binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0045893 GO:GO:0005654 EMBL:CH471100 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006367
DrugBank:DB00255 eggNOG:NOG282629 HOVERGEN:HBG108344 EMBL:AF094518
EMBL:AB020639 EMBL:AF058291 EMBL:AY388456 EMBL:AY388457
EMBL:AY388458 EMBL:AY388459 EMBL:AY388460 EMBL:AY388461
EMBL:AK131193 EMBL:AK290945 EMBL:AK291028 EMBL:AK291647
EMBL:CR749497 EMBL:AY528719 EMBL:AL445650 EMBL:AL512650
EMBL:AC096635 EMBL:AC096634 EMBL:AL391216 EMBL:AL512626
EMBL:AL513312 EMBL:AL603752 EMBL:BC008218 EMBL:BC064700
EMBL:AF117255 IPI:IPI00025743 IPI:IPI00427737 IPI:IPI00554597
IPI:IPI00940244 RefSeq:NP_001127757.1 RefSeq:NP_001230434.1
RefSeq:NP_001230435.1 RefSeq:NP_001230436.1 RefSeq:NP_001230438.1
RefSeq:NP_001230439.1 RefSeq:NP_001230440.1 RefSeq:NP_001230441.1
RefSeq:NP_001230442.1 RefSeq:NP_001230443.1 RefSeq:NP_001230444.1
RefSeq:NP_001230447.1 RefSeq:NP_001230448.1 RefSeq:NP_001429.2
RefSeq:NP_996317.1 RefSeq:NP_996318.1 UniGene:Hs.444225
UniGene:Hs.738938 PDB:1KV6 PDB:1TFC PDB:1VJB PDB:2E2R PDB:2EWP
PDB:2GP7 PDB:2GPO PDB:2GPP PDB:2GPU PDB:2GPV PDB:2P7A PDB:2P7G
PDB:2P7Z PDB:2ZAS PDB:2ZBS PDB:2ZKC PDBsum:1KV6 PDBsum:1TFC
PDBsum:1VJB PDBsum:2E2R PDBsum:2EWP PDBsum:2GP7 PDBsum:2GPO
PDBsum:2GPP PDBsum:2GPU PDBsum:2GPV PDBsum:2P7A PDBsum:2P7G
PDBsum:2P7Z PDBsum:2ZAS PDBsum:2ZBS PDBsum:2ZKC
ProteinModelPortal:P62508 SMR:P62508 IntAct:P62508
MINT:MINT-4824700 STRING:P62508 PhosphoSite:P62508 DMDM:50402102
PRIDE:P62508 DNASU:2104 Ensembl:ENST00000359162
Ensembl:ENST00000360012 Ensembl:ENST00000361395
Ensembl:ENST00000361525 Ensembl:ENST00000366938
Ensembl:ENST00000366940 Ensembl:ENST00000391890
Ensembl:ENST00000408911 Ensembl:ENST00000463665
Ensembl:ENST00000487276 Ensembl:ENST00000493603
Ensembl:ENST00000493748 GeneID:2104 KEGG:hsa:2104 UCSC:uc001hkw.2
CTD:2104 GeneCards:GC01M216676 HGNC:HGNC:3474 HPA:HPA044678
MIM:602969 neXtProt:NX_P62508 PharmGKB:PA27891 InParanoid:P62508
KO:K08554 BindingDB:P62508 ChEMBL:CHEMBL4245 ChiTaRS:ESRRG
EvolutionaryTrace:P62508 GenomeRNAi:2104 NextBio:8511
ArrayExpress:P62508 Bgee:P62508 Genevestigator:P62508
GermOnline:ENSG00000196482 GO:GO:0050682 GO:GO:0003708
Uniprot:P62508
Length = 458
Score = 237 (88.5 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 68/187 (36%), Positives = 85/187 (45%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 124 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 183
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYREPNPLEPP- 157
CL+VGM+KE VR D ++G GR L+ + N +
Sbjct: 184 RFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHL 241
Query: 158 -IAEPEKIQQF---------YSLLTTSVD-------VIRHFADKIPGFSDLCKEDQELLF 200
+AEPEKI LTT D VI +A IPGFS L DQ L
Sbjct: 242 LVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 301
Query: 201 QSASLEL 207
QSA +E+
Sbjct: 302 QSAWMEI 308
Score = 142 (55.0 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 203 ASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQ 262
A E Y P+P P ++ + + L + VI +A IPGFS L DQ L Q
Sbjct: 244 AEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQ 302
Query: 263 SASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEID 322
SA +E+ +L + YR+ + + +L++ + ++++ Q + + D NAIL+ + M+++
Sbjct: 303 SAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLE 362
Query: 323 ISAFACLCALTL 334
F L A+ L
Sbjct: 363 KEEFVTLKAIAL 374
>MGI|MGI:1347056 [details] [associations]
symbol:Esrrg "estrogen-related receptor gamma" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=NAS] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0007275 "multicellular organismal development"
evidence=NAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=NAS] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1347056
GO:GO:0007275 GO:GO:0005634 GO:GO:0045893 GO:GO:0005496
GO:GO:0046872 GO:GO:0003677 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0005516 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 GeneTree:ENSGT00700000104391 OrthoDB:EOG479F71
CTD:2104 KO:K08554 GO:GO:0003708 EMBL:AF117254 EMBL:AB093266
EMBL:AK052731 EMBL:BC082324 IPI:IPI00453754 IPI:IPI00468998
RefSeq:NP_001230721.1 RefSeq:NP_036065.1 UniGene:Mm.388156
UniGene:Mm.421613 UniGene:Mm.89989 PDB:1S9P PDB:1S9Q PDBsum:1S9P
PDBsum:1S9Q ProteinModelPortal:P62509 SMR:P62509 IntAct:P62509
STRING:P62509 PhosphoSite:P62509 PRIDE:P62509
Ensembl:ENSMUST00000027906 Ensembl:ENSMUST00000110938
Ensembl:ENSMUST00000110939 GeneID:26381 KEGG:mmu:26381
UCSC:uc007eaa.1 UCSC:uc007eab.1 InParanoid:P62509 OMA:RMSSKDR
BindingDB:P62509 NextBio:304297 Bgee:P62509 CleanEx:MM_ESRRG
Genevestigator:P62509 GermOnline:ENSMUSG00000026610 Uniprot:P62509
Length = 458
Score = 237 (88.5 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 68/187 (36%), Positives = 85/187 (45%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 124 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 183
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYREPNPLEPP- 157
CL+VGM+KE VR D ++G GR L+ + N +
Sbjct: 184 RFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHL 241
Query: 158 -IAEPEKIQQF---------YSLLTTSVD-------VIRHFADKIPGFSDLCKEDQELLF 200
+AEPEKI LTT D VI +A IPGFS L DQ L
Sbjct: 242 LVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 301
Query: 201 QSASLEL 207
QSA +E+
Sbjct: 302 QSAWMEI 308
Score = 142 (55.0 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 203 ASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQ 262
A E Y P+P P ++ + + L + VI +A IPGFS L DQ L Q
Sbjct: 244 AEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQ 302
Query: 263 SASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEID 322
SA +E+ +L + YR+ + + +L++ + ++++ Q + + D NAIL+ + M+++
Sbjct: 303 SAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLE 362
Query: 323 ISAFACLCALTL 334
F L A+ L
Sbjct: 363 KEEFVTLKAIAL 374
>RGD|1303236 [details] [associations]
symbol:Esrrg "estrogen-related receptor gamma" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0050682 "AF-2 domain binding"
evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:1303236
GO:GO:0005634 GO:GO:0045893 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 DrugBank:DB00255 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344
GeneTree:ENSGT00700000104391 OrthoDB:EOG479F71 CTD:2104 KO:K08554
GO:GO:0050682 GO:GO:0003708 OMA:RMSSKDR EMBL:AB126962 EMBL:AB126963
EMBL:AY341057 IPI:IPI00421426 IPI:IPI00454520 RefSeq:NP_976081.1
UniGene:Rn.214491 ProteinModelPortal:P62510 SMR:P62510
STRING:P62510 PhosphoSite:P62510 PRIDE:P62510
Ensembl:ENSRNOT00000003489 GeneID:360896 KEGG:rno:360896
UCSC:RGD:1303236 InParanoid:P62510 BindingDB:P62510 NextBio:674519
Genevestigator:P62510 GermOnline:ENSRNOG00000002593 Uniprot:P62510
Length = 458
Score = 237 (88.5 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 68/187 (36%), Positives = 85/187 (45%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 124 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 183
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYREPNPLEPP- 157
CL+VGM+KE VR D ++G GR L+ + N +
Sbjct: 184 RFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHL 241
Query: 158 -IAEPEKIQQF---------YSLLTTSVD-------VIRHFADKIPGFSDLCKEDQELLF 200
+AEPEKI LTT D VI +A IPGFS L DQ L
Sbjct: 242 LVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 301
Query: 201 QSASLEL 207
QSA +E+
Sbjct: 302 QSAWMEI 308
Score = 142 (55.0 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 203 ASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQ 262
A E Y P+P P ++ + + L + VI +A IPGFS L DQ L Q
Sbjct: 244 AEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQ 302
Query: 263 SASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEID 322
SA +E+ +L + YR+ + + +L++ + ++++ Q + + D NAIL+ + M+++
Sbjct: 303 SAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLE 362
Query: 323 ISAFACLCALTL 334
F L A+ L
Sbjct: 363 KEEFVTLKAIAL 374
>FB|FBgn0004865 [details] [associations]
symbol:Eip78C "Ecdysone-induced protein 78C" species:7227
"Drosophila melanogaster" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS;NAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0002165 "instar larval or
pupal development" evidence=NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 EMBL:AE014296 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 KO:K08701 eggNOG:NOG324222
EMBL:U01087 EMBL:U01088 EMBL:X98881 EMBL:X98882 EMBL:AF238308
EMBL:AF238309 EMBL:X73045 PIR:A49070 PIR:B49070 PIR:S43435
RefSeq:NP_001246862.1 RefSeq:NP_001246863.1 RefSeq:NP_524195.2
RefSeq:NP_730609.3 ProteinModelPortal:P45447 SMR:P45447
STRING:P45447 GeneID:40345 KEGG:dme:Dmel_CG18023 CTD:40345
FlyBase:FBgn0004865 InParanoid:P45447 OrthoDB:EOG4GMSC7
GenomeRNAi:40345 NextBio:818285 Bgee:P45447 GermOnline:CG18023
Uniprot:P45447
Length = 866
Score = 169 (64.5 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 33/72 (45%), Positives = 41/72 (56%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C VCGD A+ HYGV +CEGCKGFF+R++QK +Y CL D C V
Sbjct: 367 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEYRCLRDGKCLVIRLNRNRCQYCRFKK 426
Query: 103 CLQVGMVKEVVR 114
CL GM ++ VR
Sbjct: 427 CLSAGMSRDSVR 438
Score = 134 (52.2 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 35/110 (31%), Positives = 60/110 (54%)
Query: 226 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLI 285
QQF + +T V I FA ++PGF D ++DQ +L + E+++ +A R E T L
Sbjct: 667 QQFSARVTPGVQRIVEFAKRVPGFCDFTQDDQLILIKLGFFEVWLTHVA-RLINEAT-LT 724
Query: 286 FCNGVVLEKQQCQRSFGDDWLNAILEFCQSLH---LMEIDISAFACLCAL 332
+G L +QQ + + D++NA+L F +L+ L + +I F+ + L
Sbjct: 725 LDDGAYLTRQQLEILYDSDFVNALLNFANTLNAYGLSDTEIGLFSAMVLL 774
Score = 78 (32.5 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 165 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF 208
QQF + +T V I FA ++PGF D ++DQ +L + E++
Sbjct: 667 QQFSARVTPGVQRIVEFAKRVPGFCDFTQDDQLILIKLGFFEVW 710
Score = 37 (18.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 7/41 (17%), Positives = 14/41 (34%)
Query: 5 RSSSSESPKLRHXXXXXXXXXXXGCDTSRPTPPSPSQLCAV 45
+ P+L+ G P+ P Q+C++
Sbjct: 492 QQQQQHQPQLQQHHQLQQQPHVSGVRVKTPSTPQTPQMCSI 532
>UNIPROTKB|F6V776 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 OMA:EDRHLGS Ensembl:ENSCAFT00000027147
EMBL:AAEX03005862 EMBL:AAEX03005860 EMBL:AAEX03005861
Uniprot:F6V776
Length = 438
Score = 234 (87.4 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 67/185 (36%), Positives = 87/185 (47%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 104 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 163
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRG----RLXXXXXXXXXXXXXX-----XXXLIT-ALY 148
CL+VGM+KE VR D ++G R RL +++ L
Sbjct: 164 RFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLV 223
Query: 149 REPNPLE--PPIAEPEKIQQFYSLLTTSVD----VIRHFADKIPGFSDLCKEDQELLFQS 202
EP+ L PP PE + + L D VI +A IPGFS+L DQ L QS
Sbjct: 224 AEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSNLSLGDQMSLLQS 283
Query: 203 ASLEL 207
A +E+
Sbjct: 284 AWMEI 288
Score = 131 (51.2 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 207 LFYREPNPLE--PPIAEPEKIQQFYSLLTTSVD----VIRHFADKIPGFSDLCKEDQELL 260
L EP+ L PP PE + + L D VI +A IPGFS+L DQ L
Sbjct: 221 LLVAEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSNLSLGDQMSL 280
Query: 261 FQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLME 320
QSA +E+ +L + YR+ D KL++ +++++ + + + AIL+ + ++
Sbjct: 281 LQSAWMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLK 340
Query: 321 IDISAFACLCALTL 334
++ F L AL L
Sbjct: 341 VEKEEFVTLKALAL 354
>UNIPROTKB|E2QSQ7 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
Ensembl:ENSCAFT00000027147 Uniprot:E2QSQ7
Length = 441
Score = 234 (87.4 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 67/185 (36%), Positives = 87/185 (47%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 158
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRG----RLXXXXXXXXXXXXXX-----XXXLIT-ALY 148
CL+VGM+KE VR D ++G R RL +++ L
Sbjct: 159 RFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLV 218
Query: 149 REPNPLE--PPIAEPEKIQQFYSLLTTSVD----VIRHFADKIPGFSDLCKEDQELLFQS 202
EP+ L PP PE + + L D VI +A IPGFS+L DQ L QS
Sbjct: 219 AEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSNLSLGDQMSLLQS 278
Query: 203 ASLEL 207
A +E+
Sbjct: 279 AWMEI 283
Score = 131 (51.2 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 207 LFYREPNPLE--PPIAEPEKIQQFYSLLTTSVD----VIRHFADKIPGFSDLCKEDQELL 260
L EP+ L PP PE + + L D VI +A IPGFS+L DQ L
Sbjct: 216 LLVAEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSNLSLGDQMSL 275
Query: 261 FQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLME 320
QSA +E+ +L + YR+ D KL++ +++++ + + + AIL+ + ++
Sbjct: 276 LQSAWMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLK 335
Query: 321 IDISAFACLCALTL 334
++ F L AL L
Sbjct: 336 VEKEEFVTLKALAL 349
>UNIPROTKB|F1N7R0 [details] [associations]
symbol:RORA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046068 "cGMP metabolic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043030 "regulation of
macrophage activation" evidence=IEA] [GO:0021702 "cerebellar
Purkinje cell differentiation" evidence=IEA] [GO:0006809 "nitric
oxide biosynthetic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0030522
GO:GO:0006809 GO:GO:0021702 GO:GO:0046068 GO:GO:0043030
GeneTree:ENSGT00700000104109 CTD:6095 KO:K08532 OMA:VAAQIEI
EMBL:DAAA02028787 EMBL:DAAA02028778 EMBL:DAAA02028779
EMBL:DAAA02028780 EMBL:DAAA02028781 EMBL:DAAA02028782
EMBL:DAAA02028783 EMBL:DAAA02028784 EMBL:DAAA02028785
EMBL:DAAA02028786 IPI:IPI00708401 RefSeq:NP_001179790.1
UniGene:Bt.56061 Ensembl:ENSBTAT00000021144 GeneID:535597
KEGG:bta:535597 NextBio:20876785 Uniprot:F1N7R0
Length = 523
Score = 171 (65.3 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 37/116 (31%), Positives = 54/116 (46%)
Query: 1 TQLGRSSSSESPKLRHXXXXXXXXXXXGCDTSRPTPPSPSQL--CAVCGDIAACQHYGVR 58
T L + S+ +S G ++ T S ++ C +CGD ++ HYGV
Sbjct: 29 TPLNQESARKSEPPAPVRRQSYSSTSRGISVTKKTHTSQIEIIPCKICGDKSSGIHYGVI 88
Query: 59 TCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXXCLQVGMVKEVVR 114
TCEGCKGFF+R+ Q + Y C K C +D CL VGM ++ V+
Sbjct: 89 TCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVK 144
Score = 123 (48.4 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 43/169 (25%), Positives = 84/169 (49%)
Query: 172 TTSVDVIRHFADKIP-GFSDLCKEDQELLFQSASLELFYREPNPLEP-PIAEPEKIQQFY 229
T S+ + H A I + C+ +E L Q + + F +E +E + E + Q
Sbjct: 267 TVSMAELEHLAQNISKSHLETCQYLREEL-QQITWQTFLQEE--IENYQNKQREVMWQLC 323
Query: 230 SL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCN 288
++ +T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +R+ R ++ +
Sbjct: 324 AIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMC-RAFDSQNNTVYFD 382
Query: 289 GVVLEKQQCQRSFG-DDWLNAILEFCQSL---HLMEIDISAFACLCALT 333
G +S G +D+++ + EF +SL HL E +I+ F+ ++
Sbjct: 383 GKYASPDVF-KSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMS 430
Score = 81 (33.6 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 171 LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY 209
+T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +
Sbjct: 327 ITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVF 365
>ZFIN|ZDB-GENE-060306-2 [details] [associations]
symbol:roraa "RAR-related orphan receptor A, paralog
a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-060306-2
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GeneTree:ENSGT00700000104109
EMBL:CABZ01027882 EMBL:CABZ01027883 EMBL:CABZ01027884
EMBL:CABZ01027885 EMBL:CU468885 IPI:IPI00995582
ProteinModelPortal:F1QLY4 Ensembl:ENSDART00000121449 Bgee:F1QLY4
Uniprot:F1QLY4
Length = 516
Score = 164 (62.8 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C K C +D
Sbjct: 66 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNRCQHCRLQK 125
Query: 103 CLQVGMVKEVVR 114
CL VGM ++ V+
Sbjct: 126 CLAVGMSRDAVK 137
Score = 131 (51.2 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 43/169 (25%), Positives = 86/169 (50%)
Query: 172 TTSVDVIRHFADKIP-GFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQ-QFY 229
T S+ + H A I + C+ +E L Q + + F +E +E ++P ++ Q
Sbjct: 260 TVSMAELEHLAQNISKSHMETCQYLREEL-QQMTWQAFLQEE--VENYQSKPREVMWQLC 316
Query: 230 SL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCN 288
++ +T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +R+ R ++ +
Sbjct: 317 AIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFVRMC-RAFDPQNNTVYFD 375
Query: 289 GVVLEKQQCQRSFG-DDWLNAILEFCQ---SLHLMEIDISAFACLCALT 333
G +S G DD ++++ EF + S+HL E +I+ F+ ++
Sbjct: 376 GKYAGPDVF-KSLGCDDLISSVFEFGKNLCSMHLSEDEIALFSAFVLMS 423
Score = 84 (34.6 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 159 AEPEKIQ-QFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL-FYREPNPL 215
++P ++ Q ++ +T ++ + FA +I GF +LC+ DQ +L ++ SLE+ F R
Sbjct: 306 SKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFVRMCRAF 365
Query: 216 EP 217
+P
Sbjct: 366 DP 367
>UNIPROTKB|F1NFX1 [details] [associations]
symbol:NR1D2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00700000104109 EMBL:AADN02001116 EMBL:AADN02001117
EMBL:AADN02001118 IPI:IPI00584067 Ensembl:ENSGALT00000031164
Uniprot:F1NFX1
Length = 548
Score = 170 (64.9 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 32/74 (43%), Positives = 43/74 (58%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL + C +
Sbjct: 76 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNNNCSIMRMNRNRCQQCRF 135
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 136 KKCLSVGMSRDAVR 149
Score = 124 (48.7 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 30/121 (24%), Positives = 58/121 (47%)
Query: 215 LEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLA 274
++P + E ++F T +V + FA +IPGF DL + DQ L ++ + E+ ++R A
Sbjct: 361 VDPNKSGHEVWEEFSLSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFA 420
Query: 275 YRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
A + + F +G D LN++ EF + L+ +++ + A+ L
Sbjct: 421 SLFDARERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVVL 480
Query: 335 I 335
+
Sbjct: 481 V 481
Score = 79 (32.9 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 143 LITALYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQS 202
L+ + + P+ ++P + E ++F T +V + FA +IPGF DL + DQ L ++
Sbjct: 351 LVCPMSKTPH-VDPNKSGHEVWEEFSLSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKA 409
Query: 203 ASLEL 207
+ E+
Sbjct: 410 GTFEV 414
>UNIPROTKB|F1N0K9 [details] [associations]
symbol:LOC100852315 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001834 "trophectodermal cell
proliferation" evidence=IEA] [GO:0001831 "trophectodermal cellular
morphogenesis" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0001892
GO:GO:0019827 GO:GO:0001831 GeneTree:ENSGT00700000104391
OMA:EDRHLGS GO:GO:0001834 EMBL:DAAA02029654 EMBL:DAAA02029655
IPI:IPI00690687 ProteinModelPortal:F1N0K9
Ensembl:ENSBTAT00000016290 Uniprot:F1N0K9
Length = 478
Score = 234 (87.4 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 67/185 (36%), Positives = 87/185 (47%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 144 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 203
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRG----RLXXXXXXXXXXXXXX-----XXXLIT-ALY 148
CL+VGM+KE VR D ++G R RL +++ L
Sbjct: 204 RFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLV 263
Query: 149 REPNPLE--PPIAEPEKIQQFYSLLTTSVD----VIRHFADKIPGFSDLCKEDQELLFQS 202
EP+ L PP PE + + L D VI +A IPGFS+L DQ L QS
Sbjct: 264 AEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSNLSLGDQMSLLQS 323
Query: 203 ASLEL 207
A +E+
Sbjct: 324 AWMEI 328
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 207 LFYREPNPLE--PPIAEPEKIQQFYSLLTTSVD----VIRHFADKIPGFSDLCKEDQELL 260
L EP+ L PP PE + + L D VI +A IPGFS+L DQ L
Sbjct: 261 LLVAEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSNLSLGDQMSL 320
Query: 261 FQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLME 320
QSA +E+ +L + YR+ D KL++ +++++ + + + AIL+ + ++
Sbjct: 321 LQSAWMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLK 380
Query: 321 IDISAFACLCALTL 334
++ F L AL L
Sbjct: 381 VEKEEFVTLKALAL 394
>UNIPROTKB|E1BRD5 [details] [associations]
symbol:NR1D2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104109 OMA:MMNSQFS EMBL:AADN02001116
EMBL:AADN02001117 EMBL:AADN02001118 IPI:IPI00821361
Ensembl:ENSGALT00000018420 Uniprot:E1BRD5
Length = 575
Score = 170 (64.9 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 32/74 (43%), Positives = 43/74 (58%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL + C +
Sbjct: 103 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNNNCSIMRMNRNRCQQCRF 162
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 163 KKCLSVGMSRDAVR 176
Score = 124 (48.7 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 30/121 (24%), Positives = 58/121 (47%)
Query: 215 LEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLA 274
++P + E ++F T +V + FA +IPGF DL + DQ L ++ + E+ ++R A
Sbjct: 388 VDPNKSGHEVWEEFSLSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFA 447
Query: 275 YRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
A + + F +G D LN++ EF + L+ +++ + A+ L
Sbjct: 448 SLFDARERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVVL 507
Query: 335 I 335
+
Sbjct: 508 V 508
Score = 79 (32.9 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 143 LITALYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQS 202
L+ + + P+ ++P + E ++F T +V + FA +IPGF DL + DQ L ++
Sbjct: 378 LVCPMSKTPH-VDPNKSGHEVWEEFSLSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKA 436
Query: 203 ASLEL 207
+ E+
Sbjct: 437 GTFEV 441
>UNIPROTKB|F1S2P9 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001834 "trophectodermal cell
proliferation" evidence=IEA] [GO:0001831 "trophectodermal cellular
morphogenesis" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0001892
GO:GO:0019827 GO:GO:0001831 GeneTree:ENSGT00700000104391
OMA:EDRHLGS GO:GO:0001834 EMBL:CT757460 Ensembl:ENSSSCT00000002655
Uniprot:F1S2P9
Length = 504
Score = 234 (87.4 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 67/185 (36%), Positives = 87/185 (47%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 158
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRG----RLXXXXXXXXXXXXXX-----XXXLIT-ALY 148
CL+VGM+KE VR D ++G R RL +++ L
Sbjct: 159 RFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLV 218
Query: 149 REPNPLE--PPIAEPEKIQQFYSLLTTSVD----VIRHFADKIPGFSDLCKEDQELLFQS 202
EP+ L PP PE + + L D VI +A IPGFS+L DQ L QS
Sbjct: 219 AEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSNLSLGDQMSLLQS 278
Query: 203 ASLEL 207
A +E+
Sbjct: 279 AWMEI 283
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 207 LFYREPNPLE--PPIAEPEKIQQFYSLLTTSVD----VIRHFADKIPGFSDLCKEDQELL 260
L EP+ L PP PE + + L D VI +A IPGFS+L DQ L
Sbjct: 216 LLVAEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSNLSLGDQMSL 275
Query: 261 FQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLME 320
QSA +E+ +L + YR+ D KL++ +++++ + + + AIL+ + ++
Sbjct: 276 LQSAWMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLK 335
Query: 321 IDISAFACLCALTL 334
++ F L AL L
Sbjct: 336 VEKEEFVTLKALAL 349
>MGI|MGI:2449205 [details] [associations]
symbol:Nr1d2 "nuclear receptor subfamily 1, group D, member
2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004887 "thyroid
hormone receptor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR001728 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:U09504 MGI:MGI:2449205 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0004887 eggNOG:NOG324222
GeneTree:ENSGT00700000104109 HOGENOM:HOG000261691
HOVERGEN:HBG106790 CTD:9975 KO:K08531 OMA:MMNSQFS OrthoDB:EOG4V170J
EMBL:U12142 IPI:IPI00119178 PIR:A57048 RefSeq:NP_035714.3
UniGene:Mm.26587 PDB:1EFJ PDBsum:1EFJ ProteinModelPortal:Q60674
SMR:Q60674 IntAct:Q60674 STRING:Q60674 PhosphoSite:Q60674
PRIDE:Q60674 Ensembl:ENSMUST00000090543 GeneID:353187
KEGG:mmu:353187 InParanoid:Q60674 NextBio:400331 Bgee:Q60674
CleanEx:MM_NR1D2 Genevestigator:Q60674
GermOnline:ENSMUSG00000021775 Uniprot:Q60674
Length = 576
Score = 171 (65.3 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL ++ C +
Sbjct: 102 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRF 161
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 162 KKCLSVGMSRDAVR 175
Score = 122 (48.0 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 30/123 (24%), Positives = 59/123 (47%)
Query: 218 PIAEPEKI-----QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLR 272
P +P+K ++F T +V + FA +IPGF DL + DQ L ++ + E+ ++R
Sbjct: 387 PYVDPQKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVR 446
Query: 273 LAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCAL 332
A A++ + F +G D L+++ EF + L+ +++ + A+
Sbjct: 447 FASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLSSMFEFSEKLNALQLSDEEMSLFTAV 506
Query: 333 TLI 335
L+
Sbjct: 507 VLV 509
Score = 78 (32.5 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 143 LITALYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQS 202
L+ + + P ++P + E ++F T +V + FA +IPGF DL + DQ L ++
Sbjct: 379 LVCPMSKSPY-VDPQKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKA 437
Query: 203 ASLEL 207
+ E+
Sbjct: 438 GTFEV 442
>UNIPROTKB|E7EWD9 [details] [associations]
symbol:ESRRB "Steroid hormone receptor ERR2" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AC008050
EMBL:AC016543 HGNC:HGNC:3473 ChiTaRS:ESRRB IPI:IPI00965112
ProteinModelPortal:E7EWD9 SMR:E7EWD9 Ensembl:ENST00000512784
ArrayExpress:E7EWD9 Bgee:E7EWD9 Uniprot:E7EWD9
Length = 508
Score = 233 (87.1 bits), Expect = 8.7e-19, P = 8.7e-19
Identities = 67/185 (36%), Positives = 86/185 (46%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 104 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 163
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRG----RLXXXXXXXXXXXXXX-----XXXLIT-ALY 148
CL+VGM+KE VR D ++G R RL +++ L
Sbjct: 164 RFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLV 223
Query: 149 REPNPLE--PPIAEPEKIQQFYSLLTTSVD----VIRHFADKIPGFSDLCKEDQELLFQS 202
EP+ L PP PE + + L D VI +A IPGFS L DQ L QS
Sbjct: 224 AEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGDQMSLLQS 283
Query: 203 ASLEL 207
A +E+
Sbjct: 284 AWMEI 288
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 207 LFYREPNPLE--PPIAEPEKIQQFYSLLTTSVD----VIRHFADKIPGFSDLCKEDQELL 260
L EP+ L PP PE + + L D VI +A IPGFS L DQ L
Sbjct: 221 LLVAEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGDQMSL 280
Query: 261 FQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLME 320
QSA +E+ +L + YR+ D KL++ +++++ + + + AIL+ + ++
Sbjct: 281 LQSAWMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLK 340
Query: 321 IDISAFACLCALTL 334
++ F L AL L
Sbjct: 341 VEKEEFVTLKALAL 354
>UNIPROTKB|O95718 [details] [associations]
symbol:ESRRB "Steroid hormone receptor ERR2" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0001834
"trophectodermal cell proliferation" evidence=IEA] [GO:0019827
"stem cell maintenance" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0001892
"embryonic placenta development" evidence=NAS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000980 "RNA polymerase II distal enhancer sequence-specific
DNA binding" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005654 GO:GO:0005496 GO:GO:0046872 GO:GO:0004879
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000980 GO:GO:0003713
GO:GO:0008134 GO:GO:0006367 GO:GO:0019827 Orphanet:90636
GO:GO:0001831 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 EMBL:AF094517 EMBL:AY451389 EMBL:AY451390
EMBL:AB307714 EMBL:HQ692852 EMBL:AC008050 EMBL:AC016543
EMBL:BC131517 IPI:IPI00032812 RefSeq:NP_004443.3 UniGene:Hs.435845
PDB:1LO1 PDBsum:1LO1 ProteinModelPortal:O95718 SMR:O95718
STRING:O95718 PhosphoSite:O95718 PaxDb:O95718 PRIDE:O95718
DNASU:2103 Ensembl:ENST00000261532 Ensembl:ENST00000380887
Ensembl:ENST00000505752 Ensembl:ENST00000509242
Ensembl:ENST00000556177 GeneID:2103 KEGG:hsa:2103 CTD:2103
GeneCards:GC14P076837 HGNC:HGNC:3473 MIM:602167 MIM:608565
neXtProt:NX_O95718 PharmGKB:PA27889 KO:K08553 OMA:EDRHLGS
OrthoDB:EOG479F71 BindingDB:O95718 ChEMBL:CHEMBL3751 ChiTaRS:ESRRB
EvolutionaryTrace:O95718 GenomeRNAi:2103 NextBio:8507
ArrayExpress:O95718 Bgee:O95718 CleanEx:HS_ESRRB
Genevestigator:O95718 GermOnline:ENSG00000119715 GO:GO:0001834
Uniprot:O95718
Length = 508
Score = 233 (87.1 bits), Expect = 8.7e-19, P = 8.7e-19
Identities = 67/185 (36%), Positives = 86/185 (46%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 158
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRG----RLXXXXXXXXXXXXXX-----XXXLIT-ALY 148
CL+VGM+KE VR D ++G R RL +++ L
Sbjct: 159 RFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLV 218
Query: 149 REPNPLE--PPIAEPEKIQQFYSLLTTSVD----VIRHFADKIPGFSDLCKEDQELLFQS 202
EP+ L PP PE + + L D VI +A IPGFS L DQ L QS
Sbjct: 219 AEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGDQMSLLQS 278
Query: 203 ASLEL 207
A +E+
Sbjct: 279 AWMEI 283
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 207 LFYREPNPLE--PPIAEPEKIQQFYSLLTTSVD----VIRHFADKIPGFSDLCKEDQELL 260
L EP+ L PP PE + + L D VI +A IPGFS L DQ L
Sbjct: 216 LLVAEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGDQMSL 275
Query: 261 FQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLME 320
QSA +E+ +L + YR+ D KL++ +++++ + + + AIL+ + ++
Sbjct: 276 LQSAWMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLK 335
Query: 321 IDISAFACLCALTL 334
++ F L AL L
Sbjct: 336 VEKEEFVTLKALAL 349
>FB|FBgn0000546 [details] [associations]
symbol:EcR "Ecdysone receptor" species:7227 "Drosophila
melanogaster" [GO:0004884 "ecdysteroid hormone receptor activity"
evidence=NAS;IDA;IPI] [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA;IPI]
[GO:0007286 "spermatid development" evidence=IMP] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0008232
"activator ecdysone receptor complex" evidence=IDA] [GO:0046982
"protein heterodimerization activity" evidence=IDA;IPI] [GO:0008230
"ecdysone receptor holocomplex" evidence=TAS;IPI] [GO:0007291
"sperm individualization" evidence=IMP] [GO:0008231 "repressor
ecdysone receptor complex" evidence=IPI] [GO:0070491 "repressing
transcription factor binding" evidence=IPI] [GO:0048477 "oogenesis"
evidence=NAS;IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IGI;IMP] [GO:0035188 "hatching"
evidence=IMP] [GO:0035076 "ecdysone receptor-mediated signaling
pathway" evidence=IMP] [GO:0035073 "pupariation" evidence=IMP]
[GO:0007552 "metamorphosis" evidence=IMP] [GO:0018990 "ecdysis,
chitin-based cuticle" evidence=IMP] [GO:0035193 "larval central
nervous system remodeling" evidence=IMP;TAS] [GO:0003677 "DNA
binding" evidence=IDA;NAS] [GO:0005496 "steroid binding"
evidence=IEA;NAS] [GO:0005700 "polytene chromosome" evidence=NAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007298
"border follicle cell migration" evidence=IMP] [GO:0016322 "neuron
remodeling" evidence=IMP] [GO:0035072 "ecdysone-mediated induction
of salivary gland cell autophagic cell death" evidence=NAS]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=NAS;TAS]
[GO:0007561 "imaginal disc eversion" evidence=TAS] [GO:0040034
"regulation of development, heterochronic" evidence=TAS]
[GO:0016319 "mushroom body development" evidence=IGI] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0008258 "head
involution" evidence=IMP] [GO:0008362 "chitin-based embryonic
cuticle biosynthetic process" evidence=IMP] [GO:0007390 "germ-band
shortening" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0048813 "dendrite morphogenesis"
evidence=IMP;NAS] [GO:0006914 "autophagy" evidence=IMP] [GO:0035180
"larval wandering behavior" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0010002 "cardioblast
differentiation" evidence=IMP] [GO:0035053 "dorsal vessel heart
proper cell fate commitment" evidence=IMP] [GO:0048738 "cardiac
muscle tissue development" evidence=IMP] [GO:0007422 "peripheral
nervous system development" evidence=IMP] [GO:0048666 "neuron
development" evidence=IMP] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0030425 "dendrite" evidence=IMP] [GO:0042220
"response to cocaine" evidence=IGI] [GO:0007488 "histoblast
morphogenesis" evidence=IMP] [GO:0008544 "epidermis development"
evidence=IMP] [GO:0044130 "negative regulation of growth of
symbiont in host" evidence=IMP] [GO:0043065 "positive regulation of
apoptotic process" evidence=IMP] [GO:0007468 "regulation of
rhodopsin gene expression" evidence=IMP] [GO:0007616 "long-term
memory" evidence=IMP] [GO:0035297 "regulation of Malpighian tubule
diameter" evidence=IMP] [GO:0007443 "Malpighian tubule
morphogenesis" evidence=IMP] [GO:0045938 "positive regulation of
circadian sleep/wake cycle, sleep" evidence=IMP] [GO:0035206
"regulation of hemocyte proliferation" evidence=IMP] [GO:0007281
"germ cell development" evidence=IMP] [GO:0035075 "response to
ecdysone" evidence=IMP] [GO:0001225 "RNA polymerase II
transcription coactivator binding" evidence=IPI] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003069
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01283 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 EMBL:AE013599
GO:GO:0008340 GO:GO:0035188 GO:GO:0005737 GO:GO:0045892
GO:GO:0005496 GO:GO:0046872 GO:GO:0003677 GO:GO:0008362
GO:GO:0042220 GO:GO:0030425 GO:GO:0043565 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006914
GO:GO:0016322 GO:GO:0007155 GO:GO:0007616 GO:GO:0007422
GO:GO:0048738 GO:GO:0010002 GO:GO:0035053 GO:GO:0001077
GO:GO:0043065 GO:GO:0007298 GO:GO:0048813 GO:GO:0045938
GO:GO:0007517 GO:GO:0007291 GO:GO:0044130 GO:GO:0016319
GO:GO:0007409 GO:GO:0046982 GO:GO:0035073 GO:GO:0040034
GO:GO:0005700 GO:GO:0035206 GO:GO:0008544 GO:GO:0007476
GO:GO:0035072 GO:GO:0008258 GO:GO:0018990 GO:GO:0007488
GO:GO:0008231 EMBL:M74078 EMBL:S63761 EMBL:AY075461 EMBL:AY058575
EMBL:BT012469 EMBL:BT015234 PIR:A40709 PIR:A41055
RefSeq:NP_001163061.1 RefSeq:NP_724456.1 RefSeq:NP_724457.1
RefSeq:NP_724458.1 RefSeq:NP_724459.1 RefSeq:NP_724460.1
UniGene:Dm.4159 PDB:1R0N PDB:1R0O PDB:2HAN PDBsum:1R0N PDBsum:1R0O
PDBsum:2HAN ProteinModelPortal:P34021 SMR:P34021 DIP:DIP-158N
IntAct:P34021 MINT:MINT-294442 STRING:P34021 PaxDb:P34021
PRIDE:P34021 EnsemblMetazoa:FBtr0086011 EnsemblMetazoa:FBtr0302439
GeneID:35540 KEGG:dme:Dmel_CG1765 CTD:35540 FlyBase:FBgn0000546
eggNOG:NOG285805 GeneTree:ENSGT00680000099585 HOGENOM:HOG000244965
InParanoid:P34021 KO:K14034 OMA:EGCDAKK OrthoDB:EOG431ZD7
PhylomeDB:P34021 ChEMBL:CHEMBL5676 EvolutionaryTrace:P34021
GenomeRNAi:35540 NextBio:793933 Bgee:P34021 GermOnline:CG1765
GO:GO:0004884 GO:GO:0007390 GO:GO:0007561 GO:GO:0035193
GO:GO:0035180 GO:GO:0035297 GO:GO:0007468 Uniprot:P34021
Length = 878
Score = 179 (68.1 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 37/89 (41%), Positives = 45/89 (50%)
Query: 29 CDTSR----PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKA 84
CD + P P +LC VCGD A+ HY TCEGCKGFF+R+V K + Y C +A
Sbjct: 246 CDAKKSKKGPAPRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRA 305
Query: 85 CPVDXXXXXXXXXXXXXXCLQVGMVKEVV 113
C +D CL VGM E V
Sbjct: 306 CEMDMYMRRKCQECRLKKCLAVGMRPECV 334
Score = 116 (45.9 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 27/100 (27%), Positives = 51/100 (51%)
Query: 235 SVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEK 294
+V +I FA +P F+ + +EDQ L ++ S E+ +LR+A R + F N +
Sbjct: 470 TVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLRMARRYDHSSDSIFFANNRSYTR 529
Query: 295 QQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
+ + D + +L FC+ + M++D +A L A+ +
Sbjct: 530 DSYKMAGMADNIEDLLHFCRQMFSMKVDNVEYALLTAIVI 569
Score = 55 (24.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 174 SVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
+V +I FA +P F+ + +EDQ L ++ S E+
Sbjct: 470 TVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEV 503
>UNIPROTKB|F1NBB9 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0001834
"trophectodermal cell proliferation" evidence=IEA] [GO:0001892
"embryonic placenta development" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104391
OMA:EDRHLGS EMBL:AADN02003482 EMBL:AADN02003483 IPI:IPI00811660
Ensembl:ENSGALT00000016888 Uniprot:F1NBB9
Length = 438
Score = 230 (86.0 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 66/187 (35%), Positives = 85/187 (45%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 104 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 163
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALYREPNPLEPP- 157
CL+VGM+KE VR D ++G GR + + +
Sbjct: 164 RFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRLDSESSTYLSLQIPPPAKKPLTKIVSHL 221
Query: 158 -IAEPEKI---------QQFYSLLTTSVD-------VIRHFADKIPGFSDLCKEDQELLF 200
+AEPEKI + LTT D VI +A IPGFS+L DQ L
Sbjct: 222 LVAEPEKIYAMPDPTMPESDIKALTTLCDLADRELVVIIGWAKHIPGFSNLSLGDQMSLL 281
Query: 201 QSASLEL 207
QSA +E+
Sbjct: 282 QSAWMEI 288
Score = 132 (51.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 41/149 (27%), Positives = 71/149 (47%)
Query: 186 PGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADK 245
P L K LL A E Y P+P P ++ + + L + VI +A
Sbjct: 209 PAKKPLTKIVSHLLV--AEPEKIYAMPDPTMPE-SDIKALTTLCDLADRELVVIIGWAKH 265
Query: 246 IPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDW 305
IPGFS+L DQ L QSA +E+ +L + YR+ + KL++ +++++ + + +
Sbjct: 266 IPGFSNLSLGDQMSLLQSAWMEILILGIVYRSLPYEDKLVYAEDYIMDEEHSRLTGLLEL 325
Query: 306 LNAILEFCQSLHLMEIDISAFACLCALTL 334
AIL+ + ++++ F L AL L
Sbjct: 326 YLAILQLVRRYKKLKVEKEEFVTLKALAL 354
>ZFIN|ZDB-GENE-050410-7 [details] [associations]
symbol:nr1h3 "nuclear receptor subfamily 1, group H,
member 3" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-050410-7 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GeneTree:ENSGT00680000099585
HOVERGEN:HBG108655 InterPro:IPR023257 PRINTS:PR02034
HOGENOM:HOG000220845 CTD:10062 KO:K08536 EMBL:CABZ01003670
EMBL:CABZ01003671 EMBL:CABZ01003672 EMBL:CABZ01009563
EMBL:CABZ01009564 EMBL:CABZ01009565 EMBL:CABZ01009566
EMBL:CABZ01009567 EMBL:CABZ01072909 EMBL:BC092160 IPI:IPI00498273
RefSeq:NP_001017545.1 UniGene:Dr.29884 SMR:Q56A56
Ensembl:ENSDART00000130731 GeneID:548341 KEGG:dre:548341
InParanoid:Q56A56 NextBio:20879392 Uniprot:Q56A56
Length = 412
Score = 164 (62.8 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 34/93 (36%), Positives = 49/93 (52%)
Query: 28 GCDTSRPTPPSPSQL----CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADK 83
G R P+P L C+VCGD A+ HY V +CEGCKGFF+R+V KG++Y C
Sbjct: 46 GQPVKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAQYSCKNSG 105
Query: 84 ACPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTD 116
C +D C + GM+++ V ++
Sbjct: 106 RCEMDMYMRRKCQQCRLRKCREAGMLEQCVLSE 138
Score = 123 (48.4 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 31/126 (24%), Positives = 62/126 (49%)
Query: 212 PNPLEPPIAE--PEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF 269
P +P E ++ F L SV I FA ++PGF +L +EDQ L +++++E+
Sbjct: 204 PQSQDPQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIM 263
Query: 270 VLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFAC 328
+L + R + F K+ ++ +++N I EF + ++ + +D + +A
Sbjct: 264 LLETSRRYNPAIDSITFLKDFTYNKEDFAKAGLQLEFINPIFEFSKGMNDLHLDEAEYAL 323
Query: 329 LCALTL 334
L A+ +
Sbjct: 324 LIAINI 329
Score = 82 (33.9 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 151 PNPLEPPIAE--PEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELF 208
P +P E ++ F L SV I FA ++PGF +L +EDQ L +++++E+
Sbjct: 204 PQSQDPQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIM 263
Query: 209 YRE 211
E
Sbjct: 264 LLE 266
>MGI|MGI:104661 [details] [associations]
symbol:Rora "RAR-related orphan receptor alpha" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006809 "nitric
