BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2644
(119 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P0L2|MARK1_HUMAN Serine/threonine-protein kinase MARK1 OS=Homo sapiens GN=MARK1 PE=1
SV=2
Length = 795
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 89/100 (89%), Positives = 93/100 (93%)
Query: 20 KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQW 79
KPRSLRFTWSMKTTSS DPN++M EIRKVLDANNCDYEQ+ERFLL CVHGD DSLVQW
Sbjct: 696 KPRSLRFTWSMKTTSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQW 755
Query: 80 EIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
E+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 756 EMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 795
>sp|O08678|MARK1_RAT Serine/threonine-protein kinase MARK1 OS=Rattus norvegicus GN=Mark1
PE=1 SV=1
Length = 793
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/102 (86%), Positives = 93/102 (91%)
Query: 18 QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLV 77
+ KPRSLRFTWSMKTTSS DPN+++ EIRKVLDAN CDYEQRERFLL CVHGD DSLV
Sbjct: 692 EAKPRSLRFTWSMKTTSSMDPNDMVREIRKVLDANTCDYEQRERFLLFCVHGDARQDSLV 751
Query: 78 QWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
QWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 752 QWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 793
>sp|P27448|MARK3_HUMAN MAP/microtubule affinity-regulating kinase 3 OS=Homo sapiens
GN=MARK3 PE=1 SV=4
Length = 753
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 87/102 (85%), Positives = 94/102 (92%)
Query: 18 QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLV 77
+ KPRSLRFTWSMKTTSS DP ++M EIRKVLDANNCDYEQRERFLL CVHGD + ++LV
Sbjct: 652 EAKPRSLRFTWSMKTTSSMDPGDMMREIRKVLDANNCDYEQRERFLLFCVHGDGHAENLV 711
Query: 78 QWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
QWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 712 QWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 753
>sp|Q03141|MARK3_MOUSE MAP/microtubule affinity-regulating kinase 3 OS=Mus musculus
GN=Mark3 PE=1 SV=2
Length = 753
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/113 (79%), Positives = 101/113 (89%), Gaps = 1/113 (0%)
Query: 8 NVVSNAVNDD-QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLC 66
NV S +++ + KPRSLRFTWSMKTTSS DP+++M EIRKVLDANNCDYEQRERFLL C
Sbjct: 641 NVSSEQKDENREAKPRSLRFTWSMKTTSSMDPSDMMREIRKVLDANNCDYEQRERFLLFC 700
Query: 67 VHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
VHGD + ++LVQWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 701 VHGDGHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 753
>sp|Q8VHJ5|MARK1_MOUSE Serine/threonine-protein kinase MARK1 OS=Mus musculus GN=Mark1 PE=1
SV=2
Length = 795
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 87/102 (85%), Positives = 93/102 (91%)
Query: 18 QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLV 77
+ KPRSLRFTWSMKTTSS DPN+++ EIRKVLDAN CDYEQ+ERFLL CVHGD DSLV
Sbjct: 694 EAKPRSLRFTWSMKTTSSMDPNDMLREIRKVLDANTCDYEQKERFLLFCVHGDARQDSLV 753
Query: 78 QWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
QWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 754 QWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 795
>sp|Q8VHF0|MARK3_RAT MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus
GN=Mark3 PE=2 SV=1
Length = 797
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/113 (79%), Positives = 100/113 (88%), Gaps = 1/113 (0%)
Query: 8 NVVSNAVNDD-QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLC 66
NV S +++ + KPRSLRFTWSMKTTSS DP+++M EIRKVLDAN CDYEQRERFLL C
Sbjct: 685 NVSSEQKDENREAKPRSLRFTWSMKTTSSMDPSDMMREIRKVLDANTCDYEQRERFLLFC 744
Query: 67 VHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
VHGD + +SLVQWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 745 VHGDGHAESLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 797
>sp|A8WYE4|PAR1_CAEBR Serine/threonine-protein kinase par-1 OS=Caenorhabditis briggsae
GN=par-1 PE=3 SV=1
Length = 1088
Score = 187 bits (476), Expect = 1e-47, Method: Composition-based stats.
