RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2643
(134 letters)
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 53.8 bits (130), Expect = 7e-12
Identities = 22/32 (68%), Positives = 26/32 (81%)
Query: 48 IHTGEKPHKCVVCGKAFSQSSNLITHLRKHTG 79
IH+GEKP+ CV CGKAFS+SS L+ H R HTG
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 43.8 bits (104), Expect = 7e-08
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 20 IHSDTRPYPCQYCGKRFHQKSDMKKHTYIHTGE 52
IHS +PY C CGK F + S + +H +HTGE
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 33.7 bits (78), Expect = 3e-04
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 77 HTGYKPFSCGLCDKAFQRKVDLRRHR 102
H+G KP+ C C KAF R L +H+
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQ 27
Score = 30.7 bits (70), Expect = 0.004
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 1 CKQCGKTFKRSSTLSTHLLIHS 22
C +CGK F RSS L H +H+
Sbjct: 10 CVECGKAFSRSSILVQHQRVHT 31
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 48.9 bits (117), Expect = 8e-10
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 48 IHTGEKPHKCVVCGKAFSQSSNLITHLRKHTG 79
HTGEKP+ C C K F Q L H +++
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 38.9 bits (91), Expect = 5e-06
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 20 IHSDTRPYPCQYCGKRFHQKSDMKKHTYIHTGEK 53
H+ +PY C +C K F QK + H +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 33.9 bits (78), Expect = 3e-04
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 75 RKHTGYKPFSCGLCDKAFQRKVDLRRHRESQH 106
R HTG KP++C CDK F++K L H + H
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32
Score = 30.4 bits (69), Expect = 0.006
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 1 CKQCGKTFKRSSTLSTHLLIHSDT 24
C C KTF++ L H + D
Sbjct: 11 CSHCDKTFRQKQLLDMHFKRYHDP 34
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 48.8 bits (117), Expect = 8e-10
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 50 TGEKPHKCVVCGKAFSQSSNLITHLRK-HTGYKPFSC 85
+ KP+ C CGK FS+ +L H+++ HT +P C
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 47.7 bits (114), Expect = 2e-09
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 22 SDTRPYPCQYCGKRFHQKSDMKKHT-YIHTGEKPHKCVV 59
S +PY CQ CGK F + + H +HT E+PHKC V
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 34.6 bits (80), Expect = 2e-04
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 1 CKQCGKTFKRSSTLSTHL-LIHSDTRPYPCQ 30
C+ CGK F R L+ H+ +H+ RP+ CQ
Sbjct: 8 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 30.7 bits (70), Expect = 0.005
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 81 KPFSCGLCDKAFQRKVDLRRHRESQHPG 108
KP+ C C K F R L H + H
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTS 31
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 48.1 bits (115), Expect = 1e-09
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 48 IHTGEKPHKCVVCGKAFSQSSNLITHLRKHTG 79
H+GEKP++C +C F+QS + H+ +
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHT 33
Score = 36.1 bits (84), Expect = 4e-05
Identities = 13/34 (38%), Positives = 14/34 (41%)
Query: 20 IHSDTRPYPCQYCGKRFHQKSDMKKHTYIHTGEK 53
HS +PY C C RF Q MK H E
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 36.1 bits (84), Expect = 6e-05
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 75 RKHTGYKPFSCGLCDKAFQRKVDLRRHRESQH 106
R H+G KP+ C +C F + ++ H +H
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 27.6 bits (62), Expect = 0.081
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 1 CKQCGKTFKRSSTLSTHLLIH 21
C C F +S T+ H+L
Sbjct: 11 CYICHARFTQSGTMKMHILQK 31
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 48.1 bits (114), Expect = 2e-09
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 25 RPYPCQYCGKRFHQKSDMKKHTYIHTGEKPHKCVVCGKAFSQSSNLITHLRKH 77
+ YPCQ CGK F KS +H +H G +P+ C VCGK F +L+ H++ H
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 42.7 bits (100), Expect = 3e-07
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 52 EKPHKCVVCGKAFSQSSNLITHLRKHTGYKPFSCGLCDKAFQRKVDLRRHR 102
+K + C CGK+F+ S H+ H G +P+ CG+C K F+ K L H
