BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2648
(708 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 489 bits (1260), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/348 (69%), Positives = 270/348 (77%), Gaps = 43/348 (12%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
++PHIG Y+LLKTIGKGNFAKVKLA+H+ TG+EVAIKIIDKTQLNP SLQKLFREVRIMK
Sbjct: 7 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK 66
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
+L+HPNIVKLF+VIETEKTLYL+MEYASGGEVFDYLV HGRMKEKEAR+KFRQIVSAVQY
Sbjct: 67 ILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY 126
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
CHQK+I+HRDLKAENLLLD++MNIKIADFGFSNEFT G KLDTFCGSPPYAAPELFQGKK
Sbjct: 127 CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKK 186
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
YDGPEVDVWSLGVILYTLVSGSLPFDG L+ELRERVLRGKYRIPFYMSTDCENLLK+FL
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFL 246
Query: 281 VLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNS---SISPAPTNFKRQNTIDSASI 337
VLNP KR +LE + H + + P + Q ID
Sbjct: 247 VLNPIKRGTLE----------QIMKDRWINAGHEEDELKPFVEPE-LDISDQKRID---- 291
Query: 338 KENTARLNAGRPAKNTASIAPLDTKALVGLGYSRSEIEESLSQAKYDD 385
+VG+GYS+ EI+ESLS+ KYD+
Sbjct: 292 -------------------------IMVGMGYSQEEIQESLSKMKYDE 314
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 100/112 (89%), Positives = 109/112 (97%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KLF+VIETEKTLYL+MEYASGGEVFDYLV HGRMKEKEAR+KFRQIVSAVQYCHQK+I
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI 132
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLKAENLLLD++MNIKIADFGFSNEFT G KLDTFCGSPPYAAPELFQG
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQG 184
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 486 bits (1251), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/348 (68%), Positives = 269/348 (77%), Gaps = 43/348 (12%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
++PHIG Y+LLKTIGKGNFAKVKLA+H+ TG+EVAIKIIDKTQLNP SLQKLFREVRIMK
Sbjct: 10 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK 69
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
+L+HPNIVKLF+VIETEKTLYL+MEYASGGEVFDYLV HGRMKEKEAR+KFRQIVSAVQY
Sbjct: 70 ILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY 129
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
CHQK+I+HRDLKAENLLLD++MNIKIADFGFSNEFT G KLD FCG+PPYAAPELFQGKK
Sbjct: 130 CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKK 189
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
YDGPEVDVWSLGVILYTLVSGSLPFDG L+ELRERVLRGKYRIPFYMSTDCENLLK+FL
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFL 249
Query: 281 VLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNS---SISPAPTNFKRQNTIDSASI 337
VLNP KR +LE + H + + P + Q ID
Sbjct: 250 VLNPIKRGTLE----------QIMKDRWINAGHEEDELKPFVEPE-LDISDQKRID---- 294
Query: 338 KENTARLNAGRPAKNTASIAPLDTKALVGLGYSRSEIEESLSQAKYDD 385
+VG+GYS+ EI+ESLS+ KYD+
Sbjct: 295 -------------------------IMVGMGYSQEEIQESLSKMKYDE 317
Score = 218 bits (555), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 98/112 (87%), Positives = 108/112 (96%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KLF+VIETEKTLYL+MEYASGGEVFDYLV HGRMKEKEAR+KFRQIVSAVQYCHQK+I
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI 135
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLKAENLLLD++MNIKIADFGFSNEFT G KLD FCG+PPYAAPELFQG
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQG 187
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 484 bits (1246), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/348 (68%), Positives = 271/348 (77%), Gaps = 43/348 (12%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
++PHIG Y+LLKTIGKGNFAKVKLA+H+ TGKEVA+KIIDKTQLN SLQKLFREVRIMK
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 68
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
+L+HPNIVKLF+VIETEKTLYLVMEYASGGEVFDYLV HGRMKEKEARAKFRQIVSAVQY
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
CHQK I+HRDLKAENLLLD++MNIKIADFGFSNEFT GNKLDTFCGSPPYAAPELFQGKK
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
YDGPEVDVWSLGVILYTLVSGSLPFDG L+ELRERVLRGKYRIPFYMSTDCENLLKKFL
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 248
Query: 281 VLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNS---SISPAPTNFKRQNTIDSASI 337
+LNP+KR +LE + H + ++P P ++K
Sbjct: 249 ILNPSKRGTLE----------QIMKDRWMNVGHEDDELKPYVAPLP-DYK---------- 287
Query: 338 KENTARLNAGRPAKNTASIAPLDTKALVGLGYSRSEIEESLSQAKYDD 385
P T+ +V +GY+R EI++SL +Y++
Sbjct: 288 -------------------DPRRTELMVSMGYTREEIQDSLVGQRYNE 316
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/112 (91%), Positives = 109/112 (97%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KLF+VIETEKTLYLVMEYASGGEVFDYLV HGRMKEKEARAKFRQIVSAVQYCHQK I
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLKAENLLLD++MNIKIADFGFSNEFT GNKLDTFCGSPPYAAPELFQG
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQG 186
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 483 bits (1244), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/348 (68%), Positives = 270/348 (77%), Gaps = 43/348 (12%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
++PHIG Y+LLKTIGKGNFAKVKLA+H+ TGKEVA+KIIDKTQLN SLQKLFREVRIMK
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 68
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
+L+HPNIVKLF+VIETEKTLYLVMEYASGGEVFDYLV HGRMKEKEARAKFRQIVSAVQY
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
CHQK I+HRDLKAENLLLD++MNIKIADFGFSNEFT GNKLDTFCGSPPYAAPELFQGKK
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
YDGPEVDVWSLGVILYTLVSGSLPFDG L+ELRERVLRGKYRIPFYMSTDCENLLKKFL
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 248
Query: 281 VLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNS---SISPAPTNFKRQNTIDSASI 337
+LNP+KR +LE + H + + P P ++K
Sbjct: 249 ILNPSKRGTLE----------QIMKDRWMNVGHEDDELKPYVEPLP-DYK---------- 287
Query: 338 KENTARLNAGRPAKNTASIAPLDTKALVGLGYSRSEIEESLSQAKYDD 385
P T+ +V +GY+R EI++SL +Y++
Sbjct: 288 -------------------DPRRTELMVSMGYTREEIQDSLVGQRYNE 316
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/112 (91%), Positives = 109/112 (97%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KLF+VIETEKTLYLVMEYASGGEVFDYLV HGRMKEKEARAKFRQIVSAVQYCHQK I
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLKAENLLLD++MNIKIADFGFSNEFT GNKLDTFCGSPPYAAPELFQG
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQG 186
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 483 bits (1242), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/348 (68%), Positives = 270/348 (77%), Gaps = 43/348 (12%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
++PHIG Y+LLKTIGKGNFAKVKLA+H+ TGKEVA++IIDKTQLN SLQKLFREVRIMK
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK 68
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
+L+HPNIVKLF+VIETEKTLYLVMEYASGGEVFDYLV HGRMKEKEARAKFRQIVSAVQY
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
CHQK I+HRDLKAENLLLD++MNIKIADFGFSNEFT GNKLDTFCGSPPYAAPELFQGKK
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
YDGPEVDVWSLGVILYTLVSGSLPFDG L+ELRERVLRGKYRIPFYMSTDCENLLKKFL
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 248
Query: 281 VLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNS---SISPAPTNFKRQNTIDSASI 337
+LNP+KR +LE + H + + P P ++K
Sbjct: 249 ILNPSKRGTLE----------QIMKDRWMNVGHEDDELKPYVEPLP-DYK---------- 287
Query: 338 KENTARLNAGRPAKNTASIAPLDTKALVGLGYSRSEIEESLSQAKYDD 385
P T+ +V +GY+R EI++SL +Y++
Sbjct: 288 -------------------DPRRTELMVSMGYTREEIQDSLVGQRYNE 316
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/112 (91%), Positives = 109/112 (97%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KLF+VIETEKTLYLVMEYASGGEVFDYLV HGRMKEKEARAKFRQIVSAVQYCHQK I
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLKAENLLLD++MNIKIADFGFSNEFT GNKLDTFCGSPPYAAPELFQG
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQG 186
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 481 bits (1237), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/348 (68%), Positives = 269/348 (77%), Gaps = 43/348 (12%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
++PHIG Y+LLKTIGKGNFAKVKLA+H+ TGKEVA+KIIDKTQLN SLQKLFREVRIMK
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 68
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
+L+HPNIVKLF+VIETEKTLYLVMEYASGGEVFDYLV HGRMKEKEARAKFRQIVSAVQY
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
CHQK I+HRDLKAENLLLD++MNIKIADFGFSNEFT GNKLD FCG+PPYAAPELFQGKK
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
YDGPEVDVWSLGVILYTLVSGSLPFDG L+ELRERVLRGKYRIPFYMSTDCENLLKKFL
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 248
Query: 281 VLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNS---SISPAPTNFKRQNTIDSASI 337
+LNP+KR +LE + H + + P P ++K
Sbjct: 249 ILNPSKRGTLE----------QIMKDRWMNVGHEDDELKPYVEPLP-DYK---------- 287
Query: 338 KENTARLNAGRPAKNTASIAPLDTKALVGLGYSRSEIEESLSQAKYDD 385
P T+ +V +GY+R EI++SL +Y++
Sbjct: 288 -------------------DPRRTELMVSMGYTREEIQDSLVGQRYNE 316
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/112 (90%), Positives = 108/112 (96%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KLF+VIETEKTLYLVMEYASGGEVFDYLV HGRMKEKEARAKFRQIVSAVQYCHQK I
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLKAENLLLD++MNIKIADFGFSNEFT GNKLD FCG+PPYAAPELFQG
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQG 186
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 480 bits (1236), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/348 (68%), Positives = 269/348 (77%), Gaps = 43/348 (12%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
++PHIG Y+LLKTIGKGNFAKVKLA+H+ TGKEVA++IIDKTQLN SLQKLFREVRIMK
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK 68
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
+L+HPNIVKLF+VIETEKTLYLVMEYASGGEVFDYLV HGRMKEKEARAKFRQIVSAVQY
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
CHQK I+HRDLKAENLLLD++MNIKIADFGFSNEFT GNKLD FCGSPPYAAPELFQGKK
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKK 188
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
YDGPEVDVWSLGVILYTLVSGSLPFDG L+ELRERVLRGKYRIPFYMSTDCENLLKKFL
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 248
Query: 281 VLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNS---SISPAPTNFKRQNTIDSASI 337
+LNP+KR +LE + H + + P P ++K
Sbjct: 249 ILNPSKRGTLE----------QIMKDRWMNVGHEDDELKPYVEPLP-DYK---------- 287
Query: 338 KENTARLNAGRPAKNTASIAPLDTKALVGLGYSRSEIEESLSQAKYDD 385
P T+ +V +GY+R EI++SL +Y++
Sbjct: 288 -------------------DPRRTELMVSMGYTREEIQDSLVGQRYNE 316
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/112 (91%), Positives = 108/112 (96%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KLF+VIETEKTLYLVMEYASGGEVFDYLV HGRMKEKEARAKFRQIVSAVQYCHQK I
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLKAENLLLD++MNIKIADFGFSNEFT GNKLD FCGSPPYAAPELFQG
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQG 186
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 476 bits (1225), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/345 (68%), Positives = 266/345 (77%), Gaps = 43/345 (12%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD 103
HIG Y+LLKTIGKGNFAKVKLA+H+ TGKEVA+KIIDKTQLN SLQKLFREVRIMK+L+
Sbjct: 5 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLN 64
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HPNIVKLF+VIETEKTLYLVMEYASGGEVFDYLV HG MKEKEARAKFRQIVSAVQYCHQ
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
K I+HRDLKAENLLLD++MNIKIADFGFSNEFT GNKLDTFCGSPPYAAPELFQGKKYDG
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 184
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
PEVDVWSLGVILYTLVSGSLPFDG L+ELRERVLRGKYRIPFYMSTDCENLLKKFL+LN
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 244
Query: 284 PAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNS---SISPAPTNFKRQNTIDSASIKEN 340
P+KR +LE + H + + P P ++K
Sbjct: 245 PSKRGTLE----------QIMKDRWMNVGHEDDELKPYVEPLP-DYK------------- 280
Query: 341 TARLNAGRPAKNTASIAPLDTKALVGLGYSRSEIEESLSQAKYDD 385
P T+ +V +GY+R EI++SL +Y++
Sbjct: 281 ----------------DPRRTELMVSMGYTREEIQDSLVGQRYNE 309
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/112 (91%), Positives = 108/112 (96%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KLF+VIETEKTLYLVMEYASGGEVFDYLV HG MKEKEARAKFRQIVSAVQYCHQK I
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFI 127
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLKAENLLLD++MNIKIADFGFSNEFT GNKLDTFCGSPPYAAPELFQG
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQG 179
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 464 bits (1194), Expect = e-131, Method: Compositional matrix adjust.
Identities = 218/251 (86%), Positives = 235/251 (93%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
++PHIG Y+LLKTIGKGNFAKVKLA+H+ TGKEVA+KIIDKTQLN SLQKLFREVRI K
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXK 68
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
+L+HPNIVKLF+VIETEKTLYLV EYASGGEVFDYLV HGR KEKEARAKFRQIVSAVQY
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQY 128
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
CHQK I+HRDLKAENLLLD++ NIKIADFGFSNEFT GNKLD FCG+PPYAAPELFQGKK
Sbjct: 129 CHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
YDGPEVDVWSLGVILYTLVSGSLPFDG L+ELRERVLRGKYRIPFY STDCENLLKKFL
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFL 248
Query: 281 VLNPAKRASLE 291
+LNP+KR +LE
Sbjct: 249 ILNPSKRGTLE 259
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 98/112 (87%), Positives = 105/112 (93%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KLF+VIETEKTLYLV EYASGGEVFDYLV HGR KEKEARAKFRQIVSAVQYCHQK I
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLKAENLLLD++ NIKIADFGFSNEFT GNKLD FCG+PPYAAPELFQG
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQG 186
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 458 bits (1179), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/251 (90%), Positives = 238/251 (94%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
++PHIG Y+L KTIGKGNFAKVKLA+HV TG+EVA+KIIDKTQLNP SLQKLFREVRIMK
Sbjct: 10 EQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMK 69
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
+L+HPNIVKLF+VIETEKTLYLVMEYASGGEVFDYLV HGRMKEKEARAKFRQIVSAVQY
Sbjct: 70 ILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 129
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
CHQK I+HRDLKAENLLLD +MNIKIADFGFSNEFT GNKLDTFCGSPPYAAPELFQGKK
Sbjct: 130 CHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
YDGPEVDVWSLGVILYTLVSGSLPFDG L+ELRERVLRGKYRIPFYMSTDCENLLKK L
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKLL 249
Query: 281 VLNPAKRASLE 291
VLNP KR SLE
Sbjct: 250 VLNPIKRGSLE 260
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/112 (91%), Positives = 108/112 (96%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KLF+VIETEKTLYLVMEYASGGEVFDYLV HGRMKEKEARAKFRQIVSAVQYCHQK I
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYI 135
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLKAENLLLD +MNIKIADFGFSNEFT GNKLDTFCGSPPYAAPELFQG
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQG 187
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 180/252 (71%), Gaps = 2/252 (0%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIM 99
D HIG Y+++KT+G+G+F KVKLA H TG++VA+KII+K L +Q ++ RE+ +
Sbjct: 8 DGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL 67
Query: 100 KMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 159
++L HP+I+KL+ VI+++ + +V+EYA G E+FDY+V +M E+EAR F+QI+SAV+
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVE 126
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
YCH+ KI+HRDLK ENLLLD +N+KIADFG SN T GN L T CGSP YAAPE+ GK
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 186
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKF 279
Y GPEVDVWS GVILY ++ LPFD ++ L + + G Y +P ++S L+K+
Sbjct: 187 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM 246
Query: 280 LVLNPAKRASLE 291
L++NP R S+
Sbjct: 247 LIVNPLNRISIH 258
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL+ VI+++ + +V+EYA G E+FDY+V +M E+EAR F+QI+SAV+YCH+ KI
Sbjct: 75 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK ENLLLD +N+KIADFG SN T GN L T CGSP YAAPE+ G
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 185
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 268 bits (685), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 128/251 (50%), Positives = 180/251 (71%), Gaps = 2/251 (0%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIM 99
D HIG Y+++KT+G+G+F KVKLA H TG++VA+KII+K L +Q ++ RE+ +
Sbjct: 9 DGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL 68
Query: 100 KMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 159
++L HP+I+KL+ VI+++ + +V+EYA G E+FDY+V +M E+EAR F+QI+SAV+
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVE 127
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
YCH+ KI+HRDLK ENLLLD +N+KIADFG SN T GN L T CGSP YAAPE+ GK
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 187
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKF 279
Y GPEVDVWS GVILY ++ LPFD ++ L + + G Y +P ++S L+K+
Sbjct: 188 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM 247
Query: 280 LVLNPAKRASL 290
L++NP R S+
Sbjct: 248 LIVNPLNRISI 258
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL+ VI+++ + +V+EYA G E+FDY+V +M E+EAR F+QI+SAV+YCH+ KI
Sbjct: 76 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK ENLLLD +N+KIADFG SN T GN L T CGSP YAAPE+ G
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 186
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 180/252 (71%), Gaps = 2/252 (0%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIM 99
D HIG Y+++KT+G+G+F KVKLA H TG++VA+KII+K L +Q ++ RE+ +
Sbjct: 3 DGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL 62
Query: 100 KMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 159
++L HP+I+KL+ VI+++ + +V+EYA G E+FDY+V +M E+EAR F+QI+SAV+
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVE 121
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
YCH+ KI+HRDLK ENLLLD +N+KIADFG SN T GN L T CGSP YAAPE+ GK
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 181
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKF 279
Y GPEVDVWS GVILY ++ LPFD ++ L + + G Y +P ++S L+K+
Sbjct: 182 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM 241
Query: 280 LVLNPAKRASLE 291
L++NP R S+
Sbjct: 242 LIVNPLNRISIH 253
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL+ VI+++ + +V+EYA G E+FDY+V +M E+EAR F+QI+SAV+YCH+ KI
Sbjct: 70 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK ENLLLD +N+KIADFG SN T GN L T CGSP YAAPE+ G
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 180
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 127/248 (51%), Positives = 179/248 (72%), Gaps = 2/248 (0%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKML 102
HIG Y+++KT+G+G+F KVKLA H TG++VA+KII+K L +Q ++ RE+ +++L
Sbjct: 2 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 61
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
HP+I+KL+ VI+++ + +V+EYA G E+FDY+V +M E+EAR F+QI+SAV+YCH
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 120
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+ KI+HRDLK ENLLLD +N+KIADFG SN T GN L T CGSP YAAPE+ GK Y
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
GPEVDVWS GVILY ++ LPFD ++ L + + G Y +P ++S L+K+ L++
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 240
Query: 283 NPAKRASL 290
NP R S+
Sbjct: 241 NPLNRISI 248
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL+ VI+++ + +V+EYA G E+FDY+V +M E+EAR F+QI+SAV+YCH+ KI
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK ENLLLD +N+KIADFG SN T GN L T CGSP YAAPE+ G
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 176
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 172/248 (69%), Gaps = 1/248 (0%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP-GSLQKLFREVRIMKMLD 103
IG Y L T+G G F KVK+ +H TG +VA+KI+++ ++ + K+ RE++ +K+
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HP+I+KL+QVI T ++VMEY SGGE+FDY+ HGR++E EAR F+QI+SAV YCH+
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
++HRDLK EN+LLD+ MN KIADFG SN + G L T CGSP YAAPE+ G+ Y G
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 189
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
PEVD+WS GVILY L+ G+LPFD + L +++ G + IP Y++ LL L ++
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVD 249
Query: 284 PAKRASLE 291
P KRA+++
Sbjct: 250 PLKRATIK 257
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 84/112 (75%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL+QVI T ++VMEY SGGE+FDY+ HGR++E EAR F+QI+SAV YCH+ +
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK EN+LLD+ MN KIADFG SN + G L T CGSP YAAPE+ G
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG 184
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 171/248 (68%), Gaps = 1/248 (0%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP-GSLQKLFREVRIMKMLD 103
IG Y L T+G G F KVK+ +H TG +VA+KI+++ ++ + K+ RE++ +K+
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HP+I+KL+QVI T ++VMEY SGGE+FDY+ HGR++E EAR F+QI+SAV YCH+
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
++HRDLK EN+LLD+ MN KIADFG SN + G L CGSP YAAPE+ G+ Y G
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAG 189
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
PEVD+WS GVILY L+ G+LPFD + L +++ G + IP Y++ LL L ++
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVD 249
Query: 284 PAKRASLE 291
P KRA+++
Sbjct: 250 PLKRATIK 257
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 83/112 (74%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL+QVI T ++VMEY SGGE+FDY+ HGR++E EAR F+QI+SAV YCH+ +
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK EN+LLD+ MN KIADFG SN + G L CGSP YAAPE+ G
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISG 184
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 120/248 (48%), Positives = 172/248 (69%), Gaps = 1/248 (0%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP-GSLQKLFREVRIMKMLD 103
IG Y L T+G G F KVK+ KH TG +VA+KI+++ ++ + K+ RE++ +K+
Sbjct: 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HP+I+KL+QVI T +++VMEY SGGE+FDY+ +GR+ EKE+R F+QI+S V YCH+
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
++HRDLK EN+LLD+ MN KIADFG SN + G L CGSP YAAPE+ G+ Y G
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAG 194
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
PEVD+WS GVILY L+ G+LPFD + L +++ G + P Y++ +LLK L ++
Sbjct: 195 PEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVD 254
Query: 284 PAKRASLE 291
P KRA+++
Sbjct: 255 PMKRATIK 262
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 83/112 (74%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL+QVI T +++VMEY SGGE+FDY+ +GR+ EKE+R F+QI+S V YCH+ +
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMV 137
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK EN+LLD+ MN KIADFG SN + G L CGSP YAAPE+ G
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISG 189
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 119/249 (47%), Positives = 172/249 (69%), Gaps = 2/249 (0%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKML 102
HIG Y + +T+G+G+F KVKLA H T ++VA+K I + L + ++ RE+ +K+L
Sbjct: 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL 66
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
HP+I+KL+ VI T + +V+EYA GGE+FDY+V RM E E R F+QI+ A++YCH
Sbjct: 67 RHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH 125
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+ KI+HRDLK ENLLLD +N+KIADFG SN T GN L T CGSP YAAPE+ GK Y
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
GPEVDVWS G++LY ++ G LPFD + L ++V Y +P ++S ++L+++ +V
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVA 245
Query: 283 NPAKRASLE 291
+P +R +++
Sbjct: 246 DPMQRITIQ 254
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL+ VI T + +V+EYA GGE+FDY+V RM E E R F+QI+ A++YCH+ KI
Sbjct: 71 IIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK ENLLLD +N+KIADFG SN T GN L T CGSP YAAPE+ G
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVING 181
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 162/247 (65%), Gaps = 5/247 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y+L +TIG G FAKVKLA H+ TG+ VAIKI+DK L L ++ E+ +K L H +I
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHI 70
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
+L+ V+ET +++V+EY GGE+FDY++ R+ E+E R FRQIVSAV Y H +
Sbjct: 71 CQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYA 130
Query: 168 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGP 224
HRDLK ENLL D +K+ DFG + GNK L T CGS YAAPEL QGK Y G
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGS 189
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNP 284
E DVWS+G++LY L+ G LPFD + L ++++RGKY +P ++S LL++ L ++P
Sbjct: 190 EADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDP 249
Query: 285 AKRASLE 291
KR S++
Sbjct: 250 KKRISMK 256
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 79/129 (61%), Gaps = 4/129 (3%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
+ + +L+ V+ET +++V+EY GGE+FDY++ R+ E+E R FRQIVSAV Y H +
Sbjct: 68 QHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ 127
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAP 588
HRDLK ENLL D +K+ DFG + GNK L T CGS YAAPEL QG +
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGSLAYAAPELIQGKSY 186
Query: 589 VTSSGGAGT 597
+ S +
Sbjct: 187 LGSEADVWS 195
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 156/251 (62%), Gaps = 10/251 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGS-LQKLFREVRIMKMLDHP 105
+YK + +GKG+F +V L K TG+E A+K+I K Q+ + + L REV+++K LDHP
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
NI+KL++ E + YLV E +GGE+FD ++ R E +A RQ++S + Y H+ K
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 166 IIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
I+HRDLK ENLLL+S + NI+I DFG S F K+ G+ Y APE+ G YD
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYD 228
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY--RIPFY--MSTDCENLLKK 278
+ DVWS GVILY L+SG PF+G+ ++ ++V +GKY +P + +S ++L++K
Sbjct: 229 -EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 287
Query: 279 FLVLNPAKRAS 289
L P+ R S
Sbjct: 288 MLTYVPSMRIS 298
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL++ E + YLV E +GGE+FD ++ R E +A RQ++S + Y H+ KI
Sbjct: 111 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKI 170
Query: 534 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK ENLLL+S + NI+I DFG S F K+ G+ Y APE+ G
Sbjct: 171 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 225
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 156/251 (62%), Gaps = 10/251 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGS-LQKLFREVRIMKMLDHP 105
+YK + +GKG+F +V L K TG+E A+K+I K Q+ + + L REV+++K LDHP
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
NI+KL++ E + YLV E +GGE+FD ++ R E +A RQ++S + Y H+ K
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 166 IIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
I+HRDLK ENLLL+S + NI+I DFG S F K+ G+ Y APE+ G YD
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYD 229
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY--RIPFY--MSTDCENLLKK 278
+ DVWS GVILY L+SG PF+G+ ++ ++V +GKY +P + +S ++L++K
Sbjct: 230 -EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 288
Query: 279 FLVLNPAKRAS 289
L P+ R S
Sbjct: 289 MLTYVPSMRIS 299
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL++ E + YLV E +GGE+FD ++ R E +A RQ++S + Y H+ KI
Sbjct: 112 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKI 171
Query: 534 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK ENLLL+S + NI+I DFG S F K+ G+ Y APE+ G
Sbjct: 172 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 226
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 156/251 (62%), Gaps = 10/251 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGS-LQKLFREVRIMKMLDHP 105
+YK + +GKG+F +V L K TG+E A+K+I K Q+ + + L REV+++K LDHP
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
NI+KL++ E + YLV E +GGE+FD ++ R E +A RQ++S + Y H+ K
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 166 IIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
I+HRDLK ENLLL+S + NI+I DFG S F K+ G+ Y APE+ G YD
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYD 205
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY--RIPFY--MSTDCENLLKK 278
+ DVWS GVILY L+SG PF+G+ ++ ++V +GKY +P + +S ++L++K
Sbjct: 206 -EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 264
Query: 279 FLVLNPAKRAS 289
L P+ R S
Sbjct: 265 MLTYVPSMRIS 275
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL++ E + YLV E +GGE+FD ++ R E +A RQ++S + Y H+ KI
Sbjct: 88 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKI 147
Query: 534 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK ENLLL+S + NI+I DFG S F K+ G+ Y APE+ G
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 202
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 156/251 (62%), Gaps = 10/251 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGS-LQKLFREVRIMKMLDHP 105
+YK + +GKG+F +V L K TG+E A+K+I K Q+ + + L REV+++K LDHP
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
NI+KL++ E + YLV E +GGE+FD ++ R E +A RQ++S + Y H+ K
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 166 IIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
I+HRDLK ENLLL+S + NI+I DFG S F K+ G+ Y APE+ G YD
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYD 211
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY--RIPFY--MSTDCENLLKK 278
+ DVWS GVILY L+SG PF+G+ ++ ++V +GKY +P + +S ++L++K
Sbjct: 212 -EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 270
Query: 279 FLVLNPAKRAS 289
L P+ R S
Sbjct: 271 MLTYVPSMRIS 281
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL++ E + YLV E +GGE+FD ++ R E +A RQ++S + Y H+ KI
Sbjct: 94 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKI 153
Query: 534 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK ENLLL+S + NI+I DFG S F K+ G+ Y APE+ G
Sbjct: 154 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 208
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 154/251 (61%), Gaps = 10/251 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGS-LQKLFREVRIMKMLDHP 105
+YK + +GKG+F +V L K TG+E A+K+I K Q+ + + L REV+++K LDHP
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
NI KL++ E + YLV E +GGE+FD ++ R E +A RQ++S + Y H+ K
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 166 IIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
I+HRDLK ENLLL+S + NI+I DFG S F K G+ Y APE+ G YD
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHG-TYD 205
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY--RIPFY--MSTDCENLLKK 278
+ DVWS GVILY L+SG PF+G+ ++ ++V +GKY +P + +S ++L++K
Sbjct: 206 -EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 264
Query: 279 FLVLNPAKRAS 289
L P+ R S
Sbjct: 265 XLTYVPSXRIS 275
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+ KL++ E + YLV E +GGE+FD ++ R E +A RQ++S + Y H+ KI
Sbjct: 88 IXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKI 147
Query: 534 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK ENLLL+S + NI+I DFG S F K G+ Y APE+ G
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHG 202
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+L+K IG GNF +L + + + VA+K I++ + +++ RE+ + L HPN
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVK---REIINHRSLRHPN 76
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV+ +VI T L +VMEYASGGE+F+ + GR E EAR F+Q++S V YCH ++
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 167 IHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
HRDLK EN LLD +KI DFG+S ++ + G+P Y APE+ K+YDG
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 196
Query: 225 EVDVWSLGVILYTLVSGSLPFDG----STLRELRERVLRGKYRIPFY--MSTDCENLLKK 278
DVWS GV LY ++ G+ PF+ R+ R+L +Y IP Y +S +C +L+ +
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISR 256
Query: 279 FLVLNPAKRASL 290
V +PAKR S+
Sbjct: 257 IFVADPAKRISI 268
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++ +VI T L +VMEYASGGE+F+ + GR E EAR F+Q++S V YCH ++
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 534 IHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
HRDLK EN LLD +KI DFG+S ++ + G+P Y APE+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 154/256 (60%), Gaps = 16/256 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL----NPGSLQKLFREVRIMKML 102
+Y+ +K +G G + +V L K TG E AIKII K+ + N G+L EV ++K L
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGAL---LDEVAVLKQL 61
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
DHPNI+KL++ E ++ YLVME GGE+FD ++L + E +A +Q++S Y H
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 163 QKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
+ I+HRDLK ENLLL+S+ IKI DFG S F G K+ G+ Y APE+ + K
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-K 180
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFY--MSTDCENL 275
KYD + DVWS GVILY L+ G PF G T +E+ +RV +GK+ P + +S + + L
Sbjct: 181 KYD-EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQL 239
Query: 276 LKKFLVLNPAKRASLE 291
+K L P+KR S E
Sbjct: 240 VKLMLTYEPSKRISAE 255
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL++ E ++ YLVME GGE+FD ++L + E +A +Q++S Y H+ I
Sbjct: 66 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNI 125
Query: 534 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
+HRDLK ENLLL+S+ IKI DFG S F G K+ G+ Y APE+ +
Sbjct: 126 VHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR 179
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+L+K IG GNF +L + + + VA+K I++ + +++ RE+ + L HPN
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRHPN 75
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV+ +VI T L +VMEYASGGE+F+ + GR E EAR F+Q++S V YCH ++
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 135
Query: 167 IHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
HRDLK EN LLD +KI DFG+S ++ + G+P Y APE+ K+YDG
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 195
Query: 225 EVDVWSLGVILYTLVSGSLPFDG----STLRELRERVLRGKYRIPFY--MSTDCENLLKK 278
DVWS GV LY ++ G+ PF+ R+ R+L +Y IP Y +S +C +L+ +
Sbjct: 196 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISR 255
Query: 279 FLVLNPAKRASL 290
V +PAKR S+
Sbjct: 256 IFVADPAKRISI 267
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++ +VI T L +VMEYASGGE+F+ + GR E EAR F+Q++S V YCH ++
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 135
Query: 534 IHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
HRDLK EN LLD +KI DFG+S ++ + G+P Y APE+
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 187
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 154/256 (60%), Gaps = 16/256 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL----NPGSLQKLFREVRIMKML 102
+Y+ +K +G G + +V L K TG E AIKII K+ + N G+L EV ++K L
Sbjct: 22 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGAL---LDEVAVLKQL 78
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
DHPNI+KL++ E ++ YLVME GGE+FD ++L + E +A +Q++S Y H
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 163 QKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
+ I+HRDLK ENLLL+S+ IKI DFG S F G K+ G+ Y APE+ + K
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-K 197
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFY--MSTDCENL 275
KYD + DVWS GVILY L+ G PF G T +E+ +RV +GK+ P + +S + + L
Sbjct: 198 KYD-EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQL 256
Query: 276 LKKFLVLNPAKRASLE 291
+K L P+KR S E
Sbjct: 257 VKLMLTYEPSKRISAE 272
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL++ E ++ YLVME GGE+FD ++L + E +A +Q++S Y H+ I
Sbjct: 83 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNI 142
Query: 534 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
+HRDLK ENLLL+S+ IKI DFG S F G K+ G+ Y APE+ +
Sbjct: 143 VHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR 196
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 149/252 (59%), Gaps = 11/252 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+L+K IG GNF +L + + + VA+K I++ + +++ RE+ + L HPN
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRHPN 76
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV+ +VI T L +VMEYASGGE+F+ + GR E EAR F+Q++S V YCH ++
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 167 IHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
HRDLK EN LLD +KI FG+S ++ + G+P Y APE+ K+YDG
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 196
Query: 225 EVDVWSLGVILYTLVSGSLPFDG----STLRELRERVLRGKYRIPFY--MSTDCENLLKK 278
DVWS GV LY ++ G+ PF+ R+ R+L +Y IP Y +S +C +L+ +
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISR 256
Query: 279 FLVLNPAKRASL 290
V +PAKR S+
Sbjct: 257 IFVADPAKRISI 268
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++ +VI T L +VMEYASGGE+F+ + GR E EAR F+Q++S V YCH ++
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 534 IHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
HRDLK EN LLD +KI FG+S ++ + G+P Y APE+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 147/251 (58%), Gaps = 8/251 (3%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLD 103
I +K+ +GKG+FA V A+ + TG EVAIK+IDK + G +Q++ EV+I L
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQY 160
HP+I++L+ E +YLV+E GE+ YL R+K E EAR QI++ + Y
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL--KNRVKPFSENEARHFMHQIITGMLY 127
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGK 219
H I+HRDL NLLL MNIKIADFG + + P K T CG+P Y +PE+ +
Sbjct: 128 LHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEI-ATR 186
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKF 279
G E DVWSLG + YTL+ G PFD T++ +V+ Y +P ++S + ++L+ +
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQL 246
Query: 280 LVLNPAKRASL 290
L NPA R SL
Sbjct: 247 LRRNPADRLSL 257
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 65/114 (57%), Gaps = 6/114 (5%)
Query: 473 TLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCH 529
++L+L+ E +YLV+E GE+ YL R+K E EAR QI++ + Y H
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYL--KNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPEL 582
I+HRDL NLLL MNIKIADFG + + P K T CG+P Y +PE+
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEI 183
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 151/250 (60%), Gaps = 9/250 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y ++ +GKG+F +V K T +E A+K+I+K + REV ++K LDHPN
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I+KLF+++E + Y+V E +GGE+FD ++ R E +A +Q+ S + Y H+ I
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 167 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+HRDLK EN+LL+S + +IKI DFG S F K+ G+ Y APE+ +G YD
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYD- 200
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY--RIPFY--MSTDCENLLKKF 279
+ DVWS GVILY L+SG+ PF G ++ +RV GKY +P + +S D ++L++K
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKM 260
Query: 280 LVLNPAKRAS 289
L +P+ R +
Sbjct: 261 LTFHPSLRIT 270
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KLF+++E + Y+V E +GGE+FD ++ R E +A +Q+ S + Y H+ I
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 534 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK EN+LL+S + +IKI DFG S F K+ G+ Y APE+ +G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 149/252 (59%), Gaps = 11/252 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+L+K IG GNF +L + + VA+K I++ + +++ RE+ + L HPN
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK---REIINHRSLRHPN 76
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV+ +VI T L +VMEYASGGE+F+ + GR E EAR F+Q++S V Y H ++
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQV 136
Query: 167 IHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
HRDLK EN LLD +KIADFG+S ++ + G+P Y APE+ K+YDG
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGK 196
Query: 225 EVDVWSLGVILYTLVSGSLPFDG----STLRELRERVLRGKYRIPFY--MSTDCENLLKK 278
DVWS GV LY ++ G+ PF+ R+ R+L +Y IP Y +S +C +L+ +
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISR 256
Query: 279 FLVLNPAKRASL 290
V +PAKR S+
Sbjct: 257 IFVADPAKRISI 268
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++ +VI T L +VMEYASGGE+F+ + GR E EAR F+Q++S V Y H ++
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQV 136
Query: 534 IHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
HRDLK EN LLD +KIADFG+S ++ + G+P Y APE+
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVL 188
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 148/252 (58%), Gaps = 11/252 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+L+K IG GNF +L + + + VA+K I++ + +++ RE+ + L HPN
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRHPN 76
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV+ +VI T L +VMEYASGGE+F+ + GR E EAR F+Q++S V YCH ++
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 167 IHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
HRDLK EN LLD +KI FG+S ++ G+P Y APE+ K+YDG
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGK 196
Query: 225 EVDVWSLGVILYTLVSGSLPFDG----STLRELRERVLRGKYRIPFY--MSTDCENLLKK 278
DVWS GV LY ++ G+ PF+ R+ R+L +Y IP Y +S +C +L+ +
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISR 256
Query: 279 FLVLNPAKRASL 290
V +PAKR S+
Sbjct: 257 IFVADPAKRISI 268
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++ +VI T L +VMEYASGGE+F+ + GR E EAR F+Q++S V YCH ++
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 534 IHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
HRDLK EN LLD +KI FG+S ++ G+P Y APE+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVL 188
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 151/249 (60%), Gaps = 9/249 (3%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y+ +K +G G + +V L + T E AIKII KT ++ S KL EV ++K+LDHPNI
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
+KL+ E ++ YLVME GGE+FD ++ + E +A +Q++S V Y H+ I+
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIV 158
Query: 168 HRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
HRDLK ENLLL+S+ IKI DFG S F K+ G+ Y APE+ + KKYD
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYD-E 216
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFY--MSTDCENLLKKFL 280
+ DVWS+GVIL+ L++G PF G T +E+ +V +GKY P + +S ++L+K+ L
Sbjct: 217 KCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQML 276
Query: 281 VLNPAKRAS 289
+ +R S
Sbjct: 277 QFDSQRRIS 285
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL+ E ++ YLVME GGE+FD ++ + E +A +Q++S V Y H+ I
Sbjct: 98 IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNI 157
Query: 534 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
+HRDLK ENLLL+S+ IKI DFG S F K+ G+ Y APE+ +
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR 211
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 151/250 (60%), Gaps = 9/250 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y ++ +GKG+F +V K T +E A+K+I+K + REV ++K LDHPN
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I+KLF+++E + Y+V E +GGE+FD ++ R E +A +Q+ S + Y H+ I
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 167 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+HRDLK EN+LL+S + +IKI DFG S F K+ G+ Y APE+ +G YD
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYD- 200
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY--RIPFY--MSTDCENLLKKF 279
+ DVWS GVILY L+SG+ PF G ++ +RV GKY +P + +S D ++L++K
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKM 260
Query: 280 LVLNPAKRAS 289
L +P+ R +
Sbjct: 261 LTFHPSLRIT 270
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KLF+++E + Y+V E +GGE+FD ++ R E +A +Q+ S + Y H+ I
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 534 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK EN+LL+S + +IKI DFG S F K+ G+ Y APE+ +G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 151/250 (60%), Gaps = 9/250 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y ++ +GKG+F +V K T +E A+K+I+K + REV ++K LDHPN
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I+KLF+++E + Y+V E +GGE+FD ++ R E +A +Q+ S + Y H+ I
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 167 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+HRDLK EN+LL+S + +IKI DFG S F K+ G+ Y APE+ +G YD
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYD- 200
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY--RIPFY--MSTDCENLLKKF 279
+ DVWS GVILY L+SG+ PF G ++ +RV GKY +P + +S D ++L++K
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKM 260
Query: 280 LVLNPAKRAS 289
L +P+ R +
Sbjct: 261 LTFHPSLRIT 270
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KLF+++E + Y+V E +GGE+FD ++ R E +A +Q+ S + Y H+ I
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 534 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+HRDLK EN+LL+S + +IKI DFG S F K+ G+ Y APE+ +G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 147/252 (58%), Gaps = 11/252 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y +K IG GNF +L + T + VA+K I++ ++Q RE+ + L HPN
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ---REIINHRSLRHPN 77
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV+ +VI T L ++MEYASGGE+++ + GR E EAR F+Q++S V YCH +I
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI 137
Query: 167 IHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
HRDLK EN LLD +KI DFG+S ++ + G+P Y APE+ ++YDG
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGK 197
Query: 225 EVDVWSLGVILYTLVSGSLPF-DGSTLRELR---ERVLRGKYRIP--FYMSTDCENLLKK 278
DVWS GV LY ++ G+ PF D R+ R +R+L KY IP +S +C +L+ +
Sbjct: 198 IADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISR 257
Query: 279 FLVLNPAKRASL 290
V +PA R S+
Sbjct: 258 IFVADPATRISI 269
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++ +VI T L ++MEYASGGE+++ + GR E EAR F+Q++S V YCH +I
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI 137
Query: 534 IHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
HRDLK EN LLD +KI DFG+S ++ + G+P Y APE+
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 189
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 145/245 (59%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KTIG G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + IK+ADFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + IK+ADFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 149/261 (57%), Gaps = 17/261 (6%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKL----FREVRIMK 100
Y+ + +G+G + V+ H PT KE A+KIID T + +Q+L +EV I++
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 101 MLD-HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 159
+ HPNI++L ET +LV + GE+FDYL + EKE R R ++ +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
H+ I+HRDLK EN+LLD +MNIK+ DFGFS + PG KL + CG+P Y APE+ +
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECS 198
Query: 220 KYD-----GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFY--MST 270
D G EVD+WS GVI+YTL++GS PF + ++ G Y+ P + S
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 258
Query: 271 DCENLLKKFLVLNPAKRASLE 291
++L+ +FLV+ P KR + E
Sbjct: 259 TVKDLVSRFLVVQPQKRYTAE 279
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 71/119 (59%)
Query: 466 RASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 525
R SG +++L ET +LV + GE+FDYL + EKE R R ++ +
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
H+ I+HRDLK EN+LLD +MNIK+ DFGFS + PG KL + CG+P Y APE+ +
Sbjct: 138 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIE 196
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 145/245 (59%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KTIG G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GG++F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + IK+ADFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GG++F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + IK+ADFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 145/245 (59%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KTIG G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GG++F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + IK+ADFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GG++F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + IK+ADFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 145/245 (59%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEYA GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENL++D + IK+ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEYA GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENL++D + IK+ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 148/261 (56%), Gaps = 17/261 (6%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKL----FREVRIMK 100
Y+ + +G+G + V+ H PT KE A+KIID T + +Q+L +EV I++
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 101 MLD-HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 159
+ HPNI++L ET +LV + GE+FDYL + EKE R R ++ +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
H+ I+HRDLK EN+LLD +MNIK+ DFGFS + PG KL CG+P Y APE+ +
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECS 198
Query: 220 KYD-----GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFY--MST 270
D G EVD+WS GVI+YTL++GS PF + ++ G Y+ P + S
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 258
Query: 271 DCENLLKKFLVLNPAKRASLE 291
++L+ +FLV+ P KR + E
Sbjct: 259 TVKDLVSRFLVVQPQKRYTAE 279
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 70/119 (58%)
Query: 466 RASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 525
R SG +++L ET +LV + GE+FDYL + EKE R R ++ +
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
H+ I+HRDLK EN+LLD +MNIK+ DFGFS + PG KL CG+P Y APE+ +
Sbjct: 138 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIE 196
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 145/245 (59%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + T CG+P Y APE+ K Y+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWTLCGTPEYLAPEIILSKGYN 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 283 NPAKR 287
+ KR
Sbjct: 277 DLTKR 281
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + T CG+P Y APE+
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWTLCGTPEYLAPEI 210
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 145/245 (59%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEYA GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENL++D + IK+ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEYA GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENL++D + IK+ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 145/245 (59%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 25 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 84
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 85 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 144
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + T CG+P Y APE+ K Y+
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWTLCGTPEYLAPEIILSKGYN 202
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 203 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 261
Query: 283 NPAKR 287
+ KR
Sbjct: 262 DLTKR 266
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 148
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + T CG+P Y APE+
Sbjct: 149 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWTLCGTPEYLAPEI 195
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 145/245 (59%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEYA GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENL++D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEYA GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENL++D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 148/261 (56%), Gaps = 17/261 (6%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKL----FREVRIMK 100
Y+ + +G+G + V+ H PT KE A+KIID T + +Q+L +EV I++
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 101 MLD-HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 159
+ HPNI++L ET +LV + GE+FDYL + EKE R R ++ +
Sbjct: 66 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 125
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
H+ I+HRDLK EN+LLD +MNIK+ DFGFS + PG KL CG+P Y APE+ +
Sbjct: 126 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECS 185
Query: 220 KYD-----GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFY--MST 270
D G EVD+WS GVI+YTL++GS PF + ++ G Y+ P + S
Sbjct: 186 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 245
Query: 271 DCENLLKKFLVLNPAKRASLE 291
++L+ +FLV+ P KR + E
Sbjct: 246 TVKDLVSRFLVVQPQKRYTAE 266
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 70/119 (58%)
Query: 466 RASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 525
R SG +++L ET +LV + GE+FDYL + EKE R R ++ +
Sbjct: 65 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 124
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
H+ I+HRDLK EN+LLD +MNIK+ DFGFS + PG KL CG+P Y APE+ +
Sbjct: 125 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIE 183
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 145/245 (59%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 144/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH TG A+KI+DK ++ ++ E RI++ +
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEYA GGE+F +L GR E AR QIV +Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENL++D + IK+ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 283 NPAKR 287
+ KR
Sbjct: 277 DLTKR 281
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEYA GGE+F +L GR E AR QIV +Y H +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENL++D + IK+ DFGF+ + CG+P Y APE+
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 210
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 144/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P + KL + LY+VMEYA GGE+F +L GR E AR QIV +Y H
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENL++D + IK+ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 283 NPAKR 287
+ KR
Sbjct: 277 DLTKR 281
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
LY+VMEYA GGE+F +L GR E AR QIV +Y H +I+RDLK ENL++D
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 547 SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
+ IK+ DFGF+ + CG+P Y APE+
Sbjct: 177 QQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 210
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 144/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P + KL + LY+VMEYA GGE+F +L GR E AR QIV +Y H
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENL++D + IK+ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 283 NPAKR 287
+ KR
Sbjct: 277 DLTKR 281
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
LY+VMEYA GGE+F +L GR E AR QIV +Y H +I+RDLK ENL++D
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 547 SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
+ IK+ DFGF+ + CG+P Y APE+
Sbjct: 177 QQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 210
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 144/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P + KL + LY+VMEYA GGE+F +L GR E AR QIV +Y H
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENL++D + IK+ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 283 NPAKR 287
+ KR
Sbjct: 277 DLTKR 281
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
LY+VMEYA GGE+F +L GR E AR QIV +Y H +I+RDLK ENL++D
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 547 SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
+ IK+ DFGF+ + CG+P Y APE+
Sbjct: 177 QQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 210
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 144/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 144/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 144/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 144/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 283 NPAKR 287
+ KR
Sbjct: 277 DLTKR 281
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 210
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 144/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 144/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 283 NPAKR 287
+ KR
Sbjct: 277 DLTKR 281
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 163
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 210
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 144/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 144/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ ++T+G G+F +V L KH TG A+KI+DK ++ ++ E RI + +
Sbjct: 40 HLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAV 99
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+V+EYA GGE+F +L GR E AR QIV +Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + IK+ADFGF+ + CG+P Y APE+ K Y+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 283 NPAKR 287
+ KR
Sbjct: 277 DLTKR 281
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+V+EYA GGE+F +L GR E AR QIV +Y H +
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + IK+ADFGF+ + CG+P Y APE+
Sbjct: 164 IYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEI 210
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 143/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 143/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 144/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEYA GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENL++D + IK+ DFG + + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEYA GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENL++D + IK+ DFG + + CG+P Y APE+
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGLAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 145/251 (57%), Gaps = 9/251 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+L + +GKG F+ V+ +PTG+E A KII+ +L+ QKL RE RI ++L HPN
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV+L I E YLV + +GGE+F+ +V E +A +QI+ +V +CH I
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 167 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQGKKYD 222
+HRDLK ENLLL S+ +K+ADFG + E + F G+P Y +PE+ + Y
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKK 278
P VD+W+ GVILY L+ G PF L +++ G Y P ++ + ++L+ K
Sbjct: 185 KP-VDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 243
Query: 279 FLVLNPAKRAS 289
L +NPAKR +
Sbjct: 244 MLTINPAKRIT 254
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++L I E YLV + +GGE+F+ +V E +A +QI+ +V +CH I
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 534 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQG---G 586
+HRDLK ENLLL S+ +K+ADFG + E + F G+P Y +PE+ + G
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 587 APV 589
PV
Sbjct: 185 KPV 187
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 143/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 143/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH TG A+KI+DK ++ ++ E RI++ +
Sbjct: 60 HLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 119
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 237
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 238 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 296
Query: 283 NPAKR 287
+ KR
Sbjct: 297 DLTKR 301
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 183
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 143/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH TG A+KI+DK ++ ++ E RI++ +
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 283 NPAKR 287
+ KR
Sbjct: 277 DLTKR 281
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 210
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 143/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH TG A+KI+DK ++ ++ E RI++ +
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 283 NPAKR 287
+ KR
Sbjct: 277 DLTKR 281
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 210
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 144/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH+ TG A+KI+DK ++ ++ E RI++ +
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEYA GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENL++D + I++ DFG + + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEYA GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENL++D + I++ DFG + + CG+P Y APE+
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGLAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 145/251 (57%), Gaps = 9/251 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+L + +GKG F+ V+ +PTG+E A KII+ +L+ QKL RE RI ++L HPN
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV+L I E YLV + +GGE+F+ +V E +A +QI+ +V +CH I
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 167 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQGKKYD 222
+HRDLK ENLLL S+ +K+ADFG + E + F G+P Y +PE+ + Y
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKK 278
P VD+W+ GVILY L+ G PF L +++ G Y P ++ + ++L+ K
Sbjct: 185 KP-VDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 243
Query: 279 FLVLNPAKRAS 289
L +NPAKR +
Sbjct: 244 MLTINPAKRIT 254
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++L I E YLV + +GGE+F+ +V E +A +QI+ +V +CH I
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 534 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQG---G 586
+HRDLK ENLLL S+ +K+ADFG + E + F G+P Y +PE+ + G
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 587 APV 589
PV
Sbjct: 185 KPV 187
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 143/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH TG A+KI+DK ++ ++ E RI++ +
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 283 NPAKR 287
+ KR
Sbjct: 277 DLTKR 281
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 210
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 143/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH TG A+KI+DK ++ ++ E RI++ +
Sbjct: 32 HLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 91
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 151
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 209
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 210 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 268
Query: 283 NPAKR 287
+ KR
Sbjct: 269 DLTKR 273
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 155
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 156 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 202
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 143/245 (58%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
H+ +++ +KT+G G+F +V L KH TG A+KI+DK ++ ++ E RI++ +
Sbjct: 32 HLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 91
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY GGE+F +L GR E AR QIV +Y H
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 151
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 209
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 210 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 268
Query: 283 NPAKR 287
+ KR
Sbjct: 269 DLTKR 273
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY GGE+F +L GR E AR QIV +Y H +
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 155
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 156 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 202
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 142/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 60 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 119
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ T CG+P Y APE+ K Y+
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATW--TLCGTPEYLAPEIILSKGYN 237
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 238 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 296
Query: 283 NPAKR 287
+ KR
Sbjct: 297 DLTKR 301
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 183
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ T CG+P Y APE+
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATW--TLCGTPEYLAPEI 230
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/269 (37%), Positives = 155/269 (57%), Gaps = 21/269 (7%)
Query: 42 EPHIGK-YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSL----------- 89
E IG+ Y ++ +G G + +V L K E AIK+I K+Q + G
Sbjct: 31 EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFH 90
Query: 90 QKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARA 149
++++ E+ ++K LDHPNI+KLF V E +K YLV E+ GGE+F+ ++ + E +A
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 150 KFRQIVSAVQYCHQKKIIHRDLKAENLLLD---SEMNIKIADFGFSNEFTPGNKLDTFCG 206
+QI+S + Y H+ I+HRD+K EN+LL+ S +NIKI DFG S+ F+ KL G
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLG 210
Query: 207 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF 266
+ Y APE+ + KKY+ + DVWS GVI+Y L+ G PF G +++ ++V +GKY F
Sbjct: 211 TAYYIAPEVLK-KKYN-EKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDF 268
Query: 267 ----YMSTDCENLLKKFLVLNPAKRASLE 291
+S + + L+K L + KR + E
Sbjct: 269 NDWKNISDEAKELIKLMLTYDYNKRCTAE 297
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query: 473 TLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 532
++KLF V E +K YLV E+ GGE+F+ ++ + E +A +QI+S + Y H+
Sbjct: 107 NIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHN 166
Query: 533 IIHRDLKAENLLLD---SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
I+HRD+K EN+LL+ S +NIKI DFG S+ F+ KL G+ Y APE+ +
Sbjct: 167 IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK 221
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 145/244 (59%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA GEV+ L + E+ ++ +A+ YCH K++
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G+ +D +V
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHD-EKV 192
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 252
Query: 287 RASL 290
R L
Sbjct: 253 RPML 256
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA GEV+ L + E+ ++ +A+ YCH K++
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEG 185
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 163/310 (52%), Gaps = 17/310 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ +T+G G F++V LA+ TGK A+K I K L G + E+ +++ + H NI
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALK-GKESSIENEIAVLRKIKHENI 82
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
V L + E+ LYLVM+ SGGE+FD +V G EK+A RQ++ AV Y H+ I+
Sbjct: 83 VALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIV 142
Query: 168 HRDLKAENLLL---DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
HRDLK ENLL D E I I+DFG S G+ + T CG+P Y APE+ K Y
Sbjct: 143 HRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPY-SK 201
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFY--MSTDCENLLKKFL 280
VD WS+GVI Y L+ G PF +L E++L+ +Y P++ +S ++ ++ +
Sbjct: 202 AVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLM 261
Query: 281 VLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPTNF---KRQNTIDSASI 337
+P KR + E + P + A + H S + NF K + ++ ++
Sbjct: 262 EKDPNKRYTCEQAAR-----HPWIAGDTALNKNIHESVSAQIRKNFAKSKWRQAFNATAV 316
Query: 338 KENTARLNAG 347
+ +L+ G
Sbjct: 317 VRHMRKLHLG 326
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
E ++ L + E+ LYLVM+ SGGE+FD +V G EK+A RQ++ AV Y H+
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRM 139
Query: 532 KIIHRDLKAENLLL---DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
I+HRDLK ENLL D E I I+DFG S G+ + T CG+P Y APE+
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVL 194
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 144/259 (55%), Gaps = 9/259 (3%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK-TQLNPGSLQKLFREVRIMKML- 102
I ++ ++ +GKG+F KV LA+ TG A+K++ K L ++ E RI+ +
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+HP + +LF +T L+ VME+ +GG++ ++ R E AR +I+SA+ + H
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKY 221
K II+RDLK +N+LLD E + K+ADFG E G TFCG+P Y APE+ Q Y
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLY 201
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLV 281
GP VD W++GV+LY ++ G PF+ +L E +L + P ++ D +LK F+
Sbjct: 202 -GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMT 260
Query: 282 LNPAKRASLEVSGEVTLGG 300
NP R G +T GG
Sbjct: 261 KNPTMRL-----GSLTQGG 274
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L +LF +T L+ VME+ +GG++ ++ R E AR +I+SA+ + H K I
Sbjct: 86 LTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGI 145
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 584
I+RDLK +N+LLD E + K+ADFG E G TFCG+P Y APE+ Q
Sbjct: 146 IYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQ 197
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 145/251 (57%), Gaps = 9/251 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+L + IGKG F+ V+ + TG E A KII+ +L+ QKL RE RI ++L H N
Sbjct: 5 EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSN 64
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV+L I E YLV + +GGE+F+ +V E +A +QI+ AV +CHQ +
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 124
Query: 167 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQGKKYD 222
+HRDLK ENLLL S+ +K+ADFG + E + F G+P Y +PE+ + + Y
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYG 184
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKK 278
P VD+W+ GVILY L+ G PF +L +++ G Y P ++ + +NL+ +
Sbjct: 185 KP-VDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQ 243
Query: 279 FLVLNPAKRAS 289
L +NPAKR +
Sbjct: 244 MLTINPAKRIT 254
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++L I E YLV + +GGE+F+ +V E +A +QI+ AV +CHQ +
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 124
Query: 534 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQG---G 586
+HRDLK ENLLL S+ +K+ADFG + E + F G+P Y +PE+ + G
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYG 184
Query: 587 APV 589
PV
Sbjct: 185 KPV 187
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 145/244 (59%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ DT CG+ Y PE+ +G+ +D +V
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRDTLCGTLDYLPPEMIEGRMHD-EKV 188
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 248
Query: 287 RASL 290
R L
Sbjct: 249 RPML 252
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ DT CG+ Y PE+ +G
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRDTLCGTLDYLPPEMIEG 181
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 141/240 (58%), Gaps = 3/240 (1%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPNIVKL 110
+ +GKG F V LA+ + +A+K++ KTQL ++ +L REV I L HPNI++L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 170
+ +YL++EYA G V+ L R E+ ++ +A+ YCH K++IHRD
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 171 LKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 230
+K ENLLL S +KIADFG+S P ++ DT CG+ Y PE+ +G+ +D +VD+WS
Sbjct: 138 IKPENLLLGSNGELKIADFGWSVH-APSSRRDTLCGTLDYLPPEMIEGRMHD-EKVDLWS 195
Query: 231 LGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRASL 290
LGV+ Y + G PF+ T +E R+ R ++ P +++ +L+ + L N ++R +L
Sbjct: 196 LGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTL 255
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L R E+ ++ +A+ YCH K++
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ DT CG+ Y PE+ +G
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVH-APSSRRDTLCGTLDYLPPEMIEG 184
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 141/256 (55%), Gaps = 8/256 (3%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y + + +GKG F+ V+ H TG E A KII+ +L+ QKL RE RI + L HPNI
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 90
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
V+L I+ E YLV + +GGE+F+ +V E +A +QI+ ++ YCH I+
Sbjct: 91 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV 150
Query: 168 HRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
HR+LK ENLLL S+ +K+ADFG + E F G+P Y +PE+ + Y P
Sbjct: 151 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP 210
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKKFL 280
VD+W+ GVILY L+ G PF L ++ G Y P ++ + ++L+ L
Sbjct: 211 -VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 269
Query: 281 VLNPAKRASLEVSGEV 296
+NP KR + + + +V
Sbjct: 270 TVNPKKRITADQALKV 285
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++L I+ E YLV + +GGE+F+ +V E +A +QI+ ++ YCH I
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 149
Query: 534 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
+HR+LK ENLLL S+ +K+ADFG + E F G+P Y +PE+ +
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 203
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 158/304 (51%), Gaps = 28/304 (9%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y+L + +GKG F+ V+ V G+E A KII+ +L+ QKL RE RI ++L HPNI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
V+L I E YL+ + +GGE+F+ +V E +A +QI+ AV +CHQ ++
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVV 143
Query: 168 HRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQGKKYDG 223
HRDLK ENLLL S++ +K+ADFG + E + F G+P Y +PE+ + Y
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK 203
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKKF 279
P VD+W+ GVILY L+ G PF L +++ G Y P ++ + ++L+ K
Sbjct: 204 P-VDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKM 262
Query: 280 LVLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASIKE 339
L +NP+KR + H S S + RQ T+D +K+
Sbjct: 263 LTINPSKRI-----------------TAAEALKHPWISHRSTVASCMHRQETVD--CLKK 303
Query: 340 NTAR 343
AR
Sbjct: 304 FNAR 307
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++L I E YL+ + +GGE+F+ +V E +A +QI+ AV +CHQ +
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 142
Query: 534 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQG---G 586
+HRDLK ENLLL S++ +K+ADFG + E + F G+P Y +PE+ + G
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 202
Query: 587 APV 589
PV
Sbjct: 203 KPV 205
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 142/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 142/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 60 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 119
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 179
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 237
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 238 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 296
Query: 283 NPAKR 287
+ KR
Sbjct: 297 DLTKR 301
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 183
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 230
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 144/244 (59%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 155
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ D CG+ Y PE+ +G+ +D +V
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRDDLCGTLDYLPPEMIEGRMHDE-KV 213
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 273
Query: 287 RASL 290
R L
Sbjct: 274 RPML 277
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 155
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ D CG+ Y PE+ +G
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRDDLCGTLDYLPPEMIEG 206
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 142/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 142/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 144/244 (59%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 155
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G+ +D +V
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDE-KV 213
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 273
Query: 287 RASL 290
R L
Sbjct: 274 RPML 277
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 155
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEG 206
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 142/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 142/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 142/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 142/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 142/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 40 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 283 NPAKR 287
+ KR
Sbjct: 277 DLTKR 281
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 210
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 142/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 142/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 144/244 (59%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 146
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G+ +D +V
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHD-EKV 204
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 205 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 264
Query: 287 RASL 290
R L
Sbjct: 265 RPML 268
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 146
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEG 197
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 142/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 34 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 93
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 94 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 153
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 211
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 212 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 270
Query: 283 NPAKR 287
+ KR
Sbjct: 271 DLTKR 275
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 157
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 158 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 204
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 164/320 (51%), Gaps = 21/320 (6%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN--PGSLQKLFREVRIMKMLDHP 105
Y +G G F++V LA+ T K VAIK I K L GS++ E+ ++ + HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME---NEIAVLHKIKHP 76
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
NIV L + E+ LYL+M+ SGGE+FD +V G E++A Q++ AV+Y H
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 166 IIHRDLKAENLL---LDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
I+HRDLK ENLL LD + I I+DFG S PG+ L T CG+P Y APE+ K Y
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPY- 195
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFY--MSTDCENLLKK 278
VD WS+GVI Y L+ G PF +L E++L+ +Y P++ +S ++ ++
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRH 255
Query: 279 FLVLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPTNF---KRQNTIDSA 335
+ +P KR + E + + P + A + H S NF K + ++
Sbjct: 256 LMEKDPEKRFTCEQALQ-----HPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNAT 310
Query: 336 SIKENTARLNAGRPAKNTAS 355
++ + +L G T +
Sbjct: 311 AVVRHMRKLQLGHQPGGTGT 330
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L + E+ LYL+M+ SGGE+FD +V G E++A Q++ AV+Y H I
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 534 IHRDLKAENLL---LDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
+HRDLK ENLL LD + I I+DFG S PG+ L T CG+P Y APE+
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 142/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENL++D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIIISKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENL++D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLIIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 144/244 (59%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G+ +D +V
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHD-EKV 192
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 252
Query: 287 RASL 290
R L
Sbjct: 253 RPML 256
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEG 185
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 142/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 26 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 85
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 86 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 145
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 203
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 204 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 262
Query: 283 NPAKR 287
+ KR
Sbjct: 263 DLTKR 267
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 149
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 150 IYRDLKPENLLIDEQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 196
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 144/244 (59%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G+ +D +V
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHD-EKV 187
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 247
Query: 287 RASL 290
R L
Sbjct: 248 RPML 251
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEG 180
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 148/261 (56%), Gaps = 16/261 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT--QLNPGSLQKLF----REVRIMK 100
KY IG+G + V+ H TG E A+KI++ T +L+P L+++ RE I++
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 101 ML-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 159
+ HP+I+ L E+ ++LV + GE+FDYL + EKE R+ R ++ AV
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVS 214
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
+ H I+HRDLK EN+LLD M I+++DFGFS PG KL CG+P Y APE+ +
Sbjct: 215 FLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCS 274
Query: 220 KYD-----GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFY--MST 270
+ G EVD+W+ GVIL+TL++GS PF + ++ G+Y+ P + S+
Sbjct: 275 MDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSS 334
Query: 271 DCENLLKKFLVLNPAKRASLE 291
++L+ + L ++P R + E
Sbjct: 335 TVKDLISRLLQVDPEARLTAE 355
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 72/128 (56%)
Query: 466 RASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 525
R +G ++ L E+ ++LV + GE+FDYL + EKE R+ R ++ AV
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAV 213
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+ H I+HRDLK EN+LLD M I+++DFGFS PG KL CG+P Y APE+ +
Sbjct: 214 SFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKC 273
Query: 586 GAPVTSSG 593
T G
Sbjct: 274 SMDETHPG 281
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 144/244 (59%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G+ +D +V
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHD-EKV 190
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 250
Query: 287 RASL 290
R L
Sbjct: 251 RPML 254
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEG 183
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 137/249 (55%), Gaps = 8/249 (3%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y + + +GKG F+ V+ H TG E A KII+ +L+ QKL RE RI + L HPNI
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
V+L I+ E YLV + +GGE+F+ +V E +A +QI+ ++ YCH I+
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV 127
Query: 168 HRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
HR+LK ENLLL S+ +K+ADFG + E F G+P Y +PE+ + Y P
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP 187
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKKFL 280
VD+W+ GVILY L+ G PF L ++ G Y P ++ + ++L+ L
Sbjct: 188 -VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 246
Query: 281 VLNPAKRAS 289
+NP KR +
Sbjct: 247 TVNPKKRIT 255
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++L I+ E YLV + +GGE+F+ +V E +A +QI+ ++ YCH I
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 534 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
+HR+LK ENLLL S+ +K+ADFG + E F G+P Y +PE+ +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 180
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 144/244 (59%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ D CG+ Y PE+ +G+ +D +V
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRDDLCGTLDYLPPEMIEGRMHD-EKV 190
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 250
Query: 287 RASL 290
R L
Sbjct: 251 RPML 254
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ D CG+ Y PE+ +G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRDDLCGTLDYLPPEMIEG 183
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 137/249 (55%), Gaps = 8/249 (3%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y + + +GKG F+ V+ H TG E A KII+ +L+ QKL RE RI + L HPNI
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
V+L I+ E YLV + +GGE+F+ +V E +A +QI+ ++ YCH I+
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV 127
Query: 168 HRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
HR+LK ENLLL S+ +K+ADFG + E F G+P Y +PE+ + Y P
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP 187
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKKFL 280
VD+W+ GVILY L+ G PF L ++ G Y P ++ + ++L+ L
Sbjct: 188 -VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 246
Query: 281 VLNPAKRAS 289
+NP KR +
Sbjct: 247 TVNPKKRIT 255
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++L I+ E YLV + +GGE+F+ +V E +A +QI+ ++ YCH I
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 534 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
+HR+LK ENLLL S+ +K+ADFG + E F G+P Y +PE+ +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 180
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 141/256 (55%), Gaps = 8/256 (3%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y + + +GKG F+ V+ H TG E A KII+ +L+ QKL RE RI + L HPNI
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 66
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
V+L I+ E YLV + +GGE+F+ +V E +A +QI+ ++ YCH I+
Sbjct: 67 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV 126
Query: 168 HRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
HR+LK ENLLL S+ +K+ADFG + E F G+P Y +PE+ + Y P
Sbjct: 127 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP 186
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKKFL 280
VD+W+ GVILY L+ G PF L ++ G Y P ++ + ++L+ L
Sbjct: 187 -VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 245
Query: 281 VLNPAKRASLEVSGEV 296
+NP KR + + + +V
Sbjct: 246 TVNPKKRITADQALKV 261
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++L I+ E YLV + +GGE+F+ +V E +A +QI+ ++ YCH I
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 125
Query: 534 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
+HR+LK ENLLL S+ +K+ADFG + E F G+P Y +PE+ +
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 179
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE +G+ +D +V
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEXIEGRXHD-EKV 192
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 252
Query: 287 RASL 290
R L
Sbjct: 253 RPXL 256
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE +G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEXIEG 185
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 140/240 (58%), Gaps = 3/240 (1%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPNIVKL 110
+ +GKG F V LA+ + +A+K++ KTQL ++ +L REV I L HPNI++L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 170
+ +YL++EYA G V+ L R E+ ++ +A+ YCH K++IHRD
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 171 LKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 230
+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G+ +D +VD+WS
Sbjct: 138 IKPENLLLGSNGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHD-EKVDLWS 195
Query: 231 LGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRASL 290
LGV+ Y + G PF+ T +E R+ R ++ P +++ +L+ + L N ++R +L
Sbjct: 196 LGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTL 255
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L R E+ ++ +A+ YCH K++
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEG 184
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 161/324 (49%), Gaps = 32/324 (9%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+L + +GKG F+ V+ V G+E A II+ +L+ QKL RE RI ++L HPN
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPN 71
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV+L I E YL+ + +GGE+F+ +V E +A +QI+ AV +CHQ +
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 131
Query: 167 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQGKKYD 222
+HR+LK ENLLL S++ +K+ADFG + E + F G+P Y +PE+ + Y
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 191
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKK 278
P VD+W+ GVILY L+ G PF L +++ G Y P ++ + ++L+ K
Sbjct: 192 KP-VDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 250
Query: 279 FLVLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASIK 338
L +NP+KR + H S S + RQ T+D
Sbjct: 251 MLTINPSKRI-----------------TAAEALKHPWISHRSTVASCMHRQETVDCLK-- 291
Query: 339 ENTARLNAGRPAKNTASIAPLDTK 362
+ NA R K L T+
Sbjct: 292 ----KFNARRKLKGAILTVMLATR 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++L I E YL+ + +GGE+F+ +V E +A +QI+ AV +CHQ +
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 131
Query: 534 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQG---G 586
+HR+LK ENLLL S++ +K+ADFG + E + F G+P Y +PE+ + G
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 191
Query: 587 APV 589
PV
Sbjct: 192 KPV 194
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 142/248 (57%), Gaps = 3/248 (1%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLD 103
I + +++ +GKG F V LA+ +A+K++ K+QL G +L RE+ I L
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HPNI++++ K +YL++E+A GE++ L HGR E+ + ++ A+ YCH+
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+K+IHRD+K ENLL+ + +KIADFG+S P + CG+ Y PE+ +GK +D
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSVH-APSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
+VD+W GV+ Y + G PFD + E R++ + P ++S ++L+ K L +
Sbjct: 192 -KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 250
Query: 284 PAKRASLE 291
P +R L+
Sbjct: 251 PPQRLPLK 258
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+++ K +YL++E+A GE++ L HGR E+ + ++ A+ YCH++K+
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLL+ + +KIADFG+S P + CG+ Y PE+ +G
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVH-APSLRRRXMCGTLDYLPPEMIEG 186
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 144/244 (59%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 133
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G+ +D +V
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHD-EKV 191
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 192 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 251
Query: 287 RASL 290
R L
Sbjct: 252 RPML 255
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 133
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEG 184
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 141/244 (57%), Gaps = 4/244 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAK 286
+ K
Sbjct: 276 DLTK 279
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEI 209
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 141/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P Y AP + K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPAIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P Y AP +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPAI 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 144/244 (59%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 128
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G+ +D +V
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHD-EKV 186
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 187 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 246
Query: 287 RASL 290
R L
Sbjct: 247 RPML 250
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 128
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEG 179
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 153/290 (52%), Gaps = 18/290 (6%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN--PGSLQKLFREVRIMKMLDHP 105
Y +G G F++V LA+ T K VAIK I K L GS++ E+ ++ + HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME---NEIAVLHKIKHP 76
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
NIV L + E+ LYL+M+ SGGE+FD +V G E++A Q++ AV+Y H
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 166 IIHRDLKAENLL---LDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
I+HRDLK ENLL LD + I I+DFG S PG+ L T CG+P Y APE+ K Y
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPY- 195
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFY--MSTDCENLLKK 278
VD WS+GVI Y L+ G PF +L E++L+ +Y P++ +S ++ ++
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRH 255
Query: 279 FLVLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPTNFKR 328
+ +P KR + E + + P + A + H S NF +
Sbjct: 256 LMEKDPEKRFTCEQALQ-----HPWIAGDTALDKNIHQSVSEQIKKNFAK 300
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L + E+ LYL+M+ SGGE+FD +V G E++A Q++ AV+Y H I
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 534 IHRDLKAENLL---LDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
+HRDLK ENLL LD + I I+DFG S PG+ L T CG+P Y APE+
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 153/290 (52%), Gaps = 18/290 (6%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN--PGSLQKLFREVRIMKMLDHP 105
Y +G G F++V LA+ T K VAIK I K L GS++ E+ ++ + HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME---NEIAVLHKIKHP 76
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
NIV L + E+ LYL+M+ SGGE+FD +V G E++A Q++ AV+Y H
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 166 IIHRDLKAENLL---LDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
I+HRDLK ENLL LD + I I+DFG S PG+ L T CG+P Y APE+ K Y
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPY- 195
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFY--MSTDCENLLKK 278
VD WS+GVI Y L+ G PF +L E++L+ +Y P++ +S ++ ++
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRH 255
Query: 279 FLVLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPTNFKR 328
+ +P KR + E + + P + A + H S NF +
Sbjct: 256 LMEKDPEKRFTCEQALQ-----HPWIAGDTALDKNIHQSVSEQIKKNFAK 300
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L + E+ LYL+M+ SGGE+FD +V G E++A Q++ AV+Y H I
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 534 IHRDLKAENLL---LDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
+HRDLK ENLL LD + I I+DFG S PG+ L T CG+P Y APE+
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 144/244 (59%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G+ +D +V
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHD-EKV 190
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 250
Query: 287 RASL 290
R L
Sbjct: 251 RPML 254
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEG 183
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G+ +D +V
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRAALCGTLDYLPPEMIEGRMHD-EKV 190
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 250
Query: 287 RASL 290
R L
Sbjct: 251 RPML 254
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRAALCGTLDYLPPEMIEG 183
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 144/244 (59%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 131
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIA+FG+S P ++ T CG+ Y PE+ +G+ +D +V
Sbjct: 132 IHRDIKPENLLLGSAGELKIANFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHD-EKV 189
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 249
Query: 287 RASL 290
R L
Sbjct: 250 RPML 253
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 131
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIA+FG+S P ++ T CG+ Y PE+ +G
Sbjct: 132 IHRDIKPENLLLGSAGELKIANFGWSVH-APSSRRTTLCGTLDYLPPEMIEG 182
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 142/253 (56%), Gaps = 13/253 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN--PGSLQKLFREVRIMKMLDHP 105
Y +G G F++V LA+ T K VAIK I K L GS++ E+ ++ + HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME---NEIAVLHKIKHP 76
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
NIV L + E+ LYL+M+ SGGE+FD +V G E++A Q++ AV+Y H
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 166 IIHRDLKAENLL---LDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
I+HRDLK ENLL LD + I I+DFG S PG+ L T CG+P Y APE+ K Y
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPY- 195
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFY--MSTDCENLLKK 278
VD WS+GVI Y L+ G PF +L E++L+ +Y P++ +S ++ ++
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRH 255
Query: 279 FLVLNPAKRASLE 291
+ +P KR + E
Sbjct: 256 LMEKDPEKRFTCE 268
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L + E+ LYL+M+ SGGE+FD +V G E++A Q++ AV+Y H I
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 534 IHRDLKAENLL---LDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
+HRDLK ENLL LD + I I+DFG S PG+ L T CG+P Y APE+
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G+ +D +V
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTELCGTLDYLPPEMIEGRMHD-EKV 187
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 247
Query: 287 RASL 290
R L
Sbjct: 248 RPML 251
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTELCGTLDYLPPEMIEG 180
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 141/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + CG+P APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEALAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + CG+P APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLCGTPEALAPEI 209
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 141/248 (56%), Gaps = 3/248 (1%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLD 103
I + + + +GKG F V LA+ +A+K++ K+QL G +L RE+ I L
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HPNI++++ K +YL++E+A GE++ L HGR E+ + ++ A+ YCH+
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 133
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+K+IHRD+K ENLL+ + +KIADFG+S P + CG+ Y PE+ +GK +D
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFGWSVH-APSLRRRXMCGTLDYLPPEMIEGKTHDE 192
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
+VD+W GV+ Y + G PFD + E R++ + P ++S ++L+ K L +
Sbjct: 193 -KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 251
Query: 284 PAKRASLE 291
P +R L+
Sbjct: 252 PPQRLPLK 259
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+++ K +YL++E+A GE++ L HGR E+ + ++ A+ YCH++K+
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 136
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLL+ + +KIADFG+S P + CG+ Y PE+ +G
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFGWSVH-APSLRRRXMCGTLDYLPPEMIEG 187
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G+ +D +V
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEGRMHD-EKV 192
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 252
Query: 287 RASL 290
R L
Sbjct: 253 RPML 256
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEG 185
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ +A+K++ K QL ++ +L REV I L HPN
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 126
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G+ +D +V
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHD-EKV 184
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 185 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 244
Query: 287 RASL 290
R L
Sbjct: 245 RPML 248
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 126
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ T CG+ Y PE+ +G
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEG 177
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 131
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G+ +D +V
Sbjct: 132 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRXXLCGTLDYLPPEMIEGRMHD-EKV 189
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 249
Query: 287 RASL 290
R L
Sbjct: 250 RPML 253
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 131
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G
Sbjct: 132 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRXXLCGTLDYLPPEMIEG 182
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 141/248 (56%), Gaps = 3/248 (1%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLD 103
I + + + +GKG F V LA+ +A+K++ K+QL G +L RE+ I L
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HPNI++++ K +YL++E+A GE++ L HGR E+ + ++ A+ YCH+
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+K+IHRD+K ENLL+ + +KIADFG+S P + CG+ Y PE+ +GK +D
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSVH-APSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
+VD+W GV+ Y + G PFD + E R++ + P ++S ++L+ K L +
Sbjct: 192 -KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 250
Query: 284 PAKRASLE 291
P +R L+
Sbjct: 251 PPQRLPLK 258
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+++ K +YL++E+A GE++ L HGR E+ + ++ A+ YCH++K+
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLL+ + +KIADFG+S P + CG+ Y PE+ +G
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVH-APSLRRRXMCGTLDYLPPEMIEG 186
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 141/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + G+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLAGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + G+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLAGTPEYLAPEI 209
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G+ +D +V
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEGRMHD-EKV 188
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 248
Query: 287 RASL 290
R L
Sbjct: 249 RPML 252
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEG 181
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G+ +D +V
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEGRMHD-EKV 187
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 247
Query: 287 RASL 290
R L
Sbjct: 248 RPML 251
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEG 180
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 144/244 (59%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIA+FG+S P ++ T CG+ Y PE+ +G+ +D +V
Sbjct: 133 IHRDIKPENLLLGSAGELKIANFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHD-EKV 190
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 250
Query: 287 RASL 290
R L
Sbjct: 251 RPML 254
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIA+FG+S P ++ T CG+ Y PE+ +G
Sbjct: 133 IHRDIKPENLLLGSAGELKIANFGWSVH-APSSRRTTLCGTLDYLPPEMIEG 183
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G+ +D +V
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTXLCGTLDYLPPEMIEGRMHD-EKV 187
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 247
Query: 287 RASL 290
R L
Sbjct: 248 RPML 251
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTXLCGTLDYLPPEMIEG 180
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G+ +D +V
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRAALCGTLDYLPPEMIEGRMHD-EKV 187
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 247
Query: 287 RASL 290
R L
Sbjct: 248 RPML 251
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRAALCGTLDYLPPEMIEG 180
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G+ +D +V
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEGRMHD-EKV 187
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 247
Query: 287 RASL 290
R L
Sbjct: 248 RPML 251
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEG 180
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 168/305 (55%), Gaps = 15/305 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 59
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 275 LLKKFLVLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPTNFKR--QNTI 332
LL K LV NP+ R ++ + P+ GA + +S +P+ F + Q+ +
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPLKK--GAKRPRVTSGGVSESPSGFSKHIQSNL 297
Query: 333 DSASI 337
D + +
Sbjct: 298 DFSPV 302
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G+ +D +V
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRXXLCGTLDYLPPEMIEGRMHD-EKV 187
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 247
Query: 287 RASL 290
R L
Sbjct: 248 RPML 251
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRXXLCGTLDYLPPEMIEG 180
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 141/245 (57%), Gaps = 4/245 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
+ ++ +KT+G G+F +V L KH +G A+KI+DK ++ ++ E RI++ +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ P +VKL + LY+VMEY +GGE+F +L GR E AR QIV +Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+I+RDLK ENLL+D + I++ DFGF+ + G+P Y APE+ K Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLXGTPEYLAPEIILSKGYN 216
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
VD W+LGV++Y + +G PF ++ E+++ GK R P + S+D ++LL+ L +