oxide biosynthetic process" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IMP] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0043030 "regulation
of macrophage activation" evidence=IMP] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;ISO;IDA] [GO:0046068 "cGMP metabolic process"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:104661 GO:GO:0005654 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0030522 GO:GO:0006809
GO:GO:0021702 GO:GO:0046068 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0043030 eggNOG:NOG324222
GeneTree:ENSGT00700000104109 CTD:6095 HOGENOM:HOG000010200
HOVERGEN:HBG106848 KO:K08532 OMA:VAAQIEI ChiTaRS:RORA EMBL:U53228
EMBL:Y08640 EMBL:Z82994 EMBL:S82720 EMBL:D45910 EMBL:BC003757
IPI:IPI00122512 IPI:IPI00395039 PIR:S68517 RefSeq:NP_038674.1
UniGene:Mm.378450 UniGene:Mm.391890 UniGene:Mm.427266
UniGene:Mm.490614 ProteinModelPortal:P51448 SMR:P51448
DIP:DIP-35351N IntAct:P51448 STRING:P51448 PhosphoSite:P51448
PRIDE:P51448 Ensembl:ENSMUST00000034766 Ensembl:ENSMUST00000113624
GeneID:19883 KEGG:mmu:19883 InParanoid:P51448 OrthoDB:EOG4GHZP3
NextBio:297388 Bgee:P51448 CleanEx:MM_RORA Genevestigator:P51448
GermOnline:ENSMUSG00000032238 Uniprot:P51448
Length = 523
Score = 167 (63.8 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 33/89 (37%), Positives = 47/89 (52%)
Query: 28 GCDTSRPTPPSPSQL--CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKAC 85
G ++ T S ++ C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C K C
Sbjct: 56 GISVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNC 115
Query: 86 PVDXXXXXXXXXXXXXXCLQVGMVKEVVR 114
+D CL VGM ++ V+
Sbjct: 116 LIDRTSRNRCQHCRLQKCLAVGMSRDAVK 144
Score = 123 (48.4 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 43/169 (25%), Positives = 84/169 (49%)
Query: 172 TTSVDVIRHFADKIP-GFSDLCKEDQELLFQSASLELFYREPNPLEP-PIAEPEKIQQFY 229
T S+ + H A I + C+ +E L Q + + F +E +E + E + Q
Sbjct: 267 TVSMAELEHLAQNISKSHLETCQYLREEL-QQITWQTFLQEE--IENYQNKQREVMWQLC 323
Query: 230 SL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCN 288
++ +T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +R+ R ++ +
Sbjct: 324 AIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMC-RAFDSQNNTVYFD 382
Query: 289 GVVLEKQQCQRSFG-DDWLNAILEFCQSL---HLMEIDISAFACLCALT 333
G +S G +D+++ + EF +SL HL E +I+ F+ ++
Sbjct: 383 GKYASPDVF-KSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMS 430
Score = 81 (33.6 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 171 LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY 209
+T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +
Sbjct: 327 ITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVF 365
>UNIPROTKB|Q800Q2 [details] [associations]
symbol:ERalpha "Estrogen receptor alpha" species:48416
"Zoarces viviparus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000536 InterPro:IPR001292 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105 Pfam:PF02159
PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOVERGEN:HBG108344 GO:GO:0030284
HSSP:P03372 EMBL:AY223902 ProteinModelPortal:Q800Q2 SMR:Q800Q2
Uniprot:Q800Q2
Length = 570
Score = 177 (67.4 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 33/77 (42%), Positives = 44/77 (57%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 140 TRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDRNRRKSCQACR 199
Query: 100 XXXCLQVGMVKEVVRTD 116
C +VGM+K VR D
Sbjct: 200 LRKCYEVGMMKGGVRKD 216
Score = 112 (44.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 216 EPPI-AEPEKIQQFYS------LLTTSVDV-IRH---FADKIPGFSDLCKEDQELLFQSA 264
EPPI +K+ + Y+ LLT+ D + H +A K+PGF L DQ L +S+
Sbjct: 283 EPPILCSRQKLSRPYTEVTMMTLLTSMADKELVHMIAWAKKLPGFLQLGLHDQVQLLESS 342
Query: 265 SLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQ--CQRSFGDDWLNAILEFCQSLHLMEID 322
LE+ ++ L +R+ KLIF ++L++ + C + + + +L L+++
Sbjct: 343 WLEVLMIGLIWRSIHCPGKLIFAQDLILDRNEGDCVEGMAEIF-DMLLATTSRFRLLKLK 401
Query: 323 ISAFACLCALTLI 335
F CL A+ L+
Sbjct: 402 PEEFVCLKAIILL 414
Score = 61 (26.5 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 155 EPPI-AEPEKIQQFYS------LLTTSVDV-IRH---FADKIPGFSDLCKEDQELLFQSA 203
EPPI +K+ + Y+ LLT+ D + H +A K+PGF L DQ L +S+
Sbjct: 283 EPPILCSRQKLSRPYTEVTMMTLLTSMADKELVHMIAWAKKLPGFLQLGLHDQVQLLESS 342
Query: 204 SLEL 207
LE+
Sbjct: 343 WLEV 346
>UNIPROTKB|F1P5Z9 [details] [associations]
symbol:RORA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00700000104109 EMBL:AAEX03016182
Ensembl:ENSCAFT00000026448 Uniprot:F1P5Z9
Length = 458
Score = 164 (62.8 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C K C +D
Sbjct: 8 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQK 67
Query: 103 CLQVGMVKEVVR 114
CL VGM ++ V+
Sbjct: 68 CLAVGMSRDAVK 79
Score = 124 (48.7 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 43/169 (25%), Positives = 84/169 (49%)
Query: 172 TTSVDVIRHFADKIP-GFSDLCKEDQELLFQSASLELFYREPNPLEP-PIAEPEKIQQFY 229
T S+ + H A I + C+ +E L Q + + F +E +E + E + Q
Sbjct: 202 TVSMAELEHLAQNISKSHLETCQYLREEL-QQITWQTFLQEE--IESYQNKQREVMWQLC 258
Query: 230 SL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCN 288
++ +T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +R+ R ++ +
Sbjct: 259 AIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMC-RAFDSQNNTVYFD 317
Query: 289 GVVLEKQQCQRSFG-DDWLNAILEFCQSL---HLMEIDISAFACLCALT 333
G +S G +D+++ + EF +SL HL E +I+ F+ ++
Sbjct: 318 GKYASPDVF-KSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMS 365
Score = 81 (33.6 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 171 LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY 209
+T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +
Sbjct: 262 ITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVF 300
>RGD|628828 [details] [associations]
symbol:Nr1d2 "nuclear receptor subfamily 1, group D, member 2"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:628828 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOVERGEN:HBG106790 EMBL:X82777
EMBL:X78135 EMBL:U20796 IPI:IPI00209944 IPI:IPI00230783 PIR:S52913
UniGene:Rn.10055 ProteinModelPortal:Q63504 SMR:Q63504
PhosphoSite:Q63504 PRIDE:Q63504 Genevestigator:Q63504
Uniprot:Q63504
Length = 578
Score = 171 (65.3 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL ++ C +
Sbjct: 102 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRF 161
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 162 KKCLSVGMSRDAVR 175
Score = 119 (46.9 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 30/123 (24%), Positives = 59/123 (47%)
Query: 218 PIAEPEKI-----QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLR 272
P +P+K ++F T +V + FA +IPGF DL + DQ L ++ + E+ ++R
Sbjct: 389 PYVDPQKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVR 448
Query: 273 LAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCAL 332
A A++ + F +G D L+++ EF + L+ +++ + A+
Sbjct: 449 FASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLSSMFEFSEKLNGLQLSDEEMSLFTAV 508
Query: 333 TLI 335
L+
Sbjct: 509 VLV 511
Score = 78 (32.5 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 143 LITALYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQS 202
L+ + + P ++P + E ++F T +V + FA +IPGF DL + DQ L ++
Sbjct: 381 LVCPMSKSPY-VDPQKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKA 439
Query: 203 ASLEL 207
+ E+
Sbjct: 440 GTFEV 444
>UNIPROTKB|G3V9L8 [details] [associations]
symbol:Nr1d1 "Nuclear receptor subfamily 1 group D member
1" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010871 "negative
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0034144 "negative regulation of toll-like receptor 4 signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:628827 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:CH473948
GeneTree:ENSGT00700000104109 CTD:9572 KO:K03728 RefSeq:NP_665718.2
UniGene:Rn.29848 GeneID:252917 KEGG:rno:252917 NextBio:624049
Ensembl:ENSRNOT00000055333 Uniprot:G3V9L8
Length = 508
Score = 171 (65.3 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL ++ C +
Sbjct: 25 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRF 84
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 85 KKCLSVGMSRDAVR 98
Score = 117 (46.2 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 29/114 (25%), Positives = 56/114 (49%)
Query: 223 EKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAED 281
++I + +S+ T +V + FA IPGF DL + DQ L ++ + E+ ++R A +D
Sbjct: 327 QEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKD 386
Query: 282 TKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
++F + Q+ D LNA+ +F + L+ + + A+ L+
Sbjct: 387 QTVMFLSRTTYSLQELGAMGMGDLLNAMFDFSEKLNSLALTEEELGLFTAVVLV 440
Score = 70 (29.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 162 EKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
++I + +S+ T +V + FA IPGF DL + DQ L ++ + E+
Sbjct: 327 QEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEV 373
>UNIPROTKB|Q9YHZ7 [details] [associations]
symbol:esr1 "Estrogen receptor" species:7998 "Ictalurus
punctatus" [GO:0030284 "estrogen receptor activity" evidence=IDA]
[GO:0042562 "hormone binding" evidence=IDA] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0042562
GO:GO:0003700 GO:GO:0006351 HOVERGEN:HBG108344 GO:GO:0030284
EMBL:AF253505 EMBL:AF061275 EMBL:AF253506 RefSeq:NP_001187003.1
UniGene:Ipu.11209 ProteinModelPortal:Q9YHZ7 SMR:Q9YHZ7
GeneID:100304474 CTD:246870 Uniprot:Q9YHZ7
Length = 617
Score = 169 (64.5 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 35/83 (42%), Positives = 45/83 (54%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C+VC D A+ HYGV +CEGCK FFKR++Q + YVC A C +D
Sbjct: 187 CSVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYVCPATNQCTIDRNRRKSCQACRLRK 246
Query: 103 CLQVGMVKEVVRTDSLKGRRGRL 125
C +VGM+K R K R GR+
Sbjct: 247 CYEVGMMKGGFR----KERGGRI 265
Score = 122 (48.0 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 44/158 (27%), Positives = 73/158 (46%)
Query: 187 GFSDL-CKEDQELLFQSASLELFYREPNPL--EPPIAEPEKIQQFYSLLTTSVD-VIRH- 241
G +D+ C +++L L L EP L + P SLLT D + H
Sbjct: 308 GVADVVCMSPEQVL-----LLLLRAEPPTLCSRQKHSRPYSELTIMSLLTNMADRELVHM 362
Query: 242 --FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQ--C 297
+A K+PGF DL DQ L +S+ LE+ ++ L +R+ KLIF ++L+K + C
Sbjct: 363 IAWAKKVPGFQDLSLHDQVQLLESSWLEILMIGLIWRSIYTPGKLIFAQDLILDKSEGEC 422
Query: 298 QRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ + + +L +++ F CL A+ L+
Sbjct: 423 VEGMAEIF-DMLLATVARFRTLKLKSEEFVCLKAIILL 459
Score = 70 (29.7 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 25/71 (35%), Positives = 33/71 (46%)
Query: 143 LITALYREPNPL--EPPIAEPEKIQQFYSLLTTSVD-VIRH---FADKIPGFSDLCKEDQ 196
L+ L EP L + P SLLT D + H +A K+PGF DL DQ
Sbjct: 321 LLLLLRAEPPTLCSRQKHSRPYSELTIMSLLTNMADRELVHMIAWAKKVPGFQDLSLHDQ 380
Query: 197 ELLFQSASLEL 207
L +S+ LE+
Sbjct: 381 VQLLESSWLEI 391
>UNIPROTKB|F1MWI2 [details] [associations]
symbol:NR1D2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00700000104109 OMA:MMNSQFS EMBL:DAAA02061153
EMBL:DAAA02061154 IPI:IPI00694618 Ensembl:ENSBTAT00000023994
Uniprot:F1MWI2
Length = 583
Score = 165 (63.1 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 30/73 (41%), Positives = 43/73 (58%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL ++ C +
Sbjct: 102 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRF 161
Query: 101 XXCLQVGMVKEVV 113
CL VGM ++ +
Sbjct: 162 KKCLSVGMSRDAI 174
Score = 126 (49.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 38/152 (25%), Positives = 69/152 (45%)
Query: 185 IPGFSDLCKEDQELLFQSASLELFY-REPNPLEPPIAEPEKIQQFYSL-LTTSVDVIRHF 242
I GFS ++ L A + L +P P +I + +S+ T +V + F
Sbjct: 361 IDGFSQNENKNGFLCNTGARMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEF 420
Query: 243 ADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFG 302
A +IPGF DL + DQ L ++ + E+ ++R A A++ + F +G
Sbjct: 421 AKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGA 480
Query: 303 DDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
D LN++ EF + L+ +++ + A+ L
Sbjct: 481 GDLLNSMFEFSEKLNALQLSDEEMSLFTAVVL 512
Score = 77 (32.2 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 143 LITALYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQS 202
L+ + + P ++P + E ++F T +V + FA +IPGF DL + DQ L ++
Sbjct: 383 LVCPMSKSPY-VDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKA 441
Query: 203 ASLEL 207
+ E+
Sbjct: 442 GTFEV 446
>UNIPROTKB|F1NML9 [details] [associations]
symbol:RORA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006809 "nitric oxide
biosynthetic process" evidence=IEA] [GO:0021702 "cerebellar
Purkinje cell differentiation" evidence=IEA] [GO:0043030
"regulation of macrophage activation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046068 "cGMP metabolic process"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0030522 GO:GO:0006809 GO:GO:0046068 GO:GO:0043030
GeneTree:ENSGT00700000104109 OMA:VAAQIEI EMBL:AADN02040416
IPI:IPI00581652 Ensembl:ENSGALT00000005967 Uniprot:F1NML9
Length = 469
Score = 164 (62.8 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C K C +D
Sbjct: 18 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQK 77
Query: 103 CLQVGMVKEVVR 114
CL VGM ++ V+
Sbjct: 78 CLAVGMSRDAVK 89
Score = 124 (48.7 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 42/169 (24%), Positives = 84/169 (49%)
Query: 172 TTSVDVIRHFADKIP-GFSDLCKEDQELLFQSASLELFYREPNPLEP-PIAEPEKIQQFY 229
T S+ + H A I + C+ +E L Q + + F +E +E + E + Q
Sbjct: 212 TVSMAELEHLAQNISKSHMETCQYLREEL-QQITWQTFLQEE--IENYQNKQREVMWQLC 268
Query: 230 SL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCN 288
++ +T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +R+ R ++ +
Sbjct: 269 AVKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMC-RAFDSQNNTVYFD 327
Query: 289 GVVLEKQQCQRSFG-DDWLNAILEFCQSL---HLMEIDISAFACLCALT 333
G + + G +D+++ + EF +SL HL E +I+ F+ ++
Sbjct: 328 GKYASPEVFKSLAGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMS 376
Score = 81 (33.6 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 171 LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY 209
+T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +
Sbjct: 272 ITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVF 310
>UNIPROTKB|F1P607 [details] [associations]
symbol:RORA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00700000104109 OMA:VAAQIEI
EMBL:AAEX03016182 Ensembl:ENSCAFT00000026445 Uniprot:F1P607
Length = 487
Score = 164 (62.8 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C K C +D
Sbjct: 17 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQK 76
Query: 103 CLQVGMVKEVVR 114
CL VGM ++ V+
Sbjct: 77 CLAVGMSRDAVK 88
Score = 124 (48.7 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 43/169 (25%), Positives = 84/169 (49%)
Query: 172 TTSVDVIRHFADKIP-GFSDLCKEDQELLFQSASLELFYREPNPLEP-PIAEPEKIQQFY 229
T S+ + H A I + C+ +E L Q + + F +E +E + E + Q
Sbjct: 211 TVSMAELEHLAQNISKSHLETCQYLREEL-QQITWQTFLQEE--IESYQNKQREVMWQLC 267
Query: 230 SL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCN 288
++ +T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +R+ R ++ +
Sbjct: 268 AIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMC-RAFDSQNNTVYFD 326
Query: 289 GVVLEKQQCQRSFG-DDWLNAILEFCQSL---HLMEIDISAFACLCALT 333
G +S G +D+++ + EF +SL HL E +I+ F+ ++
Sbjct: 327 GKYASPDVF-KSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMS 374
Score = 81 (33.6 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 171 LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY 209
+T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +
Sbjct: 271 ITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVF 309
>UNIPROTKB|F1LZZ3 [details] [associations]
symbol:Rora "Protein Rora" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:1308419 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0030522 GO:GO:0006809 GO:GO:0021702 GO:GO:0046068
GO:GO:0043030 GeneTree:ENSGT00700000104109 IPI:IPI00373337
Ensembl:ENSRNOT00000013142 ArrayExpress:F1LZZ3 Uniprot:F1LZZ3
Length = 457
Score = 164 (62.8 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C K C +D
Sbjct: 7 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQK 66
Query: 103 CLQVGMVKEVVR 114
CL VGM ++ V+
Sbjct: 67 CLAVGMSRDAVK 78
Score = 123 (48.4 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 43/169 (25%), Positives = 84/169 (49%)
Query: 172 TTSVDVIRHFADKIP-GFSDLCKEDQELLFQSASLELFYREPNPLEP-PIAEPEKIQQFY 229
T S+ + H A I + C+ +E L Q + + F +E +E + E + Q
Sbjct: 201 TVSMAELEHLAQNISKSHLETCQYLREEL-QQITWQTFLQEE--IENYQNKQREVMWQLC 257
Query: 230 SL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCN 288
++ +T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +R+ R ++ +
Sbjct: 258 AIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMC-RAFDSQNNTVYFD 316
Query: 289 GVVLEKQQCQRSFG-DDWLNAILEFCQSL---HLMEIDISAFACLCALT 333
G +S G +D+++ + EF +SL HL E +I+ F+ ++
Sbjct: 317 GKYASPDVF-KSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMS 364
Score = 81 (33.6 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 171 LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY 209
+T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +
Sbjct: 261 ITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVF 299
>ZFIN|ZDB-GENE-990415-263 [details] [associations]
symbol:thraa "thyroid hormone receptor alpha a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004887 "thyroid hormone receptor activity" evidence=IEA;IDA]
[GO:0009725 "response to hormone stimulus" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000988 "protein
binding transcription factor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-990415-263 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0009725 GO:GO:0004887 GO:GO:0000988
EMBL:AL590145 GeneTree:ENSGT00680000099662 IPI:IPI00931420
ProteinModelPortal:F1Q735 Ensembl:ENSDART00000112817
ArrayExpress:F1Q735 Bgee:F1Q735 Uniprot:F1Q735
Length = 466
Score = 170 (64.9 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 35/85 (41%), Positives = 43/85 (50%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXXXXXXXXXXX 100
C VCGD A HY TCEGCKGFF+RT+QK Y C D C +D
Sbjct: 51 CVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDSCCIIDKITRNQCQLCRF 110
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + RL
Sbjct: 111 RKCISVGMAMDLVLDDSKRVAKRRL 135
Score = 116 (45.9 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+ LR A R E
Sbjct: 210 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESE 269
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + + ++Q + +AI + +SL +D S A L A+ L+
Sbjct: 270 TLTLSGEMAVSREQLKNGGLGVVSDAIFDLGKSLSQFNLDDSEVALLQAVLLM 322
Score = 75 (31.5 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+
Sbjct: 210 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEI 255
>UNIPROTKB|F1NBB5 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 OMA:RMSSKDR EMBL:AADN02012104
EMBL:AADN02012105 EMBL:AADN02012106 EMBL:AADN02012107
IPI:IPI00579920 ProteinModelPortal:F1NBB5
Ensembl:ENSGALT00000016889 ArrayExpress:F1NBB5 Uniprot:F1NBB5
Length = 393
Score = 226 (84.6 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 67/190 (35%), Positives = 86/190 (45%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 56 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 115
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRG----RLXXXXXXXXXXXXXXXXXLITALYREPNPL 154
CL+VGM+KE VR D ++G R R+ A++ + +
Sbjct: 116 RFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPWAIFTDNKIV 175
Query: 155 EPP-IAEPEKIQQF---------YSLLTTSVD-------VIRHFADKIPGFSDLCKEDQE 197
+AEPEKI LTT D VI +A IPGFS L DQ
Sbjct: 176 SHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQM 235
Query: 198 LLFQSASLEL 207
L QSA +E+
Sbjct: 236 SLLQSAWMEI 245
Score = 141 (54.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 38/132 (28%), Positives = 67/132 (50%)
Query: 203 ASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQ 262
A E Y P+P P ++ + + L + VI +A IPGFS L DQ L Q
Sbjct: 181 AEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQ 239
Query: 263 SASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEID 322
SA +E+ +L + YR+ + + +L++ ++++ Q + + D NAIL+ + M+++
Sbjct: 240 SAWMEILILGVVYRSLSFEDELVYAEDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLE 299
Query: 323 ISAFACLCALTL 334
F L A+ L
Sbjct: 300 KEEFVTLKAIAL 311
>RGD|1308419 [details] [associations]
symbol:Rora "RAR-related orphan receptor A" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006809 "nitric oxide biosynthetic process"
evidence=ISO] [GO:0007623 "circadian rhythm" evidence=IEP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=ISO]
[GO:0043030 "regulation of macrophage activation" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046068 "cGMP metabolic
process" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:1308419 GO:GO:0005634 GO:GO:0046872
GO:GO:0007623 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0030522 GO:GO:0006809 GO:GO:0021702
GO:GO:0046068 GO:GO:0043030 IPI:IPI00780466
Ensembl:ENSRNOT00000057506 UCSC:RGD:1308419 ArrayExpress:F1M505
Uniprot:F1M505
Length = 466
Score = 164 (62.8 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C K C +D
Sbjct: 16 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQK 75
Query: 103 CLQVGMVKEVVR 114
CL VGM ++ V+
Sbjct: 76 CLAVGMSRDAVK 87
Score = 123 (48.4 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 43/169 (25%), Positives = 84/169 (49%)
Query: 172 TTSVDVIRHFADKIP-GFSDLCKEDQELLFQSASLELFYREPNPLEP-PIAEPEKIQQFY 229
T S+ + H A I + C+ +E L Q + + F +E +E + E + Q
Sbjct: 210 TVSMAELEHLAQNISKSHLETCQYLREEL-QQITWQTFLQEE--IENYQNKQREVMWQLC 266
Query: 230 SL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCN 288
++ +T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +R+ R ++ +
Sbjct: 267 AIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMC-RAFDSQNNTVYFD 325
Query: 289 GVVLEKQQCQRSFG-DDWLNAILEFCQSL---HLMEIDISAFACLCALT 333
G +S G +D+++ + EF +SL HL E +I+ F+ ++
Sbjct: 326 GKYASPDVF-KSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMS 373
Score = 81 (33.6 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 171 LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY 209
+T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +
Sbjct: 270 ITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVF 308
>UNIPROTKB|F8W8J3 [details] [associations]
symbol:ESRRG "Estrogen-related receptor gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:AL445650 EMBL:AL512650 EMBL:AC096635 EMBL:AC096634
EMBL:AL391216 EMBL:AL512626 EMBL:AL513312 EMBL:AL603752
IPI:IPI00554597 RefSeq:NP_001230447.1 UniGene:Hs.444225
UniGene:Hs.738938 DNASU:2104 GeneID:2104 KEGG:hsa:2104 CTD:2104
HGNC:HGNC:3474 KO:K08554 ChiTaRS:ESRRG GenomeRNAi:2104 NextBio:8511
GO:GO:0003708 OMA:RMSSKDR ProteinModelPortal:F8W8J3 SMR:F8W8J3
Ensembl:ENST00000366937 UCSC:uc001hkx.2 ArrayExpress:F8W8J3
Bgee:F8W8J3 Uniprot:F8W8J3
Length = 470
Score = 228 (85.3 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 70/194 (36%), Positives = 88/194 (45%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 129 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 188
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITA-----LYREP-- 151
CL+VGM+KE VR D ++G GR L+ L+ +P
Sbjct: 189 RFMKCLKVGMLKEGVRLDRVRG--GRQKYKRRIDAENSPYLNPQLVQPAKKPLLWSDPAD 246
Query: 152 NPLEPP--IAEPEKIQQF---------YSLLTTSVD-------VIRHFADKIPGFSDLCK 193
N + +AEPEKI LTT D VI +A IPGFS L
Sbjct: 247 NKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSL 306
Query: 194 EDQELLFQSASLEL 207
DQ L QSA +E+
Sbjct: 307 ADQMSLLQSAWMEI 320
Score = 142 (55.0 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 203 ASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQ 262
A E Y P+P P ++ + + L + VI +A IPGFS L DQ L Q
Sbjct: 256 AEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQ 314
Query: 263 SASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEID 322
SA +E+ +L + YR+ + + +L++ + ++++ Q + + D NAIL+ + M+++
Sbjct: 315 SAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLE 374
Query: 323 ISAFACLCALTL 334
F L A+ L
Sbjct: 375 KEEFVTLKAIAL 386
>ZFIN|ZDB-GENE-040724-215 [details] [associations]
symbol:rorcb "RAR-related orphan receptor C b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040724-215 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000010200 HOVERGEN:HBG106848 EMBL:DQ017628
IPI:IPI00498218 UniGene:Dr.12904 InParanoid:Q1L678 Uniprot:Q1L678
Length = 480
Score = 161 (61.7 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C + C +D
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRNRCQHCRLQK 69
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ VR
Sbjct: 70 CLALGMSRDAVR 81
Score = 126 (49.4 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 30/110 (27%), Positives = 54/110 (49%)
Query: 226 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLI 285
QQ +T ++ + FA +I GF +LC+ DQ +L ++ LE+ ++R+ R +
Sbjct: 279 QQCALQITNAIQYVVEFAKRISGFMELCQNDQIILLKAGCLEVLLIRMC-RAYNSSNNTM 337
Query: 286 FCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
F +G Q + DD +NA+ E +SL +++ A A L+
Sbjct: 338 FFDGKFASPQLFKALGCDDLVNAVFELAKSLSRLQLSEEEMALYSAAVLL 387
Score = 78 (32.5 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 165 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
QQ +T ++ + FA +I GF +LC+ DQ +L ++ LE+
Sbjct: 279 QQCALQITNAIQYVVEFAKRISGFMELCQNDQIILLKAGCLEV 321
>UNIPROTKB|E2R4U0 [details] [associations]
symbol:NR1D1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0034144 "negative
regulation of toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0010871 "negative regulation of receptor biosynthetic process"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0007623 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0071222 GO:GO:0000122
GO:GO:0044212 GO:GO:0000790 GeneTree:ENSGT00700000104109
GO:GO:0034144 CTD:9572 KO:K03728 OMA:SCHQPNS GO:GO:0010871
EMBL:AAEX03006466 RefSeq:XP_003435298.1 ProteinModelPortal:E2R4U0
Ensembl:ENSCAFT00000025626 GeneID:100688236 KEGG:cfa:100688236
Uniprot:E2R4U0
Length = 612
Score = 171 (65.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL ++ C +
Sbjct: 129 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRF 188
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 189 KKCLSVGMSRDAVR 202
Score = 117 (46.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 29/114 (25%), Positives = 56/114 (49%)
Query: 223 EKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAED 281
++I + +S+ T +V + FA IPGF DL + DQ L ++ + E+ ++R A +D
Sbjct: 431 QEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKD 490
Query: 282 TKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
++F + Q+ D LNA+ +F + L+ + + A+ L+
Sbjct: 491 QTVMFLSRTTYSLQELGAMGMGDLLNAMFDFSEKLNSLALTEEELGLFTAVVLV 544
Score = 70 (29.7 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 162 EKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
++I + +S+ T +V + FA IPGF DL + DQ L ++ + E+
Sbjct: 431 QEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEV 477
>UNIPROTKB|Q08E02 [details] [associations]
symbol:NR1D1 "Nuclear receptor subfamily 1 group D member
1" species:9913 "Bos taurus" [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0034144 "negative
regulation of toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0010871 "negative regulation of receptor biosynthetic process"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0007623 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0071222 GO:GO:0000122
GO:GO:0044212 GO:GO:0000790 eggNOG:NOG324222
GeneTree:ENSGT00700000104109 GO:GO:0034144 EMBL:BC123488
IPI:IPI00716259 RefSeq:NP_001071568.1 UniGene:Bt.65340
ProteinModelPortal:Q08E02 SMR:Q08E02 STRING:Q08E02 PRIDE:Q08E02
Ensembl:ENSBTAT00000016154 GeneID:768225 KEGG:bta:768225 CTD:9572
HOGENOM:HOG000261691 InParanoid:Q08E02 KO:K03728 OMA:SCHQPNS
OrthoDB:EOG4DV5KZ NextBio:20918523 GO:GO:0010871 Uniprot:Q08E02
Length = 613
Score = 171 (65.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL ++ C +
Sbjct: 132 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRF 191
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 192 KKCLSVGMSRDAVR 205
Score = 117 (46.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 29/114 (25%), Positives = 56/114 (49%)
Query: 223 EKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAED 281
++I + +S+ T +V + FA IPGF DL + DQ L ++ + E+ ++R A +D
Sbjct: 432 QEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKD 491
Query: 282 TKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
++F + Q+ D LNA+ +F + L+ + + A+ L+
Sbjct: 492 QTVMFLSRTTYSLQELGAMGMGDLLNAMFDFSEKLNSLALTEEELGLFTAVVLV 545
Score = 70 (29.7 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 162 EKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
++I + +S+ T +V + FA IPGF DL + DQ L ++ + E+
Sbjct: 432 QEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEV 478
>UNIPROTKB|G3V770 [details] [associations]
symbol:Nr1d1 "Nuclear receptor subfamily 1 group D member
1" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010871 "negative
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0034144 "negative regulation of toll-like receptor 4 signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:628827 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:CH473948
GeneTree:ENSGT00700000104109 OMA:SCHQPNS UniGene:Rn.29848
Ensembl:ENSRNOT00000012537 Uniprot:G3V770
Length = 614
Score = 171 (65.3 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL ++ C +
Sbjct: 131 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRF 190
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 191 KKCLSVGMSRDAVR 204
Score = 117 (46.2 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 29/114 (25%), Positives = 56/114 (49%)
Query: 223 EKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAED 281
++I + +S+ T +V + FA IPGF DL + DQ L ++ + E+ ++R A +D
Sbjct: 433 QEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKD 492
Query: 282 TKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
++F + Q+ D LNA+ +F + L+ + + A+ L+
Sbjct: 493 QTVMFLSRTTYSLQELGAMGMGDLLNAMFDFSEKLNSLALTEEELGLFTAVVLV 546
Score = 70 (29.7 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 162 EKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
++I + +S+ T +V + FA IPGF DL + DQ L ++ + E+
Sbjct: 433 QEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEV 479
>MGI|MGI:2444210 [details] [associations]
symbol:Nr1d1 "nuclear receptor subfamily 1, group D, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010871 "negative regulation of receptor biosynthetic process"
evidence=ISO] [GO:0034144 "negative regulation of toll-like
receptor 4 signaling pathway" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:2444210 GO:GO:0005654 GO:GO:0046872
GO:GO:0003677 GO:GO:0007623 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0071222 GO:GO:0000122
GO:GO:0044212 GO:GO:0000790 Reactome:REACT_109335
Reactome:REACT_24972 EMBL:AL590963 eggNOG:NOG324222 HSSP:P03372
GeneTree:ENSGT00700000104109 GO:GO:0034144 CTD:9572
HOGENOM:HOG000261691 KO:K03728 OMA:SCHQPNS OrthoDB:EOG4DV5KZ
GO:GO:0010871 HOVERGEN:HBG106790 EMBL:AK137398 EMBL:AK137582
EMBL:AK146430 EMBL:AK154931 EMBL:AK155597 EMBL:BC008989
EMBL:AF291821 EMBL:X86010 EMBL:AY336125 IPI:IPI00122690 PIR:S52813
RefSeq:NP_663409.2 UniGene:Mm.390397 ProteinModelPortal:Q3UV55
SMR:Q3UV55 DIP:DIP-59440N STRING:Q3UV55 PhosphoSite:Q3UV55
PRIDE:Q3UV55 Ensembl:ENSMUST00000064941 GeneID:217166
KEGG:mmu:217166 UCSC:uc007lhh.1 InParanoid:Q3UV55 NextBio:375617
Bgee:Q3UV55 CleanEx:MM_NR1D1 Genevestigator:Q3UV55 Uniprot:Q3UV55
Length = 615
Score = 171 (65.3 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL ++ C +
Sbjct: 132 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRF 191
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 192 KKCLSVGMSRDAVR 205
Score = 117 (46.2 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 29/114 (25%), Positives = 56/114 (49%)
Query: 223 EKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAED 281
++I + +S+ T +V + FA IPGF DL + DQ L ++ + E+ ++R A +D
Sbjct: 434 QEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKD 493
Query: 282 TKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
++F + Q+ D LNA+ +F + L+ + + A+ L+
Sbjct: 494 QTVMFLSRTTYSLQELGAMGMGDLLNAMFDFSEKLNSLALTEEELGLFTAVVLV 547
Score = 70 (29.7 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 162 EKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
++I + +S+ T +V + FA IPGF DL + DQ L ++ + E+
Sbjct: 434 QEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEV 480
>RGD|628827 [details] [associations]
symbol:Nr1d1 "nuclear receptor subfamily 1, group D, member 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0007623 "circadian
rhythm" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010871 "negative regulation of receptor biosynthetic process"
evidence=ISO] [GO:0034144 "negative regulation of toll-like
receptor 4 signaling pathway" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=ISO]
[GO:2000189 "positive regulation of cholesterol homeostasis"
evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:628827 GO:GO:0046872 GO:GO:0007623 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0071222 GO:GO:0000122
GO:GO:0044212 GO:GO:0000790 eggNOG:NOG324222 GO:GO:0034144 CTD:9572
HOGENOM:HOG000261691 KO:K03728 OrthoDB:EOG4DV5KZ GO:GO:0010871
HOVERGEN:HBG106790 EMBL:BC062047 EMBL:M25804 IPI:IPI00421519
PIR:A30226 RefSeq:NP_001106893.1 RefSeq:NP_665718.2
UniGene:Rn.29848 ProteinModelPortal:Q63503 SMR:Q63503 STRING:Q63503
GeneID:252917 KEGG:rno:252917 UCSC:RGD:628827 InParanoid:Q63503
NextBio:624049 Genevestigator:Q63503 GermOnline:ENSRNOG00000009329
Uniprot:Q63503
Length = 615
Score = 171 (65.3 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL ++ C +
Sbjct: 132 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRF 191
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 192 KKCLSVGMSRDAVR 205
Score = 117 (46.2 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 29/114 (25%), Positives = 56/114 (49%)
Query: 223 EKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAED 281
++I + +S+ T +V + FA IPGF DL + DQ L ++ + E+ ++R A +D
Sbjct: 434 QEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKD 493
Query: 282 TKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
++F + Q+ D LNA+ +F + L+ + + A+ L+
Sbjct: 494 QTVMFLSRTTYSLQELGAMGMGDLLNAMFDFSEKLNSLALTEEELGLFTAVVLV 547
Score = 70 (29.7 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 162 EKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
++I + +S+ T +V + FA IPGF DL + DQ L ++ + E+
Sbjct: 434 QEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEV 480
>UNIPROTKB|K7GQM0 [details] [associations]
symbol:RXRB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GeneTree:ENSGT00690000101777
EMBL:CT737383 Ensembl:ENSSSCT00000035096 Uniprot:K7GQM0
Length = 388
Score = 197 (74.4 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 34 PTPPSPS---QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
P P P +LCA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C VD
Sbjct: 96 PPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKR 155
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGR 121
CL GM +E V+ + +G+
Sbjct: 156 QRNRCQYCRYQKCLATGMKREAVQEERQRGK 186
Score = 74 (31.1 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS- 300
+A +IP FS L +DQ +L ++ EL + ++R+ ++ G+ + + +
Sbjct: 256 WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAG 315
Query: 301 FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
G + + E + M +D + CL A+ L
Sbjct: 316 VGAIFDRVLTELVSKMRDMRMDKTELGCLRAIIL 349
Score = 46 (21.3 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A +IP FS L +DQ +L ++ EL
Sbjct: 256 WAKRIPHFSSLPLDDQVILLRAGWNEL 282
>UNIPROTKB|F8VZR5 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AL662824
EMBL:AL844527 EMBL:CR759733 EMBL:CR936877 EMBL:CR354565
HGNC:HGNC:10478 ChiTaRS:RXRB IPI:IPI01022583 SMR:F8VZR5
Ensembl:ENST00000546472 Ensembl:ENST00000548862
Ensembl:ENST00000549199 Ensembl:ENST00000552454
Ensembl:ENST00000552822 Uniprot:F8VZR5
Length = 389
Score = 197 (74.4 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 34 PTPPSPS---QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
P P P +LCA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C VD
Sbjct: 54 PPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKR 113
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGR 121
CL GM +E V+ + +G+
Sbjct: 114 QRNRCQYCRYQKCLATGMKREAVQEERQRGK 144
Score = 74 (31.1 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS- 300
+A +IP FS L +DQ +L ++ EL + ++R+ ++ G+ + + +
Sbjct: 209 WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAG 268
Query: 301 FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
G + + E + M +D + CL A+ L
Sbjct: 269 VGAIFDRVLTELVSKMRDMRMDKTELGCLRAIIL 302
Score = 46 (21.3 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A +IP FS L +DQ +L ++ EL
Sbjct: 209 WAKRIPHFSSLPLDDQVILLRAGWNEL 235
>UNIPROTKB|F8VNP5 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AL662824 EMBL:AL844527 EMBL:CR759733
EMBL:CR936877 EMBL:CR354565 HGNC:HGNC:10478 ChiTaRS:RXRB
IPI:IPI01020693 SMR:F8VNP5 Ensembl:ENST00000546468
Ensembl:ENST00000547763 Ensembl:ENST00000549662
Ensembl:ENST00000550626 Ensembl:ENST00000550731 Uniprot:F8VNP5
Length = 392
Score = 197 (74.4 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 34 PTPPSPS---QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
P P P +LCA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C VD
Sbjct: 54 PPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKR 113
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGR 121
CL GM +E V+ + +G+
Sbjct: 114 QRNRCQYCRYQKCLATGMKREAVQEERQRGK 144
Score = 74 (31.1 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS- 300
+A +IP FS L +DQ +L ++ EL + ++R+ ++ G+ + + +
Sbjct: 212 WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAG 271
Query: 301 FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
G + + E + M +D + CL A+ L
Sbjct: 272 VGAIFDRVLTELVSKMRDMRMDKTELGCLRAIIL 305
Score = 46 (21.3 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A +IP FS L +DQ +L ++ EL
Sbjct: 212 WAKRIPHFSSLPLDDQVILLRAGWNEL 238
>UNIPROTKB|P10827 [details] [associations]
symbol:THRA "Thyroid hormone receptor alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0001503
"ossification" evidence=IEA] [GO:0002153 "steroid receptor RNA
activator RNA binding" evidence=IEA] [GO:0002155 "regulation of
thyroid hormone mediated signaling pathway" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008016
"regulation of heart contraction" evidence=IEA] [GO:0008050 "female
courtship behavior" evidence=IEA] [GO:0009409 "response to cold"
evidence=IEA] [GO:0010831 "positive regulation of myotube
differentiation" evidence=IEA] [GO:0030218 "erythrocyte
differentiation" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033032 "regulation of myeloid cell apoptotic process"
evidence=IEA] [GO:0042994 "cytoplasmic sequestering of
transcription factor" evidence=IEA] [GO:0045925 "positive
regulation of female receptivity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0050994 "regulation of lipid catabolic
process" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0017055 "negative regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IDA]
[GO:2000143 "negative regulation of DNA-dependent transcription,
initiation" evidence=IDA] [GO:0070324 "thyroid hormone binding"
evidence=IDA;IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0004887 "thyroid hormone receptor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0017025 "TBP-class protein binding"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0009755 "hormone-mediated signaling pathway" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IDA] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR001728 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005829 GO:GO:0005654 GO:GO:0046872
