Query         psy2648
Match_columns 708
No_of_seqs    660 out of 3730
Neff          7.4 
Searched_HMMs 46136
Date          Fri Aug 16 21:34:46 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy2648.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2648hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0588|consensus              100.0 1.6E-62 3.4E-67  536.0  25.4  323   42-395     8-336 (786)
  2 KOG0586|consensus              100.0 1.4E-61 3.1E-66  528.2  22.0  319   40-398    50-371 (596)
  3 KOG4717|consensus              100.0 4.8E-61   1E-65  508.7  22.5  320   39-395    11-336 (864)
  4 KOG0598|consensus              100.0 9.8E-59 2.1E-63  481.1  22.8  247   42-289    21-270 (357)
  5 KOG0615|consensus              100.0 5.7E-59 1.2E-63  485.5  18.1  257   42-298   168-442 (475)
  6 KOG0583|consensus              100.0 2.5E-57 5.5E-62  494.0  28.5  258   41-298    12-280 (370)
  7 KOG0611|consensus              100.0 2.3E-58 4.9E-63  477.2  16.1  256   45-301    52-311 (668)
  8 KOG0575|consensus              100.0 1.2E-56 2.6E-61  489.3  28.4  256   46-302    18-278 (592)
  9 KOG0595|consensus              100.0   2E-56 4.3E-61  467.3  24.4  251   42-293     6-265 (429)
 10 KOG0616|consensus              100.0 1.4E-56 3.1E-61  450.6  22.0  243   43-288    41-284 (355)
 11 KOG0592|consensus              100.0 7.2E-54 1.6E-58  460.3  25.5  251   43-294    70-336 (604)
 12 KOG0603|consensus              100.0 4.1E-55 8.9E-60  479.9  13.5  526   53-645     1-561 (612)
 13 KOG0694|consensus              100.0 4.5E-53 9.7E-58  465.8  27.8  247   42-290   364-613 (694)
 14 KOG0581|consensus              100.0 4.1E-52   9E-57  431.8  25.0  251   44-297    77-339 (364)
 15 KOG0605|consensus              100.0 3.8E-52 8.1E-57  447.6  24.5  260   36-297   131-449 (550)
 16 KOG0591|consensus              100.0 2.2E-53 4.7E-58  424.3   7.6  248   42-290    15-275 (375)
 17 KOG0585|consensus              100.0 8.4E-52 1.8E-56  437.6  18.4  259   40-299    91-378 (576)
 18 KOG0033|consensus              100.0 4.5E-53 9.7E-58  414.5   7.0  255   43-298     8-272 (355)
 19 KOG0690|consensus              100.0 1.7E-51 3.8E-56  416.5  12.1  262   28-290   150-413 (516)
 20 KOG0597|consensus              100.0 1.4E-50   3E-55  434.2  16.9  247   46-294     2-249 (808)
 21 KOG0580|consensus              100.0 1.8E-50   4E-55  396.1  14.7  258   38-297    14-277 (281)
 22 PTZ00263 protein kinase A cata 100.0 9.5E-48 2.1E-52  414.7  25.8  252   40-294    12-269 (329)
 23 KOG0593|consensus              100.0 4.9E-49 1.1E-53  396.6  14.5  248   46-294     2-282 (396)
 24 KOG0032|consensus              100.0 2.6E-47 5.7E-52  415.6  26.5  255   42-298    31-298 (382)
 25 KOG0599|consensus              100.0 1.1E-48 2.4E-53  388.6  13.8  251   44-294    15-281 (411)
 26 KOG0610|consensus              100.0 1.7E-47 3.7E-52  400.2  23.4  256   38-294    69-390 (459)
 27 cd05612 STKc_PRKX_like Catalyt 100.0 2.4E-47 5.2E-52  404.0  23.9  249   46-297     1-258 (291)
 28 KOG0198|consensus              100.0 1.7E-47 3.6E-52  403.0  20.2  248   45-294    16-274 (313)
 29 cd05571 STKc_PKB Catalytic dom 100.0 4.4E-47 9.5E-52  408.3  23.9  242   52-294     1-249 (323)
 30 KOG0600|consensus              100.0   2E-47 4.4E-52  407.7  19.7  251   43-294   114-398 (560)
 31 PTZ00426 cAMP-dependent protei 100.0   2E-46 4.2E-51  406.7  25.5  251   41-294    25-282 (340)
 32 cd05593 STKc_PKB_gamma Catalyt 100.0   4E-46 8.7E-51  402.0  24.8  242   52-294     1-249 (328)
 33 cd05628 STKc_NDR1 Catalytic do 100.0 7.4E-46 1.6E-50  405.3  27.0  247   46-294     1-291 (363)
 34 KOG0192|consensus              100.0 5.5E-46 1.2E-50  402.0  25.5  247   45-294    40-297 (362)
 35 cd05631 STKc_GRK4 Catalytic do 100.0 9.8E-46 2.1E-50  390.3  26.7  247   47-294     1-259 (285)
 36 cd05585 STKc_YPK1_like Catalyt 100.0 5.4E-46 1.2E-50  397.7  24.2  236   54-290     1-238 (312)
 37 cd05595 STKc_PKB_beta Catalyti 100.0 6.6E-46 1.4E-50  399.3  24.7  242   52-294     1-249 (323)
 38 cd05587 STKc_cPKC Catalytic do 100.0 2.5E-45 5.3E-50  394.7  27.0  243   47-290     1-246 (324)
 39 cd05590 STKc_nPKC_eta Catalyti 100.0 1.2E-45 2.5E-50  396.9  24.2  238   52-290     1-241 (320)
 40 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.1E-45 4.6E-50  396.5  25.4  246   46-294     1-255 (333)
 41 cd05599 STKc_NDR_like Catalyti 100.0 1.7E-45 3.6E-50  402.1  24.6  247   46-294     1-294 (364)
 42 KOG0661|consensus              100.0   9E-47   2E-51  400.1  14.0  250   44-295     8-290 (538)
 43 cd05616 STKc_cPKC_beta Catalyt 100.0 3.2E-45 6.9E-50  393.7  26.4  243   47-290     1-246 (323)
 44 KOG0696|consensus              100.0 1.6E-46 3.6E-51  389.9  15.6  250   40-290   343-595 (683)
 45 cd05594 STKc_PKB_alpha Catalyt 100.0   1E-45 2.2E-50  397.9  22.1  242   52-294     1-250 (325)
 46 KOG0578|consensus              100.0 4.2E-46   9E-51  403.9  18.7  246   45-294   272-521 (550)
 47 cd05591 STKc_nPKC_epsilon Cata 100.0 2.3E-45 5.1E-50  394.4  24.1  242   52-294     1-252 (321)
 48 KOG0589|consensus              100.0 3.9E-46 8.5E-51  402.1  17.9  249   45-294     3-256 (426)
 49 cd05589 STKc_PKN Catalytic dom 100.0 4.1E-45   9E-50  393.0  25.6  240   48-289     1-245 (324)
 50 cd05629 STKc_NDR_like_fungal C 100.0 2.7E-45 5.9E-50  402.8  24.3  247   46-294     1-303 (377)
 51 cd05626 STKc_LATS2 Catalytic d 100.0 5.8E-45 1.3E-49  401.0  26.7  250   47-297     2-309 (381)
 52 cd05584 STKc_p70S6K Catalytic  100.0 3.7E-45 7.9E-50  393.4  24.5  243   51-294     1-254 (323)
 53 cd05588 STKc_aPKC Catalytic do 100.0 4.4E-45 9.4E-50  393.9  24.7  242   52-294     1-260 (329)
 54 cd05620 STKc_nPKC_delta Cataly 100.0 4.8E-45   1E-49  391.4  24.6  242   52-294     1-246 (316)
 55 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.5E-45 5.4E-50  397.8  22.4  247   46-294     1-283 (350)
 56 cd05582 STKc_RSK_N N-terminal  100.0 1.6E-45 3.5E-50  395.0  20.5  240   51-291     1-244 (318)
 57 cd07848 STKc_CDKL5 Catalytic d 100.0 9.3E-45   2E-49  381.9  25.7  248   46-294     1-282 (287)
 58 cd05592 STKc_nPKC_theta_delta  100.0 6.8E-45 1.5E-49  390.3  25.0  242   52-294     1-246 (316)
 59 KOG0582|consensus              100.0 1.9E-44 4.1E-49  379.9  27.7  260   37-298    17-298 (516)
 60 cd05614 STKc_MSK2_N N-terminal 100.0 8.4E-45 1.8E-49  391.5  25.5  248   47-294     1-265 (332)
 61 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.9E-44 4.1E-49  381.1  27.2  249   44-294     3-283 (288)
 62 cd05625 STKc_LATS1 Catalytic d 100.0 8.2E-45 1.8E-49  399.6  25.2  246   47-294     2-303 (382)
 63 cd05575 STKc_SGK Catalytic dom 100.0 6.7E-45 1.4E-49  391.2  23.8  239   52-291     1-242 (323)
 64 cd05598 STKc_LATS Catalytic do 100.0 5.2E-45 1.1E-49  400.2  23.4  247   46-294     1-299 (376)
 65 cd05570 STKc_PKC Catalytic dom 100.0 8.8E-45 1.9E-49  389.6  24.6  242   52-294     1-250 (318)
 66 KOG0197|consensus              100.0 2.7E-45 5.8E-50  396.8  20.2  246   47-297   207-458 (468)
 67 KOG0986|consensus              100.0 5.2E-46 1.1E-50  391.2  14.0  287   38-337   177-484 (591)
 68 cd05615 STKc_cPKC_alpha Cataly 100.0 1.9E-44 4.1E-49  388.0  25.9  244   47-291     1-247 (323)
 69 cd05619 STKc_nPKC_theta Cataly 100.0 1.6E-44 3.4E-49  387.5  25.1  242   52-294     1-246 (316)
 70 KOG0659|consensus              100.0 8.2E-45 1.8E-49  360.9  20.6  248   46-294     2-279 (318)
 71 cd05627 STKc_NDR2 Catalytic do 100.0 1.3E-44 2.8E-49  394.9  23.6  247   46-294     1-291 (360)
 72 cd05618 STKc_aPKC_iota Catalyt 100.0 2.3E-44 5.1E-49  388.4  24.8  238   52-290     1-250 (329)
 73 cd05596 STKc_ROCK Catalytic do 100.0 2.5E-44 5.4E-49  394.6  25.3  255   42-297    39-308 (370)
 74 cd05603 STKc_SGK2 Catalytic do 100.0 2.2E-44 4.7E-49  386.7  23.6  239   52-291     1-242 (321)
 75 cd05602 STKc_SGK1 Catalytic do 100.0 2.1E-44 4.5E-49  387.7  22.8  240   52-292     1-243 (325)
 76 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.5E-44 9.7E-49  385.7  25.1  239   52-291     1-249 (327)
 77 cd05621 STKc_ROCK2 Catalytic d 100.0 4.2E-44 9.1E-49  392.9  25.0  255   42-297    39-308 (370)
 78 cd06649 PKc_MEK2 Catalytic dom 100.0 2.6E-43 5.6E-48  380.3  30.6  250   45-297     4-305 (331)
 79 cd05604 STKc_SGK3 Catalytic do 100.0 2.6E-44 5.7E-49  386.9  22.8  239   52-291     1-242 (325)
 80 cd05586 STKc_Sck1_like Catalyt 100.0 1.3E-44 2.9E-49  389.9  20.1  241   54-294     1-251 (330)
 81 cd05605 STKc_GRK4_like Catalyt 100.0 9.8E-44 2.1E-48  375.0  26.1  247   47-294     1-259 (285)
 82 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.1E-43 2.4E-48  382.5  27.1  249   47-297     1-294 (338)
 83 KOG0663|consensus              100.0 1.5E-44 3.2E-49  368.6  18.9  256   43-299    73-367 (419)
 84 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.1E-43 2.3E-48  377.9  26.0  248   45-294     4-286 (303)
 85 PTZ00267 NIMA-related protein  100.0 3.7E-43   8E-48  398.0  31.1  249   43-294    64-321 (478)
 86 cd05601 STKc_CRIK Catalytic do 100.0 4.4E-44 9.5E-49  385.6  22.0  247   46-294     1-261 (330)
 87 cd05102 PTKc_VEGFR3 Catalytic  100.0 1.3E-43 2.7E-48  383.1  25.5  248   45-294     6-328 (338)
 88 PTZ00283 serine/threonine prot 100.0   3E-43 6.6E-48  399.9  29.7  250   44-294    30-295 (496)
 89 KOG0604|consensus              100.0 3.8E-45 8.2E-50  367.9  12.0  251   40-298    55-327 (400)
 90 cd05622 STKc_ROCK1 Catalytic d 100.0 2.1E-43 4.5E-48  387.4  26.1  252   42-294    39-302 (371)
 91 cd07876 STKc_JNK2 Catalytic do 100.0 8.5E-43 1.8E-47  380.4  29.6  252   43-298    18-320 (359)
 92 cd05608 STKc_GRK1 Catalytic do 100.0 2.9E-43 6.2E-48  370.6  24.9  243   54-297     1-261 (280)
 93 cd07862 STKc_CDK6 Catalytic do 100.0 3.8E-43 8.2E-48  370.3  25.7  246   47-294     2-285 (290)
 94 PTZ00036 glycogen synthase kin 100.0 4.9E-43 1.1E-47  392.9  28.1  247   45-298    65-356 (440)
 95 cd05597 STKc_DMPK_like Catalyt 100.0 4.6E-43   1E-47  378.5  26.5  249   46-294     1-264 (331)
 96 KOG0660|consensus              100.0 1.2E-43 2.6E-48  367.4  19.5  246   47-294    23-308 (359)
 97 cd06650 PKc_MEK1 Catalytic dom 100.0 1.3E-42 2.9E-47  375.3  28.6  250   45-297     4-303 (333)
 98 KOG0607|consensus              100.0 1.7E-44 3.6E-49  365.5  12.2  250   46-298    77-366 (463)