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 50
Score = 41.2 bits (96), Expect = 1e-06
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 3 QCGKTFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTYIH 49
QCGK+F S H+ +H RPY C CGK+F K + H IH
Sbjct: 7 QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 27.0 bits (59), Expect = 0.21
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 1 CKQCGKTFKRSSTLSTHLLIH 21
C CGK FK L H+ IH
Sbjct: 33 CGVCGKKFKMKHHLVGHMKIH 53
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 47.0 bits (112), Expect = 4e-09
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 45 HTYIHTGEKPHKCVVCGKAFSQSSNLITHLRKHTG 79
T TG KP +C C ++FS+S +L H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 33.6 bits (77), Expect = 4e-04
Identities = 6/35 (17%), Positives = 12/35 (34%)
Query: 17 HLLIHSDTRPYPCQYCGKRFHQKSDMKKHTYIHTG 51
+ +P+ C C + F + + H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 33.2 bits (76), Expect = 7e-04
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 73 HLRKHTGYKPFSCGLCDKAFQRKVDLRRHR 102
R TG KPF C CD++F R L HR
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHR 31
Score = 25.8 bits (57), Expect = 0.36
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 1 CKQCGKTFKRSSTLSTHLLIH 21
C C ++F RS L+ H H
Sbjct: 14 CPDCDRSFSRSDHLALHRKRH 34
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId:
9606]}
Length = 38
Score = 45.5 bits (108), Expect = 1e-08
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 44 KHTYIHTGEKPHKCVVCGKAFSQSSNLITHLRKHTG 79
+ + + +KC CGK+FS SS+L H R HTG
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 37.8 bits (88), Expect = 1e-05
Identities = 15/36 (41%), Positives = 17/36 (47%)
Query: 17 HLLIHSDTRPYPCQYCGKRFHQKSDMKKHTYIHTGE 52
+ R Y C CGK F SD+ KH HTGE
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 29.7 bits (67), Expect = 0.011
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 73 HLRKHTGYKPFSCGLCDKAFQRKVDLRRHR 102
+ + + C C K+F DL +HR
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHR 32
Score = 24.0 bits (52), Expect = 1.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 1 CKQCGKTFKRSSTLSTHLLIHS 22
C +CGK+F SS LS H H+
Sbjct: 15 CDECGKSFSHSSDLSKHRRTHT 36
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 45.3 bits (108), Expect = 1e-08
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 52 EKPHKCVVCGKAFSQSSNLITHLRKHTG 79
+KP +C +C + FS+S +L TH+R HTG
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 37.2 bits (87), Expect = 2e-05
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 25 RPYPCQYCGKRFHQKSDMKKHTYIHTG 51
+P+ C+ C + F + + H HTG
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 31.0 bits (71), Expect = 0.003
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 1 CKQCGKTFKRSSTLSTHLLIHS 22
C+ C + F RS L+TH+ H+
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHT 27
Score = 27.2 bits (61), Expect = 0.11
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 81 KPFSCGLCDKAFQRKVDLRRHR 102
KPF C +C + F R L H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHI 23
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 43.8 bits (104), Expect = 6e-08
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 53 KPHKCVVCGKAFSQSSNLITHLRKHTGYK 81
+ C VC +AF++ +L H R HT K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 42.2 bits (100), Expect = 2e-07
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 25 RPYPCQYCGKRFHQKSDMKKHTYIHTGEK 53
R + C+ C + F ++ +K+H HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 30.7 bits (70), Expect = 0.005
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 1 CKQCGKTFKRSSTLSTHLLIHS 22
C+ C + F R L H H+
Sbjct: 5 CEVCTRAFARQEHLKRHYRSHT 26
Score = 27.6 bits (62), Expect = 0.065
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 81 KPFSCGLCDKAFQRKVDLRRHR 102
+ F C +C +AF R+ L+RH
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHY 22
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 35
Score = 42.8 bits (101), Expect = 2e-07