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 283 NPAKR 287
+ KR
Sbjct: 276 DLTKR 280
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+KL + LY+VMEY +GGE+F +L GR E AR QIV +Y H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK ENLL+D + I++ DFGF+ + G+P Y APE+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWXLXGTPEYLAPEI 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 168/305 (55%), Gaps = 15/305 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 60
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 275 LLKKFLVLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPTNFKR--QNTI 332
LL K LV NP+ R ++ + P+ GA + +S +P+ F + Q+ +
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPLKK--GAKRPRVTSGGVSESPSGFSKHIQSNL 298
Query: 333 DSASI 337
D + +
Sbjct: 299 DFSPV 303
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G+ +D +V
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRXXLCGTLDYLPPEMIEGRMHD-EKV 190
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 250
Query: 287 RASL 290
R L
Sbjct: 251 RPML 254
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRXXLCGTLDYLPPEMIEG 183
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ T G+ Y PE+ +G+ +D +V
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSCH-APSSRRTTLSGTLDYLPPEMIEGRMHD-EKV 188
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 248
Query: 287 RASL 290
R L
Sbjct: 249 RPML 252
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ T G+ Y PE+ +G
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSCH-APSSRRTTLSGTLDYLPPEMIEG 181
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA GEV+ L + E+ ++ +A+ YCH K++
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ G+ Y PE+ +G+ +D +V
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRXXLXGTLDYLPPEMIEGRMHD-EKV 192
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+ + L NP++
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 252
Query: 287 RASL 290
R L
Sbjct: 253 RPML 256
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA GEV+ L + E+ ++ +A+ YCH K++
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ G+ Y PE+ +G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRXXLXGTLDYLPPEMIEG 185
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK-TQLNPGSLQKLFREVRIMKMLD 103
+ + LK +GKG F KV L + TG+ A+KI+ K + + E R+++
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HP + L +T L VMEYA+GGE+F +L E+ AR +IVSA++Y H
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 126
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+ +++RD+K ENL+LD + +IKI DFG E + G + TFCG+P Y APE+ + Y
Sbjct: 127 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY- 185
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
G VD W LGV++Y ++ G LPF L E +L + R P +S + ++LL L
Sbjct: 186 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 245
Query: 283 NPAKRASLEVSGEVTLGGAP 302
+P +R LGG P
Sbjct: 246 DPKQR----------LGGGP 255
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
+T L VMEYA+GGE+F +L E+ AR +IVSA++Y H + +++RD+K
Sbjct: 77 FQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKL 136
Query: 541 ENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 584
ENL+LD + +IKI DFG E + G + TFCG+P Y APE+ +
Sbjct: 137 ENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 181
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK-TQLNPGSLQKLFREVRIMKMLD 103
+ + LK +GKG F KV L + TG+ A+KI+ K + + E R+++
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HP + L +T L VMEYA+GGE+F +L E+ AR +IVSA++Y H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+ +++RD+K ENL+LD + +IKI DFG E + G + TFCG+P Y APE+ + Y
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY- 182
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
G VD W LGV++Y ++ G LPF L E +L + R P +S + ++LL L
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 242
Query: 283 NPAKRASLEVSGEVTLGGAP 302
+P +R LGG P
Sbjct: 243 DPKQR----------LGGGP 252
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
+T L VMEYA+GGE+F +L E+ AR +IVSA++Y H + +++RD+K
Sbjct: 74 FQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKL 133
Query: 541 ENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 584
ENL+LD + +IKI DFG E + G + TFCG+P Y APE+ +
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPN 106
+++ + +GKG F V LA+ + +A+K++ K QL ++ +L REV I L HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L+ +YL++EYA G V+ L + E+ ++ +A+ YCH KK+
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKV 129
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G+ +D +V
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRAALCGTLDYLPPEMIEGRMHD-EKV 187
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D+WSLGV+ Y + G PF+ +T ++ +R+ R ++ P +++ +L+ + L NP++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 247
Query: 287 RASL 290
R L
Sbjct: 248 RPML 251
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH KK+
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKV 129
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRAALCGTLDYLPPEMIEG 180
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK-TQLNPGSLQKLFREVRIMKMLD 103
+ + LK +GKG F KV L + TG+ A+KI+ K + + E R+++
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HP + L +T L VMEYA+GGE+F +L E+ AR +IVSA++Y H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+ +++RD+K ENL+LD + +IKI DFG E + G + TFCG+P Y APE+ + Y
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY- 182
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
G VD W LGV++Y ++ G LPF L E +L + R P +S + ++LL L
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 242
Query: 283 NPAKRASLEVSGEVTLGGAP 302
+P +R LGG P
Sbjct: 243 DPKQR----------LGGGP 252
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
+T L VMEYA+GGE+F +L E+ AR +IVSA++Y H + +++RD+K
Sbjct: 74 FQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKL 133
Query: 541 ENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 584
ENL+LD + +IKI DFG E + G + TFCG+P Y APE+ +
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 143/251 (56%), Gaps = 11/251 (4%)
Query: 48 YKLLKTIGKGNFAKVK-LAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
Y+L + +GKG F+ V+ K PT +E A KII+ +L+ QKL RE RI ++L HPN
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPT-QEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 91
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV+L I E YLV + +GGE+F+ +V E +A QI+ +V + HQ I
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDI 151
Query: 167 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQGKKYD 222
+HRDLK ENLLL S+ +K+ADFG + E + F G+P Y +PE+ + Y
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYG 211
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKK 278
P VD+W+ GVILY L+ G PF +L +++ G Y P ++ + +NL+ +
Sbjct: 212 KP-VDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQ 270
Query: 279 FLVLNPAKRAS 289
L +NPAKR +
Sbjct: 271 MLTINPAKRIT 281
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++L I E YLV + +GGE+F+ +V E +A QI+ +V + HQ I
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDI 151
Query: 534 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQG---G 586
+HRDLK ENLLL S+ +K+ADFG + E + F G+P Y +PE+ + G
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYG 211
Query: 587 APV 589
PV
Sbjct: 212 KPV 214
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 149/261 (57%), Gaps = 17/261 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK------LFREVRIMK 100
+Y + KT+G G +VKLA T K+VAIKII K + GS ++ + E+ I+K
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 76
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
L+HP I+K+ + E Y+V+E GGE+FD +V + R+KE + F Q++ AVQY
Sbjct: 77 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 135
Query: 161 CHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 217
H+ IIHRDLK EN+LL S+ IKI DFG S + + T CG+P Y APE+
Sbjct: 136 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 195
Query: 218 GKKYDG--PEVDVWSLGVILYTLVSGSLPF-DGSTLRELRERVLRGKYR-IPFYMSTDCE 273
G VD WSLGVIL+ +SG PF + T L++++ GKY IP + E
Sbjct: 196 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 255
Query: 274 ---NLLKKFLVLNPAKRASLE 291
+L+KK LV++P R + E
Sbjct: 256 KALDLVKKLLVVDPKARFTTE 276
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 83/152 (54%), Gaps = 16/152 (10%)
Query: 457 SASNAKPSRRASSGGETLLKLFQ--VIETE-----KTLYLVMEYASGGEVFDYLVLHGRM 509
SA A P+ + E L KL +I+ + + Y+V+E GGE+FD +V + R+
Sbjct: 58 SAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRL 117
Query: 510 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGN 566
KE + F Q++ AVQY H+ IIHRDLK EN+LL S+ IKI DFG S +
Sbjct: 118 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 177
Query: 567 KLDTFCGSPPYAAPELFQGGAPVTSSGGAGTN 598
+ T CG+P Y APE+ + S G AG N
Sbjct: 178 LMRTLCGTPTYLAPEV------LVSVGTAGYN 203
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 149/261 (57%), Gaps = 17/261 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK------LFREVRIMK 100
+Y + KT+G G +VKLA T K+VAIKII K + GS ++ + E+ I+K
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
L+HP I+K+ + E Y+V+E GGE+FD +V + R+KE + F Q++ AVQY
Sbjct: 71 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 161 CHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 217
H+ IIHRDLK EN+LL S+ IKI DFG S + + T CG+P Y APE+
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 218 GKKYDG--PEVDVWSLGVILYTLVSGSLPF-DGSTLRELRERVLRGKYR-IPFYMSTDCE 273
G VD WSLGVIL+ +SG PF + T L++++ GKY IP + E
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 274 ---NLLKKFLVLNPAKRASLE 291
+L+KK LV++P R + E
Sbjct: 250 KALDLVKKLLVVDPKARFTTE 270
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 83/152 (54%), Gaps = 16/152 (10%)
Query: 457 SASNAKPSRRASSGGETLLKLFQ--VIETE-----KTLYLVMEYASGGEVFDYLVLHGRM 509
SA A P+ + E L KL +I+ + + Y+V+E GGE+FD +V + R+
Sbjct: 52 SAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRL 111
Query: 510 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGN 566
KE + F Q++ AVQY H+ IIHRDLK EN+LL S+ IKI DFG S +
Sbjct: 112 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 171
Query: 567 KLDTFCGSPPYAAPELFQGGAPVTSSGGAGTN 598
+ T CG+P Y APE+ + S G AG N
Sbjct: 172 LMRTLCGTPTYLAPEV------LVSVGTAGYN 197
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 149/261 (57%), Gaps = 17/261 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK------LFREVRIMK 100
+Y + KT+G G +VKLA T K+VAIKII K + GS ++ + E+ I+K
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 69
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
L+HP I+K+ + E Y+V+E GGE+FD +V + R+KE + F Q++ AVQY
Sbjct: 70 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 161 CHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 217
H+ IIHRDLK EN+LL S+ IKI DFG S + + T CG+P Y APE+
Sbjct: 129 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 188
Query: 218 GKKYDG--PEVDVWSLGVILYTLVSGSLPF-DGSTLRELRERVLRGKYR-IPFYMSTDCE 273
G VD WSLGVIL+ +SG PF + T L++++ GKY IP + E
Sbjct: 189 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 248
Query: 274 ---NLLKKFLVLNPAKRASLE 291
+L+KK LV++P R + E
Sbjct: 249 KALDLVKKLLVVDPKARFTTE 269
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 83/152 (54%), Gaps = 16/152 (10%)
Query: 457 SASNAKPSRRASSGGETLLKLFQ--VIETE-----KTLYLVMEYASGGEVFDYLVLHGRM 509
SA A P+ + E L KL +I+ + + Y+V+E GGE+FD +V + R+
Sbjct: 51 SAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRL 110
Query: 510 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGN 566
KE + F Q++ AVQY H+ IIHRDLK EN+LL S+ IKI DFG S +
Sbjct: 111 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 170
Query: 567 KLDTFCGSPPYAAPELFQGGAPVTSSGGAGTN 598
+ T CG+P Y APE+ + S G AG N
Sbjct: 171 LMRTLCGTPTYLAPEV------LVSVGTAGYN 196
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 149/261 (57%), Gaps = 17/261 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK------LFREVRIMK 100
+Y + KT+G G +VKLA T K+VAIKII K + GS ++ + E+ I+K
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
L+HP I+K+ + E Y+V+E GGE+FD +V + R+KE + F Q++ AVQY
Sbjct: 71 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 161 CHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 217
H+ IIHRDLK EN+LL S+ IKI DFG S + + T CG+P Y APE+
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 218 GKKYDG--PEVDVWSLGVILYTLVSGSLPF-DGSTLRELRERVLRGKYR-IPFYMSTDCE 273
G VD WSLGVIL+ +SG PF + T L++++ GKY IP + E
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 274 ---NLLKKFLVLNPAKRASLE 291
+L+KK LV++P R + E
Sbjct: 250 KALDLVKKLLVVDPKARFTTE 270
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 83/152 (54%), Gaps = 16/152 (10%)
Query: 457 SASNAKPSRRASSGGETLLKLFQ--VIETE-----KTLYLVMEYASGGEVFDYLVLHGRM 509
SA A P+ + E L KL +I+ + + Y+V+E GGE+FD +V + R+
Sbjct: 52 SAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRL 111
Query: 510 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGN 566
KE + F Q++ AVQY H+ IIHRDLK EN+LL S+ IKI DFG S +
Sbjct: 112 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 171
Query: 567 KLDTFCGSPPYAAPELFQGGAPVTSSGGAGTN 598
+ T CG+P Y APE+ + S G AG N
Sbjct: 172 LMRTLCGTPTYLAPEV------LVSVGTAGYN 197
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 149/261 (57%), Gaps = 17/261 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK------LFREVRIMK 100
+Y + KT+G G +VKLA T K+VAIKII K + GS ++ + E+ I+K
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
L+HP I+K+ + E Y+V+E GGE+FD +V + R+KE + F Q++ AVQY
Sbjct: 71 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 161 CHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 217
H+ IIHRDLK EN+LL S+ IKI DFG S + + T CG+P Y APE+
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 218 GKKYDG--PEVDVWSLGVILYTLVSGSLPF-DGSTLRELRERVLRGKYR-IPFYMSTDCE 273
G VD WSLGVIL+ +SG PF + T L++++ GKY IP + E
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 274 ---NLLKKFLVLNPAKRASLE 291
+L+KK LV++P R + E
Sbjct: 250 KALDLVKKLLVVDPKARFTTE 270
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 83/152 (54%), Gaps = 16/152 (10%)
Query: 457 SASNAKPSRRASSGGETLLKLFQ--VIETE-----KTLYLVMEYASGGEVFDYLVLHGRM 509
SA A P+ + E L KL +I+ + + Y+V+E GGE+FD +V + R+
Sbjct: 52 SAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRL 111
Query: 510 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGN 566
KE + F Q++ AVQY H+ IIHRDLK EN+LL S+ IKI DFG S +
Sbjct: 112 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 171
Query: 567 KLDTFCGSPPYAAPELFQGGAPVTSSGGAGTN 598
+ T CG+P Y APE+ + S G AG N
Sbjct: 172 LMRTLCGTPTYLAPEV------LVSVGTAGYN 197
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 141/249 (56%), Gaps = 11/249 (4%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y L TIG+G++ +VK+A T A K I K + + + +E+ IMK LDHPNI
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDHPNI 68
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
++L++ E +YLVME +GGE+F+ +V +E +A + ++SAV YCH+ +
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVA 128
Query: 168 HRDLKAENLLL--DS-EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
HRDLK EN L DS + +K+ DFG + F PG + T G+P Y +P++ +G GP
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG--LYGP 186
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP----FYMSTDCENLLKKFL 280
E D WS GV++Y L+ G PF T E+ ++ G + P +S E+L+++ L
Sbjct: 187 ECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLL 246
Query: 281 VLNPAKRAS 289
+P +R +
Sbjct: 247 TKSPKQRIT 255
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++L++ E +YLVME +GGE+F+ +V +E +A + ++SAV YCH+ +
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 127
Query: 534 IHRDLKAENLLL--DS-EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG-GAPV 589
HRDLK EN L DS + +K+ DFG + F PG + T G+P Y +P++ +G P
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPE 187
Query: 590 TSSGGAGT 597
AG
Sbjct: 188 CDEWSAGV 195
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 141/249 (56%), Gaps = 11/249 (4%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y L TIG+G++ +VK+A T A K I K + + + +E+ IMK LDHPNI
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDHPNI 85
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
++L++ E +YLVME +GGE+F+ +V +E +A + ++SAV YCH+ +
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVA 145
Query: 168 HRDLKAENLLL--DS-EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
HRDLK EN L DS + +K+ DFG + F PG + T G+P Y +P++ +G GP
Sbjct: 146 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLY--GP 203
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP----FYMSTDCENLLKKFL 280
E D WS GV++Y L+ G PF T E+ ++ G + P +S E+L+++ L
Sbjct: 204 ECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLL 263
Query: 281 VLNPAKRAS 289
+P +R +
Sbjct: 264 TKSPKQRIT 272
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++L++ E +YLVME +GGE+F+ +V +E +A + ++SAV YCH+ +
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 144
Query: 534 IHRDLKAENLLL--DS-EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
HRDLK EN L DS + +K+ DFG + F PG + T G+P Y +P++ +G
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG 199
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 139/260 (53%), Gaps = 13/260 (5%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK-TQLNPGSLQKLFREVRIMKMLD 103
+ + LK +GKG F KV L + TG+ A+KI+ K + + E R+++
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HP + L +T L VMEYA+GGE+F +L E+ AR +IVSA++Y H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+ +++RD+K ENL+LD + +IKI DFG E + G + FCG+P Y APE+ + Y
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY- 182
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
G VD W LGV++Y ++ G LPF L E +L + R P +S + ++LL L
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 242
Query: 283 NPAKRASLEVSGEVTLGGAP 302
+P +R LGG P
Sbjct: 243 DPKQR----------LGGGP 252
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
+T L VMEYA+GGE+F +L E+ AR +IVSA++Y H + +++RD+K
Sbjct: 74 FQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKL 133
Query: 541 ENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 584
ENL+LD + +IKI DFG E + G + FCG+P Y APE+ +
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 149/256 (58%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINK 59
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 240 LLHKILVENPSARITI 255
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 149/256 (58%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 60
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 241 LLHKILVENPSARITI 256
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 149/256 (58%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 60
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 241 LLHKILVENPSARITI 256
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 149/256 (58%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 60
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 241 LLHKILVENPSARITI 256
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 139/260 (53%), Gaps = 13/260 (5%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK-TQLNPGSLQKLFREVRIMKMLD 103
+ + LK +GKG F KV L + TG+ A+KI+ K + + E R+++
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HP + L +T L VMEYA+GGE+F +L E+ AR +IVSA++Y H
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 128
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+ +++RD+K ENL+LD + +IKI DFG E + G + FCG+P Y APE+ + Y
Sbjct: 129 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY- 187
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
G VD W LGV++Y ++ G LPF L E +L + R P +S + ++LL L
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 247
Query: 283 NPAKRASLEVSGEVTLGGAP 302
+P +R LGG P
Sbjct: 248 DPKQR----------LGGGP 257
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
+T L VMEYA+GGE+F +L E+ AR +IVSA++Y H + +++RD+K
Sbjct: 79 FQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKL 138
Query: 541 ENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 584
ENL+LD + +IKI DFG E + G + FCG+P Y APE+ +
Sbjct: 139 ENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 183
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 139/260 (53%), Gaps = 13/260 (5%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK-TQLNPGSLQKLFREVRIMKMLD 103
+ + LK +GKG F KV L + TG+ A+KI+ K + + E R+++
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HP + L +T L VMEYA+GGE+F +L E+ AR +IVSA++Y H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+ +++RD+K ENL+LD + +IKI DFG E + G + FCG+P Y APE+ + Y
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY- 182
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
G VD W LGV++Y ++ G LPF L E +L + R P +S + ++LL L
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 242
Query: 283 NPAKRASLEVSGEVTLGGAP 302
+P +R LGG P
Sbjct: 243 DPKQR----------LGGGP 252
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
+T L VMEYA+GGE+F +L E+ AR +IVSA++Y H + +++RD+K
Sbjct: 74 FQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKL 133
Query: 541 ENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 584
ENL+LD + +IKI DFG E + G + FCG+P Y APE+ +
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 139/260 (53%), Gaps = 13/260 (5%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK-TQLNPGSLQKLFREVRIMKMLD 103
+ + LK +GKG F KV L + TG+ A+KI+ K + + E R+++
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HP + L +T L VMEYA+GGE+F +L E+ AR +IVSA++Y H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+ +++RD+K ENL+LD + +IKI DFG E + G + FCG+P Y APE+ + Y
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY- 182
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL 282
G VD W LGV++Y ++ G LPF L E +L + R P +S + ++LL L
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 242
Query: 283 NPAKRASLEVSGEVTLGGAP 302
+P +R LGG P
Sbjct: 243 DPKQR----------LGGGP 252
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
+T L VMEYA+GGE+F +L E+ AR +IVSA++Y H + +++RD+K
Sbjct: 74 FQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKL 133
Query: 541 ENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 584
ENL+LD + +IKI DFG E + G + FCG+P Y APE+ +
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 149/256 (58%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 59
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 240 LLHKILVENPSARITI 255
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 149/256 (58%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 2 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 58
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 59 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 238
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 239 LLHKILVENPSARITI 254
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 79 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 138
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 139 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 149/261 (57%), Gaps = 17/261 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK------LFREVRIMK 100
+Y + KT+G G +VKLA T K+VAI+II K + GS ++ + E+ I+K
Sbjct: 150 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 209
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
L+HP I+K+ + E Y+V+E GGE+FD +V + R+KE + F Q++ AVQY
Sbjct: 210 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 268
Query: 161 CHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 217
H+ IIHRDLK EN+LL S+ IKI DFG S + + T CG+P Y APE+
Sbjct: 269 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 328
Query: 218 GKKYDGPE--VDVWSLGVILYTLVSGSLPF-DGSTLRELRERVLRGKYR-IPFYMSTDCE 273
G VD WSLGVIL+ +SG PF + T L++++ GKY IP + E
Sbjct: 329 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 388
Query: 274 ---NLLKKFLVLNPAKRASLE 291
+L+KK LV++P R + E
Sbjct: 389 KALDLVKKLLVVDPKARFTTE 409
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 83/152 (54%), Gaps = 16/152 (10%)
Query: 457 SASNAKPSRRASSGGETLLKLFQ--VIETE-----KTLYLVMEYASGGEVFDYLVLHGRM 509
SA A P+ + E L KL +I+ + + Y+V+E GGE+FD +V + R+
Sbjct: 191 SAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRL 250
Query: 510 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGN 566
KE + F Q++ AVQY H+ IIHRDLK EN+LL S+ IKI DFG S +
Sbjct: 251 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 310
Query: 567 KLDTFCGSPPYAAPELFQGGAPVTSSGGAGTN 598
+ T CG+P Y APE+ + S G AG N
Sbjct: 311 LMRTLCGTPTYLAPEV------LVSVGTAGYN 336
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 149/256 (58%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 59
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 240 LLHKILVENPSARITI 255
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 149/256 (58%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 59
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 240 LLHKILVENPSARITI 255
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 149/256 (58%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 60
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 241 LLHKILVENPSARITI 256
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 149/256 (58%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 60
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 241 LLHKILVENPSARITI 256
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 149/256 (58%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 59
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 240 LLHKILVENPSARITI 255
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 149/261 (57%), Gaps = 17/261 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK------LFREVRIMK 100
+Y + KT+G G +VKLA T K+VAI+II K + GS ++ + E+ I+K
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 195
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
L+HP I+K+ + E Y+V+E GGE+FD +V + R+KE + F Q++ AVQY
Sbjct: 196 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 254
Query: 161 CHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 217
H+ IIHRDLK EN+LL S+ IKI DFG S + + T CG+P Y APE+
Sbjct: 255 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 314
Query: 218 GKKYDGPE--VDVWSLGVILYTLVSGSLPF-DGSTLRELRERVLRGKYR-IPFYMSTDCE 273
G VD WSLGVIL+ +SG PF + T L++++ GKY IP + E
Sbjct: 315 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 374
Query: 274 ---NLLKKFLVLNPAKRASLE 291
+L+KK LV++P R + E
Sbjct: 375 KALDLVKKLLVVDPKARFTTE 395
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 83/152 (54%), Gaps = 16/152 (10%)
Query: 457 SASNAKPSRRASSGGETLLKLFQ--VIETE-----KTLYLVMEYASGGEVFDYLVLHGRM 509
SA A P+ + E L KL +I+ + + Y+V+E GGE+FD +V + R+
Sbjct: 177 SAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRL 236
Query: 510 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGN 566
KE + F Q++ AVQY H+ IIHRDLK EN+LL S+ IKI DFG S +
Sbjct: 237 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 296
Query: 567 KLDTFCGSPPYAAPELFQGGAPVTSSGGAGTN 598
+ T CG+P Y APE+ + S G AG N
Sbjct: 297 LMRTLCGTPTYLAPEV------LVSVGTAGYN 322
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 149/256 (58%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 59
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 240 LLHKILVENPSARITI 255
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 145/245 (59%), Gaps = 15/245 (6%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFR-EVRIMKMLDHPNIVKLFQ 112
+G+G + V K T K A+K++ KT +K+ R E+ ++ L HPNI+KL +
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKT-----VDKKIVRTEIGVLLRLSHPNIIKLKE 115
Query: 113 VIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLK 172
+ ET + LV+E +GGE+FD +V G E++A +QI+ AV Y H+ I+HRDLK
Sbjct: 116 IFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLK 175
Query: 173 AENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 229
ENLL + + +KIADFG S + T CG+P Y APE+ +G Y GPEVD+W
Sbjct: 176 PENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAY-GPEVDMW 234
Query: 230 SLGVILYTLVSGSLPF-DGSTLRELRERVLRGKYRI--PFY--MSTDCENLLKKFLVLNP 284
S+G+I Y L+ G PF D + + R+L +Y P++ +S + ++L++K +VL+P
Sbjct: 235 SVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDP 294
Query: 285 AKRAS 289
KR +
Sbjct: 295 KKRLT 299
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL ++ ET + LV+E +GGE+FD +V G E++A +QI+ AV Y H+ I
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGI 169
Query: 534 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGA 587
+HRDLK ENLL + + +KIADFG S + T CG+P Y APE+ +G A
Sbjct: 170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCA 226
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 136/246 (55%), Gaps = 4/246 (1%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLD 103
+ +++ LK +GKG F KV L K TG+ A+KI+ K + + E R+++
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH- 162
HP + L +T L VMEYA+GGE+F +L E AR +IVSA+ Y H
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 266
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKY 221
+K +++RDLK ENL+LD + +IKI DFG E G + TFCG+P Y APE+ + Y
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 326
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLV 281
G VD W LGV++Y ++ G LPF +L E +L + R P + + ++LL L
Sbjct: 327 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 385
Query: 282 LNPAKR 287
+P +R
Sbjct: 386 KDPKQR 391
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH-QKKIIHRDLK 539
+T L VMEYA+GGE+F +L E AR +IVSA+ Y H +K +++RDLK
Sbjct: 217 FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLK 276
Query: 540 AENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 584
ENL+LD + +IKI DFG E G + TFCG+P Y APE+ +
Sbjct: 277 LENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 322
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 136/246 (55%), Gaps = 4/246 (1%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLD 103
+ +++ LK +GKG F KV L K TG+ A+KI+ K + + E R+++
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH- 162
HP + L +T L VMEYA+GGE+F +L E AR +IVSA+ Y H
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 269
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKY 221
+K +++RDLK ENL+LD + +IKI DFG E G + TFCG+P Y APE+ + Y
Sbjct: 270 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 329
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLV 281
G VD W LGV++Y ++ G LPF +L E +L + R P + + ++LL L
Sbjct: 330 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 388
Query: 282 LNPAKR 287
+P +R
Sbjct: 389 KDPKQR 394
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH-QKKIIHRDLK 539
+T L VMEYA+GGE+F +L E AR +IVSA+ Y H +K +++RDLK
Sbjct: 220 FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLK 279
Query: 540 AENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 584
ENL+LD + +IKI DFG E G + TFCG+P Y APE+ +
Sbjct: 280 LENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 325
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 165/332 (49%), Gaps = 28/332 (8%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLD 103
+ +++ LK +GKG F KV L K TG+ A+KI+ K + + E R+++
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH- 162
HP + L +T L VMEYA+GGE+F +L E AR +IVSA+ Y H
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 128
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKY 221
+K +++RDLK ENL+LD + +IKI DFG E G + FCG+P Y APE+ + Y
Sbjct: 129 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 188
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLV 281
G VD W LGV++Y ++ G LPF +L E +L + R P + + ++LL L
Sbjct: 189 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 247
Query: 282 LNPAKRASLEVSGEVTLGGAPVTSS--------GGAGTNHTHNSSISPAPTNFKRQNTID 333
+P +R LGG + G H + +SP FK Q T +
Sbjct: 248 KDPKQR----------LGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP---FKPQVTSE 294
Query: 334 SAS---IKENTARLNAGRPAKNTASIAPLDTK 362
+ + +E TA++ P S+ +D++
Sbjct: 295 TDTRYFDEEFTAQMITITPPDQDDSMECVDSE 326
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH-QKKIIHRDLK 539
+T L VMEYA+GGE+F +L E AR +IVSA+ Y H +K +++RDLK
Sbjct: 79 FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLK 138
Query: 540 AENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 584
ENL+LD + +IKI DFG E G + FCG+P Y APE+ +
Sbjct: 139 LENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 184
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 165/332 (49%), Gaps = 28/332 (8%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLD 103
+ +++ LK +GKG F KV L K TG+ A+KI+ K + + E R+++
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH- 162
HP + L +T L VMEYA+GGE+F +L E AR +IVSA+ Y H
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 127
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKY 221
+K +++RDLK ENL+LD + +IKI DFG E G + FCG+P Y APE+ + Y
Sbjct: 128 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLV 281
G VD W LGV++Y ++ G LPF +L E +L + R P + + ++LL L
Sbjct: 188 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 246
Query: 282 LNPAKRASLEVSGEVTLGGAPVTSS--------GGAGTNHTHNSSISPAPTNFKRQNTID 333
+P +R LGG + G H + +SP FK Q T +
Sbjct: 247 KDPKQR----------LGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP---FKPQVTSE 293
Query: 334 SAS---IKENTARLNAGRPAKNTASIAPLDTK 362
+ + +E TA++ P S+ +D++
Sbjct: 294 TDTRYFDEEFTAQMITITPPDQDDSMECVDSE 325
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH-QKKIIHRDLK 539
+T L VMEYA+GGE+F +L E AR +IVSA+ Y H +K +++RDLK
Sbjct: 78 FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLK 137
Query: 540 AENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 584
ENL+LD + +IKI DFG E G + FCG+P Y APE+ +
Sbjct: 138 LENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 183
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 148/256 (57%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 3 PFVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 59
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 240 LLHKILVENPSARITI 255
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 165/332 (49%), Gaps = 28/332 (8%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLD 103
+ +++ LK +GKG F KV L K TG+ A+KI+ K + + E R+++
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH- 162
HP + L +T L VMEYA+GGE+F +L E AR +IVSA+ Y H
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 126
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKY 221
+K +++RDLK ENL+LD + +IKI DFG E G + FCG+P Y APE+ + Y
Sbjct: 127 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 186
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLV 281
G VD W LGV++Y ++ G LPF +L E +L + R P + + ++LL L
Sbjct: 187 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 245
Query: 282 LNPAKRASLEVSGEVTLGGAPVTSS--------GGAGTNHTHNSSISPAPTNFKRQNTID 333
+P +R LGG + G H + +SP FK Q T +
Sbjct: 246 KDPKQR----------LGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP---FKPQVTSE 292
Query: 334 SAS---IKENTARLNAGRPAKNTASIAPLDTK 362
+ + +E TA++ P S+ +D++
Sbjct: 293 TDTRYFDEEFTAQMITITPPDQDDSMECVDSE 324
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH-QKKIIHRDLK 539
+T L VMEYA+GGE+F +L E AR +IVSA+ Y H +K +++RDLK
Sbjct: 77 FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLK 136
Query: 540 AENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 584
ENL+LD + +IKI DFG E G + FCG+P Y APE+ +
Sbjct: 137 LENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 182
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 148/256 (57%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINA 60
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 241 LLHKILVENPSARITI 256
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 156
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAC 215
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 216 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLD 275
Query: 284 PAKRASLE 291
KR E
Sbjct: 276 ATKRLGCE 283
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 156
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 216
Query: 591 SS 592
SS
Sbjct: 217 SS 218
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 141/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K ++F G+ Y +PEL +K
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT-EKSAC 213
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 273
Query: 284 PAKRASLE 291
KR E
Sbjct: 274 ATKRLGCE 281
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K ++F G+ Y +PEL +
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 214
Query: 591 SS 592
SS
Sbjct: 215 SS 216
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT-EKSAC 210
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 284 PAKRASLE 291
KR E
Sbjct: 271 ATKRLGCE 278
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACK 211
Query: 591 SS 592
SS
Sbjct: 212 SS 213
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 154/271 (56%), Gaps = 14/271 (5%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG-SLQKLFREVRIMKML- 102
+ + LL+ IG+G++AKV L + T + A+K++ K +N + + E + +
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+HP +V L +TE L+ V+EY +GG++ ++ ++ E+ AR +I A+ Y H
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKY 221
++ II+RDLK +N+LLDSE +IK+ D+G E PG+ FCG+P Y APE+ +G+ Y
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 198
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFD--GS-------TLRELRERVLRGKYRIPFYMSTDC 272
G VD W+LGV+++ +++G PFD GS T L + +L + RIP MS
Sbjct: 199 -GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKA 257
Query: 273 ENLLKKFLVLNPAKR-ASLEVSGEVTLGGAP 302
++LK FL +P +R L +G + G P
Sbjct: 258 ASVLKSFLNKDPKERLGCLPQTGFADIQGHP 288
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+ L +TE L+ V+EY +GG++ ++ ++ E+ AR +I A+ Y H++ I
Sbjct: 83 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI 142
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQG 585
I+RDLK +N+LLDSE +IK+ D+G E PG+ FCG+P Y APE+ +G
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 195
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAC 212
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 284 PAKRASLE 291
KR E
Sbjct: 273 ATKRLGCE 280
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 591 SS 592
SS
Sbjct: 214 SS 215
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAC 212
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 284 PAKRASLE 291
KR E
Sbjct: 273 ATKRLGCE 280
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 591 SS 592
SS
Sbjct: 214 SS 215
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAC 213
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 273
Query: 284 PAKRASLE 291
KR E
Sbjct: 274 ATKRLGCE 281
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 214
Query: 591 SS 592
SS
Sbjct: 215 SS 216
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 158
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAC 217
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 218 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 277
Query: 284 PAKRASLE 291
KR E
Sbjct: 278 ATKRLGCE 285
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 158
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 218
Query: 591 SS 592
SS
Sbjct: 219 SS 220
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAC 210
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 284 PAKRASLE 291
KR E
Sbjct: 271 ATKRLGCE 278
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 591 SS 592
SS
Sbjct: 212 SS 213
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 154/262 (58%), Gaps = 25/262 (9%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPG-SLQKLFREVRIMKMLDH 104
Y+L + IGKG F+ V+ + TG++ A+KI+D + +PG S + L RE I ML H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR----MKEKEARAKFRQIVSAVQY 160
P+IV+L + ++ LY+V E+ G ++ +V E A RQI+ A++Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 161 CHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNE-----FTPGNKLDTFCGSPPYAA 212
CH IIHRD+K EN+LL S+ N +K+ DFG + + G ++ G+P + A
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV----GTPHFMA 201
Query: 213 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP----FYM 268
PE+ + + Y P VDVW GVIL+ L+SG LPF G+ R L E +++GKY++ ++
Sbjct: 202 PEVVKREPYGKP-VDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQWSHI 259
Query: 269 STDCENLLKKFLVLNPAKRASL 290
S ++L+++ L+L+PA+R ++
Sbjct: 260 SESAKDLVRRMLMLDPAERITV 281
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR----MKEKEARAKFRQIVSAVQYCH 529
+++L + ++ LY+V E+ G ++ +V E A RQI+ A++YCH
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 530 QKKIIHRDLKAENLLLDSEMN---IKIADFGFSNE-----FTPGNKLDTFCGSPPYAAPE 581
IIHRD+K EN+LL S+ N +K+ DFG + + G ++ G+P + APE
Sbjct: 148 DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV----GTPHFMAPE 203
Query: 582 LFQG---GAPVTSSG 593
+ + G PV G
Sbjct: 204 VVKREPYGKPVDVWG 218
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAC 212
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 284 PAKRASLE 291
KR E
Sbjct: 273 ATKRLGCE 280
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 591 SS 592
SS
Sbjct: 214 SS 215
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAC 210
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 284 PAKRASLE 291
KR E
Sbjct: 271 ATKRLGCE 278
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 591 SS 592
SS
Sbjct: 212 SS 213
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 148/256 (57%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINK 59
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ G+ PY APEL +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 240 LLHKILVENPSARITI 255
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ G+ PY APEL +
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 148/252 (58%), Gaps = 13/252 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG-SLQKLFREVRIMKML-DHP 105
+ LL+ IG+G++AKV L + T + A++++ K +N + + E + + +HP
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
+V L +TE L+ V+EY +GG++ ++ ++ E+ AR +I A+ Y H++
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
II+RDLK +N+LLDSE +IK+ D+G E PG+ TFCG+P Y APE+ +G+ Y G
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY-GF 232
Query: 225 EVDVWSLGVILYTLVSGSLPFD--GS-------TLRELRERVLRGKYRIPFYMSTDCENL 275
VD W+LGV+++ +++G PFD GS T L + +L + RIP +S ++
Sbjct: 233 SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASV 292
Query: 276 LKKFLVLNPAKR 287
LK FL +P +R
Sbjct: 293 LKSFLNKDPKER 304
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+ L +TE L+ V+EY +GG++ ++ ++ E+ AR +I A+ Y H++ I
Sbjct: 115 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI 174
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQG 585
I+RDLK +N+LLDSE +IK+ D+G E PG+ TFCG+P Y APE+ +G
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG 227
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 148/256 (57%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINK 60
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ G+ PY APEL +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 241 LLHKILVENPSARITI 256
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ G+ PY APEL +
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 144/260 (55%), Gaps = 13/260 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLD 103
Y++ + +G G FA V+ + TGKE A K I K +L+ S +++ REV I++ +
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HPNI+ L + E + + L++E SGGE+FD+L + E EA +QI+ V Y H
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 164 KKIIHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
K+I H DLK EN +LLD + IK+ DFG +++ GN+ G+P + APE+ +
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 186
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI-PFYMSTDCE---NL 275
G E D+WS+GVI Y L+SG+ PF G T +E + Y Y S E +
Sbjct: 187 PL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDF 245
Query: 276 LKKFLVLNPAKRASLEVSGE 295
+++ LV +P +R ++ S E
Sbjct: 246 IRRLLVKDPKRRMTIAQSLE 265
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L + E + + L++E SGGE+FD+L + E EA +QI+ V Y H K+I
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRI 129
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IK+ DFG +++ GN+ G+P + APE+
Sbjct: 130 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 182
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 148/256 (57%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 59
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ G+ PY APEL +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 240 LLHKILVENPSARITI 255
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ G+ PY APEL +
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 139/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAX 212
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + ++++ +Y P +L++K LVL+
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 284 PAKRASLE 291
KR E
Sbjct: 273 ATKRLGCE 280
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXK 213
Query: 591 SS 592
SS
Sbjct: 214 SS 215
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K ++F G+ Y +PEL K
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS-AC 209
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 269
Query: 284 PAKRASLE 291
KR E
Sbjct: 270 ATKRLGCE 277
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K ++F G+ Y +PEL +
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 210
Query: 591 SS 592
SS
Sbjct: 211 SS 212
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 139/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAC 212
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + ++++ +Y P +L++K LVL+
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 284 PAKRASLE 291
KR E
Sbjct: 273 ATKRLGCE 280
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 591 SS 592
SS
Sbjct: 214 SS 215
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 148/256 (57%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 59
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ G+ PY APEL +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 240 LLHKILVENPSARITI 255
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ G+ PY APEL +
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 141/252 (55%), Gaps = 11/252 (4%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLD 103
+ +Y + +GKG FAK + T + A K++ K+ L P +K+ E+ I K LD
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQY 160
+P++V E + +Y+V+E + + LH R K E EAR RQ + VQY
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE---LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPPYAAPELFQG 218
H ++IHRDLK NL L+ +M++KI DFG + EF G + T CG+P Y APE+
Sbjct: 158 LHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKTLCGTPNYIAPEVL-C 215
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKK 278
KK EVD+WSLG ILYTL+ G PF+ S L+E R+ + +Y +P +++ L+++
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 275
Query: 279 FLVLNPAKRASL 290
L +P R S+
Sbjct: 276 MLHADPTLRPSV 287
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 9/108 (8%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHRD 537
E + +Y+V+E + + LH R K E EAR RQ + VQY H ++IHRD
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE---LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 538 LKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPPYAAPELF 583
LK NL L+ +M++KI DFG + EF G + T CG+P Y APE+
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKTLCGTPNYIAPEVL 214
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAC 189
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 190 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 249
Query: 284 PAKRASLE 291
KR E
Sbjct: 250 ATKRLGCE 257
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 190
Query: 591 SS 592
SS
Sbjct: 191 SS 192
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAC 190
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 191 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 250
Query: 284 PAKRASLE 291
KR E
Sbjct: 251 ATKRLGCE 258
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 191
Query: 591 SS 592
SS
Sbjct: 192 SS 193
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAC 187
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 188 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 247
Query: 284 PAKRASLE 291
KR E
Sbjct: 248 ATKRLGCE 255
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 188
Query: 591 SS 592
SS
Sbjct: 189 SS 190
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAC 188
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 189 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 248
Query: 284 PAKRASLE 291
KR E
Sbjct: 249 ATKRLGCE 256
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 189
Query: 591 SS 592
SS
Sbjct: 190 SS 191
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAC 194
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 195 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 254
Query: 284 PAKRASLE 291
KR E
Sbjct: 255 ATKRLGCE 262
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 195
Query: 591 SS 592
SS
Sbjct: 196 SS 197
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 148/256 (57%), Gaps = 11/256 (4%)
Query: 43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + P +++K E+ I K
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINK 59
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ G+ PY APEL +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 275 LLKKFLVLNPAKRASL 290
LL K LV NP+ R ++
Sbjct: 240 LLHKILVENPSARITI 255
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I HRD+K ENLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 548 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 584
N+KI+DFG + F N+ L+ G+ PY APEL +
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 139/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL K
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS-AC 209
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 269
Query: 284 PAKRASLE 291
KR E
Sbjct: 270 ATKRLGCE 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 210
Query: 591 SS 592
SS
Sbjct: 211 SS 212
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA G + Y+ G E R +IVSA++Y H K I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K ++F G+ Y +PEL +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT-EKSAS 212
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 284 PAKRASLE 291
KR E
Sbjct: 273 ATKRLGCE 280
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA G + Y+ G E R +IVSA++Y H K I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELF 583
IHRDLK EN+LL+ +M+I+I DFG + +P +K ++F G+ Y +PEL
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 139/248 (56%), Gaps = 5/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDG 223
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +K
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAC 210
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
D+W+LG I+Y LV+G PF + +++++ +Y P +L++K LVL+
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 284 PAKRASLE 291
KR E
Sbjct: 271 ATKRLGCE 278
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+KL+ + ++ LY + YA GE+ Y+ G E R +IVSA++Y H K I
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGGAPVT 590
IHRDLK EN+LL+ +M+I+I DFG + +P +K + F G+ Y +PEL +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 591 SS 592
SS
Sbjct: 212 SS 213
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 142/260 (54%), Gaps = 13/260 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLD 103
Y++ + +G G FA V+ + TGKE A K I K +L S +++ REV I++ +
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HPNI+ L + E + + L++E SGGE+FD+L + E EA +QI+ V Y H
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 147
Query: 164 KKIIHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
K+I H DLK EN +LLD + IK+ DFG +++ GN+ G+P + APE+ +
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 207
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI-PFYMSTDCE---NL 275
G E D+WS+GVI Y L+SG+ PF G T +E + Y Y S E +
Sbjct: 208 PL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDF 266
Query: 276 LKKFLVLNPAKRASLEVSGE 295
+++ LV +P +R + S E
Sbjct: 267 IRRLLVKDPKRRMXIAQSLE 286
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L + E + + L++E SGGE+FD+L + E EA +QI+ V Y H K+I
Sbjct: 91 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRI 150
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IK+ DFG +++ GN+ G+P + APE+
Sbjct: 151 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 203
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 143/260 (55%), Gaps = 13/260 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLD 103
Y++ + +G G FA V+ + TGKE A K I K +L+ S +++ REV I++ +
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HPNI+ L + E + + L++E SGGE+FD+L + E EA +QI+ V Y H
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 164 KKIIHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
K+I H DLK EN +LLD + IK+ DFG +++ GN+ G+P + APE+ +
Sbjct: 134 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 193
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI-PFYMSTDCE---NL 275
G E D+WS+GVI Y L+SG+ PF G T +E + Y Y S E +
Sbjct: 194 PL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDF 252
Query: 276 LKKFLVLNPAKRASLEVSGE 295
+++ LV +P +R + S E
Sbjct: 253 IRRLLVKDPKRRMXIAQSLE 272
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L + E + + L++E SGGE+FD+L + E EA +QI+ V Y H K+I
Sbjct: 77 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRI 136
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IK+ DFG +++ GN+ G+P + APE+
Sbjct: 137 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 189
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 143/247 (57%), Gaps = 3/247 (1%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLD 103
I +++ + +GKG F V LA+ + VA+K++ K+Q+ G +L RE+ I L
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HPNI++L+ + +YL++EYA GE++ L E+ ++ A+ YCH
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHG 141
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
KK+IHRD+K ENLLL + +KIADFG+S P + T CG+ Y PE+ +G+ ++
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWSVH-APSLRRKTMCGTLDYLPPEMIEGRMHNE 200
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
+VD+W +GV+ Y L+ G+ PF+ ++ E R+++ + P + T ++L+ K L N
Sbjct: 201 -KVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLRHN 259
Query: 284 PAKRASL 290
P++R L
Sbjct: 260 PSERLPL 266
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ + +YL++EYA GE++ L E+ ++ A+ YCH KK+
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKV 144
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL + +KIADFG+S P + T CG+ Y PE+ +G
Sbjct: 145 IHRDIKPENLLLGLKGELKIADFGWSVH-APSLRRKTMCGTLDYLPPEMIEG 195
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 148/255 (58%), Gaps = 13/255 (5%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG-SLQKLFREVRIMKML- 102
+ + LL+ IG+G++AKV L + T + A+K++ K +N + + E + +
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+HP +V L +TE L+ V+EY +GG++ ++ ++ E+ AR +I A+ Y H
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKY 221
++ II+RDLK +N+LLDSE +IK+ D+G E PG+ FCG+P Y APE+ +G+ Y
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 183
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFD--GS-------TLRELRERVLRGKYRIPFYMSTDC 272
G VD W+LGV+++ +++G PFD GS T L + +L + RIP +S
Sbjct: 184 -GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA 242
Query: 273 ENLLKKFLVLNPAKR 287
++LK FL +P +R
Sbjct: 243 ASVLKSFLNKDPKER 257
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+ L +TE L+ V+EY +GG++ ++ ++ E+ AR +I A+ Y H++ I
Sbjct: 68 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI 127
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQG 585
I+RDLK +N+LLDSE +IK+ D+G E PG+ FCG+P Y APE+ +G
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 180
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 140/252 (55%), Gaps = 11/252 (4%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLD 103
+ +Y + +GKG FAK + T + A K++ K+ L P +K+ E+ I K LD
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQY 160
+P++V E + +Y+V+E + + LH R K E EAR RQ + VQY
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE---LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPPYAAPELFQG 218
H ++IHRDLK NL L+ +M++KI DFG + EF G + CG+P Y APE+
Sbjct: 158 LHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKXLCGTPNYIAPEVL-C 215
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKK 278
KK EVD+WSLG ILYTL+ G PF+ S L+E R+ + +Y +P +++ L+++
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 275
Query: 279 FLVLNPAKRASL 290
L +P R S+
Sbjct: 276 MLHADPTLRPSV 287
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 9/108 (8%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHRD 537
E + +Y+V+E + + LH R K E EAR RQ + VQY H ++IHRD
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE---LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 538 LKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPPYAAPELF 583
LK NL L+ +M++KI DFG + EF G + CG+P Y APE+
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKXLCGTPNYIAPEVL 214
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 147/252 (58%), Gaps = 13/252 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG-SLQKLFREVRIMKML-DHP 105
+ LL+ IG+G++AKV L + T + A+K++ K +N + + E + + +HP
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
+V L +TE L+ V+EY +GG++ ++ ++ E+ AR +I A+ Y H++
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
II+RDLK +N+LLDSE +IK+ D+G E PG+ FCG+P Y APE+ +G+ Y G
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY-GF 189
Query: 225 EVDVWSLGVILYTLVSGSLPFD--GS-------TLRELRERVLRGKYRIPFYMSTDCENL 275
VD W+LGV+++ +++G PFD GS T L + +L + RIP +S ++
Sbjct: 190 SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASV 249
Query: 276 LKKFLVLNPAKR 287
LK FL +P +R
Sbjct: 250 LKSFLNKDPKER 261
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+ L +TE L+ V+EY +GG++ ++ ++ E+ AR +I A+ Y H++ I
Sbjct: 72 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI 131
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQG 585
I+RDLK +N+LLDSE +IK+ D+G E PG+ FCG+P Y APE+ +G
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 184
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 140/252 (55%), Gaps = 11/252 (4%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLD 103
+ +Y + +GKG FAK + T + A K++ K+ L P +K+ E+ I K LD
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQY 160
+P++V E + +Y+V+E + + LH R K E EAR RQ + VQY
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE---LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPPYAAPELFQG 218
H ++IHRDLK NL L+ +M++KI DFG + EF G + CG+P Y APE+
Sbjct: 158 LHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKDLCGTPNYIAPEVL-C 215
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKK 278
KK EVD+WSLG ILYTL+ G PF+ S L+E R+ + +Y +P +++ L+++
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 275
Query: 279 FLVLNPAKRASL 290
L +P R S+
Sbjct: 276 MLHADPTLRPSV 287
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 9/108 (8%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHRD 537
E + +Y+V+E + + LH R K E EAR RQ + VQY H ++IHRD
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE---LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 538 LKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPPYAAPELF 583
LK NL L+ +M++KI DFG + EF G + CG+P Y APE+
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKDLCGTPNYIAPEVL 214
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 144/274 (52%), Gaps = 21/274 (7%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVP---TGKEVAIKIIDKTQL--NPGSLQKLFREVRIMKML 102
++LL+ +GKG + KV + V TGK A+K++ K + N E I++ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
HP IV L +T LYL++EY SGGE+F L G E A +I A+ + H
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKY 221
QK II+RDLK EN++L+ + ++K+ DFG E G TFCG+ Y APE+ +
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLV 281
+ VD WSLG ++Y +++G+ PF G ++ +++L+ K +P Y++ + +LLKK L
Sbjct: 199 NRA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLK 257
Query: 282 LNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTH 315
N A R LG P G AG H
Sbjct: 258 RNAASR----------LGAGP----GDAGEVQAH 277
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +T LYL++EY SGGE+F L G E A +I A+ + HQK I
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELF 583
I+RDLK EN++L+ + ++K+ DFG E G TFCG+ Y APE+
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEIL 193
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 140/252 (55%), Gaps = 11/252 (4%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLD 103
+ +Y + +GKG FAK + T + A K++ K+ L P +K+ E+ I K LD
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 84
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQY 160
+P++V E + +Y+V+E + + LH R K E EAR RQ + VQY
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE---LHKRRKAVTEPEARYFMRQTIQGVQY 141
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPPYAAPELFQG 218
H ++IHRDLK NL L+ +M++KI DFG + EF G + CG+P Y APE+
Sbjct: 142 LHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKDLCGTPNYIAPEVL-C 199
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKK 278
KK EVD+WSLG ILYTL+ G PF+ S L+E R+ + +Y +P +++ L+++
Sbjct: 200 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 259
Query: 279 FLVLNPAKRASL 290
L +P R S+
Sbjct: 260 MLHADPTLRPSV 271
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 9/108 (8%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHRD 537
E + +Y+V+E + + LH R K E EAR RQ + VQY H ++IHRD
Sbjct: 95 FEDDDFVYVVLEICRRRSLLE---LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 151
Query: 538 LKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPPYAAPELF 583
LK NL L+ +M++KI DFG + EF G + CG+P Y APE+
Sbjct: 152 LKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKDLCGTPNYIAPEVL 198
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 134/252 (53%), Gaps = 13/252 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQ------LNPGSLQKLFREVRIMK 100
KY + +G G F V A KEV +K I K + + L K+ E+ I+
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 101 MLDHPNIVKLFQVIETEKTLYLVME-YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 159
++H NI+K+ + E + LVME + SG ++F ++ H R+ E A FRQ+VSAV
Sbjct: 85 RVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG 144
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
Y K IIHRD+K EN+++ + IK+ DFG + G TFCG+ Y APE+ G
Sbjct: 145 YLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGN 204
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKF 279
Y GPE+++WSLGV LYTLV F+ + EL E V P+ +S + +L+
Sbjct: 205 PYRGPELEMWSLGVTLYTLV-----FEENPFCELEETV-EAAIHPPYLVSKELMSLVSGL 258
Query: 280 LVLNPAKRASLE 291
L P +R +LE
Sbjct: 259 LQPVPERRTTLE 270
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 474 LLKLFQVIETEKTLYLVME-YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 532
++K+ + E + LVME + SG ++F ++ H R+ E A FRQ+VSAV Y K
Sbjct: 91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD 150
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IIHRD+K EN+++ + IK+ DFG + G TFCG+ Y APE+ G
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMG 203
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 139/252 (55%), Gaps = 13/252 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT-QLNPGSLQKLFREVRIMKMLDHPN 106
+ ++ +G G F++V L K TGK A+K I K+ SL+ E+ ++K + H N
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE---NEIAVLKKIKHEN 67
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV L + E+ YLVM+ SGGE+FD ++ G EK+A +Q++SAV+Y H+ I
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGI 127
Query: 167 IHRDLKAENLL-LDSEMN--IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+HRDLK ENLL L E N I I DFG S + + T CG+P Y APE+ K Y
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLS-KMEQNGIMSTACGTPGYVAPEVLAQKPYSK 186
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFY--MSTDCENLLKKF 279
VD WS+GVI Y L+ G PF T +L E++ G Y PF+ +S ++ +
Sbjct: 187 A-VDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHL 245
Query: 280 LVLNPAKRASLE 291
L +P +R + E
Sbjct: 246 LEKDPNERYTCE 257
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
E ++ L + E+ YLVM+ SGGE+FD ++ G EK+A +Q++SAV+Y H+
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 532 KIIHRDLKAENLL-LDSEMN--IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
I+HRDLK ENLL L E N I I DFG S + + T CG+P Y APE+
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLS-KMEQNGIMSTACGTPGYVAPEVL 179
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 143/274 (52%), Gaps = 21/274 (7%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVP---TGKEVAIKIIDKTQL--NPGSLQKLFREVRIMKML 102
++LL+ +GKG + KV + V TGK A+K++ K + N E I++ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
HP IV L +T LYL++EY SGGE+F L G E A +I A+ + H
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKY 221
QK II+RDLK EN++L+ + ++K+ DFG E G FCG+ Y APE+ +
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLV 281
+ VD WSLG ++Y +++G+ PF G ++ +++L+ K +P Y++ + +LLKK L
Sbjct: 199 NRA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLK 257
Query: 282 LNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTH 315
N A R LG P G AG H
Sbjct: 258 RNAASR----------LGAGP----GDAGEVQAH 277
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +T LYL++EY SGGE+F L G E A +I A+ + HQK I
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELF 583
I+RDLK EN++L+ + ++K+ DFG E G FCG+ Y APE+
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEIL 193
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 139/258 (53%), Gaps = 4/258 (1%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK-TQLNPGSLQKLFREVRIM 99
D + + L +GKG+F KV LA T + AIKI+ K + ++ E R++
Sbjct: 14 DRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVL 73
Query: 100 KMLDHPNIV-KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 158
+LD P + +L +T LY VMEY +GG++ ++ G+ KE +A +I +
Sbjct: 74 ALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGL 133
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 217
+ H++ II+RDLK +N++LDSE +IKIADFG E G FCG+P Y APE+
Sbjct: 134 FFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIA 193
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLK 277
+ Y G VD W+ GV+LY +++G PFDG EL + ++ P +S + ++ K
Sbjct: 194 YQPY-GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICK 252
Query: 278 KFLVLNPAKRASLEVSGE 295
+ +PAKR GE
Sbjct: 253 GLMTKHPAKRLGCGPEGE 270
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L +L +T LY VMEY +GG++ ++ G+ KE +A +I + + H++ I
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGI 141
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPEL 582
I+RDLK +N++LDSE +IKIADFG E G FCG+P Y APE+
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEI 191
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 138/246 (56%), Gaps = 9/246 (3%)
Query: 48 YKLLKTIGKGNFAKVKLAKHV---PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
++LLK +G+G+F KV L + V +G A+K++ K L + E I+ ++H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
P +VKL +TE LYL++++ GG++F L E++ + ++ + + H
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSL 149
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELF--QGKKY 221
II+RDLK EN+LLD E +IK+ DFG S E K +FCG+ Y APE+ QG +
Sbjct: 150 GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSH 209
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLV 281
D WS GV+++ +++GSLPF G +E +L+ K +P ++ST+ ++LL+
Sbjct: 210 SA---DWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFK 266
Query: 282 LNPAKR 287
NPA R
Sbjct: 267 RNPANR 272
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL +TE LYL++++ GG++F L E++ + ++ + + H I
Sbjct: 92 VVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGI 151
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPEL 582
I+RDLK EN+LLD E +IK+ DFG S E K +FCG+ Y APE+
Sbjct: 152 IYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEV 201
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 145/257 (56%), Gaps = 10/257 (3%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK-TQLNPGSLQKLFREVRIMKM-L 102
I ++L K +GKG+F KV LA+ T + AIK + K L ++ E R++ +
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQY 160
+HP + +F +T++ L+ VMEY +GG++ ++ K +RA F +I+ +Q+
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQF 134
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGK 219
H K I++RDLK +N+LLD + +IKIADFG E G+ K + FCG+P Y APE+ G+
Sbjct: 135 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQ 194
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKF 279
KY+ VD WS GV+LY ++ G PF G EL + P ++ + ++LL K
Sbjct: 195 KYNH-SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKL 253
Query: 280 LVLNPAKRASLEVSGEV 296
V P KR L V G++
Sbjct: 254 FVREPEKR--LGVRGDI 268
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 71/115 (61%), Gaps = 5/115 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L +F +T++ L+ VMEY +GG++ ++ K +RA F +I+ +Q+ H K
Sbjct: 81 LTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSK 138
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQG 585
I++RDLK +N+LLD + +IKIADFG E G+ K + FCG+P Y APE+ G
Sbjct: 139 GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG 193
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 138/256 (53%), Gaps = 13/256 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLD 103
Y + + +G G FA VK + TG E A K I K Q +++ REV I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
HPNI+ L V E + L++E SGGE+FD+L + E+EA + +QI+ V Y H
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 164 KKIIHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
KKI H DLK EN +LLD + +IK+ DFG ++E G + G+P + APE+ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENL 275
G E D+WS+GVI Y L+SG+ PF G T +E + Y F+ T ++
Sbjct: 194 PL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDF 252
Query: 276 LKKFLVLNPAKRASLE 291
++K LV KR +++
Sbjct: 253 IRKLLVKETRKRLTIQ 268
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L V E + L++E SGGE+FD+L + E+EA + +QI+ V Y H KKI
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + +IK+ DFG ++E G + G+P + APE+
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 144/257 (56%), Gaps = 10/257 (3%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK-TQLNPGSLQKLFREVRIMKM-L 102
I + L K +GKG+F KV LA+ T + AIK + K L ++ E R++ +
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQY 160
+HP + +F +T++ L+ VMEY +GG++ ++ K +RA F +I+ +Q+
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQF 133
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGK 219
H K I++RDLK +N+LLD + +IKIADFG E G+ K + FCG+P Y APE+ G+
Sbjct: 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQ 193
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKF 279
KY+ VD WS GV+LY ++ G PF G EL + P ++ + ++LL K
Sbjct: 194 KYNH-SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKL 252
Query: 280 LVLNPAKRASLEVSGEV 296
V P KR L V G++
Sbjct: 253 FVREPEKR--LGVRGDI 267
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 71/115 (61%), Gaps = 5/115 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L +F +T++ L+ VMEY +GG++ ++ K +RA F +I+ +Q+ H K
Sbjct: 80 LTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSK 137
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQG 585
I++RDLK +N+LLD + +IKIADFG E G+ K + FCG+P Y APE+ G
Sbjct: 138 GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG 192
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 151/262 (57%), Gaps = 25/262 (9%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPG-SLQKLFREVRIMKMLDH 104
Y+L + IGKG F+ V+ + TG++ A+KI+D + +PG S + L RE I ML H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR----MKEKEARAKFRQIVSAVQY 160
P+IV+L + ++ LY+V E+ G ++ +V E A RQI+ A++Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 161 CHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNE-----FTPGNKLDTFCGSPPYAA 212
CH IIHRD+K +LL S+ N +K+ FG + + G ++ G+P + A
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV----GTPHFMA 203
Query: 213 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP----FYM 268
PE+ + + Y P VDVW GVIL+ L+SG LPF G+ R L E +++GKY++ ++
Sbjct: 204 PEVVKREPYGKP-VDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQWSHI 261
Query: 269 STDCENLLKKFLVLNPAKRASL 290
S ++L+++ L+L+PA+R ++
Sbjct: 262 SESAKDLVRRMLMLDPAERITV 283
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 19/135 (14%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR----MKEKEARAKFRQIVSAVQYCH 529
+++L + ++ LY+V E+ G ++ +V E A RQI+ A++YCH
Sbjct: 90 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 149
Query: 530 QKKIIHRDLKAENLLLDSEMN---IKIADFGFSNE-----FTPGNKLDTFCGSPPYAAPE 581
IIHRD+K +LL S+ N +K+ FG + + G ++ G+P + APE
Sbjct: 150 DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV----GTPHFMAPE 205
Query: 582 LFQG---GAPVTSSG 593
+ + G PV G
Sbjct: 206 VVKREPYGKPVDVWG 220
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 151/262 (57%), Gaps = 25/262 (9%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPG-SLQKLFREVRIMKMLDH 104
Y+L + IGKG F+ V+ + TG++ A+KI+D + +PG S + L RE I ML H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR----MKEKEARAKFRQIVSAVQY 160
P+IV+L + ++ LY+V E+ G ++ +V E A RQI+ A++Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 161 CHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNE-----FTPGNKLDTFCGSPPYAA 212
CH IIHRD+K +LL S+ N +K+ FG + + G ++ G+P + A
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV----GTPHFMA 201
Query: 213 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP----FYM 268
PE+ + + Y P VDVW GVIL+ L+SG LPF G+ R L E +++GKY++ ++
Sbjct: 202 PEVVKREPYGKP-VDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQWSHI 259
Query: 269 STDCENLLKKFLVLNPAKRASL 290
S ++L+++ L+L+PA+R ++
Sbjct: 260 SESAKDLVRRMLMLDPAERITV 281
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 19/135 (14%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR----MKEKEARAKFRQIVSAVQYCH 529
+++L + ++ LY+V E+ G ++ +V E A RQI+ A++YCH
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 530 QKKIIHRDLKAENLLLDSEMN---IKIADFGFSNE-----FTPGNKLDTFCGSPPYAAPE 581
IIHRD+K +LL S+ N +K+ FG + + G ++ G+P + APE
Sbjct: 148 DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV----GTPHFMAPE 203
Query: 582 LFQG---GAPVTSSG 593
+ + G PV G
Sbjct: 204 VVKREPYGKPVDVWG 218
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 13/252 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLDHPNIVK 109
+G G FA VK + TG + A K I K + S + + REV I+K + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 170 DLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+ + G E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLE 197
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENLLKKFLV 281
D+WS+GVI Y L+SG+ PF G T +E V Y ++ +T ++ +++ LV
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 282 LNPAKRASLEVS 293
+P KR +++ S
Sbjct: 258 KDPKKRMTIQDS 269
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 139/246 (56%), Gaps = 7/246 (2%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEV----AIKIIDKTQLNPGSLQKLFREVRIMKML 102
+++LLK +G+G+F KV L K + +G + A+K++ K L + E I+ +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKI-SGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+HP IVKL +TE LYL++++ GG++F L E++ + ++ A+ + H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKY 221
II+RDLK EN+LLD E +IK+ DFG S E K +FCG+ Y APE+ + +
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLV 281
D WS GV+++ +++G+LPF G +E +L+ K +P ++S + ++LL+
Sbjct: 204 T-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFK 262
Query: 282 LNPAKR 287
NPA R
Sbjct: 263 RNPANR 268
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL +TE LYL++++ GG++F L E++ + ++ A+ + H I
Sbjct: 88 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI 147
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPEL 582
I+RDLK EN+LLD E +IK+ DFG S E K +FCG+ Y APE+
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 13/252 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLDHPNIVK 109
+G G FA VK + TG + A K I K + S + + REV I+K + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 170 DLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+ + G E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPL-GLE 197
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENLLKKFLV 281
D+WS+GVI Y L+SG+ PF G T +E V Y ++ +T ++ +++ LV
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 282 LNPAKRASLEVS 293
+P KR +++ S
Sbjct: 258 KDPKKRMTIQDS 269
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEI 188
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 13/252 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLDHPNIVK 109
+G G FA VK + TG + A K I K + S + + REV I+K + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 170 DLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+ + G E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLE 197
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENLLKKFLV 281
D+WS+GVI Y L+SG+ PF G T +E V Y ++ +T ++ +++ LV
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 282 LNPAKRASLEVS 293
+P KR +++ S
Sbjct: 258 KDPKKRMTIQDS 269
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 139/246 (56%), Gaps = 7/246 (2%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEV----AIKIIDKTQLNPGSLQKLFREVRIMKML 102
+++LLK +G+G+F KV L K + +G + A+K++ K L + E I+ +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKI-SGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+HP IVKL +TE LYL++++ GG++F L E++ + ++ A+ + H
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKY 221
II+RDLK EN+LLD E +IK+ DFG S E K +FCG+ Y APE+ + +
Sbjct: 145 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLV 281
D WS GV+++ +++G+LPF G +E +L+ K +P ++S + ++LL+
Sbjct: 205 T-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFK 263
Query: 282 LNPAKR 287
NPA R
Sbjct: 264 RNPANR 269
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL +TE LYL++++ GG++F L E++ + ++ A+ + H I
Sbjct: 89 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI 148
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPEL 582
I+RDLK EN+LLD E +IK+ DFG S E K +FCG+ Y APE+
Sbjct: 149 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 198
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 13/252 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLDHPNIVK 109
+G G FA VK + TG + A K I K + S + + REV I+K + HPN++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I H
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 170 DLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+ + G E
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLE 196
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENLLKKFLV 281
D+WS+GVI Y L+SG+ PF G T +E V Y ++ +T ++ +++ LV
Sbjct: 197 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 256
Query: 282 LNPAKRASLEVS 293
+P KR +++ S
Sbjct: 257 KDPKKRMTIQDS 268
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 134
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 187
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 139/246 (56%), Gaps = 7/246 (2%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEV----AIKIIDKTQLNPGSLQKLFREVRIMKML 102
+++LLK +G+G+F KV L K + +G + A+K++ K L + E I+ +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKI-SGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+HP IVKL +TE LYL++++ GG++F L E++ + ++ A+ + H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKY 221
II+RDLK EN+LLD E +IK+ DFG S E K +FCG+ Y APE+ + +
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLV 281
D WS GV+++ +++G+LPF G +E +L+ K +P ++S + ++LL+
Sbjct: 204 T-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFK 262
Query: 282 LNPAKR 287
NPA R
Sbjct: 263 RNPANR 268
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KL +TE LYL++++ GG++F L E++ + ++ A+ + H I
Sbjct: 88 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI 147
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPEL 582
I+RDLK EN+LLD E +IK+ DFG S E K +FCG+ Y APE+
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 13/252 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLDHPNIVK 109
+G G FA VK + TG + A K I K + S + + REV I+K + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 170 DLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+ + G E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLE 197
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENLLKKFLV 281
D+WS+GVI Y L+SG+ PF G T +E V Y ++ +T ++ +++ LV
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 282 LNPAKRASLEVS 293
+P KR +++ S
Sbjct: 258 KDPKKRMTIQDS 269
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 13/252 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLDHPNIVK 109
+G G FA VK + TG + A K I K + S + + REV I+K + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 170 DLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+ + G E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLE 197
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENLLKKFLV 281
D+WS+GVI Y L+SG+ PF G T +E V Y ++ +T ++ +++ LV
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 282 LNPAKRASLEVS 293
+P KR +++ S
Sbjct: 258 KDPKKRMTIQDS 269
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 13/252 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLDHPNIVK 109
+G G FA VK + TG + A K I K + S + + REV I+K + HPN++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I H
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 170 DLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+ + G E
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLE 196
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENLLKKFLV 281
D+WS+GVI Y L+SG+ PF G T +E V Y ++ +T ++ +++ LV
Sbjct: 197 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 256
Query: 282 LNPAKRASLEVS 293
+P KR +++ S
Sbjct: 257 KDPKKRMTIQDS 268
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 134
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 187
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 13/252 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLDHPNIVK 109
+G G FA VK + TG + A K I K + S + + REV I+K + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 170 DLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+ + G E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLE 197
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENLLKKFLV 281
D+WS+GVI Y L+SG+ PF G T +E V Y ++ +T ++ +++ LV
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 282 LNPAKRASLEVS 293
+P KR +++ S
Sbjct: 258 KDPKKRMTIQDS 269
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 13/252 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLDHPNIVK 109
+G G FA VK + TG + A K I K + S + + REV I+K + HPN++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 170 DLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+ + G E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLE 197
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENLLKKFLV 281
D+WS+GVI Y L+SG+ PF G T +E V Y ++ +T ++ +++ LV
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 282 LNPAKRASLEVS 293
+P KR +++ S
Sbjct: 258 KDPKKRMTIQDS 269
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 133/242 (54%), Gaps = 9/242 (3%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQ 112
+GKG FAK T + A KI+ K+ L P +K+ E+ I + L H ++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 113 VIETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHR 169
E +++V+E + + LH R K E EAR RQIV QY H+ ++IHR
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLE---LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 145
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 228
DLK NL L+ ++ +KI DFG + + G + T CG+P Y APE+ K + EVDV
Sbjct: 146 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF-EVDV 204
Query: 229 WSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA 288
WS+G I+YTL+ G PF+ S L+E R+ + +Y IP +++ +L++K L +P R
Sbjct: 205 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 264
Query: 289 SL 290
++
Sbjct: 265 TI 266
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHRD 537
E +++V+E + + LH R K E EAR RQIV QY H+ ++IHRD
Sbjct: 90 FEDNDFVFVVLELCRRRSLLE---LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 538 LKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELF 583
LK NL L+ ++ +KI DFG + + G + T CG+P Y APE+
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL 193
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 133/242 (54%), Gaps = 9/242 (3%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQ 112
+GKG FAK T + A KI+ K+ L P +K+ E+ I + L H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 113 VIETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHR 169
E +++V+E + + LH R K E EAR RQIV QY H+ ++IHR
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE---LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 228
DLK NL L+ ++ +KI DFG + + G + T CG+P Y APE+ KK EVDV
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVDV 200
Query: 229 WSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA 288
WS+G I+YTL+ G PF+ S L+E R+ + +Y IP +++ +L++K L +P R
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 260
Query: 289 SL 290
++
Sbjct: 261 TI 262
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHRD 537
E +++V+E + + LH R K E EAR RQIV QY H+ ++IHRD
Sbjct: 86 FEDNDFVFVVLELCRRRSLLE---LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 538 LKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELF 583
LK NL L+ ++ +KI DFG + + G + T CG+P Y APE+
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL 189
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 133/242 (54%), Gaps = 9/242 (3%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQ 112
+GKG FAK T + A KI+ K+ L P +K+ E+ I + L H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 113 VIETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHR 169
E +++V+E + + LH R K E EAR RQIV QY H+ ++IHR
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE---LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 228
DLK NL L+ ++ +KI DFG + + G + T CG+P Y APE+ KK EVDV
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVDV 200
Query: 229 WSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA 288
WS+G I+YTL+ G PF+ S L+E R+ + +Y IP +++ +L++K L +P R
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 260
Query: 289 SL 290
++
Sbjct: 261 TI 262
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHRD 537
E +++V+E + + LH R K E EAR RQIV QY H+ ++IHRD
Sbjct: 86 FEDNDFVFVVLELCRRRSLLE---LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 538 LKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELF 583
LK NL L+ ++ +KI DFG + + G + T CG+P Y APE+
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL 189
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 13/252 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLDHPNIVK 109
+G G FA VK + TG + A K I K + S + + REV I+K + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 170 DLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+ + G E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLE 197
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENLLKKFLV 281
D+WS+GVI Y L+SG+ PF G T +E V Y ++ +T ++ +++ LV
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 282 LNPAKRASLEVS 293
+P KR +++ S
Sbjct: 258 KDPKKRMTIQDS 269
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 13/252 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLDHPNIVK 109
+G G FA VK + TG + A K I K + S + + REV I+K + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 170 DLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+ + G E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLE 197
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENLLKKFLV 281
D+WS+GVI Y L+SG+ PF G T +E V Y ++ +T ++ +++ LV
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 282 LNPAKRASLEVS 293
+P KR +++ S
Sbjct: 258 KDPKKRMTIQDS 269
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 13/252 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLDHPNIVK 109
+G G FA VK + TG + A K I K + S + + REV I+K + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 170 DLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+ + G E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLE 197
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENLLKKFLV 281
D+WS+GVI Y L+SG+ PF G T +E V Y ++ +T ++ +++ LV
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 282 LNPAKRASLEVS 293
+P KR +++ S
Sbjct: 258 KDPKKRMTIQDS 269
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 13/252 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLDHPNIVK 109
+G G FA VK + TG + A K I K + S + + REV I+K + HPN++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 170 DLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+ + G E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLE 197
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENLLKKFLV 281
D+WS+GVI Y L+SG+ PF G T +E V Y ++ +T ++ +++ LV
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 282 LNPAKRASLEVS 293
+P KR +++ S
Sbjct: 258 KDPKKRMTIQDS 269
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 138/256 (53%), Gaps = 13/256 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLD 103
Y + + +G G FA VK + TG E A K I K Q S +++ REV I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
H N++ L V E + L++E SGGE+FD+L + E+EA + +QI+ V Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 164 KKIIHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
KKI H DLK EN +LLD + +IK+ DFG ++E G + G+P + APE+ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENL 275
G E D+WS+GVI Y L+SG+ PF G T +E + Y F+ T ++
Sbjct: 194 PL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDF 252
Query: 276 LKKFLVLNPAKRASLE 291
++K LV KR +++
Sbjct: 253 IRKLLVKETRKRLTIQ 268
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 448 SHRGVHRSISASNAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG 507
S RGV R R+ ++ L V E + L++E SGGE+FD+L
Sbjct: 53 SRRGVSREEIEREVSILRQVLH--HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE 110
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN-LLLDSEM---NIKIADFGFSNEFT 563
+ E+EA + +QI+ V Y H KKI H DLK EN +LLD + +IK+ DFG ++E
Sbjct: 111 SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 564 PGNKLDTFCGSPPYAAPEL 582
G + G+P + APE+
Sbjct: 171 DGVEFKNIFGTPEFVAPEI 189
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 138/256 (53%), Gaps = 13/256 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLD 103
Y + + +G G FA VK + TG E A K I K Q S +++ REV I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
H N++ L V E + L++E SGGE+FD+L + E+EA + +QI+ V Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 164 KKIIHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
KKI H DLK EN +LLD + +IK+ DFG ++E G + G+P + APE+ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENL 275
G E D+WS+GVI Y L+SG+ PF G T +E + Y F+ T ++
Sbjct: 194 PL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDF 252
Query: 276 LKKFLVLNPAKRASLE 291
++K LV KR +++
Sbjct: 253 IRKLLVKETRKRLTIQ 268
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 448 SHRGVHRSISASNAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG 507
S RGV R R+ ++ L V E + L++E SGGE+FD+L
Sbjct: 53 SRRGVSREEIEREVSILRQVLH--HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE 110
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN-LLLDSEM---NIKIADFGFSNEFT 563
+ E+EA + +QI+ V Y H KKI H DLK EN +LLD + +IK+ DFG ++E
Sbjct: 111 SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 564 PGNKLDTFCGSPPYAAPEL 582
G + G+P + APE+
Sbjct: 171 DGVEFKNIFGTPEFVAPEI 189
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 138/256 (53%), Gaps = 13/256 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLD 103
Y + + +G G FA VK + TG E A K I K Q S +++ REV I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
H N++ L V E + L++E SGGE+FD+L + E+EA + +QI+ V Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 164 KKIIHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
KKI H DLK EN +LLD + +IK+ DFG ++E G + G+P + APE+ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENL 275
G E D+WS+GVI Y L+SG+ PF G T +E + Y F+ T ++
Sbjct: 194 PL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDF 252
Query: 276 LKKFLVLNPAKRASLE 291
++K LV KR +++
Sbjct: 253 IRKLLVKETRKRLTIQ 268
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 448 SHRGVHRSISASNAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG 507
S RGV R R+ ++ L V E + L++E SGGE+FD+L
Sbjct: 53 SRRGVSREEIEREVSILRQVLH--HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE 110
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN-LLLDSEM---NIKIADFGFSNEFT 563
+ E+EA + +QI+ V Y H KKI H DLK EN +LLD + +IK+ DFG ++E
Sbjct: 111 SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 564 PGNKLDTFCGSPPYAAPEL 582
G + G+P + APE+
Sbjct: 171 DGVEFKNIFGTPEFVAPEI 189
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 138/256 (53%), Gaps = 13/256 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLD 103
Y + + +G G FA VK + TG E A K I K Q S +++ REV I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
H N++ L V E + L++E SGGE+FD+L + E+EA + +QI+ V Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 164 KKIIHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
KKI H DLK EN +LLD + +IK+ DFG ++E G + G+P + APE+ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENL 275
G E D+WS+GVI Y L+SG+ PF G T +E + Y F+ T ++
Sbjct: 194 PL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDF 252
Query: 276 LKKFLVLNPAKRASLE 291
++K LV KR +++
Sbjct: 253 IRKLLVKETRKRLTIQ 268
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 448 SHRGVHRSISASNAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG 507
S RGV R R+ ++ L V E + L++E SGGE+FD+L
Sbjct: 53 SRRGVSREEIEREVSILRQVLH--HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE 110
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN-LLLDSEM---NIKIADFGFSNEFT 563
+ E+EA + +QI+ V Y H KKI H DLK EN +LLD + +IK+ DFG ++E
Sbjct: 111 SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 564 PGNKLDTFCGSPPYAAPEL 582
G + G+P + APE+
Sbjct: 171 DGVEFKNIFGTPEFVAPEI 189
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 138/256 (53%), Gaps = 13/256 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLD 103
Y + + +G G FA VK + TG E A K I K Q S +++ REV I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
H N++ L V E + L++E SGGE+FD+L + E+EA + +QI+ V Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 164 KKIIHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
KKI H DLK EN +LLD + +IK+ DFG ++E G + G+P + APE+ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENL 275
G E D+WS+GVI Y L+SG+ PF G T +E + Y F+ T ++
Sbjct: 194 PL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDF 252
Query: 276 LKKFLVLNPAKRASLE 291
++K LV KR +++
Sbjct: 253 IRKLLVKETRKRLTIQ 268
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 448 SHRGVHRSISASNAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG 507
S RGV R R+ ++ L V E + L++E SGGE+FD+L
Sbjct: 53 SRRGVSREEIEREVSILRQVLH--HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE 110
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN-LLLDSEM---NIKIADFGFSNEFT 563
+ E+EA + +QI+ V Y H KKI H DLK EN +LLD + +IK+ DFG ++E
Sbjct: 111 SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 564 PGNKLDTFCGSPPYAAPEL 582
G + G+P + APE+
Sbjct: 171 DGVEFKNIFGTPEFVAPEI 189
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 132/242 (54%), Gaps = 9/242 (3%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQ 112
+GKG FAK T + A KI+ K+ L P +K+ E+ I + L H ++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 113 VIETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHR 169
E +++V+E + + LH R K E EAR RQIV QY H+ ++IHR
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLE---LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 165
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 228
DLK NL L+ ++ +KI DFG + + G + CG+P Y APE+ K + EVDV
Sbjct: 166 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF-EVDV 224
Query: 229 WSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA 288
WS+G I+YTL+ G PF+ S L+E R+ + +Y IP +++ +L++K L +P R
Sbjct: 225 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 284
Query: 289 SL 290
++
Sbjct: 285 TI 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHRD 537
E +++V+E + + LH R K E EAR RQIV QY H+ ++IHRD
Sbjct: 110 FEDNDFVFVVLELCRRRSLLE---LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 538 LKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELF 583
LK NL L+ ++ +KI DFG + + G + CG+P Y APE+
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL 213
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 132/242 (54%), Gaps = 9/242 (3%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQ 112
+GKG FAK T + A KI+ K+ L P +K+ E+ I + L H ++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 113 VIETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHR 169
E +++V+E + + LH R K E EAR RQIV QY H+ ++IHR
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLE---LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 163
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 228
DLK NL L+ ++ +KI DFG + + G + CG+P Y APE+ K + EVDV
Sbjct: 164 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF-EVDV 222
Query: 229 WSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA 288
WS+G I+YTL+ G PF+ S L+E R+ + +Y IP +++ +L++K L +P R
Sbjct: 223 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 282
Query: 289 SL 290
++
Sbjct: 283 TI 284
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHRD 537
E +++V+E + + LH R K E EAR RQIV QY H+ ++IHRD
Sbjct: 108 FEDNDFVFVVLELCRRRSLLE---LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 538 LKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELF 583
LK NL L+ ++ +KI DFG + + G + CG+P Y APE+
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL 211
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 139/252 (55%), Gaps = 13/252 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKMLDHPNIVK 109
+G G FA VK + TG + A K I K + S + + REV I+K + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
L +V E + + L+ E +GGE+FD+L + E+EA +QI++ V Y H +I H
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 170 DLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+ + G E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLE 197
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PFYMSTD--CENLLKKFLV 281
D+WS+GVI Y L+SG+ PF G T +E V Y ++ +T ++ +++ LV
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 282 LNPAKRASLEVS 293
+P KR +++ S
Sbjct: 258 KDPKKRMTIQDS 269
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +V E + + L+ E +GGE+FD+L + E+EA +QI++ V Y H +I
Sbjct: 76 VITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 534 IHRDLKAEN-LLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
H DLK EN +LLD + IKI DFG +++ GN+ G+P + APE+
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 149/273 (54%), Gaps = 27/273 (9%)
Query: 41 DEPHIGKYKLL---KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVR 97
D P Y L K +G+G+F+ + H + + A+KII K + QK E+
Sbjct: 3 DSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM--EANTQK---EIT 57
Query: 98 IMKMLD-HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
+K+ + HPNIVKL +V + +LVME +GGE+F+ + E EA R++VS
Sbjct: 58 ALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS 117
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNK-LDTFCGSPPYAA 212
AV + H ++HRDLK ENLL E + IKI DFGF+ P N+ L T C + YAA
Sbjct: 118 AVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAA 177
Query: 213 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-------STLRELRERVLRGKYRIP 265
PEL YD D+WSLGVILYT++SG +PF ++ E+ +++ +G +
Sbjct: 178 PELLNQNGYD-ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE 236
Query: 266 FY----MSTDCENLLKKFLVLNPAKRASLEVSG 294
+S + ++L++ L ++P KR L++SG
Sbjct: 237 GEAWKNVSQEAKDLIQGLLTVDPNKR--LKMSG 267
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Query: 466 RASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 525
+ G ++KL +V + +LVME +GGE+F+ + E EA R++VSAV
Sbjct: 60 KLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAV 119
Query: 526 QYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPE 581
+ H ++HRDLK ENLL E + IKI DFGF+ P N+ L T C + YAAPE
Sbjct: 120 SHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPE 179
Query: 582 LF 583
L
Sbjct: 180 LL 181
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 133/258 (51%), Gaps = 4/258 (1%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK-TQLNPGSLQKLFREVRIM 99
D + + L +GKG+F KV L++ T + A+KI+ K + ++ E R++
Sbjct: 336 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 395
Query: 100 KMLDHPNIV-KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 158
+ P + +L +T LY VMEY +GG++ ++ GR KE A +I +
Sbjct: 396 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGL 455
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 217
+ K II+RDLK +N++LDSE +IKIADFG E G FCG+P Y APE+
Sbjct: 456 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA 515
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLK 277
+ Y G VD W+ GV+LY +++G PF+G EL + ++ P MS + + K
Sbjct: 516 YQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICK 574
Query: 278 KFLVLNPAKRASLEVSGE 295
+ +P KR GE
Sbjct: 575 GLMTKHPGKRLGCGPEGE 592
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L +L +T LY VMEY +GG++ ++ GR KE A +I + + K I
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 463
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPEL 582
I+RDLK +N++LDSE +IKIADFG E G FCG+P Y APE+
Sbjct: 464 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 513
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 132/242 (54%), Gaps = 9/242 (3%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQ 112
+GKG FAK T + A KI+ K+ L P +K+ E+ I + L H ++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 113 VIETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHR 169
E +++V+E + + LH R K E EAR RQIV QY H+ ++IHR
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLE---LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 139
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 228
DLK NL L+ ++ +KI DFG + + G + CG+P Y APE+ KK EVDV
Sbjct: 140 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVDV 198
Query: 229 WSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA 288
WS+G I+YTL+ G PF+ S L+E R+ + +Y IP +++ +L++K L +P R
Sbjct: 199 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 258
Query: 289 SL 290
++
Sbjct: 259 TI 260
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMK---EKEARAKFRQIVSAVQYCHQKKIIHRD 537
E +++V+E + + LH R K E EAR RQIV QY H+ ++IHRD
Sbjct: 84 FEDNDFVFVVLELCRRRSLLE---LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 538 LKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELF 583
LK NL L+ ++ +KI DFG + + G + CG+P Y APE+
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL 187
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 138/241 (57%), Gaps = 4/241 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK-TQLNPGSLQKLFREVRIMKMLDHPN 106
+++L+T+G G+F +V L + G+ A+K++ K + ++ E ++ ++ HP
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++++ + + ++++M+Y GGE+F L R A+ ++ A++Y H K I
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 127
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
I+RDLK EN+LLD +IKI DFGF+ ++ P CG+P Y APE+ K Y+ +
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFA-KYVPDVTY-XLCGTPDYIAPEVVSTKPYNK-SI 184
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
D WS G+++Y +++G PF S + E++L + R P + + D ++LL + + + ++
Sbjct: 185 DWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQ 244
Query: 287 R 287
R
Sbjct: 245 R 245
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++++ + + ++++M+Y GGE+F L R A+ ++ A++Y H K I
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 127
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+RDLK EN+LLD +IKI DFGF+ ++ P CG+P Y APE+
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFA-KYVPDVTY-XLCGTPDYIAPEV 174
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 133/258 (51%), Gaps = 4/258 (1%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK-TQLNPGSLQKLFREVRIM 99
D + + L +GKG+F KV L++ T + A+KI+ K + ++ E R++
Sbjct: 15 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 74
Query: 100 KMLDHPNIV-KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 158
+ P + +L +T LY VMEY +GG++ ++ GR KE A +I +
Sbjct: 75 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGL 134