 99 cd07853 STKc_NLK Catalytic dom 100.0 5.3E-43 1.2E-47  383.9  25.2  251   47-298     1-293 (372)
100 cd05624 STKc_MRCK_beta Catalyt 100.0   5E-43 1.1E-47  378.2  24.6  248   46-294     1-264 (331)
101 PHA03212 serine/threonine kina 100.0 1.6E-42 3.5E-47  383.0  28.8  246   43-298    89-381 (391)
102 PLN00034 mitogen-activated pro 100.0 6.4E-43 1.4E-47  380.6  25.0  252   42-298    70-333 (353)
103 PTZ00266 NIMA-related protein  100.0 3.4E-42 7.3E-47  405.7  32.9  264   39-303     6-305 (1021)
104 KOG0594|consensus              100.0 3.5E-43 7.5E-48  365.0  21.1  249   45-294    10-300 (323)
105 cd07863 STKc_CDK4 Catalytic do 100.0 1.3E-42 2.7E-47  365.6  25.8  246   47-294     1-283 (288)
106 cd07874 STKc_JNK3 Catalytic do 100.0 1.4E-42 2.9E-47  378.0  26.5  251   44-298    15-316 (355)
107 cd07875 STKc_JNK1 Catalytic do 100.0 2.5E-42 5.4E-47  377.4  28.5  251   44-298    22-323 (364)
108 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.3E-42   5E-47  368.6  27.6  251   45-297     5-290 (309)
109 cd05623 STKc_MRCK_alpha Cataly 100.0 1.1E-42 2.4E-47  375.5  25.3  249   46-294     1-264 (332)
110 KOG0612|consensus              100.0   2E-44 4.4E-49  412.5  11.3  249   45-294    74-336 (1317)
111 cd06625 STKc_MEKK3_like Cataly 100.0 4.9E-42 1.1E-46  355.6  28.2  248   46-294     2-258 (263)
112 KOG0614|consensus              100.0 9.3E-45   2E-49  385.3   7.6  257   40-297   414-681 (732)
113 PHA02988 hypothetical protein; 100.0 3.2E-42 6.8E-47  363.9  26.5  239   52-295    26-274 (283)
114 KOG0201|consensus              100.0 1.6E-44 3.5E-49  380.5   8.7  246   47-294    14-261 (467)
115 cd05580 STKc_PKA Catalytic dom 100.0 5.3E-42 1.1E-46  362.3  28.0  246   46-294     1-252 (290)
116 cd05607 STKc_GRK7 Catalytic do 100.0 2.9E-42 6.2E-47  362.4  25.8  238   54-292     1-246 (277)
117 KOG0695|consensus              100.0 3.7E-43   8E-48  356.9  18.3  248   42-290   246-504 (593)
118 PF00069 Pkinase:  Protein kina 100.0 9.7E-43 2.1E-47  359.6  21.8  246   48-294     1-255 (260)
119 cd05630 STKc_GRK6 Catalytic do 100.0 4.1E-42 8.8E-47  362.9  26.8  247   47-294     1-259 (285)
120 cd05632 STKc_GRK5 Catalytic do 100.0 6.4E-42 1.4E-46  361.2  28.1  243   47-290     1-250 (285)
121 cd08219 STKc_Nek3 Catalytic do 100.0 8.2E-42 1.8E-46  353.0  27.9  246   47-294     1-250 (255)
122 cd05064 PTKc_EphR_A10 Catalyti 100.0 6.8E-42 1.5E-46  356.9  27.3  249   45-295     4-260 (266)
123 cd08529 STKc_FA2-like Catalyti 100.0 1.3E-41 2.7E-46  350.8  28.5  247   47-294     1-251 (256)
124 cd05096 PTKc_DDR1 Catalytic do 100.0 8.8E-42 1.9E-46  363.1  27.8  248   45-294     4-299 (304)
125 cd05048 PTKc_Ror Catalytic Dom 100.0 6.4E-42 1.4E-46  359.3  25.9  248   45-294     4-277 (283)
126 cd08223 STKc_Nek4 Catalytic do 100.0   2E-41 4.4E-46  349.8  29.2  247   47-294     1-252 (257)
127 cd05106 PTKc_CSF-1R Catalytic  100.0 4.2E-42 9.1E-47  377.5  24.8  250   43-294    35-366 (374)
128 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.9E-41 4.1E-46  360.0  27.8  252   44-297     4-290 (301)
129 cd08221 STKc_Nek9 Catalytic do 100.0 3.9E-41 8.4E-46  347.9  29.2  247   47-294     1-251 (256)
130 cd05116 PTKc_Syk Catalytic dom 100.0 1.9E-41 4.1E-46  351.3  26.6  240   53-294     2-249 (257)
131 cd07878 STKc_p38beta_MAPK11 Ca 100.0 6.3E-42 1.4E-46  370.8  23.7  250   45-298    14-303 (343)
132 PTZ00284 protein kinase; Provi 100.0   1E-41 2.2E-46  385.2  26.1  247   45-298   128-443 (467)
133 cd06615 PKc_MEK Catalytic doma 100.0 3.9E-41 8.4E-46  359.4  28.6  249   46-297     1-291 (308)
134 cd07861 STKc_CDK1_euk Catalyti 100.0 3.4E-41 7.5E-46  353.8  27.2  247   47-294     1-280 (285)
135 cd05104 PTKc_Kit Catalytic dom 100.0 1.3E-41 2.9E-46  373.7  25.0  249   45-295    34-369 (375)
136 cd05088 PTKc_Tie2 Catalytic do 100.0 2.2E-41 4.9E-46  360.4  25.6  250   43-294     4-274 (303)
137 cd05578 STKc_Yank1 Catalytic d 100.0   1E-41 2.2E-46  352.9  22.2  247   47-294     1-253 (258)
138 cd06646 STKc_MAP4K5 Catalytic  100.0 2.6E-41 5.6E-46  351.7  25.0  247   46-295     9-264 (267)
139 cd08228 STKc_Nek6 Catalytic do 100.0 5.8E-41 1.3E-45  348.7  27.4  249   45-294     1-259 (267)
140 cd07847 STKc_CDKL1_4 Catalytic 100.0 5.5E-41 1.2E-45  352.1  27.4  249   46-294     1-281 (286)
141 cd05049 PTKc_Trk Catalytic dom 100.0 2.8E-41 6.1E-46  353.6  24.9  249   45-295     4-276 (280)
142 KOG4721|consensus              100.0 7.7E-43 1.7E-47  374.2  12.9  234   49-294   127-362 (904)
143 cd05089 PTKc_Tie1 Catalytic do 100.0 6.7E-41 1.4E-45  355.4  27.5  247   46-294     2-269 (297)
144 cd05574 STKc_phototropin_like  100.0 1.3E-40 2.7E-45  355.9  29.8  252   46-298     1-294 (316)
145 cd08220 STKc_Nek8 Catalytic do 100.0   1E-40 2.2E-45  344.0  28.0  247   47-294     1-251 (256)
146 cd07839 STKc_CDK5 Catalytic do 100.0 1.7E-41 3.7E-46  356.3  22.4  247   47-294     1-279 (284)
147 cd06628 STKc_MAPKKK_Byr2_like  100.0 8.6E-41 1.9E-45  347.4  27.1  247   47-294     1-262 (267)
148 cd08217 STKc_Nek2 Catalytic do 100.0 1.1E-40 2.4E-45  344.4  27.6  247   47-294     1-260 (265)
149 cd05035 PTKc_Axl_like Catalyti 100.0 7.5E-41 1.6E-45  348.3  26.5  246   48-294     1-266 (273)
150 cd05090 PTKc_Ror1 Catalytic do 100.0 1.1E-40 2.3E-45  350.6  27.8  249   44-294     3-277 (283)
151 cd06645 STKc_MAP4K3 Catalytic  100.0 2.7E-41 5.9E-46  351.5  23.0  246   46-294     9-263 (267)
152 cd05609 STKc_MAST Catalytic do 100.0 1.4E-40   3E-45  354.2  28.9  245   46-291     1-265 (305)
153 cd05084 PTKc_Fes Catalytic dom 100.0 7.9E-41 1.7E-45  345.0  26.2  243   52-296     1-249 (252)
154 cd08218 STKc_Nek1 Catalytic do 100.0 1.1E-40 2.3E-45  344.5  27.3  247   47-294     1-251 (256)
155 cd05093 PTKc_TrkB Catalytic do 100.0   1E-40 2.3E-45  352.1  27.7  247   46-295     5-274 (288)
156 cd06613 STKc_MAP4K3_like Catal 100.0 1.3E-40 2.8E-45  344.5  27.8  246   46-294     3-258 (262)
157 cd05052 PTKc_Abl Catalytic dom 100.0 1.2E-40 2.6E-45  346.5  27.6  246   45-294     5-256 (263)
158 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.3E-40 2.8E-45  344.5  27.4  244   46-294     4-252 (256)
159 KOG4236|consensus              100.0 1.1E-42 2.5E-47  369.9  12.0  247   47-297   563-823 (888)
160 cd05075 PTKc_Axl Catalytic dom 100.0   1E-40 2.2E-45  347.8  26.6  246   48-294     1-265 (272)
161 KOG0658|consensus              100.0 9.5E-42   2E-46  353.8  18.3  241   47-294    25-304 (364)
162 cd08227 PK_STRAD_alpha Pseudok 100.0 8.4E-41 1.8E-45  359.8  26.3  247   50-297     2-311 (327)
163 cd05108 PTKc_EGFR Catalytic do 100.0 9.7E-41 2.1E-45  357.4  26.6  246   46-294     7-262 (316)
164 cd05062 PTKc_IGF-1R Catalytic  100.0 1.8E-40 3.9E-45  347.8  27.6  248   45-294     5-272 (277)
165 cd06631 STKc_YSK4 Catalytic do 100.0 1.7E-40 3.7E-45  345.2  26.9  246   47-294     1-260 (265)
166 cd06644 STKc_STK10_LOK Catalyt 100.0   2E-40 4.4E-45  350.3  27.9  246   46-294    12-267 (292)
167 cd06619 PKc_MKK5 Catalytic dom 100.0 2.3E-40 4.9E-45  347.9  28.1  241   47-294     2-251 (279)
168 cd06652 STKc_MEKK2 Catalytic d 100.0 2.7E-40 5.9E-45  343.9  28.4  247   46-294     2-259 (265)
169 cd06611 STKc_SLK_like Catalyti 100.0 8.7E-41 1.9E-45  350.5  24.6  246   46-294     5-260 (280)
170 cd05032 PTKc_InsR_like Catalyt 100.0 1.9E-40 4.2E-45  346.7  27.1  248   45-294     5-272 (277)
171 KOG0667|consensus              100.0 4.2E-41   9E-46  371.4  23.0  245   46-297   186-506 (586)
172 PHA03207 serine/threonine kina 100.0   2E-40 4.3E-45  366.5  28.5  244   46-298    92-380 (392)
173 cd06654 STKc_PAK1 Catalytic do 100.0 3.2E-40   7E-45  350.3  28.8  250   45-298    19-275 (296)
174 cd05033 PTKc_EphR Catalytic do 100.0   3E-40 6.5E-45  343.8  27.9  248   45-294     3-259 (266)
175 cd07832 STKc_CCRK Catalytic do 100.0 2.3E-40   5E-45  347.4  27.2  247   47-294     1-280 (286)
176 cd05072 PTKc_Lyn Catalytic dom 100.0 2.2E-40 4.7E-45  343.6  26.6  246   44-294     4-255 (261)
177 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.4E-40 5.2E-45  352.8  27.6  251   42-294    14-293 (307)
178 cd07868 STKc_CDK8 Catalytic do 100.0 1.1E-40 2.3E-45  356.6  25.0  239   51-294     6-312 (317)
179 cd05091 PTKc_Ror2 Catalytic do 100.0   7E-41 1.5E-45  351.7  23.0  249   44-294     3-277 (283)
180 cd06609 STKc_MST3_like Catalyt 100.0 1.7E-40 3.7E-45  347.1  25.8  246   46-294     1-249 (274)
181 cd07845 STKc_CDK10 Catalytic d 100.0 2.7E-40 5.9E-45  352.4  27.5  255   44-299     5-296 (309)
182 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.8E-40   1E-44  341.2  28.6  250   45-295     1-260 (267)
183 cd06643 STKc_SLK Catalytic dom 100.0 2.2E-40 4.7E-45  348.1  26.3  244   48-294     7-260 (282)
184 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.5E-40 3.2E-45  349.8  24.8  250   46-297     1-266 (286)
185 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3.8E-40 8.3E-45  341.5  27.5  248   46-294     1-262 (267)
186 KOG1989|consensus              100.0 4.3E-41 9.4E-46  381.8  22.0  245   43-294    32-305 (738)
187 cd00192 PTKc Catalytic domain  100.0 2.9E-40 6.2E-45  340.3  26.1  241   52-294     1-258 (262)
188 cd07850 STKc_JNK Catalytic dom 100.0 4.4E-40 9.6E-45  358.1  28.7  250   44-297    14-315 (353)
189 cd08229 STKc_Nek7 Catalytic do 100.0 1.5E-40 3.2E-45  345.7  23.8  251   45-296     1-261 (267)
190 cd06632 STKc_MEKK1_plant Catal 100.0   4E-40 8.7E-45  339.6  26.8  247   47-294     1-253 (258)
191 cd05068 PTKc_Frk_like Catalyti 100.0 6.8E-40 1.5E-44  340.1  28.7  247   45-296     5-257 (261)
192 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.4E-40 9.6E-45  345.1  27.4  249   45-295     5-273 (277)
193 cd07833 STKc_CDKL Catalytic do 100.0   3E-40 6.4E-45  346.9  26.0  249   46-294     1-283 (288)
194 cd06637 STKc_TNIK Catalytic do 100.0 2.5E-40 5.5E-45  344.8  25.3  246   45-294     5-267 (272)
195 cd05059 PTKc_Tec_like Catalyti 100.0 3.4E-40 7.3E-45  341.7  25.8  243   47-294     5-252 (256)
196 cd06655 STKc_PAK2 Catalytic do 100.0 9.3E-40   2E-44  347.0  29.8  250   45-298    18-274 (296)
197 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.6E-40 5.6E-45  366.2  26.6  250   43-294    34-391 (400)
198 cd05572 STKc_cGK_PKG Catalytic 100.0 3.8E-40 8.2E-45  341.9  26.1  243   54-297     1-256 (262)