Identities = 89/111 (80%), Positives = 97/111 (87%)
Query: 9 VVSNAVNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVH 68
V + VKPRSLRFTWSMKTTSS P+++M EIRKVLDAN CDYEQRER+++LCVH
Sbjct: 978 VAQAMTQEGDVKPRSLRFTWSMKTTSSLAPDDMMREIRKVLDANGCDYEQRERYMILCVH 1037
Query: 69 GDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
GDPNTDSLVQWE+EVCKLPRLSLNGVRFKRISGTSIGFKNIASKIA EL L
Sbjct: 1038 GDPNTDSLVQWEMEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIAQELNL 1088
>sp|Q9TW45|PAR1_CAEEL Serine/threonine-protein kinase par-1 OS=Caenorhabditis elegans
GN=par-1 PE=1 SV=1
Length = 1192
Score = 187 bits (476), Expect = 1e-47, Method: Composition-based stats.
Identities = 88/106 (83%), Positives = 98/106 (92%)
Query: 14 VNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNT 73
+++ VKPRSLRFTWSMKTTSS P+++M EIRKVLDAN CDYEQRER+++LCVHGDPNT
Sbjct: 1087 IHEGDVKPRSLRFTWSMKTTSSLAPDDMMREIRKVLDANGCDYEQRERYMILCVHGDPNT 1146
Query: 74 DSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
DSLVQWE+EVCKLPRLSLNGVRFKRISGTSIGFKNIASKIA EL L
Sbjct: 1147 DSLVQWEMEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIAQELNL 1192
>sp|Q05512|MARK2_MOUSE Serine/threonine-protein kinase MARK2 OS=Mus musculus GN=Mark2 PE=1
SV=3
Length = 776
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/118 (71%), Positives = 95/118 (80%), Gaps = 5/118 (4%)
Query: 7 HNVVSNAVNDD-----QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRER 61
H V S + D + KPRSLRFTWSMKTTSS +PNE+M EIRKVLDAN+C E ER
Sbjct: 659 HVVGSGGTDKDKEEFREAKPRSLRFTWSMKTTSSMEPNEMMREIRKVLDANSCQSELHER 718
Query: 62 FLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
++LLCVHG P ++ VQWE+EVCKLPRLSLNGVRFKRISGTS+ FKNIASKIANELKL
Sbjct: 719 YMLLCVHGTPGHENFVQWEMEVCKLPRLSLNGVRFKRISGTSMAFKNIASKIANELKL 776
>sp|O08679|MARK2_RAT Serine/threonine-protein kinase MARK2 OS=Rattus norvegicus GN=Mark2
PE=1 SV=1
Length = 722
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 80/102 (78%), Positives = 90/102 (88%)
Query: 18 QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLV 77
+ KPRSLRFTWSMKTTSS +PNE+M EIRKVLDAN+C E ER++LLCVHG P ++ V
Sbjct: 621 EAKPRSLRFTWSMKTTSSMEPNEMMREIRKVLDANSCQSELHERYMLLCVHGTPGHENFV 680
Query: 78 QWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
QWE+EVCKLPRLSLNGVRFKRISGTS+ FKNIASKIANELKL
Sbjct: 681 QWEMEVCKLPRLSLNGVRFKRISGTSMAFKNIASKIANELKL 722
>sp|Q7KZI7|MARK2_HUMAN Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1
SV=2
Length = 788
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 82/118 (69%), Positives = 95/118 (80%), Gaps = 6/118 (5%)
Query: 8 NVVSNAVNDDQ------VKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRER 61
+VV + ND + KPRSLRFTWSMKTTSS +PNE+M EIRKVLDAN+C E E+
Sbjct: 671 HVVGSGGNDKEKEEFREAKPRSLRFTWSMKTTSSMEPNEMMREIRKVLDANSCQSELHEK 730
Query: 62 FLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
++LLC+HG P + VQWE+EVCKLPRLSLNGVRFKRISGTS+ FKNIASKIANELKL
Sbjct: 731 YMLLCMHGTPGHEDFVQWEMEVCKLPRLSLNGVRFKRISGTSMAFKNIASKIANELKL 788