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 217
+ K II+RDLK +N++LDSE +IKIADFG E G FCG+P Y APE+
Sbjct: 135 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA 194
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLK 277
+ Y G VD W+ GV+LY +++G PF+G EL + ++ P MS + + K
Sbjct: 195 YQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICK 253
Query: 278 KFLVLNPAKRASLEVSGE 295
+ +P KR GE
Sbjct: 254 GLMTKHPGKRLGCGPEGE 271
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L +L +T LY VMEY +GG++ ++ GR KE A +I + + K I
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 142
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPEL 582
I+RDLK +N++LDSE +IKIADFG E G FCG+P Y APE+
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 192
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 143/278 (51%), Gaps = 32/278 (11%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL---------------- 84
D + +Y L IGKG++ VKLA + A+K++ K +L
Sbjct: 8 DCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTR 67
Query: 85 -------NP-GSLQKLFREVRIMKMLDHPNIVKLFQVIE--TEKTLYLVMEYASGGEVFD 134
P G ++++++E+ I+K LDHPN+VKL +V++ E LY+V E + G V +
Sbjct: 68 PAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME 127
Query: 135 YLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 194
L + E +AR F+ ++ ++Y H +KIIHRD+K NLL+ + +IKIADFG SNE
Sbjct: 128 VPTLK-PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 195 FTPGNK-LDTFCGSPPYAAPELFQG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLR 251
F + L G+P + APE K + G +DVW++GV LY V G PF +
Sbjct: 187 FKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246
Query: 252 ELRERVLRGKYRIPFY--MSTDCENLLKKFLVLNPAKR 287
L ++ P ++ D ++L+ + L NP R
Sbjct: 247 CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESR 284
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 474 LLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL +V++ E LY+V E + G V + L + E +AR F+ ++ ++Y H +
Sbjct: 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQARFYFQDLIKGIEYLHYQ 156
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPE 581
KIIHRD+K NLL+ + +IKIADFG SNEF + L G+P + APE
Sbjct: 157 KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPE 207
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 140/258 (54%), Gaps = 33/258 (12%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLF 111
+ +G G F V L + +G E IK I+K + + ++++ E+ ++K LDHPNI+K+F
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIF 86
Query: 112 QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAK----------FRQIVSAVQYC 161
+V E +Y+VME GGE+ + R+ +AR K +Q+++A+ Y
Sbjct: 87 EVFEDYHNMYIVMETCEGGELLE------RIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 162 HQKKIIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 218
H + ++H+DLK EN+L IKI DFG + F G+ Y APE+F
Sbjct: 141 HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF-- 198
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE----- 273
K+ + D+WS GV++Y L++G LPF G++L E+++ + Y+ P Y + +C
Sbjct: 199 KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ---KATYKEPNY-AVECRPLTPQ 254
Query: 274 --NLLKKFLVLNPAKRAS 289
+LLK+ L +P +R S
Sbjct: 255 AVDLLKQMLTKDPERRPS 272
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 19/124 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAK----------FRQIVS 523
++K+F+V E +Y+VME GGE+ + R+ +AR K +Q+++
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLE------RIVSAQARGKALSEGYVAELMKQMMN 135
Query: 524 AVQYCHQKKIIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 580
A+ Y H + ++H+DLK EN+L IKI DFG + F G+ Y AP
Sbjct: 136 ALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAP 195
Query: 581 ELFQ 584
E+F+
Sbjct: 196 EVFK 199
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 127/243 (52%), Gaps = 4/243 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVR--IMKMLDHP 105
+ LK IGKG+F KV LA+H A+K++ K + +K R ++K + HP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
+V L +T LY V++Y +GGE+F +L E AR +I SA+ Y H
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQGKKYDGP 224
I++RDLK EN+LLDS+ +I + DFG E N TFCG+P Y APE+ + YD
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDR- 218
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNP 284
VD W LG +LY ++ G PF E+ + +L ++ ++ +LL+ L +
Sbjct: 219 TVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDR 278
Query: 285 AKR 287
KR
Sbjct: 279 TKR 281
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+ L +T LY V++Y +GGE+F +L E AR +I SA+ Y H I
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNI 160
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQ 584
++RDLK EN+LLDS+ +I + DFG E N TFCG+P Y APE+
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH 212
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 148/258 (57%), Gaps = 17/258 (6%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVP---TGKEVAIKIIDK-TQLNPGSLQKLFREVRIMK 100
I ++LLK +G G + KV L + + TGK A+K++ K T + + R R +
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER--Q 110
Query: 101 MLDH----PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
+L+H P +V L +TE L+L+++Y +GGE+F +L R E E + +IV
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVL 170
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG--NKLDTFCGSPPYAAPE 214
A+++ H+ II+RD+K EN+LLDS ++ + DFG S EF + FCG+ Y AP+
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 230
Query: 215 LFQGKKYDGPE-VDVWSLGVILYTLVSGSLPF--DG--STLRELRERVLRGKYRIPFYMS 269
+ +G + VD WSLGV++Y L++G+ PF DG ++ E+ R+L+ + P MS
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS 290
Query: 270 TDCENLLKKFLVLNPAKR 287
++L+++ L+ +P KR
Sbjct: 291 ALAKDLIQRLLMKDPKKR 308
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 70/115 (60%), Gaps = 2/115 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+ L +TE L+L+++Y +GGE+F +L R E E + +IV A+++ H+ I
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI 180
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPG--NKLDTFCGSPPYAAPELFQGG 586
I+RD+K EN+LLDS ++ + DFG S EF + FCG+ Y AP++ +GG
Sbjct: 181 IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG 235
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 135/243 (55%), Gaps = 11/243 (4%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVR-IMKMLDHPN 106
Y+++K IG+G F +V+L +H T K A+K++ K ++ S F E R IM + P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
+V+LF + ++ LY+VMEY GG++ + L+ + + EK AR ++V A+ H
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGF 194
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--KLDTFCGSPPYAAPELFQ---GKKY 221
IHRD+K +N+LLD ++K+ADFG + + DT G+P Y +PE+ + G Y
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLK 277
G E D WS+GV LY ++ G PF +L +++ K + F +S + +NL+
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLIC 314
Query: 278 KFL 280
FL
Sbjct: 315 AFL 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++LF + ++ LY+VMEY GG++ + L+ + + EK AR ++V A+ H
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGF 194
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--KLDTFCGSPPYAAPELF--QGG 586
IHRD+K +N+LLD ++K+ADFG + + DT G+P Y +PE+ QGG
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 251
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 135/243 (55%), Gaps = 11/243 (4%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVR-IMKMLDHPN 106
Y+++K IG+G F +V+L +H T K A+K++ K ++ S F E R IM + P
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 130
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
+V+LF + ++ LY+VMEY GG++ + L+ + + EK AR ++V A+ H
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGF 189
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--KLDTFCGSPPYAAPELFQ---GKKY 221
IHRD+K +N+LLD ++K+ADFG + + DT G+P Y +PE+ + G Y
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 249
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLK 277
G E D WS+GV LY ++ G PF +L +++ K + F +S + +NL+
Sbjct: 250 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLIC 309
Query: 278 KFL 280
FL
Sbjct: 310 AFL 312
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 71/124 (57%), Gaps = 5/124 (4%)
Query: 467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 526
A + +++LF + ++ LY+VMEY GG++ + L+ + + EK AR ++V A+
Sbjct: 124 AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALD 182
Query: 527 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--KLDTFCGSPPYAAPELF- 583
H IHRD+K +N+LLD ++K+ADFG + + DT G+P Y +PE+
Sbjct: 183 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 242
Query: 584 -QGG 586
QGG
Sbjct: 243 SQGG 246
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 135/243 (55%), Gaps = 11/243 (4%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVR-IMKMLDHPN 106
Y+++K IG+G F +V+L +H T K A+K++ K ++ S F E R IM + P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
+V+LF + ++ LY+VMEY GG++ + L+ + + EK AR ++V A+ H
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGF 194
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--KLDTFCGSPPYAAPELFQ---GKKY 221
IHRD+K +N+LLD ++K+ADFG + + DT G+P Y +PE+ + G Y
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLK 277
G E D WS+GV LY ++ G PF +L +++ K + F +S + +NL+
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLIC 314
Query: 278 KFL 280
FL
Sbjct: 315 AFL 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++LF + ++ LY+VMEY GG++ + L+ + + EK AR ++V A+ H
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGF 194
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--KLDTFCGSPPYAAPELF--QGG 586
IHRD+K +N+LLD ++K+ADFG + + DT G+P Y +PE+ QGG
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 251
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 140/251 (55%), Gaps = 11/251 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY L+ IG+G+F K L K G++ IK I+ ++++ ++ REV ++ + HPN
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYL-----VLHGRMKEKEARAKFRQIVSAVQYC 161
IV+ + E +LY+VM+Y GG++F + VL +E + F QI A+++
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL---FQEDQILDWFVQICLALKHV 141
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFC-GSPPYAAPELFQGKK 220
H +KI+HRD+K++N+ L + +++ DFG + +L C G+P Y +PE+ + K
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKP 201
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCENLLKKF 279
Y+ + D+W+LG +LY L + F+ +++ L +++ G + + + S D +L+ +
Sbjct: 202 YNN-KSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQL 260
Query: 280 LVLNPAKRASL 290
NP R S+
Sbjct: 261 FKRNPRDRPSV 271
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 9/108 (8%)
Query: 481 IETEKTLYLVMEYASGGEVFDYL-----VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
E +LY+VM+Y GG++F + VL +E + F QI A+++ H +KI+H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVL---FQEDQILDWFVQICLALKHVHDRKILH 148
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFC-GSPPYAAPEL 582
RD+K++N+ L + +++ DFG + +L C G+P Y +PE+
Sbjct: 149 RDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI 196
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 139/255 (54%), Gaps = 20/255 (7%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIM-KMLDHPN 106
Y++ + IG G+++ K H T E A+KIIDK++ +P E+ I+ + HPN
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE------EIEILLRYGQHPN 77
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I+ L V + K +Y+V E GGE+ D ++ E+EA A I V+Y H + +
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 167 IHRDLKAENLLLDSEM----NIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQGKKY 221
+HRDLK N+L E +I+I DFGF+ + N L T C + + APE+ + + Y
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGY 197
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDG---STLRELRERVLRGKYRIP--FY--MSTDCEN 274
D D+WSLGV+LYT+++G PF T E+ R+ GK+ + ++ +S ++
Sbjct: 198 DAA-CDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 275 LLKKFLVLNPAKRAS 289
L+ K L ++P +R +
Sbjct: 257 LVSKMLHVDPHQRLT 271
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L V + K +Y+V E GGE+ D ++ E+EA A I V+Y H + +
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 534 IHRDLKAENLLLDSEM----NIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQ 584
+HRDLK N+L E +I+I DFGF+ + N L T C + + APE+ +
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLE 193
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 138/255 (54%), Gaps = 20/255 (7%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIM-KMLDHPN 106
Y++ + IG G+++ K H T E A+KIIDK++ +P E+ I+ + HPN
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTE------EIEILLRYGQHPN 77
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I+ L V + K +Y+V E GGE+ D ++ E+EA A I V+Y H + +
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 167 IHRDLKAENLLLDSEM----NIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQGKKY 221
+HRDLK N+L E +I+I DFGF+ + N L T C + + APE+ + + Y
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGY 197
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDG---STLRELRERVLRGKYRIP--FY--MSTDCEN 274
D D+WSLGV+LYT ++G PF T E+ R+ GK+ + ++ +S ++
Sbjct: 198 DAA-CDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 275 LLKKFLVLNPAKRAS 289
L+ K L ++P +R +
Sbjct: 257 LVSKXLHVDPHQRLT 271
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L V + K +Y+V E GGE+ D ++ E+EA A I V+Y H + +
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 534 IHRDLKAENLLLDSEM----NIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQ 584
+HRDLK N+L E +I+I DFGF+ + N L T C + + APE+ +
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLE 193
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 134/243 (55%), Gaps = 11/243 (4%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVR-IMKMLDHPN 106
Y ++K IG+G F +V+L +H + K A+K++ K ++ S F E R IM + P
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
+V+LF + +K LY+VMEY GG++ + L+ + + EK A+ ++V A+ H +
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMGL 195
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEF--TPGNKLDTFCGSPPYAAPELFQ---GKKY 221
IHRD+K +N+LLD ++K+ADFG + T DT G+P Y +PE+ + G Y
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGY 255
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLK 277
G E D WS+GV L+ ++ G PF +L +++ K + F +S +NL+
Sbjct: 256 YGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLIC 315
Query: 278 KFL 280
FL
Sbjct: 316 AFL 318
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 5/117 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++LF + +K LY+VMEY GG++ + L+ + + EK A+ ++V A+ H +
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMGL 195
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEF--TPGNKLDTFCGSPPYAAPELF--QGG 586
IHRD+K +N+LLD ++K+ADFG + T DT G+P Y +PE+ QGG
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGG 252
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 136/255 (53%), Gaps = 20/255 (7%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIM-KMLDHPN 106
Y + +TIG G++++ K H T E A+K+IDK++ +P E+ I+ + HPN
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS------EEIEILLRYGQHPN 82
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I+ L V + K +YLV E GGE+ D ++ E+EA I V+Y H + +
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 167 IHRDLKAENLLLDSEMN----IKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQGKKY 221
+HRDLK N+L E ++I DFGF+ + N L T C + + APE+ + + Y
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGY 202
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFD---GSTLRELRERVLRGKYRIPF----YMSTDCEN 274
D D+WSLG++LYT+++G PF T E+ R+ GK+ + +S ++
Sbjct: 203 D-EGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 275 LLKKFLVLNPAKRAS 289
L+ K L ++P +R +
Sbjct: 262 LVSKMLHVDPHQRLT 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 450 RGVHRSISASNA-----KPSRRASSGGETLLKLFQ---------VIETEKTLYLVMEYAS 495
R VH++ + A K R S E LL+ Q V + K +YLV E
Sbjct: 45 RCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMR 104
Query: 496 GGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN----I 551
GGE+ D ++ E+EA I V+Y H + ++HRDLK N+L E +
Sbjct: 105 GGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECL 164
Query: 552 KIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQ 584
+I DFGF+ + N L T C + + APE+ +
Sbjct: 165 RICDFGFAKQLRAENGLLMTPCYTANFVAPEVLK 198
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 138/248 (55%), Gaps = 6/248 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQ-LNPGSLQKLFREVRIMKMLDHPN 106
+++L+ IGKG+F KV + + T K A+K ++K + + ++ +F+E++IM+ L+HP
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
+V L+ + E+ +++V++ GG++ +L + KE+ + ++V A+ Y ++I
Sbjct: 77 LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRI 136
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE- 225
IHRD+K +N+LLD ++ I DF + ++ T G+ PY APE+F +K G
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSF 196
Query: 226 -VDVWSLGVILYTLVSGSLPF---DGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLV 281
VD WSLGV Y L+ G P+ ++ +E+ P S + +LLKK L
Sbjct: 197 AVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLE 256
Query: 282 LNPAKRAS 289
NP +R S
Sbjct: 257 PNPDQRFS 264
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+ L+ + E+ +++V++ GG++ +L + KE+ + ++V A+ Y ++I
Sbjct: 77 LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRI 136
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSG 593
IHRD+K +N+LLD ++ I DF + ++ T G+ PY APE+F +S
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMF------SSRK 190
Query: 594 GAG 596
GAG
Sbjct: 191 GAG 193
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 136/255 (53%), Gaps = 20/255 (7%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIM-KMLDHPN 106
Y + +TIG G++++ K H T E A+K+IDK++ +P E+ I+ + HPN
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS------EEIEILLRYGQHPN 82
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I+ L V + K +YLV E GGE+ D ++ E+EA I V+Y H + +
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 167 IHRDLKAENLLLDSEMN----IKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQGKKY 221
+HRDLK N+L E ++I DFGF+ + N L T C + + APE+ + + Y
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGY 202
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFD---GSTLRELRERVLRGKYRIPF----YMSTDCEN 274
D D+WSLG++LYT+++G PF T E+ R+ GK+ + +S ++
Sbjct: 203 D-EGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 275 LLKKFLVLNPAKRAS 289
L+ K L ++P +R +
Sbjct: 262 LVSKMLHVDPHQRLT 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 450 RGVHRSISASNA-----KPSRRASSGGETLLKLFQ---------VIETEKTLYLVMEYAS 495
R VH++ + A K R S E LL+ Q V + K +YLV E
Sbjct: 45 RCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMR 104
Query: 496 GGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN----I 551
GGE+ D ++ E+EA I V+Y H + ++HRDLK N+L E +
Sbjct: 105 GGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECL 164
Query: 552 KIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQ 584
+I DFGF+ + N L T C + + APE+ +
Sbjct: 165 RICDFGFAKQLRAENGLLMTPCYTANFVAPEVLK 198
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 133/254 (52%), Gaps = 22/254 (8%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY + IG+G V A V TG+EVAI+ ++ Q L + E+ +M+ +PN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPN 78
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV L++VMEY +GG + D +V M E + A R+ + A+++ H ++
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPELFQGKKYDGPE 225
IHRD+K++N+LL + ++K+ DFGF + TP +K T G+P + APE+ K Y GP+
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY-GPK 196
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI----------PFYMSTDCENL 275
VD+WSLG++ ++ G P+ L E LR Y I P +S +
Sbjct: 197 VDIWSLGIMAIEMIEGEPPY-------LNENPLRALYLIATNGTPELQNPEKLSAIFRDF 249
Query: 276 LKKFLVLNPAKRAS 289
L + L ++ KR S
Sbjct: 250 LNRCLDMDVEKRGS 263
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
L++VMEY +GG + D +V M E + A R+ + A+++ H ++IHRD+K++N+LL
Sbjct: 92 LWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 150
Query: 547 SEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPEL 582
+ ++K+ DFGF + TP +K T G+P + APE+
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 129/267 (48%), Gaps = 53/267 (19%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
KY L IG+G++ V++A T AIKI++K Q+NP ++++ EVR+MK L
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL--------------------------- 136
HPNI +L++V E E+ + LVME GG + D L
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 137 ------VLHG-------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL--DSE 181
+HG +EK RQI SA+ Y H + I HRD+K EN L +
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS 206
Query: 182 MNIKIADFGFSNEFTPGNK-----LDTFCGSPPYAAPELFQ--GKKYDGPEVDVWSLGVI 234
IK+ DFG S EF N + T G+P + APE+ + Y GP+ D WS GV+
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESY-GPKCDAWSAGVL 265
Query: 235 LYTLVSGSLPFDGSTLRELRERVLRGK 261
L+ L+ G++PF G + +VL K
Sbjct: 266 LHLLLMGAVPFPGVNDADTISQVLNKK 292
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 63/155 (40%), Gaps = 47/155 (30%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFDYL-------------------------------- 503
+L++V E E+ + LVME GG + D L
Sbjct: 92 RLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAIN 151
Query: 504 -VLHG-------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL--DSEMNIKI 553
+HG +EK RQI SA+ Y H + I HRD+K EN L + IK+
Sbjct: 152 GSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKL 211
Query: 554 ADFGFSNEFTPGNK-----LDTFCGSPPYAAPELF 583
DFG S EF N + T G+P + APE+
Sbjct: 212 VDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL 246
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 134/258 (51%), Gaps = 16/258 (6%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y++L TIG G++ + + + GK + K +D + Q L EV +++ L HPNI
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 108 VKLFQVI--ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-----RQIVSAVQY 160
V+ + I T TLY+VMEY GG++ ++ G + + +F Q+ A++
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 161 CHQKK-----IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-DTFCGSPPYAAPE 214
CH++ ++HRDLK N+ LD + N+K+ DFG + TF G+P Y +PE
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPE 186
Query: 215 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCE 273
Y+ + D+WSLG +LY L + PF + +EL ++ GK+ RIP+ S +
Sbjct: 187 QMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELN 245
Query: 274 NLLKKFLVLNPAKRASLE 291
++ + L L R S+E
Sbjct: 246 EIITRMLNLKDYHRPSVE 263
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 483 TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-----RQIVSAVQYCHQKK----- 532
T TLY+VMEY GG++ ++ G + + +F Q+ A++ CH++
Sbjct: 78 TNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-DTFCGSPPYAAPE 581
++HRDLK N+ LD + N+K+ DFG + TF G+P Y +PE
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPE 186
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 132/254 (51%), Gaps = 22/254 (8%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY + IG+G V A V TG+EVAI+ ++ Q L + E+ +M+ +PN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPN 78
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV L++VMEY +GG + D +V M E + A R+ + A+++ H ++
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPELFQGKKYDGPE 225
IHRD+K++N+LL + ++K+ DFGF + TP +K G+P + APE+ K Y GP+
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY-GPK 196
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI----------PFYMSTDCENL 275
VD+WSLG++ ++ G P+ L E LR Y I P +S +
Sbjct: 197 VDIWSLGIMAIEMIEGEPPY-------LNENPLRALYLIATNGTPELQNPEKLSAIFRDF 249
Query: 276 LKKFLVLNPAKRAS 289
L + L ++ KR S
Sbjct: 250 LNRCLEMDVEKRGS 263
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
L++VMEY +GG + D +V M E + A R+ + A+++ H ++IHRD+K++N+LL
Sbjct: 92 LWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 150
Query: 547 SEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPEL 582
+ ++K+ DFGF + TP +K G+P + APE+
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEV 187
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 132/254 (51%), Gaps = 22/254 (8%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY + IG+G V A V TG+EVAI+ ++ Q L + E+ +M+ +PN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPN 78
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV L++VMEY +GG + D +V M E + A R+ + A+++ H ++
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPELFQGKKYDGPE 225
IHRD+K++N+LL + ++K+ DFGF + TP +K G+P + APE+ K Y GP+
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAY-GPK 196
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI----------PFYMSTDCENL 275
VD+WSLG++ ++ G P+ L E LR Y I P +S +
Sbjct: 197 VDIWSLGIMAIEMIEGEPPY-------LNENPLRALYLIATNGTPELQNPEKLSAIFRDF 249
Query: 276 LKKFLVLNPAKRAS 289
L + L ++ KR S
Sbjct: 250 LNRCLDMDVEKRGS 263
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
L++VMEY +GG + D +V M E + A R+ + A+++ H ++IHRD+K++N+LL
Sbjct: 92 LWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 150
Query: 547 SEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPEL 582
+ ++K+ DFGF + TP +K G+P + APE+
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEV 187
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 132/254 (51%), Gaps = 22/254 (8%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY + IG+G V A V TG+EVAI+ ++ Q L + E+ +M+ +PN
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPN 79
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV L++VMEY +GG + D +V M E + A R+ + A+++ H ++
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPELFQGKKYDGPE 225
IHRD+K++N+LL + ++K+ DFGF + TP +K G+P + APE+ K Y GP+
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY-GPK 197
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI----------PFYMSTDCENL 275
VD+WSLG++ ++ G P+ L E LR Y I P +S +
Sbjct: 198 VDIWSLGIMAIEMIEGEPPY-------LNENPLRALYLIATNGTPELQNPEKLSAIFRDF 250
Query: 276 LKKFLVLNPAKRAS 289
L + L ++ KR S
Sbjct: 251 LNRCLEMDVEKRGS 264
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
L++VMEY +GG + D +V M E + A R+ + A+++ H ++IHRD+K++N+LL
Sbjct: 93 LWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 151
Query: 547 SEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPEL 582
+ ++K+ DFGF + TP +K G+P + APE+
Sbjct: 152 MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEV 188
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 133/254 (52%), Gaps = 22/254 (8%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY + IG+G V A V TG+EVAI+ ++ Q L + E+ +M+ +PN
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPN 79
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV L++VMEY +GG + D +V M E + A R+ + A+++ H ++
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPELFQGKKYDGPE 225
IHR++K++N+LL + ++K+ DFGF + TP +K T G+P + APE+ K Y GP+
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY-GPK 197
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI----------PFYMSTDCENL 275
VD+WSLG++ ++ G P+ L E LR Y I P +S +
Sbjct: 198 VDIWSLGIMAIEMIEGEPPY-------LNENPLRALYLIATNGTPELQNPEKLSAIFRDF 250
Query: 276 LKKFLVLNPAKRAS 289
L + L ++ KR S
Sbjct: 251 LNRCLEMDVEKRGS 264
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
L++VMEY +GG + D +V M E + A R+ + A+++ H ++IHR++K++N+LL
Sbjct: 93 LWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLG 151
Query: 547 SEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPEL 582
+ ++K+ DFGF + TP +K T G+P + APE+
Sbjct: 152 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 188
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 131/255 (51%), Gaps = 17/255 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL---NPGSLQ-KLFREVRIMKML 102
+Y+L +GKG F V + +VAIK+I + ++ +P S EV ++ +
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 103 D----HPNIVKLFQVIETEKTLYLVMEYA-SGGEVFDYLVLHGRMKEKEARAKFRQIVSA 157
HP +++L ET++ LV+E ++FDY+ G + E +R F Q+V+A
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 158 VQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+Q+CH + ++HRD+K EN+L+D K+ DFG S F G+ Y+ PE
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPYTDFDGTRVYSPPEWI 210
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
+Y VWSLG++LY +V G +PF E + +L + P ++S DC L+
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPF------ERDQEILEAELHFPAHVSPDCCALI 264
Query: 277 KKFLVLNPAKRASLE 291
++ L P+ R SLE
Sbjct: 265 RRCLAPKPSSRPSLE 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 467 ASSGGETLLKLFQVIETEKTLYLVMEYA-SGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 525
A G +++L ET++ LV+E ++FDY+ G + E +R F Q+V+A+
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
Q+CH + ++HRD+K EN+L+D K+ DFG S F G+ Y+ PE
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPYTDFDGTRVYSPPE 208
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 135/257 (52%), Gaps = 13/257 (5%)
Query: 45 IGKYKLLKTIGKGNFAKVK--LAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML 102
IGKY + +G+G++ KVK L + V I K + P + +E+++++ L
Sbjct: 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL 63
Query: 103 DHPNIVKLFQVI--ETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAV 158
H N+++L V+ E ++ +Y+VMEY G E+ D V R +A F Q++ +
Sbjct: 64 RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDS-VPEKRFPVCQAHGYFCQLIDGL 122
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFC----GSPPYAAPE 214
+Y H + I+H+D+K NLLL + +KI+ G + P DT C GSP + PE
Sbjct: 123 EYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDT-CRTSQGSPAFQPPE 181
Query: 215 LFQG-KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
+ G + G +VD+WS GV LY + +G PF+G + +L E + +G Y IP
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS 241
Query: 274 NLLKKFLVLNPAKRASL 290
+LLK L PAKR S+
Sbjct: 242 DLLKGMLEYEPAKRFSI 258
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 10/120 (8%)
Query: 474 LLKLFQVI--ETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 529
+++L V+ E ++ +Y+VMEY G E+ D V R +A F Q++ ++Y H
Sbjct: 68 VIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDS-VPEKRFPVCQAHGYFCQLIDGLEYLH 126
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFC----GSPPYAAPELFQG 585
+ I+H+D+K NLLL + +KI+ G + P DT C GSP + PE+ G
Sbjct: 127 SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDT-CRTSQGSPAFQPPEIANG 185
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 133/258 (51%), Gaps = 16/258 (6%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y++L TIG G++ + + + GK + K +D + Q L EV +++ L HPNI
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 108 VKLFQVI--ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-----RQIVSAVQY 160
V+ + I T TLY+VMEY GG++ ++ G + + +F Q+ A++
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 161 CHQKK-----IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-DTFCGSPPYAAPE 214
CH++ ++HRDLK N+ LD + N+K+ DFG + F G+P Y +PE
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPE 186
Query: 215 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCE 273
Y+ + D+WSLG +LY L + PF + +EL ++ GK+ RIP+ S +
Sbjct: 187 QMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELN 245
Query: 274 NLLKKFLVLNPAKRASLE 291
++ + L L R S+E
Sbjct: 246 EIITRMLNLKDYHRPSVE 263
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 483 TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-----RQIVSAVQYCHQKK----- 532
T TLY+VMEY GG++ ++ G + + +F Q+ A++ CH++
Sbjct: 78 TNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-DTFCGSPPYAAPE 581
++HRDLK N+ LD + N+K+ DFG + F G+P Y +PE
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPE 186
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 133/258 (51%), Gaps = 16/258 (6%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y++L TIG G++ + + + GK + K +D + Q L EV +++ L HPNI
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 108 VKLFQVI--ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-----RQIVSAVQY 160
V+ + I T TLY+VMEY GG++ ++ G + + +F Q+ A++
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 161 CHQKK-----IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-DTFCGSPPYAAPE 214
CH++ ++HRDLK N+ LD + N+K+ DFG + F G+P Y +PE
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPE 186
Query: 215 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCE 273
Y+ + D+WSLG +LY L + PF + +EL ++ GK+ RIP+ S +
Sbjct: 187 QMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELN 245
Query: 274 NLLKKFLVLNPAKRASLE 291
++ + L L R S+E
Sbjct: 246 EIITRMLNLKDYHRPSVE 263
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 483 TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-----RQIVSAVQYCHQKK----- 532
T TLY+VMEY GG++ ++ G + + +F Q+ A++ CH++
Sbjct: 78 TNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-DTFCGSPPYAAPE 581
++HRDLK N+ LD + N+K+ DFG + F G+P Y +PE
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPE 186
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 140/279 (50%), Gaps = 40/279 (14%)
Query: 48 YKLL-KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HP 105
YKL + +G+G +AKV+ A + GKE A+KII+K + S ++FREV + +
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGH--SRSRVFREVETLYQCQGNK 71
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
NI++L + E + YLV E GG + ++ E+EA R + +A+ + H K
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG 131
Query: 166 IIHRDLKAENLLLDSEMN---IKIADFG------FSNEFTPGN--KLDTFCGSPPYAAPE 214
I HRDLK EN+L +S +KI DF +N TP +L T CGS Y APE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 215 LF-----QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS---------------TLRELR 254
+ Q YD D+WSLGV+LY ++SG PF G +L
Sbjct: 192 VVEVFTDQATFYD-KRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF 250
Query: 255 ERVLRGKYRIP----FYMSTDCENLLKKFLVLNPAKRAS 289
E + GKY P ++S++ ++L+ K LV + +R S
Sbjct: 251 ESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLS 289
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 468 SSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
G + +L+L + E + YLV E GG + ++ E+EA R + +A+ +
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDF 126
Query: 528 CHQKKIIHRDLKAENLLLDSEMN---IKIADFG------FSNEFTPGN--KLDTFCGSPP 576
H K I HRDLK EN+L +S +KI DF +N TP +L T CGS
Sbjct: 127 LHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 577 YAAPELFQ 584
Y APE+ +
Sbjct: 187 YMAPEVVE 194
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 121/231 (52%), Gaps = 8/231 (3%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVR-IMKML 102
H +++LK IG+G F +V + K K A+KI++K ++ + FRE R ++
Sbjct: 72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG 131
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYC 161
D I L + + LYLVM+Y GG++ L R+ E+ AR ++V A+
Sbjct: 132 DSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV 191
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT--FCGSPPYAAPELFQ-- 217
HQ +HRD+K +N+L+D +I++ADFG + + + G+P Y +PE+ Q
Sbjct: 192 HQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM 251
Query: 218 --GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF 266
GK GPE D WSLGV +Y ++ G PF +L E +++ K R F
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF 302
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
L + + LYLVM+Y GG++ L R+ E+ AR ++V A+ HQ +H
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT--FCGSPPYAAPELFQGGAPVTSSG 593
RD+K +N+L+D +I++ADFG + + + G+P Y +PE+ Q G
Sbjct: 199 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA-----MEG 253
Query: 594 GAG 596
G G
Sbjct: 254 GKG 256
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 126/251 (50%), Gaps = 8/251 (3%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLF 111
+ +G G F +V + TG ++A KII + +++ E+ +M LDH N+++L+
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK--EEVKNEISVMNQLDHANLIQLY 152
Query: 112 QVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRD 170
E++ + LVMEY GGE+FD ++ + E + +QI +++ HQ I+H D
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 171 LKAENLLL---DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 227
LK EN+L D++ IKI DFG + + P KL G+P + APE+ P D
Sbjct: 213 LKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFP-TD 270
Query: 228 VWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKR 287
+WS+GVI Y L+SG PF G E +L ++ + D K+F+ K
Sbjct: 271 MWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKE 330
Query: 288 ASLEVSGEVTL 298
S +S L
Sbjct: 331 KSWRISASEAL 341
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKK 532
L++L+ E++ + LVMEY GGE+FD ++ + E + +QI +++ HQ
Sbjct: 148 LIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY 207
Query: 533 IIHRDLKAENLLL---DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+H DLK EN+L D++ IKI DFG + + P KL G+P + APE+
Sbjct: 208 ILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVNFGTPEFLAPEV 259
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 136/246 (55%), Gaps = 20/246 (8%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
IG+G+ V +A +GK VA+K +D + L LF EV IM+ H N+V+++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 216
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 173
L++VME+ GG + D +V H RM E++ A ++ A+ H + +IHRD+K+
Sbjct: 217 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 275
Query: 174 ENLLLDSEMNIKIADFGFSNEFT---PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 230
+++LL + +K++DFGF + + P K G+P + APEL Y GPEVD+WS
Sbjct: 276 DSILLTHDGRVKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELISRLPY-GPEVDIWS 332
Query: 231 LGVILYTLVSGSLPFDGS----TLRELRERV---LRGKYRIPFYMSTDCENLLKKFLVLN 283
LG+++ +V G P+ ++ +R+ + L+ +++ S + L + LV +
Sbjct: 333 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV----SPSLKGFLDRLLVRD 388
Query: 284 PAKRAS 289
PA+RA+
Sbjct: 389 PAQRAT 394
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
E +++++ L++VME+ GG + D +V H RM E++ A ++ A+ H +
Sbjct: 208 ENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQ 266
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT---PGNKLDTFCGSPPYAAPELF 583
+IHRD+K++++LL + +K++DFGF + + P K G+P + APEL
Sbjct: 267 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELI 319
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 136/246 (55%), Gaps = 20/246 (8%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
IG+G+ V +A +GK VA+K +D + L LF EV IM+ H N+V+++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 96
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 173
L++VME+ GG + D +V H RM E++ A ++ A+ H + +IHRD+K+
Sbjct: 97 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 155
Query: 174 ENLLLDSEMNIKIADFGFSNEFT---PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 230
+++LL + +K++DFGF + + P K G+P + APEL Y GPEVD+WS
Sbjct: 156 DSILLTHDGRVKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELISRLPY-GPEVDIWS 212
Query: 231 LGVILYTLVSGSLPFDGS----TLRELRERV---LRGKYRIPFYMSTDCENLLKKFLVLN 283
LG+++ +V G P+ ++ +R+ + L+ +++ S + L + LV +
Sbjct: 213 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV----SPSLKGFLDRLLVRD 268
Query: 284 PAKRAS 289
PA+RA+
Sbjct: 269 PAQRAT 274
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
E +++++ L++VME+ GG + D +V H RM E++ A ++ A+ H +
Sbjct: 88 ENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQ 146
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT---PGNKLDTFCGSPPYAAPELF 583
+IHRD+K++++LL + +K++DFGF + + P K G+P + APEL
Sbjct: 147 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELI 199
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 136/246 (55%), Gaps = 20/246 (8%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
IG+G+ V +A +GK VA+K +D + L LF EV IM+ H N+V+++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 139
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 173
L++VME+ GG + D +V H RM E++ A ++ A+ H + +IHRD+K+
Sbjct: 140 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 198
Query: 174 ENLLLDSEMNIKIADFGFSNEFT---PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 230
+++LL + +K++DFGF + + P K G+P + APEL Y GPEVD+WS
Sbjct: 199 DSILLTHDGRVKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELISRLPY-GPEVDIWS 255
Query: 231 LGVILYTLVSGSLPFDGS----TLRELRERV---LRGKYRIPFYMSTDCENLLKKFLVLN 283
LG+++ +V G P+ ++ +R+ + L+ +++ S + L + LV +
Sbjct: 256 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV----SPSLKGFLDRLLVRD 311
Query: 284 PAKRAS 289
PA+RA+
Sbjct: 312 PAQRAT 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
E +++++ L++VME+ GG + D +V H RM E++ A ++ A+ H +
Sbjct: 131 ENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQ 189
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT---PGNKLDTFCGSPPYAAPELF 583
+IHRD+K++++LL + +K++DFGF + + P K G+P + APEL
Sbjct: 190 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELI 242
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 148/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 80 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 139
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 198
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S++C+
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQ 252
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 253 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 300
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 200
Query: 583 FQ 584
+
Sbjct: 201 IR 202
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 136/246 (55%), Gaps = 20/246 (8%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
IG+G+ V +A +GK VA+K +D + L LF EV IM+ H N+V+++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 89
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 173
L++VME+ GG + D +V H RM E++ A ++ A+ H + +IHRD+K+
Sbjct: 90 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 148
Query: 174 ENLLLDSEMNIKIADFGFSNEFT---PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 230
+++LL + +K++DFGF + + P K G+P + APEL Y GPEVD+WS
Sbjct: 149 DSILLTHDGRVKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELISRLPY-GPEVDIWS 205
Query: 231 LGVILYTLVSGSLPFDGS----TLRELRERV---LRGKYRIPFYMSTDCENLLKKFLVLN 283
LG+++ +V G P+ ++ +R+ + L+ +++ S + L + LV +
Sbjct: 206 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV----SPSLKGFLDRLLVRD 261
Query: 284 PAKRAS 289
PA+RA+
Sbjct: 262 PAQRAT 267
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
E +++++ L++VME+ GG + D +V H RM E++ A ++ A+ H +
Sbjct: 81 ENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQ 139
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT---PGNKLDTFCGSPPYAAPELF 583
+IHRD+K++++LL + +K++DFGF + + P K G+P + APEL
Sbjct: 140 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELI 192
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 148/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 79 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 138
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 139 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 197
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S++C+
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQ 251
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 252 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 199
Query: 583 FQ 584
+
Sbjct: 200 IR 201
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 136/246 (55%), Gaps = 20/246 (8%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
IG+G+ V +A +GK VA+K +D + L LF EV IM+ H N+V+++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 94
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 173
L++VME+ GG + D +V H RM E++ A ++ A+ H + +IHRD+K+
Sbjct: 95 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 153
Query: 174 ENLLLDSEMNIKIADFGFSNEFT---PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 230
+++LL + +K++DFGF + + P K G+P + APEL Y GPEVD+WS
Sbjct: 154 DSILLTHDGRVKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELISRLPY-GPEVDIWS 210
Query: 231 LGVILYTLVSGSLPFDGS----TLRELRERV---LRGKYRIPFYMSTDCENLLKKFLVLN 283
LG+++ +V G P+ ++ +R+ + L+ +++ S + L + LV +
Sbjct: 211 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV----SPSLKGFLDRLLVRD 266
Query: 284 PAKRAS 289
PA+RA+
Sbjct: 267 PAQRAT 272
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
E +++++ L++VME+ GG + D +V H RM E++ A ++ A+ H +
Sbjct: 86 ENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQ 144
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT---PGNKLDTFCGSPPYAAPELF 583
+IHRD+K++++LL + +K++DFGF + + P K G+P + APEL
Sbjct: 145 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELI 197
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 148/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 210
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S++C+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQ 264
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 312
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 212
Query: 583 FQ 584
+
Sbjct: 213 IR 214
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 148/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 107 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 166
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 225
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S++C+
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQ 279
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 227
Query: 583 FQ 584
+
Sbjct: 228 IR 229
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 148/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 99 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 158
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 159 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 217
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S++C+
Sbjct: 218 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQ 271
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 272 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 319
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 160
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 161 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 219
Query: 583 FQ 584
+
Sbjct: 220 IR 221
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 148/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 183
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S++C+
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQ 237
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 238 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 185
Query: 583 FQ 584
+
Sbjct: 186 IR 187
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 136/246 (55%), Gaps = 20/246 (8%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
IG+G+ V +A +GK VA+K +D + L LF EV IM+ H N+V+++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 85
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 173
L++VME+ GG + D +V H RM E++ A ++ A+ H + +IHRD+K+
Sbjct: 86 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 144
Query: 174 ENLLLDSEMNIKIADFGFSNEFT---PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 230
+++LL + +K++DFGF + + P K G+P + APEL Y GPEVD+WS
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELISRLPY-GPEVDIWS 201
Query: 231 LGVILYTLVSGSLPFDGS----TLRELRERV---LRGKYRIPFYMSTDCENLLKKFLVLN 283
LG+++ +V G P+ ++ +R+ + L+ +++ S + L + LV +
Sbjct: 202 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV----SPSLKGFLDRLLVRD 257
Query: 284 PAKRAS 289
PA+RA+
Sbjct: 258 PAQRAT 263
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
E +++++ L++VME+ GG + D +V H RM E++ A ++ A+ H +
Sbjct: 77 ENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQ 135
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT---PGNKLDTFCGSPPYAAPELF 583
+IHRD+K++++LL + +K++DFGF + + P K G+P + APEL
Sbjct: 136 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELI 188
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 148/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 64 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 123
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 182
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S++C+
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQ 236
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 237 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 284
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 184
Query: 583 FQ 584
+
Sbjct: 185 IR 186
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 148/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 64 LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV 123
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 182
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S++C+
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQ 236
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 237 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 284
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 184
Query: 583 FQ 584
+
Sbjct: 185 IR 186
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 148/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 183
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S++C+
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQ 237
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 238 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 185
Query: 583 FQ 584
+
Sbjct: 186 IR 187
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 148/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 183
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S++C+
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQ 237
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 238 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 185
Query: 583 FQ 584
+
Sbjct: 186 IR 187
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 147/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 79 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 138
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 139 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 197
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S +C+
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXECQ 251
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 252 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 199
Query: 583 FQ 584
+
Sbjct: 200 IR 201
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 147/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 80 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 139
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 198
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S +C+
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXECQ 252
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 253 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 200
Query: 583 FQ 584
+
Sbjct: 201 IR 202
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 147/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 52 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 111
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 112 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 171
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 172 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 230
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S +C+
Sbjct: 231 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXECQ 284
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 285 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 332
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 173
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 174 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 232
Query: 583 FQ 584
+
Sbjct: 233 IR 234
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 115/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ S + D L G + ++ Q++ + +CH +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK ENLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 187 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ S + D L G + ++ Q++ + +CH
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 125
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK ENLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 126 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 115/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ S + D L G + ++ Q++ + +CH +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK ENLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 185 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ S + D L G + ++ Q++ + +CH
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 123
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK ENLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 134/270 (49%), Gaps = 17/270 (6%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK--LFREVRIMKML 102
+ Y + + +G G F V TG A K + + P K + +E++ M +L
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV----MTPHESDKETVRKEIQTMSVL 211
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYC 161
HP +V L E + + ++ E+ SGGE+F+ + H +M E EA RQ+ + +
Sbjct: 212 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 162 HQKKIIHRDLKAENLLLDSEMN--IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
H+ +H DLK EN++ ++ + +K+ DFG + P + G+ +AAPE+ +GK
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 331
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF----DGSTLRELRERVLRGKYRIPFYMSTDCENL 275
G D+WS+GV+ Y L+SG PF D TLR ++ +S D ++
Sbjct: 332 PV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 390
Query: 276 LKKFLVLNPAKRASLEVSGE---VTLGGAP 302
++K L+ +P R ++ + E +T G AP
Sbjct: 391 IRKLLLADPNTRMTIHQALEHPWLTPGNAP 420
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 473 TLLKLFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYCHQK 531
TL+ L E + + ++ E+ SGGE+F+ + H +M E EA RQ+ + + H+
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 532 KIIHRDLKAENLLLDSEMN--IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+H DLK EN++ ++ + +K+ DFG + P + G+ +AAPE+ +G
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG 330
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 147/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 107 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 166
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 225
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S +C+
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXECQ 279
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 227
Query: 583 FQ 584
+
Sbjct: 228 IR 229
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 132/243 (54%), Gaps = 14/243 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
IG+G+ V +A TGK+VA+K +D + L LF EV IM+ H N+V ++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRREL--LFNEVVIMRDYHHDNVVDMYSS 110
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 173
L++VME+ GG + D +V H RM E++ ++ A+ Y H + +IHRD+K+
Sbjct: 111 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKS 169
Query: 174 ENLLLDSEMNIKIADFGFSNEFT---PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 230
+++LL S+ IK++DFGF + + P K G+P + APE+ Y G EVD+WS
Sbjct: 170 DSILLTSDGRIKLSDFGFCAQVSKEVPKRK--XLVGTPYWMAPEVISRLPY-GTEVDIWS 226
Query: 231 LGVILYTLVSGSLPFDG----STLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
LG+++ ++ G P+ +R +R+ L + + +S+ L LV P++
Sbjct: 227 LGIMVIEMIDGEPPYFNEPPLQAMRRIRDS-LPPRVKDLHKVSSVLRGFLDLMLVREPSQ 285
Query: 287 RAS 289
RA+
Sbjct: 286 RAT 288
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
L++VME+ GG + D +V H RM E++ ++ A+ Y H + +IHRD+K++++LL
Sbjct: 117 LWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT 175
Query: 547 SEMNIKIADFGFSNEFT---PGNKLDTFCGSPPYAAPELF 583
S+ IK++DFGF + + P K G+P + APE+
Sbjct: 176 SDGRIKLSDFGFCAQVSKEVPKRK--XLVGTPYWMAPEVI 213
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 146/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 80 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 139
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 198
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S +C+
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXECQ 252
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P R + E+ + + T H S+SP P+
Sbjct: 253 HLIRWCLALRPXDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 200
Query: 583 FQ 584
+
Sbjct: 201 IR 202
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 14/212 (6%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G +++ + +G G F V H TG++VAIK + +L+P + ++ E++IMK L+HP
Sbjct: 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRERWCLEIQIMKKLNHP 72
Query: 106 NIVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGR---MKEKEARAKFRQIVS 156
N+V +V + + L L MEY GG++ YL +KE R I S
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 157 AVQYCHQKKIIHRDLKAENLLLD---SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
A++Y H+ +IIHRDLK EN++L + KI D G++ E G F G+ Y AP
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 245
EL + KKY VD WS G + + ++G PF
Sbjct: 193 ELLEQKKY-TVTVDYWSFGTLAFECITGFRPF 223
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 489 LVMEYASGGEVFDYLVLHGR---MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL 545
L MEY GG++ YL +KE R I SA++Y H+ +IIHRDLK EN++L
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154
Query: 546 D---SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
+ KI D G++ E G F G+ Y APEL +
Sbjct: 155 QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLE 196
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 134/270 (49%), Gaps = 17/270 (6%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK--LFREVRIMKML 102
+ Y + + +G G F V TG A K + + P K + +E++ M +L
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV----MTPHESDKETVRKEIQTMSVL 105
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYC 161
HP +V L E + + ++ E+ SGGE+F+ + H +M E EA RQ+ + +
Sbjct: 106 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 165
Query: 162 HQKKIIHRDLKAENLLLDSEMN--IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
H+ +H DLK EN++ ++ + +K+ DFG + P + G+ +AAPE+ +GK
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 225
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF----DGSTLRELRERVLRGKYRIPFYMSTDCENL 275
G D+WS+GV+ Y L+SG PF D TLR ++ +S D ++
Sbjct: 226 PV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 284
Query: 276 LKKFLVLNPAKRASLEVSGE---VTLGGAP 302
++K L+ +P R ++ + E +T G AP
Sbjct: 285 IRKLLLADPNTRMTIHQALEHPWLTPGNAP 314
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 473 TLLKLFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYCHQK 531
TL+ L E + + ++ E+ SGGE+F+ + H +M E EA RQ+ + + H+
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 532 KIIHRDLKAENLLLDSEMN--IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+H DLK EN++ ++ + +K+ DFG + P + G+ +AAPE+ +G
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG 224
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 116/219 (52%), Gaps = 4/219 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD 103
H+ ++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+
Sbjct: 2 HMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 161
HPNIVKL VI TE LYLV E+ + D L G + ++ Q++ + +C
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFC 120
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKK 220
H +++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G K
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
Y VD+WSLG I +V+ F G + + R+ R
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 123
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 13/202 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY+ + IG+G++ V ++ TG+ VAIK +++ +P + RE+R++K L HPN
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR------MKEKEARAKFRQIVSAVQY 160
+V L +V ++ L+LV EY D+ VLH + E ++ Q + AV +
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYC------DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNF 117
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGK 219
CH+ IHRD+K EN+L+ IK+ DFGF+ T P + D + Y +PEL G
Sbjct: 118 CHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD 177
Query: 220 KYDGPEVDVWSLGVILYTLVSG 241
GP VDVW++G + L+SG
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSG 199
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 17/127 (13%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR------MKEKEARAKFRQIVSAVQY 527
L+ L +V ++ L+LV EY D+ VLH + E ++ Q + AV +
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYC------DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNF 117
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQG- 585
CH+ IHRD+K EN+L+ IK+ DFGF+ T P + D + Y +PEL G
Sbjct: 118 CHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD 177
Query: 586 ---GAPV 589
G PV
Sbjct: 178 TQYGPPV 184
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 14/212 (6%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G +++ + +G G F V H TG++VAIK + +L+P + ++ E++IMK L+HP
Sbjct: 15 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRERWCLEIQIMKKLNHP 73
Query: 106 NIVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGR---MKEKEARAKFRQIVS 156
N+V +V + + L L MEY GG++ YL +KE R I S
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 157 AVQYCHQKKIIHRDLKAENLLLD---SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
A++Y H+ +IIHRDLK EN++L + KI D G++ E G F G+ Y AP
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 245
EL + KKY VD WS G + + ++G PF
Sbjct: 194 ELLEQKKY-TVTVDYWSFGTLAFECITGFRPF 224
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 489 LVMEYASGGEVFDYLVLHGR---MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL 545
L MEY GG++ YL +KE R I SA++Y H+ +IIHRDLK EN++L
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155
Query: 546 D---SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
+ KI D G++ E G F G+ Y APEL +
Sbjct: 156 QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLE 197
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 115/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ S + D L G + ++ Q++ + +CH +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 187 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ S + D L G + ++ Q++ + +CH
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 125
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 115/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ S + D L G + ++ Q++ + +CH +
Sbjct: 67 VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 186 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ S + D L G + ++ Q++ + +CH
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 124
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 137/258 (53%), Gaps = 15/258 (5%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 63 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 122
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 123 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 181
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S++C+
Sbjct: 182 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQ 235
Query: 274 NLLKKFLVLNPAKRASLE 291
+L++ L L P+ R + E
Sbjct: 236 HLIRWCLALRPSDRPTFE 253
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 124
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 183
Query: 583 FQ 584
+
Sbjct: 184 IR 185
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 147/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 27 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 86
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 87 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 146
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 147 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 205
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++RG+ +S +C+
Sbjct: 206 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXECQ 259
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 260 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 148
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 207
Query: 583 FQ 584
+
Sbjct: 208 IR 209
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 121/232 (52%), Gaps = 10/232 (4%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVR-IMKML 102
H ++++K IG+G F +V + K T + A+KI++K ++ + FRE R ++
Sbjct: 88 HREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNG 147
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYC 161
D I L + E LYLVM+Y GG++ L ++ E AR ++V A+
Sbjct: 148 DCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 207
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT--FCGSPPYAAPELFQGK 219
HQ +HRD+K +N+LLD +I++ADFG + + + G+P Y +PE+ Q
Sbjct: 208 HQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAM 267
Query: 220 -----KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF 266
KY GPE D WSLGV +Y ++ G PF +L E +++ + R F
Sbjct: 268 EDGMGKY-GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF 318
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
L + E LYLVM+Y GG++ L ++ E AR ++V A+ HQ +H
Sbjct: 155 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH 214
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT--FCGSPPYAAPELFQG 585
RD+K +N+LLD +I++ADFG + + + G+P Y +PE+ Q
Sbjct: 215 RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 266
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 121/232 (52%), Gaps = 10/232 (4%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVR-IMKML 102
H ++++K IG+G F +V + K T + A+KI++K ++ + FRE R ++
Sbjct: 72 HREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNG 131
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYC 161
D I L + E LYLVM+Y GG++ L ++ E AR ++V A+
Sbjct: 132 DCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 191
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT--FCGSPPYAAPELFQGK 219
HQ +HRD+K +N+LLD +I++ADFG + + + G+P Y +PE+ Q
Sbjct: 192 HQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAM 251
Query: 220 -----KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF 266
KY GPE D WSLGV +Y ++ G PF +L E +++ + R F
Sbjct: 252 EDGMGKY-GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF 302
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
L + E LYLVM+Y GG++ L ++ E AR ++V A+ HQ +H
Sbjct: 139 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH 198
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT--FCGSPPYAAPELFQG 585
RD+K +N+LLD +I++ADFG + + + G+P Y +PE+ Q
Sbjct: 199 RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 250
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK ENLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 122
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK ENLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 123 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK ENLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 186 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 124
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK ENLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 125 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK ENLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 185 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 123
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK ENLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 147/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 211
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++ G+ +S++C+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSSECQ 265
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 213
Query: 583 FQ 584
+
Sbjct: 214 IR 215
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 135/253 (53%), Gaps = 15/253 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVRIMKML 102
+Y++ +G G F V V VAIK ++K ++ + G L ++ EV ++K +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 103 D--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 159
+++L E + L++E ++FD++ G ++E+ AR+ F Q++ AV+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 160 YCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 218
+CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE +
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 183
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKK 278
+Y G VWSLG++LY +V G +PF E E ++RG+ +S++C++L++
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSSECQHLIRW 237
Query: 279 FLVLNPAKRASLE 291
L L P+ R + E
Sbjct: 238 CLALRPSDRPTFE 250
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 180
Query: 583 FQ 584
+
Sbjct: 181 IR 182
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYST 190
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 191 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 225
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 129
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 147/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 211
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++ G+ +S++C+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSSECQ 265
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 213
Query: 583 FQ 584
+
Sbjct: 214 IR 215
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYST 183
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 122
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 147/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 210
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++ G+ +S++C+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSSECQ 264
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 312
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 212
Query: 583 FQ 584
+
Sbjct: 213 IR 214
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 15/254 (5%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH-PNIVKL 110
K +G+G FA V+ TG+E A K + K + ++ E+ ++++ P ++ L
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLV--LHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 168
+V E + L++EYA+GGE+F + L + E + +QI+ V Y HQ I+H
Sbjct: 95 HEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVH 154
Query: 169 RDLKAENLLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD--G 223
DLK +N+LL S +IKI DFG S + +L G+P Y APE+ YD
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEIL---NYDPIT 211
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRE--LRERVLRGKYRIPFYMSTD--CENLLKKF 279
D+W++G+I Y L++ + PF G +E L + Y + S + ++
Sbjct: 212 TATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSL 271
Query: 280 LVLNPAKRASLEVS 293
LV NP KR + E+
Sbjct: 272 LVKNPEKRPTAEIC 285
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLV--LHGRMKEKEARAKFRQIVSAVQYCHQK 531
++ L +V E + L++EYA+GGE+F + L + E + +QI+ V Y HQ
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN 150
Query: 532 KIIHRDLKAENLLLDSEM---NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAP 588
I+H DLK +N+LL S +IKI DFG S + +L G+P Y APE+ P
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYD-P 209
Query: 589 VTSS 592
+T++
Sbjct: 210 ITTA 213
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 187 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 125
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 147/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 210
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++ G+ +S++C+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSSECQ 264
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 312
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 212
Query: 583 FQ 584
+
Sbjct: 213 IR 214
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 184
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 185 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 123
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 178
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 15/253 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVRIMKML 102
+Y++ +G G F V V VAIK ++K ++ + G L ++ EV ++K +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 103 D--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 159
+++L E + L++E ++FD++ G ++E+ AR+ F Q++ AV+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 160 YCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 218
+CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE +
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 183
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKK 278
+Y G VWSLG++LY +V G +PF E E ++RG+ +S +C++L++
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQVFFRQRVSXECQHLIRW 237
Query: 279 FLVLNPAKRASLE 291
L L P+ R + E
Sbjct: 238 CLALRPSDRPTFE 250
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 180
Query: 583 FQ 584
+
Sbjct: 181 IR 182
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 186 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 124
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 187 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 125
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 185 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 123
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 187
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 188 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 222
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 126
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 181
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 121
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 190
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 191 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 225
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 129
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 187 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 125
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLSFCHSHR 123
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLSFCHSH 122
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 186 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 124
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 122
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 182
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 121
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 122
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 187
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 188 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 222
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 126
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 181
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 122
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 122
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 119/216 (55%), Gaps = 6/216 (2%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY L+ IG+G + V A++ G+ A+K I + + G RE+ I+K L H N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 107 IVKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
IVKL+ VI T+K L LV E+ ++ D V G ++ A++ Q+++ + YCH +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+++HRDLK +NLL++ E +KIADFG + F P K + Y AP++ G K
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+D+WS+G I +V+G+ F G + + R+ R
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL+ VI T+K L LV E+ ++ D V G ++ A++ Q+++ + YCH +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGGAPVT 590
+++HRDLK +NLL++ E +KIADFG + F P K + Y AP++ G +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 591 SS 592
++
Sbjct: 180 TT 181
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 122
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 122
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 121
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 119/216 (55%), Gaps = 6/216 (2%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY L+ IG+G + V A++ G+ A+K I + + G RE+ I+K L H N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 107 IVKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
IVKL+ VI T+K L LV E+ ++ D V G ++ A++ Q+++ + YCH +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+++HRDLK +NLL++ E +KIADFG + F P K + Y AP++ G K
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+D+WS+G I +V+G+ F G + + R+ R
Sbjct: 180 TTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFR 215
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL+ VI T+K L LV E+ ++ D V G ++ A++ Q+++ + YCH +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGGAPVT 590
+++HRDLK +NLL++ E +KIADFG + F P K + Y AP++ G +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 591 SS 592
++
Sbjct: 180 TT 181
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 119/216 (55%), Gaps = 6/216 (2%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY L+ IG+G + V A++ G+ A+K I + + G RE+ I+K L H N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 107 IVKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
IVKL+ VI T+K L LV E+ ++ D V G ++ A++ Q+++ + YCH +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+++HRDLK +NLL++ E +KIADFG + F P K + Y AP++ G K
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+D+WS+G I +V+G+ F G + + R+ R
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL+ VI T+K L LV E+ ++ D V G ++ A++ Q+++ + YCH +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGGAPVT 590
+++HRDLK +NLL++ E +KIADFG + F P K + Y AP++ G +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 591 SS 592
++
Sbjct: 180 TT 181
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 146/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 211
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++ G+ +S +C+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSXECQ 265
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 213
Query: 583 FQ 584
+
Sbjct: 214 IR 215
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 182
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 121
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ D L G + ++ Q++ + +CH +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 187 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ D L G + ++ Q++ + +CH
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 125
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 146/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 211
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++ G+ +S +C+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSXECQ 265
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 213
Query: 583 FQ 584
+
Sbjct: 214 IR 215
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 146/292 (50%), Gaps = 20/292 (6%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVR 97
EP +Y++ +G G F V V VAIK ++K ++ + G L ++ EV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 98 IMKMLD--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQI 154
++K + +++L E + L++E ++FD++ G ++E+ AR+ F Q+
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ P
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPP 210
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E + +Y G VWSLG++LY +V G +PF E E ++ G+ +S +C+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSXECQ 264
Query: 274 NLLKKFLVLNPAKRASL-EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+L++ L L P+ R + E+ + + T H S+SP P+
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE----TAEIHLHSLSPGPS 312
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 212
Query: 583 FQ 584
+
Sbjct: 213 IR 214
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+K I G RE+ ++K L+HPNI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ D L G + ++ Q++ + +CH +
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ D L G + ++ Q++ + +CH
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 121
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 113/215 (52%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+ I G RE+ ++K L+HPNI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 122
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 113/215 (52%), Gaps = 4/215 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ ++ IG+G + V A++ TG+ VA+ I G RE+ ++K L+HPNI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 108 VKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
VKL VI TE LYLV E+ + D L G + ++ Q++ + +CH +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G KY
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
VD+WSLG I +V+ F G + + R+ R
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL VI TE LYLV E+ + D L G + ++ Q++ + +CH
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH 121
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+++HRDLK +NLL+++E IK+ADFG + F P + Y APE+ G
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 134/253 (52%), Gaps = 15/253 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSL---QKLFREVRIMKML 102
+Y++ +G G F V V VAIK ++K ++ + G L ++ EV ++K +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 103 D--HPNIVKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 159
+++L E + L++E ++FD++ G ++E+ AR+ F Q++ AV+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 160 YCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 218
+CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE +
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRY 183
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKK 278
+Y G VWSLG++LY +V G +PF E E ++ G+ +S++C++L++
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIGGQVFFRQRVSSECQHLIRW 237
Query: 279 FLVLNPAKRASLE 291
L L P+ R + E
Sbjct: 238 CLALRPSDRPTFE 250
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 180
Query: 583 FQ 584
+
Sbjct: 181 IR 182
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 135/268 (50%), Gaps = 40/268 (14%)
Query: 48 YKLLKTI-GKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH-- 104
Y+L K + G G KV H TG++ A+K+ L+ + + +DH
Sbjct: 30 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKL-------------LYDSPKARQEVDHHW 76
Query: 105 -----PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQ 153
P+IV + V E ++ L ++ME GGE+F + G E+EA R
Sbjct: 77 QASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRD 136
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPY 210
I +A+Q+ H I HRD+K ENLL S + +K+ DFGF+ E T N L T C +P Y
Sbjct: 137 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE-TTQNALQTPCYTPYY 195
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRE----LRERVLRGKYRIP- 265
APE+ +KYD D+WSLGVI+Y L+ G PF +T + ++ R+ G+Y P
Sbjct: 196 VAPEVLGPEKYDK-SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 254
Query: 266 ---FYMSTDCENLLKKFLVLNPAKRASL 290
+S D + L++ L +P +R ++
Sbjct: 255 PEWSEVSEDAKQLIRLLLKTDPTERLTI 282
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 468 SSGGETLLKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQI 521
+SGG ++ + V E ++ L ++ME GGE+F + G E+EA R I
Sbjct: 78 ASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 137
Query: 522 VSAVQYCHQKKIIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYA 578
+A+Q+ H I HRD+K ENLL S + +K+ DFGF+ E T N L T C +P Y
Sbjct: 138 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE-TTQNALQTPCYTPYYV 196
Query: 579 APELF 583
APE+
Sbjct: 197 APEVL 201
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 131/249 (52%), Gaps = 14/249 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
+ +L+ +G+G++ V A H TG+ VAIK + LQ++ +E+ IM+ D P++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE----SDLQEIIKEISIMQQCDSPHV 86
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKKI 166
VK + L++VMEY G V D + L + + E E + + ++Y H +
Sbjct: 87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTFCGSPPYAAPELFQGKKYDGPE 225
IHRD+KA N+LL++E + K+ADFG + + T K + G+P + APE+ Q Y+
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCV- 205
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVL-----RGKYRIPFYMSTDCENLLKKFL 280
D+WSLG+ + G P+ + + +R + +R P S + + +K+ L
Sbjct: 206 ADIWSLGITAIEMAEGKPPY--ADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCL 263
Query: 281 VLNPAKRAS 289
V +P +RA+
Sbjct: 264 VKSPEQRAT 272
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 487 LYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL 545
L++VMEY G V D + L + + E E + + ++Y H + IHRD+KA N+LL
Sbjct: 99 LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL 158
Query: 546 DSEMNIKIADFGFSNEFTPG-NKLDTFCGSPPYAAPELFQ 584
++E + K+ADFG + + T K + G+P + APE+ Q
Sbjct: 159 NTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQ 198
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 135/268 (50%), Gaps = 40/268 (14%)
Query: 48 YKLLKTI-GKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH-- 104
Y+L K + G G KV H TG++ A+K+ L+ + + +DH
Sbjct: 11 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKL-------------LYDSPKARQEVDHHW 57
Query: 105 -----PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQ 153
P+IV + V E ++ L ++ME GGE+F + G E+EA R
Sbjct: 58 QASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRD 117
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPY 210
I +A+Q+ H I HRD+K ENLL S + +K+ DFGF+ E T N L T C +P Y
Sbjct: 118 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE-TTQNALQTPCYTPYY 176
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRE----LRERVLRGKYRIP- 265
APE+ +KYD D+WSLGVI+Y L+ G PF +T + ++ R+ G+Y P
Sbjct: 177 VAPEVLGPEKYDK-SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 235
Query: 266 ---FYMSTDCENLLKKFLVLNPAKRASL 290
+S D + L++ L +P +R ++
Sbjct: 236 PEWSEVSEDAKQLIRLLLKTDPTERLTI 263
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 468 SSGGETLLKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQI 521
+SGG ++ + V E ++ L ++ME GGE+F + G E+EA R I
Sbjct: 59 ASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 118
Query: 522 VSAVQYCHQKKIIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYA 578
+A+Q+ H I HRD+K ENLL S + +K+ DFGF+ E T N L T C +P Y
Sbjct: 119 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE-TTQNALQTPCYTPYYV 177
Query: 579 APELF 583
APE+
Sbjct: 178 APEVL 182
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 137/244 (56%), Gaps = 16/244 (6%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
IG+G+ V LA+ +G++VA+K++D + L LF EV IM+ H N+V++++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRREL--LFNEVVIMRDYQHFNVVEMYKS 110
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 173
+ L+++ME+ GG + D +V R+ E++ ++ A+ Y H + +IHRD+K+
Sbjct: 111 YLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKS 169
Query: 174 ENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 232
+++LL + +K++DFGF + + K G+P + APE+ Y EVD+WSLG
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLY-ATEVDIWSLG 228
Query: 233 VILYTLVSGSLPFDGST----LRELRER---VLRGKYRIPFYMSTDCENLLKKFLVLNPA 285
+++ +V G P+ + ++ LR+ L+ +++ S + L++ LV +P
Sbjct: 229 IMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKV----SPVLRDFLERMLVRDPQ 284
Query: 286 KRAS 289
+RA+
Sbjct: 285 ERAT 288
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
Query: 478 FQVIETEKT------LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
F V+E K+ L+++ME+ GG + D +V R+ E++ ++ A+ Y H +
Sbjct: 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQ 160
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELF 583
+IHRD+K++++LL + +K++DFGF + + K G+P + APE+
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVI 213
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 111/206 (53%), Gaps = 4/206 (1%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIK-IIDKTQLNPGSLQKLFREVRIMKMLDHP 105
+YK++ +G G + V LA+ +VAIK I + +L++ REV L H
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQ 71
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
NIV + V E + YLVMEY G + +Y+ HG + A QI+ +++ H +
Sbjct: 72 NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMR 131
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF--TPGNKLDTFCGSPPYAAPELFQGKKYDG 223
I+HRD+K +N+L+DS +KI DFG + T + + G+ Y +PE +G+ D
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGST 249
D++S+G++LY ++ G PF+G T
Sbjct: 192 C-TDIYSIGIVLYEMLVGEPPFNGET 216
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
+ ++ + V E + YLVMEY G + +Y+ HG + A QI+ +++ H
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF--TPGNKLDTFCGSPPYAAPELFQGGA 587
+I+HRD+K +N+L+DS +KI DFG + T + + G+ Y +PE +G A
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEA 188
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 17/213 (7%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y+L + IG G A V+ A P ++VAIK I+ + S+ +L +E++ M HPNI
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT-SMDELLKEIQAMSQCHHPNI 75
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFD---YLVLHGRMK-----EKEARAKFRQIVSAVQ 159
V + + L+LVM+ SGG V D ++V G K E R+++ ++
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL------DTFCGSPPYAAP 213
Y H+ IHRD+KA N+LL + +++IADFG S G + TF G+P + AP
Sbjct: 136 YLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 195
Query: 214 ELF-QGKKYDGPEVDVWSLGVILYTLVSGSLPF 245
E+ Q + YD + D+WS G+ L +G+ P+
Sbjct: 196 EVMEQVRGYDF-KADIWSFGITAIELATGAAPY 227
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 14/112 (12%)
Query: 487 LYLVMEYASGGEVFD---YLVLHGRMK-----EKEARAKFRQIVSAVQYCHQKKIIHRDL 538
L+LVM+ SGG V D ++V G K E R+++ ++Y H+ IHRD+
Sbjct: 88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDV 147
Query: 539 KAENLLLDSEMNIKIADFGFSNEFTPGNKL------DTFCGSPPYAAPELFQ 584
KA N+LL + +++IADFG S G + TF G+P + APE+ +
Sbjct: 148 KAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 199
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 113/214 (52%), Gaps = 19/214 (8%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y+L + IG G A V+ A P ++VAIK I+ + S+ +L +E++ M HPNI
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT-SMDELLKEIQAMSQCHHPNI 70
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLH---------GRMKEKEARAKFRQIVSAV 158
V + + L+LVM+ SGG V D ++ H G + E R+++ +
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLD-IIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL------DTFCGSPPYAA 212
+Y H+ IHRD+KA N+LL + +++IADFG S G + TF G+P + A
Sbjct: 130 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 189
Query: 213 PELF-QGKKYDGPEVDVWSLGVILYTLVSGSLPF 245
PE+ Q + YD + D+WS G+ L +G+ P+
Sbjct: 190 PEVMEQVRGYDF-KADIWSFGITAIELATGAAPY 222
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 16/113 (14%)
Query: 487 LYLVMEYASGGEVFDYLVLH---------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 537
L+LVM+ SGG V D ++ H G + E R+++ ++Y H+ IHRD
Sbjct: 83 LWLVMKLLSGGSVLD-IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRD 141
Query: 538 LKAENLLLDSEMNIKIADFGFSNEFTPGNKL------DTFCGSPPYAAPELFQ 584
+KA N+LL + +++IADFG S G + TF G+P + APE+ +
Sbjct: 142 VKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 194
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 111/204 (54%), Gaps = 10/204 (4%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++++ +G G F KV A++ T A K+ID + L+ E+ I+ DHPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNI 96
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL E L++++E+ +GG V ++ L + E + + +Q + A+ Y H KI
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTFCGSPPYAAPELF-----QGKK 220
IHRDLKA N+L + +IK+ADFG S + T + D+F G+P + APE+ + +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 221 YDGPEVDVWSLGVILYTLVSGSLP 244
YD + DVWSLG+ L + P
Sbjct: 217 YDY-KADVWSLGITLIEMAEIEPP 239
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAV 525
AS ++KL E L++++E+ +GG V ++ L + E + + +Q + A+
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTFCGSPPYAAPEL 582
Y H KIIHRDLKA N+L + +IK+ADFG S + T + D+F G+P + APE+
Sbjct: 149 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEV 206
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 111/204 (54%), Gaps = 10/204 (4%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++++ +G G F KV A++ T A K+ID + L+ E+ I+ DHPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNI 96
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL E L++++E+ +GG V ++ L + E + + +Q + A+ Y H KI
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTFCGSPPYAAPELF-----QGKK 220
IHRDLKA N+L + +IK+ADFG S + T + D+F G+P + APE+ + +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 221 YDGPEVDVWSLGVILYTLVSGSLP 244
YD + DVWSLG+ L + P
Sbjct: 217 YDY-KADVWSLGITLIEMAEIEPP 239
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAV 525
AS ++KL E L++++E+ +GG V ++ L + E + + +Q + A+
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTFCGSPPYAAPEL 582
Y H KIIHRDLKA N+L + +IK+ADFG S + T + D+F G+P + APE+
Sbjct: 149 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV 206
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 136/274 (49%), Gaps = 41/274 (14%)
Query: 53 TIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLD-HPNIVKL 110
+G+G A+V+ ++ T +E A+KII+K PG ++ ++FREV ++ H N+++L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK---QPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 170
+ E E YLV E GG + ++ E EA + + SA+ + H K I HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 171 LKAENLLLDSEMN---IKIADFGFSN------EFTPGN--KLDTFCGSPPYAAPELF--- 216
LK EN+L + +KI DFG + + +P + +L T CGS Y APE+
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 217 --QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---------------STLRELRERVLR 259
+ YD D+WSLGVILY L+SG PF G + L E +
Sbjct: 197 SEEASIYD-KRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 260 GKYRIP----FYMSTDCENLLKKFLVLNPAKRAS 289
GKY P ++S ++L+ K LV + +R S
Sbjct: 256 GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS 289
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
YLV E GG + ++ E EA + + SA+ + H K I HRDLK EN+L +
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 547 SEMN---IKIADFGFSN------EFTPGN--KLDTFCGSPPYAAPELFQG 585
+KI DFG + + +P + +L T CGS Y APE+ +
Sbjct: 146 HPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 136/260 (52%), Gaps = 20/260 (7%)
Query: 74 VAIKIIDKTQL-NPGSL---QKLFREVRIMKMLD--HPNIVKLFQVIETEKTLYLVMEYA 127
VAIK ++K ++ + G L ++ EV ++K + +++L E + L++E
Sbjct: 79 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 138
Query: 128 SG-GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD-SEMNIK 185
++FD++ G ++E+ AR+ F Q++ AV++CH ++HRD+K EN+L+D + +K
Sbjct: 139 EPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 198
Query: 186 IADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 245
+ DFG S F G+ Y+ PE + +Y G VWSLG++LY +V G +PF
Sbjct: 199 LIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
Query: 246 DGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRASL-EVSGEVTLGGAPVT 304
+ E ++RG+ +S++C++L++ L L P+ R + E+ + +
Sbjct: 258 EHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 311
Query: 305 SSGGAGTNHTHNSSISPAPT 324
T H S+SP P+
Sbjct: 312 QE----TAEIHLHSLSPGPS 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 465 RRASSGGETLLKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVS 523
++ SSG +++L E + L++E ++FD++ G ++E+ AR+ F Q++
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 524 AVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
AV++CH ++HRD+K EN+L+D + +K+ DFG S F G+ Y+ PE
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEW 227
Query: 583 FQ 584
+
Sbjct: 228 IR 229
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 105 PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAV 158
P+IV++ V E K L +VME GGE+F + G E+EA + I A+
Sbjct: 85 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 144
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
QY H I HRD+K ENLL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 145 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 204
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF---DGSTLRE-LRERVLRGKYRIP----FY 267
+KYD D+WSLGVI+Y L+ G PF G + ++ R+ G+Y P
Sbjct: 205 LGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 263
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
+S + + L++ L P +R ++
Sbjct: 264 VSEEVKMLIRNLLKTEPTQRMTI 286
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
K L +VME GGE+F + G E+EA + I A+QY H I HRD+K EN
Sbjct: 102 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 161
Query: 543 LLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
LL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 162 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 205
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 10/204 (4%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++++ +G G F KV A++ T A K+ID + L+ E+ I+ DHPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNI 96
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
VKL E L++++E+ +GG V ++ L + E + + +Q + A+ Y H KI
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTFCGSPPYAAPELF-----QGKK 220
IHRDLKA N+L + +IK+ADFG S + T + D F G+P + APE+ + +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 221 YDGPEVDVWSLGVILYTLVSGSLP 244
YD + DVWSLG+ L + P
Sbjct: 217 YDY-KADVWSLGITLIEMAEIEPP 239
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAV 525
AS ++KL E L++++E+ +GG V ++ L + E + + +Q + A+
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTFCGSPPYAAPEL 582
Y H KIIHRDLKA N+L + +IK+ADFG S + T + D F G+P + APE+
Sbjct: 149 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEV 206
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 105 PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAV 158
P+IV++ V E K L +VME GGE+F + G E+EA + I A+
Sbjct: 121 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 180
Query: 159 QYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
QY H I HRD+K ENLL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 181 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 240
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF---DGSTLRE-LRERVLRGKYRIP----FY 267
+KYD D+WSLGVI+Y L+ G PF G + ++ R+ G+Y P
Sbjct: 241 LGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 299
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
+S + + L++ L P +R ++
Sbjct: 300 VSEEVKMLIRNLLKTEPTQRMTI 322
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
K L +VME GGE+F + G E+EA + I A+QY H I HRD+K EN
Sbjct: 138 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 197
Query: 543 LLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
LL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 198 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 241
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 105 PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAV 158
P+IV++ V E K L +VME GGE+F + G E+EA + I A+
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 174
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
QY H I HRD+K ENLL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 234
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF---DGSTLRE-LRERVLRGKYRIP----FY 267
+KYD D+WSLGVI+Y L+ G PF G + ++ R+ G+Y P
Sbjct: 235 LGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 293
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
+S + + L++ L P +R ++
Sbjct: 294 VSEEVKMLIRNLLKTEPTQRMTI 316
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
K L +VME GGE+F + G E+EA + I A+QY H I HRD+K EN
Sbjct: 132 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 191
Query: 543 LLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
LL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 192 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 235
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 125/261 (47%), Gaps = 24/261 (9%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 110
L+ IGKG+F +V T K VAIKIID + +E+ ++ D P + K
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYVTKY 70
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 170
+ + L+++MEY GG D L+ G + E + R+I+ + Y H +K IHRD
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 171 LKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGKKYDGPEVDVW 229
+KA N+LL +K+ADFG + + T K +TF G+P + APE+ + YD + D+W
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS-KADIW 188
Query: 230 SLGVILYTLVSGSLP--------------------FDGSTLRELRERVLRGKYRIPFYMS 269
SLG+ L G P +G+ + L+E V + P +
Sbjct: 189 SLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRP 248
Query: 270 TDCENLLKKFLVLNPAKRASL 290
T E L KF++ N K + L
Sbjct: 249 TAKELLKHKFILRNAKKTSYL 269
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
L+++MEY GG D L+ G + E + R+I+ + Y H +K IHRD+KA N+LL
Sbjct: 80 LWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 138
Query: 547 SEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGGA 587
+K+ADFG + + T K +TF G+P + APE+ + A
Sbjct: 139 EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA 180
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 125/261 (47%), Gaps = 24/261 (9%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 110
L+ IGKG+F +V T K VAIKIID + +E+ ++ D P + K
Sbjct: 32 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYVTKY 90
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 170
+ + L+++MEY GG D L+ G + E + R+I+ + Y H +K IHRD
Sbjct: 91 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 149
Query: 171 LKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGKKYDGPEVDVW 229
+KA N+LL +K+ADFG + + T K +TF G+P + APE+ + YD + D+W
Sbjct: 150 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS-KADIW 208
Query: 230 SLGVILYTLVSGSLP--------------------FDGSTLRELRERVLRGKYRIPFYMS 269
SLG+ L G P +G+ + L+E V + P +
Sbjct: 209 SLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRP 268
Query: 270 TDCENLLKKFLVLNPAKRASL 290
T E L KF++ N K + L
Sbjct: 269 TAKELLKHKFILRNAKKTSYL 289
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
L+++MEY GG D L+ G + E + R+I+ + Y H +K IHRD+KA N+LL
Sbjct: 100 LWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 158
Query: 547 SEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGGA 587
+K+ADFG + + T K +TF G+P + APE+ + A
Sbjct: 159 EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA 200
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 105 PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAV 158
P+IV++ V E K L +VME GGE+F + G E+EA + I A+
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
QY H I HRD+K ENLL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 188
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF---DGSTLRE-LRERVLRGKYRIP----FY 267
+KYD D+WSLGVI+Y L+ G PF G + ++ R+ G+Y P
Sbjct: 189 LGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 247
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
+S + + L++ L P +R ++
Sbjct: 248 VSEEVKMLIRNLLKTEPTQRMTI 270
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
K L +VME GGE+F + G E+EA + I A+QY H I HRD+K EN
Sbjct: 86 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 145
Query: 543 LLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
LL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 146 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 189
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 105 PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAV 158
P+IV++ V E K L +VME GGE+F + G E+EA + I A+
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
QY H I HRD+K ENLL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 190
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF---DGSTLRE-LRERVLRGKYRIP----FY 267
+KYD D+WSLGVI+Y L+ G PF G + ++ R+ G+Y P
Sbjct: 191 LGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 249
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
+S + + L++ L P +R ++
Sbjct: 250 VSEEVKMLIRNLLKTEPTQRMTI 272
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
K L +VME GGE+F + G E+EA + I A+QY H I HRD+K EN
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 147
Query: 543 LLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
LL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 148 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 191
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 105 PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAV 158
P+IV++ V E K L +VME GGE+F + G E+EA + I A+
Sbjct: 77 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 136
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
QY H I HRD+K ENLL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 137 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 196
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF---DGSTLRE-LRERVLRGKYRIP----FY 267
+KYD D+WSLGVI+Y L+ G PF G + ++ R+ G+Y P
Sbjct: 197 LGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 255
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
+S + + L++ L P +R ++
Sbjct: 256 VSEEVKMLIRNLLKTEPTQRMTI 278
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
K L +VME GGE+F + G E+EA + I A+QY H I HRD+K EN
Sbjct: 94 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 153
Query: 543 LLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