199 cd07831 STKc_MOK Catalytic dom 100.0 4.2E-40 9.2E-45  344.7  26.6  244   48-294     1-277 (282)
200 KOG0194|consensus              100.0   5E-41 1.1E-45  368.9  20.4  252   45-297   156-418 (474)
201 cd05577 STKc_GRK Catalytic dom 100.0 2.3E-40 5.1E-45  347.2  24.6  240   54-294     1-252 (277)
202 cd05113 PTKc_Btk_Bmx Catalytic 100.0 5.1E-40 1.1E-44  340.9  26.7  246   45-295     3-253 (256)
203 cd06617 PKc_MKK3_6 Catalytic d 100.0 6.1E-40 1.3E-44  344.0  27.6  250   46-298     1-266 (283)
204 cd05606 STKc_beta_ARK Catalyti 100.0 4.3E-40 9.3E-45  346.0  26.5  240   53-294     1-253 (278)
205 cd06626 STKc_MEKK4 Catalytic d 100.0 7.5E-40 1.6E-44  339.1  27.8  247   47-294     1-259 (264)
206 cd05053 PTKc_FGFR Catalytic do 100.0 4.2E-40 9.1E-45  347.6  26.2  251   42-294     8-285 (293)
207 cd05066 PTKc_EphR_A Catalytic  100.0 6.2E-40 1.3E-44  341.9  27.1  249   45-295     3-261 (267)
208 cd05051 PTKc_DDR Catalytic dom 100.0 4.6E-40   1E-44  347.5  26.4  248   45-294     4-291 (296)
209 PRK13184 pknD serine/threonine 100.0 5.1E-40 1.1E-44  385.9  29.4  247   45-292     1-281 (932)
210 PHA03211 serine/threonine kina 100.0 4.1E-40 8.9E-45  369.8  27.4  240   45-294   168-453 (461)
211 cd05071 PTKc_Src Catalytic dom 100.0 6.7E-40 1.5E-44  341.1  27.0  246   45-296     5-256 (262)
212 PHA03209 serine/threonine kina 100.0 3.1E-40 6.8E-45  360.3  25.6  239   46-294    66-349 (357)
213 cd05099 PTKc_FGFR4 Catalytic d 100.0 7.6E-40 1.6E-44  350.2  28.0  250   43-294     9-287 (314)
214 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.2E-40 4.9E-45  347.8  23.4  249   46-294     1-281 (286)
215 cd05039 PTKc_Csk_like Catalyti 100.0   8E-40 1.7E-44  338.3  27.2  243   45-295     5-251 (256)
216 KOG0193|consensus              100.0 2.7E-41 5.9E-46  367.2  16.7  253   38-295   384-648 (678)
217 cd06651 STKc_MEKK3 Catalytic d 100.0 7.7E-40 1.7E-44  340.9  27.1  246   47-294     3-259 (266)
218 cd05060 PTKc_Syk_like Catalyti 100.0 7.8E-40 1.7E-44  338.9  26.9  240   52-294     1-249 (257)
219 cd05065 PTKc_EphR_B Catalytic  100.0 7.3E-40 1.6E-44  341.4  26.9  248   45-294     3-262 (269)
220 cd07841 STKc_CDK7 Catalytic do 100.0 4.3E-40 9.3E-45  348.3  25.5  251   47-298     1-287 (298)
221 cd05047 PTKc_Tie Catalytic dom 100.0 5.4E-40 1.2E-44  343.2  25.9  242   52-295     1-263 (270)
222 cd05115 PTKc_Zap-70 Catalytic  100.0 8.1E-40 1.7E-44  339.8  27.0  239   53-294     2-249 (257)
223 cd05109 PTKc_HER2 Catalytic do 100.0 8.8E-40 1.9E-44  342.9  27.4  247   45-294     6-262 (279)
224 cd05101 PTKc_FGFR2 Catalytic d 100.0 8.3E-40 1.8E-44  347.9  27.5  252   41-294    10-290 (304)
225 cd07860 STKc_CDK2_3 Catalytic  100.0 4.5E-40 9.8E-45  345.5  24.9  247   47-294     1-279 (284)
226 cd06630 STKc_MEKK1 Catalytic d 100.0 3.4E-40 7.4E-45  342.8  23.8  247   47-294     1-262 (268)
227 cd05061 PTKc_InsR Catalytic do 100.0 1.3E-39 2.8E-44  343.7  28.0  252   43-296     3-274 (288)
228 cd05094 PTKc_TrkC Catalytic do 100.0   1E-39 2.2E-44  345.1  27.2  247   45-294     4-276 (291)
229 cd05633 STKc_GRK3 Catalytic do 100.0 7.9E-40 1.7E-44  344.4  26.2  240   53-294     1-253 (279)
230 cd07843 STKc_CDC2L1 Catalytic  100.0 4.8E-40   1E-44  347.4  24.7  250   44-294     3-288 (293)
231 cd05092 PTKc_TrkA Catalytic do 100.0 8.4E-40 1.8E-44  343.7  26.3  246   46-294     5-275 (280)
232 cd05111 PTK_HER3 Pseudokinase  100.0 1.1E-39 2.3E-44  343.0  27.1  247   45-294     6-262 (279)
233 PF07714 Pkinase_Tyr:  Protein  100.0 3.9E-40 8.5E-45  342.9  23.5  244   49-294     2-256 (259)
234 cd05070 PTKc_Fyn_Yrk Catalytic 100.0   1E-39 2.2E-44  338.6  26.5  245   44-294     4-254 (260)
235 cd07865 STKc_CDK9 Catalytic do 100.0 8.1E-40 1.8E-44  347.3  26.2  252   42-294     8-305 (310)
236 cd05054 PTKc_VEGFR Catalytic d 100.0 3.6E-40 7.9E-45  357.1  23.9  247   46-294     7-327 (337)
237 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.4E-39 3.1E-44  342.0  27.6  248   46-296     3-277 (283)
238 cd05045 PTKc_RET Catalytic dom 100.0 1.1E-39 2.4E-44  344.3  26.8  246   47-294     1-280 (290)
239 cd06608 STKc_myosinIII_like Ca 100.0 9.2E-40   2E-44  339.8  25.7  248   44-294     4-270 (275)
240 cd05082 PTKc_Csk Catalytic dom 100.0 1.4E-39   3E-44  336.8  26.8  241   45-294     5-250 (256)
241 cd06640 STKc_MST4 Catalytic do 100.0 9.6E-40 2.1E-44  342.5  25.9  246   46-294     4-251 (277)
242 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.9E-40 8.4E-45  341.4  22.6  246   45-294     5-255 (261)
243 cd06612 STKc_MST1_2 Catalytic  100.0 7.4E-40 1.6E-44  337.6  24.5  244   46-294     3-251 (256)
244 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 5.4E-40 1.2E-44  345.7  23.9  247   45-294     4-264 (284)
245 cd08530 STKc_CNK2-like Catalyt 100.0 1.2E-39 2.6E-44  335.7  25.9  246   47-294     1-251 (256)
246 cd07844 STKc_PCTAIRE_like Cata 100.0 1.4E-39   3E-44  343.3  26.9  249   44-294     3-286 (291)
247 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.3E-39   5E-44  337.2  28.0  248   45-294     4-261 (268)
248 cd06638 STKc_myosinIIIA Cataly 100.0 1.5E-39 3.3E-44  341.8  26.9  250   41-294    13-281 (286)
249 cd05050 PTKc_Musk Catalytic do 100.0 1.4E-39   3E-44  343.1  26.5  251   44-296     3-285 (288)
250 KOG0603|consensus              100.0 7.1E-41 1.5E-45  367.8  17.3  242   43-296   319-566 (612)
251 cd06656 STKc_PAK3 Catalytic do 100.0 1.1E-39 2.3E-44  346.6  25.7  249   45-297    18-273 (297)
252 KOG0608|consensus              100.0 5.8E-41 1.3E-45  363.2  16.1  244   45-290   628-919 (1034)
253 cd05057 PTKc_EGFR_like Catalyt 100.0 2.4E-39 5.2E-44  339.6  27.8  247   45-294     6-262 (279)
254 KOG0579|consensus              100.0   1E-41 2.2E-46  368.3  10.0  246   46-294    32-287 (1187)
255 cd05069 PTKc_Yes Catalytic dom 100.0 2.5E-39 5.4E-44  336.0  27.6  246   44-295     4-255 (260)
256 cd07837 STKc_CdkB_plant Cataly 100.0 1.8E-39 3.8E-44  342.9  26.9  248   46-294     1-289 (295)
257 cd05055 PTKc_PDGFR Catalytic d 100.0 1.7E-39 3.7E-44  346.0  26.9  250   43-294    32-295 (302)
258 cd05067 PTKc_Lck_Blk Catalytic 100.0   2E-39 4.4E-44  336.3  26.9  244   45-294     5-254 (260)
259 cd06605 PKc_MAPKK Catalytic do 100.0 4.5E-40 9.8E-45  341.3  21.9  249   46-297     1-261 (265)
260 cd08225 STKc_Nek5 Catalytic do 100.0 1.3E-39 2.8E-44  336.0  25.1  247   47-294     1-252 (257)
261 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.2E-39 2.6E-44  342.2  25.3  248   43-294    13-277 (282)
262 cd05085 PTKc_Fer Catalytic dom 100.0   3E-39 6.4E-44  332.6  27.4  240   52-294     1-245 (250)
263 cd08215 STKc_Nek Catalytic dom 100.0 3.3E-39 7.2E-44  331.7  27.7  247   47-294     1-253 (258)
264 cd06623 PKc_MAPKK_plant_like C 100.0   4E-39 8.6E-44  333.4  28.3  246   47-294     2-254 (264)
265 cd05097 PTKc_DDR_like Catalyti 100.0 1.4E-39   3E-44  344.7  25.0  248   45-294     4-290 (295)
266 cd07836 STKc_Pho85 Catalytic d 100.0 2.3E-39   5E-44  339.8  26.4  246   47-294     1-279 (284)
267 cd06639 STKc_myosinIIIB Cataly 100.0 4.9E-39 1.1E-43  339.3  29.1  248   44-294    20-285 (291)
268 cd06629 STKc_MAPKKK_Bck1_like  100.0 2.7E-39 5.9E-44  337.4  26.6  248   47-294     2-267 (272)
269 KOG1026|consensus              100.0 1.6E-40 3.5E-45  375.4  18.4  247   46-294   486-756 (774)
270 cd07867 STKc_CDC2L6 Catalytic  100.0 1.9E-39   4E-44  346.5  25.8  239   51-294     6-312 (317)
271 cd06627 STKc_Cdc7_like Catalyt 100.0 6.9E-39 1.5E-43  329.3  28.9  247   47-294     1-249 (254)
272 cd06653 STKc_MEKK3_like_1 Cata 100.0 6.2E-39 1.3E-43  333.8  28.7  246   47-294     3-259 (264)
273 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.1E-39 8.9E-44  339.9  27.6  248   45-294     4-286 (291)
274 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 5.7E-40 1.2E-44  340.6  20.6  237   52-294     1-254 (258)
275 smart00219 TyrKc Tyrosine kina 100.0 3.7E-39   8E-44  332.1  26.3  245   48-294     1-255 (258)
276 cd06917 STKc_NAK1_like Catalyt 100.0 2.6E-39 5.7E-44  338.4  25.6  249   47-297     2-259 (277)
277 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.9E-39 8.4E-44  347.9  27.6  252   41-294     7-287 (334)
278 PLN00009 cyclin-dependent kina 100.0 5.8E-39 1.3E-43  339.3  28.3  252   45-297     1-288 (294)
279 cd05046 PTK_CCK4 Pseudokinase  100.0 3.6E-39 7.8E-44  337.0  26.4  247   46-294     5-270 (275)
280 cd05034 PTKc_Src_like Catalyti 100.0 6.2E-39 1.3E-43  332.3  27.9  246   44-294     4-255 (261)
281 cd07835 STKc_CDK1_like Catalyt 100.0 2.4E-39 5.2E-44  339.8  25.1  246   48-294     1-278 (283)
282 cd06658 STKc_PAK5 Catalytic do 100.0 1.2E-39 2.6E-44  345.5  23.0  250   46-299    22-278 (292)
283 cd05107 PTKc_PDGFR_beta Cataly 100.0   2E-39 4.3E-44  359.2  25.7  251   42-294    33-393 (401)
284 cd05040 PTKc_Ack_like Catalyti 100.0 3.3E-39 7.2E-44  333.6  25.6  240   52-294     1-252 (257)
285 cd05611 STKc_Rim15_like Cataly 100.0 3.4E-39 7.4E-44  334.4  25.7  239   52-294     2-249 (260)
286 cd05579 STKc_MAST_like Catalyt 100.0 1.9E-39 4.2E-44  335.2  23.2  240   54-294     1-255 (265)
287 cd06642 STKc_STK25-YSK1 Cataly 100.0 7.7E-40 1.7E-44  343.0  20.4  248   47-297     5-257 (277)
288 cd05112 PTKc_Itk Catalytic dom 100.0 9.1E-39   2E-43  330.1  28.1  246   45-295     3-253 (256)
289 cd07858 STKc_TEY_MAPK_plant Ca 100.0 3.7E-39   8E-44  348.7  26.2  252   46-298     5-296 (337)
290 cd05095 PTKc_DDR2 Catalytic do 100.0 4.2E-39   9E-44  341.2  26.1  248   46-295     5-292 (296)
291 KOG2345|consensus              100.0 1.1E-40 2.4E-45  328.5  13.0  247   46-294    21-294 (302)
292 cd05043 PTK_Ryk Pseudokinase d 100.0 6.5E-39 1.4E-43  336.3  27.2  248   45-294     5-270 (280)
293 cd05581 STKc_PDK1 Catalytic do 100.0   2E-39 4.3E-44  338.5  23.2  247   47-294     2-275 (280)
294 cd05041 PTKc_Fes_like Catalyti 100.0 5.8E-39 1.3E-43  330.6  26.3  240   52-294     1-246 (251)
295 cd06606 STKc_MAPKKK Catalytic  100.0 1.1E-38 2.3E-43  327.4  28.0  247   47-294     1-255 (260)
296 cd05613 STKc_MSK1_N N-terminal 100.0 5.9E-39 1.3E-43  338.5  26.5  248   47-294     1-266 (290)
297 PHA03390 pk1 serine/threonine- 100.0 4.2E-39   9E-44  336.7  24.8  238   45-294    13-260 (267)
298 cd07855 STKc_ERK5 Catalytic do 100.0 2.3E-39 4.9E-44  349.7  23.0  252   46-298     5-299 (334)