>sp|Q8CIP4|MARK4_MOUSE MAP/microtubule affinity-regulating kinase 4 OS=Mus musculus
GN=Mark4 PE=1 SV=1
Length = 752
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Query: 18 QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNT-DSL 76
+ PR LRF WS+K TSSR P +MA +R+ A C Q + FLL C+HG + L
Sbjct: 650 ETAPRLLRFPWSVKLTSSRPPEALMAALRQATAAARCRCRQPQPFLLACLHGGAGGPEPL 709
Query: 77 VQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
+E+EVC+LPR L GV F+R++GT++ F+ + ++I+N+L+L
Sbjct: 710 SHFEVEVCQLPRPGLRGVLFRRVAGTALAFRTLVTRISNDLEL 752
>sp|Q96L34|MARK4_HUMAN MAP/microtubule affinity-regulating kinase 4 OS=Homo sapiens
GN=MARK4 PE=1 SV=1
Length = 752
Score = 89.0 bits (219), Expect = 8e-18, Method: Composition-based stats.
Identities = 45/103 (43%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Query: 18 QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDP-NTDSL 76
+ PR LRF WS+K TSSR P +MA +R+ A C Q + FLL C+HG + L
Sbjct: 650 ETAPRLLRFPWSVKLTSSRPPEALMAALRQATAAARCRCRQPQPFLLACLHGGAGGPEPL 709
Query: 77 VQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
+E+EVC+LPR L GV F+R++GT++ F+ + ++I+N+L+L
Sbjct: 710 SHFEVEVCQLPRPGLRGVLFRRVAGTALAFRTLVTRISNDLEL 752
>sp|Q54DF2|MRKA_DICDI Probable serine/threonine-protein kinase MARK-A OS=Dictyostelium
discoideum GN=mrkA PE=3 SV=1
Length = 1060
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 66/100 (66%), Gaps = 6/100 (6%)
Query: 20 KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQW 79
+PR +RF + + TT+ +D E+M ++ KV+D + ++ FL+ C T+ V++
Sbjct: 964 EPRIVRFVFGVNTTTMKDAPELMQQVLKVVDTFCIPHTKKAPFLIEC-----ETEG-VRF 1017
Query: 80 EIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
IE+C+LPRLS+NG++FKRI G+S +K+I + +++KL
Sbjct: 1018 SIEICRLPRLSVNGLKFKRIGGSSWRYKSICKDLLSQMKL 1057
>sp|Q54TA3|MRKC_DICDI Probable serine/threonine-protein kinase MARK-C OS=Dictyostelium
discoideum GN=mrkC PE=3 SV=1
Length = 773
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 15 NDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTD 74
N PR+ + + TT+++ P + + E+++ L+ + +++ +L LC + D
Sbjct: 673 NQHMASPRTSKGIFKSSTTTTKSPEKTIIELKRSLEESGLFTKKKGPYLFLCF----DED 728
Query: 75 SLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
+ V+++IE+ K+ L L G++ KR+SG + +K+I +++ +KL
Sbjct: 729 NSVKFQIEIVKICNLDLTGIQLKRLSGDTWKYKDICTELVESMKL 773
>sp|Q28GW8|MELK_XENTR Maternal embryonic leucine zipper kinase OS=Xenopus tropicalis
GN=melk PE=2 SV=1
Length = 652
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 21 PRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWE 80
PR LR +++ TT+ +P +++ +I KVL + N DY Q+ + L C +Q+E
Sbjct: 555 PRKLRAHYNVTTTNIMNPEQLLNQIVKVLPSKNVDYVQK-GYTLKCKTQSDFGKVTMQFE 613
Query: 81 IEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
+EVC+L + + G+R +R+ G + +K + I + K+
Sbjct: 614 LEVCQLSKSEMVGIRRQRLKGDAWVYKRLVEDILSSCKV 652
>sp|Q91821|MELK_XENLA Maternal embryonic leucine zipper kinase OS=Xenopus laevis GN=melk
PE=1 SV=2
Length = 651
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 21 PRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWE 80