LL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 154 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 197
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 105 PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAV 158
P+IV++ V E K L +VME GGE+F + G E+EA + I A+
Sbjct: 70 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 129
Query: 159 QYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
QY H I HRD+K ENLL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 130 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 189
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF---DGSTLRE-LRERVLRGKYRIP----FY 267
+KYD D+WSLGVI+Y L+ G PF G + ++ R+ G+Y P
Sbjct: 190 LGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 248
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
+S + + L++ L P +R ++
Sbjct: 249 VSEEVKMLIRNLLKTEPTQRMTI 271
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
K L +VME GGE+F + G E+EA + I A+QY H I HRD+K EN
Sbjct: 87 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 146
Query: 543 LLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
LL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 147 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 190
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 105 PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAV 158
P+IV++ V E K L +VME GGE+F + G E+EA + I A+
Sbjct: 75 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 134
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
QY H I HRD+K ENLL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 135 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 194
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF---DGSTLRE-LRERVLRGKYRIP----FY 267
+KYD D+WSLGVI+Y L+ G PF G + ++ R+ G+Y P
Sbjct: 195 LGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 253
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
+S + + L++ L P +R ++
Sbjct: 254 VSEEVKMLIRNLLKTEPTQRMTI 276
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
K L +VME GGE+F + G E+EA + I A+QY H I HRD+K EN
Sbjct: 92 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 151
Query: 543 LLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
LL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 152 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 195
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 115/224 (51%), Gaps = 10/224 (4%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVR-IMKMLDHPN 106
+++LK IG+G F++V + K TG+ A+KI++K + FRE R ++ D
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKK 165
I +L + E LYLVMEY GG++ L G R+ + AR +IV A+ H+
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--CGSPPYAAPELFQG----- 218
+HRD+K +N+LLD +I++ADFG + + + G+P Y +PE+ Q
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGP 242
Query: 219 -KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK 261
GPE D W+LGV Y + G PF + E +++ K
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK 286
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKII 534
+L + E LYLVMEY GG++ L G R+ + AR +IV A+ H+ +
Sbjct: 125 QLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYV 184
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--CGSPPYAAPELFQ 584
HRD+K +N+LLD +I++ADFG + + + G+P Y +PE+ Q
Sbjct: 185 HRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQ 236
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 105 PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAV 158
P+IV++ V E K L +VME GGE+F + G E+EA + I A+
Sbjct: 76 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 135
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
QY H I HRD+K ENLL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 136 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 195
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF---DGSTLRE-LRERVLRGKYRIP----FY 267
+KYD D+WSLGVI+Y L+ G PF G + ++ R+ G+Y P
Sbjct: 196 LGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 254
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
+S + + L++ L P +R ++
Sbjct: 255 VSEEVKMLIRNLLKTEPTQRMTI 277
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
K L +VME GGE+F + G E+EA + I A+QY H I HRD+K EN
Sbjct: 93 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 152
Query: 543 LLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
LL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 153 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 196
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 105 PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAV 158
P+IV++ V E K L +VME GGE+F + G E+EA + I A+
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 159 QYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
QY H I HRD+K ENLL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 190
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF---DGSTLRE-LRERVLRGKYRIP----FY 267
+KYD D+WSLGVI+Y L+ G PF G + ++ R+ G+Y P
Sbjct: 191 LGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 249
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
+S + + L++ L P +R ++
Sbjct: 250 VSEEVKMLIRNLLKTEPTQRMTI 272
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
K L +VME GGE+F + G E+EA + I A+QY H I HRD+K EN
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 147
Query: 543 LLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
LL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 148 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 191
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 110/206 (53%), Gaps = 6/206 (2%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY+ L+ +G+G + V AK G+ VA+K I + G RE+ ++K L HPN
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 107 IVKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
IV L VI +E+ L LV E+ +V D +++ + + Q++ V +CHQ
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+I+HRDLK +NLL++S+ +K+ADFG + F P + Y AP++ G K
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGST 249
VD+WS+G I +++G F G T
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVT 224
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++ L VI +E+ L LV E+ +V D +++ + + Q++ V +CHQ
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGGAPVT 590
+I+HRDLK +NLL++S+ +K+ADFG + F P + Y AP++ G +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 591 SS 592
+S
Sbjct: 199 TS 200
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 110/206 (53%), Gaps = 6/206 (2%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY+ L+ +G+G + V AK G+ VA+K I + G RE+ ++K L HPN
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 107 IVKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
IV L VI +E+ L LV E+ +V D +++ + + Q++ V +CHQ
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+I+HRDLK +NLL++S+ +K+ADFG + F P + Y AP++ G K
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGST 249
VD+WS+G I +++G F G T
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVT 224
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++ L VI +E+ L LV E+ +V D +++ + + Q++ V +CHQ
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGGAPVT 590
+I+HRDLK +NLL++S+ +K+ADFG + F P + Y AP++ G +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 591 SS 592
+S
Sbjct: 199 TS 200
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 12/202 (5%)
Query: 52 KTIGK-GNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 110
+ IG+ G+F KV A++ T A K+ID + L+ E+ I+ DHPNIVKL
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKL 72
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
E L++++E+ +GG V ++ L + E + + +Q + A+ Y H KIIHR
Sbjct: 73 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 132
Query: 170 DLKAENLLLDSEMNIKIADFGFS--NEFTPGNKLDTFCGSPPYAAPELF-----QGKKYD 222
DLKA N+L + +IK+ADFG S N T + D+F G+P + APE+ + + YD
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 192
Query: 223 GPEVDVWSLGVILYTLVSGSLP 244
+ DVWSLG+ L + P
Sbjct: 193 Y-KADVWSLGITLIEMAEIEPP 213
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAV 525
AS ++KL E L++++E+ +GG V ++ L + E + + +Q + A+
Sbjct: 62 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 121
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS--NEFTPGNKLDTFCGSPPYAAPEL 582
Y H KIIHRDLKA N+L + +IK+ADFG S N T + D+F G+P + APE+
Sbjct: 122 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEV 180
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 24/261 (9%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 110
L+ IGKG+F +V T K VAIKIID + +E+ ++ D P + K
Sbjct: 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYVTKY 85
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 170
+ + L+++MEY GG D L+ G + E + R+I+ + Y H +K IHRD
Sbjct: 86 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 144
Query: 171 LKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGKKYDGPEVDVW 229
+KA N+LL +K+ADFG + + T K + F G+P + APE+ + YD + D+W
Sbjct: 145 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDS-KADIW 203
Query: 230 SLGVILYTLVSGSLP--------------------FDGSTLRELRERVLRGKYRIPFYMS 269
SLG+ L G P +G+ + L+E V + P +
Sbjct: 204 SLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRP 263
Query: 270 TDCENLLKKFLVLNPAKRASL 290
T E L KF++ N K + L
Sbjct: 264 TAKELLKHKFILRNAKKTSYL 284
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
L+++MEY GG D L+ G + E + R+I+ + Y H +K IHRD+KA N+LL
Sbjct: 95 LWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 153
Query: 547 SEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGGA 587
+K+ADFG + + T K + F G+P + APE+ + A
Sbjct: 154 EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA 195
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 24/261 (9%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 110
L+ IGKG+F +V T K VAIKIID + +E+ ++ D P + K
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYVTKY 70
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 170
+ + L+++MEY GG D L+ G + E + R+I+ + Y H +K IHRD
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 171 LKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGKKYDGPEVDVW 229
+KA N+LL +K+ADFG + + T K + F G+P + APE+ + YD + D+W
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDS-KADIW 188
Query: 230 SLGVILYTLVSGSLP--------------------FDGSTLRELRERVLRGKYRIPFYMS 269
SLG+ L G P +G+ + L+E V + P +
Sbjct: 189 SLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRP 248
Query: 270 TDCENLLKKFLVLNPAKRASL 290
T E L KF++ N K + L
Sbjct: 249 TAKELLKHKFILRNAKKTSYL 269
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
L+++MEY GG D L+ G + E + R+I+ + Y H +K IHRD+KA N+LL
Sbjct: 80 LWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 138
Query: 547 SEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGGA 587
+K+ADFG + + T K + F G+P + APE+ + A
Sbjct: 139 EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA 180
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 123/252 (48%), Gaps = 14/252 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK--LFREVRIMKMLDHP 105
Y +L+ +G G F V TG+ K I+ P L K + E+ IM L HP
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFIN----TPYPLDKYTVKNEISIMNQLHHP 108
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQK 164
++ L E + + L++E+ SGGE+FD + +M E E RQ +++ H+
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH 168
Query: 165 KIIHRDLKAENLLLDSEM--NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
I+H D+K EN++ +++ ++KI DFG + + P + + +AAPE+ +
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPV- 227
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP----FYMSTDCENLLKK 278
G D+W++GV+ Y L+SG PF G E + V R + +S + ++ +K
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN 287
Query: 279 FLVLNPAKRASL 290
L P KR ++
Sbjct: 288 LLQKEPRKRLTV 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKK 532
L+ L E + + L++E+ SGGE+FD + +M E E RQ +++ H+
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 169
Query: 533 IIHRDLKAENLLLDSEM--NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
I+H D+K EN++ +++ ++KI DFG + + P + + +AAPE+
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEI 221
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 106/203 (52%), Gaps = 18/203 (8%)
Query: 105 PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAV 158
P+IV++ V E K L +VME GGE+F + G E+EA + I A+
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
QY H I HRD+K ENLL S+ +K+ DFGF+ E T N L C +P Y APE+
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEV 188
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF---DGSTLRE-LRERVLRGKYRIP----FY 267
+KYD D+WSLGVI+Y L+ G PF G + ++ R+ G+Y P
Sbjct: 189 LGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 247
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
+S + + L++ L P +R ++
Sbjct: 248 VSEEVKMLIRNLLKTEPTQRMTI 270
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
K L +VME GGE+F + G E+EA + I A+QY H I HRD+K EN
Sbjct: 86 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 145
Query: 543 LLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
LL S+ +K+ DFGF+ E T N L C +P Y APE+
Sbjct: 146 LLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVL 189
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 41/274 (14%)
Query: 53 TIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLD-HPNIVKL 110
+G+G A+V+ ++ T +E A+KII+K PG ++ ++FREV ++ H N+++L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK---QPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 170
+ E E YLV E GG + ++ E EA + + SA+ + H K I HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 171 LKAENLLLDSEMN---IKIADFGFSN------EFTPGN--KLDTFCGSPPYAAPELF--- 216
LK EN+L + +KI DF + + +P + +L T CGS Y APE+
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 217 --QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---------------STLRELRERVLR 259
+ YD D+WSLGVILY L+SG PF G + L E +
Sbjct: 197 SEEASIYD-KRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 260 GKYRIP----FYMSTDCENLLKKFLVLNPAKRAS 289
GKY P ++S ++L+ K LV + +R S
Sbjct: 256 GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS 289
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
YLV E GG + ++ E EA + + SA+ + H K I HRDLK EN+L +
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 547 SEMN---IKIADFGFSN------EFTPGN--KLDTFCGSPPYAAPELFQG 585
+KI DF + + +P + +L T CGS Y APE+ +
Sbjct: 146 HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 124/255 (48%), Gaps = 16/255 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMKMLDH 104
+Y+L + +G G ++V LA+ + ++VA+K++ + L +P + RE + L+H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNH 71
Query: 105 PNIVKLFQVIETEKTL----YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
P IV ++ E E Y+VMEY G + D + G M K A A+ +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLD---TFCGSPPYAAPELF 216
HQ IIHRD+K N+L+ + +K+ DFG + GN + G+ Y +PE
Sbjct: 132 SHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFY----MSTDC 272
+G D DV+SLG +LY +++G PF G + + + +R P +S D
Sbjct: 192 RGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 250
Query: 273 ENLLKKFLVLNPAKR 287
+ ++ K L NP R
Sbjct: 251 DAVVLKALAKNPENR 265
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
Y+VMEY G + D + G M K A A+ + HQ IIHRD+K N+L+ +
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISA 151
Query: 548 EMNIKIADFGFSNEFT-PGNKLD---TFCGSPPYAAPELFQG 585
+K+ DFG + GN + G+ Y +PE +G
Sbjct: 152 TNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARG 193
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 111/203 (54%), Gaps = 8/203 (3%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++++ +G G F KV AK+ TG A K+I+ + L+ E+ I+ DHP I
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYI 78
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKKI 166
VKL + L++++E+ GG V ++ R + E + + RQ++ A+ + H K+I
Sbjct: 79 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI 138
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKY-DGP 224
IHRDLKA N+L+ E +I++ADFG S + K D+F G+P + APE+ + D P
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 225 ---EVDVWSLGVILYTLVSGSLP 244
+ D+WSLG+ L + P
Sbjct: 199 YDYKADIWSLGITLIEMAQIEPP 221
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAV 525
A+ ++KL + L++++E+ GG V ++ R + E + + RQ++ A+
Sbjct: 71 ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEAL 130
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPEL 582
+ H K+IIHRDLKA N+L+ E +I++ADFG S + K D+F G+P + APE+
Sbjct: 131 NFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEV 188
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 110/197 (55%), Gaps = 8/197 (4%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++++ +G G F KV AK+ TG A K+I+ + L+ E+ I+ DHP I
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYI 70
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKKI 166
VKL + L++++E+ GG V ++ R + E + + RQ++ A+ + H K+I
Sbjct: 71 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI 130
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKY-DGP 224
IHRDLKA N+L+ E +I++ADFG S + K D+F G+P + APE+ + D P
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 225 ---EVDVWSLGVILYTL 238
+ D+WSLG+ L +
Sbjct: 191 YDYKADIWSLGITLIEM 207
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAV 525
A+ ++KL + L++++E+ GG V ++ R + E + + RQ++ A+
Sbjct: 63 ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEAL 122
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPEL 582
+ H K+IIHRDLKA N+L+ E +I++ADFG S + K D+F G+P + APE+
Sbjct: 123 NFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEV 180
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 16/255 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMKMLDH 104
+Y+L + +G G ++V LA+ + ++VA+K++ + L +P + RE + L+H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNH 71
Query: 105 PNIVKLFQVIETEKTL----YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
P IV ++ E E Y+VMEY G + D + G M K A A+ +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLD---TFCGSPPYAAPELF 216
HQ IIHRD+K N+++ + +K+ DFG + GN + G+ Y +PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFY----MSTDC 272
+G D DV+SLG +LY +++G PF G + + + +R P +S D
Sbjct: 192 RGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADL 250
Query: 273 ENLLKKFLVLNPAKR 287
+ ++ K L NP R
Sbjct: 251 DAVVLKALAKNPENR 265
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
Y+VMEY G + D + G M K A A+ + HQ IIHRD+K N+++ +
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 548 EMNIKIADFGFSNEFT-PGNKLD---TFCGSPPYAAPELFQG 585
+K+ DFG + GN + G+ Y +PE +G
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 1/204 (0%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY+ L +G+G++ V ++ TG+ VAIK ++ + + RE++++K L H N
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
+V L +V + +K YLV E+ + D + + + + QI++ + +CH I
Sbjct: 86 LVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNI 145
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
IHRD+K EN+L+ +K+ DFGF+ PG D + Y APEL G G
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKA 205
Query: 226 VDVWSLGVILYTLVSGSLPFDGST 249
VDVW++G ++ + G F G +
Sbjct: 206 VDVWAIGCLVTEMFMGEPLFPGDS 229
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
E L+ L +V + +K YLV E+ + D + + + + QI++ + +CH
Sbjct: 84 ENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH 143
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
IIHRD+K EN+L+ +K+ DFGF+ PG D + Y APEL G
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVG 198
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 130/247 (52%), Gaps = 11/247 (4%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG-SLQKLFREVRIMKMLDHPNIVK 109
+ +G+G F +V + TGK A K ++K +L Q E +I+ + IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 110 LFQVIETEKTLYLVMEYASGGEV--FDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQKK 165
L ET+ L LVM +GG++ Y V +E RA F QIVS +++ HQ+
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGKKYDGP 224
II+RDLK EN+LLD + N++I+D G + E G K + G+P + APEL G++YD
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF- 368
Query: 225 EVDVWSLGVILYTLVSGSLPF--DGSTL--RELRERVLRGKYRIPFYMSTDCENLLKKFL 280
VD ++LGV LY +++ PF G + +EL++RVL P S ++ + L
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALL 428
Query: 281 VLNPAKR 287
+P KR
Sbjct: 429 QKDPEKR 435
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEV--FDYLVLHGRMKEKEARAKFR--QIVSAVQYCH 529
++ L ET+ L LVM +GG++ Y V +E RA F QIVS +++ H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQG 585
Q+ II+RDLK EN+LLD + N++I+D G + E G K + G+P + APEL G
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 130/247 (52%), Gaps = 11/247 (4%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG-SLQKLFREVRIMKMLDHPNIVK 109
+ +G+G F +V + TGK A K ++K +L Q E +I+ + IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 110 LFQVIETEKTLYLVMEYASGGEV--FDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQKK 165
L ET+ L LVM +GG++ Y V +E RA F QIVS +++ HQ+
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGKKYDGP 224
II+RDLK EN+LLD + N++I+D G + E G K + G+P + APEL G++YD
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF- 368
Query: 225 EVDVWSLGVILYTLVSGSLPF--DGSTL--RELRERVLRGKYRIPFYMSTDCENLLKKFL 280
VD ++LGV LY +++ PF G + +EL++RVL P S ++ + L
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALL 428
Query: 281 VLNPAKR 287
+P KR
Sbjct: 429 QKDPEKR 435
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEV--FDYLVLHGRMKEKEARAKFR--QIVSAVQYCH 529
++ L ET+ L LVM +GG++ Y V +E RA F QIVS +++ H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQG 585
Q+ II+RDLK EN+LLD + N++I+D G + E G K + G+P + APEL G
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 16/255 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMKMLDH 104
+Y+L + +G G ++V LA+ + ++VA+K++ + L +P + RE + L+H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNH 71
Query: 105 PNIVKLFQVIETEKTL----YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
P IV ++ E E Y+VMEY G + D + G M K A A+ +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLD---TFCGSPPYAAPELF 216
HQ IIHRD+K N+++ + +K+ DFG + GN + G+ Y +PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFY----MSTDC 272
+G D DV+SLG +LY +++G PF G + + + +R P +S D
Sbjct: 192 RGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 250
Query: 273 ENLLKKFLVLNPAKR 287
+ ++ K L NP R
Sbjct: 251 DAVVLKALAKNPENR 265
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
Y+VMEY G + D + G M K A A+ + HQ IIHRD+K N+++ +
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 548 EMNIKIADFGFSNEFT-PGNKLD---TFCGSPPYAAPELFQG 585
+K+ DFG + GN + G+ Y +PE +G
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 130/247 (52%), Gaps = 11/247 (4%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG-SLQKLFREVRIMKMLDHPNIVK 109
+ +G+G F +V + TGK A K ++K +L Q E +I+ + IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 110 LFQVIETEKTLYLVMEYASGGEV--FDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQKK 165
L ET+ L LVM +GG++ Y V +E RA F QIVS +++ HQ+
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGKKYDGP 224
II+RDLK EN+LLD + N++I+D G + E G K + G+P + APEL G++YD
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF- 368
Query: 225 EVDVWSLGVILYTLVSGSLPF--DGSTL--RELRERVLRGKYRIPFYMSTDCENLLKKFL 280
VD ++LGV LY +++ PF G + +EL++RVL P S ++ + L
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALL 428
Query: 281 VLNPAKR 287
+P KR
Sbjct: 429 QKDPEKR 435
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEV--FDYLVLHGRMKEKEARAKFR--QIVSAVQYCH 529
++ L ET+ L LVM +GG++ Y V +E RA F QIVS +++ H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQG 585
Q+ II+RDLK EN+LLD + N++I+D G + E G K + G+P + APEL G
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 116/218 (53%), Gaps = 17/218 (7%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KLL+TIGKG F V L + G +VA+K I N + Q E +M L H N+V
Sbjct: 196 KLLQTIGKGEFGDVMLGDY--RGNKVAVKCIK----NDATAQAFLAEASVMTQLRHSNLV 249
Query: 109 KLFQVIETEKT-LYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFR-QIVSAVQYCHQKK 165
+L VI EK LY+V EY + G + DYL GR + + KF + A++Y
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 309
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKYDG 223
+HRDL A N+L+ + K++DFG + E + DT G P + APE + KK+
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--DT--GKLPVKWTAPEALREKKF-S 364
Query: 224 PEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
+ DVWS G++L+ + S G +P+ L+++ RV +G
Sbjct: 365 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG 402
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 474 LLKLFQVIETEKT-LYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFR-QIVSAVQYCHQ 530
L++L VI EK LY+V EY + G + DYL GR + + KF + A++Y
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
+HRDL A N+L+ + K++DFG + E
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 338
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 130/247 (52%), Gaps = 11/247 (4%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG-SLQKLFREVRIMKMLDHPNIVK 109
+ +G+G F +V + TGK A K ++K +L Q E +I+ + IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 110 LFQVIETEKTLYLVMEYASGGEV--FDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQKK 165
L ET+ L LVM +GG++ Y V +E RA F QIVS +++ HQ+
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGKKYDGP 224
II+RDLK EN+LLD + N++I+D G + E G K + G+P + APEL G++YD
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF- 368
Query: 225 EVDVWSLGVILYTLVSGSLPF--DGSTL--RELRERVLRGKYRIPFYMSTDCENLLKKFL 280
VD ++LGV LY +++ PF G + +EL++RVL P S ++ + L
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALL 428
Query: 281 VLNPAKR 287
+P KR
Sbjct: 429 QKDPEKR 435
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEV--FDYLVLHGRMKEKEARAKFR--QIVSAVQYCH 529
++ L ET+ L LVM +GG++ Y V +E RA F QIVS +++ H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQG 585
Q+ II+RDLK EN+LLD + N++I+D G + E G K + G+P + APEL G
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 16/255 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMKMLDH 104
+Y+L + +G G ++V LA+ + ++VA+K++ + L +P + RE + L+H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNH 71
Query: 105 PNIVKLFQVIETEKTL----YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
P IV ++ E E Y+VMEY G + D + G M K A A+ +
Sbjct: 72 PAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLD---TFCGSPPYAAPELF 216
HQ IIHRD+K N+++ + +K+ DFG + GN + G+ Y +PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFY----MSTDC 272
+G D DV+SLG +LY +++G PF G + + + +R P +S D
Sbjct: 192 RGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 250
Query: 273 ENLLKKFLVLNPAKR 287
+ ++ K L NP R
Sbjct: 251 DAVVLKALAKNPENR 265
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
Y+VMEY G + D + G M K A A+ + HQ IIHRD+K N+++ +
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 548 EMNIKIADFGFSNEFT-PGNKLD---TFCGSPPYAAPELFQG 585
+K+ DFG + GN + G+ Y +PE +G
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 16/255 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMKMLDH 104
+Y+L + +G G ++V LA+ + ++VA+K++ + L +P + RE + L+H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNH 71
Query: 105 PNIVKLFQVIETEKTL----YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
P IV ++ E E Y+VMEY G + D + G M K A A+ +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLD---TFCGSPPYAAPELF 216
HQ IIHRD+K N+++ + +K+ DFG + GN + G+ Y +PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFY----MSTDC 272
+G D DV+SLG +LY +++G PF G + + + +R P +S D
Sbjct: 192 RGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 250
Query: 273 ENLLKKFLVLNPAKR 287
+ ++ K L NP R
Sbjct: 251 DAVVLKALAKNPENR 265
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
Y+VMEY G + D + G M K A A+ + HQ IIHRD+K N+++ +
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 548 EMNIKIADFGFSNEFT-PGNKLD---TFCGSPPYAAPELFQG 585
+K+ DFG + GN + G+ Y +PE +G
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 116/218 (53%), Gaps = 17/218 (7%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KLL+TIGKG F V L + G +VA+K I N + Q E +M L H N+V
Sbjct: 24 KLLQTIGKGEFGDVMLGDY--RGNKVAVKCIK----NDATAQAFLAEASVMTQLRHSNLV 77
Query: 109 KLFQVIETEKT-LYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFR-QIVSAVQYCHQKK 165
+L VI EK LY+V EY + G + DYL GR + + KF + A++Y
Sbjct: 78 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 137
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKYDG 223
+HRDL A N+L+ + K++DFG + E + DT G P + APE + KK+
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--DT--GKLPVKWTAPEALREKKF-S 192
Query: 224 PEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
+ DVWS G++L+ + S G +P+ L+++ RV +G
Sbjct: 193 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG 230
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 474 LLKLFQVIETEKT-LYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFR-QIVSAVQYCHQ 530
L++L VI EK LY+V EY + G + DYL GR + + KF + A++Y
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
+HRDL A N+L+ + K++DFG + E
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 166
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 4/195 (2%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 110
L+ IGKG+F +V T + VAIKIID + +E+ ++ D + K
Sbjct: 28 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSSYVTKY 86
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 170
+ L+++MEY GG D L+ G E + ++I+ + Y H +K IHRD
Sbjct: 87 YGSYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRD 145
Query: 171 LKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGKKYDGPEVDVW 229
+KA N+LL + ++K+ADFG + + T K +TF G+P + APE+ Q YD + D+W
Sbjct: 146 IKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDS-KADIW 204
Query: 230 SLGVILYTLVSGSLP 244
SLG+ L G P
Sbjct: 205 SLGITAIELAKGEPP 219
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
L+++MEY GG D L+ G E + ++I+ + Y H +K IHRD+KA N+LL
Sbjct: 96 LWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS 154
Query: 547 SEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGGA 587
+ ++K+ADFG + + T K +TF G+P + APE+ Q A
Sbjct: 155 EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSA 196
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 113/215 (52%), Gaps = 9/215 (4%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVK 109
LLK +G G F VKL K +VA+K+I + + S + F+E + M L HP +VK
Sbjct: 12 LLKELGSGQFGVVKLGKW-KGQYDVAVKMIKEGSM---SEDEFFQEAQTMMKLSHPKLVK 67
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKKIIH 168
+ V E +Y+V EY S G + +YL HG+ ++ + + + + + IH
Sbjct: 68 FYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIH 127
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKYDGPEV 226
RDL A N L+D ++ +K++DFG + + + P ++APE+F KY
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS- 186
Query: 227 DVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
DVW+ G++++ + S G +P+D T E+ +V +G
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG 221
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKK 532
L+K + V E +Y+V EY S G + +YL HG+ ++ + + + + +
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ 124
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQ 584
IHRDL A N L+D ++ +K++DFG + + + P ++APE+F
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFH 178
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 4/195 (2%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 110
L IGKG+F +V T + VAIKIID + +E+ ++ D P I +
Sbjct: 24 LDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYITRY 82
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 170
F L+++MEY GG D L+ G ++E R+I+ + Y H ++ IHRD
Sbjct: 83 FGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRD 141
Query: 171 LKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGKKYDGPEVDVW 229
+KA N+LL + ++K+ADFG + + T K + F G+P + APE+ + YD + D+W
Sbjct: 142 IKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDF-KADIW 200
Query: 230 SLGVILYTLVSGSLP 244
SLG+ L G P
Sbjct: 201 SLGITAIELAKGEPP 215
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
L+++MEY GG D L+ G ++E R+I+ + Y H ++ IHRD+KA N+LL
Sbjct: 92 LWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS 150
Query: 547 SEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGGA 587
+ ++K+ADFG + + T K + F G+P + APE+ + A
Sbjct: 151 EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA 192
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 116/218 (53%), Gaps = 17/218 (7%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KLL+TIGKG F V L + G +VA+K I N + Q E +M L H N+V
Sbjct: 9 KLLQTIGKGEFGDVMLGDY--RGNKVAVKCIK----NDATAQAFLAEASVMTQLRHSNLV 62
Query: 109 KLFQVIETEKT-LYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFR-QIVSAVQYCHQKK 165
+L VI EK LY+V EY + G + DYL GR + + KF + A++Y
Sbjct: 63 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 122
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKYDG 223
+HRDL A N+L+ + K++DFG + E + DT G P + APE + KK+
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--DT--GKLPVKWTAPEALREKKF-S 177
Query: 224 PEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
+ DVWS G++L+ + S G +P+ L+++ RV +G
Sbjct: 178 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG 215
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 474 LLKLFQVIETEKT-LYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFR-QIVSAVQYCHQ 530
L++L VI EK LY+V EY + G + DYL GR + + KF + A++Y
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
+HRDL A N+L+ + K++DFG + E
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 151
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 7/208 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
++K L+ +G G +A V + TG VA+K + K G+ RE+ +MK L H N
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV-KLDSEEGTPSTAIREISLMKELKHEN 64
Query: 107 IVKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHG--RMKEKEARAKFR-QIVSAVQYC 161
IV+L+ VI TE L LV E+ + D + R E F+ Q++ + +C
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKK 220
H+ KI+HRDLK +NLL++ +K+ DFG + F P N + + Y AP++ G +
Sbjct: 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSR 184
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGS 248
+D+WS G IL +++G F G+
Sbjct: 185 TYSTSIDIWSCGCILAEMITGKPLFPGT 212
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGG--EVFDYLVLHG--RMKEKEARAKFR-QIVSAVQ 526
E +++L+ VI TE L LV E+ + D + R E F+ Q++ +
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 527 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+CH+ KI+HRDLK +NLL++ +K+ DFG + F P N + + Y AP++ G
Sbjct: 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 586 GAPVTSS 592
++S
Sbjct: 183 SRTYSTS 189
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 4/214 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y L +G+G +A V K T VA+K I + + G+ REV ++K L H NI
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEI-RLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR-QIVSAVQYCHQKKI 166
V L +I TEK+L LV EY ++ YL G + F Q++ + YCH++K+
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV 121
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSN-EFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
+HRDLK +NLL++ +K+ADFG + + P D + Y P++ G +
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQ 181
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+D+W +G I Y + +G F GST+ E + R
Sbjct: 182 IDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFR 215
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR-QIVSAVQYCHQKK 532
++ L +I TEK+L LV EY ++ YL G + F Q++ + YCH++K
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSN-EFTPGNKLDTFCGSPPYAAPELFQG 585
++HRDLK +NLL++ +K+ADFG + + P D + Y P++ G
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG 174
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 125/256 (48%), Gaps = 18/256 (7%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMKMLDH 104
+Y+L + +G G ++V LA+ + ++VA+K++ + L +P + RE + L+H
Sbjct: 30 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNH 88
Query: 105 PNIVKLFQVIETEKTL----YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
P IV ++ E E Y+VMEY G + D + G M K A A+ +
Sbjct: 89 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 148
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLD---TFCGSPPYAAPELF 216
HQ IIHRD+K N+++ + +K+ DFG + GN + G+ Y +PE
Sbjct: 149 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 208
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST-----LRELRERVLRGKYRIPFYMSTD 271
+G D DV+SLG +LY +++G PF G + + +RE + R +S D
Sbjct: 209 RGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG-LSAD 266
Query: 272 CENLLKKFLVLNPAKR 287
+ ++ K L NP R
Sbjct: 267 LDAVVLKALAKNPENR 282
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
Y+VMEY G + D + G M K A A+ + HQ IIHRD+K N+++ +
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 168
Query: 548 EMNIKIADFGFSNEFT-PGNKLD---TFCGSPPYAAPELFQG 585
+K+ DFG + GN + G+ Y +PE +G
Sbjct: 169 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 210
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 103/203 (50%), Gaps = 18/203 (8%)
Query: 105 PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAV 158
P+IV++ V E K L +V E GGE+F + G E+EA + I A+
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAI 174
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
QY H I HRD+K ENLL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 234
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLREL----RERVLRGKYRIP----FY 267
+KYD D WSLGVI Y L+ G PF + + + R+ G+Y P
Sbjct: 235 LGPEKYDK-SCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSE 293
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
+S + + L++ L P +R ++
Sbjct: 294 VSEEVKXLIRNLLKTEPTQRXTI 316
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
K L +V E GGE+F + G E+EA + I A+QY H I HRD+K EN
Sbjct: 132 KCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPEN 191
Query: 543 LLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
LL S+ +K+ DFGF+ E T N L T C +P Y APE+
Sbjct: 192 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 235
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 115/221 (52%), Gaps = 19/221 (8%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ KY+ L IG+G F +V A+H TG++VA+K + G RE++I+++L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 105 PNIVKLFQVIETEK--------TLYLVMEYAS---GGEVFDYLVLHGRMKEKEARAKFRQ 153
N+V L ++ T+ ++YLV ++ G + + LV + E + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQM 133
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-----NKLDTFCGSP 208
+++ + Y H+ KI+HRD+KA N+L+ + +K+ADFG + F+ N+ +
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y PEL G++ GP +D+W G I+ + + S G+T
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 486 TLYLVMEYAS---GGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
++YLV ++ G + + LV + E + + +++ + Y H+ KI+HRD+KA N
Sbjct: 99 SIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN 155
Query: 543 LLLDSEMNIKIADFGFSNEFTPG-----NKLDTFCGSPPYAAPELFQG----GAPVTSSG 593
+L+ + +K+ADFG + F+ N+ + Y PEL G G P+
Sbjct: 156 VLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPI-DLW 214
Query: 594 GAGTNHTHNSSISP 607
GAG + SP
Sbjct: 215 GAGCIMAEMWTRSP 228
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 114/218 (52%), Gaps = 17/218 (7%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KLL+TIGKG F V L + G +VA+K I N + Q E +M L H N+V
Sbjct: 15 KLLQTIGKGEFGDVMLGDY--RGNKVAVKCIK----NDATAQAFLAEASVMTQLRHSNLV 68
Query: 109 KLFQVIETEKT-LYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFR-QIVSAVQYCHQKK 165
+L VI EK LY+V EY + G + DYL GR + + KF + A++Y
Sbjct: 69 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 128
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKYDG 223
+HRDL A N+L+ + K++DFG + E + DT G P + APE + +
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--DT--GKLPVKWTAPEALREAAFS- 183
Query: 224 PEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
+ DVWS G++L+ + S G +P+ L+++ RV +G
Sbjct: 184 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG 221
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 474 LLKLFQVIETEKT-LYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFR-QIVSAVQYCHQ 530
L++L VI EK LY+V EY + G + DYL GR + + KF + A++Y
Sbjct: 67 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGGAP 588
+HRDL A N+L+ + K++DFG + E + DT G P + APE + A
Sbjct: 127 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--DT--GKLPVKWTAPEALREAAF 182
Query: 589 VTSS 592
T S
Sbjct: 183 STKS 186
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 103/200 (51%), Gaps = 10/200 (5%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT-QLNPGSLQKLFREVRIMKMLDHPNIVK 109
L+ IG G+F V A+ V + VAIK + + + + Q + +EVR ++ L HPN ++
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKKIIH 168
E T +LVMEY G D L +H + ++E E A + + Y H +IH
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSAS-DLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 177
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK---KYDGPE 225
RD+KA N+LL +K+ DFG ++ P N F G+P + APE+ +YDG +
Sbjct: 178 RDVKAGNILLSEPGLVKLGDFGSASIMAPAN---XFVGTPYWMAPEVILAMDEGQYDG-K 233
Query: 226 VDVWSLGVILYTLVSGSLPF 245
VDVWSLG+ L P
Sbjct: 234 VDVWSLGITCIELAERKPPL 253
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 484 EKTLYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
E T +LVMEY G D L +H + ++E E A + + Y H +IHRD+KA N
Sbjct: 126 EHTAWLVMEYCLGSAS-DLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN 184
Query: 543 LLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
+LL +K+ DFG ++ P N F G+P + APE+
Sbjct: 185 ILLSEPGLVKLGDFGSASIMAPAN---XFVGTPYWMAPEVI 222
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 10/210 (4%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A G VA+K + + N ++ +RE+ ++K ++H
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 105 PNIVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 158
NI+ L V +KTL YLVME V+H + + Q++ +
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC---QVIHMELDHERMSYLLYQMLCGI 137
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 218
++ H IIHRDLK N+++ S+ +KI DFG + + + + + Y APE+ G
Sbjct: 138 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILG 197
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGS 248
Y VD+WS+G I+ LV GS+ F G+
Sbjct: 198 MGY-KENVDIWSVGCIMGELVKGSVIFQGT 226
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 473 TLLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 529
+LL +F + +E + +YLVME V+H + + Q++ +++ H
Sbjct: 85 SLLNVFTPQKTLEEFQDVYLVMELMDANLC---QVIHMELDHERMSYLLYQMLCGIKHLH 141
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IIHRDLK N+++ S+ +KI DFG + + + + + Y APE+ G
Sbjct: 142 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILG 197
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 103/200 (51%), Gaps = 10/200 (5%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT-QLNPGSLQKLFREVRIMKMLDHPNIVK 109
L+ IG G+F V A+ V + VAIK + + + + Q + +EVR ++ L HPN ++
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKKIIH 168
E T +LVMEY G D L +H + ++E E A + + Y H +IH
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSAS-DLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 138
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK---KYDGPE 225
RD+KA N+LL +K+ DFG ++ P N F G+P + APE+ +YDG +
Sbjct: 139 RDVKAGNILLSEPGLVKLGDFGSASIMAPAN---XFVGTPYWMAPEVILAMDEGQYDG-K 194
Query: 226 VDVWSLGVILYTLVSGSLPF 245
VDVWSLG+ L P
Sbjct: 195 VDVWSLGITCIELAERKPPL 214
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 484 EKTLYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
E T +LVMEY G D L +H + ++E E A + + Y H +IHRD+KA N
Sbjct: 87 EHTAWLVMEYCLGSAS-DLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN 145
Query: 543 LLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
+LL +K+ DFG ++ P N F G+P + APE+
Sbjct: 146 ILLSEPGLVKLGDFGSASIMAPAN---XFVGTPYWMAPEVI 183
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 115/221 (52%), Gaps = 19/221 (8%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ KY+ L IG+G F +V A+H TG++VA+K + G RE++I+++L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 105 PNIVKLFQVIETEK--------TLYLVMEYAS---GGEVFDYLVLHGRMKEKEARAKFRQ 153
N+V L ++ T+ ++YLV ++ G + + LV + E + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQM 133
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-----NKLDTFCGSP 208
+++ + Y H+ KI+HRD+KA N+L+ + +K+ADFG + F+ N+ +
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y PEL G++ GP +D+W G I+ + + S G+T
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 486 TLYLVMEYAS---GGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
++YLV ++ G + + LV + E + + +++ + Y H+ KI+HRD+KA N
Sbjct: 99 SIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN 155
Query: 543 LLLDSEMNIKIADFGFSNEFTPG-----NKLDTFCGSPPYAAPELFQG----GAPVTSSG 593
+L+ + +K+ADFG + F+ N+ + Y PEL G G P+
Sbjct: 156 VLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPI-DLW 214
Query: 594 GAGTNHTHNSSISP 607
GAG + SP
Sbjct: 215 GAGCIMAEMWTRSP 228
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 2/217 (0%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ KY+ L+ IG+G + V AK+ T + VA+K + + G RE+ ++K L H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NIV+L V+ ++K L LV E+ + +G + + ++ Q++ + +CH +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDG 223
++HRDLK +NLL++ +K+ADFG + F P + Y P++ G K
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 224 PEVDVWSLGVILYTLVSGSLP-FDGSTLRELRERVLR 259
+D+WS G I L + + P F G+ + + +R+ R
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFR 217
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 52/91 (57%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
+ +++L V+ ++K L LV E+ + +G + + ++ Q++ + +CH +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
++HRDLK +NLL++ +K+ADFG + F
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLARAF 151
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 115/221 (52%), Gaps = 19/221 (8%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ KY+ L IG+G F +V A+H TG++VA+K + G RE++I+++L H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 105 PNIVKLFQVIETEK--------TLYLVMEYAS---GGEVFDYLVLHGRMKEKEARAKFRQ 153
N+V L ++ T+ ++YLV ++ G + + LV + E + +
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQM 132
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-----NKLDTFCGSP 208
+++ + Y H+ KI+HRD+KA N+L+ + +K+ADFG + F+ N+ +
Sbjct: 133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 192
Query: 209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y PEL G++ GP +D+W G I+ + + S G+T
Sbjct: 193 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 233
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 486 TLYLVMEYAS---GGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
++YLV ++ G + + LV + E + + +++ + Y H+ KI+HRD+KA N
Sbjct: 98 SIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN 154
Query: 543 LLLDSEMNIKIADFGFSNEFTPG-----NKLDTFCGSPPYAAPELFQG----GAPVTSSG 593
+L+ + +K+ADFG + F+ N+ + Y PEL G G P+
Sbjct: 155 VLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPI-DLW 213
Query: 594 GAGTNHTHNSSISP 607
GAG + SP
Sbjct: 214 GAGCIMAEMWTRSP 227
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 115/221 (52%), Gaps = 19/221 (8%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ KY+ L IG+G F +V A+H TG++VA+K + G RE++I+++L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 105 PNIVKLFQVIET--------EKTLYLVMEYAS---GGEVFDYLVLHGRMKEKEARAKFRQ 153
N+V L ++ T + ++YLV ++ G + + LV + E + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQM 133
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-----NKLDTFCGSP 208
+++ + Y H+ KI+HRD+KA N+L+ + +K+ADFG + F+ N+ +
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y PEL G++ GP +D+W G I+ + + S G+T
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 486 TLYLVMEYAS---GGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
++YLV ++ G + + LV + E + + +++ + Y H+ KI+HRD+KA N
Sbjct: 99 SIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN 155
Query: 543 LLLDSEMNIKIADFGFSNEFTPG-----NKLDTFCGSPPYAAPELFQG----GAPVTSSG 593
+L+ + +K+ADFG + F+ N+ + Y PEL G G P+
Sbjct: 156 VLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPI-DLW 214
Query: 594 GAGTNHTHNSSISP 607
GAG + SP
Sbjct: 215 GAGCIMAEMWTRSP 228
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 10/210 (4%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A G VA+K + + N ++ +RE+ ++K ++H
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 158
NI+ L V +KTL YLVME V+H + + Q++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC---QVIHMELDHERMSYLLYQMLCGI 139
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 218
++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILG 199
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGS 248
Y VD+WS+G I+ LV G + F G+
Sbjct: 200 MGY-AANVDIWSVGCIMGELVKGCVIFQGT 228
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 473 TLLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 529
+LL +F + +E + +YLVME V+H + + Q++ +++ H
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLC---QVIHMELDHERMSYLLYQMLCGIKHLH 143
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILG 199
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 119/234 (50%), Gaps = 35/234 (14%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG--SLQKLFREVRIMKMLDHPN 106
KL+K +G G F +V + + + K VA+K L PG S+Q E +MK L H
Sbjct: 16 KLVKRLGAGQFGEVWMGYYNNSTK-VAVK-----TLKPGTMSVQAFLEEANLMKTLQHDK 69
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYL-------VLHGRMKEKEARAKFRQIVSAVQ 159
+V+L+ V+ E+ +Y++ EY + G + D+L VL ++ + A QI +
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA-----QIAEGMA 124
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAA 212
Y +K IHRDL+A N+L+ + KIADFG + NE+T G K +P
Sbjct: 125 YIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 184
Query: 213 PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
F K DVWS G++LY +V+ G +P+ G T ++ + +G YR+P
Sbjct: 185 FGCFTIKS------DVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQG-YRMP 231
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 17/104 (16%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYL-------VLHGRMKEKEARAKFRQIVSA 524
+ L++L+ V+ E+ +Y++ EY + G + D+L VL ++ + A QI
Sbjct: 68 DKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA-----QIAEG 122
Query: 525 VQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ Y +K IHRDL+A N+L+ + KIADFG + NE+T
Sbjct: 123 MAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 166
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 117/244 (47%), Gaps = 29/244 (11%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
D + KY+L+K +GKG + V + TG+ VA+K I N Q+ FRE+ I+
Sbjct: 4 DRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILT 63
Query: 101 MLD-HPNIVKLFQVI--ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK-EARAKFRQIVS 156
L H NIV L V+ + ++ +YLV +Y E + V+ + E + Q++
Sbjct: 64 ELSGHENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVHKQYVVYQLIK 120
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---------------- 200
++Y H ++HRD+K N+LL++E ++K+ADFG S F +
Sbjct: 121 VIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 201 ------LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELR 254
L + + Y APE+ G +D+WSLG IL ++ G F GS+
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240
Query: 255 ERVL 258
ER++
Sbjct: 241 ERII 244
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 469 SGGETLLKLFQVI--ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK-EARAKFRQIVSAV 525
SG E ++ L V+ + ++ +YLV +Y E + V+ + E + Q++ +
Sbjct: 66 SGHENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVHKQYVVYQLIKVI 122
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
+Y H ++HRD+K N+LL++E ++K+ADFG S F
Sbjct: 123 KYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 117/249 (46%), Gaps = 16/249 (6%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLF 111
+ IG+GNF +V + VA+K +T L P K +E RI+K HPNIV+L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 112 QVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRD 170
V ++ +Y+VME GG+ +L G R++ K + ++Y K IHRD
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRD 238
Query: 171 LKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGS-------PPYAAPELFQGKKYDG 223
L A N L+ + +KI+DFG S E G + S + APE +Y
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADG----VYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 224 PEVDVWSLGVILY-TLVSGSLPFDGSTLRELRERVLR-GKYRIPFYMSTDCENLLKKFLV 281
E DVWS G++L+ T G+ P+ + ++ RE V + G+ P L+++
Sbjct: 295 -ESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWA 353
Query: 282 LNPAKRASL 290
P +R S
Sbjct: 354 YEPGQRPSF 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V ++ +Y+VME GG+ +L G R++ K + ++Y K
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG 565
IHRDL A N L+ + +KI+DFG S E G
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 117/245 (47%), Gaps = 8/245 (3%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLF 111
+ IG+GNF +V + VA+K +T L P K +E RI+K HPNIV+L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 112 QVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRD 170
V ++ +Y+VME GG+ +L G R++ K + ++Y K IHRD
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRD 238
Query: 171 LKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT--FCGSP-PYAAPELFQGKKYDGPEVD 227
L A N L+ + +KI+DFG S E G + P + APE +Y E D
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS-ESD 297
Query: 228 VWSLGVILY-TLVSGSLPFDGSTLRELRERVLR-GKYRIPFYMSTDCENLLKKFLVLNPA 285
VWS G++L+ T G+ P+ + ++ RE V + G+ P L+++ P
Sbjct: 298 VWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPG 357
Query: 286 KRASL 290
+R S
Sbjct: 358 QRPSF 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V ++ +Y+VME GG+ +L G R++ K + ++Y K
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG 565
IHRDL A N L+ + +KI+DFG S E G
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 125/247 (50%), Gaps = 6/247 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ + +G GN V H P+G +A K+I ++ P ++ RE++++ + P I
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KI 166
V + ++ + + ME+ GG + L GR+ E+ ++ + Y +K KI
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 129
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
+HRD+K N+L++S IK+ DFG S + + F G+ Y +PE QG Y +
Sbjct: 130 MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DEMANEFVGTRSYMSPERLQGTHYS-VQS 187
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVL-RGKYRIP-FYMSTDCENLLKKFLVLNP 284
D+WS+G+ L + G P + EL + ++ ++P S + ++ + K L+ NP
Sbjct: 188 DIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNP 247
Query: 285 AKRASLE 291
A+RA L+
Sbjct: 248 AERADLK 254
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-K 532
++ + ++ + + ME+ GG + L GR+ E+ ++ + Y +K K
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 128
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
I+HRD+K N+L++S IK+ DFG S + + F G+ Y +PE QG
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DEMANEFVGTRSYMSPERLQG 180
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 111/217 (51%), Gaps = 2/217 (0%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ KY+ L+ IG+G + V AK+ T + VA+K + + G RE+ ++K L H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NIV+L V+ ++K L LV E+ + +G + + ++ Q++ + +CH +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDG 223
++HRDLK +NLL++ +K+A+FG + F P + Y P++ G K
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 224 PEVDVWSLGVILYTLVSGSLP-FDGSTLRELRERVLR 259
+D+WS G I L + P F G+ + + +R+ R
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR 217
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 52/91 (57%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
+ +++L V+ ++K L LV E+ + +G + + ++ Q++ + +CH +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
++HRDLK +NLL++ +K+A+FG + F
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAF 151
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G+ + + IG G+F V K +VA+K+++ T P LQ EV +++ H
Sbjct: 36 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 92
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NI+ LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K
Sbjct: 93 NIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 151
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNE---FTPGNKLDTFCGSPPYAAPEL--FQGK 219
IIHRDLK+ N+ L ++ +KI DFG + E ++ ++ + GS + APE+ Q K
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF 245
+ DV++ G++LY L++G LP+
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPY 237
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K IIH
Sbjct: 96 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNE---FTPGNKLDTFCGSPPYAAPELFQ 584
RDLK+ N+ L ++ +KI DFG + E ++ ++ + GS + APE+ +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 131/263 (49%), Gaps = 40/263 (15%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+L+K +G G F +V + K VAIK + ++P S E +IMK L H +V
Sbjct: 12 QLIKRLGNGQFGEVWMGTWNGNTK-VAIKTLKPGTMSPESF---LEEAQIMKKLKHDKLV 67
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARA--------KFRQIVSAVQY 160
+L+ V+ +E+ +Y+V EY + G + D+L K+ E RA Q+ + + Y
Sbjct: 68 QLYAVV-SEEPIYIVTEYMNKGSLLDFL------KDGEGRALKLPNLVDMAAQVAAGMAY 120
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAP 213
+ IHRDL++ N+L+ + + KIADFG + NE T G K +P A
Sbjct: 121 IERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 180
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDC 272
F K DVWS G++L LV+ G +P+ G RE+ E+V RG YR+P DC
Sbjct: 181 GRFTIKS------DVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-YRMP--CPQDC 231
Query: 273 ENLLKKFLV----LNPAKRASLE 291
L + ++ +P +R + E
Sbjct: 232 PISLHELMIHCWKKDPEERPTFE 254
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 15/96 (15%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARA--------KFRQIVS 523
+ L++L+ V+ +E+ +Y+V EY + G + D+L K+ E RA Q+ +
Sbjct: 64 DKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFL------KDGEGRALKLPNLVDMAAQVAA 116
Query: 524 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
+ Y + IHRDL++ N+L+ + + KIADFG +
Sbjct: 117 GMAYIERMNYIHRDLRSANILVGNGLICKIADFGLA 152
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G+ + + IG G+F V K +VA+K+++ T P LQ EV +++ H
Sbjct: 28 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 84
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NI+ LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K
Sbjct: 85 NIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 143
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNE---FTPGNKLDTFCGSPPYAAPEL--FQGK 219
IIHRDLK+ N+ L ++ +KI DFG + E ++ ++ + GS + APE+ Q K
Sbjct: 144 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 203
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF 245
+ DV++ G++LY L++G LP+
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQLPY 229
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K IIH
Sbjct: 88 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 147
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNE---FTPGNKLDTFCGSPPYAAPELFQ 584
RDLK+ N+ L ++ +KI DFG + E ++ ++ + GS + APE+ +
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 121/234 (51%), Gaps = 35/234 (14%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG--SLQKLFREVRIMKMLDHPN 106
KL+K +G G F +V + + + K VA+K L PG S+Q E +MK L H
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNSTK-VAVK-----TLKPGTMSVQAFLEEANLMKTLQHDK 68
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYL-------VLHGRMKEKEARAKFRQIVSAVQ 159
+V+L+ V+ E+ +Y++ E+ + G + D+L VL ++ + A QI +
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSA-----QIAEGMA 123
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAA 212
Y +K IHRDL+A N+L+ + KIADFG + NE+T G K + A
Sbjct: 124 YIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-----KWTA 178
Query: 213 PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
PE + + +VWS G++LY +V+ G +P+ G T ++ + +G YR+P
Sbjct: 179 PEAINFGCFT-IKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQG-YRMP 230
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 17/104 (16%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYL-------VLHGRMKEKEARAKFRQIVSA 524
+ L++L+ V+ E+ +Y++ E+ + G + D+L VL ++ + A QI
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSA-----QIAEG 121
Query: 525 VQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ Y +K IHRDL+A N+L+ + KIADFG + NE+T
Sbjct: 122 MAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 165
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +KTL YLVME A+ +V + H RM Q++
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 175
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 235
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 236 LGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 287
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 288 KK---LQPTVRNYVE 299
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 473 TLLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
+LL +F + +E + +YLVME A+ +V + H RM Q++ +++
Sbjct: 125 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKH 179
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 237
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Query: 49 KLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+ I+K L H
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQH 73
Query: 105 PNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYC 161
NIVK V + + L L+MEY G + DYL H R+ + QI ++Y
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL 133
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----YAAPELF 216
K+ IHRDL N+L+++E +KI DFG + + P +K P + APE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS 240
K+ DVWS GV+LY L +
Sbjct: 193 TESKFSVAS-DVWSFGVVLYELFT 215
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L L+MEY G + DYL H R+ + QI ++Y K+ IHRDL N+
Sbjct: 89 RNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI 148
Query: 544 LLDSEMNIKIADFGFS 559
L+++E +KI DFG +
Sbjct: 149 LVENENRVKIGDFGLT 164
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 116/225 (51%), Gaps = 22/225 (9%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G ++L++ +G G + +V +HV TG+ AIK++D T +++ +E+ ++K H
Sbjct: 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHH 80
Query: 106 -NIVKLFQVI------ETEKTLYLVMEYASGGEVFDYL--VLHGRMKEKEARAKFRQIVS 156
NI + + L+LVME+ G V D + +KE+ R+I+
Sbjct: 81 RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILR 140
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF--TPGNKLDTFCGSPPYAAPE 214
+ + HQ K+IHRD+K +N+LL +K+ DFG S + T G + +TF G+P + APE
Sbjct: 141 GLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR-NTFIGTPYWMAPE 199
Query: 215 LFQGKK-----YDGPEVDVWSLGVILYTLVSGSLPF-DGSTLREL 253
+ + YD + D+WSLG+ + G+ P D +R L
Sbjct: 200 VIACDENPDATYDF-KSDLWSLGITAIEMAEGAPPLCDMHPMRAL 243
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 487 LYLVMEYASGGEVFDYL--VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
L+LVME+ G V D + +KE+ R+I+ + + HQ K+IHRD+K +N+L
Sbjct: 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL 161
Query: 545 LDSEMNIKIADFGFSNEF--TPGNKLDTFCGSPPYAAPELF 583
L +K+ DFG S + T G + +TF G+P + APE+
Sbjct: 162 LTENAEVKLVDFGVSAQLDRTVGRR-NTFIGTPYWMAPEVI 201
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 7/206 (3%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-- 102
+ + + + IG+G F +V + TGK A+K +DK ++ + L RIM L
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
Query: 103 --DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
D P IV + T L +++ +GG++ +L HG E + R +I+ +++
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 306
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ-GK 219
H + +++RDLK N+LLD +++I+D G + +F+ K G+ Y APE+ Q G
Sbjct: 307 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHASVGTHGYMAPEVLQKGV 365
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF 245
YD D +SLG +L+ L+ G PF
Sbjct: 366 AYDS-SADWFSLGCMLFKLLRGHSPF 390
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Query: 483 TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
T L +++ +GG++ +L HG E + R +I+ +++ H + +++RDLK N
Sbjct: 262 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPAN 321
Query: 543 LLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHN 602
+LLD +++I+D G + +F+ K G+ Y APE+ Q G SS +
Sbjct: 322 ILLDEHGHVRISDLGLACDFSK-KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML 380
Query: 603 SSISPAPTNFKRQNTIDSASIKENTARLNAGRP 635
+ + F++ T D I T + P
Sbjct: 381 FKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP 413
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G+ + + IG G+F V K +VA+K+++ T P LQ EV +++ H
Sbjct: 8 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NI+ LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K
Sbjct: 65 NIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNE---FTPGNKLDTFCGSPPYAAPEL--FQGK 219
IIHRDLK+ N+ L ++ +KI DFG + E ++ ++ + GS + APE+ Q K
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF 245
+ DV++ G++LY L++G LP+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPY 209
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K IIH
Sbjct: 68 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNE---FTPGNKLDTFCGSPPYAAPELFQ 584
RDLK+ N+ L ++ +KI DFG + E ++ ++ + GS + APE+ +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 7/206 (3%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-- 102
+ + + + IG+G F +V + TGK A+K +DK ++ + L RIM L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 103 --DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
D P IV + T L +++ +GG++ +L HG E + R +I+ +++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ-GK 219
H + +++RDLK N+LLD +++I+D G + +F+ K G+ Y APE+ Q G
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHASVGTHGYMAPEVLQKGV 366
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF 245
YD D +SLG +L+ L+ G PF
Sbjct: 367 AYDS-SADWFSLGCMLFKLLRGHSPF 391
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Query: 483 TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
T L +++ +GG++ +L HG E + R +I+ +++ H + +++RDLK N
Sbjct: 263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPAN 322
Query: 543 LLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHN 602
+LLD +++I+D G + +F+ K G+ Y APE+ Q G SS +
Sbjct: 323 ILLDEHGHVRISDLGLACDFSK-KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML 381
Query: 603 SSISPAPTNFKRQNTIDSASIKENTARLNAGRP 635
+ + F++ T D I T + P
Sbjct: 382 FKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP 414
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 8/247 (3%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKL-FREVRIMKMLDHPN 106
++ + +GKG F +V + TGK A K ++K ++ + + E +I++ ++
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 164
+V L ET+ L LV+ +GG++ ++ G+ EARA F +I ++ H++
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
+I++RDLK EN+LLD +I+I+D G + G + G+ Y APE+ + ++Y
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTF- 364
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP----FYMSTDCENLLKKFL 280
D W+LG +LY +++G PF + RE V R +P S +L + L
Sbjct: 365 SPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLL 424
Query: 281 VLNPAKR 287
+PA+R
Sbjct: 425 CKDPAER 431
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
++ L ET+ L LV+ +GG++ ++ G+ EARA F +I ++ H++
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
+I++RDLK EN+LLD +I+I+D G + G + G+ Y APE+
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV 356
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 121/255 (47%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 25 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +K+L Y+VME A+ +V + H RM Q++
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 139
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + F + Y APE+
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVI 199
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ ++ G + F G+ + +V+ + T C +
Sbjct: 200 LGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ-------LGTPCPEFM 251
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 252 KK---LQPTVRTYVE 263
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 474 LLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 528
LL +F + +E + +Y+VME A+ +V + H RM Q++ +++
Sbjct: 90 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHL 144
Query: 529 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + F + Y APE+ G
Sbjct: 145 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILG 201
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 7/206 (3%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-- 102
+ + + + IG+G F +V + TGK A+K +DK ++ + L RIM L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 103 --DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
D P IV + T L +++ +GG++ +L HG E + R +I+ +++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ-GK 219
H + +++RDLK N+LLD +++I+D G + +F+ K G+ Y APE+ Q G
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS-KKKPHASVGTHGYMAPEVLQKGV 366
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF 245
YD D +SLG +L+ L+ G PF
Sbjct: 367 AYDS-SADWFSLGCMLFKLLRGHSPF 391
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Query: 483 TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
T L +++ +GG++ +L HG E + R +I+ +++ H + +++RDLK N
Sbjct: 263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPAN 322
Query: 543 LLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHN 602
+LLD +++I+D G + +F+ K G+ Y APE+ Q G SS +
Sbjct: 323 ILLDEHGHVRISDLGLACDFS-KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML 381
Query: 603 SSISPAPTNFKRQNTIDSASIKENTARLNAGRP 635
+ + F++ T D I T + P
Sbjct: 382 FKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP 414
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 7/206 (3%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-- 102
+ + + + IG+G F +V + TGK A+K +DK ++ + L RIM L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 103 --DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
D P IV + T L +++ +GG++ +L HG E + R +I+ +++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ-GK 219
H + +++RDLK N+LLD +++I+D G + +F+ K G+ Y APE+ Q G
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS-KKKPHASVGTHGYMAPEVLQKGV 366
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF 245
YD D +SLG +L+ L+ G PF
Sbjct: 367 AYDS-SADWFSLGCMLFKLLRGHSPF 391
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Query: 483 TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
T L +++ +GG++ +L HG E + R +I+ +++ H + +++RDLK N
Sbjct: 263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPAN 322
Query: 543 LLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHN 602
+LLD +++I+D G + +F+ K G+ Y APE+ Q G SS +
Sbjct: 323 ILLDEHGHVRISDLGLACDFS-KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML 381
Query: 603 SSISPAPTNFKRQNTIDSASIKENTARLNAGRP 635
+ + F++ T D I T + P
Sbjct: 382 FKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP 414
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 9/220 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFR-EVRIMKMLDHP 105
KY + + +G+G F V + K K + G+ Q L + E+ I+ + H
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV----KGTDQVLVKKEISILNIARHR 61
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQK 164
NI+ L + E+ + L ++ E+ SG ++F+ + + E+E + Q+ A+Q+ H
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 165 KIIHRDLKAENLLLDSEMN--IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
I H D++ EN++ + + IKI +FG + + PG+ +P Y APE+ Q
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVS 181
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY 262
D+WSLG ++Y L+SG PF T +++ E ++ +Y
Sbjct: 182 TA-TDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEY 220
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKK 532
+L L + E+ + L ++ E+ SG ++F+ + + E+E + Q+ A+Q+ H
Sbjct: 63 ILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 533 IIHRDLKAENLLLDSEMN--IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVT 590
I H D++ EN++ + + IKI +FG + + PG+ +P Y APE+ Q T
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVST 182
Query: 591 SS 592
++
Sbjct: 183 AT 184
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 130/259 (50%), Gaps = 32/259 (12%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+L +G+G F +V + T + VAIK + ++P + +E ++MK L H +V
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLV 325
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQYCHQK 164
+L+ V+ +E+ +Y+V EY S G + D+L + R+ + A QI S + Y +
Sbjct: 326 QLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA--QIASGMAYVERM 382
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQ 217
+HRDL+A N+L+ + K+ADFG + NE+T G K +P A F
Sbjct: 383 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 218 GKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDC---- 272
K DVWS G++L L + G +P+ G RE+ ++V RG YR+P +C
Sbjct: 443 IKS------DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP--CPPECPESL 493
Query: 273 ENLLKKFLVLNPAKRASLE 291
+L+ + P +R + E
Sbjct: 494 HDLMCQCWRKEPEERPTFE 512
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQY 527
E L++L+ V+ +E+ +Y+V EY S G + D+L + R+ + A QI S + Y
Sbjct: 322 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA--QIASGMAY 378
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL+A N+L+ + K+ADFG + NE+T
Sbjct: 379 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G+ + + IG G+F V K +VA+K+++ T P LQ EV +++ H
Sbjct: 35 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 91
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NI+ LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K
Sbjct: 92 NIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 150
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPEL--FQGK 219
IIHRDLK+ N+ L ++ +KI DFG + + ++ ++ + GS + APE+ Q K
Sbjct: 151 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 210
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF 245
+ DV++ G++LY L++G LP+
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQLPY 236
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K IIH
Sbjct: 95 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 154
Query: 536 RDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPELFQ 584
RDLK+ N+ L ++ +KI DFG + + ++ ++ + GS + APE+ +
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G+ + + IG G+F V K +VA+K+++ T P LQ EV +++ H
Sbjct: 36 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 92
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NI+ LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K
Sbjct: 93 NIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 151
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPEL--FQGK 219
IIHRDLK+ N+ L ++ +KI DFG + + ++ ++ + GS + APE+ Q K
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF 245
+ DV++ G++LY L++G LP+
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPY 237
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K IIH
Sbjct: 96 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 536 RDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPELFQ 584
RDLK+ N+ L ++ +KI DFG + + ++ ++ + GS + APE+ +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
IG G+F V A+ G +VA+KI+ + + + + REV IMK L HPNIV
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQ---IVSAVQYCHQKK--IIH 168
+ L +V EY S G ++ L G ++ + R + + + Y H + I+H
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVH 162
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF------CGSPPYAAPELFQGKKYD 222
R+LK+ NLL+D + +K+ DFG S K TF G+P + APE+ + + +
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRL-----KASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPF 245
+ DV+S GVIL+ L + P+
Sbjct: 218 E-KSDVYSFGVILWELATLQQPW 239
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQ---IVSAVQYCHQKK--IIHRDLKAE 541
L +V EY S G ++ L G ++ + R + + + Y H + I+HR+LK+
Sbjct: 109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSP 168
Query: 542 NLLLDSEMNIKIADFGFSNEFTPGNKLDTF------CGSPPYAAPELFQ 584
NLL+D + +K+ DFG S K TF G+P + APE+ +
Sbjct: 169 NLLVDKKYTVKVCDFGLSRL-----KASTFLSSKSAAGTPEWMAPEVLR 212
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ + +G GN V H P+G +A K+I ++ P ++ RE++++ + P I
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KI 166
V + ++ + + ME+ GG + L GR+ E+ ++ + Y +K KI
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 145
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
+HRD+K N+L++S IK+ DFG S + + ++F G+ Y +PE QG Y +
Sbjct: 146 MHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYS-VQS 203
Query: 227 DVWSLGVILYTLVSGSLPFDGST----LRELRERVL-RGKYRIPF-YMSTDCENLLKKFL 280
D+WS+G+ L + G P + + EL + ++ ++P S + ++ + K L
Sbjct: 204 DIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCL 263
Query: 281 VLNPAKRASLE 291
+ NPA+RA L+
Sbjct: 264 IKNPAERADLK 274
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 489 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAENLLLDS 547
+ ME+ GG + L GR+ E+ ++ + Y +K KI+HRD+K N+L++S
Sbjct: 100 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 159
Query: 548 EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IK+ DFG S + + ++F G+ Y +PE QG
Sbjct: 160 RGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQG 196
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREV 96
+E H+ K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+
Sbjct: 15 EERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREI 69
Query: 97 RIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQ 153
I+K L H NIVK V + + L L+MEY G + DYL H R+ + Q
Sbjct: 70 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 129
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP---- 209
I ++Y K+ IHRDL N+L+++E +KI DFG + + P +K P
Sbjct: 130 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPI 188
Query: 210 -YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
+ APE K+ DVWS GV+LY L +
Sbjct: 189 FWYAPESLTESKFSVAS-DVWSFGVVLYELFT 219
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L L+MEY G + DYL H R+ + QI ++Y K+ IHRDL N+
Sbjct: 93 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI 152
Query: 544 LLDSEMNIKIADFGFS 559
L+++E +KI DFG +
Sbjct: 153 LVENENRVKIGDFGLT 168
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +KTL YLVME A+ +V + H RM Q++
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 175
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 235
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 236 LGMGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 287
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 288 KK---LQPTVRNYVE 299
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 473 TLLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
+LL +F + +E + +YLVME A+ +V + H RM Q++ +++
Sbjct: 125 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKH 179
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 237
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 8/247 (3%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKL-FREVRIMKMLDHPN 106
++ + +GKG F +V + TGK A K ++K ++ + + E +I++ ++
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 164
+V L ET+ L LV+ +GG++ ++ G+ EARA F +I ++ H++
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
+I++RDLK EN+LLD +I+I+D G + G + G+ Y APE+ + ++Y
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTF- 364
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP----FYMSTDCENLLKKFL 280
D W+LG +LY +++G PF + RE V R +P S +L + L
Sbjct: 365 SPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLL 424
Query: 281 VLNPAKR 287
+PA+R
Sbjct: 425 CKDPAER 431
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 482 ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQKKIIHRDLK 539
ET+ L LV+ +GG++ ++ G+ EARA F +I ++ H+++I++RDLK
Sbjct: 254 ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLK 313
Query: 540 AENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
EN+LLD +I+I+D G + G + G+ Y APE+
Sbjct: 314 PENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV 356
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREV 96
+E H+ K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+
Sbjct: 11 EERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREI 65
Query: 97 RIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQ 153
I+K L H NIVK V + + L L+MEY G + DYL H R+ + Q
Sbjct: 66 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 125
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP---- 209
I ++Y K+ IHRDL N+L+++E +KI DFG + + P +K P
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPI 184
Query: 210 -YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
+ APE K+ DVWS GV+LY L +
Sbjct: 185 FWYAPESLTESKFSVAS-DVWSFGVVLYELFT 215
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L L+MEY G + DYL H R+ + QI ++Y K+ IHRDL N+
Sbjct: 89 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI 148
Query: 544 LLDSEMNIKIADFGFS 559
L+++E +KI DFG +
Sbjct: 149 LVENENRVKIGDFGLT 164
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREV 96
+E H+ K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+
Sbjct: 13 EERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREI 67
Query: 97 RIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQ 153
I+K L H NIVK V + + L L+MEY G + DYL H R+ + Q
Sbjct: 68 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 127
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP---- 209
I ++Y K+ IHRDL N+L+++E +KI DFG + + P +K P
Sbjct: 128 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPI 186
Query: 210 -YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
+ APE K+ DVWS GV+LY L +
Sbjct: 187 FWYAPESLTESKFSVAS-DVWSFGVVLYELFT 217
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L L+MEY G + DYL H R+ + QI ++Y K+ IHRDL N+
Sbjct: 91 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI 150
Query: 544 LLDSEMNIKIADFGFS 559
L+++E +KI DFG +
Sbjct: 151 LVENENRVKIGDFGLT 166
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 25/215 (11%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREV 96
+E H+ K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+
Sbjct: 26 EERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREI 80
Query: 97 RIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--- 151
I+K L H NIVK V + + L L+MEY G + DYL H KE+ K
Sbjct: 81 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQY 137
Query: 152 -RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP- 209
QI ++Y K+ IHRDL N+L+++E +KI DFG + + P +K P
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEXXKVKEPGE 196
Query: 210 ----YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
+ APE K+ DVWS GV+LY L +
Sbjct: 197 SPIFWYAPESLTESKFSVAS-DVWSFGVVLYELFT 230
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQYCHQKKIIHRDLKA 540
+ L L+MEY G + DYL H KE+ K QI ++Y K+ IHRDL
Sbjct: 104 RNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLAT 160
Query: 541 ENLLLDSEMNIKIADFGFS 559
N+L+++E +KI DFG +
Sbjct: 161 RNILVENENRVKIGDFGLT 179
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREV 96
+E H+ K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+
Sbjct: 39 EERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREI 93
Query: 97 RIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQ 153
I+K L H NIVK V + + L L+MEY G + DYL H R+ + Q
Sbjct: 94 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 153
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP---- 209
I ++Y K+ IHRDL N+L+++E +KI DFG + + P +K P
Sbjct: 154 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPI 212
Query: 210 -YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
+ APE K+ DVWS GV+LY L +
Sbjct: 213 FWYAPESLTESKFSVAS-DVWSFGVVLYELFT 243
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L L+MEY G + DYL H R+ + QI ++Y K+ IHRDL N+
Sbjct: 117 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI 176
Query: 544 LLDSEMNIKIADFGFS 559
L+++E +KI DFG +
Sbjct: 177 LVENENRVKIGDFGLT 192
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G+ + + IG G+F V K +VA+K+++ T P LQ EV +++ H
Sbjct: 13 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 69
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NI+ LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K
Sbjct: 70 NIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 128
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPEL--FQGK 219
IIHRDLK+ N+ L ++ +KI DFG + + ++ ++ + GS + APE+ Q K
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF 245
+ DV++ G++LY L++G LP+
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPY 214
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K IIH
Sbjct: 73 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 132
Query: 536 RDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPELFQ 584
RDLK+ N+ L ++ +KI DFG + + ++ ++ + GS + APE+ +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREV 96
+E H+ K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+
Sbjct: 14 EERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREI 68
Query: 97 RIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQ 153
I+K L H NIVK V + + L L+MEY G + DYL H R+ + Q
Sbjct: 69 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 128
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP---- 209
I ++Y K+ IHRDL N+L+++E +KI DFG + + P +K P
Sbjct: 129 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPI 187
Query: 210 -YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
+ APE K+ DVWS GV+LY L +
Sbjct: 188 FWYAPESLTESKFSVAS-DVWSFGVVLYELFT 218
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L L+MEY G + DYL H R+ + QI ++Y K+ IHRDL N+
Sbjct: 92 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI 151
Query: 544 LLDSEMNIKIADFGFS 559
L+++E +KI DFG +
Sbjct: 152 LVENENRVKIGDFGLT 167
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREV 96
+E H+ K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+
Sbjct: 26 EERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREI 80
Query: 97 RIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQ 153
I+K L H NIVK V + + L L+MEY G + DYL H R+ + Q
Sbjct: 81 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 140
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP---- 209
I ++Y K+ IHRDL N+L+++E +KI DFG + + P +K P
Sbjct: 141 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPI 199
Query: 210 -YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
+ APE K+ DVWS GV+LY L +
Sbjct: 200 FWYAPESLTESKFSVAS-DVWSFGVVLYELFT 230
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L L+MEY G + DYL H R+ + QI ++Y K+ IHRDL N+
Sbjct: 104 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI 163
Query: 544 LLDSEMNIKIADFGFS 559
L+++E +KI DFG +
Sbjct: 164 LVENENRVKIGDFGLT 179
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G+ + + IG G+F V K +VA+K+++ T P LQ EV +++ H
Sbjct: 13 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 69
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NI+ LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K
Sbjct: 70 NIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 128
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPEL--FQGK 219
IIHRDLK+ N+ L ++ +KI DFG + + ++ ++ + GS + APE+ Q K
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF 245
+ DV++ G++LY L++G LP+
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPY 214
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K IIH
Sbjct: 73 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 132
Query: 536 RDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPELFQ 584
RDLK+ N+ L ++ +KI DFG + + ++ ++ + GS + APE+ +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +KTL YLVME A+ +V + H RM Q++
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 138
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 199 LGMGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 250
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 251 KK---LQPTVRNYVE 262
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 473 TLLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
+LL +F + +E + +YLVME A+ +V + H RM Q++ +++
Sbjct: 88 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKH 142
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +KTL YLVME A+ +V + H RM Q++
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 198 LGMGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 249
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 250 KK---LQPTVRNYVE 261
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 473 TLLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
+LL +F + +E + +YLVME A+ +V + H RM Q++ +++
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKH 141
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 115/216 (53%), Gaps = 15/216 (6%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLD 103
+ +++ K IG+G F++V A + G VA+K + L + + +E+ ++K L+
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN 90
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-----MKEKEARAKFRQIVSAV 158
HPN++K + + L +V+E A G++ ++ H + + E+ F Q+ SA+
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFG----FSNEFTPGNKLDTFCGSPPYAAPE 214
++ H ++++HRD+K N+ + + +K+ D G FS++ T + L G+P Y +PE
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL---VGTPYYMSPE 206
Query: 215 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTL 250
Y+ + D+WSLG +LY + + PF G +
Sbjct: 207 RIHENGYNF-KSDIWSLGCLLYEMAALQSPFYGDKM 241
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-----MKEKEARAKFRQIVSAVQYC 528
++K + + L +V+E A G++ ++ H + + E+ F Q+ SA+++
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 529 HQKKIIHRDLKAENLLLDSEMNIKIADFG----FSNEFTPGNKLDTFCGSPPYAAPE 581
H ++++HRD+K N+ + + +K+ D G FS++ T + L G+P Y +PE
Sbjct: 153 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL---VGTPYYMSPE 206
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G+ + + IG G+F V K +VA+K+++ T P LQ EV +++ H
Sbjct: 10 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 66
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NI+ LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K
Sbjct: 67 NIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 125
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPEL--FQGK 219
IIHRDLK+ N+ L ++ +KI DFG + + ++ ++ + GS + APE+ Q K
Sbjct: 126 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 185
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF 245
+ DV++ G++LY L++G LP+
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQLPY 211
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K IIH
Sbjct: 70 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 129
Query: 536 RDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPELFQ 584
RDLK+ N+ L ++ +KI DFG + + ++ ++ + GS + APE+ +
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREV 96
+E H+ K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+
Sbjct: 8 EERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREI 62
Query: 97 RIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQ 153
I+K L H NIVK V + + L L+MEY G + DYL H R+ + Q
Sbjct: 63 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 122
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP---- 209
I ++Y K+ IHRDL N+L+++E +KI DFG + + P +K P
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPI 181
Query: 210 -YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
+ APE K+ DVWS GV+LY L +
Sbjct: 182 FWYAPESLTESKFSVAS-DVWSFGVVLYELFT 212
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L L+MEY G + DYL H R+ + QI ++Y K+ IHRDL N+
Sbjct: 86 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI 145
Query: 544 LLDSEMNIKIADFGFS 559
L+++E +KI DFG +
Sbjct: 146 LVENENRVKIGDFGLT 161
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +KTL YLVME A+ +V + H RM Q++
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 138
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 199 LGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 250
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 251 KK---LQPTVRNYVE 262
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 473 TLLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
+LL +F + +E + +YLVME A+ +V + H RM Q++ +++
Sbjct: 88 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKH 142
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 110/213 (51%), Gaps = 21/213 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREV 96
+E H+ K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+
Sbjct: 8 EERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREI 62
Query: 97 RIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQ 153
I+K L H NIVK V + + L L+MEY G + DYL H R+ + Q
Sbjct: 63 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 122
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP---- 209
I ++Y K+ IHRDL N+L+++E +KI DFG + + P +K + F P
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDK-EFFKVKEPGESP 180
Query: 210 --YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
+ APE K+ DVWS GV+LY L +
Sbjct: 181 IFWYAPESLTESKFSVAS-DVWSFGVVLYELFT 212
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L L+MEY G + DYL H R+ + QI ++Y K+ IHRDL N+
Sbjct: 86 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI 145
Query: 544 LLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSS 592
L+++E +KI DFG + + P +K + F P +P + +T S
Sbjct: 146 LVENENRVKIGDFGLT-KVLPQDK-EFFKVKEPGESPIFWYAPESLTES 192
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
IG G+F V A+ G +VA+KI+ + + + + REV IMK L HPNIV
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQ---IVSAVQYCHQKK--IIH 168
+ L +V EY S G ++ L G ++ + R + + + Y H + I+H
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVH 162
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF------CGSPPYAAPELFQGKKYD 222
RDLK+ NLL+D + +K+ DFG S K F G+P + APE+ + + +
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRL-----KASXFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPF 245
+ DV+S GVIL+ L + P+
Sbjct: 218 E-KSDVYSFGVILWELATLQQPW 239
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQ---IVSAVQYCHQKK--IIHRDLKAE 541
L +V EY S G ++ L G ++ + R + + + Y H + I+HRDLK+
Sbjct: 109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSP 168
Query: 542 NLLLDSEMNIKIADFGFSNEFTPGNKLDTF------CGSPPYAAPELFQ 584
NLL+D + +K+ DFG S K F G+P + APE+ +
Sbjct: 169 NLLVDKKYTVKVCDFGLSRL-----KASXFLXSKXAAGTPEWMAPEVLR 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREV 96
+E H+ K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+
Sbjct: 8 EERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREI 62
Query: 97 RIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQ 153
I+K L H NIVK V + + L L+MEY G + DYL H R+ + Q
Sbjct: 63 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 122
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP---- 209
I ++Y K+ IHRDL N+L+++E +KI DFG + + P +K P
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPI 181
Query: 210 -YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
+ APE K+ DVWS GV+LY L +
Sbjct: 182 FWYAPESLTESKFSVAS-DVWSFGVVLYELFT 212
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L L+MEY G + DYL H R+ + QI ++Y K+ IHRDL N+
Sbjct: 86 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI 145
Query: 544 LLDSEMNIKIADFGFS 559
L+++E +KI DFG +
Sbjct: 146 LVENENRVKIGDFGLT 161
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +KTL YLVME A+ +V + H RM Q++
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 198 LGMGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 249
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 250 KK---LQPTVRNYVE 261
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 473 TLLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
+LL +F + +E + +YLVME A+ +V + H RM Q++ +++
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKH 141
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +KTL YLVME A+ +V + H RM Q++
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 136
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 137 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 196
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 197 LGMGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 248
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 249 KK---LQPTVRNYVE 260
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 473 TLLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
+LL +F + +E + +YLVME A+ +V + H RM Q++ +++
Sbjct: 86 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKH 140
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 141 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 198
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +KTL YLVME A+ +V + H RM Q++
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 131
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 192 LGMGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 243
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 244 KK---LQPTVRNYVE 255
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 473 TLLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
+LL +F + +E + +YLVME A+ +V + H RM Q++ +++
Sbjct: 81 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKH 135
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Query: 49 KLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+ I+K L H
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQH 74
Query: 105 PNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYC 161
NIVK V + + L L+MEY G + DYL H R+ + QI ++Y
Sbjct: 75 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 134
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----YAAPELF 216
K+ IHRDL N+L+++E +KI DFG + + P +K P + APE
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS 240
K+ DVWS GV+LY L +
Sbjct: 194 TESKFSVAS-DVWSFGVVLYELFT 216
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L L+MEY G + DYL H R+ + QI ++Y K+ IHRDL N+
Sbjct: 90 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI 149
Query: 544 LLDSEMNIKIADFGFS 559
L+++E +KI DFG +
Sbjct: 150 LVENENRVKIGDFGLT 165
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 11/222 (4%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G+ + + IG G+F V K +VA+K+++ T P LQ EV +++ H
Sbjct: 24 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NI+ LF T+ L +V ++ G ++ +L + + K+ RQ + Y H K
Sbjct: 81 NIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNE---FTPGNKLDTFCGSPPYAAPELFQGKKY 221
IIHRDLK+ N+ L + +KI DFG + E ++ ++ + GS + APE+ + +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 222 D--GPEVDVWSLGVILYTLVSGSLPFDGSTLR-ELRERVLRG 260
+ + DV++ G++LY L++G LP+ R ++ E V RG
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 241
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
LF T+ L +V ++ G ++ +L + + K+ RQ + Y H K IIH
Sbjct: 84 LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 143
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNE---FTPGNKLDTFCGSPPYAAPELFQ 584
RDLK+ N+ L + +KI DFG + E ++ ++ + GS + APE+ +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREV 96
+E H+ K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+
Sbjct: 7 EERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREI 61
Query: 97 RIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQ 153
I+K L H NIVK V + + L L+MEY G + DYL H R+ + Q
Sbjct: 62 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 121
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP---- 209
I ++Y K+ IHRDL N+L+++E +KI DFG + + P +K P
Sbjct: 122 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPI 180
Query: 210 -YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
+ APE K+ DVWS GV+LY L +
Sbjct: 181 FWYAPESLTESKFSVAS-DVWSFGVVLYELFT 211
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L L+MEY G + DYL H R+ + QI ++Y K+ IHRDL N+
Sbjct: 85 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI 144
Query: 544 LLDSEMNIKIADFGFS 559
L+++E +KI DFG +
Sbjct: 145 LVENENRVKIGDFGLT 160
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +KTL YLVME A+ +V + H RM Q++
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 131
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 192 LGMGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 243
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 244 KK---LQPTVRNYVE 255
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 473 TLLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
+LL +F + +E + +YLVME A+ +V + H RM Q++ +++
Sbjct: 81 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKH 135
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +KTL YLVME A+ +V + H RM Q++
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 130
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 190
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 191 LGMGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 242
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 243 KK---LQPTVRNYVE 254
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 473 TLLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
+LL +F + +E + +YLVME A+ +V + H RM Q++ +++
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKH 134
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Query: 49 KLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+ I+K L H
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQH 68
Query: 105 PNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYC 161
NIVK V + + L L+MEY G + DYL H R+ + QI ++Y
Sbjct: 69 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 128
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----YAAPELF 216
K+ IHRDL N+L+++E +KI DFG + + P +K P + APE
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS 240
K+ DVWS GV+LY L +
Sbjct: 188 TESKFSVAS-DVWSFGVVLYELFT 210
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L L+MEY G + DYL H R+ + QI ++Y K+ IHRDL N+
Sbjct: 84 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI 143
Query: 544 LLDSEMNIKIADFGFS 559
L+++E +KI DFG +
Sbjct: 144 LVENENRVKIGDFGLT 159
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 129/257 (50%), Gaps = 28/257 (10%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+L +G+G F +V + T + VAIK + ++P + +E ++MK L H +V
Sbjct: 188 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMSP---EAFLQEAQVMKKLRHEKLV 243
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYL--VLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
+L+ V+ +E+ +Y+V EY S G + D+L + ++ + QI S + Y +
Sbjct: 244 QLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 302
Query: 167 IHRDLKAENLLLDSEMNIKIADFGF-----SNEFTP--GNKLDTFCGSPPYAAPELFQGK 219
+HRDL+A N+L+ + K+ADFG NE+T G K +P A F K
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDC----EN 274
DVWS G++L L + G +P+ G RE+ ++V RG YR+P +C +
Sbjct: 363 S------DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP--CPPECPESLHD 413
Query: 275 LLKKFLVLNPAKRASLE 291
L+ + +P +R + E
Sbjct: 414 LMCQCWRKDPEERPTFE 430
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYL--VLHGRMKEKEARAKFRQIVSAVQYCH 529
E L++L+ V+ +E+ +Y+V EY S G + D+L + ++ + QI S + Y
Sbjct: 240 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 298
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGF-----SNEFT 563
+ +HRDL+A N+L+ + K+ADFG NE+T
Sbjct: 299 RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYT 337
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 121/255 (47%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +K+L Y+VME A+ +V + H RM Q++
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 138
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ ++ G + F G+ + +V+ + T C +
Sbjct: 199 LGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ-------LGTPCPEFM 250
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 251 KK---LQPTVRTYVE 262
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 474 LLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 528
LL +F + +E + +Y+VME A+ +V + H RM Q++ +++
Sbjct: 89 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHL 143
Query: 529 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +KTL YLVME A+ +V + H RM Q++
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS-----YLLYQMLC 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 198 LGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 249
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 250 KK---LQPTVRNYVE 261
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 473 TLLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
+LL +F + +E + +YLVME A+ +V + H RM Q++ +++
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS-----YLLYQMLCGIKH 141
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 129/254 (50%), Gaps = 32/254 (12%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+VMEY S G + D+L G M + + QI S + Y + +HR