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 49 HTGEKPHKCVVCGKAFSQSSNLITHLRKHTG 79
+G++P C +C AF+ +N HL+ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 33.6 bits (77), Expect = 4e-04
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 21 HSDTRPYPCQYCGKRFHQKSDMKKHTYIHTGE 52
S RP+ C+ C F K++ +H +HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 30.1 bits (68), Expect = 0.010
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 77 HTGYKPFSCGLCDKAFQRKVDLRRHR 102
+G +PF C +C AF K + RH
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHL 27
Score = 27.8 bits (62), Expect = 0.068
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1 CKQCGKTFKRSSTLSTHLLIHSDT 24
C+ C F + + HL +H+DT
Sbjct: 10 CRICLSAFTTKANCARHLKVHTDT 33
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 41.6 bits (98), Expect = 4e-07
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 56 KCVVCGKAFSQSSNLITHLRKHTGYKPFSC 85
CGK+F+ +L H++ H+ + + C
Sbjct: 5 PEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 41.2 bits (97), Expect = 7e-07
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 28 PCQYCGKRFHQKSDMKKHTYIHTGEKPHKC 57
P CGK F+ K +K+H +H+ + + C
Sbjct: 5 PEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 36.2 bits (84), Expect = 4e-05
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 1 CKQCGKTFKRSSTLSTHLLIHSDTRPYPCQY 31
CGK+F L H+ +HSDTR Y C++
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 40.3 bits (95), Expect = 1e-06
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 53 KPHKCVVCGKAFSQSSNLITHLRKHT 78
KP+KC+ CGKAFSQ+S LI H R HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 31.8 bits (73), Expect = 0.002
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 25 RPYPCQYCGKRFHQKSDMKKHTYIHT 50
+PY C CGK F Q S + H IHT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 30.6 bits (70), Expect = 0.005
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 1 CKQCGKTFKRSSTLSTHLLIHS 22
C +CGK F ++S L H IH+
Sbjct: 5 CLECGKAFSQNSGLINHQRIHT 26
Score = 24.9 bits (55), Expect = 0.68
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 81 KPFSCGLCDKAFQRKVDLRRHR 102
KP+ C C KAF + L H+
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQ 22
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 30
Score = 40.4 bits (95), Expect = 1e-06
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Query: 53 KPHKC--VVCGKAFSQSSNLITHLRKHTG 79
KPHKC C K++S+ NL THLR HTG
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29
Score = 35.0 bits (81), Expect = 1e-04
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 25 RPYPCQY--CGKRFHQKSDMKKHTYIHTGE 52
+P+ C + C K + + ++K H HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 26.5 bits (59), Expect = 0.17
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 4 CGKTFKRSSTLSTHLLIHS 22
C K++ R L THL H+
Sbjct: 10 CRKSYSRLENLKTHLRSHT 28
Score = 22.7 bits (49), Expect = 3.8
Identities = 8/24 (33%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Query: 81 KPFSC--GLCDKAFQRKVDLRRHR 102
KP C C K++ R +L+ H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHL 24
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 40.4 bits (95), Expect = 1e-06
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 53 KPHKCVVCGKAFSQSSNLITHLRKHTGYK 81
K C C K F +S +L H++ H K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 39.2 bits (92), Expect = 3e-06
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 25 RPYPCQYCGKRFHQKSDMKKHTYIHTGEK 53
+ + C C KRF + + KH H +K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 28.1 bits (63), Expect = 0.049
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 1 CKQCGKTFKRSSTLSTHLLIHS 22
C +C K F RS LS H+ H
Sbjct: 5 CPECPKRFMRSDHLSKHIKTHQ 26
Score = 25.8 bits (57), Expect = 0.35
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 81 KPFSCGLCDKAFQRKVDLRRHR 102
K F+C C K F R L +H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHI 22
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 39.6 bits (93), Expect = 2e-06
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 53 KPHKC--VVCGKAFSQSSNLITHLRKHTG 79