299 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 6.3E-39 1.4E-43  334.3  25.3  237   52-294     1-258 (262)
300 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.5E-39 9.7E-44  337.8  24.2  236   53-294     2-270 (274)
301 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 9.4E-39   2E-43  333.3  26.3  243   52-296     1-266 (269)
302 cd06641 STKc_MST3 Catalytic do 100.0 1.5E-38 3.3E-43  333.4  28.0  245   47-294     5-251 (277)
303 cd05103 PTKc_VEGFR2 Catalytic  100.0 4.1E-39   9E-44  349.4  24.4  249   45-295     6-334 (343)
304 cd07880 STKc_p38gamma_MAPK12 C 100.0   1E-38 2.3E-43  346.3  27.3  251   44-298    13-303 (343)
305 cd07849 STKc_ERK1_2_like Catal 100.0 1.3E-38 2.7E-43  344.2  27.4  251   45-298     4-297 (336)
306 cd06607 STKc_TAO Catalytic dom 100.0 1.9E-38 4.2E-43  338.1  28.4  244   46-294    15-265 (307)
307 cd05073 PTKc_Hck Catalytic dom 100.0 1.9E-38 4.1E-43  329.4  27.5  247   43-295     3-255 (260)
308 cd07840 STKc_CDK9_like Catalyt 100.0 9.7E-39 2.1E-43  334.6  25.5  246   48-294     1-282 (287)
309 cd07834 STKc_MAPK Catalytic do 100.0 3.9E-39 8.4E-44  346.5  23.0  251   47-298     1-294 (330)
310 cd06659 STKc_PAK6 Catalytic do 100.0 5.9E-39 1.3E-43  341.0  23.9  245   46-294    21-269 (297)
311 cd06624 STKc_ASK Catalytic dom 100.0 2.2E-38 4.7E-43  330.2  27.6  245   48-294    10-263 (268)
312 cd07842 STKc_CDK8_like Catalyt 100.0 8.8E-39 1.9E-43  340.6  25.1  247   47-294     1-311 (316)
313 cd08226 PK_STRAD_beta Pseudoki 100.0 7.9E-39 1.7E-43  344.6  24.9  247   52-298     4-313 (328)
314 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.2E-38 2.5E-43  335.6  25.6  246   47-294     5-277 (284)
315 cd07864 STKc_CDK12 Catalytic d 100.0 6.4E-39 1.4E-43  339.7  23.8  251   43-294     4-297 (302)
316 cd07866 STKc_BUR1 Catalytic do 100.0 6.1E-39 1.3E-43  340.7  23.6  250   44-294     6-306 (311)
317 cd05042 PTKc_Aatyk Catalytic d 100.0 1.4E-38   3E-43  331.8  25.8  243   52-296     1-266 (269)
318 cd06648 STKc_PAK_II Catalytic  100.0 2.5E-38 5.5E-43  333.8  28.0  244   47-294    20-267 (285)
319 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.8E-38 8.2E-43  332.4  29.3  246   46-294     1-264 (287)
320 cd05610 STKc_MASTL Catalytic d 100.0   2E-38 4.3E-43  372.4  30.1  151   43-193     1-152 (669)
321 cd05056 PTKc_FAK Catalytic dom 100.0   2E-38 4.3E-43  330.8  26.8  246   46-294     6-259 (270)
322 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 9.1E-39   2E-43  330.1  23.9  234   52-294     1-255 (259)
323 cd05110 PTKc_HER4 Catalytic do 100.0 1.6E-38 3.4E-43  338.3  26.1  247   45-294     6-262 (303)
324 PHA03210 serine/threonine kina 100.0 6.7E-39 1.5E-43  365.0  24.7  250   43-294   145-452 (501)
325 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.5E-38 3.2E-43  344.8  26.2  250   45-298     4-305 (342)
326 cd05083 PTKc_Chk Catalytic dom 100.0 1.6E-38 3.4E-43  328.6  25.2  240   45-294     5-248 (254)
327 cd06647 STKc_PAK_I Catalytic d 100.0 1.2E-38 2.7E-43  337.7  24.8  250   45-298    18-274 (293)
328 cd05058 PTKc_Met_Ron Catalytic 100.0 2.1E-38 4.5E-43  328.6  26.0  241   52-294     1-253 (262)
329 cd05122 PKc_STE Catalytic doma 100.0 4.4E-38 9.5E-43  321.5  28.0  245   47-294     1-249 (253)
330 cd05123 STKc_AGC Catalytic dom 100.0 1.3E-38 2.7E-43  327.3  24.1  240   54-294     1-245 (250)
331 cd08528 STKc_Nek10 Catalytic d 100.0   2E-38 4.3E-43  330.3  25.7  247   47-294     1-264 (269)
332 cd05044 PTKc_c-ros Catalytic d 100.0 9.1E-39   2E-43  332.6  23.0  242   52-295     1-265 (269)
333 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.9E-38   4E-43  331.0  25.4  246   48-294     1-266 (273)
334 cd06616 PKc_MKK4 Catalytic dom 100.0 8.2E-39 1.8E-43  336.9  22.8  246   46-294     4-265 (288)
335 cd07852 STKc_MAPK15 Catalytic  100.0 8.8E-39 1.9E-43  345.4  23.6  254   43-298     4-300 (337)
336 cd07838 STKc_CDK4_6_like Catal 100.0 3.4E-38 7.4E-43  330.8  27.1  245   48-294     1-282 (287)
337 KOG0574|consensus              100.0 1.6E-41 3.4E-46  341.0   1.7  243   47-294    34-281 (502)
338 KOG4645|consensus              100.0 7.4E-41 1.6E-45  387.6   7.1  252   47-298  1236-1496(1509)
339 KOG0596|consensus              100.0 2.4E-39 5.2E-44  348.2  17.8  245   47-294   362-625 (677)
340 KOG0983|consensus              100.0 2.6E-39 5.5E-44  322.2  16.6  250   42-294    88-347 (391)
341 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.4E-38 7.5E-43  331.5  26.1  245   47-294     5-277 (284)
342 cd05583 STKc_MSK_N N-terminal  100.0 2.6E-38 5.7E-43  333.3  25.1  248   47-294     1-261 (288)
343 cd07857 STKc_MPK1 Catalytic do 100.0 4.1E-38   9E-43  339.6  27.1  251   47-298     1-297 (332)
344 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.1E-38 8.9E-43  341.8  27.3  250   45-298    16-305 (345)
345 cd06614 STKc_PAK Catalytic dom 100.0 3.9E-38 8.4E-43  331.7  26.3  251   44-298    17-275 (286)
346 PTZ00024 cyclin-dependent prot 100.0 2.6E-38 5.7E-43  341.2  25.2  253   45-298     7-318 (335)
347 cd07851 STKc_p38 Catalytic dom 100.0 1.8E-38 3.8E-43  344.3  23.5  250   45-298    14-303 (343)
348 KOG4279|consensus              100.0 7.3E-40 1.6E-44  357.2  12.3  241   52-294   581-830 (1226)
349 KOG4250|consensus              100.0 1.7E-39 3.8E-44  359.3  14.8  242   46-288    13-296 (732)
350 cd05118 STKc_CMGC Catalytic do 100.0 2.5E-38 5.5E-43  331.1  22.8  246   48-294     1-278 (283)
351 KOG0577|consensus              100.0 1.1E-39 2.3E-44  351.4  12.2  243   47-294    27-276 (948)
352 PHA02882 putative serine/threo 100.0   1E-37 2.2E-42  331.1  27.1  247   46-295    12-291 (294)
353 KOG1095|consensus              100.0 1.9E-38 4.1E-43  370.3  23.3  248   46-295   692-956 (1025)
354 cd06635 STKc_TAO1 Catalytic do 100.0 1.5E-37 3.3E-42  333.1  28.3  243   47-294    26-275 (317)
355 cd06618 PKc_MKK7 Catalytic dom 100.0 1.2E-37 2.7E-42  329.9  26.5  250   42-294    11-271 (296)
356 cd07830 STKc_MAK_like Catalyti 100.0 6.1E-38 1.3E-42  328.8  23.9  245   48-294     1-278 (283)
357 cd05086 PTKc_Aatyk2 Catalytic  100.0 1.5E-37 3.2E-42  324.6  26.6  240   53-294     2-263 (268)
358 cd07879 STKc_p38delta_MAPK13 C 100.0 9.3E-38   2E-42  338.6  25.8  247   46-297    15-301 (342)
359 cd06657 STKc_PAK4 Catalytic do 100.0 9.8E-38 2.1E-42  330.9  25.3  246   50-299    24-276 (292)
360 cd08216 PK_STRAD Pseudokinase  100.0   1E-37 2.3E-42  332.8  25.4  239   58-297    12-299 (314)
361 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.3E-37   5E-42  333.8  28.1  246   45-294     9-286 (328)
362 KOG0584|consensus              100.0 5.9E-39 1.3E-43  351.3  15.6  247   44-294    37-294 (632)
363 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.1E-37 2.4E-42  326.4  24.5  247   46-294     4-277 (284)
364 cd08222 STKc_Nek11 Catalytic d 100.0 6.2E-38 1.3E-42  325.0  22.2  246   47-294     1-255 (260)
365 cd06633 STKc_TAO3 Catalytic do 100.0 3.5E-37 7.6E-42  329.8  28.7  243   47-294    22-271 (313)
366 cd07829 STKc_CDK_like Catalyti 100.0   1E-37 2.3E-42  326.3  23.4  246   48-294     1-277 (282)
367 KOG1035|consensus              100.0 1.8E-38   4E-43  366.5  16.5  247   43-294   476-869 (1351)
368 cd06634 STKc_TAO2 Catalytic do 100.0 3.7E-37   8E-42  328.7  25.2  243   47-294    16-265 (308)
369 cd05576 STKc_RPK118_like Catal 100.0 1.9E-37   4E-42  318.3  20.5  221   57-291     4-224 (237)
370 KOG0590|consensus              100.0 1.1E-39 2.3E-44  374.4   3.3  459   45-591    19-504 (601)
371 KOG4278|consensus              100.0 2.3E-37 4.9E-42  334.2  18.5  242   47-294   268-517 (1157)
372 KOG4257|consensus              100.0 1.6E-37 3.4E-42  336.4  16.3  249   43-294   379-643 (974)
373 KOG1187|consensus              100.0 1.3E-36 2.9E-41  330.6  23.7  247   46-296    75-348 (361)
374 KOG0196|consensus              100.0 1.7E-37 3.7E-42  344.2  15.0  250   42-294   625-885 (996)
375 KOG0199|consensus              100.0   2E-37 4.3E-42  339.3  14.9  246   46-294   110-366 (1039)
376 KOG0662|consensus              100.0 5.5E-37 1.2E-41  288.9  14.9  247   47-294     3-281 (292)
377 KOG0666|consensus              100.0   2E-37 4.3E-42  313.4  11.8  250   45-295    23-336 (438)
378 KOG1151|consensus              100.0 3.9E-37 8.4E-42  322.3  11.3  250   45-294   462-739 (775)
379 KOG0669|consensus              100.0 4.7E-38   1E-42  309.9   3.5  249   45-294    16-313 (376)
380 KOG1094|consensus              100.0   6E-36 1.3E-40  322.8  18.8  245   47-294   539-798 (807)
381 KOG0576|consensus              100.0 2.7E-37 5.9E-42  337.9   7.6  383   45-588    14-407 (829)
382 KOG1152|consensus              100.0 1.1E-36 2.4E-41  328.3  11.3  204   43-247   558-771 (772)
383 KOG0671|consensus              100.0 2.8E-36 6.2E-41  313.4  11.8  244   45-295    88-405 (415)
384 smart00220 S_TKc Serine/Threon 100.0 2.1E-34 4.5E-39  291.9  23.8  235   58-294     1-239 (244)
385 KOG1006|consensus              100.0 8.3E-37 1.8E-41  303.4   5.6  246   47-295    65-326 (361)
386 KOG0668|consensus              100.0 7.2E-36 1.6E-40  291.0  11.5  243   44-294    36-320 (338)
387 PLN03225 Serine/threonine-prot 100.0 3.7E-34   8E-39  329.2  22.9  250   41-297   127-454 (566)
388 KOG0587|consensus              100.0 2.9E-34 6.4E-39  323.0  21.2  246   45-294    18-280 (953)
389 KOG0200|consensus              100.0 2.2E-33 4.7E-38  325.6  24.4  247   47-295   297-574 (609)
390 PLN00113 leucine-rich repeat r 100.0 5.5E-34 1.2E-38  349.4  19.8  235   46-294   690-945 (968)
391 PLN03224 probable serine/threo 100.0 7.2E-33 1.6E-37  311.9  24.9  251   44-294   143-498 (507)
392 KOG1025|consensus              100.0 9.1E-34   2E-38  315.3  15.5  244   48-294   698-951 (1177)
393 KOG0984|consensus              100.0 1.6E-33 3.6E-38  271.1  13.0  217   46-265    46-274 (282)
394 KOG0598|consensus              100.0 7.1E-34 1.5E-38  295.8   8.2  207  434-640    31-270 (357)
395 KOG0665|consensus              100.0 7.5E-33 1.6E-37  282.1  13.9  244   46-294    17-308 (369)
396 KOG2052|consensus              100.0   2E-32 4.4E-37  288.9  17.3  241   46-294   211-497 (513)
397 KOG0664|consensus              100.0 4.3E-34 9.3E-39  284.4   3.0  246   48-294    55-341 (449)
398 KOG0595|consensus              100.0 3.9E-33 8.4E-38  292.6   9.7  164  433-596    15-199 (429)