EMBL:CH471152 GO:GO:0009409 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0008016 Pathway_Interaction_DB:rxr_vdr_pathway
GO:GO:0007611 GO:GO:0044212 GO:GO:0030218 GO:GO:0009755
GO:GO:0070324 DrugBank:DB00451 DrugBank:DB00279 GO:GO:0001502
GO:GO:0006367 GO:GO:0001503 GO:GO:0031490 GO:GO:2000143
GO:GO:0050994 GO:GO:0004887 GO:GO:0042994 GO:GO:0017025
GO:GO:0010831 HOVERGEN:HBG005606 GO:GO:0030878 GO:GO:0002155
GO:GO:0017055 GO:GO:0045925 EMBL:M24900 EMBL:X55066 UniGene:Hs.724
GO:GO:0008050 GO:GO:0033032 CTD:7067 KO:K05547 EMBL:X55074
EMBL:X55073 EMBL:X55070 EMBL:X55071 EMBL:X55004 EMBL:X55069
EMBL:X55068 EMBL:X55005 EMBL:M24899 EMBL:J03239 EMBL:Y00479
EMBL:M24748 EMBL:AK290530 EMBL:BC000261 EMBL:BC002728 EMBL:BC035137
EMBL:AF522368 IPI:IPI00022991 IPI:IPI00219099 IPI:IPI00219100
IPI:IPI00219101 PIR:A30893 PIR:A40917 PIR:S06163
RefSeq:NP_001177847.1 RefSeq:NP_001177848.1 RefSeq:NP_003241.2
RefSeq:NP_955366.1 PDB:1NAV PDB:2H77 PDB:2H79 PDB:3HZF PDB:3ILZ
PDB:3JZB PDBsum:1NAV PDBsum:2H77 PDBsum:2H79 PDBsum:3HZF
PDBsum:3ILZ PDBsum:3JZB ProteinModelPortal:P10827 SMR:P10827
IntAct:P10827 STRING:P10827 PhosphoSite:P10827 DMDM:135705
PaxDb:P10827 PRIDE:P10827 DNASU:7067 Ensembl:ENST00000264637
Ensembl:ENST00000394121 Ensembl:ENST00000450525
Ensembl:ENST00000546243 Ensembl:ENST00000584985 GeneID:7067
KEGG:hsa:7067 UCSC:uc002htw.3 UCSC:uc002htx.3 GeneCards:GC17P038219
HGNC:HGNC:11796 HPA:CAB023349 HPA:HPA009654 MIM:190120 MIM:614450
neXtProt:NX_P10827 Orphanet:97927 PharmGKB:PA36507 eggNOG:NOG272726
HOGENOM:HOG000010313 InParanoid:P10827 OMA:DEEPEVC
OrthoDB:EOG4B2SX0 PhylomeDB:P10827 BindingDB:P10827
ChEMBL:CHEMBL1860 ChiTaRS:THRA EvolutionaryTrace:P10827
GenomeRNAi:7067 NextBio:27631 ArrayExpress:P10827 Bgee:P10827
CleanEx:HS_THRA Genevestigator:P10827 GermOnline:ENSG00000126351
GO:GO:0002153 Uniprot:P10827
Length = 490
Score = 167 (63.8 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 35/94 (37%), Positives = 46/94 (48%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXX 91
P+ + C VCGD A HY TCEGCKGFF+RT+QK Y C D C +D
Sbjct: 44 PSYLDKDEQCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKIT 103
Query: 92 XXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + +L
Sbjct: 104 RNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRKL 137
Score = 118 (46.6 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+ LR A R E
Sbjct: 213 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESD 272
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + ++++Q + +AI E +SL +D + A L A+ L+
Sbjct: 273 TLTLSGEMAVKREQLKNGGLGVVSDAIFELGKSLSAFNLDDTEVALLQAVLLM 325
Score = 75 (31.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+
Sbjct: 213 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEI 258
>MGI|MGI:98742 [details] [associations]
symbol:Thra "thyroid hormone receptor alpha" species:10090
"Mus musculus" [GO:0001071 "nucleic acid binding transcription
factor activity" evidence=ISO] [GO:0001502 "cartilage condensation"
evidence=IMP] [GO:0001503 "ossification" evidence=IMP] [GO:0002153
"steroid receptor RNA activator RNA binding" evidence=IDA]
[GO:0002155 "regulation of thyroid hormone mediated signaling
pathway" evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=ISO;IDA] [GO:0004879 "ligand-activated sequence-specific
DNA binding RNA polymerase II transcription factor activity"
evidence=IDA] [GO:0004887 "thyroid hormone receptor activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0007611 "learning or memory" evidence=IMP]
[GO:0008016 "regulation of heart contraction" evidence=IMP]
[GO:0008050 "female courtship behavior" evidence=IMP] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009409 "response to cold" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=ISO]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0010831
"positive regulation of myotube differentiation" evidence=IDA]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017055
"negative regulation of RNA polymerase II transcriptional
preinitiation complex assembly" evidence=ISO] [GO:0019904 "protein
domain specific binding" evidence=ISO] [GO:0030218 "erythrocyte
differentiation" evidence=IMP] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=ISO;IDA;TAS] [GO:0030878
"thyroid gland development" evidence=IGI] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0033032 "regulation of myeloid cell apoptotic
process" evidence=IMP] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0042994 "cytoplasmic sequestering of
transcription factor" evidence=IDA] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0044213 "intronic transcription
regulatory region DNA binding" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045925 "positive regulation of female receptivity"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=ISO] [GO:0050994 "regulation of
lipid catabolic process" evidence=IMP] [GO:0070324 "thyroid hormone
binding" evidence=ISO] [GO:2000143 "negative regulation of
DNA-dependent transcription, initiation" evidence=ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR001728 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:98742 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0032403 GO:GO:0046872
GO:GO:0009409 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0008016 GO:GO:0007611 EMBL:CH466556 GO:GO:0044212
GO:GO:0030218 GO:GO:0070324 GO:GO:0001502 GO:GO:0001503
GO:GO:0031490 GO:GO:2000143 GO:GO:0050994 GO:GO:0004887
GO:GO:0042994 EMBL:AL590963 GO:GO:0010831 HOVERGEN:HBG005606
GO:GO:0030878 GO:GO:0002155 GO:GO:0017055 GO:GO:0045925
GO:GO:0008050 GO:GO:0033032 GeneTree:ENSGT00680000099662 CTD:7067
KO:K05547 eggNOG:NOG272726 OMA:DEEPEVC OrthoDB:EOG4B2SX0
GO:GO:0002153 EMBL:X07750 EMBL:X07751 EMBL:X07752 EMBL:X51983
EMBL:AK078233 EMBL:BC046795 IPI:IPI00134812 IPI:IPI00229975
IPI:IPI00229976 IPI:IPI00955166 PIR:S14416 PIR:S14417 PIR:S14418
PIR:S14690 RefSeq:NP_835161.1 UniGene:Mm.265917 UniGene:Mm.442648
ProteinModelPortal:P63058 SMR:P63058 DIP:DIP-43752N
MINT:MINT-3374329 STRING:P63058 PhosphoSite:P63058 PRIDE:P63058
Ensembl:ENSMUST00000064187 Ensembl:ENSMUST00000103139
Ensembl:ENSMUST00000124072 GeneID:21833 KEGG:mmu:21833
UCSC:uc007lhe.1 UCSC:uc007lhf.1 UCSC:uc007lhg.1 InParanoid:Q80Y90
NextBio:301282 Bgee:P63058 CleanEx:MM_THRA Genevestigator:P63058
GermOnline:ENSMUSG00000058756 Uniprot:P63058
Length = 492
Score = 167 (63.8 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 35/94 (37%), Positives = 46/94 (48%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXX 91
P+ + C VCGD A HY TCEGCKGFF+RT+QK Y C D C +D
Sbjct: 44 PSYLDKDEQCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKIT 103
Query: 92 XXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + +L
Sbjct: 104 RNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRKL 137
Score = 118 (46.6 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+ LR A R E
Sbjct: 213 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESD 272
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + ++++Q + +AI E +SL +D + A L A+ L+
Sbjct: 273 TLTLSGEMAVKREQLKNGGLGVVSDAIFELGKSLSAFNLDDTEVALLQAVLLM 325
Score = 75 (31.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+
Sbjct: 213 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEI 258
>RGD|3857 [details] [associations]
symbol:Thra "thyroid hormone receptor alpha" species:10116 "Rattus
norvegicus" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=IDA] [GO:0001502 "cartilage condensation"
evidence=IEA;ISO] [GO:0001503 "ossification" evidence=IEA;ISO]
[GO:0001822 "kidney development" evidence=IEP] [GO:0001889 "liver
development" evidence=IEP] [GO:0002153 "steroid receptor RNA
activator RNA binding" evidence=IEA;ISO] [GO:0002155 "regulation of
thyroid hormone mediated signaling pathway" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=ISO;IDA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IEA;ISO;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006950 "response to stress"
evidence=IEP] [GO:0007420 "brain development" evidence=IEP]
[GO:0007611 "learning or memory" evidence=IEA;ISO] [GO:0008016
"regulation of heart contraction" evidence=IEA;ISO] [GO:0008050
"female courtship behavior" evidence=IEA;ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009409 "response to cold"
evidence=IEA;ISO] [GO:0009755 "hormone-mediated signaling pathway"
evidence=ISO] [GO:0009887 "organ morphogenesis" evidence=ISO]
[GO:0010831 "positive regulation of myotube differentiation"
evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IEA;ISO] [GO:0017055 "negative regulation of RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IEA;ISO]
[GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
[GO:0030218 "erythrocyte differentiation" evidence=IEA;ISO]
[GO:0030324 "lung development" evidence=IEP] [GO:0030325 "adrenal
gland development" evidence=IEP] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0031490 "chromatin DNA binding"
evidence=IEA;ISO] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032403 "protein complex binding" evidence=IEA;ISO]
[GO:0033032 "regulation of myeloid cell apoptotic process"
evidence=IEA;ISO] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0042994 "cytoplasmic sequestering of transcription factor"
evidence=IEA;ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0044213 "intronic transcription
regulatory region DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045925
"positive regulation of female receptivity" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO;IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IDA] [GO:0048565 "digestive tract
development" evidence=IEP] [GO:0048568 "embryonic organ development"
evidence=IEP] [GO:0050994 "regulation of lipid catabolic process"
evidence=IEA;ISO] [GO:0070324 "thyroid hormone binding"
evidence=IEA;ISO] [GO:2000143 "negative regulation of DNA-dependent
transcription, initiation" evidence=IEA;ISO] [GO:0003677 "DNA
binding" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:98742 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0032403 GO:GO:0046872 GO:GO:0009409
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0008016
GO:GO:0007611 EMBL:CH466556 GO:GO:0044212 GO:GO:0030218 GO:GO:0070324
GO:GO:0001502 GO:GO:0001503 GO:GO:0031490 GO:GO:2000143 GO:GO:0050994
GO:GO:0004887 GO:GO:0042994 EMBL:AL590963 GO:GO:0010831
HOVERGEN:HBG005606 GO:GO:0030878 GO:GO:0002155 GO:GO:0017055
GO:GO:0045925 GO:GO:0008050 GO:GO:0033032
GeneTree:ENSGT00680000099662 CTD:7067 KO:K05547 eggNOG:NOG272726
OMA:DEEPEVC OrthoDB:EOG4B2SX0 GO:GO:0002153 EMBL:X07750 EMBL:X07751
EMBL:X07752 EMBL:X51983 EMBL:AK078233 EMBL:BC046795 IPI:IPI00134812
IPI:IPI00229975 IPI:IPI00229976 IPI:IPI00955166 PIR:S14416 PIR:S14417
PIR:S14418 PIR:S14690 RefSeq:NP_835161.1 UniGene:Mm.265917
UniGene:Mm.442648 ProteinModelPortal:P63058 SMR:P63058 DIP:DIP-43752N
MINT:MINT-3374329 STRING:P63058 PhosphoSite:P63058 PRIDE:P63058
Ensembl:ENSMUST00000064187 Ensembl:ENSMUST00000103139
Ensembl:ENSMUST00000124072 GeneID:21833 KEGG:mmu:21833
UCSC:uc007lhe.1 UCSC:uc007lhf.1 UCSC:uc007lhg.1 InParanoid:Q80Y90
NextBio:301282 Bgee:P63058 CleanEx:MM_THRA Genevestigator:P63058
GermOnline:ENSMUSG00000058756 Uniprot:P63058
Length = 492
Score = 167 (63.8 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 35/94 (37%), Positives = 46/94 (48%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXX 91
P+ + C VCGD A HY TCEGCKGFF+RT+QK Y C D C +D
Sbjct: 44 PSYLDKDEQCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKIT 103
Query: 92 XXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + +L
Sbjct: 104 RNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRKL 137
Score = 118 (46.6 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+ LR A R E
Sbjct: 213 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESD 272
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + ++++Q + +AI E +SL +D + A L A+ L+
Sbjct: 273 TLTLSGEMAVKREQLKNGGLGVVSDAIFELGKSLSAFNLDDTEVALLQAVLLM 325
Score = 75 (31.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+
Sbjct: 213 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEI 258
>UNIPROTKB|P63059 [details] [associations]
symbol:Thra "Thyroid hormone receptor alpha" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3857 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0009409 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0008016 GO:GO:0007611 GO:GO:0044212
GO:GO:0030218 GO:GO:0070324 GO:GO:0001502 GO:GO:0001503
GO:GO:0031490 GO:GO:2000143 GO:GO:0050994 GO:GO:0004887
GO:GO:0042994 GO:GO:0010831 HOVERGEN:HBG005606 GO:GO:0030878
GO:GO:0002155 GO:GO:0017055 GO:GO:0045925 GO:GO:0008050
GO:GO:0033032 CTD:7067 KO:K05547 eggNOG:NOG272726 OrthoDB:EOG4B2SX0
GO:GO:0002153 EMBL:M31174 EMBL:M31177 EMBL:M18028 EMBL:X12744
IPI:IPI00231074 IPI:IPI00324673 PIR:A36752 PIR:I57696 PIR:I67429
PIR:S06410 PIR:S06907 PIR:S09178 RefSeq:NP_001017960.1
RefSeq:NP_112396.2 UniGene:Rn.11307 ProteinModelPortal:P63059
SMR:P63059 STRING:P63059 PhosphoSite:P63059 GeneID:81812
KEGG:rno:81812 InParanoid:P63059 BindingDB:P63059 ChEMBL:CHEMBL4823
NextBio:615701 Genevestigator:P63059 GermOnline:ENSRNOG00000009066
Uniprot:P63059
Length = 492
Score = 167 (63.8 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 35/94 (37%), Positives = 46/94 (48%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXX 91
P+ + C VCGD A HY TCEGCKGFF+RT+QK Y C D C +D
Sbjct: 44 PSYLDKDEQCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKIT 103
Query: 92 XXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + +L
Sbjct: 104 RNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRKL 137
Score = 118 (46.6 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+ LR A R E
Sbjct: 213 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESD 272
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + ++++Q + +AI E +SL +D + A L A+ L+
Sbjct: 273 TLTLSGEMAVKREQLKNGGLGVVSDAIFELGKSLSAFNLDDTEVALLQAVLLM 325
Score = 75 (31.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+
Sbjct: 213 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEI 258
>UNIPROTKB|P35398 [details] [associations]
symbol:RORA "Nuclear receptor ROR-alpha" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006809 "nitric oxide biosynthetic process" evidence=IEA]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=IEA] [GO:0043030 "regulation of macrophage activation"
evidence=IEA] [GO:0046068 "cGMP metabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0046872 Pathway_Interaction_DB:hif1_tfpathway GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0006809
EMBL:CH471082 GO:GO:0006367 EMBL:AC087385 GO:GO:0021702
GO:GO:0046068 Reactome:REACT_24941 GO:GO:0043030 eggNOG:NOG324222
EMBL:U04897 EMBL:U04898 EMBL:U04899 EMBL:L14611 EMBL:HQ692818
EMBL:AC009560 EMBL:AC012404 EMBL:AC022898 EMBL:AC079068
EMBL:AC107241 EMBL:AC107905 EMBL:BC008831 EMBL:BC100987
EMBL:BC100988 EMBL:BC100989 EMBL:BC100990 IPI:IPI00018225
IPI:IPI00107635 IPI:IPI00218544 IPI:IPI00243584 PIR:A53196
PIR:A56856 PIR:B53196 PIR:C53196 RefSeq:NP_002934.1
RefSeq:NP_599022.1 RefSeq:NP_599023.1 RefSeq:NP_599024.1
UniGene:Hs.560343 UniGene:Hs.655155 PDB:1N83 PDB:1S0X PDBsum:1N83
PDBsum:1S0X ProteinModelPortal:P35398 SMR:P35398 DIP:DIP-29938N
IntAct:P35398 MINT:MINT-2855668 STRING:P35398 PhosphoSite:P35398
DMDM:548814 PRIDE:P35398 Ensembl:ENST00000261523
Ensembl:ENST00000309157 Ensembl:ENST00000335670
Ensembl:ENST00000449337 GeneID:6095 KEGG:hsa:6095 UCSC:uc002agt.4
UCSC:uc002agv.3 UCSC:uc002agw.3 UCSC:uc002agx.3 CTD:6095
GeneCards:GC15M060780 HGNC:HGNC:10258 HPA:CAB009861 MIM:600825
neXtProt:NX_P35398 PharmGKB:PA34630 HOGENOM:HOG000010200
HOVERGEN:HBG106848 InParanoid:P35398 KO:K08532 OMA:VAAQIEI
PhylomeDB:P35398 BindingDB:P35398 ChEMBL:CHEMBL5868 ChiTaRS:RORA
EvolutionaryTrace:P35398 GenomeRNAi:6095 NextBio:23703
ArrayExpress:P35398 Bgee:P35398 CleanEx:HS_RORA
Genevestigator:P35398 GermOnline:ENSG00000069667 Uniprot:P35398
Length = 556
Score = 164 (62.8 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C K C +D
Sbjct: 106 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQK 165
Query: 103 CLQVGMVKEVVR 114
CL VGM ++ V+
Sbjct: 166 CLAVGMSRDAVK 177
Score = 123 (48.4 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 43/169 (25%), Positives = 84/169 (49%)
Query: 172 TTSVDVIRHFADKIP-GFSDLCKEDQELLFQSASLELFYREPNPLEP-PIAEPEKIQQFY 229
T S+ + H A I + C+ +E L Q + + F +E +E + E + Q
Sbjct: 300 TVSMAELEHLAQNISKSHLETCQYLREEL-QQITWQTFLQEE--IENYQNKQREVMWQLC 356
Query: 230 SL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCN 288
++ +T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +R+ R ++ +
Sbjct: 357 AIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMC-RAFDSQNNTVYFD 415
Query: 289 GVVLEKQQCQRSFG-DDWLNAILEFCQSL---HLMEIDISAFACLCALT 333
G +S G +D+++ + EF +SL HL E +I+ F+ ++
Sbjct: 416 GKYASPDVF-KSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMS 463
Score = 81 (33.6 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 171 LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY 209
+T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +
Sbjct: 360 ITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVF 398
>RGD|1359557 [details] [associations]
symbol:Esrrb "estrogen-related receptor beta" species:10116
"Rattus norvegicus" [GO:0000980 "RNA polymerase II distal enhancer
sequence-specific DNA binding" evidence=IEA;ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA;ISO]
[GO:0001834 "trophectodermal cell proliferation" evidence=IEA;ISO]
[GO:0001892 "embryonic placenta development" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA;ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:1359557
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0001892
GO:GO:0019827 GO:GO:0001831 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 GeneTree:ENSGT00700000104391 CTD:2103 KO:K08553
OMA:EDRHLGS OrthoDB:EOG479F71 GO:GO:0001834 EMBL:X51417
EMBL:AY383731 IPI:IPI00194043 RefSeq:NP_001008516.2
UniGene:Rn.104984 ProteinModelPortal:P11475 SMR:P11475
STRING:P11475 PhosphoSite:P11475 PRIDE:P11475
Ensembl:ENSRNOT00000013867 GeneID:299210 KEGG:rno:299210
UCSC:RGD:1359557 InParanoid:P11475 NextBio:645036
Genevestigator:P11475 Uniprot:P11475
Length = 433
Score = 225 (84.3 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 65/185 (35%), Positives = 86/185 (46%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXX 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C +
Sbjct: 99 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 158
Query: 99 XXXXCLQVGMVKEVVRTDSLKGRRG----RLXXXXXXXXXXXXXX-----XXXLIT-ALY 148
CL+VGM+KE VR D ++G R RL +++ L
Sbjct: 159 RFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSENSPYLSLQISPPAKKPLTKIVSYLLV 218
Query: 149 REPNPLE--PPIAEPEKIQQFYSLLTTSVD----VIRHFADKIPGFSDLCKEDQELLFQS 202
EP+ L PP PE + + L D + +A IPGFS+L DQ L QS
Sbjct: 219 AEPDKLYAMPPDDVPEGDIKALTTLCDLADRELVFLISWAKHIPGFSNLTLGDQMSLLQS 278
Query: 203 ASLEL 207
A +E+
Sbjct: 279 AWMEI 283
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 36/133 (27%), Positives = 63/133 (47%)
Query: 203 ASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQ 262
A + Y P P + P + + + L + + +A IPGFS+L DQ L Q
Sbjct: 219 AEPDKLYAMP-PDDVPEGDIKALTTLCDLADRELVFLISWAKHIPGFSNLTLGDQMSLLQ 277
Query: 263 SASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEI 321
SA +E+ +L + YR+ D KL + +++++ R G + AIL+ + +++
Sbjct: 278 SAWMEILILGIVYRSLPYDDKLAYAEDYIMDEEH-SRLVGLLELYRAILQLVRRYKKLKV 336
Query: 322 DISAFACLCALTL 334
+ F L AL L
Sbjct: 337 EKEEFVMLKALAL 349
>UNIPROTKB|O97716 [details] [associations]
symbol:THRA "Thyroid hormone receptor alpha" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004887 "thyroid hormone receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887 HOVERGEN:HBG005606
CTD:7067 KO:K05547 eggNOG:NOG272726 HOGENOM:HOG000010313
OrthoDB:EOG4B2SX0 EMBL:AJ005798 EMBL:AJ005797 RefSeq:NP_999355.1
UniGene:Ssc.31357 ProteinModelPortal:O97716 SMR:O97716
STRING:O97716 GeneID:397387 KEGG:ssc:397387 Uniprot:O97716
Length = 506
Score = 167 (63.8 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 35/94 (37%), Positives = 46/94 (48%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXX 91
P+ + C VCGD A HY TCEGCKGFF+RT+QK Y C D C +D
Sbjct: 44 PSYLDKDEQCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKIT 103
Query: 92 XXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + +L
Sbjct: 104 RNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRKL 137
Score = 118 (46.6 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+ LR A R E
Sbjct: 213 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESD 272
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + ++++Q + +AI E +SL +D + A L A+ L+
Sbjct: 273 TLTLSGEMAVKREQLKNGGLGVVSDAIFELGKSLSAFNLDDTEVALLQAVLLM 325
Score = 75 (31.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+
Sbjct: 213 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEI 258
>FB|FBgn0035849 [details] [associations]
symbol:ERR "estrogen-related receptor" species:7227
"Drosophila melanogaster" [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 EMBL:AE014296
GO:GO:0005496 GO:GO:0046872 GO:GO:0005975 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 eggNOG:NOG282629
GeneTree:ENSGT00700000104391 HSSP:O95718 EMBL:AF359421
RefSeq:NP_648183.3 UniGene:Dm.882 SMR:Q8WS79 STRING:Q8WS79
EnsemblMetazoa:FBtr0076725 GeneID:38912 KEGG:dme:Dmel_CG7404
UCSC:CG7404-RB CTD:38912 FlyBase:FBgn0035849 InParanoid:Q8WS79
KO:K08703 OMA:VIGWAKQ OrthoDB:EOG4SXKV0 GenomeRNAi:38912
NextBio:810976 Uniprot:Q8WS79
Length = 496
Score = 196 (74.1 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 36/82 (43%), Positives = 49/82 (59%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD+A+ HYGV +CE CK FFKRT+Q +Y C A+ C ++
Sbjct: 125 RLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNECEINKRRRKACQACRF 184
Query: 101 XXCLQVGMVKEVVRTDSLKGRR 122
CL +GM+KE VR D ++G R
Sbjct: 185 QKCLLMGMLKEGVRLDRVRGGR 206
Score = 80 (33.2 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 236 VDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEK 294
V VI +A +IPGF DL DQ L Q + E+ L+L +R+ + KL F V +++
Sbjct: 314 VSVIG-WAKQIPGFIDLPLNDQMKLLQVSWAEILTLQLTFRSLPFNGKLCFATDVWMDE 371
Score = 50 (22.7 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 175 VDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
V VI +A +IPGF DL DQ L Q + E+
Sbjct: 314 VSVIG-WAKQIPGFIDLPLNDQMKLLQVSWAEI 345
>UNIPROTKB|Q1RMT4 [details] [associations]
symbol:THRA "Thyroid hormone receptor, alpha
(Erythroblastic leukemia viral (V-erb-a) oncogene homolog, avian)"
species:9913 "Bos taurus" [GO:2000143 "negative regulation of
DNA-dependent transcription, initiation" evidence=IEA] [GO:0070324
"thyroid hormone binding" evidence=IEA] [GO:0050994 "regulation of
lipid catabolic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045925 "positive regulation of female
receptivity" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042994 "cytoplasmic
sequestering of transcription factor" evidence=IEA] [GO:0033032
"regulation of myeloid cell apoptotic process" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0030218 "erythrocyte
differentiation" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0017055 "negative regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0010831 "positive regulation of myotube differentiation"
evidence=IEA] [GO:0009409 "response to cold" evidence=IEA]
[GO:0008050 "female courtship behavior" evidence=IEA] [GO:0008016
"regulation of heart contraction" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0002155
"regulation of thyroid hormone mediated signaling pathway"
evidence=IEA] [GO:0002153 "steroid receptor RNA activator RNA
binding" evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004887 "thyroid hormone receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0009409 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0008016 GO:GO:0007611 GO:GO:0044212
GO:GO:0030218 GO:GO:0070324 GO:GO:0001502 GO:GO:0001503
GO:GO:0031490 GO:GO:2000143 GO:GO:0050994 GO:GO:0004887
GO:GO:0042994 GO:GO:0010831 HOVERGEN:HBG005606 GO:GO:0030878
GO:GO:0002155 GO:GO:0017055 GO:GO:0045925 GO:GO:0008050
GO:GO:0033032 GeneTree:ENSGT00680000099662 CTD:7067 KO:K05547
eggNOG:NOG272726 HOGENOM:HOG000010313 OMA:DEEPEVC OrthoDB:EOG4B2SX0
GO:GO:0002153 EMBL:DAAA02049128 EMBL:BC114725 IPI:IPI00687166
RefSeq:NP_001039794.1 UniGene:Bt.21583 SMR:Q1RMT4 STRING:Q1RMT4
Ensembl:ENSBTAT00000014236 GeneID:532621 KEGG:bta:532621
InParanoid:Q1RMT4 NextBio:20875751 Uniprot:Q1RMT4
Length = 511
Score = 167 (63.8 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 35/94 (37%), Positives = 46/94 (48%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXX 91
P+ + C VCGD A HY TCEGCKGFF+RT+QK Y C D C +D
Sbjct: 44 PSYLDKDEQCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKIT 103
Query: 92 XXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + +L
Sbjct: 104 RNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRKL 137
Score = 118 (46.6 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+ LR A R E
Sbjct: 213 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESD 272
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + ++++Q + +AI E +SL +D + A L A+ L+
Sbjct: 273 TLTLSGEMAVKREQLKNGGLGVVSDAIFELGKSLSAFNLDDTEVALLQAVLLM 325
Score = 75 (31.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+
Sbjct: 213 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEI 258
>UNIPROTKB|E2QZW9 [details] [associations]
symbol:THRA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004887 "thyroid hormone receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887
GeneTree:ENSGT00680000099662 OMA:DEEPEVC EMBL:AAEX03006466
EMBL:AAEX03006467 UniGene:Cfa.3463 Ensembl:ENSCAFT00000025690
NextBio:20817106 Uniprot:E2QZW9
Length = 511
Score = 167 (63.8 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 35/94 (37%), Positives = 46/94 (48%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXX 91
P+ + C VCGD A HY TCEGCKGFF+RT+QK Y C D C +D
Sbjct: 44 PSYLDKDEQCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKIT 103
Query: 92 XXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + +L
Sbjct: 104 RNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRKL 137
Score = 118 (46.6 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+ LR A R E
Sbjct: 213 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESD 272
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + ++++Q + +AI E +SL +D + A L A+ L+
Sbjct: 273 TLTLSGEMAVKREQLKNGGLGVVSDAIFELGKSLSAFNLDDTEVALLQAVLLM 325
Score = 75 (31.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+
Sbjct: 213 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEI 258
>UNIPROTKB|F1NMB7 [details] [associations]
symbol:ESR2 "Estrogen receptor beta" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IEA] [GO:0034056 "estrogen response
element binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0050680 "negative regulation
of epithelial cell proliferation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060065 "uterus development"
evidence=IEA] [GO:0060068 "vagina development" evidence=IEA]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IEA]
[GO:0060743 "epithelial cell maturation involved in prostate gland
development" evidence=IEA] [GO:0060766 "negative regulation of
androgen receptor signaling pathway" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005739 GO:GO:0005634 GO:GO:0051091
GO:GO:0005496 GO:GO:0046872 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0043065 GO:GO:0050680
GeneTree:ENSGT00700000104072 GO:GO:0030520 GO:GO:0001046
GO:GO:0060766 GO:GO:0034056 OMA:LYAEPQK InterPro:IPR021064
Pfam:PF12497 IPI:IPI00583235 EMBL:AADN02003851 EMBL:AADN02003849
EMBL:AADN02003850 Ensembl:ENSGALT00000019259 Uniprot:F1NMB7
Length = 472
Score = 174 (66.3 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 32 SRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXX 91
S P + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 94 SNPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNR 153
Query: 92 XXXXXXXXXXXCLQVGMVK 110
C +VGM+K
Sbjct: 154 RKSCQACRLRKCYEVGMMK 172
Score = 108 (43.1 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 40/163 (24%), Positives = 73/163 (44%)
Query: 184 KIPGFSDLCKEDQELLFQSASLELFYREPNPLEPP---IAEPEK----IQQFYSLLTTSV 236
K +++ +E+L + S E F EPP ++ P K SL +
Sbjct: 197 KTKKYNEAATRVKEILLSTVSPEQFVLTLLEAEPPNVLVSRPSKPFTEASMMMSLTKLAD 256
Query: 237 DVIRH---FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLE 293
+ H +A KIPGF DL DQ L +S +E+ ++ L +R+ KLIF +VL+
Sbjct: 257 KELVHMIGWAKKIPGFIDLSLYDQVRLLESCWMEVLMIGLMWRSIDHPGKLIFAPDLVLD 316
Query: 294 KQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ + + G + + +L +++ + C+ A+ L+
Sbjct: 317 RDEGKCVEGILEIFDMLLAMTSRFRELKLQHKEYLCVKAMILL 359
Score = 62 (26.9 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 23/70 (32%), Positives = 32/70 (45%)
Query: 143 LITALYREP-NPL--EP--PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQE 197
++T L EP N L P P E + L + + +A KIPGF DL DQ
Sbjct: 222 VLTLLEAEPPNVLVSRPSKPFTEASMMMSLTKLADKELVHMIGWAKKIPGFIDLSLYDQV 281
Query: 198 LLFQSASLEL 207
L +S +E+
Sbjct: 282 RLLESCWMEV 291
>UNIPROTKB|Q9PTU5 [details] [associations]
symbol:ESR2 "Estrogen receptor beta" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOVERGEN:HBG108344 HOGENOM:HOG000233468
CTD:2100 eggNOG:NOG271979 KO:K08551 OrthoDB:EOG41RPTT
InterPro:IPR021064 Pfam:PF12497 EMBL:AB036415 IPI:IPI00583235
RefSeq:NP_990125.1 UniGene:Gga.314 ProteinModelPortal:Q9PTU5
SMR:Q9PTU5 STRING:Q9PTU5 GeneID:395575 KEGG:gga:395575
InParanoid:Q9PTU5 NextBio:20815649 Uniprot:Q9PTU5
Length = 472
Score = 174 (66.3 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 32 SRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXX 91
S P + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 94 SNPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNR 153
Query: 92 XXXXXXXXXXXCLQVGMVK 110
C +VGM+K
Sbjct: 154 RKSCQACRLRKCYEVGMMK 172
Score = 108 (43.1 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 40/163 (24%), Positives = 73/163 (44%)
Query: 184 KIPGFSDLCKEDQELLFQSASLELFYREPNPLEPP---IAEPEK----IQQFYSLLTTSV 236
K +++ +E+L + S E F EPP ++ P K SL +
Sbjct: 197 KTKKYNEAATRVKEILLSTVSPEQFVLTLLEAEPPNVLVSRPSKPFTEASMMMSLTKLAD 256
Query: 237 DVIRH---FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLE 293
+ H +A KIPGF DL DQ L +S +E+ ++ L +R+ KLIF +VL+
Sbjct: 257 KELVHMIGWAKKIPGFIDLSLYDQVRLLESCWMEVLMIGLMWRSIDHPGKLIFAPDLVLD 316
Query: 294 KQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ + + G + + +L +++ + C+ A+ L+
Sbjct: 317 RDEGKCVEGILEIFDMLLAMTSRFRELKLQHKEYLCVKAMILL 359
Score = 62 (26.9 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 23/70 (32%), Positives = 32/70 (45%)
Query: 143 LITALYREP-NPL--EP--PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQE 197
++T L EP N L P P E + L + + +A KIPGF DL DQ
Sbjct: 222 VLTLLEAEPPNVLVSRPSKPFTEASMMMSLTKLADKELVHMIGWAKKIPGFIDLSLYDQV 281
Query: 198 LLFQSASLEL 207
L +S +E+
Sbjct: 282 RLLESCWMEV 291
>UNIPROTKB|E9PK95 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AL645940 EMBL:AL662824 EMBL:AL844527
EMBL:CR759733 EMBL:CR936877 EMBL:CR354565 HGNC:HGNC:10478
ChiTaRS:RXRB IPI:IPI00984407 SMR:E9PK95 Ensembl:ENST00000531100
Ensembl:ENST00000544186 Ensembl:ENST00000546880
Ensembl:ENST00000549889 Ensembl:ENST00000552670
Ensembl:ENST00000553072 UCSC:uc011dqr.2 Uniprot:E9PK95
Length = 347
Score = 196 (74.1 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 36/86 (41%), Positives = 51/86 (59%)
Query: 36 PPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXX 95
P + +LCA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C VD
Sbjct: 8 PGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRC 67
Query: 96 XXXXXXXCLQVGMVKEVVRTDSLKGR 121
CL GM +E V+ + +G+
Sbjct: 68 QYCRYQKCLATGMKREAVQEERQRGK 93
Score = 71 (30.1 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS- 300
+A +IP FS L +DQ +L ++ EL + ++R+ ++ G+ + + +
Sbjct: 163 WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAG 222
Query: 301 FG---DDWLNAIL-EFCQSLHLMEIDISAFACLCALTL 334
G D L+ +L E + M +D + CL A+ L
Sbjct: 223 VGAIFDRSLSRVLTELVSKMRDMRMDKTELGCLRAIIL 260
Score = 46 (21.3 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A +IP FS L +DQ +L ++ EL
Sbjct: 163 WAKRIPHFSSLPLDDQVILLRAGWNEL 189
>UNIPROTKB|F1S075 [details] [associations]
symbol:RORA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046068 "cGMP metabolic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043030 "regulation of
macrophage activation" evidence=IEA] [GO:0021702 "cerebellar
Purkinje cell differentiation" evidence=IEA] [GO:0006809 "nitric
oxide biosynthetic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0030522
GO:GO:0006809 GO:GO:0021702 GO:GO:0046068 GO:GO:0043030
GeneTree:ENSGT00700000104109 OMA:VAAQIEI EMBL:CU571371
EMBL:CU618323 Ensembl:ENSSSCT00000005055 Uniprot:F1S075
Length = 506
Score = 164 (62.8 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C K C +D
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQK 69
Query: 103 CLQVGMVKEVVR 114
CL VGM ++ V+
Sbjct: 70 CLAVGMSRDAVK 81
Score = 121 (47.7 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 46/184 (25%), Positives = 90/184 (48%)
Query: 160 EPEKIQQFYSLLT---TSVDVIRHFADKIP-GFSDLCKEDQELLFQSASLELFYREPNPL 215
E + Q F S ++ S+ +H A I + C+ +E L Q + + F +E +
Sbjct: 235 EQRRSQDFPSEVSRPENSLKEFKHLAQNISKSHLETCQYLREEL-QQITWQTFLQEE--I 291
Query: 216 EP-PIAEPEKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRL 273
E + E + Q ++ +T ++ + FA +I GF +LC+ DQ +L ++ SLE+ +R+
Sbjct: 292 ENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRM 351
Query: 274 AYRTRAEDTKLIFCNGVVLEKQQCQRSFG-DDWLNAILEFCQSL---HLMEIDISAFACL 329
R ++ +G +S G +D+++ + EF +SL HL E +I+ F+
Sbjct: 352 C-RAFDSQNNTVYFDGKYASPDVF-KSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAF 409
Query: 330 CALT 333
++
Sbjct: 410 VLMS 413
>UNIPROTKB|P04625 [details] [associations]
symbol:THRA "Thyroid hormone receptor alpha" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887 HOVERGEN:HBG005606
PDB:3UVV PDBsum:3UVV CTD:7067 KO:K05547 EMBL:X04854 EMBL:Y00987
IPI:IPI00600673 PIR:A25236 RefSeq:NP_990644.1 UniGene:Gga.725
ProteinModelPortal:P04625 SMR:P04625 IntAct:P04625 STRING:P04625
GeneID:396251 KEGG:gga:396251 eggNOG:NOG239523 BindingDB:P04625
NextBio:20816303 Uniprot:P04625
Length = 408
Score = 166 (63.5 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 35/94 (37%), Positives = 46/94 (48%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXX 91
P+ + C VCGD A HY TCEGCKGFF+RT+QK Y C D C +D
Sbjct: 42 PSYLDKDEQCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDGCCVIDKIT 101
Query: 92 XXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + +L
Sbjct: 102 RNQCQLCRFKKCISVGMAMDLVLDDSKRVAKRKL 135
Score = 115 (45.5 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+ LR A R E
Sbjct: 211 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESE 270
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + ++++Q + +AI + +SL +D + A L A+ L+
Sbjct: 271 TLTLSGEMAVKREQLKNGGLGVVSDAIFDLGKSLSAFNLDDTEVALLQAVLLM 323
Score = 75 (31.5 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+
Sbjct: 211 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEI 256
>ZFIN|ZDB-GENE-060613-1 [details] [associations]
symbol:thrab "thyroid hormone receptor alpha b"
species:7955 "Danio rerio" [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR001728 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-060613-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887
GeneTree:ENSGT00680000099662 EMBL:BX510316 IPI:IPI00897050
Ensembl:ENSDART00000074549 Uniprot:F1QME0
Length = 391
Score = 167 (63.8 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 35/85 (41%), Positives = 43/85 (50%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXXXXXXXXXXX 100
C VCGD A HY TCEGCKGFF+RT+QK Y C D C +D
Sbjct: 34 CVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDGCCIIDKITRNQCQLCRF 93
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + RL
Sbjct: 94 KKCIAVGMAMDLVLDDSKRVAKRRL 118
Score = 113 (44.8 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+ LR A R E
Sbjct: 194 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESE 253
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + ++++Q + +AI + +SL +D + A L A+ L+
Sbjct: 254 TLTLSGEMAVKREQLKNGGLGVVSDAIFDLGKSLAQFNLDDTEVALLQAVLLM 306
Score = 75 (31.5 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+
Sbjct: 194 EAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEI 239
>UNIPROTKB|I3L553 [details] [associations]
symbol:RORC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072539 "T-helper 17 cell differentiation"
evidence=IEA] [GO:0048537 "mucosal-associated lymphoid tissue
development" evidence=IEA] [GO:0048535 "lymph node development"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006468
GO:GO:0033077 GO:GO:0030522 GO:GO:0048535
GeneTree:ENSGT00700000104109 GO:GO:0048537 GO:GO:0072539
OMA:AFPPLYK EMBL:FP340554 Ensembl:ENSSSCT00000029985 Uniprot:I3L553
Length = 574
Score = 163 (62.4 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q Y C + CP+D
Sbjct: 87 CKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVAYSCTRQQNCPIDRTSRNRCQHCRLQK 146
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ V+
Sbjct: 147 CLALGMSRDAVK 158
Score = 122 (48.0 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 48/198 (24%), Positives = 87/198 (43%)
Query: 149 REPNPLEPPIAEPEKIQQFY---SLLTT------SVDVIRHFADKI-PGFSDLCKEDQEL 198
R +P P + EP + Y S +T S+ I H + + D C+ E
Sbjct: 288 RFEDPRHPGLGEPGRGPDSYCSPSFRSTPEAPYASLTEIEHLVQNVCKSYRDTCQLRLED 347
Query: 199 LFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQE 258
L + S +F RE + E ++ LT ++ + FA ++ GF +LC+ DQ
Sbjct: 348 LLRQRS-NIFSREEVAGYQRKSMWEMWERCAHRLTEAIQYVVEFAKRLSGFMELCQNDQI 406
Query: 259 LLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFG-DDWLNAILEFCQSLH 317
+L ++ ++E+ ++R+ R D +F G + R+ G + +++I +F +SL
Sbjct: 407 VLLKAGAMEVVLVRMC-RAYNADNHTVFFEGKY-GGMELFRALGCSELISSIFDFSRSLS 464
Query: 318 LMEIDISAFACLCALTLI 335
+ A AL LI
Sbjct: 465 ALRFSEDEIALYTALVLI 482
Score = 37 (18.1 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 28 GCDTSRPTPPSP 39
G D + P PPSP
Sbjct: 51 GPDGATPFPPSP 62
>RGD|68350 [details] [associations]
symbol:Nr5a1 "nuclear receptor subfamily 5, group A, member 1"
species:10116 "Rattus norvegicus" [GO:0001553 "luteinization"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=NAS] [GO:0005543 "phospholipid binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA;ISO] [GO:0008585
"female gonad development" evidence=IEP] [GO:0009888 "tissue
development" evidence=IEA;ISO] [GO:0010259 "multicellular organismal
aging" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IEA;ISO] [GO:0022414 "reproductive process" evidence=ISO]
[GO:0030154 "cell differentiation" evidence=IEA;ISO] [GO:0030325
"adrenal gland development" evidence=IEA;ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=NAS]
[GO:0042445 "hormone metabolic process" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051457
"maintenance of protein location in nucleus" evidence=IEA;ISO]
[GO:2000020 "positive regulation of male gonad development"
evidence=IEA;ISO] [GO:2000195 "negative regulation of female gonad
development" evidence=IEA;ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:68350 GO:GO:0005634 GO:GO:0030154 GO:GO:0030325 GO:GO:0008585
GO:GO:0005543 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003682 GO:GO:0003705
GO:GO:0008584 GO:GO:0003690 GO:GO:0051457 GO:GO:0001553
GO:GO:0009888 GO:GO:2000195 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 CTD:2516 KO:K08560