PR LR +++ TT+ +P +++ +I +VL + N DY Q+ + L C +Q+E
Sbjct: 554 PRKLRAHYNVTTTNIVNPEQLLNQIVRVLPSKNVDYVQK-GYTLKCKTQSDFGKVTMQFE 612
Query: 81 IEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
+EVC+L + + G+R +R+ G + +K + I + K+
Sbjct: 613 LEVCQLSKSEVVGIRRQRLKGDAWVYKRLVEDILSSCKV 651
>sp|Q61846|MELK_MOUSE Maternal embryonic leucine zipper kinase OS=Mus musculus GN=Melk
PE=1 SV=2
Length = 643
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 21 PRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWE 80
PR + +++ TT +P+++++EI +L N D+ Q+ + L C +Q+E
Sbjct: 546 PRKRKLHYNVTTTRLVNPDQLLSEIMAILPKKNVDFVQKG-YTLKCQTQSDFGKVTMQFE 604
Query: 81 IEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
+EVC+L R + G+R +R+ G + +K + I + K+
Sbjct: 605 LEVCQLQRPDVVGIRRQRLKGDAWVYKRLVEDILSGCKM 643
>sp|Q54MV2|MRKB_DICDI Probable serine/threonine-protein kinase MARK-B OS=Dictyostelium
discoideum GN=mrkB PE=3 SV=1
Length = 715
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 20 KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQW 79
K RS++ ++ TT+ +P +++ I + L++ Y +R ++ C P ++ + +
Sbjct: 618 KIRSMKGPFNSGTTTMLNPIQLIEHIEENLNSTQISY-RRNFYVFDCKTLCPRNET-INF 675
Query: 80 EIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
EIEVCK+ + + G++FKR+SG + + + KI LKL
Sbjct: 676 EIEVCKVNGMDMYGIKFKRLSGDAWSYSSSCIKIVESLKL 715
>sp|P22987|KIN1_SCHPO Protein kinase kin1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=kin1 PE=1 SV=3
Length = 891
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 77 VQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
+ +EI + K+P LSL GV F RISG S +K +AS+I NELKL
Sbjct: 849 LAFEIYIVKVPILSLRGVSFHRISGNSWQYKTLASRILNELKL 891
>sp|Q14680|MELK_HUMAN Maternal embryonic leucine zipper kinase OS=Homo sapiens GN=MELK
PE=1 SV=3
Length = 651
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 21 PRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWE 80
PR L+ +++ TT +P++++ EI +L + D+ Q+ + L C +Q+E
Sbjct: 554 PRRLKLHYNVTTTRLVNPDQLLNEIMSILPKKHVDFVQKG-YTLKCQTQSDFGKVTMQFE 612
Query: 81 IEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
+EVC+L + + G+R +R+ G + +K + I + K+
Sbjct: 613 LEVCQLQKPDVVGIRRQRLKGDAWVYKRLVEDILSSCKV 651
>sp|F1QGZ6|MELK_DANRE Maternal embryonic leucine zipper kinase OS=Danio rerio GN=melk
PE=2 SV=1
Length = 676
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 21 PRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWE 80
PR ++ +++ T+ + ++++ +I +L N D+ Q+ + L C +Q+E
Sbjct: 576 PRKIKAQYNVTLTNQTNADQVLNQILSILPEKNVDFVQKG-YTLKCHTQSDFGKVTMQFE 634
Query: 81 IEVCKLPRLSLNGVRFKRISGTSIGFKNIASKI 113
+EVC L + + G+R +R+ G + +K++ I
Sbjct: 635 LEVCLLQKPEVVGIRRQRLKGDAWVYKHLVEDI 667
>sp|P13185|KIN1_YEAST Serine/threonine protein kinase KIN1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KIN1 PE=1 SV=3
Length = 1064
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 77 VQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
+++EI + K+ + L GV FK+ISG + +K +AS I ELKL
Sbjct: 1022 IKFEIHIVKVRIVGLAGVHFKKISGNTWLYKELASSILKELKL 1064