399 KOG3653|consensus              100.0 4.2E-32 9.1E-37  288.5  15.1  242   45-294   209-497 (534)
400 smart00221 STYKc Protein kinas 100.0 1.1E-30 2.3E-35  262.7  23.2  214   48-263     1-220 (225)
401 KOG0670|consensus              100.0 2.3E-32   5E-37  291.7  10.2  204   46-255   432-645 (752)
402 KOG1345|consensus              100.0   2E-32 4.3E-37  272.9   8.8  242   45-292    23-280 (378)
403 KOG1027|consensus              100.0 4.2E-32 9.1E-37  304.5  11.6  232   52-294   515-765 (903)
404 cd00180 PKc Catalytic domain o 100.0 1.1E-29 2.4E-34  250.2  23.9  209   54-294     1-212 (215)
405 KOG1290|consensus              100.0 1.9E-30 4.1E-35  276.3  19.4  129   46-178    78-221 (590)
406 KOG0616|consensus              100.0   2E-31 4.4E-36  269.0   6.9  174  467-643    99-288 (355)
407 KOG0615|consensus              100.0 4.3E-30 9.2E-35  269.3  11.4  176  467-642   231-432 (475)
408 KOG1024|consensus              100.0 3.4E-29 7.3E-34  260.2  16.5  247   46-294   284-549 (563)
409 KOG0581|consensus              100.0 1.7E-29 3.7E-34  263.2  10.7  168  432-600    83-266 (364)
410 KOG0583|consensus              100.0 4.9E-29 1.1E-33  272.0  12.9  168  471-640    79-268 (370)
411 KOG0592|consensus              100.0 3.1E-29 6.8E-34  270.5  10.5  175  468-642   130-333 (604)
412 COG0515 SPS1 Serine/threonine  100.0 6.1E-27 1.3E-31  243.8  27.0  244   48-294     2-273 (384)
413 KOG0588|consensus              100.0 5.9E-29 1.3E-33  273.2  11.1  174  467-640    67-256 (786)
414 KOG0590|consensus              100.0 7.4E-30 1.6E-34  293.3   4.2  254   45-299   316-591 (601)
415 KOG0575|consensus              100.0 5.3E-29 1.1E-33  272.9  10.6  181  465-645    71-267 (592)
416 KOG0694|consensus              100.0 1.3E-29 2.9E-34  280.4   5.7  208  433-642   373-614 (694)
417 KOG0593|consensus              100.0 2.3E-29   5E-34  254.5   5.8  182  435-641     9-206 (396)
418 KOG0605|consensus              100.0 5.1E-29 1.1E-33  269.2   8.6  206  435-642   148-437 (550)
419 KOG1167|consensus              100.0 1.3E-28 2.8E-33  259.7  10.7  242   46-294    36-379 (418)
420 KOG0611|consensus               99.9 3.4E-28 7.3E-33  253.2  10.4  124  466-589   107-230 (668)
421 PLN00181 protein SPA1-RELATED;  99.9 2.5E-28 5.3E-33  293.1  10.5  193  101-297    28-269 (793)
422 KOG0599|consensus               99.9 5.3E-28 1.1E-32  241.3   8.2  152  465-636    76-227 (411)
423 KOG0600|consensus               99.9 1.4E-27 3.1E-32  255.9  11.0  145  466-636   170-319 (560)
424 PRK09188 serine/threonine prot  99.9 8.4E-27 1.8E-31  252.7  17.0  170   39-219    11-195 (365)
425 KOG0658|consensus               99.9 4.5E-28 9.7E-33  252.1   6.8  147  467-639    72-228 (364)
426 KOG0663|consensus               99.9 4.7E-27   1E-31  240.7  10.5  148  468-641   131-282 (419)
427 smart00750 KIND kinase non-cat  99.9   3E-26 6.5E-31  223.8  13.7  152  130-294     1-163 (176)
428 KOG0659|consensus               99.9 8.1E-27 1.8E-31  232.8   8.9  143  467-635    56-200 (318)
429 KOG1163|consensus               99.9 9.2E-26   2E-30  222.1  16.2  238   39-282     8-266 (341)
430 KOG0661|consensus               99.9 4.6E-27   1E-31  250.4   6.9  127  466-593    63-191 (538)
431 KOG0604|consensus               99.9 1.8E-26 3.9E-31  233.2  10.4  179  468-646   111-321 (400)
432 KOG1164|consensus               99.9 1.2E-24 2.6E-29  234.5  22.9  244   47-294    19-291 (322)
433 KOG0597|consensus               99.9   2E-26 4.4E-31  248.7   8.8  133  467-600    56-189 (808)
434 KOG0610|consensus               99.9 2.3E-26   5E-31  241.7   8.6  208  434-642    83-383 (459)
435 KOG0594|consensus               99.9 1.2E-25 2.7E-30  234.1  13.3  150  467-642    65-226 (323)
436 KOG1165|consensus               99.9 1.2E-24 2.5E-29  222.9  19.8  210   47-262    29-256 (449)
437 KOG0986|consensus               99.9 6.7E-27 1.4E-31  247.3   3.5  211  432-642   189-436 (591)
438 KOG0033|consensus               99.9 2.1E-26 4.6E-31  226.9   6.0  178  467-644    65-264 (355)
439 KOG0591|consensus               99.9 8.2E-27 1.8E-31  234.0   2.3  137  467-603    73-220 (375)
440 KOG0690|consensus               99.9 9.8E-27 2.1E-31  236.8   2.8  234  466-700   222-508 (516)
441 KOG0660|consensus               99.9 5.2E-26 1.1E-30  236.3   7.4  143  468-636    77-227 (359)
442 KOG0606|consensus               99.9 2.2E-25 4.9E-30  256.0  11.8  212   40-291    77-307 (1205)
443 KOG1035|consensus               99.9 1.1E-23 2.3E-28  244.7  25.7  197   90-295   227-433 (1351)
444 KOG0586|consensus               99.9 2.1E-25 4.5E-30  245.0   9.7  178  467-644   110-303 (596)
445 KOG0614|consensus               99.9 7.4E-27 1.6E-31  249.2  -3.5  175  468-642   476-667 (732)
446 KOG0032|consensus               99.9 8.7E-25 1.9E-29  238.8  11.5  177  469-646    93-292 (382)
447 KOG4717|consensus               99.9 1.3E-24 2.8E-29  232.1  11.8  145  467-636    72-218 (864)
448 KOG0198|consensus               99.9 9.2E-25   2E-29  230.7  10.3  118  468-585    70-195 (313)
449 KOG0578|consensus               99.9 4.2E-25 9.2E-30  240.6   7.6  175  467-643   325-519 (550)
450 KOG0612|consensus               99.9 2.2E-25 4.8E-30  256.8   5.3  203  436-640    83-328 (1317)
451 KOG0585|consensus               99.9 4.4E-25 9.6E-30  235.0   6.6  176  467-642   163-367 (576)
452 KOG0608|consensus               99.9 1.7E-24 3.6E-29  235.8  11.1  129  464-592   681-852 (1034)
453 cd05147 RIO1_euk RIO kinase fa  99.9 4.2E-24 9.2E-29  212.8  11.7  141   51-195     2-167 (190)
454 KOG0696|consensus               99.9 5.7E-25 1.2E-29  229.7   4.9  172  470-643   408-597 (683)
455 KOG0192|consensus               99.9 3.4E-24 7.5E-29  232.3  11.0  129  467-595    94-230 (362)
456 cd05628 STKc_NDR1 Catalytic do  99.9 4.3E-24 9.4E-29  233.6  11.3  129  467-595    56-220 (363)
457 cd05571 STKc_PKB Catalytic dom  99.9 7.8E-24 1.7E-28  227.8  12.3  175  467-641    50-240 (323)
458 cd05594 STKc_PKB_alpha Catalyt  99.9 1.3E-23 2.9E-28  226.0  13.6  179  467-645    50-245 (325)
459 cd05145 RIO1_like RIO kinase f  99.9 4.1E-23   9E-28  205.6  15.1  143   50-196     1-168 (190)
460 KOG0580|consensus               99.9 1.9E-24 4.1E-29  213.1   5.3  207  433-640    27-266 (281)
461 PRK10359 lipopolysaccharide co  99.9 1.7E-23 3.8E-28  212.2  12.4  172   45-239    30-216 (232)
462 cd05625 STKc_LATS1 Catalytic d  99.9 1.4E-23 3.1E-28  231.0  12.4   94  467-560    56-149 (382)
463 cd05593 STKc_PKB_gamma Catalyt  99.9 1.4E-23 3.1E-28  226.4  11.6  179  467-645    50-244 (328)
464 cd05604 STKc_SGK3 Catalytic do  99.9 2.6E-23 5.6E-28  223.8  13.2  176  467-642    51-242 (325)
465 cd05602 STKc_SGK1 Catalytic do  99.9 1.8E-23 3.9E-28  225.0  11.9  176  467-642    51-242 (325)
466 cd05588 STKc_aPKC Catalytic do  99.9 2.1E-23 4.6E-28  225.1  12.2  121  469-589    53-174 (329)
467 KOG0589|consensus               99.9 1.3E-23 2.8E-28  227.6  10.5  194  434-634    10-222 (426)
468 cd05629 STKc_NDR_like_fungal C  99.9 1.8E-23 3.8E-28  229.9  11.5   94  468-561    57-150 (377)
469 cd05586 STKc_Sck1_like Catalyt  99.9 2.8E-23   6E-28  223.9  12.5  172  470-641    54-243 (330)
470 cd05603 STKc_SGK2 Catalytic do  99.9 3.1E-23 6.8E-28  222.6  12.8  175  467-641    51-241 (321)
471 PRK12274 serine/threonine prot  99.9 1.3E-22 2.7E-27  202.1  16.0  187   49-248     5-210 (218)
472 cd05626 STKc_LATS2 Catalytic d  99.9 2.5E-23 5.3E-28  229.2  12.1   95  467-561    56-150 (381)
473 cd05585 STKc_YPK1_like Catalyt  99.9 3.7E-23 7.9E-28  221.3  12.9  127  467-593    48-175 (312)
474 cd05575 STKc_SGK Catalytic dom  99.9 3.7E-23 7.9E-28  222.4  12.7  176  467-642    51-242 (323)
475 cd05599 STKc_NDR_like Catalyti  99.9   2E-23 4.4E-28  228.0  10.7  126  467-592    56-220 (364)
476 cd05592 STKc_nPKC_theta_delta   99.9 4.3E-23 9.4E-28  221.4  12.3  128  468-595    52-180 (316)
477 PTZ00426 cAMP-dependent protei  99.9   4E-23 8.7E-28  224.2  12.0  176  467-644    86-276 (340)
478 cd05621 STKc_ROCK2 Catalytic d  99.9 3.6E-23 7.9E-28  227.2  11.6  119  467-586    98-218 (370)
479 cd05595 STKc_PKB_beta Catalyti  99.9 4.7E-23   1E-27  221.8  11.9  127  467-593    50-177 (323)
480 cd05591 STKc_nPKC_epsilon Cata  99.9 5.5E-23 1.2E-27  220.9  12.4  128  469-596    53-181 (321)
481 cd05618 STKc_aPKC_iota Catalyt  99.9 6.1E-23 1.3E-27  221.5  12.7  127  469-595    53-180 (329)
482 cd05617 STKc_aPKC_zeta Catalyt  99.9 6.4E-23 1.4E-27  221.2  12.7  121  469-589    53-174 (327)
483 cd05590 STKc_nPKC_eta Catalyti  99.9 5.9E-23 1.3E-27  220.7  11.6  127  469-595    53-180 (320)
484 cd05598 STKc_LATS Catalytic do  99.9 4.3E-23 9.2E-28  226.6  10.7  136  467-602    56-235 (376)
485 cd05620 STKc_nPKC_delta Cataly  99.9 8.2E-23 1.8E-27  219.3  12.2  124  469-592    53-177 (316)
486 cd05616 STKc_cPKC_beta Catalyt  99.9 8.9E-23 1.9E-27  219.5  12.4  127  469-595    58-185 (323)
487 cd05627 STKc_NDR2 Catalytic do  99.9 1.4E-22   3E-27  221.3  13.8  173  468-641    57-284 (360)
488 KOG0695|consensus               99.9 2.2E-23 4.8E-28  212.9   6.1  124  467-590   306-430 (593)
489 cd05614 STKc_MSK2_N N-terminal  99.9 1.8E-22 3.9E-27  217.7  13.5  120  470-589    63-184 (332)
490 PTZ00263 protein kinase A cata  99.9 1.2E-22 2.6E-27  219.2  11.6  174  467-642    73-261 (329)
491 cd05622 STKc_ROCK1 Catalytic d  99.9 1.4E-22   3E-27  222.6  11.8  119  467-586    98-218 (371)
492 KOG4721|consensus               99.9   4E-23 8.7E-28  223.0   7.1  151  436-586   132-286 (904)
493 cd05615 STKc_cPKC_alpha Cataly  99.9 1.6E-22 3.4E-27  217.7  11.5  119  470-588    59-178 (323)
494 cd05587 STKc_cPKC Catalytic do  99.9 2.3E-22 5.1E-27  216.3  12.8  119  470-588    59-178 (324)
495 cd05619 STKc_nPKC_theta Cataly  99.9   2E-22 4.2E-27  216.4  12.1  124  469-592    53-177 (316)
496 KOG0662|consensus               99.9 4.7E-23   1E-27  194.9   6.2  125  468-593    57-183 (292)
497 cd05584 STKc_p70S6K Catalytic   99.9   3E-22 6.5E-27  215.4  13.3  177  467-643    55-247 (323)
498 PTZ00267 NIMA-related protein   99.9 3.3E-22 7.2E-27  226.9  13.8  124  467-590   120-250 (478)
499 PRK10345 hypothetical protein;  99.9 1.1E-21 2.4E-26  197.8  15.9  135   51-193     7-157 (210)
500 cd05612 STKc_PRKX_like Catalyt  99.9 9.6E-23 2.1E-27  215.8   8.6  142  467-636    56-197 (291)