OMA:PFGLMCK OrthoDB:EOG4FJ891 EMBL:D42156 IPI:IPI00199452 PIR:A56120
RefSeq:NP_001178028.1 UniGene:Rn.229378 ProteinModelPortal:P50569
SMR:P50569 STRING:P50569 PhosphoSite:P50569 PRIDE:P50569
Ensembl:ENSRNOT00000017651 GeneID:83826 KEGG:rno:83826
UCSC:RGD:68350 InParanoid:P50569 NextBio:616450 ArrayExpress:P50569
Genevestigator:P50569 GermOnline:ENSRNOG00000012682 Uniprot:P50569
Length = 462
Score = 200 (75.5 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 37/84 (44%), Positives = 46/84 (54%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C ++C +D
Sbjct: 11 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRF 70
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
CL VGM E VR D ++G R +
Sbjct: 71 QKCLTVGMRLEAVRADRMRGGRNK 94
Score = 71 (30.1 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 35/128 (27%), Positives = 52/128 (40%)
Query: 216 EPPIAEPEKIQQFYSLLTTSVDV----IRHFADKIPGFSDLCKEDQELLFQSASLELFVL 271
EP + P++ F SLL D I +A + F +L DQ L Q+ EL VL
Sbjct: 251 EPAKSRPDQPAPF-SLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQNCWSELLVL 309
Query: 272 RLAYRT--RAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAIL---EFCQSLHLMEIDISAF 326
YR ++ ++ G +E G + +L E LH +++D F
Sbjct: 310 DHIYRQVQYGKEDSILLVTGQEVELSTVAVQAGSLLHSLVLRAQELVLQLHALQLDRQEF 369
Query: 327 ACLCALTL 334
CL L L
Sbjct: 370 VCLKFLIL 377
>RGD|3611 [details] [associations]
symbol:Rxrb "retinoid X receptor beta" species:10116 "Rattus
norvegicus" [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001893 "maternal placenta development"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030375 "thyroid hormone
receptor coactivator activity" evidence=IDA] [GO:0031641 "regulation
of myelination" evidence=IDA] [GO:0042809 "vitamin D receptor
binding" evidence=IDA] [GO:0042974 "retinoic acid receptor binding"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046966 "thyroid hormone receptor binding" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=ISO]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=ISO] [GO:0060038 "cardiac muscle cell proliferation"
evidence=ISO] [GO:0071300 "cellular response to retinoic acid"
evidence=ISO] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3611 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0030375 GO:GO:0046982 GO:GO:0042974
GO:GO:0046966 GO:GO:0060038 GO:GO:0031641 HOVERGEN:HBG005606
GO:GO:0042809 GO:GO:0055012 OrthoDB:EOG4SJ5DV GO:GO:0004886
EMBL:M81766 IPI:IPI00394256 PIR:A41651 UniGene:Rn.49295
ProteinModelPortal:P49743 SMR:P49743 STRING:P49743 PhosphoSite:P49743
UCSC:RGD:3611 InParanoid:P49743 BindingDB:P49743 ChEMBL:CHEMBL2805
ArrayExpress:P49743 Genevestigator:P49743
GermOnline:ENSRNOG00000000464 Uniprot:P49743
Length = 458
Score = 197 (74.4 bits), Expect = 8.2e-18, Sum P(2) = 8.2e-18
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 34 PTPPSPS---QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
P P P +LCA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C VD
Sbjct: 118 PPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKR 177
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGR 121
CL GM +E V+ + +G+
Sbjct: 178 QRNRCQYCRYQKCLATGMKREAVQEERQRGK 208
Score = 74 (31.1 bits), Expect = 8.2e-18, Sum P(2) = 8.2e-18
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS- 300
+A +IP FS L +DQ +L ++ EL + ++R+ ++ G+ + + +
Sbjct: 278 WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAG 337
Query: 301 FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
G + + E + M +D + CL A+ L
Sbjct: 338 VGAIFDRVLTELVSKMRDMRMDKTELGCLRAIIL 371
Score = 46 (21.3 bits), Expect = 6.7e-15, Sum P(2) = 6.7e-15
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A +IP FS L +DQ +L ++ EL
Sbjct: 278 WAKRIPHFSSLPLDDQVILLRAGWNEL 304
>UNIPROTKB|Q5BIS6 [details] [associations]
symbol:NR1H2 "Oxysterols receptor LXR-beta" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 eggNOG:NOG285805
EMBL:BT021148 EMBL:BC109925 IPI:IPI00716629 UniGene:Bt.44371
ProteinModelPortal:Q5BIS6 SMR:Q5BIS6 STRING:Q5BIS6 PRIDE:Q5BIS6
HOVERGEN:HBG108655 InParanoid:Q5BIS6 OrthoDB:EOG4DV5M7
InterPro:IPR023257 PRINTS:PR02034 Uniprot:Q5BIS6
Length = 455
Score = 151 (58.2 bits), Expect = 9.4e-18, Sum P(2) = 9.4e-18
Identities = 32/90 (35%), Positives = 45/90 (50%)
Query: 30 DTSRPTPPSPS----QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGS--KYVCLADK 83
+ R P+P +LC VCGD A+ HY V +CEGCKGFF+R+V +G +Y C
Sbjct: 65 ERKRKKGPAPKMLGDELCQVCGDTASGFHYNVLSCEGCKGFFRRSVIRGGAGRYACRGGG 124
Query: 84 ACPVDXXXXXXXXXXXXXXCLQVGMVKEVV 113
C +D C + GM ++ V
Sbjct: 125 TCQMDAFMRRKCQQCRLRKCKEAGMREQCV 154
Score = 132 (51.5 bits), Expect = 9.4e-18, Sum P(2) = 9.4e-18
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ +L A R
Sbjct: 257 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNH 316
Query: 280 EDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
E + F K R+ +++N I EF +++ + +D + +A L A+ +
Sbjct: 317 ETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINI 372
Score = 81 (33.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYRE 211
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ E
Sbjct: 257 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLE 309
>UNIPROTKB|E2R2K1 [details] [associations]
symbol:NR1H2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 InterPro:IPR023257
PRINTS:PR02034 Ensembl:ENSCAFT00000005346 Uniprot:E2R2K1
Length = 457
Score = 151 (58.2 bits), Expect = 9.5e-18, Sum P(2) = 9.5e-18
Identities = 32/93 (34%), Positives = 47/93 (50%)
Query: 30 DTSRPTPPSPS----QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGS--KYVCLADK 83
+ R P+P +LC VCGD A+ HY V +CEGCKGFF+R+V +G +Y C
Sbjct: 68 ERKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGG 127
Query: 84 ACPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTD 116
C +D C + GM ++ V ++
Sbjct: 128 TCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSE 160
Score = 132 (51.5 bits), Expect = 9.5e-18, Sum P(2) = 9.5e-18
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ +L A R
Sbjct: 248 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNH 307
Query: 280 EDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
E + F K R+ +++N I EF +++ + +D + +A L A+ +
Sbjct: 308 ETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINI 363
Score = 81 (33.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYRE 211
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ E
Sbjct: 248 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLE 300
>UNIPROTKB|F6XDJ5 [details] [associations]
symbol:NR1H2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00680000099585 InterPro:IPR023257 PRINTS:PR02034
OMA:DEASSAC Ensembl:ENSCAFT00000005346 EMBL:AAEX03000791
Uniprot:F6XDJ5
Length = 457
Score = 151 (58.2 bits), Expect = 9.5e-18, Sum P(2) = 9.5e-18
Identities = 32/93 (34%), Positives = 47/93 (50%)
Query: 30 DTSRPTPPSPS----QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGS--KYVCLADK 83
+ R P+P +LC VCGD A+ HY V +CEGCKGFF+R+V +G +Y C
Sbjct: 70 ERKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGG 129
Query: 84 ACPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTD 116
C +D C + GM ++ V ++
Sbjct: 130 TCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSE 162
Score = 132 (51.5 bits), Expect = 9.5e-18, Sum P(2) = 9.5e-18
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ +L A R
Sbjct: 259 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNH 318
Query: 280 EDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
E + F K R+ +++N I EF +++ + +D + +A L A+ +
Sbjct: 319 ETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINI 374
Score = 81 (33.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYRE 211
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ E
Sbjct: 259 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLE 311
>UNIPROTKB|F1RH38 [details] [associations]
symbol:NR1H2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090340 "positive regulation of secretion of lysosomal
enzymes" evidence=IEA] [GO:0090187 "positive regulation of
pancreatic juice secretion" evidence=IEA] [GO:0090108 "positive
regulation of high-density lipoprotein particle assembly"
evidence=IEA] [GO:0051006 "positive regulation of lipoprotein
lipase activity" evidence=IEA] [GO:0048550 "negative regulation of
pinocytosis" evidence=IEA] [GO:0046965 "retinoid X receptor
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0045723 "positive regulation of fatty acid biosynthetic
process" evidence=IEA] [GO:0044255 "cellular lipid metabolic
process" evidence=IEA] [GO:0042632 "cholesterol homeostasis"
evidence=IEA] [GO:0032369 "negative regulation of lipid transport"
evidence=IEA] [GO:0032270 "positive regulation of cellular protein
metabolic process" evidence=IEA] [GO:0010887 "negative regulation
of cholesterol storage" evidence=IEA] [GO:0010884 "positive
regulation of lipid storage" evidence=IEA] [GO:0010875 "positive
regulation of cholesterol efflux" evidence=IEA] [GO:0010867
"positive regulation of triglyceride biosynthetic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0044255 GO:GO:0010887 GO:GO:0010875
GO:GO:0051006 GO:GO:0010867 GO:GO:0032270 GO:GO:0045723
GeneTree:ENSGT00680000099585 GO:GO:0032369 GO:GO:0048550
InterPro:IPR023257 PRINTS:PR02034 OMA:DEASSAC EMBL:FP102476
Ensembl:ENSSSCT00000003566 Uniprot:F1RH38
Length = 458
Score = 151 (58.2 bits), Expect = 9.6e-18, Sum P(2) = 9.6e-18
Identities = 32/90 (35%), Positives = 45/90 (50%)
Query: 30 DTSRPTPPSPS----QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGS--KYVCLADK 83
+ R P+P +LC VCGD A+ HY V +CEGCKGFF+R+V +G +Y C
Sbjct: 69 ERKRKKGPAPKMLGDELCQVCGDTASGFHYNVLSCEGCKGFFRRSVIRGGAGRYACRGGG 128
Query: 84 ACPVDXXXXXXXXXXXXXXCLQVGMVKEVV 113
C +D C + GM ++ V
Sbjct: 129 TCQMDAFMRRKCQQCRLRKCKEAGMREQCV 158
Score = 132 (51.5 bits), Expect = 9.6e-18, Sum P(2) = 9.6e-18
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ +L A R
Sbjct: 260 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNH 319
Query: 280 EDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
E + F K R+ +++N I EF +++ + +D + +A L A+ +
Sbjct: 320 ETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINI 375
Score = 81 (33.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYRE 211
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ E
Sbjct: 260 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLE 312
>UNIPROTKB|P55055 [details] [associations]
symbol:NR1H2 "Oxysterols receptor LXR-beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001133
"sequence-specific transcription regulatory region DNA binding RNA
polymerase II transcription factor recruiting transcription factor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0010884 "positive regulation of
lipid storage" evidence=IEA] [GO:0042632 "cholesterol homeostasis"
evidence=IEA] [GO:0044255 "cellular lipid metabolic process"
evidence=IEA] [GO:0045861 "negative regulation of proteolysis"
evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=IEA] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=IEA] [GO:0090108 "positive regulation of
high-density lipoprotein particle assembly" evidence=IEA]
[GO:0090187 "positive regulation of pancreatic juice secretion"
evidence=IEA] [GO:0090340 "positive regulation of secretion of
lysosomal enzymes" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0003677 "DNA binding" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0032270 "positive
regulation of cellular protein metabolic process" evidence=IMP]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IMP] [GO:0045723 "positive regulation of fatty acid
biosynthetic process" evidence=IMP] [GO:0051006 "positive
regulation of lipoprotein lipase activity" evidence=IMP]
[GO:0010745 "negative regulation of macrophage derived foam cell
differentiation" evidence=IC] [GO:0032369 "negative regulation of
lipid transport" evidence=IMP] [GO:0048550 "negative regulation of
pinocytosis" evidence=IMP] [GO:0032376 "positive regulation of
cholesterol transport" evidence=IDA] [GO:0060336 "negative
regulation of interferon-gamma-mediated signaling pathway"
evidence=NAS] [GO:0010887 "negative regulation of cholesterol
storage" evidence=IMP] [GO:0010867 "positive regulation of
triglyceride biosynthetic process" evidence=IMP] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005737 GO:GO:0045892
GO:GO:0005654 GO:GO:0046872 GO:GO:0003677 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0044255
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0010887 GO:GO:0010745
GO:GO:0010875 GO:GO:0051006 GO:GO:0010867 GO:GO:0032270
GO:GO:0048384 GO:GO:0006367 GO:GO:0045723 GO:GO:0060336
eggNOG:NOG285805 GO:GO:0032369 EMBL:AC008655 PDB:1P8D PDB:4DK7
PDB:4DK8 PDBsum:1P8D PDBsum:4DK7 PDBsum:4DK8 PDB:3L0E PDBsum:3L0E
GO:GO:0048550 HOVERGEN:HBG108655 OrthoDB:EOG4DV5M7
InterPro:IPR023257 PRINTS:PR02034 EMBL:U07132 EMBL:AK290855
EMBL:BC007790 EMBL:BC033500 EMBL:BC047750 EMBL:BC074500 EMBL:U14534
IPI:IPI00022730 PIR:JC4014 RefSeq:NP_001243576.1 RefSeq:NP_009052.3
UniGene:Hs.432976 PDB:1PQ6 PDB:1PQ9 PDB:1PQC PDB:1UPV PDB:1UPW
PDB:3KFC PDBsum:1PQ6 PDBsum:1PQ9 PDBsum:1PQC PDBsum:1UPV
PDBsum:1UPW PDBsum:3KFC ProteinModelPortal:P55055 SMR:P55055
DIP:DIP-53004N IntAct:P55055 MINT:MINT-1444220 STRING:P55055
PhosphoSite:P55055 DMDM:296439251 PaxDb:P55055 PRIDE:P55055
DNASU:7376 Ensembl:ENST00000253727 GeneID:7376 KEGG:hsa:7376
CTD:7376 GeneCards:GC19P050879 HGNC:HGNC:7965 MIM:600380
neXtProt:NX_P55055 PharmGKB:PA31750 InParanoid:P55055 KO:K08535
OMA:DEASSAC PhylomeDB:P55055 BindingDB:P55055 ChEMBL:CHEMBL4093
ChiTaRS:NR1H2 EvolutionaryTrace:P55055 GenomeRNAi:7376
NextBio:28886 ArrayExpress:P55055 Bgee:P55055 CleanEx:HS_NR1H2
Genevestigator:P55055 GermOnline:ENSG00000131408 Uniprot:P55055
Length = 460
Score = 151 (58.2 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 32/93 (34%), Positives = 47/93 (50%)
Query: 30 DTSRPTPPSPS----QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGS--KYVCLADK 83
+ R P+P +LC VCGD A+ HY V +CEGCKGFF+R+V +G +Y C
Sbjct: 70 ERKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGG 129
Query: 84 ACPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTD 116
C +D C + GM ++ V ++
Sbjct: 130 TCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSE 162
Score = 132 (51.5 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ +L A R
Sbjct: 262 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNH 321
Query: 280 EDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
E + F K R+ +++N I EF +++ + +D + +A L A+ +
Sbjct: 322 ETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINI 377
Score = 81 (33.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYRE 211
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ E
Sbjct: 262 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLE 314
>UNIPROTKB|A5D9P5 [details] [associations]
symbol:RXRB "Retinoid X receptor, beta" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 GeneTree:ENSGT00690000101777
InterPro:IPR021780 Pfam:PF11825 EMBL:CT737383 EMBL:BX640585
ProteinModelPortal:A5D9P5 SMR:A5D9P5 STRING:A5D9P5
Ensembl:ENSSSCT00000036293 Uniprot:A5D9P5
Length = 414
Score = 197 (74.4 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 34 PTPPSPS---QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
P P P +LCA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C VD
Sbjct: 70 PPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKR 129
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGR 121
CL GM +E V+ + +G+
Sbjct: 130 QRNRCQYCRYQKCLATGMKREAVQEERQRGK 160
Score = 71 (30.1 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS- 300
+A +IP FS L +DQ +L ++ EL + ++R+ ++ G+ + + +
Sbjct: 230 WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAG 289
Query: 301 FG---DDWLNAIL-EFCQSLHLMEIDISAFACLCALTL 334
G D L+ +L E + M +D + CL A+ L
Sbjct: 290 VGAIFDRSLSRVLTELVSKMRDMRMDKTELGCLRAIIL 327
Score = 46 (21.3 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A +IP FS L +DQ +L ++ EL
Sbjct: 230 WAKRIPHFSSLPLDDQVILLRAGWNEL 256
>UNIPROTKB|F1NVB5 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9031 "Gallus gallus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008206
"bile acid metabolic process" evidence=IEA] [GO:0042127 "regulation
of cell proliferation" evidence=IEA] [GO:0042632 "cholesterol
homeostasis" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0045070 "positive regulation
of viral genome replication" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0008206 GO:GO:0005543
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0042632 GO:GO:0042127
GO:GO:0044212 GO:GO:0045070 GeneTree:ENSGT00670000097927
InterPro:IPR016355 PIRSF:PIRSF002530 IPI:IPI00679374 OMA:NTFGLMC
EMBL:AADN02033799 EMBL:AADN02033800 EMBL:AADN02033801
EMBL:AADN02033802 EMBL:AADN02033803 Ensembl:ENSGALT00000003418
ArrayExpress:F1NVB5 Uniprot:F1NVB5
Length = 501
Score = 206 (77.6 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 37/84 (44%), Positives = 48/84 (57%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++ C +D
Sbjct: 44 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 103
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
CL VGM E VR D ++G R +
Sbjct: 104 QKCLSVGMKLEAVRADRMRGGRNK 127
Score = 60 (26.2 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 23/92 (25%), Positives = 38/92 (41%)
Query: 249 FSDLCKEDQELLFQSASLELFVLRLAYR--TRAEDTKLIFCNGVVLEKQQCQRSFGDDWL 306
F +L +DQ L Q+ EL +L YR ++ ++ G ++ G L
Sbjct: 326 FRELKVDDQMKLLQNCWSELLILDHIYRQVVHGKEGSILLVTGQQVDYSVIASQAGAT-L 384
Query: 307 NAILEFCQSL----HLMEIDISAFACLCALTL 334
N ++ Q L ++ D+ F CL L L
Sbjct: 385 NNLMSHAQELVAKLRSLQFDLREFVCLKFLVL 416
>UNIPROTKB|O42101 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG240365 InterPro:IPR016355 PIRSF:PIRSF002530 EMBL:AB002403
IPI:IPI00679374 RefSeq:NP_990409.1 UniGene:Gga.572
ProteinModelPortal:O42101 SMR:O42101 STRING:O42101 GeneID:395961
KEGG:gga:395961 CTD:2494 HOGENOM:HOG000063718 HOVERGEN:HBG106677
InParanoid:O42101 KO:K08027 OrthoDB:EOG470TH1 NextBio:20816026
Uniprot:O42101
Length = 501
Score = 206 (77.6 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 37/84 (44%), Positives = 48/84 (57%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++ C +D
Sbjct: 44 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 103
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
CL VGM E VR D ++G R +
Sbjct: 104 QKCLSVGMKLEAVRADRMRGGRNK 127
Score = 60 (26.2 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 23/92 (25%), Positives = 38/92 (41%)
Query: 249 FSDLCKEDQELLFQSASLELFVLRLAYR--TRAEDTKLIFCNGVVLEKQQCQRSFGDDWL 306
F +L +DQ L Q+ EL +L YR ++ ++ G ++ G L
Sbjct: 326 FRELKVDDQMKLLQNCWSELLILDHIYRQVVHVKEGSILLVTGQQVDYSVIASQAGAT-L 384
Query: 307 NAILEFCQSL----HLMEIDISAFACLCALTL 334
N ++ Q L ++ D+ F CL L L
Sbjct: 385 NNLMSHAQELVAKLRSLQFDLREFVCLKFLVL 416
>UNIPROTKB|P20393 [details] [associations]
symbol:NR1D1 "Nuclear receptor subfamily 1 group D member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0003714 "transcription
corepressor activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0010871 "negative regulation of receptor
biosynthetic process" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0034144 "negative regulation of toll-like
receptor 4 signaling pathway" evidence=IMP] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:2000189 "positive regulation of
cholesterol homeostasis" evidence=IDA] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0003714 GO:GO:0005654 GO:GO:0046872 GO:GO:0007623
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071222
GO:GO:0000122 GO:GO:0044212 GO:GO:0000790 GO:GO:0006367
Pathway_Interaction_DB:circadianpathway Reactome:REACT_24941
eggNOG:NOG324222 GO:GO:0034144 PDB:3N00 PDBsum:3N00 CTD:9572
HOGENOM:HOG000261691 KO:K03728 OMA:SCHQPNS OrthoDB:EOG4DV5KZ
GO:GO:0010871 EMBL:M24898 EMBL:M24900 EMBL:X55066 EMBL:X55067
EMBL:X72631 EMBL:BC047875 EMBL:BC056148 EMBL:M34339 EMBL:M34340
IPI:IPI00023603 PIR:A32286 RefSeq:NP_068370.1 UniGene:Hs.592130
UniGene:Hs.724 PDB:1A6Y PDB:1EF6 PDB:1GA5 PDB:1HLZ PDBsum:1A6Y
PDBsum:1EF6 PDBsum:1GA5 PDBsum:1HLZ ProteinModelPortal:P20393
SMR:P20393 DIP:DIP-48396N IntAct:P20393 STRING:P20393
PhosphoSite:P20393 DMDM:119100 PRIDE:P20393 DNASU:9572
Ensembl:ENST00000246672 GeneID:9572 KEGG:hsa:9572 UCSC:uc002htz.2
GeneCards:GC17M038249 HGNC:HGNC:7962 HPA:HPA007935 MIM:602408
neXtProt:NX_P20393 PharmGKB:PA31748 HOVERGEN:HBG106790
InParanoid:P20393 BindingDB:P20393 ChEMBL:CHEMBL1961783
ChiTaRS:NR1D1 EvolutionaryTrace:P20393 GenomeRNAi:9572
NextBio:35899 ArrayExpress:P20393 Bgee:P20393 CleanEx:HS_NR1D1
Genevestigator:P20393 GermOnline:ENSG00000126368 Uniprot:P20393
Length = 614
Score = 171 (65.3 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL ++ C +
Sbjct: 131 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRF 190
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 191 KKCLSVGMSRDAVR 204
Score = 112 (44.5 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 28/114 (24%), Positives = 56/114 (49%)
Query: 223 EKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAED 281
++I + +S+ T +V + FA IPGF DL + DQ L ++ + E+ ++R A +D
Sbjct: 433 QEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKD 492
Query: 282 TKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
++F + Q+ D L+A+ +F + L+ + + A+ L+
Sbjct: 493 QTVMFLSRTTYSLQELGAMGMGDLLSAMFDFSEKLNSLALTEEELGLFTAVVLV 546
Score = 70 (29.7 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 162 EKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
++I + +S+ T +V + FA IPGF DL + DQ L ++ + E+
Sbjct: 433 QEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEV 479
>UNIPROTKB|Q0GFF5 [details] [associations]
symbol:RXRbeta "Retinoid X receptor beta" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:CT737383
RefSeq:NP_001177175.1 UniGene:Ssc.1598 GeneID:100156801
KEGG:ssc:100156801 EMBL:DQ866835 SMR:Q0GFF5 STRING:Q0GFF5
Ensembl:ENSSSCT00000001642 Uniprot:Q0GFF5
Length = 484
Score = 197 (74.4 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 34 PTPPSPS---QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
P P P +LCA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C VD
Sbjct: 192 PPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKR 251
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGR 121
CL GM +E V+ + +G+
Sbjct: 252 QRNRCQYCRYQKCLATGMKREAVQEERQRGK 282
Score = 74 (31.1 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS- 300
+A +IP FS L +DQ +L ++ EL + ++R+ ++ G+ + + +
Sbjct: 352 WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAG 411
Query: 301 FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
G + + E + M +D + CL A+ L
Sbjct: 412 VGAIFDRVLTELVSKMRDMRMDKTELGCLRAIIL 445
Score = 46 (21.3 bits), Expect = 8.6e-15, Sum P(2) = 8.6e-15
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A +IP FS L +DQ +L ++ EL
Sbjct: 352 WAKRIPHFSSLPLDDQVILLRAGWNEL 378
>MGI|MGI:1352463 [details] [associations]
symbol:Nr1h2 "nuclear receptor subfamily 1, group H, member
2" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001133 "sequence-specific transcription regulatory region DNA
binding RNA polymerase II transcription factor recruiting
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IGI;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=ISO] [GO:0010867 "positive
regulation of triglyceride biosynthetic process" evidence=ISO]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=ISO;IDA] [GO:0010884 "positive regulation of lipid
storage" evidence=IMP] [GO:0010887 "negative regulation of
cholesterol storage" evidence=ISO] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=IDA] [GO:0032270
"positive regulation of cellular protein metabolic process"
evidence=ISO] [GO:0032369 "negative regulation of lipid transport"
evidence=ISO] [GO:0032376 "positive regulation of cholesterol
transport" evidence=ISO] [GO:0042632 "cholesterol homeostasis"
evidence=IDA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0044255 "cellular lipid metabolic process"
evidence=IDA] [GO:0045723 "positive regulation of fatty acid
biosynthetic process" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=ISO;IDA] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=ISO] [GO:0048550 "negative regulation of
pinocytosis" evidence=ISO] [GO:0051006 "positive regulation of
lipoprotein lipase activity" evidence=ISO] [GO:0055088 "lipid
homeostasis" evidence=IMP] [GO:0090108 "positive regulation of
high-density lipoprotein particle assembly" evidence=IDA]
[GO:0090187 "positive regulation of pancreatic juice secretion"
evidence=IMP] [GO:0090340 "positive regulation of secretion of
lysosomal enzymes" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1352463 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0045861 GO:GO:0044255 GO:GO:0042632
GO:GO:0010875 GO:GO:0000122 GO:GO:0046965 GO:GO:0010884
eggNOG:NOG285805 GeneTree:ENSGT00680000099585 HOVERGEN:HBG108655
OrthoDB:EOG4DV5M7 InterPro:IPR023257 PRINTS:PR02034 CTD:7376
KO:K08535 OMA:DEASSAC ChiTaRS:NR1H2 EMBL:U09419 EMBL:AJ132602
EMBL:BC066025 IPI:IPI00119090 PIR:I49021 RefSeq:NP_033499.1
UniGene:Mm.968 ProteinModelPortal:Q60644 SMR:Q60644 DIP:DIP-444N
IntAct:Q60644 STRING:Q60644 PhosphoSite:Q60644 PRIDE:Q60644
Ensembl:ENSMUST00000073488 Ensembl:ENSMUST00000107912
Ensembl:ENSMUST00000167197 GeneID:22260 KEGG:mmu:22260
UCSC:uc009gpz.1 HOGENOM:HOG000220845 InParanoid:Q60644
NextBio:302353 Bgee:Q60644 CleanEx:MM_NR1H2 Genevestigator:Q60644
GermOnline:ENSMUSG00000060601 GO:GO:0090108 GO:GO:0090187
GO:GO:0090340 Uniprot:Q60644
Length = 446
Score = 150 (57.9 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 33/100 (33%), Positives = 50/100 (50%)
Query: 30 DTSRPTPPSPS----QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGS--KYVCLADK 83
+ R P+P +LC VCGD A+ HY V +CEGCKGFF+R+V G +Y C
Sbjct: 61 ERKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVHGGAGRYACRGSG 120
Query: 84 ACPVDXXXXXXXXXXXXXXCLQVGMVKE-VVRTDSLKGRR 122
C +D C + GM ++ V+ + ++ +R
Sbjct: 121 TCQMDAFMRRKCQLCRLRKCKEAGMREQCVLSEEQIRKKR 160
Score = 132 (51.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ +L A R
Sbjct: 248 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNH 307
Query: 280 EDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
E + F K R+ +++N I EF +++ + +D + +A L A+ +
Sbjct: 308 ETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINI 363
Score = 81 (33.6 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYRE 211
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ E
Sbjct: 248 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLE 300
>UNIPROTKB|Q04752 [details] [associations]
symbol:NR5A1 "Steroidogenic factor 1" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=ISS;IMP] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003707 "steroid hormone receptor activity" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP;IDA]
[GO:2000195 "negative regulation of female gonad development"
evidence=IEA] [GO:2000020 "positive regulation of male gonad
development" evidence=IEA] [GO:0051457 "maintenance of protein
location in nucleus" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042445 "hormone metabolic process" evidence=IEA] [GO:0030325
"adrenal gland development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0010259 "multicellular organismal aging"
evidence=IEA] [GO:0009888 "tissue development" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001553 "luteinization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0030154 GO:GO:0030325
GO:GO:0005543 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003682 GO:GO:0003705 GO:GO:0008584
GO:GO:0051457 GO:GO:0001553 GO:GO:0009888 GO:GO:2000195
eggNOG:NOG240365 GeneTree:ENSGT00670000097927 InterPro:IPR016355
PIRSF:PIRSF002530 HOGENOM:HOG000063718 HOVERGEN:HBG106677
EMBL:D13569 EMBL:S45997 IPI:IPI00707901 PIR:A46077
RefSeq:NP_776828.1 UniGene:Bt.7422 ProteinModelPortal:Q04752
SMR:Q04752 IntAct:Q04752 STRING:Q04752 Ensembl:ENSBTAT00000011869
GeneID:281948 KEGG:bta:281948 CTD:2516 InParanoid:Q04752 KO:K08560
OMA:PFGLMCK OrthoDB:EOG4FJ891 NextBio:20805824 Uniprot:Q04752
Length = 461
Score = 200 (75.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 37/84 (44%), Positives = 46/84 (54%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C ++C +D
Sbjct: 11 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRF 70
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
CL VGM E VR D ++G R +
Sbjct: 71 QKCLTVGMRLEAVRADRMRGGRNK 94
Score = 68 (29.0 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 34/128 (26%), Positives = 50/128 (39%)
Query: 216 EPPIAEPEKIQQFYSLLTTSVDV----IRHFADKIPGFSDLCKEDQELLFQSASLELFVL 271
EP P++ F SLL D I +A + F +L DQ L Q+ EL V
Sbjct: 250 EPAKGRPDQPAPF-SLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQNCWSELLVF 308
Query: 272 RLAYRT--RAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAIL---EFCQSLHLMEIDISAF 326
YR ++ ++ G +E G + +L E LH +++D F
Sbjct: 309 DHIYRQIQHGKEGSILLVTGQEVELTTVAAQAGSLLHSLVLRAQELVLQLHALQLDRQEF 368
Query: 327 ACLCALTL 334
CL L L
Sbjct: 369 VCLKFLIL 376
>UNIPROTKB|F1SGE6 [details] [associations]
symbol:RARG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070384 "Harderian gland development" evidence=IEA]
[GO:0061037 "negative regulation of cartilage development"
evidence=IEA] [GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA] [GO:0060534 "trachea cartilage development"
evidence=IEA] [GO:0048048 "embryonic eye morphogenesis"
evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0032526 "response to retinoic acid" evidence=IEA] [GO:0032331
"negative regulation of chondrocyte differentiation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003430 "growth plate cartilage
chondrocyte growth" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0008285
GO:GO:0009952 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0005667 GO:GO:0000122 GO:GO:0043065
GO:GO:0032526 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0060740 GO:GO:0032331 GO:GO:0003708 CTD:5916 GO:GO:0070384
GO:GO:0061037 GeneTree:ENSGT00680000099662 KO:K08529 GO:GO:0003430
GO:GO:0060534 EMBL:CU550678 RefSeq:XP_001924421.3 UniGene:Ssc.97565
Ensembl:ENSSSCT00000000277 GeneID:397221 KEGG:ssc:397221
OMA:TFNSMRS Uniprot:F1SGE6
Length = 447
Score = 221 (82.9 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 59/196 (30%), Positives = 89/196 (45%)
Query: 32 SRPTPPSPSQL---CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVD 88
S P+PP P ++ C VC D ++ HYGV +CEGCKGFF+R++QK Y C DK C ++
Sbjct: 65 SSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIIN 124
Query: 89 XXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALY 148
C +VGM KE VR D K ++ + LIT +
Sbjct: 125 KVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKK-EVKEEGSLDSYELSPQLEELITKVS 183
Query: 149 REPNPLEPPIAE----------PEKIQ-------QFYSLLTTSVDVIRHFADKIPGFSDL 191
+ P + + ++Q +F L T + I FA ++PGF+ L
Sbjct: 184 KAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGL 243
Query: 192 CKEDQELLFQSASLEL 207
DQ L ++A L++
Sbjct: 244 SIADQITLLKAACLDI 259
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 227 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIF 286
+F L T + I FA ++PGF+ L DQ L ++A L++ +LR+ R E + F
Sbjct: 218 KFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTF 277
Query: 287 CNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+G+ L + Q + FG + + F L +E+D + L A+ LI
Sbjct: 278 SDGLTLNRTQMHNAGFGP-LTDLVFAFAGQLLPLEMDDTETGLLSAICLI 326
>UNIPROTKB|G8JKV9 [details] [associations]
symbol:NR1H2 "Oxysterols receptor LXR-beta" species:9913
"Bos taurus" [GO:0010875 "positive regulation of cholesterol
efflux" evidence=IEA] [GO:0010867 "positive regulation of
triglyceride biosynthetic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0090340 "positive
regulation of secretion of lysosomal enzymes" evidence=IEA]
[GO:0090187 "positive regulation of pancreatic juice secretion"
evidence=IEA] [GO:0090108 "positive regulation of high-density
lipoprotein particle assembly" evidence=IEA] [GO:0051006 "positive
regulation of lipoprotein lipase activity" evidence=IEA]
[GO:0048550 "negative regulation of pinocytosis" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0045723 "positive regulation of
fatty acid biosynthetic process" evidence=IEA] [GO:0044255
"cellular lipid metabolic process" evidence=IEA] [GO:0042632
"cholesterol homeostasis" evidence=IEA] [GO:0032369 "negative
regulation of lipid transport" evidence=IEA] [GO:0032270 "positive
regulation of cellular protein metabolic process" evidence=IEA]
[GO:0010887 "negative regulation of cholesterol storage"
evidence=IEA] [GO:0010884 "positive regulation of lipid storage"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0044255 GO:GO:0010887
GO:GO:0010875 GO:GO:0051006 GO:GO:0010867 GO:GO:0032270
GO:GO:0045723 GeneTree:ENSGT00680000099585 GO:GO:0032369
GO:GO:0048550 InterPro:IPR023257 PRINTS:PR02034 OMA:DEASSAC
EMBL:DAAA02047498 Ensembl:ENSBTAT00000004229 Uniprot:G8JKV9
Length = 498
Score = 151 (58.2 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 32/90 (35%), Positives = 45/90 (50%)
Query: 30 DTSRPTPPSPS----QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGS--KYVCLADK 83
+ R P+P +LC VCGD A+ HY V +CEGCKGFF+R+V +G +Y C
Sbjct: 65 ERKRKKGPAPKMLGDELCQVCGDTASGFHYNVLSCEGCKGFFRRSVIRGGAGRYACRGGG 124
Query: 84 ACPVDXXXXXXXXXXXXXXCLQVGMVKEVV 113
C +D C + GM ++ V
Sbjct: 125 TCQMDAFMRRKCQQCRLRKCKEAGMREQCV 154
Score = 132 (51.5 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ +L A R
Sbjct: 257 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNH 316
Query: 280 EDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
E + F K R+ +++N I EF +++ + +D + +A L A+ +
Sbjct: 317 ETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINI 372
Score = 81 (33.6 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYRE 211
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ E
Sbjct: 257 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLE 309
>ZFIN|ZDB-GENE-030131-4652 [details] [associations]
symbol:nr5a5 "nuclear receptor subfamily 5, group
A, member 5" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA;NAS;IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-030131-4652 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HSSP:P03372 InterPro:IPR016355 PIRSF:PIRSF002530 HOVERGEN:HBG106677
EMBL:AF327373 IPI:IPI00508517 RefSeq:NP_999944.1 UniGene:Dr.11921
ProteinModelPortal:Q98ST8 SMR:Q98ST8 GeneID:407626 KEGG:dre:407626
CTD:407626 InParanoid:Q98ST8 NextBio:20818501 ArrayExpress:Q98ST8
Uniprot:Q98ST8
Length = 537
Score = 202 (76.2 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 39/95 (41%), Positives = 52/95 (54%)
Query: 33 RPTPPSPS---QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDX 89
+P P S + + C VCGD + HYG+ TCE CKGFFKR+VQ +Y C + CP+D
Sbjct: 38 KPDPESSATQEEGCPVCGDRVSGYHYGLLTCESCKGFFKRSVQNNKRYTCAEAQNCPMDL 97
Query: 90 XXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGR 124
C+ VGM KE VR D ++G R +
Sbjct: 98 AQRKRCPYCRFQKCVAVGMKKEAVRADRMRGGRNK 132
Score = 56 (24.8 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 26/92 (28%), Positives = 38/92 (41%)
Query: 249 FSDLCKEDQELLFQSASLELFVLRLAYRTRA--EDTKLIFCNGVVLEKQQCQRSFGDDWL 306
F +L +DQ +L QS EL VL R A D + G +E G L
Sbjct: 362 FKELKVDDQMVLLQSCWSELLVLDHLCRQVAYGRDGSICLITGQQIEASTILSQAGVT-L 420
Query: 307 NAILEFCQSL----HLMEIDISAFACLCALTL 334
++++ Q L +++D F CL L L
Sbjct: 421 SSLVSRAQDLVTKLRSLQLDREEFVCLKYLVL 452
Score = 40 (19.1 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 159 AEPEKIQQFYSLLTT--SVDVIRHFADKIPGFSDLCKEDQELLF 200
AEP++ Q +L + R D++ FS +CK + LF
Sbjct: 307 AEPDEKQLCMRVLASLQREQACRGKHDRLNTFSIMCKMADQTLF 350
Score = 40 (19.1 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 220 AEPEKIQQFYSLLTT--SVDVIRHFADKIPGFSDLCKEDQELLF 261
AEP++ Q +L + R D++ FS +CK + LF
Sbjct: 307 AEPDEKQLCMRVLASLQREQACRGKHDRLNTFSIMCKMADQTLF 350
>UNIPROTKB|Q08DD4 [details] [associations]
symbol:RARG "RARG protein" species:9913 "Bos taurus"
[GO:0070384 "Harderian gland development" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IEA]
[GO:0060534 "trachea cartilage development" evidence=IEA]
[GO:0048048 "embryonic eye morphogenesis" evidence=IEA] [GO:0046965
"retinoid X receptor binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003430 "growth plate cartilage
chondrocyte growth" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0008285
GO:GO:0009952 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0005667 GO:GO:0000122 GO:GO:0043065
GO:GO:0032526 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0060740 GO:GO:0032331 HOVERGEN:HBG005606 GO:GO:0003708
CTD:5916 GO:GO:0070384 GO:GO:0061037 eggNOG:NOG297448
GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7
KO:K08529 OMA:RSPQPDQ GO:GO:0003430 GO:GO:0060534 EMBL:DAAA02012865
EMBL:BC123809 IPI:IPI00707092 RefSeq:NP_001124228.1
UniGene:Bt.53782 SMR:Q08DD4 STRING:Q08DD4
Ensembl:ENSBTAT00000009984 GeneID:540425 KEGG:bta:540425
InParanoid:Q08DD4 NextBio:20878630 Uniprot:Q08DD4
Length = 458
Score = 221 (82.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 59/196 (30%), Positives = 89/196 (45%)
Query: 32 SRPTPPSPSQL---CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVD 88
S P+PP P ++ C VC D ++ HYGV +CEGCKGFF+R++QK Y C DK C ++
Sbjct: 76 SSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIIN 135
Query: 89 XXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALY 148
C +VGM KE VR D K ++ + LIT +
Sbjct: 136 KVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKK-EVKEEGSLDSYELSPQLEELITKVS 194
Query: 149 REPNPLEPPIAE----------PEKIQ-------QFYSLLTTSVDVIRHFADKIPGFSDL 191
+ P + + ++Q +F L T + I FA ++PGF+ L
Sbjct: 195 KAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGL 254
Query: 192 CKEDQELLFQSASLEL 207
DQ L ++A L++
Sbjct: 255 SIADQITLLKAACLDI 270
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 227 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIF 286
+F L T + I FA ++PGF+ L DQ L ++A L++ +LR+ R E + F
Sbjct: 229 KFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTF 288
Query: 287 CNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+G+ L + Q + FG + + F L +E+D + L A+ LI
Sbjct: 289 SDGLTLNRTQMHNAGFGP-LTDLVFAFAGQLLPLEMDDTETGLLSAICLI 337
>UNIPROTKB|F1PN60 [details] [associations]
symbol:RARG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708 CTD:5916
GeneTree:ENSGT00680000099662 KO:K08529 OMA:RSPQPDQ
EMBL:AAEX03014990 EMBL:AAEX03014987 EMBL:AAEX03014988
EMBL:AAEX03014989 RefSeq:XP_849260.2 Ensembl:ENSCAFT00000011309
GeneID:486508 KEGG:cfa:486508 Uniprot:F1PN60
Length = 458
Score = 221 (82.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 59/196 (30%), Positives = 89/196 (45%)
Query: 32 SRPTPPSPSQL---CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVD 88
S P+PP P ++ C VC D ++ HYGV +CEGCKGFF+R++QK Y C DK C ++
Sbjct: 76 SSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIIN 135
Query: 89 XXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALY 148
C +VGM KE VR D K ++ + LIT +
Sbjct: 136 KVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKK-EVKEEGSLDSYELSPQLEELITKVS 194
Query: 149 REPNPLEPPIAE----------PEKIQ-------QFYSLLTTSVDVIRHFADKIPGFSDL 191
+ P + + ++Q +F L T + I FA ++PGF+ L
Sbjct: 195 KAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGL 254
Query: 192 CKEDQELLFQSASLEL 207
DQ L ++A L++
Sbjct: 255 SIADQITLLKAACLDI 270
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 227 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIF 286
+F L T + I FA ++PGF+ L DQ L ++A L++ +LR+ R E + F
Sbjct: 229 KFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTF 288
Query: 287 CNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+G+ L + Q + FG + + F L +E+D + L A+ LI
Sbjct: 289 SDGLTLNRTQMHNAGFGP-LTDLVFAFAGQLLPLEMDDTETGLLSAICLI 337