+P+ C C + FS+S++L H+R HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 32.3 bits (74), Expect = 0.001
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 25 RPYPCQY--CGKRFHQKSDMKKHTYIHTG 51
RPY C C +RF + +D+ +H IHTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 25.7 bits (57), Expect = 0.30
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 4 CGKTFKRSSTLSTHLLIHS 22
C + F RS+ L+ H+ IH+
Sbjct: 10 CDRRFSRSADLTRHIRIHT 28
Score = 21.9 bits (47), Expect = 6.9
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Query: 81 KPFSC--GLCDKAFQRKVDLRRHR 102
+P++C CD+ F R DL RH
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHI 24
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 39.2 bits (92), Expect = 3e-06
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 52 EKPHKCVV--CGKAFSQSSNLITHLRKHTG 79
++P+ C C KAF ++ +LI H + H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30
Score = 32.3 bits (74), Expect = 0.001
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 25 RPYPCQY--CGKRFHQKSDMKKHTYIHTGE 52
RPY C + C K F + D+ +H H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 25.8 bits (57), Expect = 0.36
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 4 CGKTFKRSSTLSTHLLIHS 22
C K F R+ L H H
Sbjct: 11 CDKAFVRNHDLIRHKKSHQ 29
Score = 22.7 bits (49), Expect = 4.2
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Query: 81 KPFSC--GLCDKAFQRKVDLRRHR 102
+P+SC CDKAF R DL RH+
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHK 25
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 39.2 bits (92), Expect = 3e-06
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 53 KPHKCVV--CGKAFSQSSNLITHLRKHTGYK 81
+P C CGK F++S L H R HTG K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 38.1 bits (89), Expect = 1e-05
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 25 RPYPCQY--CGKRFHQKSDMKKHTYIHTGEK 53
RP+ C + CGKRF + ++++H HTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 27.3 bits (61), Expect = 0.097
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 1 CKQCGKTFKRSSTLSTHLLIHS 22
CGK F RS L H H+
Sbjct: 7 WSYCGKRFTRSDELQRHKRTHT 28
Score = 23.4 bits (51), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Query: 81 KPFSCGL--CDKAFQRKVDLRRHR 102
+PF C C K F R +L+RH+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHK 24
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 38.1 bits (89), Expect = 9e-06
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 53 KPHKC--VVCGKAFSQSSNLITHLRKHTG 79
KP +C CGK FS NL TH+R HTG
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29
Score = 34.3 bits (79), Expect = 2e-04
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 25 RPYPCQY--CGKRFHQKSDMKKHTYIHTGE 52
+P+ C + CGKRF +++ H IHTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 25.0 bits (55), Expect = 0.58
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 3 QCGKTFKRSSTLSTHLLIHS 22
CGK F L TH+ IH+
Sbjct: 9 GCGKRFSLDFNLRTHVRIHT 28
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 33.9 bits (78), Expect = 3e-04
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 53 KPHKCVV--CGKAFSQSSNLITHLRKHT 78
+P+ C C K F+QS+NL +H+ H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 28.9 bits (65), Expect = 0.024
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 25 RPYPCQY--CGKRFHQKSDMKKHTYIHT 50
RPY C + C K+F Q +++K H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 24.6 bits (54), Expect = 0.68
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 4 CGKTFKRSSTLSTHLLIHS 22
C K F +S+ L +H+L H+
Sbjct: 10 CNKKFAQSTNLKSHILTHA 28
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 33.4 bits (76), Expect = 6e-04
Identities = 7/40 (17%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 44 KHTYIHTGEKPHKCVVC--GKAFSQSSNLITHLRKHTGYK 81
+K +C+ K F + N+ +H++ H +
Sbjct: 8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 28.7 bits (64), Expect = 0.033
Identities = 5/39 (12%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 17 HLLIHSDTRPYPCQYC--GKRFHQKSDMKKHTYIHTGEK 53
+ + + C + K F ++ +++ H H ++