No 1  
>KOG0588|consensus
Probab=100.00  E-value=1.6e-62  Score=536.03  Aligned_cols=323  Identities=41%  Similarity=0.664  Sum_probs=284.1

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccC-CCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT-QLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~-~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  120 (708)
                      ...+|-|+++++||+|+-|.|.+|+|..||+.+|||+|.+. .........+.+||-||+.|.||||++||++|+++.++
T Consensus         8 ~~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~l   87 (786)
T KOG0588|consen    8 KNTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHL   87 (786)
T ss_pred             cccccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceE
Confidence            45689999999999999999999999999999999999987 44445556789999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q psy2648         121 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK  200 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~  200 (708)
                      |+|+||++||+|++|+..+|+++|.++..+|+||+.|+.|||..+|+||||||||+|||.+++|||+|||+|..-.++..
T Consensus        88 ylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl  167 (786)
T KOG0588|consen   88 YLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL  167 (786)
T ss_pred             EEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998888999


Q ss_pred             ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhh
Q psy2648         201 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL  280 (708)
Q Consensus       201 ~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L  280 (708)
                      +.+.||+|.|+|||++.|.+|+|.++||||+|||||.||+|++||++.+.+.++.+|.+|.|.+|.++|+++++||.+||
T Consensus       168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml  247 (786)
T KOG0588|consen  168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLRRML  247 (786)
T ss_pred             ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhCCCCCCCHHHHh---hhhhCCCCcccCCCCCCCccCCCCCCCCCCccccccccchhhhhhhhhhhccCCCCCCcCCCC
Q psy2648         281 VLNPAKRASLEVSG---EVTLGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASIKENTARLNAGRPAKNTASIA  357 (708)
Q Consensus       281 ~~dP~~Rps~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  357 (708)
                      .+||.+|+|+++|.   |+.-....            ..+...+.+...   ..+                =.+....||
T Consensus       248 ~VDp~~RiT~~eI~kHP~l~g~~~~------------~~~~~~~~~~~~---~i~----------------s~ps~~~ID  296 (786)
T KOG0588|consen  248 DVDPSTRITTEEILKHPFLSGYTSL------------PSSKSLRPPVSV---PIL----------------SIPSIQEID  296 (786)
T ss_pred             ccCccccccHHHHhhCchhhcCCCC------------ChhhhcCCCccc---cee----------------ecCCcccCC
Confidence            99999999999998   65432110            000000101000   000                011234689