>MGI|MGI:98215 [details] [associations]
symbol:Rxrb "retinoid X receptor beta" species:10090 "Mus
musculus" [GO:0001701 "in utero embryonic development"
evidence=IGI] [GO:0001893 "maternal placenta development"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030375 "thyroid hormone receptor
coactivator activity" evidence=ISO] [GO:0031641 "regulation of
myelination" evidence=ISO] [GO:0042809 "vitamin D receptor binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IGI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046966 "thyroid
hormone receptor binding" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048384 "retinoic
acid receptor signaling pathway" evidence=IDA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IGI;IMP]
[GO:0060038 "cardiac muscle cell proliferation" evidence=IGI]
[GO:0071300 "cellular response to retinoic acid" evidence=IDA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:98215 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0001701 GO:GO:0045944 GO:GO:0044212 GO:GO:0001893
EMBL:AF100956 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:D21831
EMBL:BC049773 EMBL:M84818 EMBL:M26804 EMBL:X66224 IPI:IPI00226615
IPI:IPI00890271 PIR:A34418 PIR:D41727 PIR:I84718 PIR:S26669
RefSeq:NP_001192145.1 RefSeq:NP_035436.1 UniGene:Mm.1243
ProteinModelPortal:P28704 SMR:P28704 IntAct:P28704 STRING:P28704
PhosphoSite:P28704 PaxDb:P28704 PRIDE:P28704
Ensembl:ENSMUST00000116612 GeneID:20182 KEGG:mmu:20182
UCSC:uc008ixs.1 InParanoid:P28704 BindingDB:P28704
ChEMBL:CHEMBL4047 NextBio:297709 Bgee:P28704 CleanEx:MM_RXRB
Genevestigator:P28704 GermOnline:ENSMUSG00000039656 Uniprot:P28704
Length = 520
Score = 197 (74.4 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 34 PTPPSPS---QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
P P P +LCA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C VD
Sbjct: 180 PPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKR 239
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGR 121
CL GM +E V+ + +G+
Sbjct: 240 QRNRCQYCRYQKCLATGMKREAVQEERQRGK 270
Score = 74 (31.1 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS- 300
+A +IP FS L +DQ +L ++ EL + ++R+ ++ G+ + + +
Sbjct: 340 WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAG 399
Query: 301 FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
G + + E + M +D + CL A+ L
Sbjct: 400 VGAIFDRVLTELVSKMRDMRMDKTELGCLRAIIL 433
Score = 46 (21.3 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A +IP FS L +DQ +L ++ EL
Sbjct: 340 WAKRIPHFSSLPLDDQVILLRAGWNEL 366
>UNIPROTKB|P79387 [details] [associations]
symbol:NR5A1 "Steroidogenic factor 1" species:9823 "Sus
scrofa" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0008289
eggNOG:NOG240365 EMBL:AP009124 InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 CTD:2516 KO:K08560
OrthoDB:EOG4FJ891 EMBL:U84399 RefSeq:NP_999344.1 UniGene:Ssc.82462
UniGene:Ssc.82473 ProteinModelPortal:P79387 SMR:P79387
STRING:P79387 GeneID:397368 KEGG:ssc:397368 Uniprot:P79387
Length = 461
Score = 200 (75.5 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 37/84 (44%), Positives = 46/84 (54%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C ++C +D
Sbjct: 11 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRF 70
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
CL VGM E VR D ++G R +
Sbjct: 71 QKCLTVGMRLEAVRADRMRGGRNK 94
Score = 67 (28.6 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 34/128 (26%), Positives = 49/128 (38%)
Query: 216 EPPIAEPEKIQQFYSLLTTSVDV----IRHFADKIPGFSDLCKEDQELLFQSASLELFVL 271
EP P++ F SLL D I +A + F +L DQ L Q+ EL V
Sbjct: 250 EPAKGRPDQPAPF-SLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQNCWSELLVF 308
Query: 272 RLAYRT--RAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAIL---EFCQSLHLMEIDISAF 326
YR ++ ++ G +E G +L E LH +++D F
Sbjct: 309 DHIYRQIQHGKEGSILLVTGQEVELTTVAAQAGSLLHGLVLRAQELVLQLHALQLDRQEF 368
Query: 327 ACLCALTL 334
CL L L
Sbjct: 369 VCLKFLIL 376
>RGD|61906 [details] [associations]
symbol:Nr1h2 "nuclear receptor subfamily 1, group H, member 2"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001133 "sequence-specific transcription regulatory region DNA
binding RNA polymerase II transcription factor recruiting
transcription factor activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA;ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IDA] [GO:0010629 "negative regulation of gene expression"
evidence=IDA] [GO:0010867 "positive regulation of triglyceride
biosynthetic process" evidence=IEA;ISO] [GO:0010875 "positive
regulation of cholesterol efflux" evidence=IEA;ISO] [GO:0010884
"positive regulation of lipid storage" evidence=IEA;ISO] [GO:0010887
"negative regulation of cholesterol storage" evidence=IEA;ISO]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=ISO] [GO:0032270 "positive regulation of cellular protein
metabolic process" evidence=IEA;ISO] [GO:0032369 "negative
regulation of lipid transport" evidence=IEA;ISO] [GO:0032376
"positive regulation of cholesterol transport" evidence=ISO]
[GO:0042632 "cholesterol homeostasis" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0044255
"cellular lipid metabolic process" evidence=IEA;ISO] [GO:0045723
"positive regulation of fatty acid biosynthetic process"
evidence=IEA;ISO] [GO:0045861 "negative regulation of proteolysis"
evidence=IEA;ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046965 "retinoid X receptor binding" evidence=ISO;IDA;IPI]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=IDA]
[GO:0048550 "negative regulation of pinocytosis" evidence=IEA;ISO]
[GO:0051006 "positive regulation of lipoprotein lipase activity"
evidence=IEA;ISO] [GO:0055088 "lipid homeostasis" evidence=ISO]
[GO:0090108 "positive regulation of high-density lipoprotein
particle assembly" evidence=IEA;ISO] [GO:0090187 "positive
regulation of pancreatic juice secretion" evidence=IEA;ISO]
[GO:0090340 "positive regulation of secretion of lysosomal enzymes"
evidence=IEA;ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:61906 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0044255 GO:GO:0010887 GO:GO:0010875 GO:GO:0051006
GO:GO:0010867 GO:GO:0010628 GO:GO:0010629 GO:GO:0032270
GO:GO:0048384 GO:GO:0045723 GO:GO:0046965 GO:GO:0001133
eggNOG:NOG285805 GeneTree:ENSGT00680000099585 GO:GO:0032369
GO:GO:0048550 HOVERGEN:HBG108655 OrthoDB:EOG4DV5M7
InterPro:IPR023257 PRINTS:PR02034 CTD:7376 KO:K08535 OMA:DEASSAC
HOGENOM:HOG000220845 EMBL:U20389 EMBL:U14533 IPI:IPI00208192
PIR:I59354 RefSeq:NP_113814.1 UniGene:Rn.786
ProteinModelPortal:Q62755 SMR:Q62755 STRING:Q62755
PhosphoSite:Q62755 Ensembl:ENSRNOT00000026862 GeneID:58851
KEGG:rno:58851 UCSC:RGD:61906 InParanoid:Q62755 NextBio:611431
ArrayExpress:Q62755 Genevestigator:Q62755
GermOnline:ENSRNOG00000019812 Uniprot:Q62755
Length = 446
Score = 149 (57.5 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 32/93 (34%), Positives = 46/93 (49%)
Query: 30 DTSRPTPPSPS----QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGS--KYVCLADK 83
+ R P+P +LC VCGD A+ HY V +CEGCKGFF+R+V G +Y C
Sbjct: 61 ERKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVHGGAGRYACRGSG 120
Query: 84 ACPVDXXXXXXXXXXXXXXCLQVGMVKEVVRTD 116
C +D C + GM ++ V ++
Sbjct: 121 TCQMDAFMRRKCQLCRLRKCKEAGMREQCVLSE 153
Score = 132 (51.5 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ +L A R
Sbjct: 248 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNH 307
Query: 280 EDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
E + F K R+ +++N I EF +++ + +D + +A L A+ +
Sbjct: 308 ETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINI 363
Score = 81 (33.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYRE 211
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ E
Sbjct: 248 ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLE 300
>UNIPROTKB|A6H7I6 [details] [associations]
symbol:RXRB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 OMA:FLPERHA EMBL:DAAA02054891
EMBL:BC146260 IPI:IPI00709103 UniGene:Bt.57603 SMR:A6H7I6
STRING:A6H7I6 Ensembl:ENSBTAT00000000860 InParanoid:A6H7I6
Uniprot:A6H7I6
Length = 532
Score = 197 (74.4 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 34 PTPPSPS---QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
P P P +LCA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C VD
Sbjct: 192 PPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKR 251
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGR 121
CL GM +E V+ + +G+
Sbjct: 252 QRNRCQYCRYQKCLATGMKREAVQEERQRGK 282
Score = 74 (31.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS- 300
+A +IP FS L +DQ +L ++ EL + ++R+ ++ G+ + + +
Sbjct: 352 WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAG 411
Query: 301 FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
G + + E + M +D + CL A+ L
Sbjct: 412 VGAIFDRVLTELVSKMRDMRMDKTELGCLRAIIL 445
Score = 46 (21.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A +IP FS L +DQ +L ++ EL
Sbjct: 352 WAKRIPHFSSLPLDDQVILLRAGWNEL 378
>UNIPROTKB|A5D9P3 [details] [associations]
symbol:RXRB "Retinoid X receptor, beta" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:CT737383
EMBL:BX640585 RefSeq:NP_001177175.1 UniGene:Ssc.1598
ProteinModelPortal:A5D9P3 SMR:A5D9P3 STRING:A5D9P3
Ensembl:ENSSSCT00000036123 GeneID:100156801 KEGG:ssc:100156801
OMA:FLPERHA Uniprot:A5D9P3
Length = 532
Score = 197 (74.4 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 34 PTPPSPS---QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
P P P +LCA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C VD
Sbjct: 192 PPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKR 251
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGR 121
CL GM +E V+ + +G+
Sbjct: 252 QRNRCQYCRYQKCLATGMKREAVQEERQRGK 282
Score = 74 (31.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS- 300
+A +IP FS L +DQ +L ++ EL + ++R+ ++ G+ + + +
Sbjct: 352 WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAG 411
Query: 301 FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
G + + E + M +D + CL A+ L
Sbjct: 412 VGAIFDRVLTELVSKMRDMRMDKTELGCLRAIIL 445
Score = 46 (21.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A +IP FS L +DQ +L ++ EL
Sbjct: 352 WAKRIPHFSSLPLDDQVILLRAGWNEL 378
>UNIPROTKB|Q5TJF7 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AJ630366 HOVERGEN:HBG005606 HOGENOM:HOG000260821
InterPro:IPR021780 Pfam:PF11825 ProteinModelPortal:Q5TJF7
SMR:Q5TJF7 STRING:Q5TJF7 Uniprot:Q5TJF7
Length = 533
Score = 197 (74.4 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 34 PTPPSPS---QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
P P P +LCA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C VD
Sbjct: 193 PPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKR 252
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGR 121
CL GM +E V+ + +G+
Sbjct: 253 QRNRCQYCRYQKCLATGMKREAVQEERQRGK 283
Score = 74 (31.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS- 300
+A +IP FS L +DQ +L ++ EL + ++R+ ++ G+ + + +
Sbjct: 353 WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAG 412
Query: 301 FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
G + + E + M +D + CL A+ L
Sbjct: 413 VGAIFDRVLTELVSKMRDMRMDKTELGCLRAIIL 446
Score = 46 (21.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A +IP FS L +DQ +L ++ EL
Sbjct: 353 WAKRIPHFSSLPLDDQVILLRAGWNEL 379
>UNIPROTKB|P28702 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IEA]
[GO:0060038 "cardiac muscle cell proliferation" evidence=IEA]
[GO:0071300 "cellular response to retinoic acid" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0005654
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071300 GO:GO:0045944 Pathway_Interaction_DB:rxr_vdr_pathway
GO:GO:0044212 GO:GO:0003713 GO:GO:0030375
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
EMBL:AL031228 GO:GO:0060038 EMBL:AL645940 EMBL:AL662824
EMBL:AL844527 EMBL:CR759733 EMBL:CR936877 HOVERGEN:HBG005606
DrugBank:DB00307 GO:GO:0055012 PDB:1UHL PDBsum:1UHL
DrugBank:DB00523 DrugBank:DB00926 DrugBank:DB00210 DrugBank:DB00799
HOGENOM:HOG000260821 OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525
EMBL:M84820 EMBL:X63522 EMBL:AF065396 EMBL:AF120161 EMBL:HQ709179
EMBL:AB209244 EMBL:CR354565 EMBL:BC001167 EMBL:X66424
IPI:IPI00426305 IPI:IPI00607575 PIR:S37781 RefSeq:NP_068811.1
UniGene:Hs.388034 PDB:1H9U PDBsum:1H9U ProteinModelPortal:P28702
SMR:P28702 IntAct:P28702 MINT:MINT-1365658 STRING:P28702
PhosphoSite:P28702 DMDM:1350911 PaxDb:P28702 PRIDE:P28702
DNASU:6257 Ensembl:ENST00000374680 Ensembl:ENST00000374685
Ensembl:ENST00000383217 Ensembl:ENST00000415157
Ensembl:ENST00000415909 Ensembl:ENST00000431820
Ensembl:ENST00000436753 GeneID:6257 KEGG:hsa:6257 UCSC:uc003odb.3
CTD:6257 GeneCards:GC06M033161 HGNC:HGNC:10478 HPA:CAB002003
MIM:180246 neXtProt:NX_P28702 PharmGKB:PA34891 PhylomeDB:P28702
BindingDB:P28702 ChEMBL:CHEMBL1870 ChiTaRS:RXRB
EvolutionaryTrace:P28702 GenomeRNAi:6257 NextBio:24299
ArrayExpress:P28702 Bgee:P28702 CleanEx:HS_RXRB
Genevestigator:P28702 GermOnline:ENSG00000204231 Uniprot:P28702
Length = 533
Score = 197 (74.4 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 34 PTPPSPS---QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
P P P +LCA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C VD
Sbjct: 193 PPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKR 252
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGR 121
CL GM +E V+ + +G+
Sbjct: 253 QRNRCQYCRYQKCLATGMKREAVQEERQRGK 283
Score = 74 (31.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS- 300
+A +IP FS L +DQ +L ++ EL + ++R+ ++ G+ + + +
Sbjct: 353 WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAG 412
Query: 301 FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
G + + E + M +D + CL A+ L
Sbjct: 413 VGAIFDRVLTELVSKMRDMRMDKTELGCLRAIIL 446
Score = 46 (21.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A +IP FS L +DQ +L ++ EL
Sbjct: 353 WAKRIPHFSSLPLDDQVILLRAGWNEL 379
>UNIPROTKB|F1SA88 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0045893 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 OMA:RMSSKDR EMBL:CU463901
EMBL:CU929762 ProteinModelPortal:F1SA88 SMR:F1SA88
Ensembl:ENSSSCT00000011830 Uniprot:F1SA88
Length = 396
Score = 142 (55.0 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 203 ASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQ 262
A E Y P+P P ++ + + L + VI +A IPGFS L DQ L Q
Sbjct: 182 AEPEKIYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQ 240
Query: 263 SASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEID 322
SA +E+ +L + YR+ + + +L++ + ++++ Q + + D NAIL+ + M+++
Sbjct: 241 SAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLE 300
Query: 323 ISAFACLCALTL 334
F L A+ L
Sbjct: 301 KEEFVTLKAIAL 312
Score = 138 (53.6 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQ 72
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q
Sbjct: 101 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQ 134
Score = 74 (31.1 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 147 LYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 206
+Y P+P P ++ + + L + VI +A IPGFS L DQ L QSA +E
Sbjct: 187 IYAMPDPTVPD-SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQSAWME 245
Query: 207 L 207
+
Sbjct: 246 I 246
>UNIPROTKB|P13631 [details] [associations]
symbol:RARG "Retinoic acid receptor gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003430 "growth plate cartilage chondrocyte growth"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0031641 "regulation of
myelination" evidence=IEA] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0060534 "trachea
cartilage development" evidence=IEA] [GO:0060740 "prostate gland
epithelium morphogenesis" evidence=IEA] [GO:0061037 "negative
regulation of cartilage development" evidence=IEA] [GO:0070384
"Harderian gland development" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0032526 "response
to retinoic acid" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=IDA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=TAS] [GO:0008361 "regulation of cell
size" evidence=TAS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=ISS] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0043068 "positive regulation
of programmed cell death" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0046965 "retinoid X receptor binding"
evidence=ISS] [GO:0048048 "embryonic eye morphogenesis"
evidence=ISS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0016021
GO:GO:0008285 GO:GO:0009952 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 EMBL:CH471054
GO:GO:0003700 GO:GO:0008361 Pathway_Interaction_DB:rxr_vdr_pathway
GO:GO:0005667 GO:GO:0000122 GO:GO:0043065 GO:GO:0032526
GO:GO:0035264 GO:GO:0035116
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
GO:GO:0048384 GO:GO:0048048 DrugBank:DB00459 GO:GO:0060740
GO:GO:0006367 GO:GO:0060070 GO:GO:0046965 GO:GO:0032331
HOVERGEN:HBG005606 GO:GO:0003708 EMBL:AC021072 CTD:5916
GO:GO:0070384 GO:GO:0061037 DrugBank:DB00523 DrugBank:DB00926
eggNOG:NOG297448 OrthoDB:EOG4F7NK7 DrugBank:DB00210
DrugBank:DB00799 EMBL:M24857 EMBL:M57707 EMBL:M38258 EMBL:AK297023
EMBL:AK297277 EMBL:AK316259 EMBL:AC073573 EMBL:BC093727
EMBL:BC093729 EMBL:M32074 EMBL:X57280 EMBL:AJ250835 EMBL:AY013703
EMBL:AY013704 IPI:IPI00427809 IPI:IPI00465344 IPI:IPI00788710
PIR:A33903 PIR:C35991 RefSeq:NP_000957.1 RefSeq:NP_001036193.1
RefSeq:NP_001230659.1 RefSeq:NP_001230661.1 UniGene:Hs.1497
UniGene:Hs.733399 PDB:1EXA PDB:1EXX PDB:1FCX PDB:1FCY PDB:1FCZ
PDB:1FD0 PDB:2LBD PDB:3LBD PDB:4LBD PDBsum:1EXA PDBsum:1EXX
PDBsum:1FCX PDBsum:1FCY PDBsum:1FCZ PDBsum:1FD0 PDBsum:2LBD
PDBsum:3LBD PDBsum:4LBD ProteinModelPortal:P13631 SMR:P13631
IntAct:P13631 STRING:P13631 PhosphoSite:P13631 DMDM:133498
PaxDb:P13631 PRIDE:P13631 DNASU:5916 Ensembl:ENST00000327550
Ensembl:ENST00000338561 Ensembl:ENST00000394426
Ensembl:ENST00000425354 Ensembl:ENST00000543726 GeneID:5916
KEGG:hsa:5916 UCSC:uc001sce.3 GeneCards:GC12M053604
H-InvDB:HIX0129677 HGNC:HGNC:9866 MIM:180190 neXtProt:NX_P13631
PharmGKB:PA34227 InParanoid:P13631 KO:K08529 OMA:RSPQPDQ
PhylomeDB:P13631 BindingDB:P13631 ChEMBL:CHEMBL2003
EvolutionaryTrace:P13631 GenomeRNAi:5916 NextBio:23030
ArrayExpress:P13631 Bgee:P13631 CleanEx:HS_RARG
Genevestigator:P13631 GermOnline:ENSG00000172819 GO:GO:0003430
GO:GO:0060534 Uniprot:P13631
Length = 454
Score = 220 (82.5 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 59/196 (30%), Positives = 89/196 (45%)
Query: 32 SRPTPPSPSQL---CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVD 88
S P+PP P ++ C VC D ++ HYGV +CEGCKGFF+R++QK Y C DK C ++
Sbjct: 76 SSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIIN 135
Query: 89 XXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALY 148
C +VGM KE VR D K ++ + LIT +
Sbjct: 136 KVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKK-EVKEEGSPDSYELSPQLEELITKVS 194
Query: 149 REPNPLEPPIAE----------PEKIQ-------QFYSLLTTSVDVIRHFADKIPGFSDL 191
+ P + + ++Q +F L T + I FA ++PGF+ L
Sbjct: 195 KAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGL 254
Query: 192 CKEDQELLFQSASLEL 207
DQ L ++A L++
Sbjct: 255 SIADQITLLKAACLDI 270
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 227 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIF 286
+F L T + I FA ++PGF+ L DQ L ++A L++ +LR+ R E + F
Sbjct: 229 KFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTF 288
Query: 287 CNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+G+ L + Q + FG + + F L +E+D + L A+ LI
Sbjct: 289 SDGLTLNRTQMHNAGFGP-LTDLVFAFAGQLLPLEMDDTETGLLSAICLI 337
>MGI|MGI:97858 [details] [associations]
symbol:Rarg "retinoic acid receptor, gamma" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0002063 "chondrocyte
development" evidence=IMP] [GO:0003417 "growth plate cartilage
development" evidence=IGI] [GO:0003430 "growth plate cartilage
chondrocyte growth" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IC;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003708 "retinoic acid
receptor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0010468 "regulation of gene expression" evidence=IGI]
[GO:0010628 "positive regulation of gene expression" evidence=IDA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IMP] [GO:0032526 "response to retinoic acid" evidence=ISO]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IGI]
[GO:0035264 "multicellular organism growth" evidence=IGI]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IGI] [GO:0043068 "positive regulation of programmed cell
death" evidence=IGI] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IC;IGI;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046965 "retinoid
X receptor binding" evidence=IMP] [GO:0048048 "embryonic eye
morphogenesis" evidence=IGI] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO;IMP] [GO:0048608 "reproductive
structure development" evidence=IMP] [GO:0048732 "gland
development" evidence=IMP] [GO:0060173 "limb development"
evidence=IMP] [GO:0060348 "bone development" evidence=IMP]
[GO:0060349 "bone morphogenesis" evidence=IGI;IMP] [GO:0060429
"epithelium development" evidence=IMP] [GO:0060534 "trachea
cartilage development" evidence=IMP] [GO:0060740 "prostate gland
epithelium morphogenesis" evidence=IMP] [GO:0061037 "negative
regulation of cartilage development" evidence=IMP] [GO:0070384
"Harderian gland development" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:97858
GO:GO:0008285 GO:GO:0009952 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0005667 GO:GO:0000122 GO:GO:0043065 GO:GO:0032526
GO:GO:0035264 GO:GO:0035116 GO:GO:0048384 GO:GO:0048048
GO:GO:0060740 GO:GO:0046965 GO:GO:0032331 HOVERGEN:HBG005606
GO:GO:0003708 CTD:5916 GO:GO:0070384 GO:GO:0061037 eggNOG:NOG297448
GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7
KO:K08529 OMA:RSPQPDQ GO:GO:0003430 GO:GO:0060534 EMBL:X15848
EMBL:M34475 EMBL:M34476 EMBL:AK148064 EMBL:BC012923 EMBL:BC013709
EMBL:M32068 EMBL:M32069 EMBL:M32070 IPI:IPI00122863 IPI:IPI00320178
IPI:IPI00885347 PIR:B34714 PIR:S05052 RefSeq:NP_001036192.1
RefSeq:NP_035374.3 UniGene:Mm.1273 ProteinModelPortal:P18911
SMR:P18911 DIP:DIP-42822N MINT:MINT-2834553 STRING:P18911
PhosphoSite:P18911 PRIDE:P18911 Ensembl:ENSMUST00000043172
Ensembl:ENSMUST00000063339 GeneID:19411 KEGG:mmu:19411
UCSC:uc007she.1 InParanoid:P18911 BindingDB:P18911
ChEMBL:CHEMBL4177 NextBio:296533 Bgee:P18911 CleanEx:MM_RARG
Genevestigator:P18911 GermOnline:ENSMUSG00000001288 Uniprot:P18911
Length = 458
Score = 220 (82.5 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 59/196 (30%), Positives = 89/196 (45%)
Query: 32 SRPTPPSPSQL---CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVD 88
S P+PP P ++ C VC D ++ HYGV +CEGCKGFF+R++QK Y C DK C ++
Sbjct: 76 SSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIIN 135
Query: 89 XXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALY 148
C +VGM KE VR D K ++ + LIT +
Sbjct: 136 KVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKK-EVKEEGSPDSYELSPQLEELITKVS 194
Query: 149 REPNPLEPPIAE----------PEKIQ-------QFYSLLTTSVDVIRHFADKIPGFSDL 191
+ P + + ++Q +F L T + I FA ++PGF+ L
Sbjct: 195 KAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGL 254
Query: 192 CKEDQELLFQSASLEL 207
DQ L ++A L++
Sbjct: 255 SIADQITLLKAACLDI 270
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 227 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIF 286
+F L T + I FA ++PGF+ L DQ L ++A L++ +LR+ R E + F
Sbjct: 229 KFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTF 288
Query: 287 CNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+G+ L + Q + FG + + F L +E+D + L A+ LI
Sbjct: 289 SDGLTLNRTQMHNAGFGP-LTDLVFAFAGQLLPLEMDDTETGLLSAICLI 337
>ZFIN|ZDB-GENE-990415-79 [details] [associations]
symbol:nr5a2 "nuclear receptor subfamily 5, group A,
member 2" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;NAS;IDA] [GO:0051216 "cartilage development"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-79 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0051216
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 HSSP:P45448 EMBL:AL954148
EMBL:BC163522 EMBL:AY034061 IPI:IPI00511047 UniGene:Dr.6870
SMR:Q90YL6 STRING:Q90YL6 Ensembl:ENSDART00000127424
InParanoid:Q90YL6 Uniprot:Q90YL6
Length = 517
Score = 206 (77.6 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 36/84 (42%), Positives = 49/84 (58%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
++C VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ +++C +D
Sbjct: 44 EMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCPYCRF 103
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
CL VGM E VR D ++G R +
Sbjct: 104 QKCLTVGMKLEAVRADRMRGGRNK 127
Score = 58 (25.5 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 24/92 (26%), Positives = 39/92 (42%)
Query: 249 FSDLCKEDQELLFQSASLELFVLRLAYRT--RAEDTKLIFCNGVVLEKQQCQRSFGDDWL 306
F +L +DQ L Q+ EL +L +R A++ ++ G ++ G L
Sbjct: 342 FRELKVDDQMKLLQNCWSELLILDHVFRQVMHAKEGSILLVTGQQVDYALIASQAGAT-L 400
Query: 307 NAILEFCQSL----HLMEIDISAFACLCALTL 334
N +L Q L +++D F CL L L
Sbjct: 401 NNLLSHAQELVSKLRSLQLDQREFVCLKFLVL 432
>ZFIN|ZDB-GENE-080403-6 [details] [associations]
symbol:nr1d4b "nuclear receptor subfamily 1, group D,
member 4b" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003708 "retinoic acid
receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-080403-6 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00700000104109 EMBL:CT573157 IPI:IPI00488154
RefSeq:XP_700687.4 UniGene:Dr.89121 Ensembl:ENSDART00000082475
GeneID:571948 KEGG:dre:571948 CTD:571948 NextBio:20890772
Bgee:F1QRU1 Uniprot:F1QRU1
Length = 576
Score = 169 (64.5 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 35/86 (40%), Positives = 49/86 (56%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKY-VCLADKACPVDXXXXXXXXXXXX 100
LC VCGDIA+ HYGV CEGCKGFF+R++Q+ Y +C+ ++ C +
Sbjct: 118 LCKVCGDIASGFHYGVHACEGCKGFFRRSIQQNIHYKMCVKNENCLIMRMNRNRCQHCRF 177
Query: 101 XXCLQVGMVKEVVRTDSL-KGRRGRL 125
CL VGM ++ VR + K + RL
Sbjct: 178 KKCLSVGMSRDAVRFGRIPKREKQRL 203
Score = 111 (44.1 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 226 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLI 285
+ F T +V + FA IPGF L + DQ +L ++ + ++ ++R A++ +
Sbjct: 400 ESFSQCFTPAVKEVVEFAKSIPGFQALSQHDQVMLLKAGTFQVLMVRFCSLFNAKERTVT 459
Query: 286 FCNGVVLEKQQCQRSFG-DDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
F NG R G + L+A+ EF + L M ++ A A+ L+
Sbjct: 460 FLNGQTYPLSYL-RVLGMGNLLDAMFEFSEKLGSMGLEADEMALFMAVVLV 509
Score = 66 (28.3 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 165 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
+ F T +V + FA IPGF L + DQ +L ++ + ++
Sbjct: 400 ESFSQCFTPAVKEVVEFAKSIPGFQALSQHDQVMLLKAGTFQV 442
>UNIPROTKB|P51449 [details] [associations]
symbol:RORC "Nuclear receptor ROR-gamma" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0033077 "T
cell differentiation in thymus" evidence=IEA] [GO:0048535 "lymph
node development" evidence=IEA] [GO:0048537 "mucosal-associated
lymphoid tissue development" evidence=IEA] [GO:0072539 "T-helper 17
cell differentiation" evidence=IEA] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0046872 GO:GO:0003677 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0006468 GO:GO:0033077 GO:GO:0006367
GO:GO:0048535 EMBL:AL589765 PDB:3KYT PDB:3L0J PDB:3L0L PDBsum:3KYT
PDBsum:3L0J PDBsum:3L0L HOVERGEN:HBG106848 EMBL:U16997
EMBL:AL834219 EMBL:BC031554 IPI:IPI00216710 IPI:IPI00418178
PIR:JC2494 RefSeq:NP_001001523.1 RefSeq:NP_005051.2
UniGene:Hs.256022 UniGene:Hs.607993 PDB:3B0W PDBsum:3B0W
ProteinModelPortal:P51449 SMR:P51449 IntAct:P51449 STRING:P51449
PhosphoSite:P51449 DMDM:49066040 PRIDE:P51449 DNASU:6097
Ensembl:ENST00000318247 Ensembl:ENST00000356728 GeneID:6097
KEGG:hsa:6097 UCSC:uc001ezh.3 CTD:6097 GeneCards:GC01M151778
HGNC:HGNC:10260 MIM:602943 neXtProt:NX_P51449 PharmGKB:PA34632
eggNOG:NOG317095 KO:K08534 ChEMBL:CHEMBL1741186
EvolutionaryTrace:P51449 GenomeRNAi:6097 NextBio:23717
ArrayExpress:P51449 Bgee:P51449 CleanEx:HS_RORC
Genevestigator:P51449 GermOnline:ENSG00000143365 GO:GO:0048537
GO:GO:0072539 Uniprot:P51449
Length = 518
Score = 162 (62.1 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ + + Y C + CP+D
Sbjct: 31 CKICGDKSSGIHYGVITCEGCKGFFRRSQRCNAAYSCTRQQNCPIDRTSRNRCQHCRLQK 90
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ V+
Sbjct: 91 CLALGMSRDAVK 102
Score = 117 (46.2 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 39/164 (23%), Positives = 75/164 (45%)
Query: 174 SVDVIRHFADKI-PGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLL 232
S+ I H + + + C+ E L + S +F RE + E ++ L
Sbjct: 266 SLTEIEHLVQSVCKSYRETCQLRLEDLLRQRS-NIFSREEVTGYQRKSMWEMWERCAHHL 324
Query: 233 TTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVL 292
T ++ + FA ++ GF +LC+ DQ +L ++ ++E+ ++R+ R D + +F G
Sbjct: 325 TEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEVVLVRMC-RAYNADNRTVFFEGKY- 382
Query: 293 EKQQCQRSFG-DDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ R+ G + +++I +F SL + A AL LI
Sbjct: 383 GGMELFRALGCSELISSIFDFSHSLSALHFSEDEIALYTALVLI 426
Score = 74 (31.1 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 171 LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
LT ++ + FA ++ GF +LC+ DQ +L ++ ++E+
Sbjct: 324 LTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEV 360
>UNIPROTKB|F1M9P1 [details] [associations]
symbol:Rxrb "Retinoic acid receptor RXR-beta" species:10116
"Rattus norvegicus" [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001893 "maternal placenta development"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3611 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0044212 GO:GO:0060038 GeneTree:ENSGT00690000101777
GO:GO:0055012 GO:GO:0004886 IPI:IPI00394256 OMA:FLPERHA
Ensembl:ENSRNOT00000041613 ArrayExpress:F1M9P1 Uniprot:F1M9P1
Length = 522
Score = 197 (74.4 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 34 PTPPSPS---QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
P P P +LCA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C VD
Sbjct: 178 PPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKR 237
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGR 121
CL GM +E V+ + +G+
Sbjct: 238 QRNRCQYCRYQKCLATGMKREAVQEERQRGK 268
Score = 71 (30.1 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS- 300
+A +IP FS L +DQ +L ++ EL + ++R+ ++ G+ + + +
Sbjct: 338 WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAG 397
Query: 301 FG---DDWLNAIL-EFCQSLHLMEIDISAFACLCALTL 334
G D L+ +L E + M +D + CL A+ L
Sbjct: 398 VGAIFDRSLSRVLTELVSKMRDMRMDKTELGCLRAIIL 435
Score = 46 (21.3 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A +IP FS L +DQ +L ++ EL
Sbjct: 338 WAKRIPHFSSLPLDDQVILLRAGWNEL 364
>MGI|MGI:1346833 [details] [associations]
symbol:Nr5a1 "nuclear receptor subfamily 5, group A, member
1" species:10090 "Mus musculus" [GO:0001553 "luteinization"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005543 "phospholipid binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008289 "lipid binding" evidence=IEA] [GO:0008584 "male gonad
development" evidence=IGI;IMP] [GO:0009888 "tissue development"
evidence=IMP] [GO:0010259 "multicellular organismal aging"
evidence=IMP] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0022414 "reproductive process" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IGI] [GO:0030325 "adrenal gland
development" evidence=IGI;IMP] [GO:0042445 "hormone metabolic
process" evidence=IMP] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IDA] [GO:2000020 "positive regulation of male
gonad development" evidence=ISO;IMP] [GO:2000195 "negative
regulation of female gonad development" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1346833 GO:GO:0005634
GO:GO:0030154 GO:GO:0030325 GO:GO:0005543 GO:GO:0046872
GO:GO:0003677 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003682 GO:GO:0003705 GO:GO:0008584 GO:GO:0003690
GO:GO:0042445 GO:GO:0051457 GO:GO:0010259 GO:GO:0001553
GO:GO:2000020 GO:GO:0009888 GO:GO:2000195 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
PDB:1YMT PDBsum:1YMT PDB:1YP0 PDBsum:1YP0 HOVERGEN:HBG106677
EMBL:AL844842 PDB:3F7D PDBsum:3F7D CTD:2516 KO:K08560 OMA:PFGLMCK
OrthoDB:EOG4FJ891 EMBL:D10584 EMBL:S65878 EMBL:S65875 EMBL:S65919
EMBL:S65876 EMBL:S65877 EMBL:AF511594 EMBL:AK134378 EMBL:AK144376
EMBL:BC110476 EMBL:BC110477 IPI:IPI00107985 IPI:IPI00330060
PIR:A40716 PIR:A42128 RefSeq:NP_620639.1 UniGene:Mm.31387 PDB:2FF0
PDBsum:2FF0 ProteinModelPortal:P33242 SMR:P33242 STRING:P33242
PhosphoSite:P33242 PRIDE:P33242 Ensembl:ENSMUST00000028084
Ensembl:ENSMUST00000112883 GeneID:26423 KEGG:mmu:26423
InParanoid:Q812G5 ChEMBL:CHEMBL1764943 EvolutionaryTrace:P33242
NextBio:304449 Bgee:P33242 CleanEx:MM_NR5A1 Genevestigator:P33242
GermOnline:ENSMUSG00000026751 Uniprot:P33242
Length = 462
Score = 200 (75.5 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 37/84 (44%), Positives = 46/84 (54%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C ++C +D
Sbjct: 11 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRF 70
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
CL VGM E VR D ++G R +
Sbjct: 71 QKCLTVGMRLEAVRADRMRGGRNK 94
Score = 64 (27.6 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 27/106 (25%), Positives = 44/106 (41%)
Query: 234 TSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRT--RAEDTKLIFCNGVV 291
T + ++ +A + F +L DQ L Q+ EL VL YR ++ ++ G
Sbjct: 273 TFISIV-DWARRCMVFKELEVADQMTLLQNCWSELLVLDHIYRQVQYGKEDSILLVTGQE 331
Query: 292 LEKQQCQRSFGDDWLNAIL---EFCQSLHLMEIDISAFACLCALTL 334
+E G + +L E LH +++D F CL L L
Sbjct: 332 VELSTVAVQAGSLLHSLVLRAQELVLQLHALQLDRQEFVCLKFLIL 377
>UNIPROTKB|F1PUF6 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9615
"Canis lupus familiaris" [GO:0071300 "cellular response to retinoic
acid" evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0044212 GO:GO:0060038 GeneTree:ENSGT00690000101777
GO:GO:0055012 GO:GO:0004886 OMA:FLPERHA EMBL:AAEX03008237
Ensembl:ENSCAFT00000001418 NextBio:20856477 Uniprot:F1PUF6
Length = 536
Score = 197 (74.4 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 34 PTPPSPS---QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXX 90
P P P +LCA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C VD
Sbjct: 192 PPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKR 251
Query: 91 XXXXXXXXXXXXCLQVGMVKEVVRTDSLKGR 121
CL GM +E V+ + +G+
Sbjct: 252 QRNRCQYCRYQKCLATGMKREAVQEERQRGK 282
Score = 71 (30.1 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRS- 300
+A +IP FS L +DQ +L ++ EL + ++R+ ++ G+ + + +
Sbjct: 352 WAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAG 411
Query: 301 FG---DDWLNAIL-EFCQSLHLMEIDISAFACLCALTL 334
G D L+ +L E + M +D + CL A+ L
Sbjct: 412 VGAIFDRSLSRVLTELVSKMRDMRMDKTELGCLRAIIL 449
Score = 46 (21.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A +IP FS L +DQ +L ++ EL
Sbjct: 352 WAKRIPHFSSLPLDDQVILLRAGWNEL 378
>UNIPROTKB|H7BYJ4 [details] [associations]
symbol:RORC "Nuclear receptor ROR-gamma" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 EMBL:AL589765 HGNC:HGNC:10260
ProteinModelPortal:H7BYJ4 SMR:H7BYJ4 Ensembl:ENST00000392697
OMA:AFPPLYK Bgee:H7BYJ4 Uniprot:H7BYJ4
Length = 572
Score = 162 (62.1 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ + + Y C + CP+D
Sbjct: 85 CKICGDKSSGIHYGVITCEGCKGFFRRSQRCNAAYSCTRQQNCPIDRTSRNRCQHCRLQK 144
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ V+
Sbjct: 145 CLALGMSRDAVK 156
Score = 117 (46.2 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 39/164 (23%), Positives = 75/164 (45%)
Query: 174 SVDVIRHFADKI-PGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLL 232
S+ I H + + + C+ E L + S +F RE + E ++ L
Sbjct: 320 SLTEIEHLVQSVCKSYRETCQLRLEDLLRQRS-NIFSREEVTGYQRKSMWEMWERCAHHL 378
Query: 233 TTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVL 292
T ++ + FA ++ GF +LC+ DQ +L ++ ++E+ ++R+ R D + +F G
Sbjct: 379 TEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEVVLVRMC-RAYNADNRTVFFEGKY- 436
Query: 293 EKQQCQRSFG-DDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ R+ G + +++I +F SL + A AL LI
Sbjct: 437 GGMELFRALGCSELISSIFDFSHSLSALHFSEDEIALYTALVLI 480
Score = 74 (31.1 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 171 LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
LT ++ + FA ++ GF +LC+ DQ +L ++ ++E+
Sbjct: 378 LTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEV 414
>UNIPROTKB|Q9TU15 [details] [associations]
symbol:ESR2 "Estrogen receptor beta" species:9940 "Ovis
aries" [GO:0051091 "positive regulation of sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0051091 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG108344 CTD:2100 InterPro:IPR021064
Pfam:PF12497 EMBL:AF177936 EMBL:AF257109 RefSeq:NP_001009737.1
UniGene:Oar.651 ProteinModelPortal:Q9TU15 SMR:Q9TU15 GeneID:443066
Uniprot:Q9TU15
Length = 527
Score = 180 (68.4 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 37/106 (34%), Positives = 47/106 (44%)
Query: 5 RSSSSESPKLRHXXXXXXXXXXXGCDTSRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCK 64
RS P R S P+ + CAVC D A+ HYGV +CEGCK
Sbjct: 108 RSLEHTFPVNRETLKRKASGSSCASPVSSPSSKRDAHFCAVCSDYASGYHYGVWSCEGCK 167
Query: 65 GFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXXCLQVGMVK 110
FFKR++Q + Y+C A C +D C +VGMVK
Sbjct: 168 AFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVK 213
Score = 93 (37.8 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 218 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRT 277
P E + L + + +A KIPGF +L DQ L +S LE+ ++ L +R+
Sbjct: 285 PFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLYDQVRLLESCWLEVLMVGLMWRS 344
Query: 278 RAEDTKLIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
KLIF +VL++ + + G + + +L +++ + C+ A+ L+
Sbjct: 345 IDHPGKLIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILL 403
Score = 57 (25.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 157 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
P E + L + + +A KIPGF +L DQ L +S LE+
Sbjct: 285 PFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLYDQVRLLESCWLEV 335
>RGD|1583230 [details] [associations]
symbol:Rarg "retinoic acid receptor, gamma" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0002063 "chondrocyte development" evidence=ISO] [GO:0003417
"growth plate cartilage development" evidence=ISO] [GO:0003430
"growth plate cartilage chondrocyte growth" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IMP] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA;ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010468 "regulation of gene expression" evidence=ISO]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0031641 "regulation of myelination" evidence=IDA] [GO:0032331
"negative regulation of chondrocyte differentiation"
evidence=IEA;ISO] [GO:0032526 "response to retinoic acid"
evidence=ISO] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043068 "positive regulation of
programmed cell death" evidence=ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046965 "retinoid X receptor binding" evidence=IEA;ISO]
[GO:0048048 "embryonic eye morphogenesis" evidence=IEA;ISO]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=ISO;IMP] [GO:0048608 "reproductive structure development"
evidence=ISO] [GO:0048732 "gland development" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060348 "bone
development" evidence=ISO] [GO:0060349 "bone morphogenesis"
evidence=ISO] [GO:0060429 "epithelium development" evidence=ISO]
[GO:0060534 "trachea cartilage development" evidence=IEA;ISO]
[GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA;ISO] [GO:0061037 "negative regulation of cartilage
development" evidence=IEA;ISO] [GO:0070384 "Harderian gland
development" evidence=IEA;ISO] [GO:0071300 "cellular response to