Sbjct: 9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 22.6 bits (48), Expect = 6.5
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 70 LITHLRKHTGYKPFSCGLCD--KAFQRKVDLRRHR 102
I K K F C K F+R+ ++R H
Sbjct: 6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHI 40
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 32.3 bits (73), Expect = 0.002
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 83 FSCGLCDKAFQRKVDLRRHRESQH 106
CGLC K F LR+H E+QH
Sbjct: 7 LPCGLCGKVFTDANRLRQH-EAQH 29
Score = 25.0 bits (54), Expect = 1.1
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 27 YPCQYCGKRFHQKSDMKKHTYIH 49
PC CGK F + +++H H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
Score = 23.4 bits (50), Expect = 3.2
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 57 CVVCGKAFSQSSNLITHLRKHTGYKPFSCGLCDKAFQR 94
C +CGK F+ ++ L H +H G G D R
Sbjct: 9 CGLCGKVFTDANRLRQHEAQH-GVTSLQLGYIDLPPPR 45
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 32.0 bits (72), Expect = 0.002
Identities = 17/26 (65%), Positives = 19/26 (73%)
Query: 54 PHKCVVCGKAFSQSSNLITHLRKHTG 79
PHKC VCGK FS+ L TH+R HTG
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 24.3 bits (52), Expect = 1.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 26 PYPCQYCGKRFHQKSDMKKHTYIHTG 51
P+ C+ CGK F +K +K H HTG
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 29.6 bits (66), Expect = 0.012
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 52 EKPHKCVVCGKAFSQSSNLITHLRKHTG 79
E+P KC +C A SS L HLR HTG
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTG 28
Score = 22.7 bits (48), Expect = 4.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 25 RPYPCQYCGKRFHQKSDMKKHTYIHTGE 52
RP+ CQ C S + H HTG+
Sbjct: 2 RPFKCQICPYASRNSSQLTVHLRSHTGD 29
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 29.2 bits (65), Expect = 0.017
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 25 RPYPCQYCGKRFHQKSDMKKHTYIHTGE 52
R + C CGK F + S +K+H +HTGE
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTGE 28
Score = 27.7 bits (61), Expect = 0.074
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 55 HKCVVCGKAFSQSSNLITHLRKHTG 79
H C CGKAF +SS L H HTG
Sbjct: 3 HVCAECGKAFVESSKLKRHQLVHTG 27
Score = 26.1 bits (57), Expect = 0.22
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 1 CKQCGKTFKRSSTLSTHLLIHS 22
C +CGK F SS L H L+H+
Sbjct: 5 CAECGKAFVESSKLKRHQLVHT 26
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 29.0 bits (65), Expect = 0.020
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 82 PFSCGLCDKAFQRKVDLRRHRESQHPGS 109
P+ CGLC++AF R+ L RH + H G+
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN 28
Score = 22.8 bits (49), Expect = 4.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 54 PHKCVVCGKAFSQSSNLITHLRK 76
P+ C +C +AF++ LI H +K
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQK 23
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 28.2 bits (63), Expect = 0.040
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 25 RPYPCQYCGKRFHQKSDMKKHTYIH 49
+P+ C CG++F + + K+HT IH
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIH 26
Score = 25.6 bits (56), Expect = 0.40
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 81 KPFSCGLCDKAFQRKVDLRRH 101
KPF+C +C + F R + +RH
Sbjct: 2 KPFACDICGRKFARSDERKRH 22
Score = 24.4 bits (53), Expect = 0.94
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 52 EKPHKCVVCGKAFSQSSNLITHLRKH 77
EKP C +CG+ F++S H + H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
Score = 21.7 bits (46), Expect = 9.8
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 1 CKQCGKTFKRSSTLSTHLLIH 21
C CG+ F RS H IH
Sbjct: 6 CDICGRKFARSDERKRHTKIH 26
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 28.1 bits (62), Expect = 0.048
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 53 KPHKCVVCGKAFSQSSNLITHLRKHTGYKPFS 84
K C +CGK F +L H H+G KP+S
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS 35
Score = 26.9 bits (59), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 1 CKQCGKTFKRSSTLSTHLLIHSDTRPY 27