Q ss_pred             hhhHHHHhc--CCCCHHHHHHHHhccCCCCcccccccccc
Q psy2648         358 PLDTKALVG--LGYSRSEIEESLSQAKYDDPESDGSRSGS  395 (708)
Q Consensus       358 ~~~~~~~~~--~g~~~~~i~~~l~~~~~~~~~~~y~~l~~  395 (708)
                      |.+++.|.-  +|-+++.+.+.|.+...|+....|+||.+
T Consensus       297 p~Il~~l~iLwc~~d~~kl~~kLls~~~n~EK~~Y~LLl~  336 (786)
T KOG0588|consen  297 PLILQHLCILWCGRDPEKLVEKLLSPDDNDEKTLYFLLLR  336 (786)
T ss_pred             HHHHhhhhheeecCChHHHHHHHcCCCcchhHHHHHHHHH
Confidence            999998875  55678899999999999999999998744


No 2  
>KOG0586|consensus
Probab=100.00  E-value=1.4e-61  Score=528.16  Aligned_cols=319  Identities=66%  Similarity=0.993  Sum_probs=293.7

Q ss_pred             CCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE
Q psy2648          40 RDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT  119 (708)
Q Consensus        40 ~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  119 (708)
                      .+++.++.|.+.++||+|.|++|++|+|..|+..||||+|++...+....+++.+|+++|+.|+|||||+||++++++..
T Consensus        50 ~~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~  129 (596)
T KOG0586|consen   50 DDSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT  129 (596)
T ss_pred             cccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence            67888999999999999999999999999999999999999999998888889999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         120 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      +|+||||+.+|++++|+..++++.|.+++.+|.|+++|++|||+++|||||||.+||||+.+.++||+|||++..+..+.
T Consensus       130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~  209 (596)
T KOG0586|consen  130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL  209 (596)
T ss_pred             eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q psy2648         200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKF  279 (708)
Q Consensus       200 ~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~  279 (708)
                      .+.++||+++|+|||++.+.+|+++++|+|||||+||.|++|.+||++.+..++..+++.|++++|+++|.+|++||++|
T Consensus       210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~  289 (596)
T KOG0586|consen  210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKF  289 (596)
T ss_pred             cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhCCCCCCCHHHHh---hhhhCCCCcccCCCCCCCccCCCCCCCCCCccccccccchhhhhhhhhhhccCCCCCCcCCC
Q psy2648         280 LVLNPAKRASLEVSG---EVTLGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASIKENTARLNAGRPAKNTASI  356 (708)
Q Consensus       280 L~~dP~~Rps~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  356 (708)
                      |.++|.+|+++++++   |+.....          .....+..++.                              +.-+
T Consensus       290 lvl~Pskr~~~dqim~~~W~n~~~~----------~~~l~p~~e~~------------------------------~~~~  329 (596)
T KOG0586|consen  290 LVLNPSKRGPCDQIMKDRWRNDLLE----------ARLLAPLIERS------------------------------TPFI  329 (596)
T ss_pred             hccCccccCCHHHhhhhcccchhhh----------hhhhhcccccC------------------------------ccch
Confidence            999999999999999   5443221          01122222221                              1113


Q ss_pred             ChhhHHHHhcCCCCHHHHHHHHhccCCCCccccccccccccc
Q psy2648         357 APLDTKALVGLGYSRSEIEESLSQAKYDDPESDGSRSGSSLS  398 (708)
Q Consensus       357 ~~~~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~y~~l~~~~~  398 (708)
                      +...+..|..+|+..+++.++|..++||+..++|.++..+.+
T Consensus       330 ~~~r~~~m~~~G~~~~~i~~sL~~~k~d~i~a~y~ll~~~~~  371 (596)
T KOG0586|consen  330 LAKRILHMNSIGHRRLKIEESLAKQKFDDINATYLLLGYRKQ  371 (596)
T ss_pred             hhHHHHHHHhhccchhhHHHHHhhhhHHHHHHHHhhcchhhh
Confidence            445667899999999999999999999999999999987755


No 3  
>KOG4717|consensus
Probab=100.00  E-value=4.8e-61  Score=508.74  Aligned_cols=320  Identities=42%  Similarity=0.703  Sum_probs=282.2

Q ss_pred             CCCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC
Q psy2648          39 ERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK  118 (708)
Q Consensus        39 ~~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~  118 (708)
                      ..+...-|-|.+.++||+|.|++|.+|+|.-||++||||+|+|++++......+++|++.|+.++|||||+||+++.++.
T Consensus        11 i~DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQT   90 (864)
T KOG4717|consen   11 IYDGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQT   90 (864)
T ss_pred             ccccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccc
Confidence            34555678899999999999999999999999999999999999988777778999999999999999999999999999


Q ss_pred             EEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEc-CCCcEEEEeccCccccC
Q psy2648         119 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD-SEMNIKIADFGFSNEFT  196 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld-~~~~iKL~DFGls~~~~  196 (708)
                      .+|||+|+-.+|+|++||.++ ..+.|+.++.||+||+.|+.|||+..+|||||||||+.+- +-|-|||+|||+++.|.
T Consensus        91 KlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~  170 (864)
T KOG4717|consen   91 KLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ  170 (864)
T ss_pred             eEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence            999999999999999999887 5699999999999999999999999999999999998765 56899999999999999


Q ss_pred             CCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q psy2648         197 PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL  276 (708)
Q Consensus       197 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li  276 (708)
                      ++.++.+.||++.|.|||++.|..|+.|++||||||||||.|+||++||+..+..+...+|+..+|.+|.++|.+|+|||
T Consensus       171 PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI  250 (864)
T KOG4717|consen  171 PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLI  250 (864)
T ss_pred             CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhCCCCCCCHHHHh---hhhhCCCCcccCCCCCCCccCCCCCCCCCCccccccccchhhhhhhhhhhccCCCCCCc
Q psy2648         277 KKFLVLNPAKRASLEVSG---EVTLGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASIKENTARLNAGRPAKNT  353 (708)
Q Consensus       277 ~~~L~~dP~~Rps~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  353 (708)
                      ..||..||.+|.++|+|.   |++-+..+..      +.         .| -..+.+.-.+                   
T Consensus       251 ~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~s------T~---------iP-Lvsr~~L~ee-------------------  295 (864)
T KOG4717|consen  251 QSMLVRDPKKRASLEEIVSTSWLQAGDRGLS------TA---------IP-LVSRHHLPEE-------------------  295 (864)
T ss_pred             HHHHhcCchhhccHHHHhccccccCCCCCcc------cc---------Cc-eeehhhCChH-------------------
Confidence            999999999999999997   9875543221      00         01 0111110000                   