Sbjct: 82 V-SEEPIYIVMEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE+T G K +P A F K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-- 196
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDC----ENLLK 277
DVWS G++L L + G +P+ G RE+ ++V RG YR+P +C +L+
Sbjct: 197 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP--CPPECPESLHDLMC 249
Query: 278 KFLVLNPAKRASLE 291
+ +P +R + E
Sbjct: 250 QCWRKDPEERPTFE 263
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQY 527
E L++L+ V+ +E+ +Y+VMEY S G + D+L G M + + QI S + Y
Sbjct: 73 EKLVQLYAVV-SEEPIYIVMEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL+A N+L+ + K+ADFG + NE+T
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G+ + + IG G+F V K +VA+K+++ T P LQ EV +++ H
Sbjct: 8 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NI+ LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K
Sbjct: 65 NIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPEL--FQGK 219
IIHRDLK+ N+ L ++ +KI DFG + + ++ ++ + GS + APE+ Q K
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF 245
+ DV++ G++LY L++G LP+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPY 209
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
LF T+ L +V ++ G ++ +L ++ + + + RQ + Y H K IIH
Sbjct: 68 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 536 RDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPELFQ 584
RDLK+ N+ L ++ +KI DFG + + ++ ++ + GS + APE+ +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 121/255 (47%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +K+L Y+VME A+ +V + H RM Q++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ ++ G + F G+ + +V+ + T C +
Sbjct: 198 LGMGY-KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ-------LGTPCPEFM 249
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 250 KK---LQPTVRTYVE 261
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 474 LLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 528
LL +F + +E + +Y+VME A+ +V + H RM Q++ +++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHL 142
Query: 529 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +KTL YLVME A+ +V + H RM Q++
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS-----YLLYQMLX 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 198 LGMGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 249
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 250 KK---LQPTVRNYVE 261
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 473 TLLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
+LL +F + +E + +YLVME A+ +V + H RM Q++ +++
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS-----YLLYQMLXGIKH 141
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +KTL YLVME A+ +V + H RM Q++
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 198 LGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 249
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 250 KK---LQPTVRNYVE 261
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 473 TLLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
+LL +F + +E + +YLVME A+ +V + H RM Q++ +++
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKH 141
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 114/222 (51%), Gaps = 11/222 (4%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G+ + + IG G+F V K +VA+K+++ T P LQ EV +++ H
Sbjct: 24 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NI+ LF T L +V ++ G ++ +L + + K+ RQ + Y H K
Sbjct: 81 NIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNE---FTPGNKLDTFCGSPPYAAPELFQGKKY 221
IIHRDLK+ N+ L + +KI DFG + E ++ ++ + GS + APE+ + +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 222 D--GPEVDVWSLGVILYTLVSGSLPFDGSTLR-ELRERVLRG 260
+ + DV++ G++LY L++G LP+ R ++ E V RG
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 241
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
LF T L +V ++ G ++ +L + + K+ RQ + Y H K IIH
Sbjct: 84 LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 143
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNE---FTPGNKLDTFCGSPPYAAPELFQ 584
RDLK+ N+ L + +KI DFG + E ++ ++ + GS + APE+ +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +KTL YLVME A+ +V + H RM Q++
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS-----YLLYQMLX 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 198 LGMGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 249
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 250 KK---LQPTVRNYVE 261
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 473 TLLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
+LL +F + +E + +YLVME A+ +V + H RM Q++ +++
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS-----YLLYQMLXGIKH 141
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +KTL YLVME A+ +V + H RM Q++
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS-----YLLYQMLX 130
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 190
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 191 LGMGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 242
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 243 KK---LQPTVRNYVE 254
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 473 TLLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
+LL +F + +E + +YLVME A+ +V + H RM Q++ +++
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS-----YLLYQMLXGIKH 134
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 18/258 (6%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ + +G GN V H P+G +A K+I ++ P ++ RE++++ + P I
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KI 166
V + ++ + + ME+ GG + L GR+ E+ ++ + Y +K KI
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
+HRD+K N+L++S IK+ DFG S + + ++F G+ Y +PE QG Y +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHY-SVQS 184
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYM-------------STDCE 273
D+WS+G+ L + G P +E R + + Y+ S + +
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKE-DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQ 243
Query: 274 NLLKKFLVLNPAKRASLE 291
+ + K L+ NPA+RA L+
Sbjct: 244 DFVNKCLIKNPAERADLK 261
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-K 532
++ + ++ + + ME+ GG + L GR+ E+ ++ + Y +K K
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
I+HRD+K N+L++S IK+ DFG S + + ++F G+ Y +PE QG
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQG 177
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 210 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 266
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 326
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHR+L A N L+ +K+ADFG S T G+ G+ +
Sbjct: 327 ISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 385
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 386 TAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 443
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 444 CPEKVYELMRACWQWNPSDRPSF 466
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 337
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPE 581
IHR+L A N L+ +K+ADFG S T G+ G+ + APE
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 389
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 111/220 (50%), Gaps = 20/220 (9%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRIM 99
E + L + IG G F KV A + G EVA+K D + +++ + +E ++
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 100 KMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR-QIVSAV 158
ML HPNI+ L V E L LVME+A GG + VL G+ + + QI +
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPL--NRVLSGKRIPPDILVNWAVQIARGM 118
Query: 159 QYCHQKK---IIHRDLKAENLLLDSEMN--------IKIADFGFSNEFTPGNKLDTFCGS 207
Y H + IIHRDLK+ N+L+ ++ +KI DFG + E+ K+ G+
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGA 177
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
+ APE+ + + DVWS GV+L+ L++G +PF G
Sbjct: 178 YAWMAPEVIRASMFSKGS-DVWSYGVLLWELLTGEVPFRG 216
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 20/137 (14%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR-QIVSAVQYCHQKK 532
++ L V E L LVME+A GG + VL G+ + + QI + Y H +
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPL--NRVLSGKRIPPDILVNWAVQIARGMNYLHDEA 125
Query: 533 I---IHRDLKAENLLLDSEMN--------IKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
I IHRDLK+ N+L+ ++ +KI DFG + E+ K+ G+ + APE
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGAYAWMAPE 184
Query: 582 -----LFQGGAPVTSSG 593
+F G+ V S G
Sbjct: 185 VIRASMFSKGSDVWSYG 201
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 108/206 (52%), Gaps = 10/206 (4%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G+ + + IG G+F V K +VA+K+++ T P LQ EV +++ H
Sbjct: 8 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NI+ LF T L +V ++ G ++ +L ++ + + + RQ + Y H K
Sbjct: 65 NIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPEL--FQGK 219
IIHRDLK+ N+ L ++ +KI DFG + + ++ ++ + GS + APE+ Q K
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPF 245
+ DV++ G++LY L++G LP+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPY 209
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
LF T L +V ++ G ++ +L ++ + + + RQ + Y H K IIH
Sbjct: 68 LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 536 RDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPELFQ 584
RDLK+ N+ L ++ +KI DFG + + ++ ++ + GS + APE+ +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 7/211 (3%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
I +Y+ + +G+G + +V A T + VAIK I G REV ++K L H
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NI++L VI L+L+ EYA ++ Y+ + + + ++ Q+++ V +CH +
Sbjct: 93 RNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR 151
Query: 165 KIIHRDLKAENLLLD----SEMNI-KIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 218
+ +HRDLK +NLLL SE + KI DFG + F P + + Y PE+ G
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLG 211
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
++ VD+WS+ I ++ + F G +
Sbjct: 212 SRHYSTSVDIWSIACIWAEMLMKTPLFPGDS 242
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+++L VI L+L+ EYA ++ Y+ + + + ++ Q+++ V +CH ++
Sbjct: 95 IIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC 153
Query: 534 IHRDLKAENLLLD----SEMNI-KIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGGA 587
+HRDLK +NLLL SE + KI DFG + F P + + Y PE+ G
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSR 213
Query: 588 PVTSS 592
++S
Sbjct: 214 HYSTS 218
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 249 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKE 305
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 306 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 365
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHR+L A N L+ +K+ADFG S T G+ G+ +
Sbjct: 366 ISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 424
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 425 TAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 482
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 483 CPEKVYELMRACWQWNPSDRPSF 505
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 376
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHR+L A N L+ +K+ADFG S T
Sbjct: 377 NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 408
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 105/205 (51%), Gaps = 18/205 (8%)
Query: 49 KLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K + +GKGNF V+L ++ P TG VA+K + + P + RE++I+K L
Sbjct: 13 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHS 70
Query: 105 PNIVKLFQVI--ETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYC 161
IVK V ++L LVMEY G + D+L H R+ QI ++Y
Sbjct: 71 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 130
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP------YAAPEL 215
++ +HRDL A N+L++SE ++KIADFG + + P +K D + P + APE
Sbjct: 131 GSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDK-DYYVVREPGQSPIFWYAPES 188
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVS 240
+ + DVWS GV+LY L +
Sbjct: 189 LSDNIFSR-QSDVWSFGVVLYELFT 212
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
++L LVMEY G + D+L H R+ QI ++Y ++ +HRDL A N+
Sbjct: 86 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 145
Query: 544 LLDSEMNIKIADFGFSN 560
L++SE ++KIADFG +
Sbjct: 146 LVESEAHVKIADFGLAK 162
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 105/205 (51%), Gaps = 18/205 (8%)
Query: 49 KLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K + +GKGNF V+L ++ P TG VA+K + + P + RE++I+K L
Sbjct: 14 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHS 71
Query: 105 PNIVKLFQVI--ETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYC 161
IVK V ++L LVMEY G + D+L H R+ QI ++Y
Sbjct: 72 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 131
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP------YAAPEL 215
++ +HRDL A N+L++SE ++KIADFG + + P +K D + P + APE
Sbjct: 132 GSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDK-DYYVVREPGQSPIFWYAPES 189
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVS 240
+ + DVWS GV+LY L +
Sbjct: 190 LSDNIFSR-QSDVWSFGVVLYELFT 213
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
++L LVMEY G + D+L H R+ QI ++Y ++ +HRDL A N+
Sbjct: 87 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 146
Query: 544 LLDSEMNIKIADFGFSN 560
L++SE ++KIADFG +
Sbjct: 147 LVESEAHVKIADFGLAK 163
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 105/205 (51%), Gaps = 18/205 (8%)
Query: 49 KLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K + +GKGNF V+L ++ P TG VA+K + + P + RE++I+K L
Sbjct: 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHS 83
Query: 105 PNIVKLFQVI--ETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYC 161
IVK V ++L LVMEY G + D+L H R+ QI ++Y
Sbjct: 84 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 143
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP------YAAPEL 215
++ +HRDL A N+L++SE ++KIADFG + + P +K D + P + APE
Sbjct: 144 GSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDK-DYYVVREPGQSPIFWYAPES 201
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVS 240
+ + DVWS GV+LY L +
Sbjct: 202 LSDNIFSR-QSDVWSFGVVLYELFT 225
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
++L LVMEY G + D+L H R+ QI ++Y ++ +HRDL A N+
Sbjct: 99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 158
Query: 544 LLDSEMNIKIADFGFSN 560
L++SE ++KIADFG +
Sbjct: 159 LVESEAHVKIADFGLAK 175
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 117/224 (52%), Gaps = 26/224 (11%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 114 IETEKTLYLVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+V EY S G + D+L + R+ + A QI S + Y + +HR
Sbjct: 248 V-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA--QIASGMAYVERMNYVHR 304
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE+T G K +P A F K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-- 362
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
DVWS G++L L + G +P+ G RE+ ++V RG YR+P
Sbjct: 363 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP 401
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQY 527
E L++L+ V+ +E+ +Y+V EY S G + D+L + R+ + A QI S + Y
Sbjct: 239 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA--QIASGMAY 295
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL+A N+L+ + K+ADFG + NE+T
Sbjct: 296 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 207 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKE 263
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 264 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 323
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHR+L A N L+ +K+ADFG S T G+ G+ +
Sbjct: 324 ISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 382
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 383 TAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 440
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 441 CPEKVYELMRACWQWNPSDRPSF 463
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 334
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPE 581
IHR+L A N L+ +K+ADFG S T G+ G+ + APE
Sbjct: 335 NFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 386
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 129/254 (50%), Gaps = 32/254 (12%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+V+EY S G + D+L G M + + QI S + Y + +HR
Sbjct: 82 V-SEEPIYIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE+T G K +P A F K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-- 196
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDC----ENLLK 277
DVWS G++L L + G +P+ G RE+ ++V RG YR+P +C +L+
Sbjct: 197 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP--CPPECPESLHDLMC 249
Query: 278 KFLVLNPAKRASLE 291
+ +P +R + E
Sbjct: 250 QCWRKDPEERPTFE 263
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQY 527
E L++L+ V+ +E+ +Y+V+EY S G + D+L G M + + QI S + Y
Sbjct: 73 EKLVQLYAVV-SEEPIYIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL+A N+L+ + K+ADFG + NE+T
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 117/224 (52%), Gaps = 26/224 (11%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 114 IETEKTLYLVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+V EY S G + D+L + R+ + A QI S + Y + +HR
Sbjct: 248 V-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA--QIASGMAYVERMNYVHR 304
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE+T G K +P A F K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-- 362
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
DVWS G++L L + G +P+ G RE+ ++V RG YR+P
Sbjct: 363 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP 401
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQY 527
E L++L+ V+ +E+ +Y+V EY S G + D+L + R+ + A QI S + Y
Sbjct: 239 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA--QIASGMAY 295
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL+A N+L+ + K+ADFG + NE+T
Sbjct: 296 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK+++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +K+L Y+VME A+ +V + H RM Q++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YLLYQMLV 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS 248
G Y VD+WS+GVI+ ++ G + F G+
Sbjct: 198 LGMGY-KENVDIWSVGVIMGEMIKGGVLFPGT 228
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 474 LLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 528
LL +F + +E + +Y+VME A+ +V + H RM Q++ +++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YLLYQMLVGIKHL 142
Query: 529 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 31/210 (14%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLF 111
+ +GKG F + H TG+ + +K + + + + + +EV++M+ L+HPN++K
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMK--ELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 112 QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQ-------IVSAVQYCHQK 164
V+ +K L + EY GG L G +K +++ + Q I S + Y H
Sbjct: 74 GVLYKDKRLNFITEYIKGG------TLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM 127
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS----NEFTPGNKLD-----------TFCGSPP 209
IIHRDL + N L+ N+ +ADFG + +E T L T G+P
Sbjct: 128 NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 210 YAAPELFQGKKYDGPEVDVWSLGVILYTLV 239
+ APE+ G+ YD +VDV+S G++L ++
Sbjct: 188 WMAPEMINGRSYD-EKVDVFSFGIVLCEII 216
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 28/134 (20%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQ-------IVSAVQ 526
+LK V+ +K L + EY GG L G +K +++ + Q I S +
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGG------TLRGIIKSMDSQYPWSQRVSFAKDIASGMA 122
Query: 527 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS----NEFTPGNKLD-----------TF 571
Y H IIHRDL + N L+ N+ +ADFG + +E T L T
Sbjct: 123 YLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 572 CGSPPYAAPELFQG 585
G+P + APE+ G
Sbjct: 183 VGNPYWMAPEMING 196
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 115/224 (51%), Gaps = 15/224 (6%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G+ + + IG G+F V K +VA+K+++ T P LQ EV +++ H
Sbjct: 12 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 68
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF---RQIVSAVQYCH 162
NI+ LF T+ L +V ++ G ++ +L H + E + RQ + Y H
Sbjct: 69 NIL-LFMGYSTKPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLH 125
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPELFQGK 219
K IIHRDLK+ N+ L + +KI DFG + + ++ ++ + GS + APE+ + +
Sbjct: 126 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 220 KYD--GPEVDVWSLGVILYTLVSGSLPFDGSTLR-ELRERVLRG 260
+ + DV++ G++LY L++G LP+ R ++ E V RG
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 229
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF---RQIVSAVQYCHQKKI 533
LF T+ L +V ++ G ++ +L H + E + RQ + Y H K I
Sbjct: 72 LFMGYSTKPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHAKSI 129
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPELFQ 584
IHRDLK+ N+ L + +KI DFG + + ++ ++ + GS + APE+ +
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK+++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +K+L Y+VME A+ +V + H RM Q++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YLLYQMLV 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS 248
G Y VD+WS+GVI+ ++ G + F G+
Sbjct: 198 LGMGY-KENVDIWSVGVIMGEMIKGGVLFPGT 228
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 474 LLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 528
LL +F + +E + +Y+VME A+ +V + H RM Q++ +++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YLLYQMLVGIKHL 142
Query: 529 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 32/254 (12%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+V EY S G + D+L G M + + QI S + Y + +HR
Sbjct: 82 V-SEEPIYIVCEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE+T G K +P A F K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-- 196
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDC----ENLLK 277
DVWS G++L L + G +P+ G RE+ ++V RG YR+P +C +L+
Sbjct: 197 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP--CPPECPESLHDLMC 249
Query: 278 KFLVLNPAKRASLE 291
+ +P +R + E
Sbjct: 250 QCWRKDPEERPTFE 263
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQY 527
E L++L+ V+ +E+ +Y+V EY S G + D+L G M + + QI S + Y
Sbjct: 73 EKLVQLYAVV-SEEPIYIVCEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL+A N+L+ + K+ADFG + NE+T
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 117/224 (52%), Gaps = 26/224 (11%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 114 IETEKTLYLVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+V EY S G + D+L + R+ + A QI S + Y + +HR
Sbjct: 248 V-SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAA--QIASGMAYVERMNYVHR 304
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE+T G K +P A F K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-- 362
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
DVWS G++L L + G +P+ G RE+ ++V RG YR+P
Sbjct: 363 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP 401
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQY 527
E L++L+ V+ +E+ +Y+V EY S G + D+L + R+ + A QI S + Y
Sbjct: 239 EKLVQLYAVV-SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAA--QIASGMAY 295
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL+A N+L+ + K+ADFG + NE+T
Sbjct: 296 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 32/254 (12%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+V EY S G + D+L G M + + QI S + Y + +HR
Sbjct: 82 V-SEEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE+T G K +P A F K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-- 196
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDC----ENLLK 277
DVWS G++L L + G +P+ G RE+ ++V RG YR+P +C +L+
Sbjct: 197 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP--CPPECPESLHDLMC 249
Query: 278 KFLVLNPAKRASLE 291
+ +P +R + E
Sbjct: 250 QCWRKDPEERPTFE 263
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQY 527
E L++L+ V+ +E+ +Y+V EY S G + D+L G M + + QI S + Y
Sbjct: 73 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL+A N+L+ + K+ADFG + NE+T
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 34/260 (13%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +K+L Y+VME A+ +V + H RM Q++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----YA 211
+++ H IIHRDLK N+++ S+ +KI DFG + T G +F +P Y
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGT---SFMMTPEVVTRYYR 192
Query: 212 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTD 271
APE+ G Y VD+WS+G I+ ++ G + F G+ + +V+ + T
Sbjct: 193 APEVILGMGYKE-NVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ-------LGTP 244
Query: 272 CENLLKKFLVLNPAKRASLE 291
C +KK L P R +E
Sbjct: 245 CPEFMKK---LQPTVRTYVE 261
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 20/122 (16%)
Query: 474 LLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 528
LL +F + +E + +Y+VME A+ +V + H RM Q++ +++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHL 142
Query: 529 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----YAAPELF 583
H IIHRDLK N+++ S+ +KI DFG + T G +F +P Y APE+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGT---SFMMTPEVVTRYYRAPEVI 197
Query: 584 QG 585
G
Sbjct: 198 LG 199
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 3 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 59
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y+++E+ + G + DYL R + + Q
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 178
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 179 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 236
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSF 259
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y+++E+ + G + DYL R + + QI SA++Y +K
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 34/266 (12%)
Query: 44 HIGKYKLLKT---IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLF-REVRIM 99
H+ YK ++ +G+G F V AK K+VAIK Q+ S +K F E+R +
Sbjct: 4 HMIDYKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIK-----QIESESERKAFIVELRQL 56
Query: 100 KMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-----RMKEKEARAKFRQI 154
++HPNIVKL+ + LVMEYA GG +++ VLHG A + Q
Sbjct: 57 SRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYN--VLHGAEPLPYYTAAHAMSWCLQC 112
Query: 155 VSAVQYCHQ---KKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPY 210
V Y H K +IHRDLK NLLL + + KI DFG + + + GS +
Sbjct: 113 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ--THMTNNKGSAAW 170
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD---GSTLRELRERVLRGKYRIPFY 267
APE+F+G Y + DV+S G+IL+ +++ PFD G R + + R P
Sbjct: 171 MAPEVFEGSNYSE-KCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WAVHNGTRPPLI 227
Query: 268 --MSTDCENLLKKFLVLNPAKRASLE 291
+ E+L+ + +P++R S+E
Sbjct: 228 KNLPKPIESLMTRCWSKDPSQRPSME 253
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 489 LVMEYASGGEVFDYLVLHG-----RMKEKEARAKFRQIVSAVQYCHQ---KKIIHRDLKA 540
LVMEYA GG +++ VLHG A + Q V Y H K +IHRDLK
Sbjct: 77 LVMEYAEGGSLYN--VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 134
Query: 541 ENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
NLLL + + KI DFG + + + GS + APE+F+G
Sbjct: 135 PNLLLVAGGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEG 178
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 4/207 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ + +G GN V H P+G +A K+I ++ P ++ RE++++ + P I
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KI 166
V + ++ + + ME+ GG + L GR+ E+ ++ + Y +K KI
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 188
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
+HRD+K N+L++S IK+ DFG S + + ++F G+ Y +PE QG Y +
Sbjct: 189 MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHY-SVQS 246
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLREL 253
D+WS+G+ L + G P +EL
Sbjct: 247 DIWSMGLSLVEMAVGRYPIPPPDAKEL 273
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-K 532
++ + ++ + + ME+ GG + L GR+ E+ ++ + Y +K K
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 187
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
I+HRD+K N+L++S IK+ DFG S + + ++F G+ Y +PE QG
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQG 239
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 32/254 (12%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 15 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+V EY S G + D+L G M + + QI S + Y + +HR
Sbjct: 71 V-SEEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 127
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE+T G K +P A F K
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-- 185
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDC----ENLLK 277
DVWS G++L L + G +P+ G RE+ ++V RG YR+P +C +L+
Sbjct: 186 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP--CPPECPESLHDLMC 238
Query: 278 KFLVLNPAKRASLE 291
+ +P +R + E
Sbjct: 239 QCWRKDPEERPTFE 252
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQY 527
E L++L+ V+ +E+ +Y+V EY S G + D+L G M + + QI S + Y
Sbjct: 62 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAY 118
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL+A N+L+ + K+ADFG + NE+T
Sbjct: 119 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 159
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 64
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y+++E+ + G + DYL R + + Q
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 183
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 184 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 241
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSF 264
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y+++E+ + G + DYL R + + QI SA++Y +K
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 4 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 60
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y+++E+ + G + DYL R + + Q
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 120
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 121 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKW 179
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 180 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 237
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 238 CPEKVYELMRACWQWNPSDRPSF 260
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y+++E+ + G + DYL R + + QI SA++Y +K
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 163
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 64
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 124
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 183
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 184 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 241
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSF 264
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREV 96
+E H+ K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+
Sbjct: 9 EERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREI 63
Query: 97 RIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQ 153
I+K L H NIVK V + + L L+MEY G + DYL H R+ + Q
Sbjct: 64 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 123
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP---- 209
I ++Y K+ IHR+L N+L+++E +KI DFG + + P +K P
Sbjct: 124 ICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT-KVLPQDKEYYKVKEPGESPI 182
Query: 210 -YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
+ APE K+ DVWS GV+LY L +
Sbjct: 183 FWYAPESLTESKFSVAS-DVWSFGVVLYELFT 213
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L L+MEY G + DYL H R+ + QI ++Y K+ IHR+L N+
Sbjct: 87 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNI 146
Query: 544 LLDSEMNIKIADFGFS 559
L+++E +KI DFG +
Sbjct: 147 LVENENRVKIGDFGLT 162
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 32/254 (12%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 17 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+V EY S G + D+L G M + + QI S + Y + +HR
Sbjct: 73 V-SEEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 129
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE+T G K +P A F K
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-- 187
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDC----ENLLK 277
DVWS G++L L + G +P+ G RE+ ++V RG YR+P +C +L+
Sbjct: 188 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP--CPPECPESLHDLMC 240
Query: 278 KFLVLNPAKRASLE 291
+ +P +R + E
Sbjct: 241 QCWRKDPEERPTFE 254
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQY 527
E L++L+ V+ +E+ +Y+V EY S G + D+L G M + + QI S + Y
Sbjct: 64 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAY 120
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL+A N+L+ + K+ADFG + NE+T
Sbjct: 121 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 161
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ F + Y APE+
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWM 194
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ F + Y APE+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIM 190
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 3 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 59
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y+++E+ + G + DYL R + + Q
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 178
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 179 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 236
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSF 259
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y+++E+ + G + DYL R + + QI SA++Y +K
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 135/283 (47%), Gaps = 54/283 (19%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HP 105
+ ++ + + +G FA V A+ V +G+E A+K + + + + +EV MK L HP
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKN--RAIIQEVCFMKKLSGHP 86
Query: 106 NIVKLFQVI-------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAK-------- 150
NIV+ +T + +L++ G++ ++L K+ E+R
Sbjct: 87 NIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFL------KKMESRGPLSCDTVLK 140
Query: 151 -FRQIVSAVQYCHQKK--IIHRDLKAENLLLDSEMNIKIADFGFSNEFT--PGNKLD--- 202
F Q AVQ+ H++K IIHRDLK ENLLL ++ IK+ DFG + + P
Sbjct: 141 IFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQR 200
Query: 203 --------TFCGSPPYAAPELFQGKKYD----GPEVDVWSLGVILYTLVSGSLPF-DGST 249
T +P Y PE+ Y G + D+W+LG ILY L PF DG+
Sbjct: 201 RALVEEEITRNTTPMYRTPEII--DLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258
Query: 250 LRELRERVLRGKYRIPFY--MSTDCENLLKKFLVLNPAKRASL 290
L R++ GKY IP + T +L++ L +NP +R S+
Sbjct: 259 L-----RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSI 296
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 17/87 (19%)
Query: 482 ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAK---------FRQIVSAVQYCHQKK 532
+T + +L++ G++ ++L K+ E+R F Q AVQ+ H++K
Sbjct: 103 DTGQAEFLLLTELCKGQLVEFL------KKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK 156
Query: 533 --IIHRDLKAENLLLDSEMNIKIADFG 557
IIHRDLK ENLLL ++ IK+ DFG
Sbjct: 157 PPIIHRDLKVENLLLSNQGTIKLCDFG 183
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ F + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
+E +YLV G + +V ++ + + QI+ ++Y H IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 541 ENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
NL ++ + +KI DFG + +++ F + Y APE+
Sbjct: 154 SNLAVNEDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIM 194
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 64
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 183
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 184 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 241
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSF 264
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 14/212 (6%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK+++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +K+L Y+VME A+ +V + H RM Q++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YLLYQMLC 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS 248
G Y VD+WS+G I+ ++ G + F G+
Sbjct: 198 LGMGY-KENVDIWSVGCIMGEMIKGGVLFPGT 228
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 474 LLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 528
LL +F + +E + +Y+VME A+ +V + H RM Q++ +++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YLLYQMLCGIKHL 142
Query: 529 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREV 96
+E H+ K L+ +GKGNF V++ ++ P TG+ VA+K + + L+ RE+
Sbjct: 11 EERHL---KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREI 65
Query: 97 RIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQ 153
I+K L H NIVK V + + L L+ME+ G + +YL H R+ + Q
Sbjct: 66 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQ 125
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP---- 209
I ++Y K+ IHRDL N+L+++E +KI DFG + + P +K P
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEXXKVKEPGESPI 184
Query: 210 -YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
+ APE K+ DVWS GV+LY L +
Sbjct: 185 FWYAPESLTESKFSVAS-DVWSFGVVLYELFT 215
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L L+ME+ G + +YL H R+ + QI ++Y K+ IHRDL N+
Sbjct: 89 RNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI 148
Query: 544 LLDSEMNIKIADFGFS 559
L+++E +KI DFG +
Sbjct: 149 LVENENRVKIGDFGLT 164
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 128/254 (50%), Gaps = 32/254 (12%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK + H +V+L+ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+V EY S G + D+L G M + + QI S + Y + +HR
Sbjct: 82 V-SEEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE+T G K +P A F K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-- 196
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDC----ENLLK 277
DVWS G++L L + G +P+ G RE+ ++V RG YR+P +C +L+
Sbjct: 197 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP--CPPECPESLHDLMC 249
Query: 278 KFLVLNPAKRASLE 291
+ +P +R + E
Sbjct: 250 QCWRKDPEERPTFE 263
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQY 527
E L++L+ V+ +E+ +Y+V EY S G + D+L G M + + QI S + Y
Sbjct: 73 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL+A N+L+ + K+ADFG + NE+T
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +K+L Y+VME A+ +V + H RM Q++
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 142
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 202
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 203 LGMGYKE-NVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 254
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 255 KK---LQPTVRTYVE 266
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 474 LLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 528
LL +F + +E + +Y+VME A+ +V + H RM Q++ +++
Sbjct: 93 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHL 147
Query: 529 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 148 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 204
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ F + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
+E +YLV G + +V ++ + + QI+ ++Y H IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 541 ENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
NL ++ + +KI DFG + +++ F + Y APE+
Sbjct: 154 SNLAVNEDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIM 194
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLIYQILRGLKY 136
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 194
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS 139
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 190
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 32/254 (12%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+V EY S G + D+L G M + + QI S + Y + +HR
Sbjct: 82 V-SEEPIYIVTEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE+T G K +P A F K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-- 196
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDC----ENLLK 277
DVWS G++L L + G +P+ G RE+ ++V RG YR+P +C +L+
Sbjct: 197 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP--CPPECPESLHDLMC 249
Query: 278 KFLVLNPAKRASLE 291
+ +P +R + E
Sbjct: 250 QCWRKDPEERPTFE 263
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQY 527
E L++L+ V+ +E+ +Y+V EY S G + D+L G M + + QI S + Y
Sbjct: 73 EKLVQLYAVV-SEEPIYIVTEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL+A N+L+ + K+ADFG + NE+T
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 34/266 (12%)
Query: 44 HIGKYKLLKT---IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLF-REVRIM 99
H+ YK ++ +G+G F V AK K+VAIK Q+ S +K F E+R +
Sbjct: 3 HMIDYKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIK-----QIESESERKAFIVELRQL 55
Query: 100 KMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-----RMKEKEARAKFRQI 154
++HPNIVKL+ + LVMEYA GG +++ VLHG A + Q
Sbjct: 56 SRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYN--VLHGAEPLPYYTAAHAMSWCLQC 111
Query: 155 VSAVQYCHQ---KKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPY 210
V Y H K +IHRDLK NLLL + + KI DFG + + + GS +
Sbjct: 112 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ--THMTNNKGSAAW 169
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD---GSTLRELRERVLRGKYRIPFY 267
APE+F+G Y + DV+S G+IL+ +++ PFD G R + + R P
Sbjct: 170 MAPEVFEGSNYSE-KCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WAVHNGTRPPLI 226
Query: 268 --MSTDCENLLKKFLVLNPAKRASLE 291
+ E+L+ + +P++R S+E
Sbjct: 227 KNLPKPIESLMTRCWSKDPSQRPSME 252
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 489 LVMEYASGGEVFDYLVLHG-----RMKEKEARAKFRQIVSAVQYCHQ---KKIIHRDLKA 540
LVMEYA GG +++ VLHG A + Q V Y H K +IHRDLK
Sbjct: 76 LVMEYAEGGSLYN--VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 133
Query: 541 ENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
NLLL + + KI DFG + + + GS + APE+F+G
Sbjct: 134 PNLLLVAGGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEG 177
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 14/212 (6%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +K+L Y+VME A+ +V + H RM Q++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YLLYQMLC 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS 248
G Y VD+WS+G I+ ++ G + F G+
Sbjct: 198 LGMGY-KENVDIWSVGCIMGEMIKGGVLFPGT 228
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 474 LLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 528
LL +F + +E + +Y+VME A+ +V + H RM Q++ +++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YLLYQMLCGIKHL 142
Query: 529 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 32/254 (12%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+V EY S G + D+L G M + + QI S + Y + +HR
Sbjct: 82 V-SEEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL A N+L+ + K+ADFG + NE+T G K +P A F K
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-- 196
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDC----ENLLK 277
DVWS G++L L + G +P+ G RE+ ++V RG YR+P +C +L+
Sbjct: 197 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP--CPPECPESLHDLMC 249
Query: 278 KFLVLNPAKRASLE 291
+ +P +R + E
Sbjct: 250 QCWRKDPEERPTFE 263
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQY 527
E L++L+ V+ +E+ +Y+V EY S G + D+L G M + + QI S + Y
Sbjct: 73 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL A N+L+ + K+ADFG + NE+T
Sbjct: 130 VERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYT 170
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 32/254 (12%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+V+EY S G + D+L G M + + QI S + Y + +HR
Sbjct: 82 V-SEEPIYIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE T G K +P A F K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS-- 196
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDC----ENLLK 277
DVWS G++L L + G +P+ G RE+ ++V RG YR+P +C +L+
Sbjct: 197 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP--CPPECPESLHDLMC 249
Query: 278 KFLVLNPAKRASLE 291
+ +P +R + E
Sbjct: 250 QCWRKDPEERPTFE 263
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQY 527
E L++L+ V+ +E+ +Y+V+EY S G + D+L G M + + QI S + Y
Sbjct: 73 EKLVQLYAVV-SEEPIYIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
+ +HRDL+A N+L+ + K+ADFG +
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 110/202 (54%), Gaps = 12/202 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH-PN 106
Y+L++ +G+G +++V A ++ ++V +KI L P K+ RE++I++ L PN
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKI-----LKPVKKNKIKREIKILENLRGGPN 93
Query: 107 IVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
I+ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ YCH
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 165 KIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
I+HRD+K N+++D E +++ D+G + + PG + + S + PEL +
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 224 PEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPF 232
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ Y
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 528 CHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH I+HRD+K N+++D E +++ D+G + + PG + + S + PEL
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 203
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 18/241 (7%)
Query: 52 KTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKMLDHPN 106
K +G G F +V + +P+ KE+++ I KT L G +K R E IM DHPN
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAI--KT-LKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
I++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
+HRDL A N+L++S + K++DFG S E P T G P + +PE +K+
Sbjct: 168 FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 222 DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
DVWS G++L+ ++S G P+ + +++ + V G YR+P M DC L + +
Sbjct: 228 TSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPM--DCPAALYQLM 283
Query: 281 V 281
+
Sbjct: 284 L 284
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGNKLDTFCGSPPYAAPELF 583
+HRDL A N+L++S + K++DFG S T G K+ SP A F
Sbjct: 168 FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 584 QGGAPVTSSG 593
+ V S G
Sbjct: 228 TSASDVWSYG 237
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 3 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 59
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 178
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 179 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 236
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSF 259
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 21/264 (7%)
Query: 42 EPHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFR 94
+P+ K+++ +T +G G + +V VA+K + + + +++ +
Sbjct: 4 DPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK 60
Query: 95 EVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR-- 152
E +MK + HPN+V+L V E Y++ E+ + G + DYL R + +
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 153 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---P 209
QI SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIK 179
Query: 210 YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PF 266
+ APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 180 WTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPE 237
Query: 267 YMSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 238 GCPEKVYELMRACWQWNPSDRPSF 261
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 164
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 18/241 (7%)
Query: 52 KTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKMLDHPN 106
K +G G F +V + +P+ KE+++ I KT L G +K R E IM DHPN
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAI--KT-LKVGYTEKQRRDFLGEASIMGQFDHPN 95
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
I++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 155
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
+HRDL A N+L++S + K++DFG S E P T G P + +PE +K+
Sbjct: 156 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 215
Query: 222 DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
DVWS G++L+ ++S G P+ + +++ + V G YR+P M DC L + +
Sbjct: 216 TSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPM--DCPAALYQLM 271
Query: 281 V 281
+
Sbjct: 272 L 272
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 155
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGNKLDTFCGSPPYAAPELF 583
+HRDL A N+L++S + K++DFG S T G K+ SP A F
Sbjct: 156 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 215
Query: 584 QGGAPVTSSG 593
+ V S G
Sbjct: 216 TSASDVWSYG 225
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 18/241 (7%)
Query: 52 KTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKMLDHPN 106
K +G G F +V + +P+ KE+++ I KT L G +K R E IM DHPN
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAI--KT-LKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
I++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 79 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
+HRDL A N+L++S + K++DFG S E P T G P + +PE +K+
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 222 DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
DVWS G++L+ ++S G P+ + +++ + V G YR+P M DC L + +
Sbjct: 199 TSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPM--DCPAALYQLM 254
Query: 281 V 281
+
Sbjct: 255 L 255
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 79 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGNKLDTFCGSPPYAAPELF 583
+HRDL A N+L++S + K++DFG S T G K+ SP A F
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 584 QGGAPVTSSG 593
+ V S G
Sbjct: 199 TSASDVWSYG 208
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 64
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 183
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 184 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 241
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSF 264
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 64
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKW 183
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 184 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 241
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSF 264
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + K + ++ +RE+R++K + H N
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 210
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 206
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 23/217 (10%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQ-LNPGSLQKLFREVRIMKMLDHPN 106
+ L +G+G A V +H TG AIK+ + L P +Q RE ++K L+H N
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKN 68
Query: 107 IVKLFQVIETEKTLY--LVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQY 160
IVKLF + E T + L+ME+ G ++ L +G + E E R +V + +
Sbjct: 69 IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVVGGMNH 127
Query: 161 CHQKKIIHRDLKAENLLL----DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+ I+HR++K N++ D + K+ DFG + E + + G+ Y P+++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMY 187
Query: 217 Q--------GKKYDGPEVDVWSLGVILYTLVSGSLPF 245
+ KKY G VD+WS+GV Y +GSLPF
Sbjct: 188 ERAVLRKDHQKKY-GATVDLWSIGVTFYHAATGSLPF 223
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 474 LLKLFQVIETEKTLY--LVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQY 527
++KLF + E T + L+ME+ G ++ L +G + E E R +V + +
Sbjct: 69 IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVVGGMNH 127
Query: 528 CHQKKIIHRDLKAENLLL----DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
+ I+HR++K N++ D + K+ DFG + E + + G+ Y P+++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMY 187
Query: 584 Q 584
+
Sbjct: 188 E 188
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 7 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 63
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 64 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 123
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 124 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 182
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 183 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 240
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 241 CPEKVYELMRACWQWNPSDRPSF 263
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 134
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 166
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 117/224 (52%), Gaps = 26/224 (11%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 19 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 114 IETEKTLYLVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+V EY S G + D+L + R+ + A QI S + Y + +HR
Sbjct: 75 V-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA--QIASGMAYVERMNYVHR 131
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE+T G K +P A F K
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-- 189
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
DVWS G++L L + G +P+ G RE+ ++V RG YR+P
Sbjct: 190 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP 228
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQY 527
E L++L+ V+ +E+ +Y+V EY S G + D+L + R+ + A QI S + Y
Sbjct: 66 EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA--QIASGMAY 122
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL+A N+L+ + K+ADFG + NE+T
Sbjct: 123 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 163
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 18/241 (7%)
Query: 52 KTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKMLDHPN 106
K +G G F +V + +P+ KE+++ I KT L G +K R E IM DHPN
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAI--KT-LKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
I++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
+HRDL A N+L++S + K++DFG S E P T G P + +PE +K+
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 222 DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
DVWS G++L+ ++S G P+ + +++ + V G YR+P M DC L + +
Sbjct: 228 TSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPM--DCPAALYQLM 283
Query: 281 V 281
+
Sbjct: 284 L 284
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGNKLDTFCGSPPYAAPELF 583
+HRDL A N+L++S + K++DFG S T G K+ SP A F
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 584 QGGAPVTSSG 593
+ V S G
Sbjct: 228 TSASDVWSYG 237
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 11/215 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y+ L+ +G G + V A TG +VAIK + + + ++ +RE+R++K + H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 108 VKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 161
+ L V ++TL YLVM + G L+ H ++ E + Q++ ++Y
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYI 144
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
H IIHRDLK NL ++ + +KI DFG + + +++ + Y APE+
Sbjct: 145 HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ--ADSEMXGXVVTRWYRAPEVILNWMR 202
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGST-LRELRE 255
VD+WS+G I+ +++G F GS L +L+E
Sbjct: 203 YTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE 237
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 472 ETLLKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 525
E ++ L V ++TL YLVM + G L+ H ++ E + Q++ +
Sbjct: 84 ENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGL 141
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+Y H IIHRDLK NL ++ + +KI DFG + + +++ + Y APE+
Sbjct: 142 RYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ--ADSEMXGXVVTRWYRAPEVILN 199
Query: 586 GAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDS 620
T + + + + T FK + +D
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ 234
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 3 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 59
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 178
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 179 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 236
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSF 259
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 218
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 214
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 14/212 (6%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +K+L Y+VME A+ +V + H RM Q++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS 248
G Y VD+WS+G I+ ++ G + F G+
Sbjct: 198 LGMGY-KENVDIWSVGCIMGEMIKGGVLFPGT 228
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 474 LLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 528
LL +F + +E + +Y+VME A+ +V + H RM Q++ +++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHL 142
Query: 529 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 14/212 (6%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +K+L Y+VME A+ +V + H RM Q++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YLLYQMLC 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS 248
G Y VD+WS+G I+ ++ G + F G+
Sbjct: 198 LGMGY-KENVDIWSVGCIMGEMIKGGVLFPGT 228
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 474 LLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 528
LL +F + +E + +Y+VME A+ +V + H RM Q++ +++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YLLYQMLCGIKHL 142
Query: 529 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +K+L Y+VME A+ +V + H RM Q++
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 131
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 192 LGMGY-KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 243
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 244 KK---LQPTVRTYVE 255
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 481 IETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDL 538
+E + +Y+VME A+ +V + H RM Q++ +++ H IIHRDL
Sbjct: 92 LEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDL 146
Query: 539 KAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
K N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 18/241 (7%)
Query: 52 KTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKMLDHPN 106
K +G G F +V + +P+ KE+++ I KT L G +K R E IM DHPN
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAI--KT-LKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
I++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
+HRDL A N+L++S + K++DFG S E P T G P + +PE +K+
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 222 DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
DVWS G++L+ ++S G P+ + +++ + V G YR+P M DC L + +
Sbjct: 228 TSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPM--DCPAALYQLM 283
Query: 281 V 281
+
Sbjct: 284 L 284
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGNKLDTFCGSPPYAAPELF 583
+HRDL A N+L++S + K++DFG S T G K+ SP A F
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 584 QGGAPVTSSG 593
+ V S G
Sbjct: 228 TSASDVWSYG 237
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 18/241 (7%)
Query: 52 KTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKMLDHPN 106
K +G G F +V + +P+ KE+++ I KT L G +K R E IM DHPN
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAI--KT-LKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
I++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
+HRDL A N+L++S + K++DFG S E P T G P + +PE +K+
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 222 DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
DVWS G++L+ ++S G P+ + +++ + V G YR+P M DC L + +
Sbjct: 228 TSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPM--DCPAALYQLM 283
Query: 281 V 281
+
Sbjct: 284 L 284
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGNKLDTFCGSPPYAAPELF 583
+HRDL A N+L++S + K++DFG S T G K+ SP A F
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 584 QGGAPVTSSG 593
+ V S G
Sbjct: 228 TSASDVWSYG 237
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 217
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 256
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 105 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 213
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 23/217 (10%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQ-LNPGSLQKLFREVRIMKMLDHPN 106
+ L +G+G A V +H TG AIK+ + L P +Q RE ++K L+H N
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKN 68
Query: 107 IVKLFQVIETEKTLY--LVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQY 160
IVKLF + E T + L+ME+ G ++ L +G + E E R +V + +
Sbjct: 69 IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVVGGMNH 127
Query: 161 CHQKKIIHRDLKAENLLL----DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+ I+HR++K N++ D + K+ DFG + E + G+ Y P+++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMY 187
Query: 217 Q--------GKKYDGPEVDVWSLGVILYTLVSGSLPF 245
+ KKY G VD+WS+GV Y +GSLPF
Sbjct: 188 ERAVLRKDHQKKY-GATVDLWSIGVTFYHAATGSLPF 223
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 474 LLKLFQVIETEKTLY--LVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQY 527
++KLF + E T + L+ME+ G ++ L +G + E E R +V + +
Sbjct: 69 IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVVGGMNH 127
Query: 528 CHQKKIIHRDLKAENLLL----DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
+ I+HR++K N++ D + K+ DFG + E + G+ Y P+++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMY 187
Query: 584 Q 584
+
Sbjct: 188 E 188
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 14/212 (6%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK+++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +K+L Y+VME A+ +V + H RM Q++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YLLYQMLV 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS 248
G Y VD+WS+G I+ ++ G + F G+
Sbjct: 198 LGMGY-KENVDIWSVGCIMGEMIKGGVLFPGT 228
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 474 LLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 528
LL +F + +E + +Y+VME A+ +V + H RM Q++ +++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YLLYQMLVGIKHL 142
Query: 529 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 18/241 (7%)
Query: 52 KTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKMLDHPN 106
K +G G F +V + +P+ KE+++ I KT L G +K R E IM DHPN
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAI--KT-LKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
I++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
+HRDL A N+L++S + K++DFG S E P T G P + +PE +K+
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 222 DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
DVWS G++L+ ++S G P+ + +++ + V G YR+P M DC L + +
Sbjct: 228 TSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPM--DCPAALYQLM 283
Query: 281 V 281
+
Sbjct: 284 L 284
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGNKLDTFCGSPPYAAPELF 583
+HRDL A N+L++S + K++DFG S T G K+ SP A F
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 584 QGGAPVTSSG 593
+ V S G
Sbjct: 228 TSASDVWSYG 237
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNWM 205
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TADEMTGYVATRWYRAPEIM 201
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 112/216 (51%), Gaps = 11/216 (5%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGK-EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
LK +G G F VK K G+ +VAIK+I + + S + E ++M L H +V
Sbjct: 28 FLKELGTGQFGVVKYGKW--RGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLV 82
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
+L+ V ++ ++++ EY + G + +YL + R + ++ + + A++Y K+ +
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 168 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKYDGPE 225
HRDL A N L++ + +K++DFG S + + P ++ PE+ K+
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
D+W+ GV+++ + S G +P++ T E E + +G
Sbjct: 203 -DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQ 530
E L++L+ V ++ ++++ EY + G + +YL + R + ++ + + A++Y
Sbjct: 79 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFS 559
K+ +HRDL A N L++ + +K++DFG S
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 18/241 (7%)
Query: 52 KTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKMLDHPN 106
K +G G F +V + +P+ KE+++ I KT L G +K R E IM DHPN
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAI--KT-LKVGYTEKQRRDFLGEASIMGQFDHPN 105
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
I++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 106 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 165
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
+HRDL A N+L++S + K++DFG S E P T G P + +PE +K+
Sbjct: 166 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 225
Query: 222 DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
DVWS G++L+ ++S G P+ + +++ + V G YR+P M DC L + +
Sbjct: 226 TSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPM--DCPAALYQLM 281
Query: 281 V 281
+
Sbjct: 282 L 282
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 106 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 165
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGNKLDTFCGSPPYAAPELF 583
+HRDL A N+L++S + K++DFG S T G K+ SP A F
Sbjct: 166 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 225
Query: 584 QGGAPVTSSG 593
+ V S G
Sbjct: 226 TSASDVWSYG 235
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 194
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 190
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 204
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 184
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 185 MTGYVATRWYRAPEIM 200
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII---DKTQLNPGSLQKLFREVRIMKMLD 103
+Y+ L +G+G FA V A+ T + VAIK I +++ G + RE+++++ L
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 104 HPNIVKLFQVIETEKTLYLVMEYA-SGGEVF---DYLVLHGRMKEKEARAKFRQIVSAVQ 159
HPNI+ L + + LV ++ + EV + LVL +A + ++
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVL----TPSHIKAYMLMTLQGLE 126
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 218
Y HQ I+HRDLK NLLLD +K+ADFG + F +P + Y APEL G
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFG 186
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPF 245
+ G VD+W++G IL L+ +PF
Sbjct: 187 ARMYGVGVDMWAVGCILAELLL-RVPF 212
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 515 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCG 573
+A + ++Y HQ I+HRDLK NLLLD +K+ADFG + F +P
Sbjct: 115 KAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV 174
Query: 574 SPPYAAPELFQGG 586
+ Y APEL G
Sbjct: 175 TRWYRAPELLFGA 187
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNWM 205
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TADE 185
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 186 MTGYVATRWYRAPEIM 201
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 5 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 61
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 122 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 180
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 181 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 238
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSF 261
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 164
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNWM 205
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TADE 185
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 186 MTGYVATRWYRAPEIM 201
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 4/207 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ + +G GN V H P+G +A K+I ++ P ++ RE++++ + P I
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KI 166
V + ++ + + ME+ GG + L GR+ E+ ++ + Y +K KI
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
+HRD+K N+L++S IK+ DFG S + + ++F G+ Y +PE QG Y +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYS-VQS 184
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLREL 253
D+WS+G+ L + G P +EL
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKEL 211
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-K 532
++ + ++ + + ME+ GG + L GR+ E+ ++ + Y +K K
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
I+HRD+K N+L++S IK+ DFG S + + ++F G+ Y +PE QG
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQG 177
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 217
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 256
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 105 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 213
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 16 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 72
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 73 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 132
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 133 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 191
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 192 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 249
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 250 CPEKVYELMRACWQWNPSDRPSF 272
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 143
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 144 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 175
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 92
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 93 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 150
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 151 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 208
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 209 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 247
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 96 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 153
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 204
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 178
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 179 MTGYVATRWYRAPEIM 194
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGYVATRWYRAPEIMLNWM 221
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 260
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 109 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGYVATRWYRAPEIM 217
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 218
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 214
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L IG G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 203
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH--TDDE 183
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 184 MTGYVATRWYRAPEIM 199
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ + +G GN V H P+G +A K+I ++ P ++ RE++++ + P I
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KI 166
V + ++ + + ME+ GG + L GR+ E+ ++ + Y +K KI
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
+HRD+K N+L++S IK+ DFG S + + ++F G+ Y +PE QG Y +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHY-SVQS 184
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELR 254
D+WS+G+ L + G P +EL
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKELE 212
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-K 532
++ + ++ + + ME+ GG + L GR+ E+ ++ + Y +K K
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
I+HRD+K N+L++S IK+ DFG S + + ++F G+ Y +PE QG
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQG 177
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 3 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 59
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 119
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 178
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 179 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 236
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSF 259
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 81 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 138
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 139 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 196
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 197 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 235
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
+E +YLV G + +V ++ + + QI+ ++Y H IIHRDLK
Sbjct: 94 LEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 151
Query: 541 ENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 152 SNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 192
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 210
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 206
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNAM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 178
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 179 MTGYVATRWYRAPEIM 194
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 210
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 206
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 200
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 196
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V + V +G ++A+K + + + ++ +RE+R++K + H N
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 111
Query: 107 IVKLFQV------IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V +E +YLV G + +V ++ + + QI+ ++Y
Sbjct: 112 VIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 169
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 170 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 227
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ ++++R
Sbjct: 228 HYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMR 266
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 150 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 207
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 208 MTGYVATRWYRAPEIM 223
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
+E +YLV G + +V ++ + + QI+ ++Y H IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 541 ENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 154 SNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 194
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 194
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
+E +YLV G + +V ++ + + QI+ ++Y H IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 541 ENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 154 SNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 194
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 3 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 59
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 119
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKW 178
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 179 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 236
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSF 259
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 200
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 196
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 115/217 (52%), Gaps = 13/217 (5%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGK-EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
LK +G G F VK K G+ +VAIK+I + + S + E ++M L H +V
Sbjct: 28 FLKELGTGQFGVVKYGKW--RGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLV 82
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
+L+ V ++ ++++ EY + G + +YL + R + ++ + + A++Y K+ +
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 168 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELFQGKKYDGP 224
HRDL A N L++ + +K++DFG S + ++ + GS ++ PE+ K+
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 225 EVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
D+W+ GV+++ + S G +P++ T E E + +G
Sbjct: 202 S-DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQ 530
E L++L+ V ++ ++++ EY + G + +YL + R + ++ + + A++Y
Sbjct: 79 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFS 559
K+ +HRDL A N L++ + +K++DFG S
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 204
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 184
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 185 MTGYVATRWYRAPEIM 200
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 194
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 221
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 260
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 201
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 202 MTGYVATRWYRAPEIM 217
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 209
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 248
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 97 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 155 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 205
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
+E +YLV G + +V ++ + + QI+ ++Y H IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 541 ENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 154 SNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 194
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 200
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 196
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 49 KLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K + +GKGNF V+L ++ P TG VA+K + + P + RE++I+K L
Sbjct: 10 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHS 67
Query: 105 PNIVKLFQVI--ETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYC 161
IVK V L LVMEY G + D+L H R+ QI ++Y
Sbjct: 68 DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 127
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----YAAPELF 216
++ +HRDL A N+L++SE ++KIADFG + + P +K P + APE
Sbjct: 128 GSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDKDXXVVREPGQSPIFWYAPESL 186
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS 240
+ + DVWS GV+LY L +
Sbjct: 187 SDNIFSR-QSDVWSFGVVLYELFT 209
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 487 LYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL 545
L LVMEY G + D+L H R+ QI ++Y ++ +HRDL A N+L+
Sbjct: 85 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 144
Query: 546 DSEMNIKIADFGFSN 560
+SE ++KIADFG +
Sbjct: 145 ESEAHVKIADFGLAK 159
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 204
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 184
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 185 MTGYVATRWYRAPEIM 200
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 194
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 178
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 179 MTGYVATRWYRAPEIM 194
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 53 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 104
Query: 99 MKMLDHPNIVKLFQVI------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 105 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 163
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S
Sbjct: 164 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 223
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 224 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 265
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S Y
Sbjct: 168 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 227
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 228 APELIFGATDYTSS 241
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 205
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 185
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 186 MTGYVATRWYRAPEIM 201
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 178
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 179 MTGYVATRWYRAPEIM 194
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 194
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 174
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 175 MTGYVATRWYRAPEIM 190
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 203
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 183
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 184 MTGYVATRWYRAPEIM 199
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 36/220 (16%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP----- 105
+ +G+G F +V A++ + AIK I T+ L + EV ++ L+H
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE---EKLSTILSEVMLLASLNHQYVVRY 67
Query: 106 --------NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR---MKEKEARAKFRQI 154
N VK ++ + TL++ MEY G ++D ++H + E FRQI
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD--LIHSENLNQQRDEYWRLFRQI 125
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-------------NEFTPG--N 199
+ A+ Y H + IIHRDLK N+ +D N+KI DFG + ++ PG +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 239
L + G+ Y A E+ G + ++D++SLG+I + ++
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 20/123 (16%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGR---MKEKEARAKFRQIVSAVQYCHQKKIIHRD 537
++ + TL++ MEY G ++D ++H + E FRQI+ A+ Y H + IIHRD
Sbjct: 84 VKKKSTLFIQMEYCENGTLYD--LIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRD 141
Query: 538 LKAENLLLDSEMNIKIADFGFS-------------NEFTPG--NKLDTFCGSPPYAAPEL 582
LK N+ +D N+KI DFG + ++ PG + L + G+ Y A E+
Sbjct: 142 LKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV 201
Query: 583 FQG 585
G
Sbjct: 202 LDG 204
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 94 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 145
Query: 99 MKMLDHPNIVKLFQVI------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 146 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 204
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S
Sbjct: 205 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 264
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 265 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S Y
Sbjct: 209 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 268
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 269 APELIFGATDYTSS 282
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 178
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 179 MTGYVATRWYRAPEIM 194
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 82 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 139
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 140 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 197
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 198 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 236
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 120 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 177
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 178 MTGYVATRWYRAPEIM 193
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 195
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 234
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 175
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 176 MTGYVATRWYRAPEIM 191
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 51 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 102
Query: 99 MKMLDHPNIVKLFQVI------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 103 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 161
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S
Sbjct: 162 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 221
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 222 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 263
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S Y
Sbjct: 166 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 225
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 226 APELIFGATDYTSS 239
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPT----GKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K ++ +G+G+F KV L + PT G+ VA+K + K P +E+ I++ L H
Sbjct: 17 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYH 75
Query: 105 PNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+I+K E EK+L LVMEY G + DYL H + + +QI + Y H
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLH 134
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--CGSPP--YAAPELFQG 218
+ IHR+L A N+LLD++ +KI DFG + G++ G P + APE +
Sbjct: 135 SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 219 KKYDGPEVDVWSLGVILYTLVS 240
K+ DVWS GV LY L++
Sbjct: 195 YKFYYAS-DVWSFGVTLYELLT 215
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 484 EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
EK+L LVMEY G + DYL H + + +QI + Y H + IHR+L A N+
Sbjct: 90 EKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNV 148
Query: 544 LLDSEMNIKIADFGFSNEFTPGNK 567
LLD++ +KI DFG + G++
Sbjct: 149 LLDNDRLVKIGDFGLAKAVPEGHE 172
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 209
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 248
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH--TDDE 189
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 190 MTGYVATRWYRAPEIM 205
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 195
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 234
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 175
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 176 MTGYVATRWYRAPEIM 191
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 4/207 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ + +G GN V H P+G +A K+I ++ P ++ RE++++ + P I
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KI 166
V + ++ + + ME+ GG + L GR+ E+ ++ + Y +K KI
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 153
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
+HRD+K N+L++S IK+ DFG S + + ++F G+ Y +PE QG Y +
Sbjct: 154 MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHY-SVQS 211
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLREL 253
D+WS+G+ L + G P +EL
Sbjct: 212 DIWSMGLSLVEMAVGRYPIPPPDAKEL 238
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 483 TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAE 541
++ + + ME+ GG + L GR+ E+ ++ + Y +K KI+HRD+K
Sbjct: 102 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 161
Query: 542 NLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
N+L++S IK+ DFG S + + ++F G+ Y +PE QG
Sbjct: 162 NILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQG 204
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 203
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDE 183
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 184 MTGYVATRWYRAPEIM 199
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 4 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 60
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 120
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 121 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKW 179
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 180 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 237
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 238 CPEKVYELMRACWQWNPSDRPSF 260
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 163
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 203
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH--TDDE 183
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 184 MTGYVATRWYRAPEIM 199
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 43 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 94
Query: 99 MKMLDHPNIVKLFQVI------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 95 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 153
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S
Sbjct: 154 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 213
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 214 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 255
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S Y
Sbjct: 158 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 217
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 218 APELIFGATDYTSS 231
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 49 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 100
Query: 99 MKMLDHPNIVKLFQVI------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 159
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S
Sbjct: 160 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 219
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S Y
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 223
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 224 APELIFGATDYTSS 237
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 21/263 (7%)
Query: 43 PHIGKYKLLKT-------IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFRE 95
P+ K+++ +T +G G + +V VA+K + + + +++ +E
Sbjct: 5 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKE 61
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--Q 153
+MK + HPN+V+L V E Y++ E+ + G + DYL R + + Q
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PY 210
I SA++Y +K IHRDL A N L+ +K+ADFG S T G+ G+ +
Sbjct: 122 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKW 180
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFY 267
APE K+ + DVW+ GV+L+ + + G P+ G L ++ E +L YR+ P
Sbjct: 181 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEG 238
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
L++ NP+ R S
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSF 261
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 164
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPT----GKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K ++ +G+G+F KV L + PT G+ VA+K + K P +E+ I++ L H
Sbjct: 17 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYH 75
Query: 105 PNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+I+K E EK+L LVMEY G + DYL H + + +QI + Y H
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLH 134
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--CGSPP--YAAPELFQG 218
+ IHR+L A N+LLD++ +KI DFG + G++ G P + APE +
Sbjct: 135 AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 219 KKYDGPEVDVWSLGVILYTLVS 240
K+ DVWS GV LY L++
Sbjct: 195 YKFYYAS-DVWSFGVTLYELLT 215
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 484 EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
EK+L LVMEY G + DYL H + + +QI + Y H + IHR+L A N+
Sbjct: 90 EKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNV 148
Query: 544 LLDSEMNIKIADFGFSNEFTPGNK 567
LLD++ +KI DFG + G++
Sbjct: 149 LLDNDRLVKIGDFGLAKAVPEGHE 172
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 121/241 (50%), Gaps = 18/241 (7%)
Query: 52 KTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKMLDHPN 106
K +G G F +V + +P+ KE+++ I KT L G +K R E IM DHPN
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAI--KT-LKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
I++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
+HRDL A N+L++S + K++DFG + E P T G P + +PE +K+
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 222 DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
DVWS G++L+ ++S G P+ + +++ + V G YR+P M DC L + +
Sbjct: 228 TSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPM--DCPAALYQLM 283
Query: 281 V 281
+
Sbjct: 284 L 284
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGNKLDTFCGSPPYAAPELF 583
+HRDL A N+L++S + K++DFG + T G K+ SP A F
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 584 QGGAPVTSSG 593
+ V S G
Sbjct: 228 TSASDVWSYG 237
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 200
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 146 ADIIHRDLKPSNLAVNEDSELKILDFGLARH--TDDEMTGYVATRWYRAPEIM 196
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDSELKILDFGLCRH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG +++ + + Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDSELKILDFGLCRH--TDDEMTGYVATRWYRAPEIM 194
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 4/207 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ + +G GN V H P+G +A K+I ++ P ++ RE++++ + P I
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KI 166
V + ++ + + ME+ GG + L GR+ E+ ++ + Y +K KI
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
+HRD+K N+L++S IK+ DFG S + + ++F G+ Y +PE QG Y +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHY-SVQS 184
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLREL 253
D+WS+G+ L + G P +EL
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKEL 211
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-K 532
++ + ++ + + ME+ GG + L GR+ E+ ++ + Y +K K
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
I+HRD+K N+L++S IK+ DFG S + + ++F G+ Y +PE QG
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQG 177
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 4/207 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ + +G GN V H P+G +A K+I ++ P ++ RE++++ + P I
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KI 166
V + ++ + + ME+ GG + L GR+ E+ ++ + Y +K KI
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
+HRD+K N+L++S IK+ DFG S + + ++F G+ Y +PE QG Y +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHY-SVQS 184
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLREL 253
D+WS+G+ L + G P +EL
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKEL 211
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-K 532
++ + ++ + + ME+ GG + L GR+ E+ ++ + Y +K K
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
I+HRD+K N+L++S IK+ DFG S + + ++F G+ Y +PE QG
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQG 177
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 4/207 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ + +G GN V +H P+G +A K+I ++ P ++ RE++++ + P I
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLI-HLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KI 166
V + ++ + + ME+ GG + L R+ E+ ++ + Y +K +I
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQI 136
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
+HRD+K N+L++S IK+ DFG S + + ++F G+ Y APE QG Y +
Sbjct: 137 MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMAPERLQGTHYS-VQS 194
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLREL 253
D+WS+G+ L L G P +EL
Sbjct: 195 DIWSMGLSLVELAVGRYPIPPPDAKEL 221
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-K 532
++ + ++ + + ME+ GG + L R+ E+ ++ + Y +K +
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ 135
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
I+HRD+K N+L++S IK+ DFG S + + ++F G+ Y APE QG
Sbjct: 136 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMAPERLQG 187
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 20 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 71
Query: 99 MKMLDHPNIVKLFQVIET------EKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 72 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 130
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S
Sbjct: 131 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 190
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 191 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 232
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S Y
Sbjct: 135 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 194
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 195 APELIFGATDYTSS 208
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + + Y APE+
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 204
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DFG + ++
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARH--TDDE 184
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 185 MTGYVATRWYRAPEIM 200
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +K+L Y+VME A+ +V + H RM Q++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + ++ + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 198 LGMGY-KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ-------LGTPCPEFM 249
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 250 KK---LQPTVRTYVE 261
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 474 LLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 528
LL +F + +E + +Y+VME A+ +V + H RM Q++ +++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHL 142
Query: 529 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + ++ + Y APE+ G
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG 199
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 26/224 (11%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGR----MKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+V EY + G + D+L G ++ + QI S + Y + +HR
Sbjct: 79 V-SEEPIYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE+T G K +P A F K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS-- 193
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
DVWS G++L L + G +P+ G RE+ ++V RG YR+P
Sbjct: 194 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP 232
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR----MKEKEARAKFRQIVSAVQY 527
E L++L+ V+ +E+ +Y+V EY + G + D+L G ++ + QI S + Y
Sbjct: 70 EKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAY 126
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL+A N+L+ + K+ADFG + NE+T
Sbjct: 127 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 167
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ +Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 105 PNIVKLFQVIETEKTL------YLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
NI+ L V +K+L Y+VME A+ +V + H RM Q++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLC 137
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + ++ + Y APE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVI 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G Y VD+WS+G I+ +V + F G + +V+ + T C +
Sbjct: 198 LGMGY-KENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ-------LGTPCPAFM 249
Query: 277 KKFLVLNPAKRASLE 291
KK L P R +E
Sbjct: 250 KK---LQPTVRNYVE 261
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 474 LLKLF---QVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 528
LL +F + +E + +Y+VME A+ +V + H RM Q++ +++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHL 142
Query: 529 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
H IIHRDLK N+++ S+ +KI DFG + ++ + Y APE+ G
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG 199
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 115/217 (52%), Gaps = 13/217 (5%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGK-EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
LK +G G F VK K G+ +VAIK+I + + S + E ++M L H +V
Sbjct: 19 FLKELGTGQFGVVKYGKW--RGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLV 73
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
+L+ V ++ ++++ EY + G + +YL + R + ++ + + A++Y K+ +
Sbjct: 74 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 133
Query: 168 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELFQGKKYDGP 224
HRDL A N L++ + +K++DFG S + ++ + GS ++ PE+ K+
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 192
Query: 225 EVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
D+W+ GV+++ + S G +P++ T E E + +G
Sbjct: 193 S-DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 228
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQ 530
E L++L+ V ++ ++++ EY + G + +YL + R + ++ + + A++Y
Sbjct: 70 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 129
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFS 559
K+ +HRDL A N L++ + +K++DFG S
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLS 158
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 18/241 (7%)
Query: 52 KTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKMLDHPN 106
K +G G F +V + +P+ KE+++ I KT L G +K R E IM DHPN
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAI--KT-LKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
I++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
+HRDL A N+L++S + K++DFG E P T G P + +PE +K+
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 222 DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
DVWS G++L+ ++S G P+ + +++ + V G YR+P M DC L + +
Sbjct: 228 TSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPM--DCPAALYQLM 283
Query: 281 V 281
+
Sbjct: 284 L 284
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGNKLDTFCGSPPYAAPELF 583
+HRDL A N+L++S + K++DFG T G K+ SP A F
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 584 QGGAPVTSSG 593
+ V S G
Sbjct: 228 TSASDVWSYG 237
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + Y APE+
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGXVATRWYRAPEIMLNWM 218
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI DFG + +++ + Y APE+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGXVATRWYRAPEIM 214
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 14/245 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G G + +V + VA+K + + + +++ +E +MK + HPN+V+L V
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQKKIIHRDL 171
E Y+V EY G + DYL R + + QI SA++Y +K IHRDL
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDL 156
Query: 172 KAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELFQGKKYDGPEVDV 228
A N L+ +K+ADFG S T G+ G+ + APE + + DV
Sbjct: 157 AARNCLVGENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNTF-SIKSDV 214
Query: 229 WSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFYMSTDCENLLKKFLVLNPA 285
W+ GV+L+ + + G P+ G L ++ + + +G YR+ P L++ +PA
Sbjct: 215 WAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKG-YRMEQPEGCPPKVYELMRACWKWSPA 273
Query: 286 KRASL 290
R S
Sbjct: 274 DRPSF 278
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y+V EY G + DYL R + + QI SA++Y +K
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK 149
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSRLMT 181
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 26/224 (11%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGR----MKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ +E+ +Y+V EY + G + D+L G ++ + QI S + Y + +HR
Sbjct: 79 V-SEEPIYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE+T G K +P A F K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKS-- 193
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
DVWS G++L L + G +P+ G RE+ ++V RG YR+P
Sbjct: 194 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP 232
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR----MKEKEARAKFRQIVSAVQY 527
E L++L+ V+ +E+ +Y+V EY + G + D+L G ++ + QI S + Y
Sbjct: 70 EKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAY 126
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
+ +HRDL+A N+L+ + K+ADFG + NE+T
Sbjct: 127 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWT 167
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 115/217 (52%), Gaps = 13/217 (5%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGK-EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
LK +G G F VK K G+ +VAIK+I + + S + E ++M L H +V
Sbjct: 12 FLKELGTGQFGVVKYGKW--RGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLV 66
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
+L+ V ++ ++++ EY + G + +YL + R + ++ + + A++Y K+ +
Sbjct: 67 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 126
Query: 168 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELFQGKKYDGP 224
HRDL A N L++ + +K++DFG S + ++ + GS ++ PE+ K+
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 225 EVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
D+W+ GV+++ + S G +P++ T E E + +G
Sbjct: 186 S-DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 221
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQ 530
E L++L+ V ++ ++++ EY + G + +YL + R + ++ + + A++Y
Sbjct: 63 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 122
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFS 559
K+ +HRDL A N L++ + +K++DFG S
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLS 151
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI D+G + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDYGLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI D+G + ++
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARH--TDDE 178
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 179 MTGYVATRWYRAPEIM 194
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 112/241 (46%), Gaps = 18/241 (7%)
Query: 52 KTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQK----LFREVRIMKMLDHPN 106
K IG G+ +V + VP ++V + I L G ++ E IM DHPN
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAI---KALKAGYTERQRRDFLSEASIMGQFDHPN 111
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
I++L V+ + +V EY G + +L H G+ + R + + ++Y
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
+HRDL A N+L+DS + K++DFG S E P T G P + APE + +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTF 231
Query: 222 DGPEVDVWSLGVILY-TLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
DVWS GV+++ L G P+ T R++ V G YR+P M C + L + +
Sbjct: 232 SSAS-DVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-YRLPAPMG--CPHALHQLM 287