C+ CGK F+ L+ H L HS +PY
Sbjct: 8 CEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 25.8 bits (56), Expect = 0.40
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 25 RPYPCQYCGKRFHQKSDMKKHTYIHTGEKPH 55
+ C+ CGK F + +H H+GEKP+
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain
{Desulfovibrio vulgaris [TaxId: 881]}
Length = 36
Score = 27.0 bits (60), Expect = 0.12
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 13/35 (37%)
Query: 27 YPCQYCGKRFHQKSDMKKHTYIHTGEKPHKCVVCG 61
+ C CG YIH GE KC +C
Sbjct: 6 HLCPICG-------------YIHKGEDFEKCPICF 27
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 37
Score = 27.0 bits (60), Expect = 0.15
Identities = 7/15 (46%), Positives = 7/15 (46%)
Query: 47 YIHTGEKPHKCVVCG 61
Y E P C VCG
Sbjct: 13 YTAVDEAPEYCPVCG 27
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 26.0 bits (57), Expect = 0.23
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 27 YPCQYCGKRFHQKSDMKKHTYIHTGEK 53
Y C+ CG R + S +KKH HT +
Sbjct: 2 YICEECGIRAKKPSMLKKHIRTHTDVR 28
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 26.2 bits (58), Expect = 0.45
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 51 GEKPHKCVVCGKAFSQSSNLITHLR--KH 77
G H+C+ C + F S+NL TH R H
Sbjct: 12 GGGLHRCLACARYFIDSTNLKTHFRSKDH 40
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 25.5 bits (55), Expect = 0.48
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 1 CKQCGKTFKRSSTLSTH 17
C +CGKTF R +T++ H
Sbjct: 7 CSKCGKTFTRRNTMARH 23
Score = 22.0 bits (46), Expect = 7.9
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 83 FSCGLCDKAFQRKVDLRRHRES 104
F C C K F R+ + RH ++
Sbjct: 5 FVCSKCGKTFTRRNTMARHADN 26
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 25.1 bits (54), Expect = 0.72
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 78 TGYKPFSCGLCDKAFQRKVDLRRHRESQHPGSPAQQHHISSTSM 121
TG KP+ C +C K F + RH S A + ++T
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRHVTSCTKSYEAAKAEQNTTEA 44
Score = 22.8 bits (48), Expect = 5.6
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 25 RPYPCQYCGKRFHQKSDMKKHT 46
+PY C C KRF + +H
Sbjct: 4 KPYECNICAKRFMWRDSFHRHV 25
>d2fiya1 e.59.1.1 (A:19-308) FdhE homolog PA4809 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 290
Score = 26.8 bits (59), Expect = 0.77
Identities = 12/38 (31%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 51 GEKPHKCVVCGKAFSQSSNLITHLRKHTGYKPFSCGLC 88
E C CG +I K TG + SC LC
Sbjct: 161 TESRTLCPACGSPPMAG--MIRQGGKETGLRYLSCSLC 196
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 24.6 bits (53), Expect = 0.83
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 52 EKPHKCVVCGKAFSQSSNLITHLRKHTG 79
EKP+ C VCG F + + H+R H G
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 24.2 bits (52), Expect = 1.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 25 RPYPCQYCGKRFHQKSDMKKHTYIHTG 51
+PY C CG RF +K M H H G
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 21.9 bits (46), Expect = 8.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 81 KPFSCGLCDKAFQRKVDLRRHRESQHPG 108
KP+SC +C F+RK + H S
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRSHDGS 29
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 24.3 bits (52), Expect = 1.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 53 KPHKCVVCGKAFSQSSNLITHLRKHT 78
KP+KC C A + SS+L HLR H+
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLRIHS 27
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 23.8 bits (51), Expect = 1.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 27 YPCQYCGKRFHQKSDMKKHTYI 48
YPC +C K F +K +M H I
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKI 23
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 23.9 bits (51), Expect = 1.5
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 83 FSCGLCDKAFQRKVDLRRHRESQ 105
F+C +C + F+R+++LR H S
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSH 27
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 23.9 bits (52), Expect = 1.8
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 53 KPHKCVVCGKAFSQSSNLITHLRKH 77