retinoic acid" evidence=IEP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:1583230 GO:GO:0008285 GO:GO:0009952
GO:GO:0046872 GO:GO:0008284 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071300 GO:GO:0045944 GO:GO:0005667 GO:GO:0000122
GO:GO:0043065 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0060740 GO:GO:0032331 GO:GO:0031641 GO:GO:0003708 CTD:5916
GO:GO:0070384 GO:GO:0061037 GeneTree:ENSGT00680000099662 KO:K08529
GO:GO:0003430 GO:GO:0060534 IPI:IPI00914166 RefSeq:NP_001128722.1
UniGene:Rn.198797 Ensembl:ENSRNOT00000016801 GeneID:685072
KEGG:rno:685072 UCSC:RGD:1583230 ChEMBL:CHEMBL2630 NextBio:728895
ArrayExpress:D3ZWV0 Uniprot:D3ZWV0
Length = 485
Score = 217 (81.4 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 59/196 (30%), Positives = 89/196 (45%)
Query: 32 SRPTPPSPSQL---CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVD 88
S P+PP P ++ C VC D ++ HYGV +CEGCKGFF+R++QK Y C DK C ++
Sbjct: 103 SSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIIN 162
Query: 89 XXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITALY 148
C +VGM KE VR D K ++ + LIT +
Sbjct: 163 KVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKK-EVKEEGPPDNYELSPQLEELITKVS 221
Query: 149 REPNPLEPPIAE----------PEKIQ-------QFYSLLTTSVDVIRHFADKIPGFSDL 191
+ P + + ++Q +F L T + I FA ++PGF+ L
Sbjct: 222 KAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGL 281
Query: 192 CKEDQELLFQSASLEL 207
DQ L ++A L++
Sbjct: 282 SIADQITLLKAACLDI 297
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 227 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIF 286
+F L T + I FA ++PGF+ L DQ L ++A L++ +LR+ R E + F
Sbjct: 256 KFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTF 315
Query: 287 CNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+G+ L + Q + FG + + F L +E+D + L A+ LI
Sbjct: 316 SDGLTLNRTQMHNAGFGP-LTDLVFAFAGQLLPLEMDDTETGLLSAICLI 364
>ZFIN|ZDB-GENE-110411-42 [details] [associations]
symbol:si:dkey-80m2.2 "si:dkey-80m2.2" species:7955
"Danio rerio" [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-110411-42
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GeneTree:ENSGT00700000104109
EMBL:CR388088 EMBL:CR628385 EMBL:CR749162 IPI:IPI00995584
ProteinModelPortal:E7FBX0 Ensembl:ENSDART00000128798 Uniprot:E7FBX0
Length = 480
Score = 159 (61.0 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 28/80 (35%), Positives = 41/80 (51%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ +Y C CP+D
Sbjct: 11 CKICGDKSSGVHYGVITCEGCKGFFRRSQSSSVQYSCSRQSNCPIDRASRNRCQSCRLKK 70
Query: 103 CLQVGMVKEVVRTDSLKGRR 122
C+ GM ++ V+ + R+
Sbjct: 71 CVAQGMSRDAVKFGRMSKRQ 90
Score = 117 (46.2 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 47/180 (26%), Positives = 88/180 (48%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
+PE F+S TS+ A I + + E L Q+ ++F RE +
Sbjct: 217 DPES--SFFSY-PTSLQTEELAASIIRSHKETTQYRLEEL-QALRWKVFSREEVHIYQ-- 270
Query: 220 AEP-EKIQQFYSL-LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLA--Y 275
++P +++ Q+ ++ L+ +V + FA +IPGF LC+ DQ L +S S+E+ ++R+ +
Sbjct: 271 SKPVDEMWQYCAVRLSDAVQYVVEFAKRIPGFRQLCQNDQIALLKSGSMEVVLVRMTRMF 330
Query: 276 RTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
T A +T +F +G + + D + A+ EF +L + ++ A A+ LI
Sbjct: 331 NT-ANNT--VFFDGKYAGTELFKSLACSDLIAAVFEFANNLCALRLNEQQMAVFTAMILI 387
>UNIPROTKB|F1N7B3 [details] [associations]
symbol:RORC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072539 "T-helper 17 cell differentiation"
evidence=IEA] [GO:0048537 "mucosal-associated lymphoid tissue
development" evidence=IEA] [GO:0048535 "lymph node development"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006468
GO:GO:0033077 GO:GO:0030522 GO:GO:0048535
GeneTree:ENSGT00700000104109 GO:GO:0048537 GO:GO:0072539
OMA:AFPPLYK EMBL:DAAA02007247 IPI:IPI00687924 UniGene:Bt.49360
Ensembl:ENSBTAT00000044130 Uniprot:F1N7B3
Length = 506
Score = 163 (62.4 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q Y C + CP+D
Sbjct: 31 CKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVAYSCTRQQNCPIDRTSRNRCQHCRLQK 90
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ V+
Sbjct: 91 CLALGMSRDAVK 102
Score = 113 (44.8 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 48/199 (24%), Positives = 88/199 (44%)
Query: 147 LYREPNPLEPPIAEPEK-IQQFY--SLLTT------SVDVIRHFADKI-PGFSDLCKEDQ 196
L+ E +P P + EP + + ++ S +T S+ I H + + D C+
Sbjct: 231 LHSE-DPRRPGLGEPGRGLDSYFTPSFRSTPEVPYASLTEIEHLVQNVCKSYRDTCQLRL 289
Query: 197 ELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKED 256
E L + S +F RE + E + LT ++ + FA ++PGF +LC+ D
Sbjct: 290 EDLLRQRS-NIFSREEVAGYQRKSMWEMWGRCAHRLTEAIQYVVEFAKRLPGFMELCQND 348
Query: 257 QELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSL 316
Q +L ++ ++E+ ++R+ R D +F G C + +++I +F +SL
Sbjct: 349 QIVLLKAGAMEVVLVRMC-RAYNADNDTVFFEG-------CS-----ELISSIFDFSRSL 395
Query: 317 HLMEIDISAFACLCALTLI 335
+ A AL LI
Sbjct: 396 SALRFSEDEIALYTALVLI 414
>UNIPROTKB|B4E2P3 [details] [associations]
symbol:NR5A2 "cDNA FLJ52395, highly similar to Orphan
nuclear receptor NR5A2" species:9606 "Homo sapiens" [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008206 "bile
acid metabolic process" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0042632 "cholesterol
homeostasis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008206
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0042632 GO:GO:0042127 GO:GO:0030522
InterPro:IPR016355 PIRSF:PIRSF002530 HOGENOM:HOG000063718
HOVERGEN:HBG106677 UniGene:Hs.33446 HGNC:HGNC:7984 EMBL:AC096633
EMBL:AK304365 EMBL:AK316513 IPI:IPI01009507 SMR:B4E2P3
STRING:B4E2P3 Ensembl:ENST00000544748 Uniprot:B4E2P3
Length = 469
Score = 206 (77.6 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 37/84 (44%), Positives = 48/84 (57%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++ C +D
Sbjct: 12 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 71
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
CL VGM E VR D ++G R +
Sbjct: 72 QKCLSVGMKLEAVRADRMRGGRNK 95
Score = 52 (23.4 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 23/92 (25%), Positives = 36/92 (39%)
Query: 249 FSDLCKEDQELLFQSASLELFVLRLAYR--TRAEDTKLIFCNGVVLEKQQCQRSFGDDWL 306
F +L +DQ L Q+ EL +L YR ++ + G ++ G L
Sbjct: 294 FRELKVDDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVDYSIIASQAGAT-L 352
Query: 307 NAILEFCQSL----HLMEIDISAFACLCALTL 334
N ++ Q L ++ D F CL L L
Sbjct: 353 NNLMSHAQELVAKLRSLQFDQREFVCLKFLVL 384
>UNIPROTKB|Q92753 [details] [associations]
symbol:RORB "Nuclear receptor ROR-beta" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0042462 "eye
photoreceptor cell development" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0045893 GO:GO:0005654 GO:GO:0007420
GO:GO:0046872 GO:GO:0007623 GO:GO:0007601 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006367 GO:GO:0042462
eggNOG:NOG324222 GO:GO:0008502 HOGENOM:HOG000010200
HOVERGEN:HBG106848 EMBL:Y08639 EMBL:BX647070 EMBL:AL137018
IPI:IPI00023259 IPI:IPI00827604 RefSeq:NP_008845.2
UniGene:Hs.494178 ProteinModelPortal:Q92753 SMR:Q92753
STRING:Q92753 PhosphoSite:Q92753 DMDM:124028630 PRIDE:Q92753
DNASU:6096 Ensembl:ENST00000376896 Ensembl:ENST00000396204
GeneID:6096 KEGG:hsa:6096 UCSC:uc004aji.3 CTD:6096
GeneCards:GC09P077112 HGNC:HGNC:10259 HPA:HPA008393 MIM:601972
neXtProt:NX_Q92753 PharmGKB:PA34631 InParanoid:Q92753 KO:K08533
OMA:SGHTMRA OrthoDB:EOG4KH2TT ChiTaRS:RORB GenomeRNAi:6096
NextBio:23713 ArrayExpress:Q92753 Bgee:Q92753 CleanEx:HS_RORB
Genevestigator:Q92753 GermOnline:ENSG00000198963 Uniprot:Q92753
Length = 470
Score = 158 (60.7 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C + C +D
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 80
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ V+
Sbjct: 81 CLALGMSRDAVK 92
Score = 117 (46.2 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 42/158 (26%), Positives = 70/158 (44%)
Query: 173 TSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLL 232
T ++ R + I + C+ E L Q A Y E + E QQ +
Sbjct: 219 TMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREA-LWQQCAIQI 277
Query: 233 TTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVL 292
T ++ + FA +I GF +LC+ DQ LL +S LE+ ++R+ + ++F G
Sbjct: 278 THAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLF-EGKYG 336
Query: 293 EKQQCQRSFGDDWLNAILEFCQ---SLHLMEIDISAFA 327
Q + DD +N +F + SL L E +I+ F+
Sbjct: 337 GMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFS 374
Score = 95 (38.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 165 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY----REPNPLEPPIA 220
QQ +T ++ + FA +I GF +LC+ DQ LL +S LE+ R NPL +
Sbjct: 271 QQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVL 330
Query: 221 EPEK---IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQEL-LFQSASL 266
K +Q F +L S D++ D L ++E+ LF SA L
Sbjct: 331 FEGKYGGMQMFKAL--GSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVL 378
>MGI|MGI:1346834 [details] [associations]
symbol:Nr5a2 "nuclear receptor subfamily 5, group A, member
2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO] [GO:0005543
"phospholipid binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0008206 "bile acid metabolic process" evidence=IMP] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IGI] [GO:0042632 "cholesterol homeostasis"
evidence=IMP] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045070 "positive regulation of viral
genome replication" evidence=ISO] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] Reactome:REACT_13641 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1346834 GO:GO:0005829 GO:GO:0005634
GO:GO:0008206 GO:GO:0005543 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0042632 GO:GO:0042127 GO:GO:0044212
Reactome:REACT_127416 GO:GO:0030522 GO:GO:0031018 GO:GO:0045070
eggNOG:NOG240365 GeneTree:ENSGT00670000097927 InterPro:IPR016355
PIRSF:PIRSF002530 PDB:3F5C PDBsum:3F5C PDB:1ZH7 PDBsum:1ZH7
CTD:2494 HOGENOM:HOG000063718 HOVERGEN:HBG106677 KO:K08027
OrthoDB:EOG470TH1 OMA:NTFGLMC EMBL:M81385 EMBL:BC137845
IPI:IPI00129665 PIR:S27874 RefSeq:NP_109601.1 UniGene:Mm.16794
PDB:1PK5 PDBsum:1PK5 ProteinModelPortal:P45448 SMR:P45448
STRING:P45448 PhosphoSite:P45448 PRIDE:P45448
Ensembl:ENSMUST00000027649 GeneID:26424 KEGG:mmu:26424
UCSC:uc007cvc.2 InParanoid:P45448 EvolutionaryTrace:P45448
NextBio:304453 Bgee:P45448 CleanEx:MM_NR5A2 Genevestigator:P45448
GermOnline:ENSMUSG00000026398 Uniprot:P45448
Length = 560
Score = 202 (76.2 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 36/84 (42%), Positives = 48/84 (57%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++ C +D
Sbjct: 105 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNQKRYTCIENQNCQIDKTQRKRCPYCRF 164
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
C+ VGM E VR D ++G R +
Sbjct: 165 KKCIDVGMKLEAVRADRMRGGRNK 188
Score = 46 (21.3 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 24/92 (26%), Positives = 38/92 (41%)
Query: 249 FSDLCKEDQELLFQSASLELFVLRLAYRTRA--EDTKLIFCNGVVLEKQQCQRSFGDDWL 306
F +L +DQ L Q+ EL +L YR A ++ + G ++ S +
Sbjct: 385 FRELKVDDQMKLLQNCWSELLILDHIYRQVAHGKEGTIFLVTGEHVDYSTII-SHTEVAF 443
Query: 307 NAILEFCQSLHL----MEIDISAFACLCALTL 334
N +L Q L + ++ D F CL L L
Sbjct: 444 NNLLSLAQELVVRLRSLQFDQREFVCLKFLVL 475
Score = 45 (20.9 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 179 RHFADKIPGFSDLCKEDQELLF---QSASLELFYRE 211
R+ +K+ F LCK + LF + A +F+RE
Sbjct: 352 RNRQEKLSAFGLLCKMADQTLFSIVEWARSSIFFRE 387
Score = 39 (18.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 205 LELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLF 261
LEL EP+ EP + KI + ++ R+ +K+ F LCK + LF
Sbjct: 325 LELLKCEPD--EPQVQA--KIMAYLQQEQSN----RNRQEKLSAFGLLCKMADQTLF 373
>RGD|68353 [details] [associations]
symbol:Nr5a2 "nuclear receptor subfamily 5, group A, member 2"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0005543
"phospholipid binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0008206 "bile acid metabolic process"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=IDA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042632 "cholesterol homeostasis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045070 "positive regulation of viral
genome replication" evidence=IEA;ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:68353 GO:GO:0005634 GO:GO:0005737 GO:GO:0008206
GO:GO:0005543 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0042632 GO:GO:0042127
GO:GO:0044212 GO:GO:0003690 GO:GO:0045070 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
CTD:2494 HOGENOM:HOG000063718 HOVERGEN:HBG106677 KO:K08027
OrthoDB:EOG470TH1 OMA:NTFGLMC EMBL:AB012960 EMBL:AB012961
IPI:IPI00212414 IPI:IPI00212417 RefSeq:NP_068510.1 UniGene:Rn.42941
ProteinModelPortal:Q9QWM1 SMR:Q9QWM1 STRING:Q9QWM1
PhosphoSite:Q9QWM1 Ensembl:ENSRNOT00000000811
Ensembl:ENSRNOT00000000812 GeneID:60349 KEGG:rno:60349
UCSC:RGD:68353 InParanoid:Q9QWM1 NextBio:612007
Genevestigator:Q9QWM1 GermOnline:ENSRNOG00000000653 Uniprot:Q9QWM1
Length = 560
Score = 202 (76.2 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 36/84 (42%), Positives = 48/84 (57%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++ C +D
Sbjct: 105 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNQKRYTCIENQNCQIDKTQRKRCPYCRF 164
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
C+ VGM E VR D ++G R +
Sbjct: 165 KKCIDVGMKLEAVRADRMRGGRNK 188
Score = 46 (21.3 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 23/92 (25%), Positives = 39/92 (42%)
Query: 249 FSDLCKEDQELLFQSASLELFVLRLAYRTRA--EDTKLIFCNGVVLEKQQC----QRSFG 302
F +L +DQ L Q+ EL +L YR A ++ + G ++ + +F
Sbjct: 385 FRELKVDDQMKLLQNCWSELLILDHIYRQVAHGKEGTIFLVTGEHVDYSSIISNTEVAF- 443
Query: 303 DDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
++ L+ E L ++ D F CL L L
Sbjct: 444 NNLLSLAQELVVRLRSLQFDQREFVCLKFLVL 475
Score = 45 (20.9 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 179 RHFADKIPGFSDLCKEDQELLF---QSASLELFYRE 211
R+ +K+ F LCK + LF + A +F+RE
Sbjct: 352 RNRQEKLSAFGLLCKMADQTLFSIVEWARSSIFFRE 387
Score = 38 (18.4 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 205 LELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLF 261
LEL EP+ EP + KI + + R+ +K+ F LCK + LF
Sbjct: 325 LELLKCEPD--EPQVQA--KIMAYLQQEQNN----RNRQEKLSAFGLLCKMADQTLF 373
>ZFIN|ZDB-GENE-030116-1 [details] [associations]
symbol:esr2b "estrogen receptor 2b" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-030116-1 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104072
HOVERGEN:HBG108344 HOGENOM:HOG000233468 InterPro:IPR021064
Pfam:PF12497 EMBL:CT025749 IPI:IPI00920188 UniGene:Dr.82564
Ensembl:ENSDART00000041300 OMA:CVEGIME OrthoDB:EOG4CJVH6
Uniprot:B8JJL4
Length = 600
Score = 168 (64.2 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 30/71 (42%), Positives = 40/71 (56%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXX 99
+ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 162 THFCAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKSRRKSCQACR 221
Query: 100 XXXCLQVGMVK 110
C +VGM+K
Sbjct: 222 LRKCYEVGMMK 232
Score = 108 (43.1 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 32/132 (24%), Positives = 63/132 (47%)
Query: 206 ELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSAS 265
+++ REP ++ P E + SL + ++ +A KIPGF +L DQ L +
Sbjct: 319 QIYLREP--VKKPYTEASMMMSLTSLADKELVLMISWAKKIPGFVELTLSDQVHLLECCW 376
Query: 266 LELFVLRLAYRTRAEDTKLIFCNGVVLEKQQ--CQRSFGDDWLNAILEFCQSLHLMEIDI 323
L++ +L L +R+ KLIF + L +++ C + + + +L +++
Sbjct: 377 LDILMLGLMWRSVDHPGKLIFTPDLKLNREEGNCVEGIMEIF-DMLLATTSRFRELKLQR 435
Query: 324 SAFACLCALTLI 335
+ CL A+ L+
Sbjct: 436 EEYVCLKAMILL 447
Score = 66 (28.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 153 PLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
P++ P E + SL + ++ +A KIPGF +L DQ L + L++
Sbjct: 325 PVKKPYTEASMMMSLTSLADKELVLMISWAKKIPGFVELTLSDQVHLLECCWLDI 379
>ZFIN|ZDB-GENE-061204-2 [details] [associations]
symbol:rorb "RAR-related orphan receptor B"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-061204-2
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GeneTree:ENSGT00700000104109
OMA:SGHTMRA EMBL:BX537293 EMBL:CU929335 IPI:IPI00489649
Ensembl:ENSDART00000089748 Bgee:F1R6M2 Uniprot:F1R6M2
Length = 466
Score = 158 (60.7 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C + C +D
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 69
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ V+
Sbjct: 70 CLALGMSRDAVK 81
Score = 116 (45.9 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 32/111 (28%), Positives = 57/111 (51%)
Query: 226 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLI 285
QQ +T ++ + FA +I GF +LC+ DQ LL +S LE+ ++R+ + ++
Sbjct: 266 QQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVL 325
Query: 286 FCNGVVLEKQQCQRSFG-DDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
F G Q ++ G DD ++A+ +F +SL +++ A A LI
Sbjct: 326 F-EGKY-GGMQIFKTLGCDDLVSAVFDFAKSLCSLQLTEEEIALFSAAVLI 374
Score = 87 (35.7 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 165 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY----REPNPLEPPIA 220
QQ +T ++ + FA +I GF +LC+ DQ LL +S LE+ R NPL +
Sbjct: 266 QQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVL 325
Query: 221 EPEKI--QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQEL-LFQSASL 266
K Q + L D++ D L ++E+ LF +A L
Sbjct: 326 FEGKYGGMQIFKTLGCD-DLVSAVFDFAKSLCSLQLTEEEIALFSAAVL 373
>MGI|MGI:109392 [details] [associations]
symbol:Esr2 "estrogen receptor 2 (beta)" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISO] [GO:0001541
"ovarian follicle development" evidence=IMP] [GO:0001662
"behavioral fear response" evidence=ISO] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=ISO] [GO:0005496 "steroid binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007420 "brain development"
evidence=IMP] [GO:0007611 "learning or memory" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030284 "estrogen receptor activity" evidence=ISO] [GO:0030518
"intracellular steroid hormone receptor signaling pathway"
evidence=ISO] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IMP] [GO:0032355 "response to estradiol
stimulus" evidence=ISO] [GO:0033574 "response to testosterone
stimulus" evidence=ISO] [GO:0034056 "estrogen response element
binding" evidence=ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0042562 "hormone binding"
evidence=ISO] [GO:0043005 "neuron projection" evidence=ISO]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0043204 "perikaryon" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043523 "regulation of neuron apoptotic process" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0045742 "positive regulation of epidermal growth factor
receptor signaling pathway" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0048521 "negative regulation of
behavior" evidence=ISO] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=ISO;IMP] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0060011 "Sertoli cell
proliferation" evidence=ISO] [GO:0060065 "uterus development"
evidence=IGI] [GO:0060068 "vagina development" evidence=IGI]
[GO:0060548 "negative regulation of cell death" evidence=ISO]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IMP]
[GO:0060743 "epithelial cell maturation involved in prostate gland
development" evidence=IMP] [GO:0060766 "negative regulation of
androgen receptor signaling pathway" evidence=IMP] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=ISO]
[GO:0071392 "cellular response to estradiol stimulus" evidence=ISO]
[GO:1901215 "negative regulation of neuron death" evidence=ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:109392 GO:GO:0005739 GO:GO:0005634
GO:GO:0005737 GO:GO:0001764 GO:GO:0007420 GO:GO:0051091
GO:GO:0005496 GO:GO:0046872 GO:GO:0003677 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0043065
GO:GO:0001541 GO:GO:0050680 GO:GO:0060740
GeneTree:ENSGT00700000104072 GO:GO:0030520 GO:GO:0060068
GO:GO:0001046 GO:GO:0060766 HOVERGEN:HBG108344 HOGENOM:HOG000233468
GO:GO:0034056 GO:GO:0060065 CTD:2100 eggNOG:NOG271979 KO:K08551
OrthoDB:EOG41RPTT GO:GO:0060743 InterPro:IPR021064 Pfam:PF12497
EMBL:AK054290 EMBL:AK054413 EMBL:AC164121 EMBL:BC141075
EMBL:BC145329 EMBL:U81451 EMBL:AJ000220 EMBL:AY054413 EMBL:AF067422
EMBL:AF063853 IPI:IPI00114349 IPI:IPI00230298 IPI:IPI00230299
IPI:IPI00230300 IPI:IPI00410734 RefSeq:NP_034287.3
RefSeq:NP_997590.1 UniGene:Mm.2561 ProteinModelPortal:O08537
SMR:O08537 IntAct:O08537 STRING:O08537 GlycoSuiteDB:O08537
PhosphoSite:O08537 PRIDE:O08537 Ensembl:ENSMUST00000076634
Ensembl:ENSMUST00000101291 Ensembl:ENSMUST00000110421 GeneID:13983
KEGG:mmu:13983 BindingDB:O08537 ChEMBL:CHEMBL2995 NextBio:284858
Bgee:O08537 CleanEx:MM_ESR2 Genevestigator:O08537
GermOnline:ENSMUSG00000021055 Uniprot:O08537
Length = 530
Score = 179 (68.1 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 34/85 (40%), Positives = 46/85 (54%)
Query: 28 GCDT--SRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKAC 85
GC + + P+ + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C
Sbjct: 132 GCASPVTSPSAKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQC 191
Query: 86 PVDXXXXXXXXXXXXXXCLQVGMVK 110
+D C +VGMVK
Sbjct: 192 TIDKNRRKSCQACRLRKCYEVGMVK 216
Score = 92 (37.4 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 40/151 (26%), Positives = 68/151 (45%)
Query: 196 QELLFQSAS-----LELFYREP-NPL--EP--PIAEPEKIQQFYSLLTTSVDVIRHFADK 245
+ELL S S L L EP N L P P E + L + + +A K
Sbjct: 256 KELLLNSLSPEQLVLTLLEAEPPNVLVSRPSMPFTEASMMMSLTKLADKELVHMIGWAKK 315
Query: 246 IPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGD-D 304
IPGF +L DQ L +S +E+ ++ L +R+ KLIF +VL++ + + G +
Sbjct: 316 IPGFVELSLLDQVRLLESCWMEVLMVGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILE 375
Query: 305 WLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ +L +++ + C+ A+ L+
Sbjct: 376 IFDMLLATTARFRELKLQHKEYLCVKAMILL 406
Score = 57 (25.1 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 143 LITALYREP-NPL--EP--PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQE 197
++T L EP N L P P E + L + + +A KIPGF +L DQ
Sbjct: 269 VLTLLEAEPPNVLVSRPSMPFTEASMMMSLTKLADKELVHMIGWAKKIPGFVELSLLDQV 328
Query: 198 LLFQSASLEL 207
L +S +E+
Sbjct: 329 RLLESCWMEV 338
>UNIPROTKB|F1RS47 [details] [associations]
symbol:THRB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008050 "female
courtship behavior" evidence=IEA] [GO:0008016 "regulation of heart
contraction" evidence=IEA] [GO:0007621 "negative regulation of
female receptivity" evidence=IEA] [GO:0007605 "sensory perception
of sound" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0008016
GO:GO:0000122 GO:GO:0009887 GO:GO:0007605 GO:GO:0031490
GO:GO:0004887 GO:GO:0007621 GO:GO:0008050
GeneTree:ENSGT00680000099662 OMA:HLIQATW EMBL:CU463272
EMBL:CU633256 Ensembl:ENSSSCT00000012277 Uniprot:F1RS47
Length = 461
Score = 169 (64.5 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 36/99 (36%), Positives = 48/99 (48%)
Query: 29 CDTSRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACP 86
C P+ +LC VCGD A HY TCEGCKGFF+RT+QK Y C + C
Sbjct: 93 CKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYACKYEGKCV 152
Query: 87 VDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
+D C+ VGM ++V DS + + +L
Sbjct: 153 IDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKL 191
Score = 102 (41.0 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 42/176 (23%), Positives = 72/176 (40%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
+PE Q + L+ T + H A G K+ ++ L + P E
Sbjct: 211 KPEPTDQEWELIKTVTEA--HVATNAQGSH--WKQKRKFLPEDIGQAPIVNAP---EGGK 263
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
+ E F ++T ++ + FA K+P F +L EDQ +L + +E+ LR A R
Sbjct: 264 VDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDP 323
Query: 280 EDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
E L + + + Q + +AI + SL +D + A L A+ L+
Sbjct: 324 ESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLM 379
>UNIPROTKB|F1MCM4 [details] [associations]
symbol:NR5A2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045070 "positive
regulation of viral genome replication" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0042632 "cholesterol homeostasis" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0008206 "bile
acid metabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005737 GO:GO:0008206
GO:GO:0005543 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0042632
GO:GO:0042127 GO:GO:0044212 GO:GO:0045070
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
CTD:2494 KO:K08027 OMA:NTFGLMC EMBL:DAAA02043946 EMBL:DAAA02043947
EMBL:DAAA02043948 EMBL:DAAA02043949 EMBL:DAAA02043950
EMBL:DAAA02043951 IPI:IPI01004030 RefSeq:NP_001193745.1
UniGene:Bt.107646 UniGene:Bt.10845 UniGene:Bt.97978
Ensembl:ENSBTAT00000012207 GeneID:541305 KEGG:bta:541305
NextBio:20879130 ArrayExpress:F1MCM4 Uniprot:F1MCM4
Length = 541
Score = 206 (77.6 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
Identities = 37/84 (44%), Positives = 48/84 (57%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++ C +D
Sbjct: 84 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 143
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
CL VGM E VR D ++G R +
Sbjct: 144 QKCLSVGMKLEAVRADRMRGGRNK 167
Score = 53 (23.7 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
Identities = 23/92 (25%), Positives = 36/92 (39%)
Query: 249 FSDLCKEDQELLFQSASLELFVLRLAYR--TRAEDTKLIFCNGVVLEKQQCQRSFGDDWL 306
F +L +DQ L Q+ EL +L YR ++ + G ++ G L
Sbjct: 366 FRELKVDDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVDYSVIASQAGAT-L 424
Query: 307 NAILEFCQSL----HLMEIDISAFACLCALTL 334
N ++ Q L ++ D F CL L L
Sbjct: 425 NNLMSHAQELVAKLRSLQFDQREFVCLKFLVL 456
>UNIPROTKB|Q98934 [details] [associations]
symbol:RORB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 eggNOG:NOG324222 GeneTree:ENSGT00700000104109
HOGENOM:HOG000010200 HOVERGEN:HBG106848 CTD:6096 KO:K08533
OrthoDB:EOG4KH2TT EMBL:AADN02059739 EMBL:AADN02059740
EMBL:AADN02059741 EMBL:AADN02059742 EMBL:AADN02059743
EMBL:AADN02059744 EMBL:AADN02059745 EMBL:AADN02059746
EMBL:AADN02059747 EMBL:AADN02059748 EMBL:AADN02059749
EMBL:AADN02059750 EMBL:Y08638 IPI:IPI00597298 RefSeq:NP_990424.1
UniGene:Gga.581 HSSP:P45446 SMR:Q98934 STRING:Q98934
Ensembl:ENSGALT00000024445 GeneID:395980 KEGG:gga:395980
NextBio:20816045 Uniprot:Q98934
Length = 459
Score = 158 (60.7 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C + C +D
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 69
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ V+
Sbjct: 70 CLALGMSRDAVK 81
Score = 115 (45.5 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 43/158 (27%), Positives = 70/158 (44%)
Query: 173 TSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLL 232
T +D I + I + C+ E L Q A Y E + E QQ +
Sbjct: 210 TEIDRIAQ--NIIKSHLETCQYTMEELHQLAWQTHTYEEIKVYQSKTREA-LWQQCAIQI 266
Query: 233 TTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVL 292
T ++ + FA +I GF +LC+ DQ LL +S LE+ ++R+ + ++F G
Sbjct: 267 THAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLF-EGKYG 325
Query: 293 EKQQCQRSFGDDWLNAILEFCQ---SLHLMEIDISAFA 327
Q + DD +N +F + SL L E +I+ F+
Sbjct: 326 GMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFS 363
Score = 95 (38.5 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 165 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY----REPNPLEPPIA 220
QQ +T ++ + FA +I GF +LC+ DQ LL +S LE+ R NPL +
Sbjct: 260 QQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVL 319
Query: 221 EPEK---IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQEL-LFQSASL 266
K +Q F +L S D++ D L ++E+ LF SA L
Sbjct: 320 FEGKYGGMQMFKAL--GSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVL 367
>UNIPROTKB|F1MWS0 [details] [associations]
symbol:RORB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GO:GO:0042462
GeneTree:ENSGT00700000104109 CTD:6096 KO:K08533 OMA:SGHTMRA
EMBL:DAAA02022913 EMBL:DAAA02022911 EMBL:DAAA02022912
IPI:IPI00709815 RefSeq:NP_001179587.1 UniGene:Bt.51697
Ensembl:ENSBTAT00000028921 GeneID:528382 KEGG:bta:528382
NextBio:20874809 Uniprot:F1MWS0
Length = 459
Score = 158 (60.7 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C + C +D
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 69
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ V+
Sbjct: 70 CLALGMSRDAVK 81
Score = 115 (45.5 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 42/158 (26%), Positives = 70/158 (44%)
Query: 173 TSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLL 232
T ++ R + I + C+ E L Q A Y E + E QQ +
Sbjct: 208 TMSEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREA-LWQQCAIQI 266
Query: 233 TTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVL 292
T ++ + FA +I GF +LC+ DQ LL +S LE+ ++R+ + ++F G
Sbjct: 267 THAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLF-EGKYG 325
Query: 293 EKQQCQRSFGDDWLNAILEFCQ---SLHLMEIDISAFA 327
Q + DD +N +F + SL L E +I+ F+
Sbjct: 326 GMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFS 363
Score = 95 (38.5 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 165 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY----REPNPLEPPIA 220
QQ +T ++ + FA +I GF +LC+ DQ LL +S LE+ R NPL +
Sbjct: 260 QQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVL 319
Query: 221 EPEK---IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQEL-LFQSASL 266
K +Q F +L S D++ D L ++E+ LF SA L
Sbjct: 320 FEGKYGGMQMFKAL--GSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVL 367
>UNIPROTKB|Q9XSW2 [details] [associations]
symbol:ESR2 "Estrogen receptor beta" species:9823 "Sus
scrofa" [GO:0051091 "positive regulation of sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0051091
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOVERGEN:HBG108344 HOGENOM:HOG000233468
CTD:2100 eggNOG:NOG271979 KO:K08551 OrthoDB:EOG41RPTT
InterPro:IPR021064 Pfam:PF12497 EMBL:AF164957 EMBL:AF267736
RefSeq:NP_001001533.1 UniGene:Ssc.16370 ProteinModelPortal:Q9XSW2
SMR:Q9XSW2 STRING:Q9XSW2 GeneID:396697 KEGG:ssc:396697
Uniprot:Q9XSW2
Length = 526
Score = 177 (67.4 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 36/106 (33%), Positives = 47/106 (44%)
Query: 5 RSSSSESPKLRHXXXXXXXXXXXGCDTSRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCK 64
RS P R + P+ + CAVC D A+ HYGV +CEGCK
Sbjct: 108 RSLEHTLPVNRETLKRKASGSSCASPVTSPSSKRDAHFCAVCSDYASGYHYGVWSCEGCK 167
Query: 65 GFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXXCLQVGMVK 110
FFKR++Q + Y+C A C +D C +VGMVK
Sbjct: 168 AFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVK 213
Score = 94 (38.1 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 218 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRT 277
P E + L + + +A KIPGF +L DQ L +S LE+ ++ L +R+
Sbjct: 285 PFTEASMMMSLTKLADKELVHMISWAKKIPGFMELSLYDQVRLLESCWLEVLMVGLMWRS 344
Query: 278 RAEDTKLIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
KLIF +VL++ + + G + + +L +++ + C+ A+ L+
Sbjct: 345 IDHPGKLIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILL 403
Score = 58 (25.5 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 157 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
P E + L + + +A KIPGF +L DQ L +S LE+
Sbjct: 285 PFTEASMMMSLTKLADKELVHMISWAKKIPGFMELSLYDQVRLLESCWLEV 335
>UNIPROTKB|F1PXN4 [details] [associations]
symbol:NR5A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
OMA:NTFGLMC EMBL:AAEX03005037 Ensembl:ENSCAFT00000017785
Uniprot:F1PXN4
Length = 519
Score = 206 (77.6 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 37/84 (44%), Positives = 48/84 (57%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++ C +D
Sbjct: 62 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 121
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
CL VGM E VR D ++G R +
Sbjct: 122 QKCLSVGMKLEAVRADRMRGGRNK 145
Score = 52 (23.4 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 23/92 (25%), Positives = 36/92 (39%)
Query: 249 FSDLCKEDQELLFQSASLELFVLRLAYR--TRAEDTKLIFCNGVVLEKQQCQRSFGDDWL 306
F +L +DQ L Q+ EL +L YR ++ + G ++ G L
Sbjct: 344 FRELKVDDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVDYSIIASQAGAT-L 402
Query: 307 NAILEFCQSL----HLMEIDISAFACLCALTL 334
N ++ Q L ++ D F CL L L
Sbjct: 403 NNLMSHAQELVAKLRSLQFDQREFVCLKFLVL 434
>UNIPROTKB|E1C5M3 [details] [associations]
symbol:RORB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042462 "eye photoreceptor
cell development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GeneTree:ENSGT00700000104109
OMA:SGHTMRA EMBL:AADN02059739 EMBL:AADN02059740 EMBL:AADN02059741
EMBL:AADN02059742 EMBL:AADN02059743 EMBL:AADN02059744
EMBL:AADN02059745 EMBL:AADN02059746 EMBL:AADN02059747
EMBL:AADN02059748 EMBL:AADN02059749 EMBL:AADN02059750
IPI:IPI00594386 Ensembl:ENSGALT00000024446 ArrayExpress:E1C5M3
Uniprot:E1C5M3
Length = 470
Score = 158 (60.7 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C + C +D
Sbjct: 18 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 77
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ V+
Sbjct: 78 CLALGMSRDAVK 89
Score = 115 (45.5 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 43/158 (27%), Positives = 70/158 (44%)
Query: 173 TSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLL 232
T +D I + I + C+ E L Q A Y E + E QQ +
Sbjct: 218 TEIDRIAQ--NIIKSHLETCQYTMEELHQLAWQTHTYEEIKVYQSKTREA-LWQQCAIQI 274
Query: 233 TTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVL 292
T ++ + FA +I GF +LC+ DQ LL +S LE+ ++R+ + ++F G
Sbjct: 275 THAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLF-EGKYG 333
Query: 293 EKQQCQRSFGDDWLNAILEFCQ---SLHLMEIDISAFA 327
Q + DD +N +F + SL L E +I+ F+
Sbjct: 334 GMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFS 371
Score = 95 (38.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 165 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY----REPNPLEPPIA 220
QQ +T ++ + FA +I GF +LC+ DQ LL +S LE+ R NPL +
Sbjct: 268 QQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVL 327
Query: 221 EPEK---IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQEL-LFQSASL 266
K +Q F +L S D++ D L ++E+ LF SA L
Sbjct: 328 FEGKYGGMQMFKAL--GSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVL 375
>MGI|MGI:1343464 [details] [associations]
symbol:Rorb "RAR-related orphan receptor beta" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008502 "melatonin receptor activity"
evidence=ISO] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IEA] [GO:0042462 "eye photoreceptor
cell development" evidence=IMP] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1343464 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0046872 GO:GO:0007623
GO:GO:0007601 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0030522 GO:GO:0042462 eggNOG:NOG324222
GeneTree:ENSGT00700000104109 GO:GO:0008502 HOGENOM:HOG000010200
HOVERGEN:HBG106848 CTD:6096 KO:K08533 OMA:SGHTMRA OrthoDB:EOG4KH2TT
EMBL:BC024842 EMBL:BC058269 EMBL:DQ779923 EMBL:DQ779924
EMBL:AB258405 IPI:IPI00153341 IPI:IPI00788322 RefSeq:NP_001036819.1
RefSeq:NP_666207.3 UniGene:Mm.276747 ProteinModelPortal:Q8R1B8
SMR:Q8R1B8 STRING:Q8R1B8 PhosphoSite:Q8R1B8 PRIDE:Q8R1B8
Ensembl:ENSMUST00000040153 Ensembl:ENSMUST00000112828
Ensembl:ENSMUST00000112832 GeneID:225998 KEGG:mmu:225998
UCSC:uc008gyc.1 UCSC:uc008gyd.1 NextBio:377911 Bgee:Q8R1B8
CleanEx:MM_RORB Genevestigator:Q8R1B8 GermOnline:ENSMUSG00000036192
Uniprot:Q8R1B8
Length = 470
Score = 158 (60.7 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C + C +D
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 80
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ V+
Sbjct: 81 CLALGMSRDAVK 92
Score = 115 (45.5 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 42/158 (26%), Positives = 70/158 (44%)
Query: 173 TSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLL 232
T ++ R + I + C+ E L Q A Y E + E QQ +
Sbjct: 219 TMSEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREA-LWQQCAIQI 277
Query: 233 TTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVL 292
T ++ + FA +I GF +LC+ DQ LL +S LE+ ++R+ + ++F G
Sbjct: 278 THAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLF-EGKYG 336
Query: 293 EKQQCQRSFGDDWLNAILEFCQ---SLHLMEIDISAFA 327
Q + DD +N +F + SL L E +I+ F+
Sbjct: 337 GMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFS 374
Score = 95 (38.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 165 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY----REPNPLEPPIA 220
QQ +T ++ + FA +I GF +LC+ DQ LL +S LE+ R NPL +
Sbjct: 271 QQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVL 330
Query: 221 EPEK---IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQEL-LFQSASL 266
K +Q F +L S D++ D L ++E+ LF SA L
Sbjct: 331 FEGKYGGMQMFKAL--GSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVL 378
>RGD|1306778 [details] [associations]
symbol:Rorb "RAR-related orphan receptor B" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007420 "brain development" evidence=IEP]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008502 "melatonin receptor activity"
evidence=IDA] [GO:0009725 "response to hormone stimulus"
evidence=IEP] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA;ISO;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO;ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:1306778 GO:GO:0005634 GO:GO:0045893 GO:GO:0007420
GO:GO:0046872 GO:GO:0007623 GO:GO:0007601 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0009725
GO:GO:0030522 GO:GO:0042462 eggNOG:NOG324222 GO:GO:0008502 PDB:1K4W
PDB:1N4H PDB:1NQ7 PDBsum:1K4W PDBsum:1N4H PDBsum:1NQ7
HOGENOM:HOG000010200 HOVERGEN:HBG106848 OrthoDB:EOG4KH2TT
EMBL:L14610 IPI:IPI00208302 IPI:IPI00829487 PIR:I65219
UniGene:Rn.231652 ProteinModelPortal:P45446 SMR:P45446
STRING:P45446 PhosphoSite:P45446 UCSC:RGD:1306778 InParanoid:P45446
EvolutionaryTrace:P45446 ArrayExpress:P45446 Genevestigator:P45446
GermOnline:ENSRNOG00000013413 Uniprot:P45446
Length = 470
Score = 158 (60.7 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C + C +D
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 80
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ V+
Sbjct: 81 CLALGMSRDAVK 92
Score = 115 (45.5 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 42/158 (26%), Positives = 70/158 (44%)
Query: 173 TSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLL 232
T ++ R + I + C+ E L Q A Y E + E QQ +
Sbjct: 219 TMSEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREA-LWQQCAIQI 277
Query: 233 TTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVL 292
T ++ + FA +I GF +LC+ DQ LL +S LE+ ++R+ + ++F G
Sbjct: 278 THAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLF-EGKYG 336
Query: 293 EKQQCQRSFGDDWLNAILEFCQ---SLHLMEIDISAFA 327
Q + DD +N +F + SL L E +I+ F+
Sbjct: 337 GMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFS 374
Score = 95 (38.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 165 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY----REPNPLEPPIA 220
QQ +T ++ + FA +I GF +LC+ DQ LL +S LE+ R NPL +
Sbjct: 271 QQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVL 330
Query: 221 EPEK---IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQEL-LFQSASL 266
K +Q F +L S D++ D L ++E+ LF SA L
Sbjct: 331 FEGKYGGMQMFKAL--GSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVL 378
>UNIPROTKB|P45446 [details] [associations]
symbol:Rorb "Nuclear receptor ROR-beta" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:1306778 GO:GO:0005634 GO:GO:0045893 GO:GO:0007420
GO:GO:0046872 GO:GO:0007623 GO:GO:0007601 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0009725
GO:GO:0030522 GO:GO:0042462 eggNOG:NOG324222 GO:GO:0008502 PDB:1K4W
PDB:1N4H PDB:1NQ7 PDBsum:1K4W PDBsum:1N4H PDBsum:1NQ7
HOGENOM:HOG000010200 HOVERGEN:HBG106848 OrthoDB:EOG4KH2TT