Query: 281 V 281
+
Sbjct: 288 L 288
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ + +V EY G + +L H G+ + R + + ++Y
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPE 581
+HRDL A N+L+DS + K++DFG S E P T G P + APE
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPE 224
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 115/217 (52%), Gaps = 13/217 (5%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGK-EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
LK +G G F VK K G+ +VAIK+I + + S + E ++M L H +V
Sbjct: 13 FLKELGTGQFGVVKYGKW--RGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLV 67
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
+L+ V ++ ++++ EY + G + +YL + R + ++ + + A++Y K+ +
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 168 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELFQGKKYDGP 224
HRDL A N L++ + +K++DFG S + ++ + GS ++ PE+ K+
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 225 EVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
D+W+ GV+++ + S G +P++ T E E + +G
Sbjct: 187 S-DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQ 530
E L++L+ V ++ ++++ EY + G + +YL + R + ++ + + A++Y
Sbjct: 64 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFS 559
K+ +HRDL A N L++ + +K++DFG S
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 112/241 (46%), Gaps = 18/241 (7%)
Query: 52 KTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQK----LFREVRIMKMLDHPN 106
K IG G+ +V + VP ++V + I L G ++ E IM DHPN
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAI---KALKAGYTERQRRDFLSEASIMGQFDHPN 111
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
I++L V+ + +V EY G + +L H G+ + R + + ++Y
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
+HRDL A N+L+DS + K++DFG S E P T G P + APE + +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTF 231
Query: 222 DGPEVDVWSLGVILY-TLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
DVWS GV+++ L G P+ T R++ V G YR+P M C + L + +
Sbjct: 232 SSAS-DVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-YRLPAPMG--CPHALHQLM 287
Query: 281 V 281
+
Sbjct: 288 L 288
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ + +V EY G + +L H G+ + R + + ++Y
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPE 581
+HRDL A N+L+DS + K++DFG S E P T G P + APE
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPE 224
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 14/245 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G G F +V VA+K + + + +++ +E +MK + HPN+V+L V
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQKKIIHRDL 171
E Y++ E+ + G + DYL R + + QI SA++Y +K IHRDL
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 172 KAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELFQGKKYDGPEVDV 228
A N L+ +K+ADFG S T G+ G+ + APE K+ + DV
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKF-SIKSDV 193
Query: 229 WSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFYMSTDCENLLKKFLVLNPA 285
W+ GV+L+ + + G P+ G ++ E +L YR+ P L++ NP+
Sbjct: 194 WAFGVLLWEIATYGMSPYPGIDPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPS 252
Query: 286 KRASL 290
R S
Sbjct: 253 DRPSF 257
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 160
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 28 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 79
Query: 99 MKMLDHPNIVKLFQVIET------EKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 80 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 138
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S
Sbjct: 139 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 198
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 199 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 240
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S Y
Sbjct: 143 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 202
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 203 APELIFGATDYTSS 216
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 18/244 (7%)
Query: 49 KLLKTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKMLD 103
K+ + IG G F +V + +P ++VA+ I KT L G +K R E IM D
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAI--KT-LKVGYTEKQRRDFLCEASIMGQFD 102
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
HPN+V L V+ K + +V+E+ G + +L H G+ + R I + ++Y
Sbjct: 103 HPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLA 162
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQG 218
+HRDL A N+L++S + K++DFG S E P T G P + APE Q
Sbjct: 163 DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 219 KKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLK 277
+K+ DVWS G++++ ++S G P+ + +++ + + G YR+P M DC L
Sbjct: 223 RKFTSAS-DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLPAPM--DCPAGLH 278
Query: 278 KFLV 281
+ ++
Sbjct: 279 QLML 282
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
++ L V+ K + +V+E+ G + +L H G+ + R I + ++Y
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMG 165
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQ 584
+HRDL A N+L++S + K++DFG S E P T G P + APE Q
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 115/217 (52%), Gaps = 13/217 (5%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGK-EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
LK +G G F VK K G+ +VAIK+I + + S + E ++M L H +V
Sbjct: 8 FLKELGTGQFGVVKYGKW--RGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLV 62
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
+L+ V ++ ++++ EY + G + +YL + R + ++ + + A++Y K+ +
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 122
Query: 168 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELFQGKKYDGP 224
HRDL A N L++ + +K++DFG S + ++ + GS ++ PE+ K+
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 225 EVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
D+W+ GV+++ + S G +P++ T E E + +G
Sbjct: 182 S-DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 217
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQ 530
E L++L+ V ++ ++++ EY + G + +YL + R + ++ + + A++Y
Sbjct: 59 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 118
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFS 559
K+ +HRDL A N L++ + +K++DFG S
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLS 147
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHV-PTGKEVAIKIIDKTQLNPGSL-QKLFREVRIMKMLDH 104
+ +L + IG+G F V ++ P +A+ I S+ +K +E M+ DH
Sbjct: 39 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 98
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQ 163
P+IVKL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y
Sbjct: 99 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 157
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
K+ +HRD+ A N+L+ S +K+ DFG S G P + APE +++
Sbjct: 158 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 217
Query: 222 DGPEVDVWSLGVILY-TLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE----NLL 276
DVW GV ++ L+ G PF G ++ R+ G+ R+P M +C +L+
Sbjct: 218 TSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLP--MPPNCPPTLYSLM 273
Query: 277 KKFLVLNPAKR 287
K +P++R
Sbjct: 274 TKCWAYDPSRR 284
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
++KL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y K+
Sbjct: 101 IVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 159
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRD+ A N+L+ S +K+ DFG S
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLS 186
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 116/221 (52%), Gaps = 21/221 (9%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGK-EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
LK +G G F VK K G+ +VAIK+I + + S + E ++M L H +V
Sbjct: 13 FLKELGTGQFGVVKYGKW--RGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLV 67
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKII 167
+L+ V ++ ++++ EY + G + +YL + R + ++ + + A++Y K+ +
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 168 HRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKK 220
HRDL A N L++ + +K++DFG S +E+T G+K ++ PE+ K
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV-----RWSPPEVLMYSK 182
Query: 221 YDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
+ D+W+ GV+++ + S G +P++ T E E + +G
Sbjct: 183 FSSKS-DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQ 530
E L++L+ V ++ ++++ EY + G + +YL + R + ++ + + A++Y
Sbjct: 64 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFS 559
K+ +HRDL A N L++ + +K++DFG S
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPT----GKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K ++ +G+G+F KV L + PT G+ VA+K + K P RE+ I++ L H
Sbjct: 12 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KEGCGPQLRSGWQREIEILRTLYH 70
Query: 105 PNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+IVK E EK++ LVMEY G + DYL H + + +QI + Y H
Sbjct: 71 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYLH 129
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--CGSPP--YAAPELFQG 218
+ IHR L A N+LLD++ +KI DFG + G++ G P + APE +
Sbjct: 130 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 189
Query: 219 KKYDGPEVDVWSLGVILYTLVS 240
K+ DVWS GV LY L++
Sbjct: 190 CKFYYAS-DVWSFGVTLYELLT 210
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 484 EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
EK++ LVMEY G + DYL H + + +QI + Y H + IHR L A N+
Sbjct: 85 EKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNV 143
Query: 544 LLDSEMNIKIADFGFSNEFTPGNK 567
LLD++ +KI DFG + G++
Sbjct: 144 LLDNDRLVKIGDFGLAKAVPEGHE 167
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHV-PTGKEVAIKIIDKTQLNPGSL-QKLFREVRIMKMLDH 104
+ +L + IG+G F V ++ P +A+ I S+ +K +E M+ DH
Sbjct: 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 75
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQ 163
P+IVKL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y
Sbjct: 76 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 134
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
K+ +HRD+ A N+L+ S +K+ DFG S G P + APE +++
Sbjct: 135 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 194
Query: 222 DGPEVDVWSLGVILY-TLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE----NLL 276
DVW GV ++ L+ G PF G ++ R+ G+ R+P M +C +L+
Sbjct: 195 TSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLP--MPPNCPPTLYSLM 250
Query: 277 KKFLVLNPAKR 287
K +P++R
Sbjct: 251 TKCWAYDPSRR 261
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
++KL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y K+
Sbjct: 78 IVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 136
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPE 581
+HRD+ A N+L+ S +K+ DFG S G P + APE
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 187
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 14/245 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G G + +V VA+K + + + +++ +E +MK + HPN+V+L V
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQKKIIHRDL 171
E Y+++E+ + G + DYL R + + QI SA++Y +K IHRDL
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 172 KAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELFQGKKYDGPEVDV 228
A N L+ +K+ADFG S T G+ G+ + APE K+ + DV
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKF-SIKSDV 193
Query: 229 WSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFYMSTDCENLLKKFLVLNPA 285
W+ GV+L+ + + G P+ G ++ E +L YR+ P L++ NP+
Sbjct: 194 WAFGVLLWEIATYGMSPYPGIDPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPS 252
Query: 286 KRASL 290
R S
Sbjct: 253 DRPSF 257
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y+++E+ + G + DYL R + + QI SA++Y +K
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFT 563
IHRDL A N L+ +K+ADFG S T
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 160
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHV-PTGKEVAIKIIDKTQLNPGSL-QKLFREVRIMKMLDH 104
+ +L + IG+G F V ++ P +A+ I S+ +K +E M+ DH
Sbjct: 14 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 73
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQ 163
P+IVKL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y
Sbjct: 74 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 132
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
K+ +HRD+ A N+L+ S +K+ DFG S G P + APE +++
Sbjct: 133 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 192
Query: 222 DGPEVDVWSLGVILY-TLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE----NLL 276
DVW GV ++ L+ G PF G ++ R+ G+ R+P M +C +L+
Sbjct: 193 TSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLP--MPPNCPPTLYSLM 248
Query: 277 KKFLVLNPAKR 287
K +P++R
Sbjct: 249 TKCWAYDPSRR 259
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
++KL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y K+
Sbjct: 76 IVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 134
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPE 581
+HRD+ A N+L+ S +K+ DFG S G P + APE
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 185
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 18/241 (7%)
Query: 52 KTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKMLDHPN 106
K +G G F +V + +P+ KE+++ I KT L G +K R E IM DHPN
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAI--KT-LKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
I++L V+ K + +V E G + +L H + + R I S ++Y
Sbjct: 79 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
+HRDL A N+L++S + K++DFG S E P T G P + +PE +K+
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 222 DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
DVWS G++L+ ++S G P+ + +++ + V G YR+P M DC L + +
Sbjct: 199 TSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPM--DCPAALYQLM 254
Query: 281 V 281
+
Sbjct: 255 L 255
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ K + +V E G + +L H + + R I S ++Y
Sbjct: 79 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGNKLDTFCGSPPYAAPELF 583
+HRDL A N+L++S + K++DFG S T G K+ SP A F
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 584 QGGAPVTSSG 593
+ V S G
Sbjct: 199 TSASDVWSYG 208
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 26/229 (11%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSL--QKLFREVRIMKMLDHPN 106
KL K +G G F +V +A + K VA+K + PGS+ + E +MK L H
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHTK-VAVKT-----MKPGSMSVEAFLAEANVMKTLQHDK 244
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVL-HGRMKEKEARAKFR-QIVSAVQYCHQK 164
+VKL V+ T++ +Y++ E+ + G + D+L G + F QI + + Q+
Sbjct: 245 LVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQ 217
IHRDL+A N+L+ + + KIADFG + NE+T G K + APE
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI-----KWTAPEAIN 358
Query: 218 GKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ + DVWS G++L +V+ G +P+ G + E+ + RG YR+P
Sbjct: 359 FGSFT-IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMP 405
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 455 SISASNAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVL-HGRMKEKE 513
S+ A A+ + + + L+KL V+ T++ +Y++ E+ + G + D+L G +
Sbjct: 226 SVEAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP 284
Query: 514 ARAKFR-QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
F QI + + Q+ IHRDL+A N+L+ + + KIADFG + NE+T
Sbjct: 285 KLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPT----GKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K ++ +G+G+F KV L + PT G+ VA+K + K P RE+ I++ L H
Sbjct: 11 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KEGCGPQLRSGWQREIEILRTLYH 69
Query: 105 PNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+IVK E EK++ LVMEY G + DYL H + + +QI + Y H
Sbjct: 70 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYLH 128
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--CGSPP--YAAPELFQG 218
+ IHR L A N+LLD++ +KI DFG + G++ G P + APE +
Sbjct: 129 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 188
Query: 219 KKYDGPEVDVWSLGVILYTLVS 240
K+ DVWS GV LY L++
Sbjct: 189 CKFYYAS-DVWSFGVTLYELLT 209
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 484 EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
EK++ LVMEY G + DYL H + + +QI + Y H + IHR L A N+
Sbjct: 84 EKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNV 142
Query: 544 LLDSEMNIKIADFGFSNEFTPGNK 567
LLD++ +KI DFG + G++
Sbjct: 143 LLDNDRLVKIGDFGLAKAVPEGHE 166
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHV-PTGKEVAIKIIDKTQLNPGSL-QKLFREVRIMKMLDH 104
+ +L + IG+G F V ++ P +A+ I S+ +K +E M+ DH
Sbjct: 13 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 72
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQ 163
P+IVKL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y
Sbjct: 73 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 131
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
K+ +HRD+ A N+L+ S +K+ DFG S G P + APE +++
Sbjct: 132 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 191
Query: 222 DGPEVDVWSLGVILY-TLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE----NLL 276
DVW GV ++ L+ G PF G ++ R+ G+ R+P M +C +L+
Sbjct: 192 TSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLP--MPPNCPPTLYSLM 247
Query: 277 KKFLVLNPAKR 287
K +P++R
Sbjct: 248 TKCWAYDPSRR 258
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
++KL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y K+
Sbjct: 75 IVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 133
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPE 581
+HRD+ A N+L+ S +K+ DFG S G P + APE
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 184
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DFG + +++ + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGXVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
+E +YLV G + +V ++ + + QI+ ++Y H IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 541 ENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
NL ++ + +KI DFG + +++ + Y APE+
Sbjct: 154 SNLAVNEDCELKILDFGLARH--TDDEMTGXVATRWYRAPEIM 194
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 49 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 100
Query: 99 MKMLDHPNIVKLFQVI------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 159
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S
Sbjct: 160 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 219
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S Y
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 223
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 224 APELIFGATDYTSS 237
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 18/241 (7%)
Query: 52 KTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKMLDHPN 106
K +G G F +V + +P+ KE+++ I KT L G +K R E IM DHPN
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAI--KT-LKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
I++L V+ K + +V E G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
+HRDL A N+L++S + K++DFG S E P T G P + +PE +K+
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 222 DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
DVWS G++L+ ++S G P+ + +++ + V G YR+P M DC L + +
Sbjct: 228 TSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPM--DCPAALYQLM 283
Query: 281 V 281
+
Sbjct: 284 L 284
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ K + +V E G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGNKLDTFCGSPPYAAPELF 583
+HRDL A N+L++S + K++DFG S T G K+ SP A F
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 584 QGGAPVTSSG 593
+ V S G
Sbjct: 228 TSASDVWSYG 237
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 18/241 (7%)
Query: 52 KTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKMLDHPN 106
K +G G F +V + +P+ KE+++ I KT L G +K R E IM DHPN
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAI--KT-LKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
I++L V+ K + +V E G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
+HRDL A N+L++S + K++DFG S E P T G P + +PE +K+
Sbjct: 168 AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 222 DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
DVWS G++L+ ++S G P+ + +++ + V G YR+P M DC L + +
Sbjct: 228 TSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPM--DCPAALYQLM 283
Query: 281 V 281
+
Sbjct: 284 L 284
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ K + +V E G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGNKLDTFCGSPPYAAPELF 583
+HRDL A N+L++S + K++DFG S T G K+ SP A F
Sbjct: 168 AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 584 QGGAPVTSSG 593
+ V S G
Sbjct: 228 TSASDVWSYG 237
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 14/245 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G G + +V VA+K + + + +++ +E +MK + HPN+V+L V
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQKKIIHRDL 171
E Y++ E+ + G + DYL R + + QI SA++Y +K IHRDL
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 172 KAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELFQGKKYDGPEVDV 228
A N L+ +K+ADFG S T G+ G+ + APE K+ + DV
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNKF-SIKSDV 193
Query: 229 WSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI--PFYMSTDCENLLKKFLVLNPA 285
W+ GV+L+ + + G P+ G ++ E +L YR+ P L++ NP+
Sbjct: 194 WAFGVLLWEIATYGMSPYPGIDPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPS 252
Query: 286 KRASL 290
R S
Sbjct: 253 DRPSF 257
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--QIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + + QI SA++Y +K
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPE 581
IHRDL A N L+ +K+ADFG S T G+ G+ + APE
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPE 180
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 120/248 (48%), Gaps = 15/248 (6%)
Query: 53 TIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQ 112
+GKG + V + + +AIK I + + Q L E+ + K L H NIV+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 113 VIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIHR 169
+ + ME GG + L G +K+ E F +QI+ ++Y H +I+HR
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 170 DLKAENLLLDSEMNI-KIADFGFSNEFTPGNKL-DTFCGSPPYAAPELF-QGKKYDGPEV 226
D+K +N+L+++ + KI+DFG S N +TF G+ Y APE+ +G + G
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAA 206
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLR-GKYR----IPFYMSTDCENLLKKFLV 281
D+WSLG + + +G PF L E + + + G ++ IP MS + + + K
Sbjct: 207 DIWSLGCTIIEMATGKPPF--YELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFE 264
Query: 282 LNPAKRAS 289
+P KRA
Sbjct: 265 PDPDKRAC 272
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 489 LVMEYASGGEVFDYL-VLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIHRDLKAENLLL 545
+ ME GG + L G +K+ E F +QI+ ++Y H +I+HRD+K +N+L+
Sbjct: 96 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLI 155
Query: 546 DSEMNI-KIADFGFSNEFTPGNKL-DTFCGSPPYAAPELFQGG 586
++ + KI+DFG S N +TF G+ Y APE+ G
Sbjct: 156 NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 198
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 18/244 (7%)
Query: 49 KLLKTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQK----LFREVRIMKMLD 103
K+ K IG G F +V + VP +E+ + I KT L G K E IM D
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREICVAI--KT-LKAGYTDKQRRDFLSEASIMGQFD 73
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
HPNI+ L V+ K + ++ EY G + +L + GR + R I S ++Y
Sbjct: 74 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 133
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQG 218
+HRDL A N+L++S + K++DFG S E P T G P + APE
Sbjct: 134 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 219 KKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLK 277
+K+ DVWS G++++ ++S G P+ + +++ + + G YR+P M DC L
Sbjct: 194 RKFTSAS-DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLPPPM--DCPIALH 249
Query: 278 KFLV 281
+ ++
Sbjct: 250 QLML 253
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
++ L V+ K + ++ EY G + +L + GR + R I S ++Y
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 136
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPE 581
+HRDL A N+L++S + K++DFG S E P T G P + APE
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 189
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHV-PTGKEVAIKIIDKTQLNPGSL-QKLFREVRIMKMLDH 104
+ +L + IG+G F V ++ P +A+ I S+ +K +E M+ DH
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQ 163
P+IVKL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y
Sbjct: 71 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 129
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
K+ +HRD+ A N+L+ S +K+ DFG S G P + APE +++
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 222 DGPEVDVWSLGVILY-TLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE----NLL 276
DVW GV ++ L+ G PF G ++ R+ G+ R+P M +C +L+
Sbjct: 190 TSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLP--MPPNCPPTLYSLM 245
Query: 277 KKFLVLNPAKR 287
K +P++R
Sbjct: 246 TKCWAYDPSRR 256
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
++KL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y K+
Sbjct: 73 IVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 131
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPE 581
+HRD+ A N+L+ S +K+ DFG S G P + APE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 18/244 (7%)
Query: 49 KLLKTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQK----LFREVRIMKMLD 103
K+ K IG G F +V + VP +E+ + I KT L G K E IM D
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREICVAI--KT-LKAGYTDKQRRDFLSEASIMGQFD 88
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
HPNI+ L V+ K + ++ EY G + +L + GR + R I S ++Y
Sbjct: 89 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 148
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQG 218
+HRDL A N+L++S + K++DFG S E P T G P + APE
Sbjct: 149 DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 208
Query: 219 KKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLK 277
+K+ DVWS G++++ ++S G P+ + +++ + + G YR+P M DC L
Sbjct: 209 RKFTSAS-DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLPPPM--DCPIALH 264
Query: 278 KFLV 281
+ ++
Sbjct: 265 QLML 268
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
++ L V+ K + ++ EY G + +L + GR + R I S ++Y
Sbjct: 92 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 151
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPE 581
+HRDL A N+L++S + K++DFG S E P T G P + APE
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 204
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 66
Query: 99 MKMLDHPNIVKLFQVIET------EKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 125
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 190 APELIFGATDYTSS 203
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHV-PTGKEVAIKIIDKTQLNPGSL-QKLFREVRIMKMLDH 104
+ +L + IG+G F V ++ P +A+ I S+ +K +E M+ DH
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQ 163
P+IVKL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y
Sbjct: 71 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 129
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
K+ +HRD+ A N+L+ S +K+ DFG S G P + APE +++
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 222 DGPEVDVWSLGVILY-TLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE----NLL 276
DVW GV ++ L+ G PF G ++ R+ G+ R+P M +C +L+
Sbjct: 190 TSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLP--MPPNCPPTLYSLM 245
Query: 277 KKFLVLNPAKR 287
K +P++R
Sbjct: 246 TKCWAYDPSRR 256
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
++KL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y K+
Sbjct: 73 IVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 131
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPE 581
+HRD+ A N+L+ S +K+ DFG S G P + APE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 117/231 (50%), Gaps = 30/231 (12%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSL--QKLFREVRIMKMLDHPN 106
KL K +G G F +V +A + K VA+K + PGS+ + E +MK L H
Sbjct: 18 KLEKKLGAGQFGEVWMATYNKHTK-VAVK-----TMKPGSMSVEAFLAEANVMKTLQHDK 71
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----RQIVSAVQYCH 162
+VKL V+ T++ +Y++ E+ + G + D+L K+ K QI + +
Sbjct: 72 LVKLHAVV-TKEPIYIITEFMAKGSLLDFL--KSDEGSKQPLPKLIDFSAQIAEGMAFIE 128
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPEL 215
Q+ IHRDL+A N+L+ + + KIADFG + NE+T G K + APE
Sbjct: 129 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI-----KWTAPEA 183
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ + DVWS G++L +V+ G +P+ G + E+ + RG YR+P
Sbjct: 184 INFGSFTI-KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMP 232
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
Query: 455 SISASNAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEA 514
S+ A A+ + + + L+KL V+ T++ +Y++ E+ + G + D+L K+
Sbjct: 53 SVEAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFL--KSDEGSKQP 109
Query: 515 RAKF----RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
K QI + + Q+ IHRDL+A N+L+ + + KIADFG + NE+T
Sbjct: 110 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 167
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI DF + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFYLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI DF + ++
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARH--TDDE 178
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 179 MTGYVATRWYRAPEIM 194
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHV-PTGKEVAIKIIDKTQLNPGSL-QKLFREVRIMKMLDH 104
+ +L + IG+G F V ++ P +A+ I S+ +K +E M+ DH
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 67
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQ 163
P+IVKL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y
Sbjct: 68 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 126
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
K+ +HRD+ A N+L+ S +K+ DFG S G P + APE +++
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 186
Query: 222 DGPEVDVWSLGVILY-TLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE----NLL 276
DVW GV ++ L+ G PF G ++ R+ G+ R+P M +C +L+
Sbjct: 187 TSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLP--MPPNCPPTLYSLM 242
Query: 277 KKFLVLNPAKR 287
K +P++R
Sbjct: 243 TKCWAYDPSRR 253
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
++KL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y K+
Sbjct: 70 IVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 128
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRD+ A N+L+ S +K+ DFG S
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLS 155
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 18/244 (7%)
Query: 49 KLLKTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQK----LFREVRIMKMLD 103
K+ K IG G F +V + VP +E+ + I KT L G K E IM D
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAI--KT-LKAGYTDKQRRDFLSEASIMGQFD 67
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
HPNI+ L V+ K + ++ EY G + +L + GR + R I S ++Y
Sbjct: 68 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 127
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQG 218
+HRDL A N+L++S + K++DFG S E P T G P + APE
Sbjct: 128 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 219 KKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLK 277
+K+ DVWS G++++ ++S G P+ + +++ + + G YR+P M DC L
Sbjct: 188 RKFTSAS-DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLPPPM--DCPIALH 243
Query: 278 KFLV 281
+ ++
Sbjct: 244 QLML 247
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
++ L V+ K + ++ EY G + +L + GR + R I S ++Y
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 130
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPE 581
+HRDL A N+L++S + K++DFG S E P T G P + APE
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 183
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHV-PTGKEVAIKIIDKTQLNPGSL-QKLFREVRIMKMLDH 104
+ +L + IG+G F V ++ P +A+ I S+ +K +E M+ DH
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQ 163
P+IVKL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y
Sbjct: 71 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 129
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
K+ +HRD+ A N+L+ S +K+ DFG S G P + APE +++
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRF 189
Query: 222 DGPEVDVWSLGVILY-TLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE----NLL 276
DVW GV ++ L+ G PF G ++ R+ G+ R+P M +C +L+
Sbjct: 190 TSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLP--MPPNCPPTLYSLM 245
Query: 277 KKFLVLNPAKR 287
K +P++R
Sbjct: 246 TKCWAYDPSRR 256
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
++KL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y K+
Sbjct: 73 IVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 131
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPE 581
+HRD+ A N+L+ S +K+ DFG S G P + APE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE 182
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHV-PTGKEVAIKIIDKTQLNPGSL-QKLFREVRIMKMLDH 104
+ +L + IG+G F V ++ P +A+ I S+ +K +E M+ DH
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQ 163
P+IVKL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y
Sbjct: 451 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
K+ +HRD+ A N+L+ S +K+ DFG S G P + APE +++
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 222 DGPEVDVWSLGVILY-TLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE----NLL 276
DVW GV ++ L+ G PF G ++ R+ G+ R+P M +C +L+
Sbjct: 570 TSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLP--MPPNCPPTLYSLM 625
Query: 277 KKFLVLNPAKR 287
K +P++R
Sbjct: 626 TKCWAYDPSRR 636
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
++KL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y K+
Sbjct: 453 IVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 511
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPE 581
+HRD+ A N+L+ S +K+ DFG S G P + APE
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 36/220 (16%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP----- 105
+ +G+G F +V A++ + AIK I T+ L + EV ++ L+H
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE---EKLSTILSEVMLLASLNHQYVVRY 67
Query: 106 --------NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR---MKEKEARAKFRQI 154
N VK ++ + TL++ MEY ++D ++H + E FRQI
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYD--LIHSENLNQQRDEYWRLFRQI 125
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-------------NEFTPG--N 199
+ A+ Y H + IIHRDLK N+ +D N+KI DFG + ++ PG +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 239
L + G+ Y A E+ G + ++D++SLG+I + ++
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 20/123 (16%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGR---MKEKEARAKFRQIVSAVQYCHQKKIIHRD 537
++ + TL++ MEY ++D ++H + E FRQI+ A+ Y H + IIHRD
Sbjct: 84 VKKKSTLFIQMEYCENRTLYD--LIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRD 141
Query: 538 LKAENLLLDSEMNIKIADFGFS-------------NEFTPG--NKLDTFCGSPPYAAPEL 582
LK N+ +D N+KI DFG + ++ PG + L + G+ Y A E+
Sbjct: 142 LKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV 201
Query: 583 FQG 585
G
Sbjct: 202 LDG 204
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 102/202 (50%), Gaps = 13/202 (6%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPT----GKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K ++ +G+G+F KV L + PT G+ VA+K + K P +E+ I++ L H
Sbjct: 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADAGPQHRSGWKQEIDILRTLYH 92
Query: 105 PNIVKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+I+K E +L LVMEY G + DYL H + + +QI + Y H
Sbjct: 93 EHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLH 151
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--CGSPP--YAAPELFQG 218
+ IHRDL A N+LLD++ +KI DFG + G++ G P + APE +
Sbjct: 152 AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKE 211
Query: 219 KKYDGPEVDVWSLGVILYTLVS 240
K+ DVWS GV LY L++
Sbjct: 212 YKFYYAS-DVWSFGVTLYELLT 232
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL 545
+L LVMEY G + DYL H + + +QI + Y H + IHRDL A N+LL
Sbjct: 109 SLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL 167
Query: 546 DSEMNIKIADFGFSNEFTPGNK 567
D++ +KI DFG + G++
Sbjct: 168 DNDRLVKIGDFGLAKAVPEGHE 189
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI FG + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILGFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI FG + ++
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARH--TDDE 178
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 179 MTGYVATRWYRAPEIM 194
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 105/223 (47%), Gaps = 24/223 (10%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLF--REVR 97
D P Y K IG G+F V AK +G+ VAIK + LQ K F RE++
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQGKAFKNRELQ 65
Query: 98 IMKMLDHPNIVKLFQVIET------EKTLYLVMEYASGGEVFDYLVLHGRMKEK----EA 147
IM+ LDH NIV+L + E L LV++Y V+ + R K+
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYV 124
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCG 206
+ Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 207 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
S Y APEL G +DVWS G +L L+ G F G +
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 190 APELIFGATDYTSS 203
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 120/248 (48%), Gaps = 15/248 (6%)
Query: 53 TIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQ 112
+GKG + V + + +AIK I + + Q L E+ + K L H NIV+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 113 VIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIHR 169
+ + ME GG + L G +K+ E F +QI+ ++Y H +I+HR
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 132
Query: 170 DLKAENLLLDSEMNI-KIADFGFSNEFTPGNKL-DTFCGSPPYAAPELF-QGKKYDGPEV 226
D+K +N+L+++ + KI+DFG S N +TF G+ Y APE+ +G + G
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAA 192
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLR-GKYR----IPFYMSTDCENLLKKFLV 281
D+WSLG + + +G PF L E + + + G ++ IP MS + + + K
Sbjct: 193 DIWSLGCTIIEMATGKPPF--YELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFE 250
Query: 282 LNPAKRAS 289
+P KRA
Sbjct: 251 PDPDKRAC 258
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 489 LVMEYASGGEVFDYL-VLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIHRDLKAENLLL 545
+ ME GG + L G +K+ E F +QI+ ++Y H +I+HRD+K +N+L+
Sbjct: 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLI 141
Query: 546 DSEMNI-KIADFGFSNEFTPGNKL-DTFCGSPPYAAPELFQGG 586
++ + KI+DFG S N +TF G+ Y APE+ G
Sbjct: 142 NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 184
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 27 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 78
Query: 99 MKMLDHPNIVKLFQVI------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 79 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 137
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S
Sbjct: 138 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S Y
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 201
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 202 APELIFGATDYTSS 215
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 105/223 (47%), Gaps = 24/223 (10%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLF--REVR 97
D P Y K IG G+F V AK +G+ VAIK + LQ K F RE++
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQGKAFKNRELQ 65
Query: 98 IMKMLDHPNIVKLFQVIET------EKTLYLVMEYASGGEVFDYLVLHGRMKEK----EA 147
IM+ LDH NIV+L + E L LV++Y V+ + R K+
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYV 124
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCG 206
+ Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 207 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
S Y APEL G +DVWS G +L L+ G F G +
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G ++ S Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 190 APELIFGATDYTSS 203
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 27 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 78
Query: 99 MKMLDHPNIVKLFQVI------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 79 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 137
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S
Sbjct: 138 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S Y
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 201
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 202 APELIFGATDYTSS 215
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 34 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 85
Query: 99 MKMLDHPNIVKLFQVI------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 86 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 144
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S
Sbjct: 145 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 204
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 205 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 246
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S Y
Sbjct: 149 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 208
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 209 APELIFGATDYTSS 222
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 23 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 74
Query: 99 MKMLDHPNIVKLFQVI------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 75 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 133
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S
Sbjct: 134 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 193
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 194 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 235
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S Y
Sbjct: 138 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 197
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 198 APELIFGATDYTSS 211
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI D G + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDAGLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 508 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK 567
++ + + QI+ ++Y H IIHRDLK NL ++ + +KI D G + ++
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARH--TDDE 178
Query: 568 LDTFCGSPPYAAPELF 583
+ + + Y APE+
Sbjct: 179 MTGYVATRWYRAPEIM 194
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
IG G+F V K +VA+KI+ P Q EV +++ H NI+ LF
Sbjct: 44 IGSGSFGTVYKGK---WHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMG 99
Query: 114 IETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLK 172
T+ L +V ++ G ++ +L V + + + RQ + Y H K IIHRD+K
Sbjct: 100 YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMK 159
Query: 173 AENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP---EV 226
+ N+ L + +KI DFG + + ++ +++ GS + APE+ + + + P +
Sbjct: 160 SNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQD-NNPFSFQS 218
Query: 227 DVWSLGVILYTLVSGSLPF 245
DV+S G++LY L++G LP+
Sbjct: 219 DVYSYGIVLYELMTGELPY 237
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
LF T+ L +V ++ G ++ +L V + + + RQ + Y H K IIH
Sbjct: 96 LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIH 155
Query: 536 RDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPELFQ 584
RD+K+ N+ L + +KI DFG + + ++ +++ GS + APE+ +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 114/239 (47%), Gaps = 14/239 (5%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE---VAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG G F +V + GK VAIK + K + E IM DHPNI+
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKII 167
L V+ K + +V EY G + +L + G+ + R I + ++Y +
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 168 HRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKKYDG 223
HRDL A N+L++S + K++DFG S E P T G P + APE +K+
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTS 206
Query: 224 PEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLV 281
DVWS G++++ +VS G P+ T +++ + V G YR+P M DC L + ++
Sbjct: 207 AS-DVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG-YRLPSPM--DCPAALYQLML 261
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
++ L V+ K + +V EY G + +L + G+ + R I + ++Y
Sbjct: 85 IIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMG 144
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPE 581
+HRDL A N+L++S + K++DFG S E P T G P + APE
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE 197
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI D G + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDRGLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI D G + +++ + + Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDRGLARH--TDDEMTGYVATRWYRAPEIM 194
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 26/224 (11%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G+G F +V + T + VAIK + ++P + +E ++MK L H +V+L+ V
Sbjct: 16 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 114 IETEKTLYLVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ +E+ + +V EY S G + D+L + R+ + A QI S + Y + +HR
Sbjct: 72 V-SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA--QIASGMAYVERMNYVHR 128
Query: 170 DLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGKKYD 222
DL+A N+L+ + K+ADFG + NE T G K +P A F K
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS-- 186
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
DVWS G++L L + G +P+ G RE+ ++V RG YR+P
Sbjct: 187 ----DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP 225
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQY 527
E L++L+ V+ +E+ + +V EY S G + D+L + R+ + A QI S + Y
Sbjct: 63 EKLVQLYAVV-SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA--QIASGMAY 119
Query: 528 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
+ +HRDL+A N+L+ + K+ADFG +
Sbjct: 120 VERMNYVHRDLRAANILVGENLVCKVADFGLA 151
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 46/266 (17%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIM 99
K L K +G+G F +V +A+ V K+ VA+K++ K L L E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMM 94
Query: 100 KML-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRM 142
KM+ H NI+ L + LY+++EYAS G + +YL V +M
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 143 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD 202
K+ + Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNID 211
Query: 203 TF----CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRE 255
+ G P + APE + Y + DVWS GV+++ + + G P+ G + EL
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTH-QSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 256 RVLRGKYRIP---------FYMSTDC 272
++L+ +R+ + M DC
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDC 295
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL V +M K+ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF 571
Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNIDYY 213
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 46/261 (17%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIMKML-D 103
K +G+G F +V LA+ + K+ VA+K++ K+ L L E+ +MKM+
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGK 84
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEA 147
H NI+ L + LY+++EYAS G + +YL ++ K+
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--- 204
+ Q+ ++Y KK IHRDL A N+L+ + +KIADFG + + + +D +
Sbjct: 145 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDYYKKT 201
Query: 205 -CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
G P + APE + Y + DVWS GV+L+ + + G P+ G + EL ++L+
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTH-QSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLLKE 259
Query: 261 KYRIP---------FYMSTDC 272
+R+ + M DC
Sbjct: 260 GHRMDKPSNCTNELYMMMRDC 280
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL ++ K+ +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
Q+ ++Y KK IHRDL A N+L+ + +KIADFG + +
Sbjct: 148 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 192
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 46/261 (17%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIMKML-D 103
K +G+G F +V LA+ + K+ VA+K++ K+ L L E+ +MKM+
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGK 92
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEA 147
H NI+ L + LY+++EYAS G + +YL ++ K+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD----T 203
+ Q+ ++Y KK IHRDL A N+L+ + +KIADFG + + + +D T
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDXXKKT 209
Query: 204 FCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
G P + APE + Y + DVWS GV+L+ + + G P+ G + EL ++L+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTH-QSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLLKE 267
Query: 261 KYRIP---------FYMSTDC 272
+R+ + M DC
Sbjct: 268 GHRMDKPSNCTNELYMMMRDC 288
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL ++ K+ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
Q+ ++Y KK IHRDL A N+L+ + +KIADFG + +
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 36/238 (15%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIM 99
K L K +G+G F +V +A+ V K+ VA+K++ K L L E+ +M
Sbjct: 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMM 140
Query: 100 KML-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRM 142
KM+ H NI+ L + LY+++EYAS G + +YL V +M
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 143 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD 202
K+ + Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNID 257
Query: 203 TF----CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLREL 253
+ G P + APE + Y + DVWS GV+++ + + G P+ G + EL
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTH-QSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL V +M K+ +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF 571
Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D +
Sbjct: 209 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNIDYY 259
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 46/261 (17%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIMKML-D 103
K +G+G F +V LA+ + K+ VA+K++ K+ L L E+ +MKM+
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGK 133
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEA 147
H NI+ L + LY+++EYAS G + +YL ++ K+
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--- 204
+ Q+ ++Y KK IHRDL A N+L+ + +KIADFG + + + +D +
Sbjct: 194 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDYYKKT 250
Query: 205 -CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
G P + APE + Y + DVWS GV+L+ + + G P+ G + EL ++L+
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTH-QSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLLKE 308
Query: 261 KYRIP---------FYMSTDC 272
+R+ + M DC
Sbjct: 309 GHRMDKPSNCTNELYMMMRDC 329
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL ++ K+ +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
Q+ ++Y KK IHRDL A N+L+ + +KIADFG + +
Sbjct: 197 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 241
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 10/219 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 107 IVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++ L V ++L YLV G + +V ++ + + QI+ ++Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK NL ++ + +KI D G + +++ + + Y APE+
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDGGLARH--TDDEMTGYVATRWYRAPEIMLNWM 198
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
+ VD+WS+G I+ L++G F G+ + + +LR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 474 LLKLF---QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
LL +F + +E +YLV G + +V ++ + + QI+ ++Y H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
IIHRDLK NL ++ + +KI D G + +++ + + Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDGGLARH--TDDEMTGYVATRWYRAPEIM 194
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 19 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 70
Query: 99 MKMLDHPNIVKLFQVIET------EKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 71 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 129
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S
Sbjct: 130 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 189
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 190 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 231
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S Y
Sbjct: 134 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 193
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 194 APELIFGATDYTSS 207
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLF--REVR 97
D P Y K IG G+F V AK +G+ VAIK + LQ K F RE++
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQGKAFKNRELQ 65
Query: 98 IMKMLDHPNIVKLFQVIET------EKTLYLVMEYASGGEVFDYLVLHGRMKEK----EA 147
IM+ LDH NIV+L + E L LV++Y V+ + R K+
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPA-TVYRVARHYSRAKQTLPVIYV 124
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCG 206
+ Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G +
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 207 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
S Y APEL G +DVWS G +L L+ G F G +
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 484 EKTLYLVMEYASGGEVFDYLVLHGRMKEK----EARAKFRQIVSAVQYCHQKKIIHRDLK 539
E L LV++Y V+ + R K+ + Q+ ++ Y H I HRD+K
Sbjct: 91 EVYLNLVLDYVPA-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149
Query: 540 AENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSS 592
+NLLLD + + K+ DFG + + G + S Y APEL G TSS
Sbjct: 150 PQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 203
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 113/222 (50%), Gaps = 22/222 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSL--QKLFREVRIMKMLDHPN 106
KL K +G G F +V +A + K VA+K + PGS+ + E +MK L H
Sbjct: 185 KLEKKLGAGQFGEVWMATYNKHTK-VAVKT-----MKPGSMSVEAFLAEANVMKTLQHDK 238
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVL-HGRMKEKEARAKFR-QIVSAVQYCHQK 164
+VKL V+ T++ +Y++ E+ + G + D+L G + F QI + + Q+
Sbjct: 239 LVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 297
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
IHRDL+A N+L+ + + KIADFG + G K + APE +
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLAR---VGAKFPI-----KWTAPEAINFGSFT-I 348
Query: 225 EVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ DVWS G++L +V+ G +P+ G + E+ + RG YR+P
Sbjct: 349 KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMP 389
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 455 SISASNAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVL-HGRMKEKE 513
S+ A A+ + + + L+KL V+ T++ +Y++ E+ + G + D+L G +
Sbjct: 220 SVEAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP 278
Query: 514 ARAKFR-QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
F QI + + Q+ IHRDL+A N+L+ + + KIADFG +
Sbjct: 279 KLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 325
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 66
Query: 99 MKMLDHPNIVKLFQVIET------EKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 125
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 190 APELIFGATDYTSS 203
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 46/261 (17%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIMKML-D 103
K +G+G F +V LA+ + K+ VA+K++ K+ L L E+ +MKM+
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGK 92
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEA 147
H NI+ L + LY+++EYAS G + +YL ++ K+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--- 204
+ Q+ ++Y KK IHRDL A N+L+ + +KIADFG + + + +D +
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDYYKKT 209
Query: 205 -CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
G P + APE + Y + DVWS GV+L+ + + G P+ G + EL ++L+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTH-QSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLLKE 267
Query: 261 KYRIP---------FYMSTDC 272
+R+ + M DC
Sbjct: 268 GHRMDKPSNCTNELYMMMRDC 288
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL ++ K+ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
Q+ ++Y KK IHRDL A N+L+ + +KIADFG + +
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 46/266 (17%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIM 99
K L K +G+G F +V +A+ V K+ VA+K++ K L L E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMM 94
Query: 100 KML-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRM 142
KM+ H NI+ L + LY+++EYAS G + +YL V +M
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 143 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD 202
K+ + Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNID 211
Query: 203 ----TFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRE 255
T G P + APE + Y + DVWS GV+++ + + G P+ G + EL
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTH-QSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 256 RVLRGKYRIP---------FYMSTDC 272
++L+ +R+ + M DC
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDC 295
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL V +M K+ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
Q+ ++Y +K IHRDL A N+L+ +KIADFG + +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 46/261 (17%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIMKML-D 103
K +G+G F +V LA+ + K+ VA+K++ K+ L L E+ +MKM+
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGK 81
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEA 147
H NI+ L + LY+++EYAS G + +YL ++ K+
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--- 204
+ Q+ ++Y KK IHRDL A N+L+ + +KIADFG + + + +D +
Sbjct: 142 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDYYKKT 198
Query: 205 -CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
G P + APE + Y + DVWS GV+L+ + + G P+ G + EL ++L+
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTH-QSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLLKE 256
Query: 261 KYRIP---------FYMSTDC 272
+R+ + M DC
Sbjct: 257 GHRMDKPSNCTNELYMMMRDC 277
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL ++ K+ +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
Q+ ++Y KK IHRDL A N+L+ + +KIADFG + +
Sbjct: 145 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 189
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 46/261 (17%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIMKML-D 103
K +G+G F +V LA+ + K+ VA+K++ K+ L L E+ +MKM+
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGK 92
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEA 147
H NI+ L + LY+++EYAS G + +YL ++ K+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--- 204
+ Q+ ++Y KK IHRDL A N+L+ + +KIADFG + + + +D +
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDYYKKT 209
Query: 205 -CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
G P + APE + Y + DVWS GV+L+ + + G P+ G + EL ++L+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTH-QSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLLKE 267
Query: 261 KYRIP---------FYMSTDC 272
+R+ + M DC
Sbjct: 268 GHRMDKPSNCTNELYMMMRDC 288
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL ++ K+ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
Q+ ++Y KK IHRDL A N+L+ + +KIADFG + +
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 46/266 (17%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIM 99
K L K +G+G F +V +A+ V K+ VA+K++ K L L E+ +M
Sbjct: 28 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMM 86
Query: 100 KML-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRM 142
KM+ H NI+ L + LY+++EYAS G + +YL V +M
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 143 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD 202
K+ + Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNID 203
Query: 203 TF----CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRE 255
+ G P + APE + Y + DVWS GV+++ + + G P+ G + EL
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTH-QSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 261
Query: 256 RVLRGKYRIP---------FYMSTDC 272
++L+ +R+ + M DC
Sbjct: 262 KLLKEGHRMDKPANCTNELYMMMRDC 287
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL V +M K+ +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF 571
Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D +
Sbjct: 155 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNIDYY 205
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 46/266 (17%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIM 99
K L K +G+G F +V +A+ V K+ VA+K++ K L L E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEEDLSDLVSEMEMM 94
Query: 100 KML-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRM 142
KM+ H NI+ L + LY+++EYAS G + +YL V +M
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 143 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD 202
K+ + Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNID 211
Query: 203 TF----CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRE 255
+ G P + APE + Y + DVWS GV+++ + + G P+ G + EL
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTH-QSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 256 RVLRGKYRIP---------FYMSTDC 272
++L+ +R+ + M DC
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDC 295
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL V +M K+ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF 571
Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNIDYY 213
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 46/261 (17%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIMKML-D 103
K +G+G F +V LA+ + K+ VA+K++ K+ L L E+ +MKM+
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGK 85
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEA 147
H NI+ L + LY+++EYAS G + +YL ++ K+
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--- 204
+ Q+ ++Y KK IHRDL A N+L+ + +KIADFG + + + +D +
Sbjct: 146 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDYYKKT 202
Query: 205 -CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
G P + APE + Y + DVWS GV+L+ + + G P+ G + EL ++L+
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTH-QSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLLKE 260
Query: 261 KYRIP---------FYMSTDC 272
+R+ + M DC
Sbjct: 261 GHRMDKPSNCTNELYMMMRDC 281
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL ++ K+ +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
Q+ ++Y KK IHRDL A N+L+ + +KIADFG + +
Sbjct: 149 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 193
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 46/266 (17%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIM 99
K L K +G+G F +V +A+ V K+ VA+K++ K L L E+ +M
Sbjct: 25 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMM 83
Query: 100 KML-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRM 142
KM+ H NI+ L + LY+++EYAS G + +YL V +M
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 143 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD 202
K+ + Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNID 200
Query: 203 TF----CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRE 255
+ G P + APE + Y + DVWS GV+++ + + G P+ G + EL
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTH-QSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 258
Query: 256 RVLRGKYRIP---------FYMSTDC 272
++L+ +R+ + M DC
Sbjct: 259 KLLKEGHRMDKPANCTNELYMMMRDC 284
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL V +M K+ +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF 571
Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D +
Sbjct: 152 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNIDYY 202
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 16 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 67
Query: 99 MKMLDHPNIVKLFQVIET------EKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 68 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 126
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S
Sbjct: 127 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 186
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 187 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 228
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S Y
Sbjct: 131 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 190
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 191 APELIFGATDYTSS 204
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHV-PTGKEVAIKIIDKTQLNPGSL-QKLFREVRIMKMLDH 104
+ +L + IG+G F V ++ P +A+ I S+ +K +E M+ DH
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQ 163
P+IVKL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y
Sbjct: 451 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
K+ +HRD+ A N+L+ + +K+ DFG S G P + APE +++
Sbjct: 510 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 222 DGPEVDVWSLGVILY-TLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE----NLL 276
DVW GV ++ L+ G PF G ++ R+ G+ R+P M +C +L+
Sbjct: 570 TSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLP--MPPNCPPTLYSLM 625
Query: 277 KKFLVLNPAKR 287
K +P++R
Sbjct: 626 TKCWAYDPSRR 636
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
++KL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y K+
Sbjct: 453 IVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 511
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPE 581
+HRD+ A N+L+ + +K+ DFG S G P + APE
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 66
Query: 99 MKMLDHPNIVKLFQVIET------EKTLYLVMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E L LV++Y V+ + R K+ +
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 125
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 190 APELIFGATDYTSS 203
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 46/266 (17%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIM 99
K L K +G+G F +V +A+ V K+ VA+K++ K L L E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMM 94
Query: 100 KML-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRM 142
KM+ H NI+ L + LY+++EYAS G + +YL V +M
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 143 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD 202
K+ + Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNID 211
Query: 203 ----TFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRE 255
T G P + APE + Y + DVWS GV+++ + + G P+ G + EL
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTH-QSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 256 RVLRGKYRIP---------FYMSTDC 272
++L+ +R+ + M DC
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDC 295
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL V +M K+ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
Q+ ++Y +K IHRDL A N+L+ +KIADFG + +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 46/266 (17%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIM 99
K L K +G+G F +V +A+ V K+ VA+K++ K L L E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMM 94
Query: 100 KML-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRM 142
KM+ H NI+ L + LY+++EYAS G + +YL V +M
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 143 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD 202
K+ + Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNID 211
Query: 203 TF----CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRE 255
+ G P + APE + Y + DVWS GV+++ + + G P+ G + EL
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTH-QSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 256 RVLRGKYRIP---------FYMSTDC 272
++L+ +R+ + M DC
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDC 295
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL V +M K+ +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF 571
Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNIDYY 213
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHV-PTGKEVAIKIIDKTQLNPGSL-QKLFREVRIMKMLDH 104
+ +L + IG+G F V ++ P +A+ I S+ +K +E M+ DH
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQ 163
P+IVKL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y
Sbjct: 71 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 129
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKY 221
K+ +HRD+ A N+L+ + +K+ DFG S G P + APE +++
Sbjct: 130 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 222 DGPEVDVWSLGVILY-TLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE----NLL 276
DVW GV ++ L+ G PF G ++ R+ G+ R+P M +C +L+
Sbjct: 190 TSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLP--MPPNCPPTLYSLM 245
Query: 277 KKFLVLNPAKR 287
K +P++R
Sbjct: 246 TKCWAYDPSRR 256
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
++KL VI TE ++++ME + GE+ +L + + + + Q+ +A+ Y K+
Sbjct: 73 IVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 131
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRD+ A N+L+ + +K+ DFG S
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLS 158
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 46/266 (17%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIM 99
K L K +G+G F +V +A+ V K+ VA+K++ K L L E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMM 94
Query: 100 KML-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRM 142
KM+ H NI+ L + LY+++EYAS G + +YL V +M
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 143 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD 202
K+ + Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNID 211
Query: 203 TF----CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRE 255
+ G P + APE + Y + DVWS GV+++ + + G P+ G + EL
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTH-QSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 256 RVLRGKYRIP---------FYMSTDC 272
++L+ +R+ + M DC
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDC 295
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL V +M K+ +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF 571
Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNIDYY 213
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 46/261 (17%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIMKML-D 103
K +G+G F +V LA+ + K+ VA+K++ K+ L L E+ +MKM+
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGK 77
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEA 147
H NI+ L + LY+++EYAS G + +YL ++ K+
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--- 204
+ Q+ ++Y KK IHRDL A N+L+ + +KIADFG + + + +D +
Sbjct: 138 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDYYKKT 194
Query: 205 -CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
G P + APE + Y + DVWS GV+L+ + + G P+ G + EL ++L+
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTH-QSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLLKE 252
Query: 261 KYRIP---------FYMSTDC 272
+R+ + M DC
Sbjct: 253 GHRMDKPSNCTNELYMMMRDC 273
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL ++ K+ +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
Q+ ++Y KK IHRDL A N+L+ + +KIADFG + +
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 185
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 22/222 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRI 98
D P Y K IG G+F V AK +G+ VAIK + DK N RE++I
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQI 66
Query: 99 MKMLDHPNIVKL----FQVIETEKTLYL--VMEYASGGEVFDYLVLHGRMKEK----EAR 148
M+ LDH NIV+L + E + +YL V++Y V+ + R K+ +
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 125
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGS 207
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y APEL G +DVWS G +L L+ G F G +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYA 578
Q+ ++ Y H I HRD+K +NLLLD + + K+ DFG + + G + S Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 579 APELFQGGAPVTSS 592
APEL G TSS
Sbjct: 190 APELIFGATDYTSS 203
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 46/261 (17%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIMKML-D 103
K +G+G F +V LA+ + K+ VA+K++ K+ L L E+ +MKM+
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGK 92
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEA 147
H NI+ L + LY+++EYAS G + +YL ++ K+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--- 204
+ Q+ ++Y KK IHRDL A N+L+ + +KIADFG + + + +D +
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDYYKKT 209
Query: 205 -CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
G P + APE + Y + DVWS GV+L+ + + G P+ G + EL ++L+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTH-QSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLLKE 267
Query: 261 KYRIP---------FYMSTDC 272
+R+ + M DC
Sbjct: 268 GHRMDKPSNCTNELYMMMRDC 288
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVL----------------HGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL ++ K+ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
Q+ ++Y KK IHRDL A N+L+ + +KIADFG + +
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 46/266 (17%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIM 99
K L K +G+G F +V +A+ V K+ VA+K++ K L L E+ +M
Sbjct: 23 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMM 81
Query: 100 KML-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRM 142
KM+ H NI+ L + LY+++EYAS G + +YL V +M
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 143 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD 202
K+ + Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDI---NNID 198
Query: 203 TF----CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRE 255
+ G P + APE + Y + DVWS GV+++ + + G P+ G + EL
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTH-QSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 256
Query: 256 RVLRGKYRIP---------FYMSTDC 272
++L+ +R+ + M DC
Sbjct: 257 KLLKEGHRMDKPANCTNELYMMMRDC 282
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL V +M K+ +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF 571
Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D +
Sbjct: 150 TYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDI---NNIDYY 200
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 117/226 (51%), Gaps = 22/226 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KL++ +G G F +V + + K VA+K + + ++P + E +MK L H +V
Sbjct: 26 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLV 81
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCHQKKI 166
+L+ V+ T++ +Y++ EY G + D+L +K + QI + + ++
Sbjct: 82 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 140
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGK 219
IHRDL+A N+L+ ++ KIADFG + NE+T G K + APE
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-----KWTAPEAINYG 195
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
+ + DVWS G++L +V+ G +P+ G T E+ + + RG YR+
Sbjct: 196 TFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM 239
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCH 529
+ L++L+ V+ T++ +Y++ EY G + D+L +K + QI + +
Sbjct: 78 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
++ IHRDL+A N+L+ ++ KIADFG + NE+T
Sbjct: 137 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 175
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 95/207 (45%), Gaps = 12/207 (5%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
K L IG+G + V H P+G+ +A+K I T Q L +M+ D P IV
Sbjct: 25 KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIV 84
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFD------YLVLHGRMKEKEARAKFRQIVSAVQYCH 162
+ + + E ++ ME S FD Y VL + E+ V A+ +
Sbjct: 85 QFYGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK 142
Query: 163 QK-KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ-GKK 220
+ KIIHRD+K N+LLD NIK+ DFG S + G PY APE
Sbjct: 143 ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSAS 202
Query: 221 YDGPEV--DVWSLGVILYTLVSGSLPF 245
G +V DVWSLG+ LY L +G P+
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFPY 229
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 468 SSGGETLLKLFQVIETEKTLYLVMEYASGGEVFD------YLVLHGRMKEKEARAKFRQI 521
SS +++ + + E ++ ME S FD Y VL + E+
Sbjct: 77 SSDCPYIVQFYGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLAT 134
Query: 522 VSAVQYCHQK-KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 580
V A+ + + KIIHRD+K N+LLD NIK+ DFG S + G PY AP
Sbjct: 135 VKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAP 194
Query: 581 E 581
E
Sbjct: 195 E 195
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 126/266 (47%), Gaps = 46/266 (17%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIM 99
K L K +G+G F +V +A+ V K+ VA+K++ K L L E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMM 94
Query: 100 KML-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRM 142
KM+ H NI+ L + LY+++EYAS G + +YL V +M
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 143 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD 202
K+ + Q+ ++Y +K IHRDL A N+L+ ++IADFG + + N +D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDI---NNID 211
Query: 203 TF----CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRE 255
+ G P + APE + Y + DVWS GV+++ + + G P+ G + EL
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTH-QSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 256 RVLRGKYRIP---------FYMSTDC 272
++L+ +R+ + M DC
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDC 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARAK 517
++ L + LY+++EYAS G + +YL V +M K+ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF 571
Q+ ++Y +K IHRDL A N+L+ ++IADFG + + N +D +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDI---NNIDYY 213
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVK 109
++ IG G F V L + K VAIK I + + S + E +M L HP +V+
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQ 66
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 168
L+ V + + LV E+ G + DYL G + + + Y + +IH
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIH 126
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELFQGKKYDGPE 225
RDL A N L+ IK++DFG + F ++ + G+ +A+PE+F +Y
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
DVWS GV+++ + S G +P++ + E+ E + G
Sbjct: 186 -DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 220
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKK 532
L++L+ V + + LV E+ G + DYL G + + + Y +
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS 123
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELF 583
+IHRDL A N L+ IK++DFG + F ++ + G+ +A+PE+F
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 176
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 116/249 (46%), Gaps = 26/249 (10%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y LK +G G V A K VAIK I T +P S++ RE++I++ LDH N
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDN 69
Query: 107 IVKLFQVI-------------ETE-KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR 152
IVK+F+++ TE ++Y+V EY ++ G + E+ AR
Sbjct: 70 IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLEEHARLFMY 127
Query: 153 QIVSAVQYCHQKKIIHRDLKAENLLLDSE-MNIKIADFGFSNEFTPG----NKLDTFCGS 207
Q++ ++Y H ++HRDLK NL +++E + +KI DFG + P L +
Sbjct: 128 QLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFY 267
Y +P L +D+W+ G I +++G F G+ E + +L IP
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES---IPVV 244
Query: 268 MSTDCENLL 276
D + LL
Sbjct: 245 HEEDRQELL 253
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 486 TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL 545
++Y+V EY ++ G + E+ AR Q++ ++Y H ++HRDLK NL +
Sbjct: 96 SVYIVQEYMETD--LANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFI 153
Query: 546 DSE-MNIKIADFGFSNEFTP 564
++E + +KI DFG + P
Sbjct: 154 NTEDLVLKIGDFGLARIMDP 173
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 117/226 (51%), Gaps = 22/226 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KL++ +G G F +V + + K VA+K + + ++P + E +MK L H +V
Sbjct: 22 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLV 77
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCHQKKI 166
+L+ V+ T++ +Y++ EY G + D+L +K + QI + + ++
Sbjct: 78 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGK 219
IHRDL+A N+L+ ++ KIADFG + NE+T G K + APE
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-----KWTAPEAINYG 191
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
+ + DVWS G++L +V+ G +P+ G T E+ + + RG YR+
Sbjct: 192 TFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM 235
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCH 529
+ L++L+ V+ T++ +Y++ EY G + D+L +K + QI + +
Sbjct: 74 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
++ IHRDL+A N+L+ ++ KIADFG + NE+T
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 171
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 117/226 (51%), Gaps = 22/226 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KL++ +G G F +V + + K VA+K + + ++P + E +MK L H +V
Sbjct: 21 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLV 76
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCHQKKI 166
+L+ V+ T++ +Y++ EY G + D+L +K + QI + + ++
Sbjct: 77 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 135
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGK 219
IHRDL+A N+L+ ++ KIADFG + NE+T G K + APE
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-----KWTAPEAINYG 190
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
+ + DVWS G++L +V+ G +P+ G T E+ + + RG YR+
Sbjct: 191 TFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM 234
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCH 529
+ L++L+ V+ T++ +Y++ EY G + D+L +K + QI + +
Sbjct: 73 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
++ IHRDL+A N+L+ ++ KIADFG + NE+T
Sbjct: 132 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 170
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 117/226 (51%), Gaps = 22/226 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KL++ +G G F +V + + K VA+K + + ++P + E +MK L H +V
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLV 71
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCHQKKI 166
+L+ V+ T++ +Y++ EY G + D+L +K + QI + + ++
Sbjct: 72 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGK 219
IHRDL+A N+L+ ++ KIADFG + NE+T G K + APE
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-----KWTAPEAINYG 185
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
+ + DVWS G++L +V+ G +P+ G T E+ + + RG YR+
Sbjct: 186 TFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM 229
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCH 529
+ L++L+ V+ T++ +Y++ EY G + D+L +K + QI + +
Sbjct: 68 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
++ IHRDL+A N+L+ ++ KIADFG + NE+T
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 117/226 (51%), Gaps = 22/226 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KL++ +G G F +V + + K VA+K + + ++P + E +MK L H +V
Sbjct: 11 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLV 66
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCHQKKI 166
+L+ V+ T++ +Y++ EY G + D+L +K + QI + + ++
Sbjct: 67 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 125
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGK 219
IHRDL+A N+L+ ++ KIADFG + NE+T G K + APE
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-----KWTAPEAINYG 180
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
+ + DVWS G++L +V+ G +P+ G T E+ + + RG YR+
Sbjct: 181 TFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM 224
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCH 529
+ L++L+ V+ T++ +Y++ EY G + D+L +K + QI + +
Sbjct: 63 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
++ IHRDL+A N+L+ ++ KIADFG + NE+T
Sbjct: 122 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 160
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 17/205 (8%)
Query: 49 KLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K ++ +G+G+F KV+L ++ P TG++VA+K + K + + L +E+ I++ L H
Sbjct: 24 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYH 82
Query: 105 PNIVKLFQVIETEKT---LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR-QIVSAVQY 160
NIVK ++ I TE + L+ME+ G + +YL + + + K+ QI + Y
Sbjct: 83 ENIVK-YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 141
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFC---GSPPY-AAPE-L 215
++ +HRDL A N+L++SE +KI DFG + + T SP + APE L
Sbjct: 142 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVS 240
Q K Y DVWS GV L+ L++
Sbjct: 202 MQSKFYIAS--DVWSFGVTLHELLT 224
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 21/120 (17%)
Query: 461 AKPSRRASSGGETLLKLFQVIETEKTLY--------------------LVMEYASGGEVF 500
A S + SGG + L + IE + LY L+ME+ G +
Sbjct: 54 AVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLK 113
Query: 501 DYLVLHGRMKEKEARAKFR-QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
+YL + + + K+ QI + Y ++ +HRDL A N+L++SE +KI DFG +
Sbjct: 114 EYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 173
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 116/228 (50%), Gaps = 13/228 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEV----AIKIIDKTQLNPGSLQKLFREVRIMKML 102
+ K +K +G G F V VP G+ V AIKI+++T P + + E IM +
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASM 97
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYC 161
DHP++V+L V T+ LV + G + +Y+ H + + QI + Y
Sbjct: 98 DHPHLVRLLGVC-LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 156
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQG 218
+++++HRDL A N+L+ S ++KI DFG + K + G P + A E
Sbjct: 157 EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 216
Query: 219 KKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+K+ + DVWS GV ++ L++ G P+DG RE+ + + +G+ R+P
Sbjct: 217 RKFTH-QSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE-RLP 262
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
QI + Y +++++HRDL A N+L+ S ++KI DFG +
Sbjct: 148 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 54 IGKGNFAKVKLAKHVPTGKE--VAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLF 111
+G GNF V+ + K+ VAIK++ K +++ RE +IM LD+P IV+L
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVL-KQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 112 QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE---KEARAKFRQIVSAVQYCHQKKIIH 168
V + E L LVME A GG + +LV G+ +E Q+ ++Y +K +H
Sbjct: 77 GVCQAE-ALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 133
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--CGSPP--YAAPELFQGKKYDGP 224
RDL A N+LL + KI+DFG S + T G P + APE +K+
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS- 192
Query: 225 EVDVWSLGVILYTLVS-GSLPF 245
DVWS GV ++ +S G P+
Sbjct: 193 RSDVWSYGVTMWEALSYGQKPY 214
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE---KEARAKFRQIVSAVQYCHQ 530
+++L V + E L LVME A GG + +LV G+ +E Q+ ++Y +
Sbjct: 72 IVRLIGVCQAE-ALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYLEE 128
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFS 559
K +HRDL A N+LL + KI+DFG S
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLS 157
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVK 109
++ IG G F V L + K VAIK I + + S + E +M L HP +V+
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQ 69
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 168
L+ V + + LV E+ G + DYL G + + + Y + +IH
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 129
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELFQGKKYDGPE 225
RDL A N L+ IK++DFG + F ++ + G+ +A+PE+F +Y
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
DVWS GV+++ + S G +P++ + E+ E + G
Sbjct: 189 -DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 223
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKK 532
L++L+ V + + LV E+ G + DYL G + + + Y +
Sbjct: 67 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 126
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELF 583
+IHRDL A N L+ IK++DFG + F ++ + G+ +A+PE+F
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 179
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 17/205 (8%)
Query: 49 KLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K ++ +G+G+F KV+L ++ P TG++VA+K + K + + L +E+ I++ L H
Sbjct: 12 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYH 70
Query: 105 PNIVKLFQVIETEKT---LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR-QIVSAVQY 160
NIVK ++ I TE + L+ME+ G + +YL + + + K+ QI + Y
Sbjct: 71 ENIVK-YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 129
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFC---GSPPY-AAPE-L 215
++ +HRDL A N+L++SE +KI DFG + + T SP + APE L
Sbjct: 130 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVS 240
Q K Y DVWS GV L+ L++
Sbjct: 190 MQSKFYIAS--DVWSFGVTLHELLT 212
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 21/120 (17%)
Query: 461 AKPSRRASSGGETLLKLFQVIETEKTLY--------------------LVMEYASGGEVF 500
A S + SGG + L + IE + LY L+ME+ G +
Sbjct: 42 AVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLK 101
Query: 501 DYLVLHGRMKEKEARAKFR-QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
+YL + + + K+ QI + Y ++ +HRDL A N+L++SE +KI DFG +
Sbjct: 102 EYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 161
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVK 109
++ IG G F V L + K VAIK I + + S + E +M L HP +V+
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQ 66
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 168
L+ V + + LV E+ G + DYL G + + + Y + +IH
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 126
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELFQGKKYDGPE 225
RDL A N L+ IK++DFG + F ++ + G+ +A+PE+F +Y
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
DVWS GV+++ + S G +P++ + E+ E + G
Sbjct: 186 -DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 220
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKK 532
L++L+ V + + LV E+ G + DYL G + + + Y +
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 123
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELF 583
+IHRDL A N L+ IK++DFG + F ++ + G+ +A+PE+F
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 176
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTG-KEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-- 103
+Y+ + IG+G + KV A+ + G + VA+K + G REV +++ L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 104 -HPNIVKLFQVIETEKT-----LYLVMEYASGGEVFDYL--VLHGRMKEKEARAKFRQIV 155
HPN+V+LF V +T L LV E+ ++ YL V + + + Q++
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
+ + H +++HRDLK +N+L+ S IK+ADFG + ++ L + + Y APE+
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y P VD+WS+G I + F GS+
Sbjct: 191 LLQSSYATP-VDLWSVGCIFAEMFRRKPLFRGSS 223
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAA 579
Q++ + + H +++HRDLK +N+L+ S IK+ADFG + ++ L + + Y A
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 580 PELF 583
PE+
Sbjct: 188 PEVL 191
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 96/203 (47%), Gaps = 39/203 (19%)
Query: 105 PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAV 158
P+IV++ V E K L +VME GGE+F + G E+EA + I A+
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 159 QYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
QY H I HRD+K ENLL S+ +K+ DFGF+ E T G K D C
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTGEKYDKSC---------- 179
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF---DGSTLRE-LRERVLRGKYRIP----FY 267
D+WSLGVI+Y L+ G PF G + ++ R+ G+Y P
Sbjct: 180 -----------DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 228
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
+S + + L++ L P +R ++
Sbjct: 229 VSEEVKMLIRNLLKTEPTQRMTI 251
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 54/112 (48%), Gaps = 20/112 (17%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
K L +VME GGE+F + G E+EA + I A+QY H I HRD+K EN
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 147
Query: 543 LLLDSE---MNIKIADFGFSNEFTPGNKLD--------------TFCGSPPY 577
LL S+ +K+ DFGF+ E T G K D CG PP+
Sbjct: 148 LLYTSKRPNAILKLTDFGFAKE-TTGEKYDKSCDMWSLGVIMYILLCGYPPF 198
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVK 109
++ IG G F V L + K VAIK I + + S + E +M L HP +V+
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQ 64
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 168
L+ V + + LV E+ G + DYL G + + + Y + +IH
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 124
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELFQGKKYDGPE 225
RDL A N L+ IK++DFG + F ++ + G+ +A+PE+F +Y
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
DVWS GV+++ + S G +P++ + E+ E + G
Sbjct: 184 -DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 218
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKK 532
L++L+ V + + LV E+ G + DYL G + + + Y +
Sbjct: 62 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELF 583
+IHRDL A N L+ IK++DFG + F ++ + G+ +A+PE+F
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 174
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 54 IGKGNFAKVKLAKHVPTGKE--VAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLF 111
+G GNF V+ + K+ VAIK++ K +++ RE +IM LD+P IV+L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVL-KQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 112 QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE---KEARAKFRQIVSAVQYCHQKKIIH 168
V + E L LVME A GG + +LV G+ +E Q+ ++Y +K +H
Sbjct: 403 GVCQAE-ALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 459
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--CGSPP--YAAPELFQGKKYDGP 224
R+L A N+LL + KI+DFG S + T G P + APE +K+
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS- 518
Query: 225 EVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
DVWS GV ++ +S G P+ E+ + +GK
Sbjct: 519 RSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 556
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE---KEARAKFRQIVSAVQYCHQ 530
+++L V + E L LVME A GG + +LV G+ +E Q+ ++Y +
Sbjct: 398 IVRLIGVCQAE-ALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYLEE 454
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSN 560
K +HR+L A N+LL + KI+DFG S
Sbjct: 455 KNFVHRNLAARNVLLVNRHYAKISDFGLSK 484
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 116/228 (50%), Gaps = 13/228 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEV----AIKIIDKTQLNPGSLQKLFREVRIMKML 102
+ K +K +G G F V VP G+ V AIKI+++T P + + E IM +
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASM 74
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYC 161
DHP++V+L V T+ LV + G + +Y+ H + + QI + Y
Sbjct: 75 DHPHLVRLLGVC-LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 133
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQG 218
+++++HRDL A N+L+ S ++KI DFG + K + G P + A E
Sbjct: 134 EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 193
Query: 219 KKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+K+ + DVWS GV ++ L++ G P+DG RE+ + + +G+ R+P
Sbjct: 194 RKFTH-QSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE-RLP 239
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
QI + Y +++++HRDL A N+L+ S ++KI DFG +
Sbjct: 125 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVK 109
++ IG G F V L + K VAIK I + + S + E +M L HP +V+
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQ 67
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 168
L+ V + + LV E+ G + DYL G + + + Y + +IH
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 127
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELFQGKKYDGPE 225
RDL A N L+ IK++DFG + F ++ + G+ +A+PE+F +Y
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
DVWS GV+++ + S G +P++ + E+ E + G
Sbjct: 187 -DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 221
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKK 532
L++L+ V + + LV E+ G + DYL G + + + Y +
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELF 583
+IHRDL A N L+ IK++DFG + F ++ + G+ +A+PE+F
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 177
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 46/266 (17%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIM 99
K L K +G+G F +V +A+ V K+ VA+K++ K L L E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMM 94
Query: 100 KML-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRM 142
KM+ H NI+ L + LY+++ YAS G + +YL V +M
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 143 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD 202
K+ + Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNID 211
Query: 203 TF----CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRE 255
+ G P + APE + Y + DVWS GV+++ + + G P+ G + EL
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTH-QSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 256 RVLRGKYRIP---------FYMSTDC 272
++L+ +R+ + M DC
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDC 295
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 19/114 (16%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARAK 517
++ L + LY+++ YAS G + +YL V +M K+ +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF 571
Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNIDYY 213
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 116/226 (51%), Gaps = 22/226 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KL++ +G G F +V + + K VA+K + + ++P + E +MK L H +V
Sbjct: 24 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLV 79
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCHQKKI 166
+L+ V+ T++ +Y++ EY G + D+L +K + QI + + ++
Sbjct: 80 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 138
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGK 219
IHRDL+A N+L+ ++ KIADFG + NE T G K + APE
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-----KWTAPEAINYG 193
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
+ + DVWS G++L +V+ G +P+ G T E+ + + RG YR+
Sbjct: 194 TFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM 237
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCH 529
+ L++L+ V+ T++ +Y++ EY G + D+L +K + QI + +
Sbjct: 76 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
++ IHRDL+A N+L+ ++ KIADFG +
Sbjct: 135 ERNYIHRDLRAANILVSDTLSCKIADFGLA 164
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 11/216 (5%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVK 109
++ IG G F V L + K VAIK I + + S E +M L HP +V+
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDK-VAIKTIKEGSM---SEDDFIEEAEVMMKLSHPKLVQ 86
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 168
L+ V + + LV E+ G + DYL G + + + Y + +IH
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 146
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELFQGKKYDGPE 225
RDL A N L+ IK++DFG + F ++ + G+ +A+PE+F +Y
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
DVWS GV+++ + S G +P++ + E+ E + G
Sbjct: 206 -DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 240
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKK 532
L++L+ V + + LV E+ G + DYL G + + + Y +
Sbjct: 84 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 143
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP---PYAAPELF 583
+IHRDL A N L+ IK++DFG + F ++ + G+ +A+PE+F
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 196
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTG-KEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-- 103
+Y+ + IG+G + KV A+ + G + VA+K + G REV +++ L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 104 -HPNIVKLFQVIETEKT-----LYLVMEYASGGEVFDYL--VLHGRMKEKEARAKFRQIV 155
HPN+V+LF V +T L LV E+ ++ YL V + + + Q++
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
+ + H +++HRDLK +N+L+ S IK+ADFG + ++ L + + Y APE+
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y P VD+WS+G I + F GS+
Sbjct: 191 LLQSSYATP-VDLWSVGCIFAEMFRRKPLFRGSS 223
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAA 579
Q++ + + H +++HRDLK +N+L+ S IK+ADFG + ++ L + + Y A
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 580 PELF 583
PE+
Sbjct: 188 PEVL 191
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 117/226 (51%), Gaps = 22/226 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KL++ +G G F +V + + K VA+K + + ++P + E +MK L H +V
Sbjct: 12 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLV 67
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCHQKKI 166
+L+ V+ T++ +Y++ EY G + D+L +K + QI + + ++
Sbjct: 68 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 126
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGK 219
IHR+L+A N+L+ ++ KIADFG + NE+T G K + APE
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-----KWTAPEAINYG 181
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
+ + DVWS G++L +V+ G +P+ G T E+ + + RG YR+
Sbjct: 182 TFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM 225
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCH 529
+ L++L+ V+ T++ +Y++ EY G + D+L +K + QI + +
Sbjct: 64 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 122
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFT 563
++ IHR+L+A N+L+ ++ KIADFG + NE+T
Sbjct: 123 ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYT 161
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 116/226 (51%), Gaps = 22/226 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KL++ +G G F +V + + K VA+K + + ++P + E +MK L H +V
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLV 71
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCHQKKI 166
+L+ V+ T++ +Y++ EY G + D+L +K + QI + + ++
Sbjct: 72 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGK 219
IHRDL+A N+L+ ++ KIADFG + NE T G K + APE
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-----KWTAPEAINYG 185
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
+ + DVWS G++L +V+ G +P+ G T E+ + + RG YR+
Sbjct: 186 TFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM 229
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCH 529
+ L++L+ V+ T++ +Y++ EY G + D+L +K + QI + +
Sbjct: 68 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
++ IHRDL+A N+L+ ++ KIADFG +
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 116/226 (51%), Gaps = 22/226 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KL++ +G G F +V + + K VA+K + + ++P + E +MK L H +V
Sbjct: 22 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLV 77
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCHQKKI 166
+L+ V+ T++ +Y++ EY G + D+L +K + QI + + ++
Sbjct: 78 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGK 219
IHRDL+A N+L+ ++ KIADFG + NE T G K + APE
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-----KWTAPEAINYG 191
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
+ + DVWS G++L +V+ G +P+ G T E+ + + RG YR+
Sbjct: 192 TFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM 235
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCH 529
+ L++L+ V+ T++ +Y++ EY G + D+L +K + QI + +
Sbjct: 74 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
++ IHRDL+A N+L+ ++ KIADFG +
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLA 162
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 9/217 (4%)
Query: 52 KTIGKGNFAKVKLAKH-VPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPNIVK 109
K +G GNF VK + + + I K + N +L+ +L E +M+ LD+P IV+
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ + E E + LVME A G + YL + +K+K Q+ ++Y + +HR
Sbjct: 435 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 493
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFTPGN---KLDTFCGSP-PYAAPELFQGKKYDGPE 225
DL A N+LL ++ KI+DFG S K T P + APE K+ +
Sbjct: 494 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS-K 552
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
DVWS GV+++ S G P+ G E+ + +G+
Sbjct: 553 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 589
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++++ + E E + LVME A G + YL + +K+K Q+ ++Y +
Sbjct: 432 IVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF 490
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+LL ++ KI+DFG S
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLS 516
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 9/217 (4%)
Query: 52 KTIGKGNFAKVKLAKH-VPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPNIVK 109
K +G GNF VK + + + I K + N +L+ +L E +M+ LD+P IV+
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ + E E + LVME A G + YL + +K+K Q+ ++Y + +HR
Sbjct: 436 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 494
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFTPGN---KLDTFCGSP-PYAAPELFQGKKYDGPE 225
DL A N+LL ++ KI+DFG S K T P + APE K+ +
Sbjct: 495 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS-K 553
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
DVWS GV+++ S G P+ G E+ + +G+
Sbjct: 554 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 590
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++++ + E E + LVME A G + YL + +K+K Q+ ++Y +
Sbjct: 433 IVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF 491