+ + C C + F + L H+ H
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVH 28
>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 23.3 bits (50), Expect = 2.6
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Query: 25 RPYPCQY--CGKRFHQKSDMKKH 45
+PY C++ C K F SD KH
Sbjct: 1 KPYMCEHEGCSKAFSNASDRAKH 23
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 23.1 bits (50), Expect = 2.8
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 57 CVVCGKAFSQSSNLITHLRKHTG 79
C + F L+ H+R+HTG
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTG 32
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 124
Score = 24.3 bits (52), Expect = 3.8
Identities = 9/60 (15%), Positives = 16/60 (26%), Gaps = 13/60 (21%)
Query: 1 CKQCGKTFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTYIHTGEKPHKCVVC 60
C CG+ + C+ C K K ++ + C +C
Sbjct: 51 CILCGEQLGML-----------GSASVVCEDCKKNVCTKCGVETS--NNRPHPVWLCKIC 97
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId:
7227]}
Length = 54
Score = 23.2 bits (49), Expect = 4.1
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 81 KPFSCGLCDKAFQRKVDLRRHRESQHPGSPA 111
+P +C +C ++ +LRRH E +H P
Sbjct: 23 QPATCPICYAVIRQSRNLRRHLELRHFAKPG 53
Score = 22.8 bits (48), Expect = 6.4
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 52 EKPHKCVVCGKAFSQSSNLITHLRKHTGYKP 82
E+P C +C QS NL HL KP
Sbjct: 22 EQPATCPICYAVIRQSRNLRRHLELRHFAKP 52
>d1hk8a_ c.7.1.3 (A:) Class III anaerobic ribonucleotide reductase
NRDD subunit {Bacteriophage T4 [TaxId: 10665]}
Length = 561
Score = 24.9 bits (54), Expect = 4.4
Identities = 10/53 (18%), Positives = 14/53 (26%), Gaps = 13/53 (24%)
Query: 28 PCQYCGKRFHQKSDMKKHTYIHTGEKPHKCVVCGKAFSQSSNLITHLRKHTGY 80
C CG H E C +CG + +R+ Y
Sbjct: 517 KCFTCGS---------THEMT-PTENGFVCSICG---ETDPKKMNTIRRTCAY 556
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 22.7 bits (48), Expect = 4.5
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 25 RPYPCQY--CGKRFHQKSDMKKHTYIHTGE 52
+P+PC+ C K F + +H+ HTGE
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 23.5 bits (50), Expect = 5.1
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 22 SDTRPYPCQYCGKRFHQKSDMKKHTYIHTGE 52
Y C++C + +++ H IH E
Sbjct: 14 LQNSTYQCKHCDSKLQSTAELTSHLNIHNEE 44
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 22.4 bits (47), Expect = 5.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 83 FSCGLCDKAFQRKVDLRRHR 102
+ CGLC+++F K L RH+
Sbjct: 1 YKCGLCERSFVEKSALSRHQ 20
>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK,
insert "zinc finger" domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 38
Score = 22.4 bits (48), Expect = 6.3
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 33 GKRFHQKSDMKKHTYIHTGEKPHKCVVCGKAFSQ 66
G+ H S H + ++ K V G+A Q
Sbjct: 1 GRLIHPASGRSYHKIFNPPKEDMKDDVTGEALVQ 34
>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 22.8 bits (49), Expect = 6.6
Identities = 9/33 (27%), Positives = 13/33 (39%), Gaps = 3/33 (9%)
Query: 1 CKQCGKTFKRSSTLSTHLLIHSDTRPYPCQYCG 33
C C TF + L + L T + C +C
Sbjct: 17 CPVCSSTF---TDLEANQLFDPMTGTFRCTFCH 46
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 28
Score = 21.9 bits (46), Expect = 8.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 54 PHKCVVCGKAFSQSSNLITH 73
P +C CGK + + NL+ H
Sbjct: 1 PFECPKCGKCYFRKENLLEH 20
Score = 21.5 bits (45), Expect = 9.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 26 PYPCQYCGKRFHQKSDMKKH 45
P+ C CGK + +K ++ +H
Sbjct: 1 PFECPKCGKCYFRKENLLEH 20
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.130 0.418
Gapped
Lambda K H
0.267 0.0636 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 482,224
Number of extensions: 20177
Number of successful extensions: 328
Number of sequences better than 10.0: 1
Number of HSP's gapped: 319
Number of HSP's successfully gapped: 217
Length of query: 134
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 58
Effective length of database: 1,364,116
Effective search space: 79118728
Effective search space used: 79118728
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (22.5 bits)