EMBL:L14610 IPI:IPI00208302 IPI:IPI00829487 PIR:I65219
UniGene:Rn.231652 ProteinModelPortal:P45446 SMR:P45446
STRING:P45446 PhosphoSite:P45446 UCSC:RGD:1306778 InParanoid:P45446
EvolutionaryTrace:P45446 ArrayExpress:P45446 Genevestigator:P45446
GermOnline:ENSRNOG00000013413 Uniprot:P45446
Length = 470
Score = 158 (60.7 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C + C +D
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 80
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ V+
Sbjct: 81 CLALGMSRDAVK 92
Score = 115 (45.5 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 42/158 (26%), Positives = 70/158 (44%)
Query: 173 TSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLL 232
T ++ R + I + C+ E L Q A Y E + E QQ +
Sbjct: 219 TMSEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREA-LWQQCAIQI 277
Query: 233 TTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVL 292
T ++ + FA +I GF +LC+ DQ LL +S LE+ ++R+ + ++F G
Sbjct: 278 THAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLF-EGKYG 336
Query: 293 EKQQCQRSFGDDWLNAILEFCQ---SLHLMEIDISAFA 327
Q + DD +N +F + SL L E +I+ F+
Sbjct: 337 GMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFS 374
Score = 95 (38.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 165 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY----REPNPLEPPIA 220
QQ +T ++ + FA +I GF +LC+ DQ LL +S LE+ R NPL +
Sbjct: 271 QQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVL 330
Query: 221 EPEK---IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQEL-LFQSASL 266
K +Q F +L S D++ D L ++E+ LF SA L
Sbjct: 331 FEGKYGGMQMFKAL--GSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVL 378
>UNIPROTKB|P15204 [details] [associations]
symbol:thra-a "Thyroid hormone receptor alpha-A"
species:8355 "Xenopus laevis" [GO:0004887 "thyroid hormone receptor
activity" evidence=IDA;TAS] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA;IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0046965 "retinoid X
receptor binding" evidence=IPI] [GO:0046966 "thyroid hormone
receptor binding" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0070324 "thyroid
hormone binding" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0042803 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0070324 GO:GO:0004887 HOVERGEN:HBG005606
EMBL:M35343 EMBL:X17385 EMBL:BC170071 EMBL:BC170077 PIR:S09605
RefSeq:NP_001081595.1 UniGene:Xl.309 ProteinModelPortal:P15204
GeneID:397942 KEGG:xla:397942 CTD:7067 Xenbase:XB-GENE-5966552
KO:K05547 Uniprot:P15204
Length = 418
Score = 158 (60.7 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 33/85 (38%), Positives = 42/85 (49%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXXXXXXXXXXX 100
C VC D A HY TCEGCKGFF+RT+QK Y C D C +D
Sbjct: 61 CVVCSDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDGCCIIDKITRNQCQLCRF 120
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + +L
Sbjct: 121 KKCIAVGMAMDLVLDDSKRVAKRKL 145
Score = 113 (44.8 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+ LR A R +
Sbjct: 221 EAFSEFTKIITPAITRVVDFAKKLPMFSELTCEDQIILLKGCCMEIMSLRAAVRYDPDSE 280
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + ++++Q + +AI + +SL +D + A L A+ L+
Sbjct: 281 TLTLSGEMAVKREQLKNGGLGVVSDAIFDLGRSLAAFNLDDTEVALLQAVLLM 333
Score = 77 (32.2 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+
Sbjct: 221 EAFSEFTKIITPAITRVVDFAKKLPMFSELTCEDQIILLKGCCMEI 266
>UNIPROTKB|P18115 [details] [associations]
symbol:thra-b "Thyroid hormone receptor alpha-B"
species:8355 "Xenopus laevis" [GO:0004887 "thyroid hormone receptor
activity" evidence=TAS] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046965 "retinoid X receptor
binding" evidence=IPI] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0070324 "thyroid hormone binding"
evidence=IDA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GO:GO:0042803 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0070324 GO:GO:0004887 HOVERGEN:HBG005606 EMBL:M35344
EMBL:L76285 PIR:B36067 ProteinModelPortal:P18115 SMR:P18115
Uniprot:P18115
Length = 418
Score = 158 (60.7 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 33/85 (38%), Positives = 42/85 (49%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXXXXXXXXXXX 100
C VC D A HY TCEGCKGFF+RT+QK Y C D C +D
Sbjct: 61 CVVCSDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDGCCIIDKITRNQCQLCRF 120
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + +L
Sbjct: 121 KKCIAVGMAMDLVLDDSKRVAKRKL 145
Score = 113 (44.8 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+ LR A R +
Sbjct: 221 EAFSEFTKIITPAITRVVDFAKKLPMFSELTCEDQIILLKGCCMEIMSLRAAVRYDPDSE 280
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + ++++Q + +AI + +SL +D + A L A+ L+
Sbjct: 281 TLTLSGEMAVKREQLKNGGLGVVSDAIFDLGRSLAAFNLDDTEVALLQAVLLM 333
Score = 77 (32.2 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E +F ++T ++ + FA K+P FS+L EDQ +L + +E+
Sbjct: 221 EAFSEFTKIITPAITRVVDFAKKLPMFSELTCEDQIILLKGCCMEI 266
>UNIPROTKB|O00482 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0008206 "bile acid metabolic process"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0009790 "embryo
development" evidence=TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0042592
"homeostatic process" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA;TAS] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0005543 "phospholipid binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0045070 "positive regulation of viral
genome replication" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0045893
GO:GO:0005654 GO:GO:0008206 GO:GO:0005543 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
EMBL:CH471067 GO:GO:0042632 GO:GO:0003705 GO:GO:0042127
GO:GO:0009790 GO:GO:0044212 GO:GO:0006367 GO:GO:0042592
GO:GO:0045070 PDB:3TX7 PDBsum:3TX7 eggNOG:NOG240365 PDB:1YOK
PDB:1ZDU PDB:3PLZ PDB:4DOS PDBsum:1YOK PDBsum:1ZDU PDBsum:3PLZ
PDBsum:4DOS InterPro:IPR016355 PIRSF:PIRSF002530 PDB:1YUC PDB:4DOR
PDBsum:1YUC PDBsum:4DOR CTD:2494 HOGENOM:HOG000063718
HOVERGEN:HBG106677 KO:K08027 OrthoDB:EOG470TH1 EMBL:U80251
EMBL:AF146343 EMBL:AF124247 EMBL:AF190464 EMBL:BC118571
EMBL:BC118652 EMBL:U93553 IPI:IPI00011769 IPI:IPI00217284
IPI:IPI00217285 RefSeq:NP_003813.1 RefSeq:NP_995582.1
UniGene:Hs.33446 PDB:2A66 PDBsum:2A66 ProteinModelPortal:O00482
SMR:O00482 DIP:DIP-37952N IntAct:O00482 MINT:MINT-2997724
STRING:O00482 PhosphoSite:O00482 PRIDE:O00482
Ensembl:ENST00000236914 Ensembl:ENST00000367362 GeneID:2494
KEGG:hsa:2494 UCSC:uc001gvb.3 GeneCards:GC01P199996 HGNC:HGNC:7984
HPA:HPA005455 HPA:HPA017067 MIM:604453 neXtProt:NX_O00482
PharmGKB:PA31765 InParanoid:O00482 OMA:NTFGLMC PhylomeDB:O00482
BindingDB:O00482 ChEMBL:CHEMBL3544 EvolutionaryTrace:O00482
GenomeRNAi:2494 NextBio:9851 ArrayExpress:O00482 Bgee:O00482
CleanEx:HS_NR5A2 Genevestigator:O00482 GermOnline:ENSG00000116833
Uniprot:O00482
Length = 541
Score = 206 (77.6 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 37/84 (44%), Positives = 48/84 (57%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD + HYG+ TCE CKGFFKRTVQ +Y C+ ++ C +D
Sbjct: 84 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRF 143
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
CL VGM E VR D ++G R +
Sbjct: 144 QKCLSVGMKLEAVRADRMRGGRNK 167
Score = 52 (23.4 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 23/92 (25%), Positives = 36/92 (39%)
Query: 249 FSDLCKEDQELLFQSASLELFVLRLAYR--TRAEDTKLIFCNGVVLEKQQCQRSFGDDWL 306
F +L +DQ L Q+ EL +L YR ++ + G ++ G L
Sbjct: 366 FRELKVDDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVDYSIIASQAGAT-L 424
Query: 307 NAILEFCQSL----HLMEIDISAFACLCALTL 334
N ++ Q L ++ D F CL L L
Sbjct: 425 NNLMSHAQELVAKLRSLQFDQREFVCLKFLVL 456
>UNIPROTKB|E2RGP7 [details] [associations]
symbol:RORC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072539 "T-helper 17 cell differentiation"
evidence=IEA] [GO:0048537 "mucosal-associated lymphoid tissue
development" evidence=IEA] [GO:0048535 "lymph node development"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006468
GO:GO:0033077 GO:GO:0030522 GO:GO:0048535
GeneTree:ENSGT00700000104109 GO:GO:0048537 GO:GO:0072539
OMA:AFPPLYK EMBL:AAEX03011059 Ensembl:ENSCAFT00000020479
Uniprot:E2RGP7
Length = 518
Score = 162 (62.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q Y C + CP+D
Sbjct: 31 CKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVVYSCTRQQNCPIDRTSRNRCQHCRLQK 90
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ V+
Sbjct: 91 CLALGMSRDAVK 102
Score = 111 (44.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 232 LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVV 291
LT ++ + FA ++ GF +LC+ DQ +L ++ ++E+ ++R+ R D +F G
Sbjct: 324 LTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEVVLVRMC-RAYNADNHTVFFEGKY 382
Query: 292 LEKQQCQRSFG-DDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ R+ G + +++I +F +SL + A AL LI
Sbjct: 383 -GGMELFRALGCSELISSIFDFSRSLSSLRFSEDEIALYTALVLI 426
Score = 74 (31.1 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 171 LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
LT ++ + FA ++ GF +LC+ DQ +L ++ ++E+
Sbjct: 324 LTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEV 360
>UNIPROTKB|F1SRR6 [details] [associations]
symbol:ESR2 "Estrogen receptor beta" species:9823 "Sus
scrofa" [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0060743 "epithelial cell
maturation involved in prostate gland development" evidence=IEA]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IEA]
[GO:0060068 "vagina development" evidence=IEA] [GO:0060065 "uterus
development" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0034056 "estrogen response
element binding" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0001046 "core promoter
sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005739
GO:GO:0005634 GO:GO:0001764 GO:GO:0007420 GO:GO:0051091
GO:GO:0005496 GO:GO:0046872 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0043065 GO:GO:0001541
GO:GO:0050680 GO:GO:0060740 GeneTree:ENSGT00700000104072
GO:GO:0030520 GO:GO:0060068 GO:GO:0001046 GO:GO:0060766
GO:GO:0034056 GO:GO:0060065 OMA:LYAEPQK GO:GO:0060743
InterPro:IPR021064 Pfam:PF12497 EMBL:CU686778 EMBL:AEMK01180761
Ensembl:ENSSSCT00000005632 Uniprot:F1SRR6
Length = 526
Score = 177 (67.4 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 36/106 (33%), Positives = 47/106 (44%)
Query: 5 RSSSSESPKLRHXXXXXXXXXXXGCDTSRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCK 64
RS P R + P+ + CAVC D A+ HYGV +CEGCK
Sbjct: 108 RSLEHTLPVNRETLKRKASGSSCASPVTSPSSKRDAHFCAVCSDYASGYHYGVWSCEGCK 167
Query: 65 GFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXXCLQVGMVK 110
FFKR++Q + Y+C A C +D C +VGMVK
Sbjct: 168 AFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVK 213
Score = 93 (37.8 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 218 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRT 277
P E + L + + +A KIPGF +L DQ L +S LE+ ++ L +R+
Sbjct: 285 PFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLYDQVRLLESCWLEVLMVGLMWRS 344
Query: 278 RAEDTKLIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
KLIF +VL++ + + G + + +L +++ + C+ A+ L+
Sbjct: 345 IDHPGKLIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILL 403
Score = 57 (25.1 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 157 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
P E + L + + +A KIPGF +L DQ L +S LE+
Sbjct: 285 PFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLYDQVRLLESCWLEV 335
>UNIPROTKB|F1PET8 [details] [associations]
symbol:RORB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042462 "eye
photoreceptor cell development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GO:GO:0042462 GeneTree:ENSGT00700000104109 OMA:SGHTMRA
EMBL:AAEX03000553 EMBL:AAEX03000554 Ensembl:ENSCAFT00000036494
Uniprot:F1PET8
Length = 470
Score = 158 (60.7 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C + C +D
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 80
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ V+
Sbjct: 81 CLALGMSRDAVK 92
Score = 114 (45.2 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/141 (27%), Positives = 64/141 (45%)
Query: 190 DLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGF 249
+ C+ E L Q A Y E + E QQ +T ++ + FA +I GF
Sbjct: 236 ETCQYTMEELHQLAWQTHTYEEIKAYQSKSREA-LWQQCAIQITHAIQYVVEFAKRITGF 294
Query: 250 SDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAI 309
+LC+ DQ LL +S LE+ ++R+ + ++F G Q + DD +N
Sbjct: 295 MELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLF-EGKYGGMQMFKALGSDDLVNEA 353
Query: 310 LEFCQ---SLHLMEIDISAFA 327
+F + SL L E +I+ F+
Sbjct: 354 FDFAKNLCSLQLTEEEIALFS 374
Score = 95 (38.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 165 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY----REPNPLEPPIA 220
QQ +T ++ + FA +I GF +LC+ DQ LL +S LE+ R NPL +
Sbjct: 271 QQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVL 330
Query: 221 EPEK---IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQEL-LFQSASL 266
K +Q F +L S D++ D L ++E+ LF SA L
Sbjct: 331 FEGKYGGMQMFKAL--GSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVL 378
>UNIPROTKB|P18117 [details] [associations]
symbol:thrb-a "Thyroid hormone receptor beta-A"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0004887 "thyroid hormone receptor activity" evidence=IC;TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043565 "sequence-specific
DNA binding" evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0070324 "thyroid
hormone binding" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0000122 GO:GO:0070324 GO:GO:0004887 HOVERGEN:HBG005606
EMBL:M35360 EMBL:M35359 PIR:C36067 RefSeq:NP_001090182.1
RefSeq:NP_001090533.1 UniGene:Xl.474 UniGene:Xl.60293
ProteinModelPortal:P18117 SMR:P18117 GeneID:779054 GeneID:780755
KEGG:xla:779054 KEGG:xla:780755 CTD:7068 CTD:779054
Xenbase:XB-GENE-6070716 KO:K08362 Uniprot:P18117
Length = 373
Score = 163 (62.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 34/94 (36%), Positives = 47/94 (50%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXX 91
P+ +LC VCGD A HY TCEGCKGFF+RT+QK Y C + C +D
Sbjct: 10 PSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVT 69
Query: 92 XXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V D+ + + +L
Sbjct: 70 RNQCQECRFKKCIAVGMATDLVLDDNKRLAKRKL 103
Score = 104 (41.7 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 42/178 (23%), Positives = 74/178 (41%)
Query: 158 IAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEP 217
+ +PE Q+ + L+ + H A G K+ ++ L + P E
Sbjct: 121 VQKPEPTQEEWELIQVVTEA--HVATNAQGSH--WKQKRKFLPEDIGQAPIVNAP---EG 173
Query: 218 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRT 277
+ E QF ++T ++ + FA K+P F +L EDQ +L + +E+ LR A R
Sbjct: 174 GKVDLEAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRY 233
Query: 278 RAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
E L + + + Q + +AI + SL +D + A L A+ L+
Sbjct: 234 DPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFSLDDTEVALLQAVLLM 291
>UNIPROTKB|E9PLL4 [details] [associations]
symbol:NR1H3 "Oxysterols receptor LXR-alpha" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AC018410
InterPro:IPR023257 PRINTS:PR02034 HGNC:HGNC:7966 IPI:IPI00976161
ProteinModelPortal:E9PLL4 SMR:E9PLL4 Ensembl:ENST00000481889
ArrayExpress:E9PLL4 Bgee:E9PLL4 Uniprot:E9PLL4
Length = 466
Score = 179 (68.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 35/84 (41%), Positives = 49/84 (58%)
Query: 34 PTPPS-PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXX 92
P P ++LC+VCGD A+ HY V +CEGCKGFF+R+V KG+ Y+C + CP+D
Sbjct: 43 PAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGHCPMDTYMR 102
Query: 93 XXXXXXXXXXCLQVGMVKEVVRTD 116
C Q GM +E V ++
Sbjct: 103 RKCQECRLRKCRQAGMREECVLSE 126
Score = 88 (36.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 42/184 (22%), Positives = 82/184 (44%)
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPP 218
A ++ F L SV I FA ++PGF L +EDQ L +++++E+ E ++
Sbjct: 204 ARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVA-GEGQGMKGE 262
Query: 219 IAE-------PEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVL 271
AE P I+ L S D K P S L F +A +++ +L
Sbjct: 263 -AEWDYLWEGPPDIELGEPNLLGSRDEENRPPWKRP-CSKTSPPSPRLRF-AACVQVMLL 319
Query: 272 RLAYRTRAEDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLC 330
+ R + F ++ ++ +++N I EF ++++ ++++ + FA L
Sbjct: 320 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI 379
Query: 331 ALTL 334
A+++
Sbjct: 380 AISI 383
>UNIPROTKB|F1NWF0 [details] [associations]
symbol:THRB "Thyroid hormone receptor beta" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0004887 "thyroid hormone receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887
GeneTree:ENSGT00680000099662 EMBL:AADN02001118 EMBL:AADN02001120
EMBL:AADN02001121 EMBL:AADN02001122 EMBL:AADN02001123
EMBL:AADN02001124 EMBL:AADN02001119 IPI:IPI00587738
Ensembl:ENSGALT00000018423 ArrayExpress:F1NWF0 Uniprot:F1NWF0
Length = 363
Score = 163 (62.4 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 35/94 (37%), Positives = 47/94 (50%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXX 91
P+ +LC VCGD A HY TCEGCKGFF+RT+QK Y C + C +D
Sbjct: 32 PSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYEGKCVIDKVT 91
Query: 92 XXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + +L
Sbjct: 92 RNQCQECRFKKCIFVGMATDLVLDDSKRLAKRKL 125
Score = 103 (41.3 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E QF ++T ++ + FA K+P F +L EDQ +L + +E+ LR A R E
Sbjct: 201 EAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESE 260
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + + + Q + +AI + SL +D + A L A+ L+
Sbjct: 261 TLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLM 313
Score = 73 (30.8 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E QF ++T ++ + FA K+P F +L EDQ +L + +E+
Sbjct: 201 EAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEI 246
>UNIPROTKB|Q9XSB5 [details] [associations]
symbol:ESR2 "Estrogen receptor beta" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0060743 "epithelial cell maturation involved in prostate gland
development" evidence=IEA] [GO:0060740 "prostate gland epithelium
morphogenesis" evidence=IEA] [GO:0060068 "vagina development"
evidence=IEA] [GO:0060065 "uterus development" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0034056 "estrogen response element binding"
evidence=IEA] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005739
GO:GO:0005634 GO:GO:0001764 GO:GO:0007420 GO:GO:0051091
GO:GO:0005496 GO:GO:0046872 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0043065 GO:GO:0001541
GO:GO:0050680 GO:GO:0060740 GeneTree:ENSGT00700000104072
GO:GO:0030520 GO:GO:0060068 GO:GO:0001046 GO:GO:0060766
HOVERGEN:HBG108344 HOGENOM:HOG000233468 GO:GO:0034056 GO:GO:0060065
EMBL:AF110402 EMBL:Y18017 IPI:IPI00692499 RefSeq:NP_776476.2
UniGene:Bt.541 ProteinModelPortal:Q9XSB5 SMR:Q9XSB5 STRING:Q9XSB5
Ensembl:ENSBTAT00000005899 GeneID:281146 KEGG:bta:281146 CTD:2100
eggNOG:NOG271979 InParanoid:Q9XSB5 KO:K08551 OMA:LYAEPQK
OrthoDB:EOG41RPTT ChEMBL:CHEMBL2404 NextBio:20805210 GO:GO:0060743
InterPro:IPR021064 Pfam:PF12497 Uniprot:Q9XSB5
Length = 527
Score = 177 (67.4 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 36/106 (33%), Positives = 47/106 (44%)
Query: 5 RSSSSESPKLRHXXXXXXXXXXXGCDTSRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCK 64
RS P R + P+ + CAVC D A+ HYGV +CEGCK
Sbjct: 108 RSLEHTLPVNRETLKRKASGSSCASPATSPSSKRDAHFCAVCSDYASGYHYGVWSCEGCK 167
Query: 65 GFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXXCLQVGMVK 110
FFKR++Q + Y+C A C +D C +VGMVK
Sbjct: 168 AFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVK 213
Score = 92 (37.4 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 218 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRT 277
P E + L + + +A KIPGF +L DQ L +S LE+ ++ L +R+
Sbjct: 285 PFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLYDQVRLLESCWLEVLMVGLMWRS 344
Query: 278 RAEDTKLIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
KLIF ++L++ + + G + + +L +++ + C+ A+ L+
Sbjct: 345 IDHPGKLIFAPDLILDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILL 403
Score = 57 (25.1 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 157 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
P E + L + + +A KIPGF +L DQ L +S LE+
Sbjct: 285 PFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLYDQVRLLESCWLEV 335
>UNIPROTKB|G3X7C1 [details] [associations]
symbol:THRB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008050 "female
courtship behavior" evidence=IEA] [GO:0008016 "regulation of heart
contraction" evidence=IEA] [GO:0007621 "negative regulation of
female receptivity" evidence=IEA] [GO:0007605 "sensory perception
of sound" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0008016
GO:GO:0000122 GO:GO:0009887 GO:GO:0007605 GO:GO:0031490
GO:GO:0004887 GO:GO:0007621 GO:GO:0008050
GeneTree:ENSGT00680000099662 OMA:HLIQATW EMBL:DAAA02061150
EMBL:DAAA02061151 EMBL:DAAA02061152 Ensembl:ENSBTAT00000023670
Uniprot:G3X7C1
Length = 459
Score = 167 (63.8 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 36/99 (36%), Positives = 48/99 (48%)
Query: 29 CDTSRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACP 86
C P+ +LC VCGD A HY TCEGCKGFF+RT+QK Y C + C
Sbjct: 91 CKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCV 150
Query: 87 VDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
+D C+ VGM ++V DS + + +L
Sbjct: 151 IDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKL 189
Score = 102 (41.0 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 42/176 (23%), Positives = 72/176 (40%)
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
+PE Q + L+ T + H A G K+ ++ L + P E
Sbjct: 209 KPEPTDQEWELIKTVTEA--HVATNAQGSH--WKQKRKFLPEDIGQAPIVNAP---EGGK 261
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
+ E F ++T ++ + FA K+P F +L EDQ +L + +E+ LR A R
Sbjct: 262 VDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDP 321
Query: 280 EDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
E L + + + Q + +AI + SL +D + A L A+ L+
Sbjct: 322 ESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLM 377
>UNIPROTKB|P68306 [details] [associations]
symbol:THRB "Thyroid hormone receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887 HOVERGEN:HBG005606
GeneTree:ENSGT00680000099662 eggNOG:NOG272726 HOGENOM:HOG000010313
CTD:7068 KO:K08362 EMBL:X17504 EMBL:M65207 EMBL:Z50188
IPI:IPI00657637 PIR:S09625 RefSeq:NP_990778.1 UniGene:Gga.609
ProteinModelPortal:P68306 SMR:P68306 IntAct:P68306 STRING:P68306
Ensembl:ENSGALT00000031162 GeneID:396431 KEGG:gga:396431
OrthoDB:EOG4Z8XWB NextBio:20816472 ArrayExpress:P68306
Uniprot:P68306
Length = 369
Score = 163 (62.4 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 35/94 (37%), Positives = 47/94 (50%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXX 91
P+ +LC VCGD A HY TCEGCKGFF+RT+QK Y C + C +D
Sbjct: 6 PSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYEGKCVIDKVT 65
Query: 92 XXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + +L
Sbjct: 66 RNQCQECRFKKCIFVGMATDLVLDDSKRLAKRKL 99
Score = 103 (41.3 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E QF ++T ++ + FA K+P F +L EDQ +L + +E+ LR A R E
Sbjct: 175 EAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESE 234
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + + + Q + +AI + SL +D + A L A+ L+
Sbjct: 235 TLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLM 287
Score = 73 (30.8 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E QF ++T ++ + FA K+P F +L EDQ +L + +E+
Sbjct: 175 EAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEI 220
>ZFIN|ZDB-GENE-980526-436 [details] [associations]
symbol:rxrba "retinoid x receptor, beta a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-436 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 HOVERGEN:HBG005606 GeneTree:ENSGT00690000101777
EMBL:BX890617 HOGENOM:HOG000260821 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 EMBL:AL672176 EMBL:BC054649 EMBL:U29942 EMBL:U93483
IPI:IPI00758810 PIR:I50517 RefSeq:NP_571350.1 UniGene:Dr.351
ProteinModelPortal:Q7SYN5 SMR:Q7SYN5 STRING:Q7SYN5
Ensembl:ENSDART00000009755 Ensembl:ENSDART00000102075 GeneID:30530
KEGG:dre:30530 CTD:30530 InParanoid:Q7SYN5 KO:K08525
NextBio:20806913 ArrayExpress:Q7SYN5 Bgee:Q7SYN5 Uniprot:Q7SYN5
Length = 471
Score = 196 (74.1 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 39/84 (46%), Positives = 51/84 (60%)
Query: 34 PTPP-SPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXX 92
P P S +LCA+CGD ++ +HYGV +CEGCKGFFKRTV+K Y C +K C VD
Sbjct: 115 PGPMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQR 174
Query: 93 XXXXXXXXXXCLQVGMVKEVVRTD 116
CL +GM +EVV+ +
Sbjct: 175 NRCQYCRYQKCLAMGMKREVVQDE 198
Score = 64 (27.6 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSF 301
+A +IP FS+L +DQ +L ++ EL + ++R+ ++ G+ + + S
Sbjct: 277 WAKRIPHFSELSLDDQVILLRAGWNELLIASFSHRSITVKDGILLATGLHVHRNSAH-SA 335
Query: 302 GDDWLNAILEFCQSLHLMEI 321
G + AI + +S H E+
Sbjct: 336 G---VGAIFDR-ESAHNAEV 351
Score = 50 (22.7 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLEL 207
+A +IP FS+L +DQ +L ++ EL
Sbjct: 277 WAKRIPHFSELSLDDQVILLRAGWNEL 303
>UNIPROTKB|G3V5S2 [details] [associations]
symbol:ESR2 "Estrogen receptor beta" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0030520 "intracellular estrogen receptor signaling pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0060065 "uterus
development" evidence=IEA] [GO:0060068 "vagina development"
evidence=IEA] [GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA] [GO:0060743 "epithelial cell maturation involved in
prostate gland development" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0001764 GO:GO:0007420
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0043065 GO:GO:0001541
GO:GO:0050680 GO:GO:0060740 GO:GO:0030520 GO:GO:0060068
GO:GO:0060766 GO:GO:0060065 GO:GO:0060743 InterPro:IPR021064
Pfam:PF12497 HGNC:HGNC:3468 EMBL:AL355094 EMBL:AL359235
EMBL:AL161756 ProteinModelPortal:G3V5S2 SMR:G3V5S2
Ensembl:ENST00000556275 ArrayExpress:G3V5S2 Bgee:G3V5S2
Uniprot:G3V5S2
Length = 468
Score = 173 (66.0 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 32/77 (41%), Positives = 41/77 (53%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXX 93
P + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 140 PGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRK 199
Query: 94 XXXXXXXXXCLQVGMVK 110
C +VGMVK
Sbjct: 200 SCQACRLRKCYEVGMVK 216
Score = 94 (38.1 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 43/173 (24%), Positives = 73/173 (42%)
Query: 174 SVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPP---IAEPE----KIQ 226
S D H A K +ELL + S E EPP I+ P +
Sbjct: 234 SADEQLHCAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEAS 293
Query: 227 QFYSLLTTSVDVIRH---FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTK 283
SL + + H +A KIPGF +L DQ L +S +E+ ++ L +R+ K
Sbjct: 294 MMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGK 353
Query: 284 LIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
LIF +VL++ + + G + + +L +++ + C+ A+ L+
Sbjct: 354 LIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILL 406
Score = 54 (24.1 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 157 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
P E + L + + +A KIPGF +L DQ L +S +E+
Sbjct: 288 PFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEV 338
>ZFIN|ZDB-GENE-990415-268 [details] [associations]
symbol:thrb "thyroid hormone receptor beta"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA;IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000988 "protein binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-268 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887
GO:GO:0000988 EMBL:BX927163 GeneTree:ENSGT00680000099662
EMBL:CR382334 EMBL:CU207349 ProteinModelPortal:G1K2F9
Ensembl:ENSDART00000019247 Bgee:G1K2F9 Uniprot:G1K2F9
Length = 470
Score = 164 (62.8 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 34/86 (39%), Positives = 44/86 (51%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSK--YVCLADKACPVDXXXXXXXXXXX 99
LC VCGD A HY TCEGCKGFF+RT+QK Y C + C +D
Sbjct: 1 LCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTRNQCQECR 60
Query: 100 XXXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + +L
Sbjct: 61 FKKCIAVGMATDLVLDDSKRLAKRKL 86
Score = 105 (42.0 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 32/113 (28%), Positives = 52/113 (46%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E QF ++T ++ + FA K+P F +L EDQ +L + +E+ LR A R E
Sbjct: 289 EAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESD 348
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + + + Q + +AI + SL +D S A L A+ L+
Sbjct: 349 TLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFNLDDSEVALLQAVILL 401
Score = 73 (30.8 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E QF ++T ++ + FA K+P F +L EDQ +L + +E+
Sbjct: 289 EAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEI 334
>UNIPROTKB|G3V5M5 [details] [associations]
symbol:ESR2 "Estrogen receptor beta" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 InterPro:IPR021064 Pfam:PF12497 GeneID:2100
HGNC:HGNC:3468 EMBL:AL355094 EMBL:AL359235 EMBL:AL161756
RefSeq:NP_001258805.1 ProteinModelPortal:G3V5M5 SMR:G3V5M5
Ensembl:ENST00000553796 ArrayExpress:G3V5M5 Bgee:G3V5M5
Uniprot:G3V5M5
Length = 474
Score = 173 (66.0 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 32/77 (41%), Positives = 41/77 (53%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXX 93
P + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 140 PGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRK 199
Query: 94 XXXXXXXXXCLQVGMVK 110
C +VGMVK
Sbjct: 200 SCQACRLRKCYEVGMVK 216
Score = 94 (38.1 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 43/173 (24%), Positives = 73/173 (42%)
Query: 174 SVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPP---IAEPE----KIQ 226
S D H A K +ELL + S E EPP I+ P +
Sbjct: 234 SADEQLHCAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEAS 293
Query: 227 QFYSLLTTSVDVIRH---FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTK 283
SL + + H +A KIPGF +L DQ L +S +E+ ++ L +R+ K
Sbjct: 294 MMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGK 353
Query: 284 LIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
LIF +VL++ + + G + + +L +++ + C+ A+ L+
Sbjct: 354 LIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILL 406
Score = 54 (24.1 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 157 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
P E + L + + +A KIPGF +L DQ L +S +E+
Sbjct: 288 PFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEV 338
>ZFIN|ZDB-GENE-990415-250 [details] [associations]
symbol:rorca "RAR-related orphan receptor C a"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-250 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00700000104109 EMBL:CR450766 IPI:IPI00844980
ProteinModelPortal:F1QGI9 Ensembl:ENSDART00000100484 Bgee:F1QGI9
Uniprot:F1QGI9
Length = 480
Score = 158 (60.7 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXXXX 102
C +CGD ++ HYGV TCEGCKGFF+R+ Q + Y C + C +D
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCIIDRTNRNRCQHCRLQK 69
Query: 103 CLQVGMVKEVVR 114
CL +GM ++ V+
Sbjct: 70 CLALGMSRDAVK 81
Score = 112 (44.5 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 29/111 (26%), Positives = 55/111 (49%)
Query: 226 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLI 285
QQ LT ++ + FA +I GF DL + DQ +L ++ L++ ++R+ + L+
Sbjct: 278 QQCAVQLTNAIQYVVEFAKRISGFMDLSQNDQIILLKAGCLDVLLIRMCRAYNPINNTLL 337
Query: 286 FCNGVVLEKQQCQRSFG-DDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
F +G Q + G DD ++A+ E ++L +++ A A L+
Sbjct: 338 F-DGKFASPQLFKALVGCDDLVSAVFEMAKTLSRLQLSEEEMALFTATVLL 387
Score = 78 (32.5 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 27/110 (24%), Positives = 49/110 (44%)
Query: 165 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFY----REPNPLEPPIA 220
QQ LT ++ + FA +I GF DL + DQ +L ++ L++ R NP+ +
Sbjct: 278 QQCAVQLTNAIQYVVEFAKRISGFMDLSQNDQIILLKAGCLDVLLIRMCRAYNPINNTLL 337
Query: 221 EPEKIQ--QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 268
K Q + L D++ + S L ++E+ +A++ L
Sbjct: 338 FDGKFASPQLFKALVGCDDLVSAVFEMAKTLSRLQLSEEEMALFTATVLL 387
>UNIPROTKB|F1PPW9 [details] [associations]
symbol:THRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004887 "thyroid hormone receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887
GeneTree:ENSGT00680000099662 CTD:7068 KO:K08362 OMA:HLIQATW
EMBL:AAEX03013558 RefSeq:XP_862690.2 Ensembl:ENSCAFT00000038637
GeneID:403599 KEGG:cfa:403599 Uniprot:F1PPW9
Length = 461
Score = 167 (63.8 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 36/99 (36%), Positives = 48/99 (48%)
Query: 29 CDTSRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACP 86
C P+ +LC VCGD A HY TCEGCKGFF+RT+QK Y C + C
Sbjct: 93 CKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCV 152
Query: 87 VDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
+D C+ VGM ++V DS + + +L
Sbjct: 153 IDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKL 191
Score = 100 (40.3 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 44/188 (23%), Positives = 76/188 (40%)
Query: 149 REPNPLEPPIA-EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
R L+ I +PE + + L+ T + H A G K+ ++ L +
Sbjct: 199 RRREELQKSIGHKPEPTDEEWELIKTVTEA--HVATNAQGSH--WKQKRKFLPEDIGQAP 254
Query: 208 FYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 267
P E + E F ++T ++ + FA K+P F +L EDQ +L + +E
Sbjct: 255 IVNAP---EGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCME 311
Query: 268 LFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFA 327
+ LR A R E L + + + Q + +AI + SL +D + A
Sbjct: 312 IMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVA 371
Query: 328 CLCALTLI 335
L A+ L+
Sbjct: 372 LLQAVLLM 379
>UNIPROTKB|P10828 [details] [associations]
symbol:THRB "Thyroid hormone receptor beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007621 "negative regulation of female
receptivity" evidence=IEA] [GO:0008016 "regulation of heart
contraction" evidence=IEA] [GO:0008050 "female courtship behavior"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0003714 "transcription corepressor activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0003714
GO:GO:0005654 EMBL:CH471055 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0008016
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0000122 GO:GO:0009887
GO:GO:0007605 DrugBank:DB00451 DrugBank:DB00279 GO:GO:0006367
GO:GO:0031490 GO:GO:0004887 HOVERGEN:HBG005606 GO:GO:0007621
GO:GO:0008050 PDB:2NLL PDBsum:2NLL Orphanet:97927 eggNOG:NOG272726
HOGENOM:HOG000010313 CTD:7068 KO:K08362 OrthoDB:EOG4Z8XWB
EMBL:M26747 EMBL:X04707 EMBL:AK096628 EMBL:AC012087 EMBL:AC093927
EMBL:AC098971 EMBL:AC099054 EMBL:AC112217 EMBL:BC106929
EMBL:BC106930 EMBL:AY286465 EMBL:AY286466 EMBL:AY286467
EMBL:AY286468 EMBL:AY286469 EMBL:AY286470 EMBL:AY286471 EMBL:X74497
IPI:IPI00444844 IPI:IPI00446999 PIR:A25237 PIR:S40152
RefSeq:NP_000452.2 RefSeq:NP_001121648.1 RefSeq:NP_001121649.1
RefSeq:NP_001239563.1 UniGene:Hs.187861 UniGene:Hs.713754 PDB:1BSX
PDB:1N46 PDB:1NAX PDB:1NQ0 PDB:1NQ1 PDB:1NQ2 PDB:1NUO PDB:1Q4X
PDB:1R6G PDB:1XZX PDB:1Y0X PDB:2J4A PDB:2PIN PDB:3D57 PDB:3GWS
PDB:3IMY PDB:3JZC PDBsum:1BSX PDBsum:1N46 PDBsum:1NAX PDBsum:1NQ0
PDBsum:1NQ1 PDBsum:1NQ2 PDBsum:1NUO PDBsum:1Q4X PDBsum:1R6G
PDBsum:1XZX PDBsum:1Y0X PDBsum:2J4A PDBsum:2PIN PDBsum:3D57
PDBsum:3GWS PDBsum:3IMY PDBsum:3JZC ProteinModelPortal:P10828
SMR:P10828 DIP:DIP-5991N IntAct:P10828 MINT:MINT-1508903
STRING:P10828 PhosphoSite:P10828 DMDM:586092 PRIDE:P10828
DNASU:7068 Ensembl:ENST00000280696 Ensembl:ENST00000356447
Ensembl:ENST00000396671 Ensembl:ENST00000415021
Ensembl:ENST00000416420 Ensembl:ENST00000447875 GeneID:7068
KEGG:hsa:7068 UCSC:uc003ccx.4 GeneCards:GC03M024158 HGNC:HGNC:11799
HPA:CAB002008 HPA:CAB002009 MIM:145650 MIM:188570 MIM:190160
MIM:274300 neXtProt:NX_P10828 Orphanet:3221 Orphanet:165994
PharmGKB:PA36508 OMA:HLIQATW BindingDB:P10828 ChEMBL:CHEMBL1947
EvolutionaryTrace:P10828 GenomeRNAi:7068 NextBio:27637
ArrayExpress:P10828 Bgee:P10828 CleanEx:HS_THRB
Genevestigator:P10828 GermOnline:ENSG00000151090 Uniprot:P10828
Length = 461
Score = 167 (63.8 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 36/99 (36%), Positives = 48/99 (48%)
Query: 29 CDTSRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACP 86
C P+ +LC VCGD A HY TCEGCKGFF+RT+QK Y C + C
Sbjct: 93 CKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCV 152
Query: 87 VDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
+D C+ VGM ++V DS + + +L
Sbjct: 153 IDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKL 191
Score = 100 (40.3 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 44/188 (23%), Positives = 76/188 (40%)
Query: 149 REPNPLEPPIA-EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
R L+ I +PE + + L+ T + H A G K+ ++ L +
Sbjct: 199 RRREELQKSIGHKPEPTDEEWELIKTVTEA--HVATNAQGSH--WKQKRKFLPEDIGQAP 254
Query: 208 FYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 267
P E + E F ++T ++ + FA K+P F +L EDQ +L + +E
Sbjct: 255 IVNAP---EGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCME 311
Query: 268 LFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFA 327
+ LR A R E L + + + Q + +AI + SL +D + A
Sbjct: 312 IMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVA 371
Query: 328 CLCALTLI 335
L A+ L+
Sbjct: 372 LLQAVLLM 379
>UNIPROTKB|P18119 [details] [associations]
symbol:thrb-b "Thyroid hormone receptor beta-B"
species:8355 "Xenopus laevis" [GO:0004887 "thyroid hormone receptor
activity" evidence=TAS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887 HOVERGEN:HBG005606
EMBL:M35362 EMBL:M35361 PIR:D36067 RefSeq:NP_001081250.1
UniGene:Xl.57134 ProteinModelPortal:P18119 SMR:P18119 PRIDE:P18119
GeneID:397734 KEGG:xla:397734 CTD:397734 Xenbase:XB-GENE-6252616
Uniprot:P18119
Length = 414
Score = 162 (62.1 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 35/94 (37%), Positives = 46/94 (48%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXX 91
P+ +LC VCGD A HY TCEGCKGFF+RT+QK Y C + C +D
Sbjct: 51 PSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVT 110
Query: 92 XXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
C VGM ++V DS + + +L
Sbjct: 111 RNQCQECRFKKCKTVGMATDLVLDDSKRLAKRKL 144
Score = 104 (41.7 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 44/188 (23%), Positives = 78/188 (41%)
Query: 149 REPNPLEPPIAE-PEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
R + ++ I + PE Q+ + L+ + H A G K+ ++ L +
Sbjct: 152 RRKDEIQKSIVQRPEPTQEEWELIQVVTEA--HVATNAQGSH--WKQKRKFLPEDIGQAP 207
Query: 208 FYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 267
P E + E QF ++T ++ + FA K+P F +L EDQ +L + +E
Sbjct: 208 IVNAP---EGGKVDLEAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCME 264
Query: 268 LFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFA 327
+ LR A R E L + + + Q + +AI + SL +D + A
Sbjct: 265 IMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFSLDDTEVA 324
Query: 328 CLCALTLI 335
L A+ L+
Sbjct: 325 LLQAVLLM 332
>UNIPROTKB|F5GWJ8 [details] [associations]
symbol:ESR2 "Estrogen receptor beta" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 InterPro:IPR021064 Pfam:PF12497 HGNC:HGNC:3468
EMBL:AL355094 EMBL:AL359235 EMBL:AL161756 IPI:IPI01019014
ProteinModelPortal:F5GWJ8 SMR:F5GWJ8 PRIDE:F5GWJ8
Ensembl:ENST00000542956 ArrayExpress:F5GWJ8 Bgee:F5GWJ8
Uniprot:F5GWJ8
Length = 513
Score = 173 (66.0 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 32/77 (41%), Positives = 41/77 (53%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXX 93
P + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 140 PGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRK 199
Query: 94 XXXXXXXXXCLQVGMVK 110
C +VGMVK
Sbjct: 200 SCQACRLRKCYEVGMVK 216
Score = 94 (38.1 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 43/173 (24%), Positives = 73/173 (42%)
Query: 174 SVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPP---IAEPE----KIQ 226
S D H A K +ELL + S E EPP I+ P +
Sbjct: 234 SADEQLHCAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEAS 293
Query: 227 QFYSLLTTSVDVIRH---FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTK 283
SL + + H +A KIPGF +L DQ L +S +E+ ++ L +R+ K
Sbjct: 294 MMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGK 353
Query: 284 LIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
LIF +VL++ + + G + + +L +++ + C+ A+ L+
Sbjct: 354 LIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILL 406
Score = 54 (24.1 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 157 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
P E + L + + +A KIPGF +L DQ L +S +E+
Sbjct: 288 PFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEV 338
>UNIPROTKB|F1Q2H9 [details] [associations]
symbol:ESR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00700000104072 OMA:LYAEPQK
InterPro:IPR021064 Pfam:PF12497 EMBL:AAEX03005777
Ensembl:ENSCAFT00000025107 Uniprot:F1Q2H9
Length = 549
Score = 176 (67.0 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 32/77 (41%), Positives = 42/77 (54%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXX 93
P+ + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 159 PSSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRK 218
Query: 94 XXXXXXXXXCLQVGMVK 110
C +VGMVK
Sbjct: 219 SCQACRLRKCYEVGMVK 235
Score = 91 (37.1 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 218 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRT 277
P E + L + + +A KIPGF +L DQ L +S +E+ ++ L +R+
Sbjct: 307 PFTEASMMMSLTKLADKELVHMIGWAKKIPGFVELSLYDQVRLLESCWMEVLMVGLMWRS 366
Query: 278 RAEDTKLIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
KLIF +VL++ + + G + + +L +++ + C+ A+ L+
Sbjct: 367 IDHPGKLIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMVLL 425
Score = 54 (24.1 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 157 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
P E + L + + +A KIPGF +L DQ L +S +E+
Sbjct: 307 PFTEASMMMSLTKLADKELVHMIGWAKKIPGFVELSLYDQVRLLESCWMEV 357
>UNIPROTKB|Q92731 [details] [associations]
symbol:ESR2 "Estrogen receptor beta" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001541
"ovarian follicle development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0060065 "uterus
development" evidence=IEA] [GO:0060068 "vagina development"
evidence=IEA] [GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA] [GO:0060743 "epithelial cell maturation involved in
prostate gland development" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=TAS] [GO:0030284 "estrogen receptor
activity" evidence=TAS] [GO:0048019 "receptor antagonist activity"
evidence=NAS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=NAS] [GO:0030308 "negative regulation of cell growth"
evidence=NAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005496
"steroid binding" evidence=TAS] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0034056 "estrogen response element binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IDA] [GO:0001046 "core promoter
sequence-specific DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0003677 "DNA binding" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0003707 "steroid hormone receptor activity"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007267 "cell-cell signaling" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0005576 "extracellular region"
evidence=NAS] [GO:1900116 "extracellular negative regulation of
signal transduction" evidence=NAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005739 GO:GO:0001764 GO:GO:0005576
GO:GO:0005654 GO:GO:0007420 GO:GO:0051091 EMBL:CH471061
GO:GO:0030308 DrugBank:DB01108 GO:GO:0005496 GO:GO:0046872
GO:GO:0004879 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0007267 GO:GO:0000122 GO:GO:0043065
GO:GO:0003713 GO:GO:0001541 GO:GO:0048019 DrugBank:DB00481
Pathway_Interaction_DB:er_nongenomic_pathway DrugBank:DB01128
GO:GO:0050680 GO:GO:0060740 GO:GO:0006367 GO:GO:0030520
GO:GO:0060068 GO:GO:0001046 DrugBank:DB00783 DrugBank:DB00675
GO:GO:0060766 HOVERGEN:HBG108344 GO:GO:0030284 DrugBank:DB01196
GO:GO:0034056 GO:GO:0060065 CTD:2100 eggNOG:NOG271979 KO:K08551
OMA:LYAEPQK OrthoDB:EOG41RPTT GO:GO:0060743 InterPro:IPR021064
Pfam:PF12497 EMBL:AB006590 EMBL:AF051427 EMBL:AF051428
EMBL:AF061054 EMBL:AF061055 EMBL:AF060555 EMBL:AF124790
EMBL:AF047463 EMBL:AB006589 EMBL:DQ838582 EMBL:DQ838583
EMBL:AY785359 EMBL:AK292370 EMBL:BC024181 EMBL:AF191544 EMBL:X99101
EMBL:AF074598 EMBL:AF074599 IPI:IPI00023212 IPI:IPI00218153
IPI:IPI00218155 IPI:IPI00218156 IPI:IPI00218157 IPI:IPI00218158
IPI:IPI00218159 IPI:IPI00397583 PIR:JC5939 PIR:PW0044 PIR:S71400
RefSeq:NP_001035365.1 RefSeq:NP_001035366.1 RefSeq:NP_001201831.1
RefSeq:NP_001201832.1 RefSeq:NP_001258806.1 RefSeq:NP_001428.1
UniGene:Hs.660607 UniGene:Hs.734038 PDB:1L2J PDB:1NDE PDB:1QKM
PDB:1U3Q PDB:1U3R PDB:1U3S PDB:1U9E PDB:1X76 PDB:1X78 PDB:1X7B
PDB:1X7J PDB:1YY4 PDB:1YYE PDB:1ZAF PDB:2FSZ PDB:2GIU PDB:2I0G
PDB:2JJ3 PDB:2NV7 PDB:2QTU PDB:2YJD PDB:2YLY PDB:2Z4B PDB:3OLL
PDB:3OLS PDB:3OMO PDB:3OMP PDB:3OMQ PDBsum:1L2J PDBsum:1NDE
PDBsum:1QKM PDBsum:1U3Q PDBsum:1U3R PDBsum:1U3S PDBsum:1U9E
PDBsum:1X76 PDBsum:1X78 PDBsum:1X7B PDBsum:1X7J PDBsum:1YY4
PDBsum:1YYE PDBsum:1ZAF PDBsum:2FSZ PDBsum:2GIU PDBsum:2I0G
PDBsum:2JJ3 PDBsum:2NV7 PDBsum:2QTU PDBsum:2YJD PDBsum:2YLY
PDBsum:2Z4B PDBsum:3OLL PDBsum:3OLS PDBsum:3OMO PDBsum:3OMP
PDBsum:3OMQ DisProt:DP00079 ProteinModelPortal:Q92731 SMR:Q92731
DIP:DIP-5966N IntAct:Q92731 STRING:Q92731 PhosphoSite:Q92731
DMDM:6166154 PRIDE:Q92731 Ensembl:ENST00000267525
Ensembl:ENST00000341099 Ensembl:ENST00000344288
Ensembl:ENST00000353772 Ensembl:ENST00000357782
Ensembl:ENST00000358599 Ensembl:ENST00000554572
Ensembl:ENST00000555278 Ensembl:ENST00000557772 GeneID:2100
KEGG:hsa:2100 UCSC:uc001xgy.2 UCSC:uc001xgz.2 UCSC:uc001xha.1
UCSC:uc010aqc.1 GeneCards:GC14M064550 HGNC:HGNC:3468 HPA:CAB022544
MIM:601663 neXtProt:NX_Q92731 PharmGKB:PA27886 InParanoid:Q92731
PhylomeDB:Q92731 BindingDB:Q92731 ChEMBL:CHEMBL242
EvolutionaryTrace:Q92731 GenomeRNAi:2100 NextBio:8495
PMAP-CutDB:A8K8K5 ArrayExpress:Q92731 Bgee:Q92731
Genevestigator:Q92731 GermOnline:ENSG00000140009 Uniprot:Q92731
Length = 530
Score = 173 (66.0 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 32/77 (41%), Positives = 41/77 (53%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXX 93
P + CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +D
Sbjct: 140 PGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRK 199
Query: 94 XXXXXXXXXCLQVGMVK 110
C +VGMVK
Sbjct: 200 SCQACRLRKCYEVGMVK 216
Score = 94 (38.1 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 43/173 (24%), Positives = 73/173 (42%)
Query: 174 SVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPP---IAEPE----KIQ 226
S D H A K +ELL + S E EPP I+ P +
Sbjct: 234 SADEQLHCAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEAS 293
Query: 227 QFYSLLTTSVDVIRH---FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTK 283
SL + + H +A KIPGF +L DQ L +S +E+ ++ L +R+ K
Sbjct: 294 MMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGK 353
Query: 284 LIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
LIF +VL++ + + G + + +L +++ + C+ A+ L+
Sbjct: 354 LIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILL 406
Score = 54 (24.1 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 157 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
P E + L + + +A KIPGF +L DQ L +S +E+
Sbjct: 288 PFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEV 338
>ZFIN|ZDB-GENE-040504-1 [details] [associations]
symbol:nr1d2a "nuclear receptor subfamily 1, group D,
member 2a" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040504-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887
GeneTree:ENSGT00700000104109 EMBL:CU855686 IPI:IPI01024251
Ensembl:ENSDART00000099040 ArrayExpress:F1QIC9 Bgee:F1QIC9
Uniprot:F1QIC9
Length = 504
Score = 172 (65.6 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 42 LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYV-CLADKACPVDXXXXXXXXXXXX 100
LC VCGD+A+ HYGV CEGCKGFF+R++Q+ +Y CL ++C +
Sbjct: 85 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKTESCTIVRINRNRCQQCRF 144
Query: 101 XXCLQVGMVKEVVR 114
CL VGM ++ VR
Sbjct: 145 KKCLSVGMSRDAVR 158
Score = 94 (38.1 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 26/111 (23%), Positives = 52/111 (46%)
Query: 226 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLI 285
++F +V + FA +IPGF +L + DQ L ++ + E+ ++R + +
Sbjct: 328 EEFSRSFIPAVREVVEFAKRIPGFQELSQHDQVNLLKAGTFEVLMVRFVPLFDVQQRTVS 387
Query: 286 FCNGVVLEKQQCQRSFG-DDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
F +G RS G + LN + EF + L ++++ + A+ L+
Sbjct: 388 FMSGRRYSVDLL-RSMGAGELLNCMFEFSEKLAALQLNDEEMSLFSAVVLV 437
Score = 68 (29.0 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 165 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEK 224
++F +V + FA +IPGF +L + DQ L ++ + E+ PL ++
Sbjct: 328 EEFSRSFIPAVREVVEFAKRIPGFQELSQHDQVNLLKAGTFEVLMVRFVPL---FDVQQR 384
Query: 225 IQQFYSLLTTSVDVIR 240
F S SVD++R
Sbjct: 385 TVSFMSGRRYSVDLLR 400
>UNIPROTKB|F1NWE9 [details] [associations]
symbol:THRB "Thyroid hormone receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007621 "negative regulation of female
receptivity" evidence=IEA] [GO:0008016 "regulation of heart
contraction" evidence=IEA] [GO:0008050 "female courtship behavior"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR001728 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0008016 GO:GO:0000122
GO:GO:0031490 GO:GO:0004887 GeneTree:ENSGT00680000099662
OMA:HLIQATW EMBL:AADN02001118 EMBL:AADN02001120 EMBL:AADN02001121
EMBL:AADN02001122 EMBL:AADN02001123 EMBL:AADN02001124
EMBL:AADN02001119 IPI:IPI00822476 Ensembl:ENSGALT00000018424
ArrayExpress:F1NWE9 Uniprot:F1NWE9
Length = 445
Score = 163 (62.4 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 35/94 (37%), Positives = 47/94 (50%)
Query: 34 PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACPVDXXX 91
P+ +LC VCGD A HY TCEGCKGFF+RT+QK Y C + C +D
Sbjct: 82 PSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYEGKCVIDKVT 141
Query: 92 XXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
C+ VGM ++V DS + + +L
Sbjct: 142 RNQCQECRFKKCIFVGMATDLVLDDSKRLAKRKL 175
Score = 103 (41.3 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
E QF ++T ++ + FA K+P F +L EDQ +L + +E+ LR A R E
Sbjct: 251 EAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESE 310
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
L + + + Q + +AI + SL +D + A L A+ L+
Sbjct: 311 TLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLM 363
Score = 73 (30.8 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 162 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
E QF ++T ++ + FA K+P F +L EDQ +L + +E+
Sbjct: 251 EAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEI 296
>UNIPROTKB|F1LQ07 [details] [associations]
symbol:Thrb "Thyroid hormone receptor beta" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3858 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887
GeneTree:ENSGT00680000099662 IPI:IPI01016303
Ensembl:ENSRNOT00000008989 ArrayExpress:F1LQ07 Uniprot:F1LQ07
Length = 456
Score = 166 (63.5 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 36/99 (36%), Positives = 48/99 (48%)
Query: 29 CDTSRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACP 86
C P+ +LC VCGD A HY TCEGCKGFF+RT+QK Y C + C
Sbjct: 88 CKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKSLHPSYSCKYEGKCI 147
Query: 87 VDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
+D C+ VGM ++V DS + + +L
Sbjct: 148 IDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKL 186
Score = 99 (39.9 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 45/189 (23%), Positives = 80/189 (42%)
Query: 149 REPNPLEPPIA-EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
R L+ I +PE + + L+ T + H A G K+ ++ L +
Sbjct: 194 RRREELQKSIGHKPEPTDEEWELIKTVTEA--HVATNAQGSH--WKQKRKFLPEDIGQAP 249
Query: 208 FYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 267
P E + E F ++T ++ + FA K+P F +L EDQ +L + +E
Sbjct: 250 IVNAP---EGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCME 306
Query: 268 LFVLRLAYRTRAEDTKLIFCNG-VVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAF 326
+ LR A R D++ + NG + + + Q + +AI + SL +D +
Sbjct: 307 IMSLRAAVRYDP-DSETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEV 365
Query: 327 ACLCALTLI 335
A L A+ L+
Sbjct: 366 ALLQAVLLM 374
>MGI|MGI:98743 [details] [associations]
symbol:Thrb "thyroid hormone receptor beta" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004887 "thyroid
hormone receptor activity" evidence=ISO;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0007621 "negative regulation
of female receptivity" evidence=IMP] [GO:0008016 "regulation of
heart contraction" evidence=IMP] [GO:0008050 "female courtship
behavior" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0019216 "regulation of lipid metabolic process"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=ISO;TAS] [GO:0031490 "chromatin DNA binding" evidence=IDA]
[GO:0032332 "positive regulation of chondrocyte differentiation"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045778 "positive regulation of ossification"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0090181
"regulation of cholesterol metabolic process" evidence=ISO]
[GO:0090207 "regulation of triglyceride metabolic process"
evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:98743 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0008016 GO:GO:0000122 GO:GO:0009887 GO:GO:0007605
GO:GO:0031490 GO:GO:0004887 HOVERGEN:HBG005606 GO:GO:0007621
GO:GO:0008050 GeneTree:ENSGT00680000099662 eggNOG:NOG272726
HOGENOM:HOG000010313 CTD:7068 KO:K08362 OrthoDB:EOG4Z8XWB
OMA:HLIQATW EMBL:S62756 EMBL:S62758 EMBL:U15548 EMBL:U15542
EMBL:U15543 EMBL:U15544 EMBL:U15545 EMBL:U15546 EMBL:U15547
EMBL:AK158826 EMBL:BC089035 EMBL:BC119552 EMBL:BC119553
IPI:IPI00125236 IPI:IPI00125243 PIR:A40377 PIR:A57035
RefSeq:NP_001106888.1 RefSeq:NP_033406.1 UniGene:Mm.32563
UniGene:Mm.489809 ProteinModelPortal:P37242 SMR:P37242
MINT:MINT-3374177 STRING:P37242 PhosphoSite:P37242 PRIDE:P37242
Ensembl:ENSMUST00000022303 Ensembl:ENSMUST00000022304
Ensembl:ENSMUST00000091471 GeneID:21834 KEGG:mmu:21834
UCSC:uc007shk.2 UCSC:uc007sho.2 NextBio:301286 Bgee:P37242
CleanEx:MM_THRB Genevestigator:P37242 GermOnline:ENSMUSG00000021779
Uniprot:P37242
Length = 461
Score = 166 (63.5 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 36/99 (36%), Positives = 48/99 (48%)
Query: 29 CDTSRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACP 86
C P+ +LC VCGD A HY TCEGCKGFF+RT+QK Y C + C
Sbjct: 93 CKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKSLHPSYSCKYEGKCI 152
Query: 87 VDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
+D C+ VGM ++V DS + + +L
Sbjct: 153 IDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKL 191
Score = 99 (39.9 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 45/189 (23%), Positives = 80/189 (42%)
Query: 149 REPNPLEPPIA-EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
R L+ I +PE + + L+ T + H A G K+ ++ L +
Sbjct: 199 RRREELQKSIGHKPEPTDEEWELIKTVTEA--HVATNAQGSH--WKQKRKFLPEDIGQAP 254
Query: 208 FYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 267
P E + E F ++T ++ + FA K+P F +L EDQ +L + +E
Sbjct: 255 IVNAP---EGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCME 311
Query: 268 LFVLRLAYRTRAEDTKLIFCNG-VVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAF 326
+ LR A R D++ + NG + + + Q + +AI + SL +D +
Sbjct: 312 IMSLRAAVRYDP-DSETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEV 370
Query: 327 ACLCALTLI 335
A L A+ L+
Sbjct: 371 ALLQAVLLM 379
>RGD|3858 [details] [associations]
symbol:Thrb "thyroid hormone receptor beta" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=TAS] [GO:0004887 "thyroid
hormone receptor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007605 "sensory perception
of sound" evidence=ISO] [GO:0007621 "negative regulation of female
receptivity" evidence=ISO] [GO:0008016 "regulation of heart
contraction" evidence=ISO] [GO:0008050 "female courtship behavior"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation" evidence=IMP]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0019216
"regulation of lipid metabolic process" evidence=IDA] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=TAS] [GO:0031490 "chromatin DNA
binding" evidence=ISO] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045778 "positive
regulation of ossification" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0048568 "embryonic organ development"
evidence=IEP] [GO:0090181 "regulation of cholesterol metabolic
process" evidence=IMP] [GO:0090207 "regulation of triglyceride
metabolic process" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:3858 GO:GO:0005634
GO:GO:0042803 GO:GO:0046872 GO:GO:0008284 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0090181 GO:GO:0003690 GO:GO:0032332 GO:GO:0045778 GO:GO:0048568
GO:GO:0004887 GO:GO:0090207 HOVERGEN:HBG005606 eggNOG:NOG272726
HOGENOM:HOG000010313 EMBL:J03933 EMBL:J03819 EMBL:M25071
IPI:IPI00210609 IPI:IPI00324058 PIR:A31820 PIR:A41355
UniGene:Rn.88692 PDB:3M9E PDBsum:3M9E ProteinModelPortal:P18113
SMR:P18113 STRING:P18113 PhosphoSite:P18113 UCSC:RGD:3858
InParanoid:P37826 BindingDB:P18113 ChEMBL:CHEMBL3917
EvolutionaryTrace:P18113 ArrayExpress:P18113 Genevestigator:P18113
GermOnline:ENSRNOG00000006649 Uniprot:P18113
Length = 461
Score = 166 (63.5 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 36/99 (36%), Positives = 48/99 (48%)
Query: 29 CDTSRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKG--SKYVCLADKACP 86
C P+ +LC VCGD A HY TCEGCKGFF+RT+QK Y C + C
Sbjct: 93 CKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKSLHPSYSCKYEGKCI 152
Query: 87 VDXXXXXXXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRL 125
+D C+ VGM ++V DS + + +L
Sbjct: 153 IDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKL 191
Score = 99 (39.9 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 45/189 (23%), Positives = 80/189 (42%)
Query: 149 REPNPLEPPIA-EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
R L+ I +PE + + L+ T + H A G K+ ++ L +
Sbjct: 199 RRREELQKSIGHKPEPTDEEWELIKTVTEA--HVATNAQGSH--WKQKRKFLPEDIGQAP 254
Query: 208 FYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE 267
P E + E F ++T ++ + FA K+P F +L EDQ +L + +E
Sbjct: 255 IVNAP---EGGQVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCME 311
Query: 268 LFVLRLAYRTRAEDTKLIFCNG-VVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAF 326
+ LR A R D++ + NG + + + Q + +AI + SL +D +
Sbjct: 312 IMSLRAAVRYDP-DSETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEV 370
Query: 327 ACLCALTLI 335
A L A+ L+
Sbjct: 371 ALLQAVLLM 379
>UNIPROTKB|F1LQ71 [details] [associations]
symbol:Nr5a1 "Steroidogenic factor 1" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:68350 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
InterPro:IPR016355 PIRSF:PIRSF002530 IPI:IPI00557316
Ensembl:ENSRNOT00000042720 ArrayExpress:F1LQ71 Uniprot:F1LQ71
Length = 380
Score = 200 (75.5 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 37/84 (44%), Positives = 46/84 (54%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C ++C +D
Sbjct: 11 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRF 70
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
CL VGM E VR D ++G R +
Sbjct: 71 QKCLTVGMRLEAVRADRMRGGRNK 94
Score = 49 (22.3 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 22/65 (33%), Positives = 29/65 (44%)
Query: 216 EPPIAEPEKIQQFYSLLTTSVDV----IRHFADKIPGFSDLCKEDQELLFQSASLELFVL 271
EP + P++ F SLL D I +A + F +L DQ L Q+ EL VL
Sbjct: 251 EPAKSRPDQPAPF-SLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQNCWSELLVL 309
Query: 272 RLAYR 276
YR
Sbjct: 310 DHIYR 314
>ZFIN|ZDB-GENE-060929-100 [details] [associations]
symbol:hnf4g "hepatocyte nuclear factor 4, gamma"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-060929-100 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 EMBL:BX640462 IPI:IPI00919669
ProteinModelPortal:F1QM73 Ensembl:ENSDART00000144193
ArrayExpress:F1QM73 Bgee:F1QM73 Uniprot:F1QM73
Length = 458
Score = 188 (71.2 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 51/186 (27%), Positives = 79/186 (42%)
Query: 29 CDTSRPTPPSPSQ-------LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA 81
C + PT P+ SQ CA+CGD A +HYG +C+GCKGFF+R+++K Y C
Sbjct: 41 CGENMPTEPNISQGENGVSSNCAICGDKATGKHYGASSCDGCKGFFRRSIRKSHVYSCRF 100
Query: 82 DKACPVDXXXXXXXXXXXXXXCLQVGMVKEVVRT--DSLKGRRGRLXXXXXXXXXXXXXX 139
++ C VD C + GM KE V+ D + RR
Sbjct: 101 NRQCVVDKDKRNQCRFCRLHKCFRAGMKKEAVQNERDRISSRRN--IQDSHDLPPITALA 158
Query: 140 XXXLITALYREPNPLEPPIAEPEK---IQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQ 196
++ +P+ P +K I + + V+ +A IP F +L +DQ
Sbjct: 159 HAEALSQQITAASPMGPADVSEKKSATISDVCESMKQQLLVLVEWAKYIPAFGELPLDDQ 218
Query: 197 ELLFQS 202
L ++
Sbjct: 219 VSLLRA 224
Score = 71 (30.1 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 238 VIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQC 297
V+ +A IP F +L +DQ L ++ + E +L +A R+ + L+ NG V+ +
Sbjct: 199 VLVEWAKYIPAFGELPLDDQVSLLRAHAGEHLLLGVAKRSMSYKDLLLLGNGCVIHRNCP 258
Query: 298 QRSFGDDWLNAILEFCQSLHLMEIDISAFACLCAL 332
+ G + E ++ID + +A L A+
Sbjct: 259 EPEIGRVSNRVLDELVLPFQDIQIDDNEYAALKAI 293
>UNIPROTKB|F1SRH0 [details] [associations]
symbol:NR1H4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001250 "positive regulation of ammonia assimilation
cycle" evidence=IEA] [GO:0071417 "cellular response to organic
nitrogen" evidence=IEA] [GO:0071229 "cellular response to acid"
evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=IEA] [GO:0034255 "regulation of urea metabolic process"
evidence=IEA] [GO:0032052 "bile acid binding" evidence=IEA]
[GO:0008206 "bile acid metabolic process" evidence=IEA] [GO:0005719
"nuclear euchromatin" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=IEA] [GO:0000980
"RNA polymerase II distal enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004887 "thyroid hormone receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0008206 GO:GO:0046872
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0071417 GO:GO:0003705 GO:GO:0000980
GO:GO:0001190 GO:GO:0005719 GO:GO:0071229 GO:GO:0004887
GeneTree:ENSGT00680000099585 OMA:FNKKLPA GO:GO:2001250
GO:GO:0034255 EMBL:CU457429 Ensembl:ENSSSCT00000000958
Uniprot:F1SRH0
Length = 482
Score = 159 (61.0 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 32/85 (37%), Positives = 45/85 (52%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD A+ HY TCEGCKGFF+R++ K + Y C C +D
Sbjct: 135 ELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVMDMYMRRKCQECRL 194
Query: 101 XXCLQVGMVKEVVRTD-SLKGRRGR 124
C ++GM+ E + T+ K +R R
Sbjct: 195 RKCKEMGMLAECLLTEIQCKSKRLR 219
Score = 108 (43.1 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 42/156 (26%), Positives = 75/156 (48%)
Query: 192 CKEDQELL-FQSASLELFY------REPNPLEPPIAEPE-KIQQFYSLLT---TS-VDVI 239
C+E EL Q S L+Y R P + I + E ++ + +LT TS V V+
Sbjct: 249 CREKTELTPDQQNSSSLYYGSYSKQRMPQEITNKILKEEFSAEENFLILTEMATSHVQVL 308
Query: 240 RHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQR 299
F K+PGF L EDQ L + +++E LR A + KL + +LE++ +
Sbjct: 309 VEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSA---EIFNRKLPAGHTDLLEERIRKS 365
Query: 300 SFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
D+++ + F +S+ +++ +A L A+ ++
Sbjct: 366 GISDEYITPMFSFYKSIAELKMTQEEYALLTAIVIL 401
Score = 71 (30.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 170 LLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE-LFYR 210
+ T+ V V+ F K+PGF L EDQ L + +++E +F R
Sbjct: 300 MATSHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLR 341
>UNIPROTKB|Q8JHU2 [details] [associations]
symbol:FXR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000980 "RNA polymerase
II distal enhancer sequence-specific DNA binding" evidence=IEA]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0008206 "bile acid metabolic process"
evidence=IEA] [GO:0032052 "bile acid binding" evidence=IEA]
[GO:0034255 "regulation of urea metabolic process" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IEA] [GO:0071229
"cellular response to acid" evidence=IEA] [GO:0071417 "cellular
response to organic nitrogen" evidence=IEA] [GO:2001250 "positive
regulation of ammonia assimilation cycle" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR001728 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0008206 GO:GO:0046872 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071417 GO:GO:0003705 GO:GO:0000980 GO:GO:0001190
GO:GO:0005719 GO:GO:0071229 GO:GO:0004887
GeneTree:ENSGT00680000099585 HOVERGEN:HBG108655 CTD:9971
eggNOG:NOG302915 HOGENOM:HOG000220843 KO:K08537 OMA:FNKKLPA
GO:GO:2001250 GO:GO:0034255 EMBL:AADN02005984 EMBL:AF492497
IPI:IPI00603256 RefSeq:NP_989444.1 UniGene:Gga.127 HSSP:Q96RI1
SMR:Q8JHU2 STRING:Q8JHU2 Ensembl:ENSGALT00000018929 GeneID:373902
KEGG:gga:373902 InParanoid:Q8JHU2 NextBio:20813434 Uniprot:Q8JHU2
Length = 473
Score = 163 (62.4 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 33/85 (38%), Positives = 45/85 (52%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD A+ HY TCEGCKGFF+R++ K + Y C C +D
Sbjct: 126 ELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCEMDMYMRRKCQECRL 185
Query: 101 XXCLQVGMVKEVVRTD-SLKGRRGR 124
C Q+GM+ E + T+ K +R R
Sbjct: 186 RKCKQMGMLAECLLTEIQCKSKRLR 210
Score = 103 (41.3 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 231 LLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGV 290
+ T+ V V+ F K+PGF L EDQ L + +++E LR A KL + V
Sbjct: 291 MATSHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSA---EIFSRKLPTGHTV 347
Query: 291 VLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+LE++ D+++ + F +S+ +++ +A L A+ ++
Sbjct: 348 LLEERIRNSGISDEFITPMFNFYKSIGELKMTQEEYALLTAIVIL 392
Score = 71 (30.1 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 170 LLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE-LFYR 210
+ T+ V V+ F K+PGF L EDQ L + +++E +F R
Sbjct: 291 MATSHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLR 332
>UNIPROTKB|Q5T6F6 [details] [associations]
symbol:NR5A1 "Steroidogenic factor 1" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001553 "luteinization" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0009888 "tissue development" evidence=IEA]
[GO:0010259 "multicellular organismal aging" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030325
"adrenal gland development" evidence=IEA] [GO:0042445 "hormone
metabolic process" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0051457 "maintenance of protein location in nucleus"
evidence=IEA] [GO:2000020 "positive regulation of male gonad
development" evidence=IEA] [GO:2000195 "negative regulation of
female gonad development" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0030154 GO:GO:0030325 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 GO:GO:0008584
GO:GO:0006366 GO:GO:0003690 GO:GO:0051457 GO:GO:0001553
GO:GO:0009888 GO:GO:2000195 EMBL:AL137846 EMBL:AL354979
UniGene:Hs.495108 HGNC:HGNC:7983 IPI:IPI00640780 SMR:Q5T6F6
Ensembl:ENST00000455734 HOGENOM:HOG000144632 Uniprot:Q5T6F6
Length = 178
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 37/84 (44%), Positives = 46/84 (54%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C ++C +D
Sbjct: 11 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRF 70
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
CL VGM E VR D ++G R +
Sbjct: 71 QKCLTVGMRLEAVRADRMRGGRNK 94
>UNIPROTKB|Q13285 [details] [associations]
symbol:NR5A1 "Steroidogenic factor 1" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001553 "luteinization" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0009888 "tissue development" evidence=IEA] [GO:0010259
"multicellular organismal aging" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030325 "adrenal gland
development" evidence=IEA] [GO:0042445 "hormone metabolic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IEA] [GO:2000195 "negative regulation of female
gonad development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005543 "phospholipid binding"
evidence=IDA] [GO:0050810 "regulation of steroid biosynthetic
process" evidence=TAS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:2000020 "positive
regulation of male gonad development" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=TAS] [GO:0007267 "cell-cell
signaling" evidence=TAS] [GO:0007538 "primary sex determination"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005654 GO:GO:0030154 GO:GO:0030325
GO:GO:0050810 GO:GO:0005543 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:CH471090
GO:GO:0045944 GO:GO:0007267 GO:GO:0003682 GO:GO:0003705
GO:GO:0008584 GO:GO:0003713 GO:GO:0003690 GO:GO:0006367
GO:GO:0051457 Orphanet:243 Orphanet:619 GO:GO:0001553 Orphanet:242
GO:GO:2000020 GO:GO:0007538 Orphanet:168558 GO:GO:0009888
GO:GO:2000195 eggNOG:NOG240365 Orphanet:251510 EMBL:AL137846
PDB:1ZDT PDBsum:1ZDT InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 EMBL:AL354979
CleanEx:HS_SF1 CTD:2516 KO:K08560 OMA:PFGLMCK OrthoDB:EOG4FJ891
EMBL:U76388 EMBL:D88155 EMBL:BC032501 EMBL:U32592 IPI:IPI00012446
PIR:JC4972 RefSeq:NP_004950.2 UniGene:Hs.495108 PDB:1YOW
PDBsum:1YOW ProteinModelPortal:Q13285 SMR:Q13285 IntAct:Q13285
MINT:MINT-215481 STRING:Q13285 PhosphoSite:Q13285 DMDM:3121738
PRIDE:Q13285 DNASU:2516 Ensembl:ENST00000373588 GeneID:2516
KEGG:hsa:2516 UCSC:uc004boo.1 GeneCards:GC09M127243 HGNC:HGNC:7983
MIM:184757 MIM:612964 MIM:612965 MIM:613957 neXtProt:NX_Q13285
PharmGKB:PA31764 InParanoid:Q13285 PhylomeDB:Q13285
BindingDB:Q13285 ChEMBL:CHEMBL4666 EvolutionaryTrace:Q13285
GenomeRNAi:2516 NextBio:9909 ArrayExpress:Q13285 Bgee:Q13285
CleanEx:HS_NR5A1 Genevestigator:Q13285 GermOnline:ENSG00000136931
Uniprot:Q13285
Length = 461
Score = 200 (75.5 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 37/84 (44%), Positives = 46/84 (54%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXXXXXXXXX 100
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C ++C +D
Sbjct: 11 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRF 70
Query: 101 XXCLQVGMVKEVVRTDSLKGRRGR 124
CL VGM E VR D ++G R +
Sbjct: 71 QKCLTVGMRLEAVRADRMRGGRNK 94
Score = 52 (23.4 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 30/123 (24%), Positives = 47/123 (38%)
Query: 216 EPPIAEPEKIQQFYSLLTTSVDV----IRHFADKIPGFSDLCKEDQELLFQSASLELFVL 271
EP + P++ F LL D I +A + F +L DQ L Q+ EL V
Sbjct: 250 EPTKSRPDQPAAF-GLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQNCWSELLVF 308
Query: 272 RLAYRT--RAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAIL---EFCQSLHLMEIDISAF 326
YR ++ ++ G +E G + +L E L +++D F
Sbjct: 309 DHIYRQVQHGKEGSILLVTGQEVELTTVATQAGSLLHSLVLRAQELVLQLLALQLDRQEF 368
Query: 327 ACL 329
CL
Sbjct: 369 VCL 371
>ZFIN|ZDB-GENE-980526-36 [details] [associations]
symbol:rxrga "retinoid x receptor, gamma a"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0004886 "9-cis
retinoic acid receptor activity" evidence=IDA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-36 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 HOVERGEN:HBG005606 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 KO:K08524 EMBL:U29940 EMBL:BC059576
IPI:IPI00511229 PIR:I50515 RefSeq:NP_571292.2 UniGene:Dr.348
ProteinModelPortal:Q90416 SMR:Q90416 STRING:Q90416 GeneID:30464
KEGG:dre:30464 CTD:30464 OrthoDB:EOG42RD7K NextBio:20806858
ArrayExpress:Q90416 Uniprot:Q90416
Length = 441
Score = 212 (79.7 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 54/180 (30%), Positives = 86/180 (47%)
Query: 35 TPPSPSQ-LCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDXXXXX 93
+P S S+ +CA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C +D
Sbjct: 108 SPGSLSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCQIDKRQRN 167
Query: 94 XXXXXXXXXCLQVGMVKEVVRTDSLKGRRGRLXXXXXXXXXXXXXXXXXLITA-LYREPN 152
CL +GM +E V+ + +GR ++ A L EP
Sbjct: 168 RCQYCRYQKCLAMGMKREAVQEERQRGRERSDNEVDSSSSFNEEMPVEKILDAELAVEPK 227
Query: 153 P---LEPPIAEP--EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLEL 207
+E ++ + + + + +A +IP FSDL +DQ +L ++ EL
Sbjct: 228 TEAYMESSMSNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNEL 287
>UNIPROTKB|Q91379 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2 group E member
1" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 KO:K08545 EMBL:S72373
IPI:IPI00600540 PIR:S48074 RefSeq:NP_990501.1 UniGene:Gga.3535
ProteinModelPortal:Q91379 PRIDE:Q91379 GeneID:396082
KEGG:gga:396082 CTD:7101 NextBio:20816140 Uniprot:Q91379
Length = 385
Score = 164 (62.8 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADK--ACPVDXXXXXXXXXXXX 100
C VCGD ++ +HYGV C+GC GFFKR++++ YVC + CPVD
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 75
Query: 101 XXCLQVGMVKEVVR 114
CL+V M K+ V+
Sbjct: 76 KKCLEVNMNKDAVQ 89
Score = 95 (38.5 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFC----NGVVLEKQQC 297
+A +P FS L +DQ +L + A ELFVL +A D + NG + Q+
Sbjct: 199 WAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTDSQKL 258
Query: 298 QRSFGDDWLNAILEFCQSLHLMEIDISAFACL-CALT 333
+ + + A+ E + +D + FACL C +T
Sbjct: 259 NKIISE--IQALQEVVARFRQLRLDATEFACLKCIVT 293
Score = 56 (24.8 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLELF 208
+A +P FS L +DQ +L + A ELF
Sbjct: 199 WAKSVPAFSTLSLQDQLMLLEDAWRELF 226
>UNIPROTKB|F1MN68 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 GO:GO:0021764
GO:GO:0021872 GO:GO:0090049 OMA:ILLEDAW EMBL:DAAA02025945
IPI:IPI00823513 RefSeq:NP_001179582.1 UniGene:Bt.85086 PRIDE:F1MN68
Ensembl:ENSBTAT00000018594 GeneID:528156 KEGG:bta:528156
NextBio:20874755 Uniprot:F1MN68
Length = 385
Score = 164 (62.8 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADK--ACPVDXXXXXXXXXXXX 100
C VCGD ++ +HYGV C+GC GFFKR++++ YVC + CPVD
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 75
Query: 101 XXCLQVGMVKEVVR 114
CL+V M K+ V+
Sbjct: 76 KKCLEVNMNKDAVQ 89
Score = 95 (38.5 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFC----NGVVLEKQQC 297
+A +P FS L +DQ +L + A ELFVL +A D + NG + Q+
Sbjct: 199 WAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTDSQKL 258
Query: 298 QRSFGDDWLNAILEFCQSLHLMEIDISAFACL-CALT 333
+ + + A+ E + +D + FACL C +T
Sbjct: 259 NKIISE--IQALQEVVARFRQLRLDATEFACLKCIVT 293
Score = 56 (24.8 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLELF 208
+A +P FS L +DQ +L + A ELF
Sbjct: 199 WAKSVPAFSTLSLQDQLMLLEDAWRELF 226
>UNIPROTKB|F1PD89 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 EMBL:AAEX03008592
RefSeq:XP_532253.2 ProteinModelPortal:F1PD89
Ensembl:ENSCAFT00000006050 GeneID:475017 KEGG:cfa:475017
Uniprot:F1PD89
Length = 385
Score = 164 (62.8 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADK--ACPVDXXXXXXXXXXXX 100
C VCGD ++ +HYGV C+GC GFFKR++++ YVC + CPVD
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 75
Query: 101 XXCLQVGMVKEVVR 114
CL+V M K+ V+
Sbjct: 76 KKCLEVNMNKDAVQ 89
Score = 95 (38.5 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFC----NGVVLEKQQC 297
+A +P FS L +DQ +L + A ELFVL +A D + NG + Q+
Sbjct: 199 WAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTDSQKL 258
Query: 298 QRSFGDDWLNAILEFCQSLHLMEIDISAFACL-CALT 333
+ + + A+ E + +D + FACL C +T
Sbjct: 259 NKIISE--IQALQEVVARFRQLRLDATEFACLKCIVT 293
Score = 56 (24.8 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLELF 208
+A +P FS L +DQ +L + A ELF
Sbjct: 199 WAKSVPAFSTLSLQDQLMLLEDAWRELF 226
>UNIPROTKB|Q9Y466 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2 group E member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0002118
"aggressive behavior" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0008347 "glial cell migration" evidence=IEA]
[GO:0021542 "dentate gyrus development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021772 "olfactory bulb
development" evidence=IEA] [GO:0021819 "layer formation in cerebral
cortex" evidence=IEA] [GO:0021872 "forebrain generation of neurons"
evidence=IEA] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=IEA] [GO:0021960 "anterior commissure morphogenesis"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0048712 "negative regulation of astrocyte differentiation"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0060164 "regulation of timing of neuron
differentiation" evidence=IEA] [GO:0060291 "long-term synaptic
potentiation" evidence=IEA] [GO:0090049 "regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:2000178 "negative regulation of neural precursor cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000648
"positive regulation of stem cell proliferation" evidence=IEA]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0043066 GO:GO:0007399 GO:GO:0005654
GO:GO:0046872 GO:GO:0060291 GO:GO:0007601 GO:GO:0001078
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665
GO:GO:0045766 GO:GO:0001077 GO:GO:0048814 GO:GO:0060041
GO:GO:0035176 GO:GO:0035019 GO:GO:0001662 GO:GO:0006367
GO:GO:0045165 GO:GO:0008347 GO:GO:0045787 GO:GO:2000179
GO:GO:0048712 GO:GO:0021960 GO:GO:0021542 GO:GO:2000178
GO:GO:0002118 GO:GO:0021772 GO:GO:0021819 HOGENOM:HOG000260820
HOVERGEN:HBG005606 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
eggNOG:NOG277339 KO:K08545 CTD:7101 EMBL:Y13276 EMBL:AF220532
EMBL:AF411525 EMBL:AL078596 EMBL:BC028031 IPI:IPI00843777
RefSeq:NP_003260.1 UniGene:Hs.157688 ProteinModelPortal:Q9Y466
SMR:Q9Y466 STRING:Q9Y466 PhosphoSite:Q9Y466 DMDM:9910804
PRIDE:Q9Y466 DNASU:7101 Ensembl:ENST00000368986 GeneID:7101
KEGG:hsa:7101 UCSC:uc003psg.3 GeneCards:GC06P108487 HGNC:HGNC:7973
HPA:HPA036954 MIM:603849 neXtProt:NX_Q9Y466 PharmGKB:PA31756
OrthoDB:EOG4ZCT4Q PhylomeDB:Q9Y466 ChEMBL:CHEMBL1961788
GenomeRNAi:7101 NextBio:27781 ArrayExpress:Q9Y466 Bgee:Q9Y466
CleanEx:HS_NR2E1 Genevestigator:Q9Y466 GermOnline:ENSG00000112333
GO:GO:0021764 GO:GO:0021872 GO:GO:0090049 Uniprot:Q9Y466
Length = 385
Score = 164 (62.8 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADK--ACPVDXXXXXXXXXXXX 100
C VCGD ++ +HYGV C+GC GFFKR++++ YVC + CPVD
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 75
Query: 101 XXCLQVGMVKEVVR 114
CL+V M K+ V+
Sbjct: 76 KKCLEVNMNKDAVQ 89
Score = 95 (38.5 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 242 FADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFC----NGVVLEKQQC 297
+A +P FS L +DQ +L + A ELFVL +A D + NG + Q+
Sbjct: 199 WAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTDSQKL 258
Query: 298 QRSFGDDWLNAILEFCQSLHLMEIDISAFACL-CALT 333
+ + + A+ E + +D + FACL C +T
Sbjct: 259 NKIISE--IQALQEVVARFRQLRLDATEFACLKCIVT 293
Score = 56 (24.8 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 181 FADKIPGFSDLCKEDQELLFQSASLELF 208
+A +P FS L +DQ +L + A ELF
Sbjct: 199 WAKSVPAFSTLSLQDQLMLLEDAWRELF 226
WARNING: HSPs involving 494 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 335 293 0.00091 115 3 11 22 0.48 33
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 744
No. of states in DFA: 603 (64 KB)
Total size of DFA: 203 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.42u 0.09s 25.51t Elapsed: 00:00:14
Total cpu time: 25.49u 0.09s 25.58t Elapsed: 00:00:15
Start: Thu Aug 15 11:55:42 2013 End: Thu Aug 15 11:55:57 2013
WARNINGS ISSUED: 2