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+LL ++ KI+DFG S
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLS 517
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 116/226 (51%), Gaps = 22/226 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KL++ +G G F +V + + K VA+K + + ++P + E +MK L H +V
Sbjct: 18 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLV 73
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCHQKKI 166
+L+ V+ T++ +Y++ EY G + D+L +K + QI + + ++
Sbjct: 74 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 132
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGK 219
IHRDL+A N+L+ ++ KIADFG + NE T G K + APE
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-----KWTAPEAINYG 187
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
+ + DVWS G++L +V+ G +P+ G T E+ + + RG YR+
Sbjct: 188 TFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM 231
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCH 529
+ L++L+ V+ T++ +Y++ EY G + D+L +K + QI + +
Sbjct: 70 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
++ IHRDL+A N+L+ ++ KIADFG +
Sbjct: 129 ERNYIHRDLRAANILVSDTLSCKIADFGLA 158
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 116/226 (51%), Gaps = 22/226 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KL++ +G G F +V + + K VA+K + + ++P + E +MK L H +V
Sbjct: 25 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLV 80
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCHQKKI 166
+L+ V+ T++ +Y++ EY G + D+L +K + QI + + ++
Sbjct: 81 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 139
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGK 219
IHRDL+A N+L+ ++ KIADFG + NE T G K + APE
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-----KWTAPEAINYG 194
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
+ + DVWS G++L +V+ G +P+ G T E+ + + RG YR+
Sbjct: 195 TFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM 238
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCH 529
+ L++L+ V+ T++ +Y++ EY G + D+L +K + QI + +
Sbjct: 77 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
++ IHRDL+A N+L+ ++ KIADFG +
Sbjct: 136 ERNYIHRDLRAANILVSDTLSCKIADFGLA 165
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTG-KEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-- 103
+Y+ + IG+G + KV A+ + G + VA+K + G REV +++ L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 104 -HPNIVKLFQVIETEKT-----LYLVMEYASGGEVFDYL--VLHGRMKEKEARAKFRQIV 155
HPN+V+LF V +T L LV E+ ++ YL V + + + Q++
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
+ + H +++HRDLK +N+L+ S IK+ADFG + ++ L + + Y APE+
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
Y P VD+WS+G I + F GS+
Sbjct: 191 LLQSSYATP-VDLWSVGCIFAEMFRRKPLFRGSS 223
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAA 579
Q++ + + H +++HRDLK +N+L+ S IK+ADFG + ++ L + + Y A
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 580 PELF 583
PE+
Sbjct: 188 PEVL 191
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 46/266 (17%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIM 99
K L K +G+G F +V +A+ V K+ VA+K++ K L L E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMM 94
Query: 100 KML-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRM 142
KM+ H NI+ L + LY+++ YAS G + +YL V +M
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 143 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD 202
K+ + Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNID 211
Query: 203 TF----CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRE 255
+ G P + APE + Y + DVWS GV+++ + + G P+ G + EL
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTH-QSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 256 RVLRGKYRIP---------FYMSTDC 272
++L+ +R+ + M DC
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDC 295
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 19/114 (16%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARAK 517
++ L + LY+++ YAS G + +YL V +M K+ +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF 571
Q+ ++Y +K IHRDL A N+L+ +KIADFG + + N +D +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI---NNIDYY 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 116/226 (51%), Gaps = 22/226 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KL++ +G G F +V + + K VA+K + + ++P + E +MK L H +V
Sbjct: 17 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLV 72
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCHQKKI 166
+L+ V+ T++ +Y++ EY G + D+L +K + QI + + ++
Sbjct: 73 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 131
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGK 219
IHRDL+A N+L+ ++ KIADFG + NE T G K + APE
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-----KWTAPEAINYG 186
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
+ + DVWS G++L +V+ G +P+ G T E+ + + RG YR+
Sbjct: 187 TFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM 230
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCH 529
+ L++L+ V+ T++ +Y++ EY G + D+L +K + QI + +
Sbjct: 69 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
++ IHRDL+A N+L+ ++ KIADFG +
Sbjct: 128 ERNYIHRDLRAANILVSDTLSCKIADFGLA 157
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 10/214 (4%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 110
L+ +G G + V A ++VA+K + + + ++ +RE+R++K L H N++ L
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 111 FQV------IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
V IE +YLV G + +V + ++ + Q++ ++Y H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
IIHRDLK N+ ++ + ++I DFG + + ++ + + Y APE+ +
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVL 258
VD+WS+G I+ L+ G F GS + +R++
Sbjct: 209 TVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM 242
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAA 579
Q++ ++Y H IIHRDLK N+ ++ + ++I DFG + + ++ + + Y A
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQ--ADEEMTGYVATRWYRA 196
Query: 580 PELF 583
PE+
Sbjct: 197 PEIM 200
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 10/214 (4%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 110
L+ +G G + V A ++VA+K + + + ++ +RE+R++K L H N++ L
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 111 FQV------IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
V IE +YLV G + +V + ++ + Q++ ++Y H
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA 142
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
IIHRDLK N+ ++ + ++I DFG + + ++ + + Y APE+ +
Sbjct: 143 GIIHRDLKPSNVAVNEDCELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLNWMHYNQ 200
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVL 258
VD+WS+G I+ L+ G F GS + +R++
Sbjct: 201 TVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM 234
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAA 579
Q++ ++Y H IIHRDLK N+ ++ + ++I DFG + + ++ + + Y A
Sbjct: 131 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQ--ADEEMTGYVATRWYRA 188
Query: 580 PELF 583
PE+
Sbjct: 189 PEIM 192
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 116/226 (51%), Gaps = 22/226 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KL++ +G G F +V + + K VA+K + + ++P + E +MK L H +V
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLV 71
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCHQKKI 166
+L+ V+ T++ +Y++ EY G + D+L +K + QI + + ++
Sbjct: 72 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPYAAPELFQGK 219
IHRDL+A N+L+ ++ KIADFG + NE T G K + APE
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-----KWTAPEAINYG 185
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
+ + DVWS G++L +V+ G +P+ G T E+ + + RG YR+
Sbjct: 186 TFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM 229
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCH 529
+ L++L+ V+ T++ +Y++ EY G + D+L +K + QI + +
Sbjct: 68 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
++ IHRDL+A N+L+ ++ KIADFG +
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 10/214 (4%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 110
L+ +G G + V A ++VA+K + + + ++ +RE+R++K L H N++ L
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 111 FQV------IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
V IE +YLV G + +V + ++ + Q++ ++Y H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
IIHRDLK N+ ++ + ++I DFG + + ++ + + Y APE+ +
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 225 EVDVWSLGVILYTLVSGSLPFDGSTLRELRERVL 258
VD+WS+G I+ L+ G F GS + +R++
Sbjct: 209 TVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM 242
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAA 579
Q++ ++Y H IIHRDLK N+ ++ + ++I DFG + + ++ + + Y A
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQ--ADEEMTGYVATRWYRA 196
Query: 580 PELF 583
PE+
Sbjct: 197 PEIM 200
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 105/214 (49%), Gaps = 16/214 (7%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y++++TIG G + V A+ TG++VAIK I + ++ RE++I+K H N
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 115
Query: 107 IVKLFQVIETE------KTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAV 158
I+ + ++ K++Y+V++ + ++H + + R Q++ +
Sbjct: 116 IIAIKDILRPTVPYGEFKSVYVVLDLMESDL---HQIIHSSQPLTLEHVRYFLYQLLRGL 172
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF--TPGNK---LDTFCGSPPYAAP 213
+Y H ++IHRDLK NLL++ +KI DFG + +P + + + Y AP
Sbjct: 173 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 232
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
EL +D+WS+G I +++ F G
Sbjct: 233 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 266
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 512 KEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF--TPGNK-- 567
+ R Q++ ++Y H ++IHRDLK NLL++ +KI DFG + +P
Sbjct: 159 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 568 -LDTFCGSPPYAAPELF 583
+ + + Y APEL
Sbjct: 219 FMTEYVATRWYRAPELM 235
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 105/214 (49%), Gaps = 16/214 (7%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y++++TIG G + V A+ TG++VAIK I + ++ RE++I+K H N
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 114
Query: 107 IVKLFQVIETE------KTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAV 158
I+ + ++ K++Y+V++ + ++H + + R Q++ +
Sbjct: 115 IIAIKDILRPTVPYGEFKSVYVVLDLMESDL---HQIIHSSQPLTLEHVRYFLYQLLRGL 171
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF--TPGNK---LDTFCGSPPYAAP 213
+Y H ++IHRDLK NLL++ +KI DFG + +P + + + Y AP
Sbjct: 172 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 231
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
EL +D+WS+G I +++ F G
Sbjct: 232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 512 KEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF--TPGNK-- 567
+ R Q++ ++Y H ++IHRDLK NLL++ +KI DFG + +P
Sbjct: 158 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 568 -LDTFCGSPPYAAPELF 583
+ + + Y APEL
Sbjct: 218 FMTEYVATRWYRAPELM 234
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 18/252 (7%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHV--PTGKE--VAIKIIDKTQLNPGSLQKLFREVR 97
E I K+ + IG G F +V + H+ P +E VAIK + K+ + E
Sbjct: 29 EIDISCVKIEQVIGAGEFGEV-CSGHLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEAS 86
Query: 98 IMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVS 156
IM DHPN++ L V+ + ++ E+ G + +L + G+ + R I +
Sbjct: 87 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAA 146
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFC----GSPP--Y 210
++Y +HRDL A N+L++S + K++DFG S T+ G P +
Sbjct: 147 GMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW 206
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMS 269
APE Q +K+ DVWS G++++ ++S G P+ T +++ + YR+P M
Sbjct: 207 TAPEAIQYRKFTSAS-DVWSYGIVMWEVMSYGERPYWDMTNQDVINAI-EQDYRLPPPM- 263
Query: 270 TDCENLLKKFLV 281
DC + L + ++
Sbjct: 264 -DCPSALHQLML 274
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
++ L V+ + ++ E+ G + +L + G+ + R I + ++Y
Sbjct: 96 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 155
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+L++S + K++DFG S
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLS 182
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 107/255 (41%), Gaps = 48/255 (18%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY L KT+G G+F V + +GK A+K K +P RE+ IMK+LDH N
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALK---KVLQDPRYKN---RELDIMKVLDHVN 61
Query: 107 IVKLFQVIET--------------------------------------EKTLYLVMEYAS 128
I+KL T K L ++MEY
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 129 G--GEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN-I 184
+V + GR + Q+ AV + H I HRD+K +NLL++S+ N +
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTL 181
Query: 185 KIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 244
K+ DFG + + P S Y APEL G P +D+WS+G + L+ G
Sbjct: 182 KLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPL 241
Query: 245 FDGSTLRELRERVLR 259
F G T + R+++
Sbjct: 242 FSGETSIDQLVRIIQ 256
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Query: 485 KTLYLVMEYASG--GEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAE 541
K L ++MEY +V + GR + Q+ AV + H I HRD+K +
Sbjct: 111 KYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQ 170
Query: 542 NLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSS 592
NLL++S+ N +K+ DFG + + P S Y APEL G T S
Sbjct: 171 NLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPS 222
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 11/222 (4%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRI-MKMLDHPNIVKLFQ 112
+G+G + V+ +HVP+G+ +A+K I T +N ++L ++ I M+ +D P V +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRAT-VNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 113 VIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFR-QIVSAVQYCHQK-KIIH 168
+ E +++ ME S + + ++ G+ ++ K IV A+++ H K +IH
Sbjct: 74 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 133
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ---GKKYDGPE 225
RD+K N+L+++ +K+ DFG S D G PY APE +K +
Sbjct: 134 RDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVK 193
Query: 226 VDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIP 265
D+WSLG+ + L P+D G+ ++L++ V ++P
Sbjct: 194 SDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP 235
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 521 IVSAVQYCHQK-KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAA 579
IV A+++ H K +IHRD+K N+L+++ +K+ DFG S D G PY A
Sbjct: 118 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMA 177
Query: 580 PE 581
PE
Sbjct: 178 PE 179
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 96/212 (45%), Gaps = 29/212 (13%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
+K ++ IG G F +V AKH GK IK + + N +K REV+ + LDH NI
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIK---RVKYNN---EKAEREVKALAKLDHVNI 66
Query: 108 VKLFQVIE----------------TEKTLYLVMEYASGGEVFDYLVLHGRMKEKE----A 147
V + K L++ ME+ G + ++ R EK A
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLA 124
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGS 207
F QI V Y H KK+I+RDLK N+ L +KI DFG K G+
Sbjct: 125 LELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGT 184
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 239
Y +PE + Y G EVD+++LG+IL L+
Sbjct: 185 LRYMSPEQISSQDY-GKEVDLYALGLILAELL 215
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHGRMKEKE----ARAKFRQIVSAVQYCHQKKIIHRDLKA 540
K L++ ME+ G + ++ R EK A F QI V Y H KK+I+RDLK
Sbjct: 93 KCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKP 150
Query: 541 ENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
N+ L +KI DFG K G+ Y +PE
Sbjct: 151 SNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPE 191
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 36/220 (16%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 110
+ +G+G F +V A++ + AIK I T+ L + EV ++ L+H +V+
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE---EKLSTILSEVXLLASLNHQYVVRY 67
Query: 111 FQV-------------IETEKTLYLVMEYASGGEVFDYLVLHGR---MKEKEARAKFRQI 154
+ ++ + TL++ EY ++D ++H + E FRQI
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYD--LIHSENLNQQRDEYWRLFRQI 125
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-------------NEFTPG--N 199
+ A+ Y H + IIHR+LK N+ +D N+KI DFG + ++ PG +
Sbjct: 126 LEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 239
L + G+ Y A E+ G + ++D +SLG+I + +
Sbjct: 186 NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGR---MKEKEARAKFRQIVSAVQYCHQKKIIHRD 537
++ + TL++ EY ++D ++H + E FRQI+ A+ Y H + IIHR+
Sbjct: 84 VKKKSTLFIQXEYCENRTLYD--LIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRN 141
Query: 538 LKAENLLLDSEMNIKIADFGFS-------------NEFTPG--NKLDTFCGSPPYAAPEL 582
LK N+ +D N+KI DFG + ++ PG + L + G+ Y A E+
Sbjct: 142 LKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEV 201
Query: 583 FQG 585
G
Sbjct: 202 LDG 204
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 125/294 (42%), Gaps = 59/294 (20%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++L +G+G + V A H PTG+ VAIK I+ P + RE++I+K H NI
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENI 71
Query: 108 VKLFQV-----IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYC 161
+ +F + E +Y++ E + V+ +M + F Q + AV+
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDL---HRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDT--------FCGSPPY 210
H +IHRDLK NLL++S ++K+ DFG + +E N T F + Y
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVL------------ 258
APE+ +DVWS G IL L F G R+ R ++L
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG---RDYRHQLLLIFGIIGTPHSD 245
Query: 259 ---------RGKYRI---PFYMSTDCE-----------NLLKKFLVLNPAKRAS 289
R + I P Y + E +LL++ LV +PAKR +
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
Q + AV+ H +IHRDLK NLL++S ++K+ DFG +
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 9/217 (4%)
Query: 52 KTIGKGNFAKVKLAKH-VPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPNIVK 109
K +G GNF VK + + + I K + N +L+ +L E +M+ LD+P IV+
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ + E E + LVME A G + YL + +K+K Q+ ++Y + +HR
Sbjct: 91 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 149
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFTPGN---KLDTFCGSP-PYAAPELFQGKKYDGPE 225
DL A N+LL ++ KI+DFG S K T P + APE K+ +
Sbjct: 150 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS-K 208
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
DVWS GV+++ S G P+ G E+ + +G+
Sbjct: 209 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 245
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++++ + E E + LVME A G + YL + +K+K Q+ ++Y +
Sbjct: 88 IVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF 146
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+LL ++ KI+DFG S
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLS 172
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 52 KTIGKGNFAKVKLAKH-VPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPNIVK 109
K +G GNF VK + + + I K + N +L+ +L E +M+ LD+P IV+
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ + E E + LVME A G + YL + +K+K Q+ ++Y + +HR
Sbjct: 77 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 135
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFTPGN---KLDTFCGSP-PYAAPELFQGKKYDGPE 225
DL A N+LL ++ KI+DFG S K T P + APE K+
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKS 195
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
DVWS GV+++ S G P+ G E+ + +G+
Sbjct: 196 -DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 231
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++++ + E E + LVME A G + YL + +K+K Q+ ++Y +
Sbjct: 74 IVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF 132
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+LL ++ KI+DFG S
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLS 158
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 119/252 (47%), Gaps = 18/252 (7%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKE---VAIKIIDKTQLNPGSLQKLFREVRI 98
E + K+ + IG G F +V + GK+ VAIK + K ++ E I
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASI 70
Query: 99 MKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSA 157
M +HPNI++L V+ + ++ E+ G + +L L+ G+ + R I S
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 130
Query: 158 VQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD-----TFCGSPP--Y 210
++Y + +HRDL A N+L++S + K++DFG S F N D + G P +
Sbjct: 131 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSR-FLEENSSDPTETSSLGGKIPIRW 189
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMS 269
APE +K+ D WS G++++ ++S G P+ + +++ + YR+P
Sbjct: 190 TAPEAIAFRKFTSAS-DAWSYGIVMWEVMSFGERPYWDMSNQDVIN-AIEQDYRLP--PP 245
Query: 270 TDCENLLKKFLV 281
DC L + ++
Sbjct: 246 PDCPTSLHQLML 257
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ + ++ E+ G + +L L+ G+ + R I S ++Y +
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS 138
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+L++S + K++DFG S
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLS 165
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 52 KTIGKGNFAKVKLAKH-VPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPNIVK 109
K +G GNF VK + + + I K + N +L+ +L E +M+ LD+P IV+
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ + E E + LVME A G + YL + +K+K Q+ ++Y + +HR
Sbjct: 77 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 135
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFTPGN---KLDTFCGSP-PYAAPELFQGKKYDGPE 225
DL A N+LL ++ KI+DFG S K T P + APE K+
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 195
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
DVWS GV+++ S G P+ G E+ + +G+
Sbjct: 196 -DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 231
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++++ + E E + LVME A G + YL + +K+K Q+ ++Y +
Sbjct: 74 IVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF 132
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+LL ++ KI+DFG S
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLS 158
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 9/217 (4%)
Query: 52 KTIGKGNFAKVKLAKH-VPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPNIVK 109
K +G GNF VK + + + I K + N +L+ +L E +M+ LD+P IV+
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ + E E + LVME A G + YL + +K+K Q+ ++Y + +HR
Sbjct: 93 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 151
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFTPGN---KLDTFCGSP-PYAAPELFQGKKYDGPE 225
DL A N+LL ++ KI+DFG S K T P + APE K+ +
Sbjct: 152 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS-K 210
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
DVWS GV+++ S G P+ G E+ + +G+
Sbjct: 211 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 247
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++++ + E E + LVME A G + YL + +K+K Q+ ++Y +
Sbjct: 90 IVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF 148
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+LL ++ KI+DFG S
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 9/217 (4%)
Query: 52 KTIGKGNFAKVKLAKH-VPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPNIVK 109
K +G GNF VK + + + I K + N +L+ +L E +M+ LD+P IV+
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ + E E + LVME A G + YL + +K+K Q+ ++Y + +HR
Sbjct: 93 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 151
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFTPGN---KLDTFCGSP-PYAAPELFQGKKYDGPE 225
DL A N+LL ++ KI+DFG S K T P + APE K+ +
Sbjct: 152 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS-K 210
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
DVWS GV+++ S G P+ G E+ + +G+
Sbjct: 211 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 247
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++++ + E E + LVME A G + YL + +K+K Q+ ++Y +
Sbjct: 90 IVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF 148
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+LL ++ KI+DFG S
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 52 KTIGKGNFAKVKLAKH-VPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPNIVK 109
K +G GNF VK + + + I K + N +L+ +L E +M+ LD+P IV+
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ + E E + LVME A G + YL + +K+K Q+ ++Y + +HR
Sbjct: 71 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 129
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFTPGN---KLDTFCGSP-PYAAPELFQGKKYDGPE 225
DL A N+LL ++ KI+DFG S K T P + APE K+
Sbjct: 130 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 189
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
DVWS GV+++ S G P+ G E+ + +G+
Sbjct: 190 -DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 225
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++++ + E E + LVME A G + YL + +K+K Q+ ++Y +
Sbjct: 68 IVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF 126
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+LL ++ KI+DFG S
Sbjct: 127 VHRDLAARNVLLVTQHYAKISDFGLS 152
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRI-MKMLDHPNIVKLFQ 112
+G+G + V+ +HVP+G+ +A+K I T +N ++L ++ I M+ +D P V +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRAT-VNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 113 VIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFR-QIVSAVQYCHQK-KIIH 168
+ E +++ ME S + + ++ G+ ++ K IV A+++ H K +IH
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 177
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ---GKKYDGPE 225
RD+K N+L+++ +K+ DFG S G PY APE +K +
Sbjct: 178 RDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVK 237
Query: 226 VDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIP 265
D+WSLG+ + L P+D G+ ++L++ V ++P
Sbjct: 238 SDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP 279
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 521 IVSAVQYCHQK-KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAA 579
IV A+++ H K +IHRD+K N+L+++ +K+ DFG S G PY A
Sbjct: 162 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMA 221
Query: 580 PE 581
PE
Sbjct: 222 PE 223
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
IG+G+F V T EVA + +L Q+ E +K L HPNIV+ +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 114 IET----EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK--II 167
E+ +K + LV E + G + YL K K R+ RQI+ +Q+ H + II
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPII 153
Query: 168 HRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
HRDLK +N+ + ++KI D G + + G+P + APE ++ +KYD V
Sbjct: 154 HRDLKCDNIFITGPTGSVKIGDLGLAT-LKRASFAKAVIGTPEFXAPEXYE-EKYD-ESV 210
Query: 227 DVWSLGVILYTLVSGSLPF 245
DV++ G + P+
Sbjct: 211 DVYAFGXCXLEXATSEYPY 229
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK--IIHRDL 538
++ +K + LV E + G + YL K K R+ RQI+ +Q+ H + IIHRDL
Sbjct: 98 VKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDL 157
Query: 539 KAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
K +N+ + ++KI D G + + G+P + APE ++
Sbjct: 158 KCDNIFITGPTGSVKIGDLGLAT-LKRASFAKAVIGTPEFXAPEXYE 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 52 KTIGKGNFAKVKLAKH-VPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPNIVK 109
K +G GNF VK + + + I K + N +L+ +L E +M+ LD+P IV+
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ + E E + LVME A G + YL + +K+K Q+ ++Y + +HR
Sbjct: 73 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 131
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFTPGN---KLDTFCGSP-PYAAPELFQGKKYDGPE 225
DL A N+LL ++ KI+DFG S K T P + APE K+
Sbjct: 132 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 191
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
DVWS GV+++ S G P+ G E+ + +G+
Sbjct: 192 -DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 227
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++++ + E E + LVME A G + YL + +K+K Q+ ++Y +
Sbjct: 70 IVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF 128
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+LL ++ KI+DFG S
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLS 154
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 125/294 (42%), Gaps = 59/294 (20%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++L +G+G + V A H PTG+ VAIK I+ P + RE++I+K H NI
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENI 71
Query: 108 VKLFQV-----IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYC 161
+ +F + E +Y++ E + V+ +M + F Q + AV+
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDL---HRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNK--------LDTFCGSPPY 210
H +IHRDLK NLL++S ++K+ DFG + +E N + + + Y
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWY 188
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVL------------ 258
APE+ +DVWS G IL L F G R+ R ++L
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG---RDYRHQLLLIFGIIGTPHSD 245
Query: 259 ---------RGKYRI---PFYMSTDCE-----------NLLKKFLVLNPAKRAS 289
R + I P Y + E +LL++ LV +PAKR +
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
Q + AV+ H +IHRDLK NLL++S ++K+ DFG +
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 52 KTIGKGNFAKVKLAKH-VPTGKEVAIKIIDKTQLNPGSLQ-KLFREVRIMKMLDHPNIVK 109
K +G GNF VK + + + I K + N +L+ +L E +M+ LD+P IV+
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ + E E + LVME A G + YL + +K+K Q+ ++Y + +HR
Sbjct: 83 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 141
Query: 170 DLKAENLLLDSEMNIKIADFGFSNEFTPGN---KLDTFCGSP-PYAAPELFQGKKYDGPE 225
DL A N+LL ++ KI+DFG S K T P + APE K+
Sbjct: 142 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 201
Query: 226 VDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
DVWS GV+++ S G P+ G E+ + +G+
Sbjct: 202 -DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 237
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++++ + E E + LVME A G + YL + +K+K Q+ ++Y +
Sbjct: 80 IVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF 138
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+LL ++ KI+DFG S
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLS 164
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 119/252 (47%), Gaps = 18/252 (7%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKE---VAIKIIDKTQLNPGSLQKLFREVRI 98
E + K+ + IG G F +V + GK+ VAIK + K ++ E I
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASI 68
Query: 99 MKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSA 157
M +HPNI++L V+ + ++ E+ G + +L L+ G+ + R I S
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 128
Query: 158 VQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD-----TFCGSPP--Y 210
++Y + +HRDL A N+L++S + K++DFG S F N D + G P +
Sbjct: 129 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSR-FLEENSSDPTYTSSLGGKIPIRW 187
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMS 269
APE +K+ D WS G++++ ++S G P+ + +++ + YR+P
Sbjct: 188 TAPEAIAFRKFTSAS-DAWSYGIVMWEVMSFGERPYWDMSNQDVIN-AIEQDYRLP--PP 243
Query: 270 TDCENLLKKFLV 281
DC L + ++
Sbjct: 244 PDCPTSLHQLML 255
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ + ++ E+ G + +L L+ G+ + R I S ++Y +
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS 136
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+L++S + K++DFG S
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLS 163
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 102
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 161
I+ + +I E K +YLV + G +++ L+ + QI+ ++Y
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLV-THLMGADLYK-LLKTQHLSNDHICYFLYQILRGLKYI 160
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELFQ 217
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 161 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
IE K +YLV + G +++ L+ + QI+ ++Y H ++HRDLK
Sbjct: 115 IEQMKDVYLV-THLMGADLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 172
Query: 541 ENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELFQGGAPVTSS 592
NLLL++ ++KI DFG + P + L + + Y APE+ T S
Sbjct: 173 SNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 228
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 12/221 (5%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KL++ +G G +V + + K VA+K + + ++P + E +MK L H +V
Sbjct: 16 KLVERLGAGQAGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLV 71
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCHQKKI 166
+L+ V+ T++ +Y++ EY G + D+L +K + QI + + ++
Sbjct: 72 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKYDGP 224
IHRDL+A N+L+ ++ KIADFG + P + APE +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFT-I 189
Query: 225 EVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
+ DVWS G++L +V+ G +P+ G T E+ + + RG YR+
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM 229
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKFRQIVSAVQYCH 529
+ L++L+ V+ T++ +Y++ EY G + D+L +K + QI + +
Sbjct: 68 QRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
++ IHRDL+A N+L+ ++ KIADFG +
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD--- 103
+Y+ + IG G + V A+ +G VA+K + G REV +++ L+
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 104 HPNIVKLFQVIETEKT-----LYLVMEYASGGEVFDYL--VLHGRMKEKEARAKFRQIVS 156
HPN+V+L V T +T + LV E+ ++ YL + + + RQ +
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+ + H I+HRDLK EN+L+ S +K+ADFG + ++ LD + Y APE+
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVL 183
Query: 217 QGKKYDGPEVDVWSLGVIL 235
Y P VD+WS+G I
Sbjct: 184 LQSTYATP-VDMWSVGCIF 201
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPY 577
RQ + + + H I+HRDLK EN+L+ S +K+ADFG + ++ LD + Y
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWY 177
Query: 578 AAPELF 583
APE+
Sbjct: 178 RAPEVL 183
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 119/252 (47%), Gaps = 18/252 (7%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHV--PTGKE--VAIKIIDKTQLNPGSLQKLFREVR 97
E I K+ + IG G F +V + H+ P +E VAIK + K+ + E
Sbjct: 3 EIDISCVKIEQVIGAGEFGEV-CSGHLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEAS 60
Query: 98 IMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVS 156
IM DHPN++ L V+ + ++ E+ G + +L + G+ + R I +
Sbjct: 61 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAA 120
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFC----GSPP--Y 210
++Y +HR L A N+L++S + K++DFG S T+ G P +
Sbjct: 121 GMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW 180
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMS 269
APE Q +K+ DVWS G++++ ++S G P+ T +++ + YR+P M
Sbjct: 181 TAPEAIQYRKFTSAS-DVWSYGIVMWEVMSYGERPYWDMTNQDVINAI-EQDYRLPPPM- 237
Query: 270 TDCENLLKKFLV 281
DC + L + ++
Sbjct: 238 -DCPSALHQLML 248
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
++ L V+ + ++ E+ G + +L + G+ + R I + ++Y
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 129
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HR L A N+L++S + K++DFG S
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLS 156
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
+E H ++L +G+G+F +V + TG + A+K K +L ++FR +M
Sbjct: 90 EEVHWATHQL--RLGRGSFGEVHRMEDKQTGFQCAVK---KVRL------EVFRAEELMA 138
Query: 101 M--LDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 158
L P IV L+ + + + ME GG + + G + E A Q + +
Sbjct: 139 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGL 198
Query: 159 QYCHQKKIIHRDLKAENLLLDSE-MNIKIADFGFSNEFTP---GNKL---DTFCGSPPYA 211
+Y H ++I+H D+KA+N+LL S+ + + DFG + P G L D G+ +
Sbjct: 199 EYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHM 258
Query: 212 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 245
APE+ G+ D +VDVWS ++ +++G P+
Sbjct: 259 APEVVLGRSCDA-KVDVWSSCCMMLHMLNGCHPW 291
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L+ + + + ME GG + + G + E A Q + ++Y H ++I
Sbjct: 147 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRI 206
Query: 534 IHRDLKAENLLLDSE-MNIKIADFGFSNEFTP---GNKL---DTFCGSPPYAAPELFQG 585
+H D+KA+N+LL S+ + + DFG + P G L D G+ + APE+ G
Sbjct: 207 LHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 124/294 (42%), Gaps = 59/294 (20%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++L +G+G + V A H PTG+ VAIK I+ P + RE++I+K H NI
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENI 71
Query: 108 VKLFQV-----IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYC 161
+ +F + E +Y++ E + V+ +M + F Q + AV+
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDL---HRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNK--------LDTFCGSPPY 210
H +IHRDLK NLL++S ++K+ DFG + +E N + + Y
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWY 188
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVL------------ 258
APE+ +DVWS G IL L F G R+ R ++L
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG---RDYRHQLLLIFGIIGTPHSD 245
Query: 259 ---------RGKYRI---PFYMSTDCE-----------NLLKKFLVLNPAKRAS 289
R + I P Y + E +LL++ LV +PAKR +
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
Q + AV+ H +IHRDLK NLL++S ++K+ DFG +
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 96/225 (42%), Gaps = 42/225 (18%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
+K ++ IG G F +V AKH GK I+ + + N +K REV+ + LDH NI
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIR---RVKYNN---EKAEREVKALAKLDHVNI 67
Query: 108 VKLFQVIE-----------------------------TEKTLYLVMEYASGGEVFDYLVL 138
V + K L++ ME+ G + ++
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-- 125
Query: 139 HGRMKEKE----ARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 194
R EK A F QI V Y H KK+IHRDLK N+ L +KI DFG
Sbjct: 126 EKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 195 FTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 239
K G+ Y +PE + Y G EVD+++LG+IL L+
Sbjct: 186 LKNDGKRTRSKGTLRYMSPEQISSQDY-GKEVDLYALGLILAELL 229
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHGRMKEKE----ARAKFRQIVSAVQYCHQKKIIHRDLKA 540
K L++ ME+ G + ++ R EK A F QI V Y H KK+IHRDLK
Sbjct: 107 KCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKP 164
Query: 541 ENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
N+ L +KI DFG K G+ Y +PE
Sbjct: 165 SNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPE 205
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNIVKL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ YCH
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 163
Query: 163 QKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
+ I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL +
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 223
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG + ++ PF
Sbjct: 224 YDYSLDMWSLGCMFAGMIFRKEPF 247
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++KL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ Y
Sbjct: 105 GGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDY 161
Query: 528 CHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH + I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL
Sbjct: 162 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 218
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
+E H ++L +G+G+F +V + TG + A+K K +L ++FR +M
Sbjct: 71 EEVHWATHQL--RLGRGSFGEVHRMEDKQTGFQCAVK---KVRL------EVFRAEELMA 119
Query: 101 M--LDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 158
L P IV L+ + + + ME GG + + G + E A Q + +
Sbjct: 120 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGL 179
Query: 159 QYCHQKKIIHRDLKAENLLLDSE-MNIKIADFGFSNEFTP---GNKL---DTFCGSPPYA 211
+Y H ++I+H D+KA+N+LL S+ + + DFG + P G L D G+ +
Sbjct: 180 EYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHM 239
Query: 212 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 245
APE+ G+ D +VDVWS ++ +++G P+
Sbjct: 240 APEVVLGRSCDA-KVDVWSSCCMMLHMLNGCHPW 272
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L+ + + + ME GG + + G + E A Q + ++Y H ++I
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRI 187
Query: 534 IHRDLKAENLLLDSE-MNIKIADFGFSNEFTP---GNKL---DTFCGSPPYAAPELFQG 585
+H D+KA+N+LL S+ + + DFG + P G L D G+ + APE+ G
Sbjct: 188 LHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNIVKL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 163 QKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
+ I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG + ++ PF
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPF 226
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++KL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ Y
Sbjct: 84 GGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDY 140
Query: 528 CHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH + I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 197
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 102
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 159
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 160 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 576 PYAAPELFQGGAPVTSS 592
Y APE+ T S
Sbjct: 212 WYRAPEIMLNSKGYTKS 228
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLAFRHEN 84
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 141
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 576 PYAAPELFQGGAPVTSS 592
Y APE+ T S
Sbjct: 194 WYRAPEIMLNSKGYTKS 210
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNIVKL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ YCH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 143
Query: 163 QKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
+ I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG + ++ PF
Sbjct: 204 YDYSLDMWSLGCMFAGMIFRKEPF 227
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++KL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ Y
Sbjct: 85 GGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDY 141
Query: 528 CHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH + I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL
Sbjct: 142 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 198
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNIVKL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ YCH
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 144
Query: 163 QKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
+ I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL +
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 204
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG + ++ PF
Sbjct: 205 YDYSLDMWSLGCMFAGMIFRKEPF 228
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Query: 469 SGGETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 526
GG ++KL ++ + KT L+ EY + D+ VL+ + + + R +++ A+
Sbjct: 85 CGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALD 141
Query: 527 YCHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
YCH + I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL
Sbjct: 142 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 199
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 119/268 (44%), Gaps = 33/268 (12%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTG--KEVAIKIIDKTQLNPGSLQKLFREVRIM-KMLDHP 105
K IG+GNF +V A+ G + AIK + K + + E+ ++ K+ HP
Sbjct: 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLGHHP 86
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL----VLH------------GRMKEKEARA 149
NI+ L E LYL +EYA G + D+L VL + ++
Sbjct: 87 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 150 KFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS--NEFTPGNKLDTFCGS 207
+ + Y QK+ IHRDL A N+L+ KIADFG S E + G
Sbjct: 147 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM----GR 202
Query: 208 PP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
P + A E Y DVWS GV+L+ +VS G P+ G T EL E++ +G YR+
Sbjct: 203 LPVRWMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YRL 260
Query: 265 --PFYMSTDCENLLKKFLVLNPAKRASL 290
P + +L+++ P +R S
Sbjct: 261 EKPLNCDDEVYDLMRQCWREKPYERPSF 288
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 16/102 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----VLH------------GRMKEKEARAK 517
++ L E LYL +EYA G + D+L VL + ++
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
+ + Y QK+ IHRDL A N+L+ KIADFG S
Sbjct: 148 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 189
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNIVKL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ YCH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 143
Query: 163 QKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
+ I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG + ++ PF
Sbjct: 204 YDYSLDMWSLGCMFAGMIFRKEPF 227
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Query: 469 SGGETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 526
GG ++KL ++ + KT L+ EY + D+ VL+ + + + R +++ A+
Sbjct: 84 CGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALD 140
Query: 527 YCHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
YCH + I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL
Sbjct: 141 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 198
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 119/268 (44%), Gaps = 33/268 (12%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTG--KEVAIKIIDKTQLNPGSLQKLFREVRIM-KMLDHP 105
K IG+GNF +V A+ G + AIK + K + + E+ ++ K+ HP
Sbjct: 18 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLGHHP 76
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL----VLH------------GRMKEKEARA 149
NI+ L E LYL +EYA G + D+L VL + ++
Sbjct: 77 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 150 KFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS--NEFTPGNKLDTFCGS 207
+ + Y QK+ IHRDL A N+L+ KIADFG S E + G
Sbjct: 137 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM----GR 192
Query: 208 PP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
P + A E Y DVWS GV+L+ +VS G P+ G T EL E++ +G YR+
Sbjct: 193 LPVRWMAIESLNYSVY-TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YRL 250
Query: 265 --PFYMSTDCENLLKKFLVLNPAKRASL 290
P + +L+++ P +R S
Sbjct: 251 EKPLNCDDEVYDLMRQCWREKPYERPSF 278
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 16/102 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----VLH------------GRMKEKEARAK 517
++ L E LYL +EYA G + D+L VL + ++
Sbjct: 78 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
+ + Y QK+ IHRDL A N+L+ KIADFG S
Sbjct: 138 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNIVKL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 163 QKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
+ I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG + ++ PF
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPF 226
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++KL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ Y
Sbjct: 84 GGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDY 140
Query: 528 CHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH + I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 197
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNIVKL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 163 QKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
+ I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG + ++ PF
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPF 226
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++KL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ Y
Sbjct: 84 GGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDY 140
Query: 528 CHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH + I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 197
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 84
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 141
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNIVKL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 163 QKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
+ I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG + ++ PF
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPF 226
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Query: 469 SGGETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 526
GG ++KL ++ + KT L+ EY + D+ VL+ + + + R +++ A+
Sbjct: 83 CGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALD 139
Query: 527 YCHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
YCH + I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 197
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNIVKL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 163 QKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
+ I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG + ++ PF
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPF 226
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++KL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ Y
Sbjct: 84 GGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDY 140
Query: 528 CHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH + I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 197
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 16/229 (6%)
Query: 49 KLLKTIGKGNFAKVKLAKH-VPTGK--EVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDH 104
+LL+ +G G+F V+ + P+GK VA+K + L+ P ++ REV M LDH
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 74
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQ 163
N+++L+ V+ T + +V E A G + D L H G Q+ + Y
Sbjct: 75 RNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP----PYA--APELFQ 217
K+ IHRDL A NLLL + +KI DFG P N D + P+A APE +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQND-DHYVMQEHRKVPFAWCAPESLK 191
Query: 218 GKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ + D W GV L+ + + G P+ G ++ ++ + R+P
Sbjct: 192 TRTFSHAS-DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
L++L+ V+ T + +V E A G + D L H G Q+ + Y K+
Sbjct: 77 LIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 135
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGF 558
IHRDL A NLLL + +KI DFG
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGL 161
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLAFRHEN 84
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 141
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 576 PYAAPELFQGGAPVTSS 592
Y APE+ T S
Sbjct: 194 WYRAPEIMLNSKGYTKS 210
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 82
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 90
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 147
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 148 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 238
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 140 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 248
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 82
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNIVKL ++ + KT L+ EY + D+ VL+ + + + R +++ A+ YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 163 QKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
+ I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG + ++ PF
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPF 226
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Query: 469 SGGETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 526
GG ++KL ++ + KT L+ EY + D+ VL+ + + + R +++ A+
Sbjct: 83 CGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALD 139
Query: 527 YCHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
YCH + I+HRD+K N+++D E+ +++ D+G + + PG + + S + PEL
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 197
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 86
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKCQHLSNDHICYFLYQILRGLKY 143
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 14/149 (9%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKIIHRDLK 539
IE K +Y+V + E Y +L + + F QI+ ++Y H ++HRDLK
Sbjct: 99 IEQMKDVYIVQDLM---ETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLK 155
Query: 540 AENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPEL------FQGGAPV 589
NLLL++ ++KI DFG + P + L + + Y APE+ + +
Sbjct: 156 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 215
Query: 590 TSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
S G N I P + N I
Sbjct: 216 WSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 82
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 87
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 144
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 145 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 137 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 88
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 145
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 146 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 236
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 138 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 246
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 79
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 136
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 137 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 227
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 129 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 237
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 86
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 80
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 137
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 138 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 130 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 16/229 (6%)
Query: 49 KLLKTIGKGNFAKVKLAKH-VPTGK--EVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDH 104
+LL+ +G G+F V+ + P+GK VA+K + L+ P ++ REV M LDH
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQ 163
N+++L+ V+ T + +V E A G + D L H G Q+ + Y
Sbjct: 81 RNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP----PYA--APELFQ 217
K+ IHRDL A NLLL + +KI DFG P N D + P+A APE +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQND-DHYVMQEHRKVPFAWCAPESLK 197
Query: 218 GKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ + D W GV L+ + + G P+ G ++ ++ + R+P
Sbjct: 198 TRTFSHAS-DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
L++L+ V+ T + +V E A G + D L H G Q+ + Y K+
Sbjct: 83 LIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGF 558
IHRDL A NLLL + +KI DFG
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGL 167
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 82
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+M+ G + DY+ H + + QI + Y
Sbjct: 77 NPHVCRLLGICLT-STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 136 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 196 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 240
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+M+ G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 91 TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 150
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 151 VKTPQHVKITDFGLA 165
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 80
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 137
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 138 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 130 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 86
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYXQRTLREIKILLRFRHEN 86
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+M+ G + DY+ H + + QI + Y
Sbjct: 80 NPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 139 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 198
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 199 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 243
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+M+ G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 94 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 153
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 154 VKTPQHVKITDFGLA 168
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 98/215 (45%), Gaps = 23/215 (10%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRIMKMLDHP 105
Y K IG G+F V AK V EVAIK + DK N RE++IM+++ HP
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLV-ESDEVAIKKVLQDKRFKN--------RELQIMRIVKHP 92
Query: 106 NIVKLFQVI------ETEKTLYLVMEYASGGEVF----DYLVLHGRMKEKEARAKFRQIV 155
N+V L + E L LV+EY V+ Y L M + Q++
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLL 151
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYAAPE 214
++ Y H I HRD+K +NLLLD + K+ DFG + G + S Y APE
Sbjct: 152 RSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPE 211
Query: 215 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST 249
L G +D+WS G ++ L+ G F G +
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 54/127 (42%), Gaps = 16/127 (12%)
Query: 484 EKTLYLVMEYASGGEVF----DYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLK 539
E L LV+EY V+ Y L M + Q++ ++ Y H I HRD+K
Sbjct: 110 EVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIK 168
Query: 540 AENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTN 598
+NLLLD + K+ DFG + G + S Y APEL G TN
Sbjct: 169 PQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFG----------ATN 218
Query: 599 HTHNSSI 605
+T N I
Sbjct: 219 YTTNIDI 225
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFR--EVRIMKMLDHPNIVKLF 111
+G+G+F +V K TG + A+K K +L ++FR E+ L P IV L+
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVK---KVRL------EVFRVEELVACAGLSSPRIVPLY 116
Query: 112 QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDL 171
+ + + ME GG + + G + E A Q + ++Y H ++I+H D+
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 176
Query: 172 KAENLLLDSEMN-IKIADFGFSNEFTP---GNKL---DTFCGSPPYAAPELFQGKKYDGP 224
KA+N+LL S+ + + DFG + P G L D G+ + APE+ GK D
Sbjct: 177 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA- 235
Query: 225 EVDVWSLGVILYTLVSGSLPF 245
+VD+WS ++ +++G P+
Sbjct: 236 KVDIWSSCCMMLHMLNGCHPW 256
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L+ + + + ME GG + + G + E A Q + ++Y H ++I
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI 171
Query: 534 IHRDLKAENLLLDSEMN-IKIADFGFSNEFTP---GNKL---DTFCGSPPYAAPELFQG 585
+H D+KA+N+LL S+ + + DFG + P G L D G+ + APE+ G
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+M+ G + DY+ H + + QI + Y
Sbjct: 78 NPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 197 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 241
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+M+ G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 92 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 152 VKTPQHVKITDFGLA 166
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 16/229 (6%)
Query: 49 KLLKTIGKGNFAKVKLAKH-VPTGK--EVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDH 104
+LL+ +G G+F V+ + P+GK VA+K + L+ P ++ REV M LDH
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 74
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQ 163
N+++L+ V+ T + +V E A G + D L H G Q+ + Y
Sbjct: 75 RNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP----PYA--APELFQ 217
K+ IHRDL A NLLL + +KI DFG P N D + P+A APE +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQND-DHYVMQEHRKVPFAWCAPESLK 191
Query: 218 GKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ + D W GV L+ + + G P+ G ++ ++ + R+P
Sbjct: 192 TRTFSHAS-DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
L++L+ V+ T + +V E A G + D L H G Q+ + Y K+
Sbjct: 77 LIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 135
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGF 558
IHRDL A NLLL + +KI DFG
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGL 161
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAI+ I + + Q+ RE++I+ H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFE-HQTYCQRTLREIKILLRFRHEN 86
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 82
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + + Y APE+
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L + +
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 114/242 (47%), Gaps = 19/242 (7%)
Query: 52 KTIGKGNFAKVK--LAKHVPTGKEVAIKIIDKTQLNPGSLQK----LFREVRIMKMLDHP 105
K IG G F +V + K KEV + I KT L G +K E IM H
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAI--KT-LKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 164
NI++L VI K + ++ EY G + +L G + R I + ++Y
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPELFQGKK 220
+HRDL A N+L++S + K++DFG S E P T G P + APE +K
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 221 YDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKF 279
+ DVWS G++++ +++ G P+ + E+ + + G +R+P M DC + + +
Sbjct: 227 FTSAS-DVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-FRLPTPM--DCPSAIYQL 282
Query: 280 LV 281
++
Sbjct: 283 MM 284
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L VI K + ++ EY G + +L G + R I + ++Y
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPP--YAAPE 581
+HRDL A N+L++S + K++DFG S E P T G P + APE
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+M+ G + DY+ H + + QI + Y
Sbjct: 79 NPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 198 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 242
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+M+ G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 93 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 152
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 153 VKTPQHVKITDFGLA 167
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+M+ G + DY+ H + + QI + Y
Sbjct: 77 NPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 136 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 196 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 240
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+M+ G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 91 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 150
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 151 VKTPQHVKITDFGLA 165
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 16/229 (6%)
Query: 49 KLLKTIGKGNFAKVKLAKH-VPTGK--EVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDH 104
+LL+ +G G+F V+ + P+GK VA+K + L+ P ++ REV M LDH
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQ 163
N+++L+ V+ T + +V E A G + D L H G Q+ + Y
Sbjct: 71 RNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP----PYA--APELFQ 217
K+ IHRDL A NLLL + +KI DFG P N D + P+A APE +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQND-DHYVMQEHRKVPFAWCAPESLK 187
Query: 218 GKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ + D W GV L+ + + G P+ G ++ ++ + R+P
Sbjct: 188 TRTFSHAS-DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
L++L+ V+ T + +V E A G + D L H G Q+ + Y K+
Sbjct: 73 LIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGF 558
IHRDL A NLLL + +KI DFG
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD--- 103
+Y+ + IG G + V A+ +G VA+K + G REV +++ L+
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 104 HPNIVKLFQVIETEKT-----LYLVMEYASGGEVFDYL--VLHGRMKEKEARAKFRQIVS 156
HPN+V+L V T +T + LV E+ ++ YL + + + RQ +
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+ + H I+HRDLK EN+L+ S +K+ADFG + ++ L + Y APE+
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVL 183
Query: 217 QGKKYDGPEVDVWSLGVIL 235
Y P VD+WS+G I
Sbjct: 184 LQSTYATP-VDMWSVGCIF 201
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPY 577
RQ + + + H I+HRDLK EN+L+ S +K+ADFG + ++ L + Y
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWY 177
Query: 578 AAPELF 583
APE+
Sbjct: 178 RAPEVL 183
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 16/229 (6%)
Query: 49 KLLKTIGKGNFAKVKLAKH-VPTGK--EVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDH 104
+LL+ +G G+F V+ + P+GK VA+K + L+ P ++ REV M LDH
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQ 163
N+++L+ V+ T + +V E A G + D L H G Q+ + Y
Sbjct: 71 RNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP----PYA--APELFQ 217
K+ IHRDL A NLLL + +KI DFG P N D + P+A APE +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQND-DHYVMQEHRKVPFAWCAPESLK 187
Query: 218 GKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ + D W GV L+ + + G P+ G ++ ++ + R+P
Sbjct: 188 TRTFSHAS-DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
L++L+ V+ T + +V E A G + D L H G Q+ + Y K+
Sbjct: 73 LIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGF 558
IHRDL A NLLL + +KI DFG
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+M+ G + DY+ H + + QI + Y
Sbjct: 76 NPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 195 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 239
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+M+ G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 90 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 150 VKTPQHVKITDFGLA 164
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 49 KLLKTIGKGNFAKVKLAKH-VPTGK--EVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDH 104
+LL+ +G G+F V+ + P+GK VA+K + L+ P ++ REV M LDH
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQ 163
N+++L+ V+ T + +V E A G + D L H G Q+ + Y
Sbjct: 81 RNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP-PYAAPELFQG 218
K+ IHRDL A NLLL + +KI DFG P N + P + APE +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 219 KKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ + D W GV L+ + + G P+ G ++ ++ + R+P
Sbjct: 199 RTFSHAS-DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
L++L+ V+ T + +V E A G + D L H G Q+ + Y K+
Sbjct: 83 LIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGF 558
IHRDL A NLLL + +KI DFG
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGL 167
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFR--EVRIMKMLDHPNIVKLF 111
+G+G+F +V K TG + A+K K +L ++FR E+ L P IV L+
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVK---KVRL------EVFRVEELVACAGLSSPRIVPLY 132
Query: 112 QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDL 171
+ + + ME GG + + G + E A Q + ++Y H ++I+H D+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 192
Query: 172 KAENLLLDSEMN-IKIADFGFSNEFTP---GNKL---DTFCGSPPYAAPELFQGKKYDGP 224
KA+N+LL S+ + + DFG + P G L D G+ + APE+ GK D
Sbjct: 193 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA- 251
Query: 225 EVDVWSLGVILYTLVSGSLPF 245
+VD+WS ++ +++G P+
Sbjct: 252 KVDIWSSCCMMLHMLNGCHPW 272
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L+ + + + ME GG + + G + E A Q + ++Y H ++I
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI 187
Query: 534 IHRDLKAENLLLDSEMN-IKIADFGFSNEFTP---GNKL---DTFCGSPPYAAPELFQG 585
+H D+KA+N+LL S+ + + DFG + P G L D G+ + APE+ G
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFR--EVRIMKMLDHPNIVKLF 111
+G+G+F +V K TG + A+K K +L ++FR E+ L P IV L+
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVK---KVRL------EVFRVEELVACAGLSSPRIVPLY 130
Query: 112 QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDL 171
+ + + ME GG + + G + E A Q + ++Y H ++I+H D+
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 190
Query: 172 KAENLLLDSEMN-IKIADFGFSNEFTP---GNKL---DTFCGSPPYAAPELFQGKKYDGP 224
KA+N+LL S+ + + DFG + P G L D G+ + APE+ GK D
Sbjct: 191 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA- 249
Query: 225 EVDVWSLGVILYTLVSGSLPF 245
+VD+WS ++ +++G P+
Sbjct: 250 KVDIWSSCCMMLHMLNGCHPW 270
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L+ + + + ME GG + + G + E A Q + ++Y H ++I
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI 185
Query: 534 IHRDLKAENLLLDSEMN-IKIADFGFSNEFTP---GNKL---DTFCGSPPYAAPELFQG 585
+H D+KA+N+LL S+ + + DFG + P G L D G+ + APE+ G
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 120/268 (44%), Gaps = 33/268 (12%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTG--KEVAIKIIDKTQLNPGSLQKLFREVRIM-KMLDHP 105
K IG+GNF +V A+ G + AIK + K + + E+ ++ K+ HP
Sbjct: 25 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLGHHP 83
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL----VLH------------GRMKEKEARA 149
NI+ L E LYL +EYA G + D+L VL + ++
Sbjct: 84 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 150 KFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--LDTFCGS 207
+ + Y QK+ IHR+L A N+L+ KIADFG S G + + G
Sbjct: 144 FAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGR 199
Query: 208 PP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
P + A E Y DVWS GV+L+ +VS G P+ G T EL E++ +G YR+
Sbjct: 200 LPVRWMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YRL 257
Query: 265 --PFYMSTDCENLLKKFLVLNPAKRASL 290
P + +L+++ P +R S
Sbjct: 258 EKPLNCDDEVYDLMRQCWREKPYERPSF 285
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 16/102 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL----VLH------------GRMKEKEARAK 517
++ L E LYL +EYA G + D+L VL + ++
Sbjct: 85 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
+ + Y QK+ IHR+L A N+L+ KIADFG S
Sbjct: 145 AADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS 186
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD--- 103
+Y+ + IG G + V A+ +G VA+K + G REV +++ L+
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 104 HPNIVKLFQVIETEKT-----LYLVMEYASGGEVFDYL--VLHGRMKEKEARAKFRQIVS 156
HPN+V+L V T +T + LV E+ ++ YL + + + RQ +
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+ + H I+HRDLK EN+L+ S +K+ADFG + ++ L + Y APE+
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVL 183
Query: 217 QGKKYDGPEVDVWSLGVIL 235
Y P VD+WS+G I
Sbjct: 184 LQSTYATP-VDMWSVGCIF 201
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPY 577
RQ + + + H I+HRDLK EN+L+ S +K+ADFG + ++ L + Y
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWY 177
Query: 578 AAPELF 583
APE+
Sbjct: 178 RAPEVL 183
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 104/201 (51%), Gaps = 10/201 (4%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y+L++ +G+G +++V A ++ ++VA+KI+ + + E + PNI
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILE----NLRGGPNI 94
Query: 108 VKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
+ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ YCH
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 166 IIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
I+HRD+K N+L+D E +++ D+G + + PG + + S + PEL +
Sbjct: 152 IMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 225 EVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 212 SLDMWSLGCMLASMIFRKEPF 232
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ Y
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 528 CHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH I+HRD+K N+L+D E +++ D+G + + PG + + S + PEL
Sbjct: 147 CHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 203
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 49 KLLKTIGKGNFAKVKLAKH-VPTGK--EVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDH 104
+LL+ +G G+F V+ + P+GK VA+K + L+ P ++ REV M LDH
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQ 163
N+++L+ V+ T + +V E A G + D L H G Q+ + Y
Sbjct: 71 RNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP-PYAAPELFQG 218
K+ IHRDL A NLLL + +KI DFG P N + P + APE +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 219 KKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ + D W GV L+ + + G P+ G ++ ++ + R+P
Sbjct: 189 RTFSHAS-DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
L++L+ V+ T + +V E A G + D L H G Q+ + Y K+
Sbjct: 73 LIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGF 558
IHRDL A NLLL + +KI DFG
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 13/213 (6%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G G + V A +G++VAIK + + + ++ +RE+ ++K + H N++ L V
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 114 IETEKTL------YLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKI 166
+L YLVM + D + G + E++ + Q++ ++Y H +
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQT----DLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGV 147
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
+HRDLK NL ++ + +KI DFG + ++ + + Y APE+ + V
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLARH--ADAEMTGYVVTRWYRAPEVILSWMHYNQTV 205
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
D+WS+G I+ +++G F G + ++L+
Sbjct: 206 DIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 238
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 487 LYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL 545
YLVM + D + G + E++ + Q++ ++Y H ++HRDLK NL +
Sbjct: 104 FYLVMPFMQT----DLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 159
Query: 546 DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
+ + +KI DFG + ++ + + Y APE+
Sbjct: 160 NEDCELKILDFGLARH--ADAEMTGYVVTRWYRAPEV 194
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L+ IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFE-HQTYCQRTLREIQILLRFRHEN 102
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
++ + ++ E + +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLM---ETDLYKLLKSQQLSNDHICYFLYQILRGLKY 159
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLL+++ ++KI DFG + P + L + Y APE+
Sbjct: 160 IHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIM 219
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLL+++ ++KI DFG + P + L +
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 86
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + Y APE+
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 203
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L +
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 14/211 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 87
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
I+ + +I E K +Y+V + E Y +L + + F QI+ ++Y
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 144
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSPPYAAPELF 216
H ++HRDLK NLLL++ ++KI DFG + P + L + Y APE+
Sbjct: 145 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 204
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
K +D+WS+G IL ++S F G
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + L +
Sbjct: 137 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 576 PYAAPEL------FQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI 618
Y APE+ + + S G N I P + N I
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 123/251 (49%), Gaps = 13/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+M+ G + DY+ H + + QI + Y
Sbjct: 78 NPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPF--YMSTDCENLL 276
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P + D ++
Sbjct: 197 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIM 254
Query: 277 KKFLVLNPAKR 287
+K +++ R
Sbjct: 255 RKCWMIDADSR 265
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+M+ G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 92 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 545 LDSEMNIKIADFG 557
+ + ++KI DFG
Sbjct: 152 VKTPQHVKITDFG 164
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 136/295 (46%), Gaps = 48/295 (16%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-----------NPGSLQ 90
+ +I Y++++T+ +G F K+ L + K A+K +K+ L + S++
Sbjct: 27 DKYINDYRIIRTLNQGKFNKIILCE--KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIK 84
Query: 91 KLF----REVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEV--FD--YLVLHGR- 141
+ E++I+ + + + +I +Y++ EY + FD + VL
Sbjct: 85 SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY 144
Query: 142 ---MKEKEARAKFRQIVSAVQYCH-QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP 197
+ + + + ++++ Y H +K I HRD+K N+L+D +K++DFG +E+
Sbjct: 145 TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG-ESEYMV 203
Query: 198 GNKLDTFCGSPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPFD-GSTLRELRE 255
K+ G+ + PE F + Y+G +VD+WSLG+ LY + +PF +L EL
Sbjct: 204 DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFN 263
Query: 256 RVL---------RGKYRIPF----------YMSTDCENLLKKFLVLNPAKRASLE 291
+ R + P ++S + + LK FL NPA+R + E
Sbjct: 264 NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE 318
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 480 VIETEKTLYLVMEYASGGEV--FD--YLVLHGR----MKEKEARAKFRQIVSAVQYCH-Q 530
+I +Y++ EY + FD + VL + + + + ++++ Y H +
Sbjct: 111 IITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE 170
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVT 590
K I HRD+K N+L+D +K++DFG +E+ K+ G+ + PE F +
Sbjct: 171 KNICHRDVKPSNILMDKNGRVKLSDFG-ESEYMVDKKIKGSRGTYEFMPPEFFSNES--- 226
Query: 591 SSGGAGTN 598
S GA +
Sbjct: 227 SYNGAKVD 234
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 13/213 (6%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV 113
+G G + V A +G++VAIK + + + ++ +RE+ ++K + H N++ L V
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 114 IETEKTL------YLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKI 166
+L YLVM + D + G E++ + Q++ ++Y H +
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQT----DLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGV 165
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
+HRDLK NL ++ + +KI DFG + ++ + + Y APE+ + V
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLARH--ADAEMTGYVVTRWYRAPEVILSWMHYNQTV 223
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
D+WS+G I+ +++G F G + ++L+
Sbjct: 224 DIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 256
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 487 LYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL 545
YLVM + D + G E++ + Q++ ++Y H ++HRDLK NL +
Sbjct: 122 FYLVMPFMQT----DLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 177
Query: 546 DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
+ + +KI DFG + ++ + + Y APE+
Sbjct: 178 NEDCELKILDFGLARH--ADAEMTGYVVTRWYRAPEV 212
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+M+ G + DY+ H + + QI + Y
Sbjct: 78 NPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 197 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 241
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+M+ G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 92 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 545 LDSEMNIKIADFG 557
+ + ++KI DFG
Sbjct: 152 VKTPQHVKITDFG 164
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEV-AIKIIDKTQLNPGSLQKLFREVRIM-KMLDHP 105
Y +LK IG G +KV + + K++ AIK ++ + + +L E+ + K+ H
Sbjct: 58 YSILKQIGSGGSSKV--FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 106 N-IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
+ I++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ---G 218
I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE +
Sbjct: 175 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 219 KKYDGPEV-------DVWSLGVILYTLVSGSLPFDG--STLRELRERVLRGKYRIPF--Y 267
+ +G DVWSLG ILY + G PF + + +L ++ + I F
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA-IIDPNHEIEFPDI 292
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
D +++LK L +P +R S+
Sbjct: 293 PEKDLQDVLKCCLKRDPKQRISI 315
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
+ +++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPE 581
I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE
Sbjct: 175 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKEVAIKII------DKTQLNPGSLQKLFREVRIMKMLDHP 105
K IGKG F V + V VAIK + +T++ Q+ REV IM L+HP
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE-KFQEFQREVFIMSNLNHP 83
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR-QIVSAVQYCHQK 164
NIVKL+ ++ +VME+ G+++ L+ + + + I ++Y +
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 165 K--IIHRDLKAENLLLDS-----EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 217
I+HRDL++ N+ L S + K+ADFG S + + + G+ + APE
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV--HSVSGLLGNFQWMAPETIG 199
Query: 218 GKKYDGPE-VDVWSLGVILYTLVSGSLPFD 246
++ E D +S +ILYT+++G PFD
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFD 229
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 489 LVMEYASGGEVFDYLVLHGRMKEKEARAKFR-QIVSAVQYCHQKK--IIHRDLKAENLLL 545
+VME+ G+++ L+ + + + I ++Y + I+HRDL++ N+ L
Sbjct: 98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFL 157
Query: 546 DS-----EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
S + K+ADFG S + + + G+ + APE
Sbjct: 158 QSLDENAPVCAKVADFGLSQQSV--HSVSGLLGNFQWMAPE 196
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEV-AIKIIDKTQLNPGSLQKLFREVRIM-KMLDHP 105
Y +LK IG G +KV + + K++ AIK ++ + + +L E+ + K+ H
Sbjct: 58 YSILKQIGSGGSSKV--FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 106 N-IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
+ I++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ---G 218
I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE +
Sbjct: 175 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSS 233
Query: 219 KKYDGPEV-------DVWSLGVILYTLVSGSLPFDG--STLRELRERVLRGKYRIPF--Y 267
+ +G DVWSLG ILY + G PF + + +L ++ + I F
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA-IIDPNHEIEFPDI 292
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
D +++LK L +P +R S+
Sbjct: 293 PEKDLQDVLKCCLKRDPKQRISI 315
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
+ +++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPE 581
I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE
Sbjct: 175 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE 226
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+M+ G + DY+ H + + QI + Y
Sbjct: 80 NPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 139 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 198
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 199 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 243
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+M+ G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 94 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 153
Query: 545 LDSEMNIKIADFG 557
+ + ++KI DFG
Sbjct: 154 VKTPQHVKITDFG 166
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 136/301 (45%), Gaps = 20/301 (6%)
Query: 43 PHIGKYKLLKTIGKG--NFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
P G Y+LL IGKG + V LA++ PTG+ V ++ I+ + + L E+ + K
Sbjct: 6 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSK 65
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAV 158
+ +HPNIV + L++V + + G D + H M E + ++ A+
Sbjct: 66 LFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKAL 125
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-NEFTPGNKLDTFCGSP-------PY 210
Y H +HR +KA ++L+ + + ++ + + + G + P P+
Sbjct: 126 DYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPW 185
Query: 211 AAPELFQG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYM 268
+PE+ Q + YD + D++S+G+ L +G +PF ++ L G +P +
Sbjct: 186 LSPEVLQQNLQGYDA-KSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGT--VPCLL 242
Query: 269 STDCENLLKKFLVLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPTNFKR 328
D + + L ++P++ + + P S+G + + H ++ + SP +F
Sbjct: 243 --DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPS-HPYHRTFSPHFHHFVE 299
Query: 329 Q 329
Q
Sbjct: 300 Q 300
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 484 EKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAE 541
+ L++V + + G D + H M E + ++ A+ Y H +HR +KA
Sbjct: 82 DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKAS 141
Query: 542 NLLLDSEMNIKIA 554
++L+ + + ++
Sbjct: 142 HILISVDGKVYLS 154
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 112/248 (45%), Gaps = 13/248 (5%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 110
L +G G +V + TG +A+K + ++ + + L ++K D P IV+
Sbjct: 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLV--LHGRMKEKEARAKFRQIVSAVQYCHQKK-II 167
F T +++ ME G + L + G + E+ IV A+ Y +K +I
Sbjct: 90 FGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVI 147
Query: 168 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE-- 225
HRD+K N+LLD IK+ DFG S D G Y APE P+
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYD 207
Query: 226 --VDVWSLGVILYTLVSGSLPF-DGSTLRELRERVLRGK-YRIPFYM--STDCENLLKKF 279
DVWSLG+ L L +G P+ + T E+ +VL+ + +P +M S D ++ +K
Sbjct: 208 IRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDC 267
Query: 280 LVLNPAKR 287
L + KR
Sbjct: 268 LTKDHRKR 275
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 521 IVSAVQYCHQKK-IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAA 579
IV A+ Y +K +IHRD+K N+LLD IK+ DFG S D G Y A
Sbjct: 133 IVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMA 192
Query: 580 PE 581
PE
Sbjct: 193 PE 194
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 76 NPHVCRLLGICLT-STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 195 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 239
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 90 TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 150 VKTPQHVKITDFGLA 164
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 11/225 (4%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRI-MKMLDHPNIVK 109
+ +G+G + V+ +HVP+G+ A+K I T +N ++L ++ I + +D P V
Sbjct: 39 IXELGRGAYGVVEKXRHVPSGQIXAVKRIRAT-VNSQEQKRLLXDLDISXRTVDCPFTVT 97
Query: 110 LFQVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFR-QIVSAVQYCHQK-K 165
+ + E +++ E S + + ++ G+ ++ K IV A+++ H K
Sbjct: 98 FYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 157
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ---GKKYD 222
+IHRD+K N+L+++ +K DFG S D G PY APE +K
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGY 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIP 265
+ D+WSLG+ L P+D G+ ++L++ V ++P
Sbjct: 218 SVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP 262
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 521 IVSAVQYCHQK-KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAA 579
IV A+++ H K +IHRD+K N+L+++ +K DFG S D G PY A
Sbjct: 145 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXA 204
Query: 580 PE 581
PE
Sbjct: 205 PE 206
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 139/305 (45%), Gaps = 28/305 (9%)
Query: 43 PHIGKYKLLKTIGKG--NFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
P G Y+LL IGKG + V LA++ PTG+ V ++ I+ + + L E+ + K
Sbjct: 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSK 81
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAV 158
+ +HPNIV + L++V + + G D + H M E + ++ A+
Sbjct: 82 LFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKAL 141
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-NEFTPGNKLDTFCGSP-------PY 210
Y H +HR +KA ++L+ + + ++ + + + G + P P+
Sbjct: 142 DYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPW 201
Query: 211 AAPELFQG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYM 268
+PE+ Q + YD + D++S+G+ L +G +PF ++ L G +P +
Sbjct: 202 LSPEVLQQNLQGYDA-KSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGT--VPCLL 258
Query: 269 STDCENLLKKFLVLNPAKRASLEVSGEVTLGGAPVTS----SGGAGTNHTHNSSISPAPT 324
D + + L ++P++ S+ SG L + TS S G +H ++ + SP
Sbjct: 259 --DTSTIPAEELTMSPSR--SVANSG---LSDSLTTSTPRPSNGDSPSHPYHRTFSPHFH 311
Query: 325 NFKRQ 329
+F Q
Sbjct: 312 HFVEQ 316
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 484 EKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAE 541
+ L++V + + G D + H M E + ++ A+ Y H +HR +KA
Sbjct: 98 DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKAS 157
Query: 542 NLLLDSEMNIKIA 554
++L+ + + ++
Sbjct: 158 HILISVDGKVYLS 170
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K + G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+M+ G + DY+ H + + QI + Y
Sbjct: 83 NPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 202 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 246
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+M+ G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 97 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 156
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 157 VKTPQHVKITDFGLA 171
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 82 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 140
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 141 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 200
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 201 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 245
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 96 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 155
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 156 VKTPQHVKITDFGLA 170
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEV-AIKIIDKTQLNPGSLQKLFREVRIM-KMLDHP 105
Y +LK IG G +KV + + K++ AIK ++ + + +L E+ + K+ H
Sbjct: 58 YSILKQIGSGGSSKV--FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 106 N-IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
+ I++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ---G 218
I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE +
Sbjct: 175 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 219 KKYDGPEV-------DVWSLGVILYTLVSGSLPFDG--STLRELRERVLRGKYRIPF--Y 267
+ +G DVWSLG ILY + G PF + + +L ++ + I F
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA-IIDPNHEIEFPDI 292
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
D +++LK L +P +R S+
Sbjct: 293 PEKDLQDVLKCCLKRDPKQRISI 315
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
+ +++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPE 581
I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE
Sbjct: 175 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 13/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 79 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPF--YMSTDCENLL 276
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P + D ++
Sbjct: 198 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIM 255
Query: 277 KKFLVLNPAKR 287
+K +++ R
Sbjct: 256 RKCWMIDADSR 266
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 93 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 152
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 153 VKTPQHVKITDFGLA 167
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 83 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 202 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 246
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 97 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 156
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 157 VKTPQHVKITDFGLA 171
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 101 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 159
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 160 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 219
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 220 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 264
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 115 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 174
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 175 VKTPQHVKITDFGLA 189
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 78 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 197 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 241
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 92 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 152 VKTPQHVKITDFGLA 166
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 36/261 (13%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKEVAIKII------DKTQLNPGSLQKLFREVRIMKMLDHP 105
K IGKG F V + V VAIK + +T++ Q+ REV IM L+HP
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE-KFQEFQREVFIMSNLNHP 83
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR-QIVSAVQYCHQK 164
NIVKL+ ++ +VME+ G+++ L+ + + + I ++Y +
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 165 K--IIHRDLKAENLLLDS-----EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 217
I+HRDL++ N+ L S + K+ADFG S + + + G+ + APE
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSV--HSVSGLLGNFQWMAPETIG 199
Query: 218 GKKYDGPE-VDVWSLGVILYTLVSGSLPFDGST------LRELRERVLRGKYRIPFYMST 270
++ E D +S +ILYT+++G PFD + + +RE LR IP
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT--IP----E 253
Query: 271 DCENLLKKFLVL----NPAKR 287
DC L+ + L +P KR
Sbjct: 254 DCPPRLRNVIELCWSGDPKKR 274
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 489 LVMEYASGGEVFDYLVLHGRMKEKEARAKFR-QIVSAVQYCHQKK--IIHRDLKAENLLL 545
+VME+ G+++ L+ + + + I ++Y + I+HRDL++ N+ L
Sbjct: 98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFL 157
Query: 546 DS-----EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
S + K+ADFG S + + + G+ + APE
Sbjct: 158 QSLDENAPVCAKVADFGTSQQSV--HSVSGLLGNFQWMAPE 196
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 127/259 (49%), Gaps = 16/259 (6%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKE----VAIKII-DKTQLNPGSLQKLFREVRIMKMLDHP 105
LK +G G F V +P G+ V IK+I DK+ S Q + + + LDH
Sbjct: 36 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQ--SFQAVTDHMLAIGSLDHA 93
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQK 164
+IV+L + +L LV +Y G + D++ H G + + QI + Y +
Sbjct: 94 HIVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 152
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--LDTFCGSP-PYAAPELFQGKKY 221
++HR+L A N+LL S +++ADFG ++ P +K L + +P + A E KY
Sbjct: 153 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 212
Query: 222 DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYMSTDCENLLKKF 279
+ DVWS GV ++ L++ G+ P+ G L E+ + + +G + P + D ++ K
Sbjct: 213 TH-QSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKC 271
Query: 280 LVLNPAKRASL-EVSGEVT 297
+++ R + E++ E T
Sbjct: 272 WMIDENIRPTFKELANEFT 290
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
+L LV +Y G + D++ H G + + QI + Y + ++HR+L A N+L
Sbjct: 106 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVL 165
Query: 545 LDSEMNIKIADFGFSNEFTPGNK 567
L S +++ADFG ++ P +K
Sbjct: 166 LKSPSQVQVADFGVADLLPPDDK 188
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 79 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 198 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 242
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 93 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 152
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 153 VKTPQHVKITDFGLA 167
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 79 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 198 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 242
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 93 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 152
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 153 VKTPQHVKITDFGLA 167
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 119/275 (43%), Gaps = 38/275 (13%)
Query: 51 LKTIGKGNFAKVKLAKH---VPTG--KEVAIKIIDKTQLNPGSLQKLF-REVRIMKMLDH 104
++ IG+G F +V A+ +P VA+K++ + +Q F RE +M D+
Sbjct: 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDN 109
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYL-------VLHGRMKEKEARAKF------ 151
PNIVKL V K + L+ EY + G++ ++L V + RA+
Sbjct: 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 152 -----------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN- 199
RQ+ + + Y ++K +HRDL N L+ M +KIADFG S +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 229
Query: 200 -KLDTFCGSPP-YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGSTLRELRER 256
K D P + PE +Y E DVW+ GV+L+ + S L P+ G E+
Sbjct: 230 YKADGNDAIPIRWMPPESIFYNRYTT-ESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY 288
Query: 257 VLRGK-YRIPFYMSTDCENLLKKFLVLNPAKRASL 290
V G P + NL++ PA R S
Sbjct: 289 VRDGNILACPENCPLELYNLMRLCWSKLPADRPSF 323
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 24/110 (21%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL-------VLHGRMKEKEARAKF-------- 518
++KL V K + L+ EY + G++ ++L V + RA+
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 519 ---------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
RQ+ + + Y ++K +HRDL N L+ M +KIADFG S
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 76 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 195 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 239
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 90 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 150 VKTPQHVKITDFGLA 164
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 13/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 86 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 144
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 145 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 204
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPF--YMSTDCENLL 276
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P + D ++
Sbjct: 205 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIM 262
Query: 277 KKFLVLNPAKR 287
+K +++ R
Sbjct: 263 RKCWMIDADSR 273
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 100 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 159
Query: 545 LDSEMNIKIADFGFSN 560
+ + ++KI DFG +
Sbjct: 160 VKTPQHVKITDFGLAK 175
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 127/259 (49%), Gaps = 16/259 (6%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKE----VAIKII-DKTQLNPGSLQKLFREVRIMKMLDHP 105
LK +G G F V +P G+ V IK+I DK+ S Q + + + LDH
Sbjct: 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQ--SFQAVTDHMLAIGSLDHA 75
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQK 164
+IV+L + +L LV +Y G + D++ H G + + QI + Y +
Sbjct: 76 HIVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 134
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--LDTFCGSP-PYAAPELFQGKKY 221
++HR+L A N+LL S +++ADFG ++ P +K L + +P + A E KY
Sbjct: 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 194
Query: 222 DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYMSTDCENLLKKF 279
+ DVWS GV ++ L++ G+ P+ G L E+ + + +G + P + D ++ K
Sbjct: 195 TH-QSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKC 253
Query: 280 LVLNPAKRASL-EVSGEVT 297
+++ R + E++ E T
Sbjct: 254 WMIDENIRPTFKELANEFT 272
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
+L LV +Y G + D++ H G + + QI + Y + ++HR+L A N+L
Sbjct: 88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVL 147
Query: 545 LDSEMNIKIADFGFSNEFTPGNK 567
L S +++ADFG ++ P +K
Sbjct: 148 LKSPSQVQVADFGVADLLPPDDK 170
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 73 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLE 131
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 132 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 191
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 192 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 236
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 87 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVL 146
Query: 545 LDSEMNIKIADFGFSN 560
+ + ++KI DFG +
Sbjct: 147 VKTPQHVKITDFGLAK 162
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 13/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 76 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPF--YMSTDCENLL 276
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P + D ++
Sbjct: 195 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIM 252
Query: 277 KKFLVLNPAKR 287
+K +++ R
Sbjct: 253 RKCWMIDADSR 263
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 90 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 545 LDSEMNIKIADFGFSN 560
+ + ++KI DFG +
Sbjct: 150 VKTPQHVKITDFGLAK 165
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEV-AIKIIDKTQLNPGSLQKLFREVRIM-KMLDHP 105
Y +LK IG G +KV + + K++ AIK ++ + + +L E+ + K+ H
Sbjct: 11 YSILKQIGSGGSSKV--FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68
Query: 106 N-IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
+ I++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ
Sbjct: 69 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ---G 218
I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE +
Sbjct: 128 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 219 KKYDGPEV-------DVWSLGVILYTLVSGSLPFDG--STLRELRERVLRGKYRIPF--Y 267
+ +G DVWSLG ILY + G PF + + +L ++ + I F
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA-IIDPNHEIEFPDI 245
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
D +++LK L +P +R S+
Sbjct: 246 PEKDLQDVLKCCLKRDPKQRISI 268
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
+ +++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ
Sbjct: 69 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPE 581
I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE
Sbjct: 128 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 37/230 (16%)
Query: 52 KTIGKGNFAKV--KLAKHVPTGKE----VAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
KT+G+G F KV A H+ G+ VA+K++ K +P L+ L E ++K ++HP
Sbjct: 29 KTLGEGEFGKVVKATAFHL-KGRAGYTTVAVKML-KENASPSELRDLLSEFNVLKQVNHP 86
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARA 149
+++KL+ + L L++EYA G + +L + + RA
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 150 KFR--------QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNK 200
QI +QY + K++HRDL A N+L+ +KI+DFG S + + +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 201 LDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG 247
+ G P + A E Y + DVWS GV+L+ +V+ G P+ G
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIVTLGGNPYPG 255
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
QI +QY + K++HRDL A N+L+ +KI+DFG S +
Sbjct: 158 QISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 70 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 128
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 129 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 188
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 189 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 233
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 84 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 143
Query: 545 LDSEMNIKIADFGFSN 560
+ + ++KI DFG +
Sbjct: 144 VKTPQHVKITDFGLAK 159
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 13/251 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 78 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPF--YMSTDCENLL 276
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P + D ++
Sbjct: 197 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIM 254
Query: 277 KKFLVLNPAKR 287
+K +++ R
Sbjct: 255 RKCWMIDADSR 265
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 92 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 545 LDSEMNIKIADFG 557
+ + ++KI DFG
Sbjct: 152 VKTPQHVKITDFG 164
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 37/230 (16%)
Query: 52 KTIGKGNFAKV--KLAKHVPTGKE----VAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
KT+G+G F KV A H+ G+ VA+K++ K +P L+ L E ++K ++HP
Sbjct: 29 KTLGEGEFGKVVKATAFHL-KGRAGYTTVAVKML-KENASPSELRDLLSEFNVLKQVNHP 86
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARA 149
+++KL+ + L L++EYA G + +L + + RA
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 150 KFR--------QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNK 200
QI +QY + K++HRDL A N+L+ +KI+DFG S + + +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 201 LDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG 247
+ G P + A E Y + DVWS GV+L+ +V+ G P+ G
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIVTLGGNPYPG 255
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
QI +QY + K++HRDL A N+L+ +KI+DFG S +
Sbjct: 158 QISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEV-AIKIIDKTQLNPGSLQKLFREVRIM-KMLDHP 105
Y +LK IG G +KV + + K++ AIK ++ + + +L E+ + K+ H
Sbjct: 30 YSILKQIGSGGSSKV--FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87
Query: 106 N-IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
+ I++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL---DTFCGSPPYAAPELFQ---G 218
I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE +
Sbjct: 147 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 219 KKYDGPEV-------DVWSLGVILYTLVSGSLPFDG--STLRELRERVLRGKYRIPF--Y 267
+ +G DVWSLG ILY + G PF + + +L ++ + I F
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH-AIIDPNHEIEFPDI 264
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
D +++LK L +P +R S+
Sbjct: 265 PEKDLQDVLKCCLKRDPKQRISI 287
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 466 RASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 525
+ + +++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV
Sbjct: 82 KLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV 140
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL---DTFCGSPPYAAPE 581
HQ I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE
Sbjct: 141 HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE 198
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 83 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 202 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 246