>sp|P13186|KIN2_YEAST Serine/threonine-protein kinase KIN2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KIN2 PE=1 SV=3
Length = 1147
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 77 VQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
+++EI + K+ + L GV FK++SG + +K +AS I EL L
Sbjct: 1105 IKFEIHIVKVRIVGLAGVHFKKVSGNTWLYKELASYILKELNL 1147
>sp|C3LQT9|SECA_VIBCM Protein translocase subunit SecA OS=Vibrio cholerae serotype O1
(strain M66-2) GN=secA PE=3 SV=1
Length = 903
Score = 33.1 bits (74), Expect = 0.50, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 10 VSNAVNDDQVKPRSLRFTWSMKTTSSRDPN--EIMAEIRKVLDANNCDYEQ--RERFL 63
V NAV D+ + P+SL W +K R N ++ I+ LDA+N YE+ RER +
Sbjct: 683 VLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDFDLPLPIQSWLDADNKLYEEALRERII 740
>sp|Q9KPH4|SECA_VIBCH Protein translocase subunit SecA OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=secA PE=3
SV=1
Length = 903
Score = 33.1 bits (74), Expect = 0.50, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 10 VSNAVNDDQVKPRSLRFTWSMKTTSSRDPN--EIMAEIRKVLDANNCDYEQ--RERFL 63
V NAV D+ + P+SL W +K R N ++ I+ LDA+N YE+ RER +
Sbjct: 683 VLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDFDLPLPIQSWLDADNKLYEEALRERII 740
>sp|A5F5P1|SECA_VIBC3 Protein translocase subunit SecA OS=Vibrio cholerae serotype O1
(strain ATCC 39541 / Ogawa 395 / O395) GN=secA PE=3 SV=1
Length = 903
Score = 33.1 bits (74), Expect = 0.50, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 10 VSNAVNDDQVKPRSLRFTWSMKTTSSRDPN--EIMAEIRKVLDANNCDYEQ--RERFL 63
V NAV D+ + P+SL W +K R N ++ I+ LDA+N YE+ RER +
Sbjct: 683 VLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDFDLPLPIQSWLDADNKLYEEALRERII 740
>sp|O28173|RIBB_ARCFU 3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=ribB PE=3 SV=1
Length = 238
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 36 RDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNT 73
R +E + EIRKV DA++ Y+ R F L H D T
Sbjct: 77 RIASEKLPEIRKVADADDIKYDSRSSFSLWVNHRDTFT 114
>sp|O55768|VF184_IIV6 Putative helicase 184R OS=Invertebrate iridescent virus 6
GN=IIV6-184R PE=3 SV=1
Length = 971
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 4 VPKHNVVSNAVN--DDQVKPRSL-----RFTWSMKTTSSRDPNEIMAEIRKVLDANNCDY 56
+ + NV + +N D+Q+ P SL W M +S N+ +I K+LD N +
Sbjct: 173 IDQENVFQDFINSMDNQIMPSSLIDDISSKYWLMYGSSKEGLNKPY-KISKILDHNQQEI 231
Query: 57 EQRERFLL-LCVHGDPNTDSLVQWEI 81
+ F C+ G P TD+ V++E+
Sbjct: 232 SISKCFKSETCIDGSPITDTNVEFEL 257
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,495,975
Number of Sequences: 539616
Number of extensions: 1489120
Number of successful extensions: 3244
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3207
Number of HSP's gapped (non-prelim): 37
length of query: 119
length of database: 191,569,459
effective HSP length: 86
effective length of query: 33
effective length of database: 145,162,483
effective search space: 4790361939
effective search space used: 4790361939
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)