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 97 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 156
Query: 545 LDSEMNIKIADFG 557
+ + ++KI DFG
Sbjct: 157 VKTPQHVKITDFG 169
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKEVAIKII------DKTQLNPGSLQKLFREVRIMKMLDHP 105
K IGKG F V + V VAIK + +T++ Q+ REV IM L+HP
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE-KFQEFQREVFIMSNLNHP 83
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR-QIVSAVQYCHQK 164
NIVKL+ ++ +VME+ G+++ L+ + + + I ++Y +
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 165 K--IIHRDLKAENLLLDS-----EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 217
I+HRDL++ N+ L S + K+ADF S + + + G+ + APE
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSV--HSVSGLLGNFQWMAPETIG 199
Query: 218 GKKYDGPE-VDVWSLGVILYTLVSGSLPFD 246
++ E D +S +ILYT+++G PFD
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFD 229
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 489 LVMEYASGGEVFDYLVLHGRMKEKEARAKFR-QIVSAVQYCHQKK--IIHRDLKAENLLL 545
+VME+ G+++ L+ + + + I ++Y + I+HRDL++ N+ L
Sbjct: 98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFL 157
Query: 546 DS-----EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
S + K+ADF S + + + G+ + APE
Sbjct: 158 QSLDENAPVCAKVADFSLSQQSV--HSVSGLLGNFQWMAPE 196
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEV-AIKIIDKTQLNPGSLQKLFREVRIM-KMLDHP 105
Y +LK IG G +KV + + K++ AIK ++ + + +L E+ + K+ H
Sbjct: 30 YSILKQIGSGGSSKV--FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87
Query: 106 N-IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
+ I++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ---G 218
I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE +
Sbjct: 147 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 219 KKYDGPEV-------DVWSLGVILYTLVSGSLPFDG--STLRELRERVLRGKYRIPF--Y 267
+ +G DVWSLG ILY + G PF + + +L ++ + I F
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA-IIDPNHEIEFPDI 264
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
D +++LK L +P +R S+
Sbjct: 265 PEKDLQDVLKCCLKRDPKQRISI 287
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 466 RASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 525
+ + +++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV
Sbjct: 82 KLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV 140
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPE 581
HQ I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE
Sbjct: 141 HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 26/284 (9%)
Query: 47 KYKLLKTIGKGNFAKVK---LAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD 103
++ L + +GKG F V+ L + + +VA+K++ + +++ RE MK D
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 104 HPNIVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGRMKEK------EARAKF 151
HP++ KL V + +++ + G++ +L L R+ E + +F
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL-LASRIGENPFNLPLQTLVRF 142
Query: 152 R-QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP-- 208
I ++Y + IHRDL A N +L +M + +ADFG S + G+ C S
Sbjct: 143 MVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLP 202
Query: 209 -PYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIP 265
+ A E Y DVW+ GV ++ +++ G P+ G E+ ++ G + + P
Sbjct: 203 VKWLALESLADNLYT-VHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQP 261
Query: 266 FYMSTDCENLLKKFLVLNPAKRAS---LEVSGEVTLGGAPVTSS 306
+ +L+ + +P +R S L + E LG V S+
Sbjct: 262 PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST 305
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 521 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGS 574
I ++Y + IHRDL A N +L +M + +ADFG S + G+ C S
Sbjct: 146 IACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD 103
++ ++ ++ +G+G F V AK+ AIK I + + +K+ REV+ + L+
Sbjct: 3 YLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELAREKVMREVKALAKLE 61
Query: 104 HPNIVKLFQVI----ETEKT--------LYLVMEYASGGEVFDYLVLHGRMKEKEARAK- 150
HP IV+ F TEK LY+ M+ + D++ ++E+E
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 151 --FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF---- 204
F QI AV++ H K ++HRDLK N+ + +K+ DFG + T
Sbjct: 122 HIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 205 ---------CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 239
G+ Y +PE G Y +VD++SLG+IL+ L+
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSH-KVDIFSLGLILFELL 224
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAK---FRQIVSAVQYCHQKKIIHRDLKAENL 543
LY+ M+ + D++ ++E+E F QI AV++ H K ++HRDLK N+
Sbjct: 90 LYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNI 149
Query: 544 LLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGA--GTNHTH 601
+ +K+ DFG + T P A Q G + S G +++H
Sbjct: 150 FFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSH 209
Query: 602 NSSI 605
I
Sbjct: 210 KVDI 213
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEV-AIKIIDKTQLNPGSLQKLFREVRIM-KMLDHP 105
Y +LK IG G +KV + + K++ AIK ++ + + +L E+ + K+ H
Sbjct: 14 YSILKQIGSGGSSKV--FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 71
Query: 106 N-IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
+ I++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ
Sbjct: 72 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 130
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ---G 218
I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE +
Sbjct: 131 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 189
Query: 219 KKYDGPEV-------DVWSLGVILYTLVSGSLPFDGSTLRELRE--RVLRGKYRIPF--Y 267
+ +G DVWSLG ILY + G PF + ++ + ++ + I F
Sbjct: 190 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-QIINQISKLHAIIDPNHEIEFPDI 248
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
D +++LK L +P +R S+
Sbjct: 249 PEKDLQDVLKCCLKRDPKQRISI 271
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 466 RASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 525
+ + +++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV
Sbjct: 66 KLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV 124
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPE 581
HQ I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE
Sbjct: 125 HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 76 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 195 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 239
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 90 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 545 LDSEMNIKIADFG 557
+ + ++KI DFG
Sbjct: 150 VKTPQHVKITDFG 162
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNI+ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 163 QKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
I+HRD+K N+++D E +++ D+G + + PG + + S + PEL +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPF 232
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ Y
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 528 CHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH I+HRD+K N+++D E +++ D+G + + PG + + S + PEL
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 203
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNI+ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 163 QKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
I+HRD+K N+++D E +++ D+G + + PG + + S + PEL +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPF 232
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ Y
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 528 CHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH I+HRD+K N+++D E +++ D+G + + PG + + S + PEL
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 203
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII------DKTQLNPGSLQKLFREVRIMK 100
+Y+ + IG G + V A+ +G VA+K + P S + +R ++
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 101 MLDHPNIVKLFQVIETEKT-----LYLVMEYASGGEVFDYL--VLHGRMKEKEARAKFRQ 153
+HPN+V+L V T +T + LV E+ ++ YL + + + RQ
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 128
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ + + H I+HRDLK EN+L+ S +K+ADFG + ++ L + Y AP
Sbjct: 129 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAP 188
Query: 214 ELFQGKKYDGPEVDVWSLGVIL 235
E+ Y P VD+WS+G I
Sbjct: 189 EVLLQSTYATP-VDMWSVGCIF 209
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPY 577
RQ + + + H I+HRDLK EN+L+ S +K+ADFG + ++ L + Y
Sbjct: 126 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWY 185
Query: 578 AAPELF 583
APE+
Sbjct: 186 RAPEVL 191
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIID---KTQLNPGSLQKLFREVRIMKMLD 103
++K +K +G G F V +P G++V I + + +P + +++ E +M +D
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 110 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 168
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 169 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 228
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 229 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 273
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 124 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 183
Query: 545 LDSEMNIKIADFGFSN 560
+ + ++KI DFG +
Sbjct: 184 VKTPQHVKITDFGLAK 199
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 49 KLLKTIGKGNFAKV---KLAKHVP--TGKEVAIKII-DKTQLNPGSLQKLFR-EVRIMKM 101
+ ++ +G+ F KV L P + VAIK + DK + G L++ FR E +
Sbjct: 12 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE---GPLREEFRHEAMLRAR 68
Query: 102 LDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--------- 152
L HPN+V L V+ ++ L ++ Y S G++ ++LV+ + + R
Sbjct: 69 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128
Query: 153 -------QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFC 205
QI + ++Y ++H+DL N+L+ ++N+KI+D G E +
Sbjct: 129 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 206 GS---PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGSTLRELRERVLRGK 261
S + APE K+ + D+WS GV+L+ + S L P+ G + +++ E ++R +
Sbjct: 189 NSLLPIRWMAPEAIMYGKF-SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE-MIRNR 246
Query: 262 YRIPFYMSTDCENLLKKFLV 281
+P DC + ++
Sbjct: 247 QVLP--CPDDCPAWVYALMI 264
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 16/112 (14%)
Query: 466 RASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR------ 519
RA ++ L V+ ++ L ++ Y S G++ ++LV+ + + R
Sbjct: 66 RARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 125
Query: 520 ----------QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
QI + ++Y ++H+DL N+L+ ++N+KI+D G E
Sbjct: 126 EPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 20/166 (12%)
Query: 94 REVRIMKMLDHPNIVKLFQVI--ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKE----- 146
RE+ +++ L HPN++ L +V ++ ++L+ +YA +++ + H K +
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQL 125
Query: 147 ----ARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE----MNIKIADFGFSNEFT-- 196
++ QI+ + Y H ++HRDLK N+L+ E +KIAD GF+ F
Sbjct: 126 PRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 197 --PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
P LD + Y APEL G ++ +D+W++G I L++
Sbjct: 186 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 19/137 (13%)
Query: 473 TLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKE---------ARAKFRQIVS 523
+L K+F + ++ ++L+ +YA +++ + H K + ++ QI+
Sbjct: 82 SLQKVF-LSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD 139
Query: 524 AVQYCHQKKIIHRDLKAENLLLDSE----MNIKIADFGFSNEFT----PGNKLDTFCGSP 575
+ Y H ++HRDLK N+L+ E +KIAD GF+ F P LD +
Sbjct: 140 GIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF 199
Query: 576 PYAAPELFQGGAPVTSS 592
Y APEL G T +
Sbjct: 200 WYRAPELLLGARHYTKA 216
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNI+ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 163 QKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
I+HRD+K N+++D E +++ D+G + + PG + + S + PEL +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPF 232
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ Y
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 528 CHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH I+HRD+K N+++D E +++ D+G + + PG + + S + PEL
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 203
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNI+ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ YCH
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYCH 153
Query: 163 QKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
I+HRD+K N+++D E +++ D+G + + PG + + S + PEL +
Sbjct: 154 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 213
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 214 YDYSLDMWSLGCMLASMIFRKEPF 237
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ Y
Sbjct: 95 GGPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDY 151
Query: 528 CHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH I+HRD+K N+++D E +++ D+G + + PG + + S + PEL
Sbjct: 152 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 208
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEV-AIKIIDKTQLNPGSLQKLFREVRIM-KMLDHP 105
Y +LK IG G +KV + + K++ AIK ++ + + +L E+ + K+ H
Sbjct: 10 YSILKQIGSGGSSKV--FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 67
Query: 106 N-IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
+ I++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ
Sbjct: 68 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 126
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ---G 218
I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE +
Sbjct: 127 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 185
Query: 219 KKYDGPEV-------DVWSLGVILYTLVSGSLPFDGSTLRELRE--RVLRGKYRIPF--Y 267
+ +G DVWSLG ILY + G PF + ++ + ++ + I F
Sbjct: 186 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-QIINQISKLHAIIDPNHEIEFPDI 244
Query: 268 MSTDCENLLKKFLVLNPAKRASL 290
D +++LK L +P +R S+
Sbjct: 245 PEKDLQDVLKCCLKRDPKQRISI 267
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
+ +++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ
Sbjct: 68 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 126
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPE 581
I+H DLK N L+ M +K+ DFG +N+ P D+ G+ Y PE
Sbjct: 127 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 178
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNI+ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 163 QKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
I+HRD+K N+++D E +++ D+G + + PG + + S + PEL +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPF 232
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ Y
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 528 CHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH I+HRD+K N+++D E +++ D+G + + PG + + S + PEL
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 203
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNI+ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 163 QKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
I+HRD+K N+++D E +++ D+G + + PG + + S + PEL +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPF 232
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ Y
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 528 CHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH I+HRD+K N+++D E +++ D+G + + PG + + S + PEL
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 203
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNI+ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 163 QKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
I+HRD+K N+++D E +++ D+G + + PG + + S + PEL +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPF 232
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ Y
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 528 CHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH I+HRD+K N+++D E +++ D+G + + PG + + S + PEL
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 203
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNI+ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ YCH
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYCH 147
Query: 163 QKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
I+HRD+K N+++D E +++ D+G + + PG + + S + PEL +
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 207
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPF 231
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ Y
Sbjct: 89 GGPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDY 145
Query: 528 CHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH I+HRD+K N+++D E +++ D+G + + PG + + S + PEL
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 202
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 90 QKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL---------HG 140
Q+ +E+++M H N+V+L L LV Y G + D L H
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 141 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF---SNEFTP 197
R K + A + + + H+ IHRD+K+ N+LLD KI+DFG S +F
Sbjct: 135 RCKIAQGAA------NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 198 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 244
G+ Y APE +G+ P+ D++S GV+L +++G LP
Sbjct: 189 TVMXSRIVGTTAYMAPEALRGEI--TPKSDIYSFGVVLLEIITG-LP 232
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 18/131 (13%)
Query: 467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVL---------HGRMKEKEARAK 517
A E L++L L LV Y G + D L H R K + A
Sbjct: 85 AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA- 143
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF---SNEFTPGNKLDTFCGS 574
+ + + H+ IHRD+K+ N+LLD KI+DFG S +F G+
Sbjct: 144 -----NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGT 198
Query: 575 PPYAAPELFQG 585
Y APE +G
Sbjct: 199 TAYMAPEALRG 209
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNI+ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 163 QKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
I+HRD+K N+++D E +++ D+G + + PG + + S + PEL +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPF 232
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ Y
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 528 CHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH I+HRD+K N+++D E +++ D+G + + PG + + S + PEL
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 203
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 124/260 (47%), Gaps = 34/260 (13%)
Query: 49 KLLKTIGKGNFAKV---KLAKHVP--TGKEVAIKII-DKTQLNPGSLQKLFR-EVRIMKM 101
+ ++ +G+ F KV L P + VAIK + DK + G L++ FR E +
Sbjct: 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE---GPLREEFRHEAMLRAR 85
Query: 102 LDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL---HGRM----KEKEARAKFR-- 152
L HPN+V L V+ ++ L ++ Y S G++ ++LV+ H + ++ ++
Sbjct: 86 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 145
Query: 153 -------QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFC 205
QI + ++Y ++H+DL N+L+ ++N+KI+D G E +
Sbjct: 146 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 205
Query: 206 GS---PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGSTLRELRERVLRGK 261
S + APE K+ + D+WS GV+L+ + S L P+ G + +++ E ++R +
Sbjct: 206 NSLLPIRWMAPEAIMYGKF-SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE-MIRNR 263
Query: 262 YRIPFYMSTDCENLLKKFLV 281
+P DC + ++
Sbjct: 264 QVLP--CPDDCPAWVYALMI 281
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 54/112 (48%), Gaps = 16/112 (14%)
Query: 466 RASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVL---HGRM----KEKEARAKF 518
RA ++ L V+ ++ L ++ Y S G++ ++LV+ H + ++ ++
Sbjct: 83 RARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 142
Query: 519 R---------QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
QI + ++Y ++H+DL N+L+ ++N+KI+D G E
Sbjct: 143 EPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNI+ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ YCH
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYCH 147
Query: 163 QKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
I+HRD+K N+++D E +++ D+G + + PG + + S + PEL +
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 207
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPF 231
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ Y
Sbjct: 89 GGPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDY 145
Query: 528 CHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH I+HRD+K N+++D E +++ D+G + + PG + + S + PEL
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 202
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 111/227 (48%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K + G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 83 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 202 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 246
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 97 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 156
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 157 VKTPQHVKITDFGLA 171
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNI+ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 163 QKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
I+HRD+K N+++D E +++ D+G + + PG + + S + PEL +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPF 232
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ Y
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 528 CHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH I+HRD+K N+++D E +++ D+G + + PG + + S + PEL
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 203
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNI+ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ YCH
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYCH 146
Query: 163 QKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
I+HRD+K N+++D E +++ D+G + + PG + + S + PEL +
Sbjct: 147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 206
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 207 YDYSLDMWSLGCMLASMIFRKEPF 230
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++ L +++ +T LV E+ + D+ L+ + + + R +I+ A+ Y
Sbjct: 88 GGPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDY 144
Query: 528 CHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH I+HRD+K N+++D E +++ D+G + + PG + + S + PEL
Sbjct: 145 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 201
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 30/223 (13%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
+ ++++ + G+G F V+L K TG VAIK K +P + + ++ + +L H
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK---KVIQDPRFRNRELQIMQDLAVLHH 78
Query: 105 PNIVKLFQVIET-----EKTLYL--VMEYASGGEVFDYLVLHGRMKEKEAR--------- 148
PNIV+L T + +YL VMEY LH + R
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-------TLHRCCRNYYRRQVAPPPILI 131
Query: 149 -AKFRQIVSAVQYCH--QKKIIHRDLKAENLLL-DSEMNIKIADFGFSNEFTPGNKLDTF 204
Q++ ++ H + HRD+K N+L+ +++ +K+ DFG + + +P +
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY 191
Query: 205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
S Y APEL G ++ VD+WS+G I ++ G F G
Sbjct: 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRG 234
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 533 IIHRDLKAENLLL-DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTS 591
+ HRD+K N+L+ +++ +K+ DFG + + +P + S Y APEL G T+
Sbjct: 152 VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTT 211
Query: 592 S 592
+
Sbjct: 212 A 212
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 90 QKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL---------HG 140
Q+ +E+++M H N+V+L L LV Y G + D L H
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 141 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF---SNEFTP 197
R K + A + + + H+ IHRD+K+ N+LLD KI+DFG S +F
Sbjct: 135 RCKIAQGAA------NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 198 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 244
G+ Y APE +G+ P+ D++S GV+L +++G LP
Sbjct: 189 TVMXXRIVGTTAYMAPEALRGEI--TPKSDIYSFGVVLLEIITG-LP 232
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 18/131 (13%)
Query: 467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVL---------HGRMKEKEARAK 517
A E L++L L LV Y G + D L H R K + A
Sbjct: 85 AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA- 143
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF---SNEFTPGNKLDTFCGS 574
+ + + H+ IHRD+K+ N+LLD KI+DFG S +F G+
Sbjct: 144 -----NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGT 198
Query: 575 PPYAAPELFQG 585
Y APE +G
Sbjct: 199 TAYMAPEALRG 209
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 90 QKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL---------HG 140
Q+ +E+++M H N+V+L L LV Y G + D L H
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 141 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF---SNEFTP 197
R K + A + + + H+ IHRD+K+ N+LLD KI+DFG S +F
Sbjct: 129 RCKIAQGAA------NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 198 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 244
G+ Y APE +G+ P+ D++S GV+L +++G LP
Sbjct: 183 XVMXXRIVGTTAYMAPEALRGEI--TPKSDIYSFGVVLLEIITG-LP 226
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 18/131 (13%)
Query: 467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVL---------HGRMKEKEARAK 517
A E L++L L LV Y G + D L H R K + A
Sbjct: 79 AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA- 137
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF---SNEFTPGNKLDTFCGS 574
+ + + H+ IHRD+K+ N+LLD KI+DFG S +F G+
Sbjct: 138 -----NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGT 192
Query: 575 PPYAAPELFQG 585
Y APE +G
Sbjct: 193 TAYMAPEALRG 203
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 37/230 (16%)
Query: 52 KTIGKGNFAKV--KLAKHVPTGKE----VAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
KT+G+G F KV A H+ G+ VA+K++ K +P L+ L E ++K ++HP
Sbjct: 29 KTLGEGEFGKVVKATAFHL-KGRAGYTTVAVKML-KENASPSELRDLLSEFNVLKQVNHP 86
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL----------------VLHGRMKEKEARA 149
+++KL+ + L L++EYA G + +L + + RA
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 150 KFR--------QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNK 200
QI +QY + ++HRDL A N+L+ +KI+DFG S + + +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 201 LDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG 247
+ G P + A E Y + DVWS GV+L+ +V+ G P+ G
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIVTLGGNPYPG 255
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
QI +QY + ++HRDL A N+L+ +KI+DFG S +
Sbjct: 158 QISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRD 199
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 111/227 (48%), Gaps = 11/227 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT---QLNPGSLQKLFREVRIMKMLD 103
++K +K + G F V +P G++V I + K +P + +++ E +M +D
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCH 162
+P++ +L + T T+ L+ + G + DY+ H + + QI + Y
Sbjct: 76 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPP--YAAPELFQGK 219
++++HRDL A N+L+ + ++KI DFG + K G P + A E +
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y + DVWS GV ++ L++ GS P+DG E+ + +G+ R+P
Sbjct: 195 IYTH-QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLP 239
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ L+ + G + DY+ H + + QI + Y ++++HRDL A N+L
Sbjct: 90 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 545 LDSEMNIKIADFGFS 559
+ + ++KI DFG +
Sbjct: 150 VKTPQHVKITDFGLA 164
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 128/260 (49%), Gaps = 19/260 (7%)
Query: 52 KTIGKGNFAKVKLAKHVPTGK---EVAIKIIDK-TQLNPGSLQKLFREVRIMKMLDHPNI 107
+ IGKG+F V +++ + + AIK + + T++ ++ RE +M+ L+HPN+
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQ--QVEAFLREGLLMRGLNHPNV 84
Query: 108 VKLFQVIETEKTL-YLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 165
+ L ++ + L ++++ Y G++ ++ R + F Q+ ++Y ++K
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTPGNKLDTFCGSPPYAAPELFQGKK 220
+HRDL A N +LD +K+ADFG + E+ + + A E Q +
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR 204
Query: 221 YDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPF--YMSTDCENLLK 277
+ + DVWS GV+L+ L++ G+ P+ +L + +G+ R+P Y +++
Sbjct: 205 FTT-KSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR-RLPQPEYCPDSLYQVMQ 262
Query: 278 KFLVLNPAKRASLEV-SGEV 296
+ +PA R + V GEV
Sbjct: 263 QCWEADPAVRPTFRVLVGEV 282
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
Q+ ++Y ++K +HRDL A N +LD +K+ADFG + +
Sbjct: 132 QVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 105 PNIVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
PNI+ L +++ +T LV E+ + D+ L + + + R +I+ A+ YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLRQTLTDYDIRFYMYEILKALDYCH 148
Query: 163 QKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
I+HRD+K N+++D E +++ D+G + + PG + + S + PEL +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 222 DGPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPF 232
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++ L +++ +T LV E+ + D+ L + + + R +I+ A+ Y
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLRQTLTDYDIRFYMYEILKALDY 146
Query: 528 CHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH I+HRD+K N+++D E +++ D+G + + PG + + S + PEL
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 203
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 106 NIVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
NI+KL ++ KT LV EY + D+ L+ + + + R +++ A+ YCH
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNT---DFKQLYQILTDFDIRFYMYELLKALDYCHS 150
Query: 164 KKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
K I+HRD+K N+++D + +++ D+G + + P + + S + PEL +
Sbjct: 151 KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMY 210
Query: 223 GPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 211 DYSLDMWSLGCMLASMIFRREPF 233
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++KL ++ KT LV EY + D+ L+ + + + R +++ A+ Y
Sbjct: 91 GGTNIIKLIDTVKDPVSKTPALVFEYINNT---DFKQLYQILTDFDIRFYMYELLKALDY 147
Query: 528 CHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH K I+HRD+K N+++D + +++ D+G + + P + + S + PEL
Sbjct: 148 CHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELL 204
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 23/240 (9%)
Query: 44 HIGKYKLL--KTIGKGNFAKVKLAKH---VPTGKEVAIKIIDKTQLNPGSLQKLFREVRI 98
HI ++ ++ + +G+G F KV LA+ P ++ + + + + + RE +
Sbjct: 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL 68
Query: 99 MKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-------------RMKEK 145
+ L H +IVK + V L +V EY G++ +L HG + +
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 146 EARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF--TPGNKLDT 203
+ +QI + + Y + +HRDL N L+ + +KI DFG S + T ++
Sbjct: 129 QMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGG 188
Query: 204 FCGSPP-YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
P + PE +K+ E DVWSLGV+L+ + + G P+ + E+ E + +G+
Sbjct: 189 HTMLPIRWMPPESIMYRKFT-TESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR 247
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-------------RMKEKEARAKF 518
E ++K + V L +V EY G++ +L HG + + +
Sbjct: 75 EHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIA 134
Query: 519 RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
+QI + + Y + +HRDL N L+ + +KI DFG S +
Sbjct: 135 QQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRD 177
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 21/167 (12%)
Query: 90 QKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL---------HG 140
Q+ +E+++ H N+V+L L LV Y G + D L H
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 141 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF---SNEFTP 197
R K + A + + + H+ IHRD+K+ N+LLD KI+DFG S +F
Sbjct: 126 RCKIAQGAA------NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 198 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 244
G+ Y APE +G+ P+ D++S GV+L +++G LP
Sbjct: 180 XVXXSRIVGTTAYXAPEALRGEI--TPKSDIYSFGVVLLEIITG-LP 223
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 18/131 (13%)
Query: 467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVL---------HGRMKEKEARAK 517
A E L++L L LV Y G + D L H R K + A
Sbjct: 76 AKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAA- 134
Query: 518 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF---SNEFTPGNKLDTFCGS 574
+ + + H+ IHRD+K+ N+LLD KI+DFG S +F G+
Sbjct: 135 -----NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGT 189
Query: 575 PPYAAPELFQG 585
Y APE +G
Sbjct: 190 TAYXAPEALRG 200
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 106 NIVKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
NI+KL ++ KT LV EY + D+ L+ + + + R +++ A+ YCH
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNT---DFKQLYQILTDFDIRFYMYELLKALDYCHS 155
Query: 164 KKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
K I+HRD+K N+++D + +++ D+G + + P + + S + PEL +
Sbjct: 156 KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMY 215
Query: 223 GPEVDVWSLGVILYTLVSGSLPF 245
+D+WSLG +L +++ PF
Sbjct: 216 DYSLDMWSLGCMLASMIFRREPF 238
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 470 GGETLLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 527
GG ++KL ++ KT LV EY + D+ L+ + + + R +++ A+ Y
Sbjct: 96 GGTNIIKLIDTVKDPVSKTPALVFEYINNT---DFKQLYQILTDFDIRFYMYELLKALDY 152
Query: 528 CHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
CH K I+HRD+K N+++D + +++ D+G + + P + + S + PEL
Sbjct: 153 CHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELL 209
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 6/246 (2%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREV-RIMKMLDHPN 106
++ L +G G++ +V + G+ A+K P + EV K+ HP
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
V+L Q E LYL E + E + R + A+ + H + +
Sbjct: 119 CVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGL 178
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
+H D+K N+ L K+ DFG E + G P Y APEL QG G
Sbjct: 179 VHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSY--GTAA 236
Query: 227 DVWSLGV-ILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPA 285
DV+SLG+ IL + LP G ++LR+ L ++ +S++ ++L L +P
Sbjct: 237 DVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAG--LSSELRSVLVMMLEPDPK 294
Query: 286 KRASLE 291
RA+ E
Sbjct: 295 LRATAE 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 44/113 (38%)
Query: 473 TLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 532
++L Q E LYL E + E + R + A+ + H +
Sbjct: 118 CCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG 177
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
++H D+K N+ L K+ DFG E + G P Y APEL QG
Sbjct: 178 LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG 230
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 38/271 (14%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE-----VAIKIIDKTQLNPGSLQKLFREVRIMKML-DHP 105
KT+G G F KV A GKE VA+K++ K+ + + L E++IM L H
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHE 110
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKE-------ARAKFR------ 152
NIV L + ++ EY G++ ++L R+ E + + A R
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 153 -QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF-------SNEFTPGN-KLDT 203
Q+ + + K IHRD+ A N+LL + KI DFG SN GN +L
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGSTLRELRERVLRGKY 262
+ APE Y + DVWS G++L+ + S L P+ G + ++++ Y
Sbjct: 231 -----KWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY 284
Query: 263 RI--PFYMSTDCENLLKKFLVLNPAKRASLE 291
++ P + + ++++ L P R + +
Sbjct: 285 QMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 315
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 489 LVMEYASGGEVFDYLVLHGRMKEKE-------ARAKFR-------QIVSAVQYCHQKKII 534
++ EY G++ ++L R+ E + + A R Q+ + + K I
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCI 186
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNE 561
HRD+ A N+LL + KI DFG + +
Sbjct: 187 HRDVAARNVLLTNGHVAKIGDFGLARD 213
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 113/224 (50%), Gaps = 13/224 (5%)
Query: 51 LKTIGKGNFAKVKLAKHVPTGKEV----AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+K +G G F V +P G+ V AIK++ + +P + +++ E +M + P
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVL-RENTSPKANKEILDEAYVMAGVGSPY 80
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 165
+ +L + T T+ LV + G + D++ + GR+ ++ QI + Y +
Sbjct: 81 VSRLLGICLT-STVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR 139
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPP--YAAPELFQGKKYD 222
++HRDL A N+L+ S ++KI DFG + + G P + A E +++
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFT 199
Query: 223 GPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ DVWS GV ++ L++ G+ P+DG RE+ + + +G+ R+P
Sbjct: 200 H-QSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE-RLP 241
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 486 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
T+ LV + G + D++ + GR+ ++ QI + Y +++HRDL A N+L
Sbjct: 92 TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVL 151
Query: 545 LDSEMNIKIADFGFS 559
+ S ++KI DFG +
Sbjct: 152 VKSPNHVKITDFGLA 166
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 33/223 (14%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y + IG+G++ V LA T K VAIK +++ + +++ RE+ I+ L I
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 87
Query: 108 VKLFQVIETEKTL-----YLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++L+ +I + L Y+V+E A ++F + + E+ + ++ +
Sbjct: 88 IRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF---LTEEHIKTILYNLLLGENF 144
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT------------------PGNK-- 200
H+ IIHRDLK N LL+ + ++K+ DFG + P NK
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 201 ---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
L + + Y APEL ++ +D+WS G I L++
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 487 LYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
LY+V+E A ++F + + E+ + ++ + H+ IIHRDLK N L
Sbjct: 105 LYIVLEIADSDLKKLFKTPIF---LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCL 161
Query: 545 LDSEMNIKIADFGFS 559
L+ + ++K+ DFG +
Sbjct: 162 LNQDCSVKVCDFGLA 176
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y++ IG G++ V A + VAIK I + + +++ RE+ I+ L+H +
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDH 113
Query: 107 IVKLFQVI---ETEK--TLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQ 159
+VK+ ++ + EK LY+V+E A ++F V + E + ++ V+
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVY---LTELHIKTLLYNLLVGVK 170
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPP--------- 209
Y H I+HRDLK N L++ + ++K+ DFG + P N SP
Sbjct: 171 YVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTF 230
Query: 210 ------------------YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
Y APEL ++ +DVWS+G I L++
Sbjct: 231 PHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 481 IETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDL 538
+E LY+V+E A ++F V + E + ++ V+Y H I+HRDL
Sbjct: 126 VEKFDELYVVLEIADSDFKKLFRTPVY---LTELHIKTLLYNLLVGVKYVHSAGILHRDL 182
Query: 539 KAENLLLDSEMNIKIADFGFS 559
K N L++ + ++K+ DFG +
Sbjct: 183 KPANCLVNQDCSVKVCDFGLA 203
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 38/271 (14%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE-----VAIKIIDKTQLNPGSLQKLFREVRIMKML-DHP 105
KT+G G F KV A GKE VA+K++ K+ + + L E++IM L H
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHE 110
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-------------- 151
NIV L + ++ EY G++ ++L R+ E +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 152 RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF-------SNEFTPGN-KLDT 203
Q+ + + K IHRD+ A N+LL + KI DFG SN GN +L
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGSTLRELRERVLRGKY 262
+ APE Y + DVWS G++L+ + S L P+ G + ++++ Y
Sbjct: 231 -----KWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY 284
Query: 263 RI--PFYMSTDCENLLKKFLVLNPAKRASLE 291
++ P + + ++++ L P R + +
Sbjct: 285 QMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 315
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 14/87 (16%)
Query: 489 LVMEYASGGEVFDYLVLHGRMKEKEARAKF--------------RQIVSAVQYCHQKKII 534
++ EY G++ ++L R+ E + Q+ + + K I
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCI 186
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNE 561
HRD+ A N+LL + KI DFG + +
Sbjct: 187 HRDVAARNVLLTNGHVAKIGDFGLARD 213
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 36/226 (15%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y++ IG+G++ V LA K VAIK +++ + +++ RE+ I+ L I
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 89
Query: 108 VKLFQVIETEKTL-----YLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
++L +I E L Y+V+E A ++F + + E+ + ++ ++
Sbjct: 90 IRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF---LTEQHVKTILYNLLLGEKF 146
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT---------------------PGN 199
H+ IIHRDLK N LL+ + ++KI DFG + P N
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 200 K-----LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 240
K L + + Y APEL ++ +D+WS G I L++
Sbjct: 207 KNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 487 LYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
LY+V+E A ++F + + E+ + ++ ++ H+ IIHRDLK N L
Sbjct: 107 LYIVLEIADSDLKKLFKTPIF---LTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCL 163
Query: 545 LDSEMNIKIADFGFS 559
L+ + ++KI DFG +
Sbjct: 164 LNQDCSVKICDFGLA 178
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 23/226 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ ++Y KK
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 172
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEF----------TPGNKLDTFCGSPPYAAPELF 216
+HRDL A N +LD + +K+ADFG + + G KL + A E
Sbjct: 173 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KWMALESL 227
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
Q +K+ + DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 228 QTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 272
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ ++Y KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 159 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 200
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 23/226 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ ++Y KK
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 153
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEF----------TPGNKLDTFCGSPPYAAPELF 216
+HRDL A N +LD + +K+ADFG + + G KL + A E
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV-----KWMALESL 208
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
Q +K+ + DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 209 QTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 253
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ ++Y KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 181
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 23/226 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ ++Y KK
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 154
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEF----------TPGNKLDTFCGSPPYAAPELF 216
+HRDL A N +LD + +K+ADFG + + G KL + A E
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KWMALESL 209
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
Q +K+ + DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 210 QTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ ++Y KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 182
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 23/226 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ ++Y KK
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 173
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEF----------TPGNKLDTFCGSPPYAAPELF 216
+HRDL A N +LD + +K+ADFG + + G KL + A E
Sbjct: 174 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KWMALESL 228
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
Q +K+ + DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 229 QTQKFTT-KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 273
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ ++Y KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 160 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 201
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 24/222 (10%)
Query: 42 EPHIG-KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
EP +G K++L + IG G+F ++ L ++ T +EVAIK+ + +P +L E +I +
Sbjct: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLLYESKIYR 57
Query: 101 MLDH----PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
+L PN V+ F V L + + S ++F++ +K A Q+++
Sbjct: 58 ILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAD--QMIN 114
Query: 157 AVQYCHQKKIIHRDLKAENLLLD---SEMNIKIADFGFSNEF--------TPGNKLDTFC 205
V++ H K +HRD+K +N L+ + I DFG + ++ P +
Sbjct: 115 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLT 174
Query: 206 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 247
G+ YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 175 GTARYASVNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 215
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLD---SEMNIKIADFGFSNEF 562
Q+++ V++ H K +HRD+K +N L+ + I DFG + ++
Sbjct: 111 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 23/226 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ ++Y KK
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 146
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEF----------TPGNKLDTFCGSPPYAAPELF 216
+HRDL A N +LD + +K+ADFG + + G KL + A E
Sbjct: 147 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KWMALESL 201
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
Q +K+ + DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 202 QTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 246
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ ++Y KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 133 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 174
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 117/267 (43%), Gaps = 34/267 (12%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE-----VAIKIIDKTQLNPGSLQKLFREVRIMKML-DHP 105
KT+G G F KV A GKE VA+K++ K+ + + L E++IM L H
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHE 102
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH---------GRMKEKEARAKFR-QIV 155
NIV L + ++ EY G++ ++L GR E F Q+
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF-------SNEFTPGN-KLDTFCGS 207
+ + K IHRD+ A N+LL + KI DFG SN GN +L
Sbjct: 163 QGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV---- 218
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGSTLRELRERVLRGKYRI-- 264
+ APE Y + DVWS G++L+ + S L P+ G + ++++ Y++
Sbjct: 219 -KWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ 276
Query: 265 PFYMSTDCENLLKKFLVLNPAKRASLE 291
P + + ++++ L P R + +
Sbjct: 277 PAFAPKNIYSIMQACWALEPTHRPTFQ 303
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 489 LVMEYASGGEVFDYLVLH---------GRMKEKEARAKFR-QIVSAVQYCHQKKIIHRDL 538
++ EY G++ ++L GR E F Q+ + + K IHRD+
Sbjct: 119 VITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDV 178
Query: 539 KAENLLLDSEMNIKIADFGFSNE 561
A N+LL + KI DFG + +
Sbjct: 179 AARNVLLTNGHVAKIGDFGLARD 201
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 23/226 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ ++Y KK
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 152
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEF----------TPGNKLDTFCGSPPYAAPELF 216
+HRDL A N +LD + +K+ADFG + + G KL + A E
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KWMALESL 207
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
Q +K+ + DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 208 QTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 252
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ ++Y KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 139 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 180
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 113/223 (50%), Gaps = 17/223 (7%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ ++Y KK
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 154
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNE------FTPGNKLDTFCGSP-PYAAPELFQGK 219
+HRDL A N +LD + +K+ADFG + + ++ NK T P + A E Q +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK--TGAKLPVKWMALESLQTQ 212
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
K+ DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 213 KFTTKS-DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ ++Y KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 182
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 23/226 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ +++ KK
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 213
Query: 167 IHRDLKAENLLLDSEMNIKIADFG-----FSNEFTP-----GNKLDTFCGSPPYAAPELF 216
+HRDL A N +LD + +K+ADFG + EF G KL + A E
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-----KWMALESL 268
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
Q +K+ + DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 269 QTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ +++ KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 200 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 241
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 113/223 (50%), Gaps = 17/223 (7%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ ++Y KK
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 153
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNE------FTPGNKLDTFCGSP-PYAAPELFQGK 219
+HRDL A N +LD + +K+ADFG + + ++ NK T P + A E Q +
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK--TGAKLPVKWMALESLQTQ 211
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
K+ DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 212 KFTTKS-DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 253
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ ++Y KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 181
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 23/226 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ ++Y KK
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 151
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEF----------TPGNKLDTFCGSPPYAAPELF 216
+HRDL A N +LD + +K+ADFG + + G KL + A E
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KWMALESL 206
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
Q +K+ + DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 207 QTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 251
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ ++Y KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 138 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 179
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 23/226 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ ++Y KK
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 149
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEF----------TPGNKLDTFCGSPPYAAPELF 216
+HRDL A N +LD + +K+ADFG + + G KL + A E
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KWMALESL 204
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
Q +K+ + DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 205 QTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 249
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ ++Y KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 136 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 177
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 23/226 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ +++ KK
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 154
Query: 167 IHRDLKAENLLLDSEMNIKIADFG-----FSNEFTP-----GNKLDTFCGSPPYAAPELF 216
+HRDL A N +LD + +K+ADFG + EF G KL + A E
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-----KWMALESL 209
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
Q +K+ + DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 210 QTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ +++ KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 141 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 182
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 23/226 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ +++ KK
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 159
Query: 167 IHRDLKAENLLLDSEMNIKIADFG-----FSNEFTP-----GNKLDTFCGSPPYAAPELF 216
+HRDL A N +LD + +K+ADFG + EF G KL + A E
Sbjct: 160 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-----KWMALESL 214
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
Q +K+ + DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 215 QTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 259
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ +++ KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 146 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 187
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 23/226 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ +++ KK
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 155
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFT----------PGNKLDTFCGSPPYAAPELF 216
+HRDL A N +LD + +K+ADFG + + G KL + A E
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV-----KWMALESL 210
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
Q +K+ + DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 211 QTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 255
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ +++ KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 142 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 183
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 10/201 (4%)
Query: 52 KTIGKGNFAKVK---LAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ +G+G F +V H VA+K K + +K E IMK LDHP+IV
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTC-KKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKII 167
KL +IE E T +++ME GE+ YL + +K QI A+ Y +
Sbjct: 89 KLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 147
Query: 168 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKYDGPE 225
HRD+ N+L+ S +K+ DFG S + P + +PE +++
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTAS 207
Query: 226 VDVWSLGVILYTLVS-GSLPF 245
DVW V ++ ++S G PF
Sbjct: 208 -DVWMFAVCMWEILSFGKQPF 227
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
++KL +IE E T +++ME GE+ YL + +K QI A+ Y
Sbjct: 87 IVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN 145
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRD+ N+L+ S +K+ DFG S
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLS 172
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 117/267 (43%), Gaps = 34/267 (12%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE-----VAIKIIDKTQLNPGSLQKLFREVRIMKML-DHP 105
KT+G G F KV A GKE VA+K++ K+ + + L E++IM L H
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHE 110
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH---------GRMKEKEARAKFR-QIV 155
NIV L + ++ EY G++ ++L GR E F Q+
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF-------SNEFTPGN-KLDTFCGS 207
+ + K IHRD+ A N+LL + KI DFG SN GN +L
Sbjct: 171 QGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV---- 226
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGSTLRELRERVLRGKYRI-- 264
+ APE Y + DVWS G++L+ + S L P+ G + ++++ Y++
Sbjct: 227 -KWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ 284
Query: 265 PFYMSTDCENLLKKFLVLNPAKRASLE 291
P + + ++++ L P R + +
Sbjct: 285 PAFAPKNIYSIMQACWALEPTHRPTFQ 311
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 489 LVMEYASGGEVFDYLVLH---------GRMKEKEARAKFR-QIVSAVQYCHQKKIIHRDL 538
++ EY G++ ++L GR E F Q+ + + K IHRD+
Sbjct: 127 VITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDV 186
Query: 539 KAENLLLDSEMNIKIADFGFSNE 561
A N+LL + KI DFG + +
Sbjct: 187 AARNVLLTNGHVAKIGDFGLARD 209
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 23/226 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ +++ KK
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 155
Query: 167 IHRDLKAENLLLDSEMNIKIADFG-----FSNEFTP-----GNKLDTFCGSPPYAAPELF 216
+HRDL A N +LD + +K+ADFG + EF G KL + A E
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-----KWMALESL 210
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
Q +K+ + DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 211 QTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 255
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ +++ KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 142 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 183
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 23/226 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ +++ KK
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 154
Query: 167 IHRDLKAENLLLDSEMNIKIADFG-----FSNEFTP-----GNKLDTFCGSPPYAAPELF 216
+HRDL A N +LD + +K+ADFG + EF G KL + A E
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-----KWMALESL 209
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
Q +K+ + DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 210 QTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ +++ KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 141 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 182
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 10/201 (4%)
Query: 52 KTIGKGNFAKVK---LAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ +G+G F +V H VA+K K + +K E IMK LDHP+IV
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTC-KKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKII 167
KL +IE E T +++ME GE+ YL + +K QI A+ Y +
Sbjct: 77 KLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 135
Query: 168 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKYDGPE 225
HRD+ N+L+ S +K+ DFG S + P + +PE +++
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTAS 195
Query: 226 VDVWSLGVILYTLVS-GSLPF 245
DVW V ++ ++S G PF
Sbjct: 196 -DVWMFAVCMWEILSFGKQPF 215
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
++KL +IE E T +++ME GE+ YL + +K QI A+ Y
Sbjct: 75 IVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN 133
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRD+ N+L+ S +K+ DFG S
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLS 160
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 111/226 (49%), Gaps = 23/226 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPT-GKEV--AIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ IG+G+F V + GK++ A+K +++ + G + + E IMK HPN++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 109 KLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKI 166
L + + +E + +V+ Y G++ +++ + F Q+ +++ KK
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 152
Query: 167 IHRDLKAENLLLDSEMNIKIADFG-----FSNEFTP-----GNKLDTFCGSPPYAAPELF 216
+HRDL A N +LD + +K+ADFG + EF G KL + A E
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-----KWMALESL 207
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
Q +K+ DVWS GV+L+ L++ G+ P+ ++ +L+G+
Sbjct: 208 QTQKFTTKS-DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 252
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ +++ KK +HRDL A N +LD + +K+ADFG + +
Sbjct: 139 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 180
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 10/201 (4%)
Query: 52 KTIGKGNFAKVK---LAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ +G+G F +V H VA+K K + +K E IMK LDHP+IV
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTC-KKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKII 167
KL +IE E T +++ME GE+ YL + +K QI A+ Y +
Sbjct: 73 KLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 131
Query: 168 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--YAAPELFQGKKYDGPE 225
HRD+ N+L+ S +K+ DFG S + P + +PE +++
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTAS 191
Query: 226 VDVWSLGVILYTLVS-GSLPF 245
DVW V ++ ++S G PF
Sbjct: 192 -DVWMFAVCMWEILSFGKQPF 211
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
++KL +IE E T +++ME GE+ YL + +K QI A+ Y
Sbjct: 71 IVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN 129
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRD+ N+L+ S +K+ DFG S
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLS 156
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 49/280 (17%)
Query: 52 KTIGKGNFAKVKLAKHVPTGK-----EVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHP 105
K +G G F KV A K +VA+K++ K + + + L E+++M L H
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKML-KEKADSSEREALMSELKMMTQLGSHE 109
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL--------------HGRMKEKEARAKF 151
NIV L +YL+ EY G++ +YL R++E+E
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 152 ---------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF-------SNEF 195
Q+ +++ K +HRDL A N+L+ +KI DFG SN
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 196 TPGN-KLDTFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRE 252
GN +L + APE LF+G + DVWS G++L+ + S G P+ G +
Sbjct: 230 VRGNARLPV-----KWMAPESLFEGIY--TIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 282
Query: 253 LRERVLRGKYRI--PFYMSTDCENLLKKFLVLNPAKRASL 290
++++ +++ PFY + + +++ + KR S
Sbjct: 283 NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSF 322
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 40/158 (25%)
Query: 487 LYLVMEYASGGEVFDYLVL--------------HGRMKEKEARAKF---------RQIVS 523
+YL+ EY G++ +YL R++E+E Q+
Sbjct: 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK 183
Query: 524 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF-------SNEFTPGN-KLDTFCGSP 575
+++ K +HRDL A N+L+ +KI DFG SN GN +L
Sbjct: 184 GMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPV----- 238
Query: 576 PYAAPE-LFQGGAPVTS---SGGAGTNHTHNSSISPAP 609
+ APE LF+G + S S G + ++P P
Sbjct: 239 KWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 54 IGKGNFAKVKLAKH---VPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 110
+G+G F KV LA+ +P ++ + + + + + Q RE ++ ML H +IV+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLVLH---------------GRMKEKEARAKFRQIV 155
F V + L +V EY G++ +L H G + + A Q+
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF--TPGNKLDTFCGSP-PYAA 212
+ + Y +HRDL N L+ + +KI DFG S + T ++ P +
Sbjct: 169 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 228
Query: 213 PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF 245
PE +K+ E DVWS GV+L+ + + G P+
Sbjct: 229 PESILYRKFT-TESDVWSFGVVLWEIFTYGKQPW 261
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 15/106 (14%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR---------------MKEKEARA 516
+ +++ F V + L +V EY G++ +L HG + + A
Sbjct: 103 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 517 KFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
Q+ + + Y +HRDL N L+ + +KI DFG S +
Sbjct: 163 VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 208
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 31/212 (14%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII-DKTQLNPGSLQKLFREVRIMKML--- 102
+Y++LK IGKG+F +V A + VA+K++ ++ + + ++ E+RI++ L
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH----RQAAEEIRILEHLRKQ 153
Query: 103 DHPNIVKLFQVIET---EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARA-------KF- 151
D N + + ++E + + E S + L+ +K+ + + KF
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLS-------MNLYELIKKNKFQGFSLPLVRKFA 206
Query: 152 RQIVSAVQYCHQKKIIHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPP 209
I+ + H+ +IIH DLK EN+LL + IK+ DFG S ++ T S
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC--YEHQRVYTXIQSRF 264
Query: 210 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 241
Y APE+ G +Y P +D+WSLG IL L++G
Sbjct: 265 YRAPEVILGARYGMP-IDMWSLGCILAELLTG 295
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 521 IVSAVQYCHQKKIIHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPPYA 578
I+ + H+ +IIH DLK EN+LL + IK+ DFG S ++ T S Y
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC--YEHQRVYTXIQSRFYR 266
Query: 579 APELFQG---GAPV 589
APE+ G G P+
Sbjct: 267 APEVILGARYGMPI 280
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 110/237 (46%), Gaps = 28/237 (11%)
Query: 50 LLKTIGKGNFAKVKLAKHV---PTGKE--VAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
L + +G+G F KV LA+ PT + VA+K + L + + RE ++ L H
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL--AARKDFQREAELLTNLQH 76
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-------RMKEKEARAKF------ 151
+IVK + V L +V EY G++ +L HG + ++A+ +
Sbjct: 77 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 152 ---RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF--TPGNKLDTFCG 206
QI S + Y + +HRDL N L+ + + +KI DFG S + T ++
Sbjct: 137 HIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 207 SPP-YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
P + PE +K+ E DVWS GVIL+ + + G P+ + E+ E + +G+
Sbjct: 197 LPIRWMPPESIMYRKFT-TESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGR 252
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 16/106 (15%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-------RMKEKEARAKF------ 518
E ++K + V L +V EY G++ +L HG + ++A+ +
Sbjct: 77 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 519 ---RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
QI S + Y + +HRDL N L+ + + +KI DFG S +
Sbjct: 137 HIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRD 182
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 31/212 (14%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII-DKTQLNPGSLQKLFREVRIMKML--- 102
+Y++LK IGKG+F +V A + VA+K++ ++ + + + + E+RI++ L
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE----EIRILEHLRKQ 153
Query: 103 DHPNIVKLFQVIET---EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARA-------KF- 151
D N + + ++E + + E S + L+ +K+ + + KF
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLS-------MNLYELIKKNKFQGFSLPLVRKFA 206
Query: 152 RQIVSAVQYCHQKKIIHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPP 209
I+ + H+ +IIH DLK EN+LL + IK+ DFG S ++ T S
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC--YEHQRVYTXIQSRF 264
Query: 210 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 241
Y APE+ G +Y P +D+WSLG IL L++G
Sbjct: 265 YRAPEVILGARYGMP-IDMWSLGCILAELLTG 295
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 521 IVSAVQYCHQKKIIHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPPYA 578
I+ + H+ +IIH DLK EN+LL + IK+ DFG S ++ T S Y
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC--YEHQRVYTXIQSRFYR 266
Query: 579 APELFQG---GAPV 589
APE+ G G P+
Sbjct: 267 APEVILGARYGMPI 280
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 54 IGKGNFAKVKLAKH---VPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 110
+G+G F KV LA+ +P ++ + + + + + Q RE ++ ML H +IV+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLVLH---------------GRMKEKEARAKFRQIV 155
F V + L +V EY G++ +L H G + + A Q+
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF--TPGNKLDTFCGSP-PYAA 212
+ + Y +HRDL N L+ + +KI DFG S + T ++ P +
Sbjct: 140 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 199
Query: 213 PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF 245
PE +K+ E DVWS GV+L+ + + G P+
Sbjct: 200 PESILYRKFT-TESDVWSFGVVLWEIFTYGKQPW 232
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 15/106 (14%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR---------------MKEKEARA 516
+ +++ F V + L +V EY G++ +L HG + + A
Sbjct: 74 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 133
Query: 517 KFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
Q+ + + Y +HRDL N L+ + +KI DFG S +
Sbjct: 134 VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 179
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 40/273 (14%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE-----VAIKIIDKTQLNPGSLQKLFREVRIMKML-DHP 105
KT+G G F KV A GKE VA+K++ K+ + + L E++IM L H
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHE 110
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL-------------HGRMKEKEARAKFR 152
NIV L + ++ EY G++ ++L H ++ +R
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 153 ---QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF-------SNEFTPGN-KL 201
Q+ + + K IHRD+ A N+LL + KI DFG SN GN +L
Sbjct: 171 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGSTLRELRERVLRG 260
+ APE Y + DVWS G++L+ + S L P+ G + ++++
Sbjct: 231 PV-----KWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 284
Query: 261 KYRI--PFYMSTDCENLLKKFLVLNPAKRASLE 291
Y++ P + + ++++ L P R + +
Sbjct: 285 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 317
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ + + K IHRD+ A N+LL + KI DFG + +
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 215
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 54 IGKGNFAKVKLAKH---VPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 110
+G+G F KV LA+ +P ++ + + + + + Q RE ++ ML H +IV+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLVLH---------------GRMKEKEARAKFRQIV 155
F V + L +V EY G++ +L H G + + A Q+
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF--TPGNKLDTFCGSP-PYAA 212
+ + Y +HRDL N L+ + +KI DFG S + T ++ P +
Sbjct: 146 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 205
Query: 213 PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF 245
PE +K+ E DVWS GV+L+ + + G P+
Sbjct: 206 PESILYRKFT-TESDVWSFGVVLWEIFTYGKQPW 238
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 15/106 (14%)
Query: 472 ETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR---------------MKEKEARA 516
+ +++ F V + L +V EY G++ +L HG + + A
Sbjct: 80 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 139
Query: 517 KFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF 562
Q+ + + Y +HRDL N L+ + +KI DFG S +
Sbjct: 140 VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 185
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 53/236 (22%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQ-KLFREV------ 96
+Y L++ +G G+F+ V LAK + VA+KI+ DK + KL + V
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 97 --------RIMKMLDH-----PNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHGR 141
I+K+LDH PN V + V E E L L+ +Y G Y+
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYV----- 133
Query: 142 MKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAENLLL------DSEMNIKIADFG---- 190
+ +Q++ + Y H++ IIH D+K EN+L+ ++ + IKIAD G
Sbjct: 134 ------KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW 187
Query: 191 FSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 246
+ +T N + T Y +PE+ G + G D+WS +++ L++G F+
Sbjct: 188 YDEHYT--NSIQT----REYRSPEVLLGAPW-GCGADIWSTACLIFELITGDFLFE 236
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 27/157 (17%)
Query: 458 ASNAKPSRRASSGGETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVL---HGRMKEK 512
++A ++ S G +LKL + +++VM + GE L+ H +
Sbjct: 72 VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 131
Query: 513 EARAKFRQIVSAVQYCHQK-KIIHRDLKAENLLL------DSEMNIKIADFG----FSNE 561
+ +Q++ + Y H++ IIH D+K EN+L+ ++ + IKIAD G +
Sbjct: 132 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 562 FTPGNKLDTFCGSPPYAAPELFQG-----GAPVTSSG 593
+T N + T Y +PE+ G GA + S+
Sbjct: 192 YT--NSIQT----REYRSPEVLLGAPWGCGADIWSTA 222
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 53/236 (22%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQ-KLFREV------ 96
+Y L++ +G G+F+ V LAK + VA+KI+ DK + KL + V
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 97 --------RIMKMLDH-----PNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLHGR 141
I+K+LDH PN V + V E E L L+ +Y G Y+
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYV----- 133
Query: 142 MKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAENLLL------DSEMNIKIADFG---- 190
+ +Q++ + Y H++ IIH D+K EN+L+ ++ + IKIAD G
Sbjct: 134 ------KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW 187
Query: 191 FSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 246
+ +T N + T Y +PE+ G + G D+WS +++ L++G F+
Sbjct: 188 YDEHYT--NSIQT----REYRSPEVLLGAPW-GCGADIWSTACLIFELITGDFLFE 236
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 27/157 (17%)
Query: 458 ASNAKPSRRASSGGETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVL---HGRMKEK 512
++A ++ S G +LKL + +++VM + GE L+ H +
Sbjct: 72 VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 131
Query: 513 EARAKFRQIVSAVQYCHQK-KIIHRDLKAENLLL------DSEMNIKIADFG----FSNE 561
+ +Q++ + Y H++ IIH D+K EN+L+ ++ + IKIAD G +
Sbjct: 132 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 562 FTPGNKLDTFCGSPPYAAPELFQG-----GAPVTSSG 593
+T N + T Y +PE+ G GA + S+
Sbjct: 192 YT--NSIQT----REYRSPEVLLGAPWGCGADIWSTA 222
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 32/224 (14%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIK-IIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
Y ++ +G+G F+ V L + + G A+K I+ Q + Q RE + ++ +HPN
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQ---READMHRLFNHPN 87
Query: 107 IVKLFQVIETEK----TLYLVMEYASGGEVFDYLVLHGRMKEK-------EARAKFRQIV 155
I++L E+ +L++ + G +++ + R+K+K + I
Sbjct: 88 ILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI---ERLKDKGNFLTEDQILWLLLGIC 144
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-----------FTPGNKLDTF 204
++ H K HRDLK N+LL E + D G N+ T +
Sbjct: 145 RGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQR 204
Query: 205 CGSPPYAAPELF--QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 246
C + Y APELF Q DVWSLG +LY ++ G P+D
Sbjct: 205 C-TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 12/74 (16%)
Query: 521 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-----------FTPGNKLD 569
I ++ H K HRDLK N+LL E + D G N+ T +
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAA 202
Query: 570 TFCGSPPYAAPELF 583
C + Y APELF
Sbjct: 203 QRC-TISYRAPELF 215
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 53 TIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQ 112
+G+G F KV + + G VA+K + + + G LQ EV ++ M H N+++L
Sbjct: 45 ILGRGGFGKVYKGR-LADGTLVAVKRLKEERXQGGELQ-FQTEVEMISMAVHRNLLRLRG 102
Query: 113 VIETEKTLYLVMEYASGGEVFDYLV--------LHGRMKEKEARAKFRQIVSAVQYCHQK 164
T LV Y + G V L L +++ A R + +C
Sbjct: 103 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC-DP 161
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
KIIHRD+KA N+LLD E + DFG + ++ + G+ + APE K
Sbjct: 162 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGK-S 220
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTL 250
+ DV+ GV+L L++G FD + L
Sbjct: 221 SEKTDVFGYGVMLLELITGQRAFDLARL 248
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPPYAAPELFQGG 586
KIIHRD+KA N+LLD E + DFG + ++ + G+ + APE G
Sbjct: 162 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTG 218
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 120/280 (42%), Gaps = 47/280 (16%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE-----VAIKIIDKTQLNPGSLQKLFREVRIMKML-DHP 105
KT+G G F KV A GKE VA+K++ K+ + + L E++IM L H
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHE 95
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYL------VL----------HGRMKEKEARA 149
NIV L + ++ EY G++ ++L +L G KE
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 150 KFR-------QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF-------SNEF 195
+ R Q+ + + K IHRD+ A N+LL + KI DFG SN
Sbjct: 156 ELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 196 TPGN-KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGSTLREL 253
GN +L + APE Y + DVWS G++L+ + S L P+ G +
Sbjct: 216 VKGNARLPV-----KWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSK 269
Query: 254 RERVLRGKYRI--PFYMSTDCENLLKKFLVLNPAKRASLE 291
++++ Y++ P + + ++++ L P R + +
Sbjct: 270 FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 309
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 561
Q+ + + K IHRD+ A N+LL + KI DFG + +
Sbjct: 166 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 23/221 (10%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIID--KTQLNPGSLQKLFREVRIM 99
E + +Y++ IGKG+F +V A + VAIKII K LN + EVR++
Sbjct: 31 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI-----EVRLL 85
Query: 100 KMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARA-------KF- 151
++++ + + ++ ++ E+ Y L+ ++ R KF
Sbjct: 86 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFA 144
Query: 152 RQIVSAVQYCH--QKKIIHRDLKAENLLLDS--EMNIKIADFGFSNEFTPGNKLDTFCGS 207
+Q+ +A+ + + IIH DLK EN+LL + IKI DFG S + G ++ S
Sbjct: 145 QQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQS 202
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS 248
Y +PE+ G YD +D+WSLG IL + +G F G+
Sbjct: 203 RFYRSPEVLLGMPYD-LAIDMWSLGCILVEMHTGEPLFSGA 242
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 533 IIHRDLKAENLLLDS--EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IIH DLK EN+LL + IKI DFG S + G ++ S Y +PE+ G
Sbjct: 161 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLLG 213
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 23/221 (10%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIID--KTQLNPGSLQKLFREVRIM 99
E + +Y++ IGKG+F +V A + VAIKII K LN + EVR++
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI-----EVRLL 104
Query: 100 KMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARA-------KF- 151
++++ + + ++ ++ E+ Y L+ ++ R KF
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFA 163
Query: 152 RQIVSAVQYCH--QKKIIHRDLKAENLLLDS--EMNIKIADFGFSNEFTPGNKLDTFCGS 207
+Q+ +A+ + + IIH DLK EN+LL + IKI DFG S + G ++ S
Sbjct: 164 QQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL--GQRIYQXIQS 221
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS 248
Y +PE+ G YD +D+WSLG IL + +G F G+
Sbjct: 222 RFYRSPEVLLGMPYD-LAIDMWSLGCILVEMHTGEPLFSGA 261
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 533 IIHRDLKAENLLLDS--EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IIH DLK EN+LL + IKI DFG S + G ++ S Y +PE+ G
Sbjct: 180 IIHCDLKPENILLCNPKRXAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLLG 232
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 23/221 (10%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIID--KTQLNPGSLQKLFREVRIM 99
E + +Y++ IGKG+F +V A + VAIKII K LN + EVR++
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI-----EVRLL 104
Query: 100 KMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARA-------KF- 151
++++ + + ++ ++ E+ Y L+ ++ R KF
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFA 163
Query: 152 RQIVSAVQYCH--QKKIIHRDLKAENLLLDS--EMNIKIADFGFSNEFTPGNKLDTFCGS 207
+Q+ +A+ + + IIH DLK EN+LL + IKI DFG S + G ++ S
Sbjct: 164 QQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQS 221
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS 248
Y +PE+ G YD +D+WSLG IL + +G F G+
Sbjct: 222 RFYRSPEVLLGMPYD-LAIDMWSLGCILVEMHTGEPLFSGA 261
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 533 IIHRDLKAENLLLDS--EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IIH DLK EN+LL + IKI DFG S + G ++ S Y +PE+ G
Sbjct: 180 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLLG 232
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 74 VAIKIIDKT-QLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEV 132
VA+K+ +T +P + RE R L P++V + E + LY+ +G ++
Sbjct: 62 VALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDL 121
Query: 133 FDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 192
L G + A A RQI SA+ H HRD+K EN+L+ ++ + DFG +
Sbjct: 122 AAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIA 181
Query: 193 NEFTPG--NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTL 250
+ T +L G+ Y APE F + + D+++L +LY ++GS P+ G L
Sbjct: 182 SATTDEKLTQLGNTVGTLYYXAPERFS-ESHATYRADIYALTCVLYECLTGSPPYQGDQL 240
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 482 ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAE 541
E + LY+ +G ++ L G + A A RQI SA+ H HRD+K E
Sbjct: 104 EIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPE 163
Query: 542 NLLLDSEMNIKIADFGFSNEFTPG--NKLDTFCGSPPYAAPELF 583
N+L+ ++ + DFG ++ T +L G+ Y APE F
Sbjct: 164 NILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERF 207
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 53 TIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQ 112
+G+G F KV + + G VA+K + + + G LQ EV ++ M H N+++L
Sbjct: 37 ILGRGGFGKVYKGR-LADGXLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRG 94
Query: 113 VIETEKTLYLVMEYASGGEVFDYLV--------LHGRMKEKEARAKFRQIVSAVQYCHQK 164
T LV Y + G V L L +++ A R + +C
Sbjct: 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC-DP 153
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
KIIHRD+KA N+LLD E + DFG + ++ + G + APE K
Sbjct: 154 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGK-S 212
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTL 250
+ DV+ GV+L L++G FD + L
Sbjct: 213 SEKTDVFGYGVMLLELITGQRAFDLARL 240
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSN--EFTPGNKLDTFCGSPPYAAPELFQGG 586
KIIHRD+KA N+LLD E + DFG + ++ + G + APE G
Sbjct: 154 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTG 210
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 31/212 (14%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII-DKTQLNPGSLQKLFREVRIMKML--- 102
+Y++LK IGKG F +V A + VA+K++ ++ + + + + E+RI++ L
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE----EIRILEHLRKQ 153
Query: 103 DHPNIVKLFQVIET---EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARA-------KF- 151
D N + + ++E + + E S + L+ +K+ + + KF
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLS-------MNLYELIKKNKFQGFSLPLVRKFA 206
Query: 152 RQIVSAVQYCHQKKIIHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPP 209
I+ + H+ +IIH DLK EN+LL + IK+ DFG S ++ S
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC--YEHQRVYXXIQSRF 264
Query: 210 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 241
Y APE+ G +Y P +D+WSLG IL L++G
Sbjct: 265 YRAPEVILGARYGMP-IDMWSLGCILAELLTG 295
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 521 IVSAVQYCHQKKIIHRDLKAENLLLDSE--MNIKIADFGFSNEFTPGNKLDTFCGSPPYA 578
I+ + H+ +IIH DLK EN+LL + IK+ DFG S ++ S Y
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC--YEHQRVYXXIQSRFYR 266
Query: 579 APELFQG---GAPV 589
APE+ G G P+
Sbjct: 267 APEVILGARYGMPI 280
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 21/228 (9%)
Query: 52 KTIGKGNFAKV---KLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
K +G+G F V L + T +VA+K + + +++ E MK HPN++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 109 KLFQV-IETEKT----LYLVMEYASGGEVFDYLVLHGRMKE------KEARAKFR-QIVS 156
+L V IE +++ + G++ YL L+ R++ + KF I
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL-LYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--KLDTFCGSP-PYAAP 213
++Y + +HRDL A N +L +M + +ADFG S + G+ + P + A
Sbjct: 159 GMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
E + Y + DVW+ GV ++ + + G P+ G E+ + +L G
Sbjct: 219 ESLADRVYTS-KSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG 265
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 489 LVMEYASGGEVFDYLVLHGRMKE------KEARAKFR-QIVSAVQYCHQKKIIHRDLKAE 541
+++ + G++ YL L+ R++ + KF I ++Y + +HRDL A
Sbjct: 118 VILPFMKYGDLHTYL-LYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAAR 176
Query: 542 NLLLDSEMNIKIADFGFSNEFTPGN 566
N +L +M + +ADFG S + G+
Sbjct: 177 NCMLRDDMTVCVADFGLSKKIYSGD 201
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 35/192 (18%)
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYA---------SGGEVFDYLVLHGRMKEKEARAKFRQ 153
DHPN+++ + T++ LY+ +E S + L L KE + RQ
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQ---KEYNPISLLRQ 141
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSE-------------MNIKIADFGFSNEFTPGNK 200
I S V + H KIIHRDLK +N+L+ + + I I+DFG + G
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 201 -----LDTFCGSPPYAAPELFQ--GKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRE 252
L+ G+ + APEL + K+ +D++S+G + Y ++S G PF RE
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 261
Query: 253 LRERVLRGKYRI 264
++RG + +
Sbjct: 262 --SNIIRGIFSL 271
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 18/93 (19%)
Query: 510 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE-------------MNIKIADF 556
KE + RQI S V + H KIIHRDLK +N+L+ + + I I+DF
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 557 GFSNEFTPGNK-----LDTFCGSPPYAAPELFQ 584
G + G L+ G+ + APEL +
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLE 223
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 35/192 (18%)
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYA---------SGGEVFDYLVLHGRMKEKEARAKFRQ 153
DHPN+++ + T++ LY+ +E S + L L KE + RQ
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQ---KEYNPISLLRQ 141
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSE-------------MNIKIADFGFSNEFTPGNK 200
I S V + H KIIHRDLK +N+L+ + + I I+DFG + G
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 201 -----LDTFCGSPPYAAPELFQ--GKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRE 252
L+ G+ + APEL + K+ +D++S+G + Y ++S G PF RE
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 261
Query: 253 LRERVLRGKYRI 264
++RG + +
Sbjct: 262 --SNIIRGIFSL 271
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 18/93 (19%)
Query: 510 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE-------------MNIKIADF 556
KE + RQI S V + H KIIHRDLK +N+L+ + + I I+DF
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 557 GFSNEFTPGNK-----LDTFCGSPPYAAPELFQ 584
G + G L+ G+ + APEL +
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLE 223
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 37/195 (18%)
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAK--------FRQI 154
DHPN+++ + T++ LY+ +E + LV + ++ + + RQI
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLDSE-------------MNIKIADFGFSNEFTPGN-- 199
S V + H KIIHRDLK +N+L+ + + I I+DFG + G
Sbjct: 125 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 200 ---KLDTFCGSPPYAAPEL------FQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGST 249
L+ G+ + APEL Q K+ +D++S+G + Y ++S G PF
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244
Query: 250 LRELRERVLRGKYRI 264
RE ++RG + +
Sbjct: 245 SRE--SNIIRGIFSL 257
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 18/93 (19%)
Query: 510 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE-------------MNIKIADF 556
KE + RQI S V + H KIIHRDLK +N+L+ + + I I+DF
Sbjct: 113 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 557 GFSNEFTPGN-----KLDTFCGSPPYAAPELFQ 584
G + G L+ G+ + APEL +
Sbjct: 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLE 205
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 37/195 (18%)
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAK--------FRQI 154
DHPN+++ + T++ LY+ +E + LV + ++ + + RQI
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLDSE-------------MNIKIADFGFSNEFTPGN-- 199
S V + H KIIHRDLK +N+L+ + + I I+DFG + G
Sbjct: 125 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 184
Query: 200 ---KLDTFCGSPPYAAPEL------FQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGST 249
L+ G+ + APEL Q K+ +D++S+G + Y ++S G PF
Sbjct: 185 FRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244
Query: 250 LRELRERVLRGKYRI 264
RE ++RG + +
Sbjct: 245 SRE--SNIIRGIFSL 257
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 18/93 (19%)
Query: 510 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE-------------MNIKIADF 556
KE + RQI S V + H KIIHRDLK +N+L+ + + I I+DF
Sbjct: 113 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 557 GFSNEFTPGN-----KLDTFCGSPPYAAPELFQ 584
G + G L+ G+ + APEL +
Sbjct: 173 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLE 205
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 38/272 (13%)
Query: 47 KYKLLKTIGKGNFAKVKL--AKHVPTGK---EVAIKIIDKTQLNPGSLQK---LFREVRI 98
K LL+ +G+G+F V A+ + G+ VA+K ++++ SL++ E +
Sbjct: 17 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES----ASLRERIEFLNEASV 72
Query: 99 MKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE----------KEAR 148
MK ++V+L V+ + +VME + G++ YL E +E
Sbjct: 73 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 132
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE------FTPGNKLD 202
+I + Y + KK +HRDL A N ++ + +KI DFG + + + G K
Sbjct: 133 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK-- 190
Query: 203 TFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLR 259
G P + APE + + D+WS GV+L+ + S P+ G + ++ + V+
Sbjct: 191 ---GLLPVRWMAPESLKDGVFTTSS-DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 246
Query: 260 GKY-RIPFYMSTDCENLLKKFLVLNPAKRASL 290
G Y P +L++ NP R +
Sbjct: 247 GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF 278
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 13/81 (16%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE------FTPGNKLDTFCG 573
+I + Y + KK +HRDL A N ++ + +KI DFG + + + G K G
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK-----G 191
Query: 574 SPP--YAAPELFQGGAPVTSS 592
P + APE + G TSS
Sbjct: 192 LLPVRWMAPESLKDGVFTTSS 212
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 38/272 (13%)
Query: 47 KYKLLKTIGKGNFAKVKL--AKHVPTGK---EVAIKIIDKTQLNPGSLQK---LFREVRI 98
K LL+ +G+G+F V A+ + G+ VA+K ++++ SL++ E +
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES----ASLRERIEFLNEASV 73
Query: 99 MKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE----------KEAR 148
MK ++V+L V+ + +VME + G++ YL E +E
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE------FTPGNKLD 202
+I + Y + KK +HRDL A N ++ + +KI DFG + + + G K
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGK-- 191
Query: 203 TFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLR 259
G P + APE + + D+WS GV+L+ + S P+ G + ++ + V+
Sbjct: 192 ---GLLPVRWMAPESLKDGVFTTSS-DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 247
Query: 260 GKY-RIPFYMSTDCENLLKKFLVLNPAKRASL 290
G Y P +L++ NP R +
Sbjct: 248 GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF 279
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 13/81 (16%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE------FTPGNKLDTFCG 573
+I + Y + KK +HRDL A N ++ + +KI DFG + + + G K G
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGK-----G 192
Query: 574 SPP--YAAPELFQGGAPVTSS 592
P + APE + G TSS
Sbjct: 193 LLPVRWMAPESLKDGVFTTSS 213
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 38/272 (13%)
Query: 47 KYKLLKTIGKGNFAKVKL--AKHVPTGK---EVAIKIIDKTQLNPGSLQK---LFREVRI 98
K LL+ +G+G+F V A+ + G+ VA+K ++++ SL++ E +
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES----ASLRERIEFLNEASV 73
Query: 99 MKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE----------KEAR 148
MK ++V+L V+ + +VME + G++ YL E +E
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE------FTPGNKLD 202
+I + Y + KK +HRDL A N ++ + +KI DFG + + + G K
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK-- 191
Query: 203 TFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLR 259
G P + APE + + D+WS GV+L+ + S P+ G + ++ + V+
Sbjct: 192 ---GLLPVRWMAPESLKDGVFTTSS-DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 247
Query: 260 GKY-RIPFYMSTDCENLLKKFLVLNPAKRASL 290
G Y P +L++ NP R +
Sbjct: 248 GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 13/81 (16%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE------FTPGNKLDTFCG 573
+I + Y + KK +HRDL A N ++ + +KI DFG + + + G K G
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK-----G 192
Query: 574 SPP--YAAPELFQGGAPVTSS 592
P + APE + G TSS
Sbjct: 193 LLPVRWMAPESLKDGVFTTSS 213
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 21/230 (9%)
Query: 50 LLKTIGKGNFAKVKLAK-----HVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
L++ +G G F +V + + P+ +VA+K + + L L E I+ +H
Sbjct: 52 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNH 110
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKF------RQIVSA 157
NIV+ V ++++E +GG++ +L R + + A R I
Sbjct: 111 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 158 VQYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNE-FTPGNKLDTFCGSPP--YA 211
QY + IHRD+ A N LL KI DFG + + + G C P +
Sbjct: 171 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 212 APELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
PE F + + D WS GV+L+ + S G +P+ + +E+ E V G
Sbjct: 231 PPEAFMEGIFTS-KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 279
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 13/112 (11%)
Query: 488 YLVMEYASGGEVFDYL-VLHGRMKEKEARAKF------RQIVSAVQYCHQKKIIHRDLKA 540
++++E +GG++ +L R + + A R I QY + IHRD+ A
Sbjct: 127 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 186
Query: 541 ENLLLDSE---MNIKIADFGFSNE-FTPGNKLDTFCGSPP--YAAPELFQGG 586
N LL KI DFG + + + G C P + PE F G
Sbjct: 187 RNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEG 238
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 38/272 (13%)
Query: 47 KYKLLKTIGKGNFAKVKL--AKHVPTGK---EVAIKIIDKTQLNPGSLQK---LFREVRI 98
K LL+ +G+G+F V A+ + G+ VA+K ++++ SL++ E +
Sbjct: 15 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES----ASLRERIEFLNEASV 70
Query: 99 MKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE----------KEAR 148
MK ++V+L V+ + +VME + G++ YL E +E
Sbjct: 71 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 130
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP------GNKLD 202
+I + Y + KK +HRDL A N ++ + +KI DFG + + G K
Sbjct: 131 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK-- 188
Query: 203 TFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLR 259
G P + APE + + D+WS GV+L+ + S P+ G + ++ + V+
Sbjct: 189 ---GLLPVRWMAPESLKDGVFTTSS-DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 244
Query: 260 GKY-RIPFYMSTDCENLLKKFLVLNPAKRASL 290
G Y P +L++ NP R +
Sbjct: 245 GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 23/137 (16%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE----------KEARAKFRQIVS 523
+++L V+ + +VME + G++ YL E +E +I
Sbjct: 79 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 524 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP------GNKLDTFCGSPP- 576
+ Y + KK +HRDL A N ++ + +KI DFG + + G K G P
Sbjct: 139 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK-----GLLPV 193
Query: 577 -YAAPELFQGGAPVTSS 592
+ APE + G TSS
Sbjct: 194 RWMAPESLKDGVFTTSS 210
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 54/261 (20%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
G +LL+ +G F V A+ + VA+KI L + RE+ + H
Sbjct: 15 GSLQLLEIKARGRFGCVWKAQLM--NDFVAVKIF---PLQDKQSWQSEREIFSTPGMKHE 69
Query: 106 NIVKLFQVIETEK-------TLYLVMEYASGGEVFDYL---------VLHGRMKEKEARA 149
N L Q I EK L+L+ + G + DYL + H + E +R
Sbjct: 70 N---LLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCH--VAETMSRG 124
Query: 150 KFRQIVSAVQYC----HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-DTF 204
+ V +C H+ I HRD K++N+LL S++ +ADFG + F PG DT
Sbjct: 125 -LSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTH 183
Query: 205 --CGSPPYAAPELFQG----KKYDGPEVDVWSLGVILYTLVSGS-----------LPFDG 247
G+ Y APE+ +G ++ +D++++G++L+ LVS LPF+
Sbjct: 184 GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEE 243
Query: 248 S-----TLRELRERVLRGKYR 263
+L EL+E V+ K R
Sbjct: 244 EIGQHPSLEELQEVVVHKKMR 264
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 26/133 (19%)
Query: 477 LFQVIETEK-------TLYLVMEYASGGEVFDYL---------VLHGRMKEKEARAKFRQ 520
L Q I EK L+L+ + G + DYL + H + E +R
Sbjct: 71 LLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCH--VAETMSRG-LSY 127
Query: 521 IVSAVQYC----HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-DTF--CG 573
+ V +C H+ I HRD K++N+LL S++ +ADFG + F PG DT G
Sbjct: 128 LHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVG 187
Query: 574 SPPYAAPELFQGG 586
+ Y APE+ +G
Sbjct: 188 TRRYMAPEVLEGA 200
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 37/243 (15%)
Query: 47 KYKLLKTIGKGNFAKVKL--AKHVPTGK---EVAIKIIDKTQLNPGSLQK---LFREVRI 98
K LL+ +G+G+F V A+ + G+ VA+K ++++ SL++ E +
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES----ASLRERIEFLNEASV 73
Query: 99 MKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE----------KEAR 148
MK ++V+L V+ + +VME + G++ YL E +E
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP------GNKLD 202
+I + Y + KK +HRDL A N ++ + +KI DFG + + G K
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK-- 191
Query: 203 TFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLR 259
G P + APE + + D+WS GV+L+ + S P+ G + ++ + V+
Sbjct: 192 ---GLLPVRWMAPESLKDGVFTTSS-DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 247
Query: 260 GKY 262
G Y
Sbjct: 248 GGY 250
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 23/137 (16%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE----------KEARAKFRQIVS 523
+++L V+ + +VME + G++ YL E +E +I
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 524 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP------GNKLDTFCGSPP- 576
+ Y + KK +HRDL A N ++ + +KI DFG + + G K G P
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK-----GLLPV 196
Query: 577 -YAAPELFQGGAPVTSS 592
+ APE + G TSS
Sbjct: 197 RWMAPESLKDGVFTTSS 213
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 21/230 (9%)
Query: 50 LLKTIGKGNFAKVKLAK-----HVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
L++ +G G F +V + + P+ +VA+K + + L L E I+ +H
Sbjct: 75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNH 133
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKF------RQIVSA 157
NIV+ V ++++E +GG++ +L R + + A R I
Sbjct: 134 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 158 VQYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNE-FTPGNKLDTFCGSPP--YA 211
QY + IHRD+ A N LL KI DFG + + + G C P +
Sbjct: 194 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 212 APELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
PE F + + D WS GV+L+ + S G +P+ + +E+ E V G
Sbjct: 254 PPEAFMEGIFTS-KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 302
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 13/112 (11%)
Query: 488 YLVMEYASGGEVFDYL-VLHGRMKEKEARAKF------RQIVSAVQYCHQKKIIHRDLKA 540
++++E +GG++ +L R + + A R I QY + IHRD+ A
Sbjct: 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 209
Query: 541 ENLLLDSE---MNIKIADFGFSNE-FTPGNKLDTFCGSPP--YAAPELFQGG 586
N LL KI DFG + + + G C P + PE F G
Sbjct: 210 RNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEG 261
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 38/272 (13%)
Query: 47 KYKLLKTIGKGNFAKVKL--AKHVPTGK---EVAIKIIDKTQLNPGSLQK---LFREVRI 98
K LL+ +G+G+F V A+ + G+ VA+K ++++ SL++ E +
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES----ASLRERIEFLNEASV 73
Query: 99 MKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE----------KEAR 148
MK ++V+L V+ + +VME + G++ YL E +E
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 149 AKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP------GNKLD 202
+I + Y + KK +HRDL A N ++ + +KI DFG + + G K
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK-- 191
Query: 203 TFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLR 259
G P + APE + + D+WS GV+L+ + S P+ G + ++ + V+
Sbjct: 192 ---GLLPVRWMAPESLKDGVFTTSS-DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 247
Query: 260 GKY-RIPFYMSTDCENLLKKFLVLNPAKRASL 290
G Y P +L++ NP R +
Sbjct: 248 GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 23/137 (16%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE----------KEARAKFRQIVS 523
+++L V+ + +VME + G++ YL E +E +I
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 524 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP------GNKLDTFCGSPP- 576
+ Y + KK +HRDL A N ++ + +KI DFG + + G K G P
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK-----GLLPV 196
Query: 577 -YAAPELFQGGAPVTSS 592
+ APE + G TSS
Sbjct: 197 RWMAPESLKDGVFTTSS 213
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 132/295 (44%), Gaps = 70/295 (23%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK--MLDHPN 106
+++K IGKG + +V + K G++VA+K+ T+ FRE I + ++ H N
Sbjct: 40 QMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTTEE-----ASWFRETEIYQTVLMRHEN 92
Query: 107 IVKLFQVIETEKT-----LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ-Y 160
I+ F + + T LYL+ +Y G ++DYL + +A++ + S+V
Sbjct: 93 ILG-FIAADIKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGL 147
Query: 161 CH----------QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLD----TFC 205
CH + I HRDLK++N+L+ IAD G + +F + N++D T
Sbjct: 148 CHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV 207
Query: 206 GSPPYAAPEL---------FQGKKYDGPEVDVWSLGVILYTL----VSG------SLPF- 245
G+ Y PE+ FQ D++S G+IL+ + VSG LP+
Sbjct: 208 GTKRYMPPEVLDESLNRNHFQSYIM----ADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263
Query: 246 ----DGSTLRELRERVLRGKYRIPF---YMSTDCENLLKKFL----VLNPAKRAS 289
+ ++RE V K R F + S +C + K + NPA R +
Sbjct: 264 DLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLT 318
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 20/113 (17%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ-YCH----------QKKIIH 535
LYL+ +Y G ++DYL + +A++ + S+V CH + I H
Sbjct: 110 LYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAH 165
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLD----TFCGSPPYAAPELF 583
RDLK++N+L+ IAD G + +F + N++D T G+ Y PE+
Sbjct: 166 RDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 47/244 (19%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK--MLDHPNI 107
LL+ +GKG + +V + G+ VA+KI + + FRE + ML H NI
Sbjct: 41 LLECVGKGRYGEV--WRGSWQGENVAVKI-----FSSRDEKSWFRETELYNTVMLRHENI 93
Query: 108 VKLFQVIETEK----TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH- 162
+ T + L+L+ Y G ++DYL L + I S + + H
Sbjct: 94 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHI 152
Query: 163 -------QKKIIHRDLKAENLLLDSEMNIKIADFGF-------SNEFTPGNKLDTFCGSP 208
+ I HRDLK++N+L+ IAD G +N+ GN + G+
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN--NPRVGTK 210
Query: 209 PYAAPELF----QGKKYDG-PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR 263
Y APE+ Q +D VD+W+ G++L+ + R + + Y+
Sbjct: 211 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA-----------RRMVSNGIVEDYK 259
Query: 264 IPFY 267
PFY
Sbjct: 260 PPFY 263
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 18/112 (16%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH--------QKKIIHRDL 538
L+L+ Y G ++DYL L + I S + + H + I HRDL
Sbjct: 110 LWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDL 168
Query: 539 KAENLLLDSEMNIKIADFGF-------SNEFTPGNKLDTFCGSPPYAAPELF 583
K++N+L+ IAD G +N+ GN + G+ Y APE+
Sbjct: 169 KSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN--NPRVGTKRYMAPEVL 218
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 21/230 (9%)
Query: 50 LLKTIGKGNFAKVKLAK-----HVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
L++ +G G F +V + + P+ +VA+K + + L L E I+ L+H
Sbjct: 35 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKLNH 93
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKF------RQIVSA 157
NIV+ V ++++E +GG++ +L R + + A R I
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 158 VQYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNKLDT-FCGSPP--YA 211
QY + IHRD+ A N LL KI DFG + + + C P +
Sbjct: 154 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 212 APELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG 260
PE F + + D WS GV+L+ + S G +P+ + +E+ E V G
Sbjct: 214 PPEAFMEGIFTS-KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 488 YLVMEYASGGEVFDYL-VLHGRMKEKEARAKF------RQIVSAVQYCHQKKIIHRDLKA 540
++++E +GG++ +L R + + A R I QY + IHRD+ A
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 169
Query: 541 ENLLLDSE---MNIKIADFGFSNEF 562
N LL KI DFG + +
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMARDI 194
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.131 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,353,379
Number of Sequences: 62578
Number of extensions: 801789
Number of successful extensions: 6551
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 1343
Number of HSP's gapped (non-prelim): 2262
length of query: 708
length of database: 14,973,337
effective HSP length: 106
effective length of query: 602
effective length of database: 8,340,069
effective search space: 5020721538
effective search space used: 5020721538
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)