Q ss_pred             CCCChhhHHHHhc-CCCCHHHHHHHHhccCCCCcccccccccc
Q psy2648         354 ASIAPLDTKALVG-LGYSRSEIEESLSQAKYDDPESDGSRSGS  395 (708)
Q Consensus       354 ~~~~~~~~~~~~~-~g~~~~~i~~~l~~~~~~~~~~~y~~l~~  395 (708)
                        -...|++.|.. .=-+.++|.+.|.+++||+++|+|+||..
T Consensus       296 --~Ha~IIq~Mv~G~IAs~e~Il~aLe~n~YNhiTATYfLLAE  336 (864)
T KOG4717|consen  296 --AHATIIQQMVAGAIASEEDILRALENNEYNHITATYFLLAE  336 (864)
T ss_pred             --HHHHHHHHHhcccccCHHHHHHHHhccccchhhhHHHHHHH
Confidence              02356667764 34578999999999999999999999854


No 4  
>KOG0598|consensus
Probab=100.00  E-value=9.8e-59  Score=481.11  Aligned_cols=247  Identities=41%  Similarity=0.705  Sum_probs=232.2

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  120 (708)
                      ...+.+|++++.||+|+||+||+++++.|++.||+|+++|..+- ..+.+....|..||..++||+||+|+..|++...+
T Consensus        21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL  100 (357)
T KOG0598|consen   21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL  100 (357)
T ss_pred             cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence            45577999999999999999999999999999999999988763 34677889999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcccc-CCCC
Q psy2648         121 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGN  199 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~-~~~~  199 (708)
                      |||+||+.||+|+.+|.+++.++|+.|+.|+.+|+.||.|||++|||||||||||||||.+|+|+|+|||||+.. ..+.
T Consensus       101 ylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~  180 (357)
T KOG0598|consen  101 YLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD  180 (357)
T ss_pred             EEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999865 4456


Q ss_pred             CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHH
Q psy2648         200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLLKK  278 (708)
Q Consensus       200 ~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~~  278 (708)
                      ...++|||+.|||||++.+..|+ .++|||||||++|+|++|..||.+.+..+++++|..++ ...|..++.++++||++
T Consensus       181 ~t~tfcGT~eYmAPEil~~~gy~-~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~  259 (357)
T KOG0598|consen  181 ATRTFCGTPEYMAPEILLGKGYD-KAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKK  259 (357)
T ss_pred             ccccccCCccccChHHHhcCCCC-cccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHH
Confidence            77889999999999999999986 89999999999999999999999999999999999999 45666799999999999


Q ss_pred             hhhhCCCCCCC
Q psy2648         279 FLVLNPAKRAS  289 (708)
Q Consensus       279 ~L~~dP~~Rps  289 (708)
                      +|..||++|..
T Consensus       260 LL~rdp~~RLg  270 (357)
T KOG0598|consen  260 LLKRDPRQRLG  270 (357)
T ss_pred             HhccCHHHhcC
Confidence            99999999974


No 5  
>KOG0615|consensus
Probab=100.00  E-value=5.7e-59  Score=485.48  Aligned_cols=257  Identities=38%  Similarity=0.666  Sum_probs=232.2

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChh-----hHHHHHHHHHHHHhCCCCCeeeEEEEEEe
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG-----SLQKLFREVRIMKMLDHPNIVKLFQVIET  116 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~-----~~~~~~~Ei~il~~l~HpnIv~l~~~~~~  116 (708)
                      +...+.|.+.++||+|+||.|.+|..+.||+.||||+|++.+....     ....+.+|++||++|+|||||+++++|+.
T Consensus       168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~  247 (475)
T KOG0615|consen  168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV  247 (475)
T ss_pred             chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec
Confidence            3455679999999999999999999999999999999998764321     22335799999999999999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCC---CcEEEEeccCcc
Q psy2648         117 EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSN  193 (708)
Q Consensus       117 ~~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~---~~iKL~DFGls~  193 (708)
                      .+..||||||++||+|++++..++.+.|+..+.+|+||+.||.|||++||+|||||||||||..+   -.+||+|||+|+
T Consensus       248 ~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK  327 (475)
T KOG0615|consen  248 PDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAK  327 (475)
T ss_pred             CCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhh
Confidence            99999999999999999999999999999999999999999999999999999999999999876   679999999999


Q ss_pred             ccCCCCCccccccCCcccccccccCCc--cCCCchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHcCCCCC-C---C
Q psy2648         194 EFTPGNKLDTFCGSPPYAAPELFQGKK--YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRE-LRERVLRGKYRI-P---F  266 (708)
Q Consensus       194 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~--~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~-l~~~i~~~~~~~-p---~  266 (708)
                      ....++.++|+||||.|.|||++.+..  +++.++|||||||+||.+++|.+||.+..... +.+.|.+|.|.+ |   .
T Consensus       328 ~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~  407 (475)
T KOG0615|consen  328 VSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWD  407 (475)
T ss_pred             ccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhh
Confidence            988888999999999999999997654  34458999999999999999999999876554 999999999875 3   2


Q ss_pred             CCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         267 YMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       267 ~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                      .+|+++.+||++||.+||++|||+++++   |+..
T Consensus       408 ~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~  442 (475)
T KOG0615|consen  408 RISEEALDLINWMLVVDPENRPSADEALNHPWFKD  442 (475)
T ss_pred             hhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhc
Confidence            4789999999999999999999999988   8874


No 6  
>KOG0583|consensus
Probab=100.00  E-value=2.5e-57  Score=493.97  Aligned_cols=258  Identities=49%  Similarity=0.861  Sum_probs=242.8

Q ss_pred             CCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC---hhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEe
Q psy2648          41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN---PGSLQKLFREVRIMKMLD-HPNIVKLFQVIET  116 (708)
Q Consensus        41 ~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~---~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~  116 (708)
                      ....+++|++.+.||+|+||+|++|.+..+++.||||+++++...   ....+.+.+|+.+|+.+. ||||+++++++++
T Consensus        12 ~~~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t   91 (370)
T KOG0583|consen   12 LQLSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT   91 (370)
T ss_pred             cccccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec
Confidence            346688999999999999999999999999999999998876332   123456678999999999 9999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCC-CcEEEEeccCcccc
Q psy2648         117 EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE-MNIKIADFGFSNEF  195 (708)
Q Consensus       117 ~~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~-~~iKL~DFGls~~~  195 (708)
                      ...+|||||||.||+|+++|...+++.|.+++.+|+||++||+|||++||+||||||||||+|.+ +++||+|||+++..
T Consensus        92 ~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~  171 (370)
T KOG0583|consen   92 PTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS  171 (370)
T ss_pred             CCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999 99999999999988


Q ss_pred             -CCCCCccccccCCcccccccccCCc-cCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCC-CHHH
Q psy2648         196 -TPGNKLDTFCGSPPYAAPELFQGKK-YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYM-STDC  272 (708)
Q Consensus       196 -~~~~~~~~~~Gt~~Y~APE~l~~~~-~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~-s~~~  272 (708)
                       ..+..+.+.|||+.|+|||++.+.. |++.++|||||||+||.|++|++||++.+...++.+|.++.+.+|.++ |+++
T Consensus       172 ~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~S~~~  251 (370)
T KOG0583|consen  172 PGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLLSPEA  251 (370)
T ss_pred             CCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcCCHHH
Confidence             5677899999999999999999988 999999999999999999999999999999999999999999999999 9999


Q ss_pred             HHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         273 ENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       273 ~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                      .+||.+||..||.+|+++++++   |++.
T Consensus       252 ~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  252 RSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            9999999999999999999998   8875


No 7  
>KOG0611|consensus
Probab=100.00  E-value=2.3e-58  Score=477.24  Aligned_cols=256  Identities=49%  Similarity=0.872  Sum_probs=243.7

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      .-+|++.++||+|.||+|.+|.....|+.||||.|+|+.+. ..++-.+.+||+||..|+|||||++|++|+..+.+.||
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv  131 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV  131 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence            45899999999999999999999999999999999998774 45677889999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccc
Q psy2648         124 MEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT  203 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~  203 (708)
                      |||+.+|+|++||.+.+.|+|.+++.+|+||++|+.|||+++++|||||.||||||.++++||+||||++.+..+..+.+
T Consensus       132 MEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqT  211 (668)
T KOG0611|consen  132 MEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQT  211 (668)
T ss_pred             EEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhC
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN  283 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~d  283 (708)
                      +||+|.|++||++.|.+|.|+.+|-|||||+||.|+.|..||+|.+...+..+|.+|.|+-|.. +.++.-||+.||.+|
T Consensus       212 FCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~-PSdA~gLIRwmLmVN  290 (668)
T KOG0611|consen  212 FCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPET-PSDASGLIRWMLMVN  290 (668)
T ss_pred             hcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCC-CchHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999999999999999999998864 567899999999999


Q ss_pred             CCCCCCHHHHh---hhhhCCC
Q psy2648         284 PAKRASLEVSG---EVTLGGA  301 (708)
Q Consensus       284 P~~Rps~~~~~---~~~~~~~  301 (708)
                      |++|.|+++|.   |++++..
T Consensus       291 P~RRATieDiAsHWWvNwgy~  311 (668)
T KOG0611|consen  291 PERRATIEDIASHWWVNWGYN  311 (668)
T ss_pred             cccchhHHHHhhhheeecccc
Confidence            99999999998   7776543


No 8  
>KOG0575|consensus
Probab=100.00  E-value=1.2e-56  Score=489.29  Aligned_cols=256  Identities=37%  Similarity=0.678  Sum_probs=241.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      .+|+..+.||+|+|++||.+++..+|+.||+|++.+..+ .+...+++.+||+|.+.|+|||||++|++||+.+++|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            469999999999999999999999999999999998765 4567788999999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDT  203 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~  203 (708)
                      |+|..++|..++++++.++|.+|+.|++||+.||.|||+++|+|||||..||||+++.+|||+|||||..+. ++++-.|
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~T  177 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKT  177 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccce
Confidence            999999999999989999999999999999999999999999999999999999999999999999999886 4477889


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhC
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN  283 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~d  283 (708)
                      .||||.|+|||++....+ +..+||||+|||||.||+|++||+..+.++.+.+|....|.+|.++|.++++||.+||+.|
T Consensus       178 lCGTPNYIAPEVl~k~gH-sfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~  256 (592)
T KOG0575|consen  178 LCGTPNYIAPEVLNKSGH-SFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRPN  256 (592)
T ss_pred             ecCCCcccChhHhccCCC-CCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHHHHhcCC
Confidence            999999999999997775 5899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCHHHHh---hhhhCCCC
Q psy2648         284 PAKRASLEVSG---EVTLGGAP  302 (708)
Q Consensus       284 P~~Rps~~~~~---~~~~~~~~  302 (708)
                      |.+|||+++++   |+..+..|
T Consensus       257 P~~Rpsl~~vL~h~Ff~~g~~p  278 (592)
T KOG0575|consen  257 PSERPSLDEVLDHPFFKSGFTP  278 (592)
T ss_pred             cccCCCHHHHhcCHhhhCCCcC
Confidence            99999999998   66544443


No 9  
>KOG0595|consensus
Probab=100.00  E-value=2e-56  Score=467.34  Aligned_cols=251  Identities=43%  Similarity=0.741  Sum_probs=237.0

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEE
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~y  121 (708)
                      ...+++|.+.+.||+|+||+||+|+|+.++..||||.|.+..++++..+.+..|+.||+.|+|||||+|++++++.+.+|
T Consensus         6 ~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~   85 (429)
T KOG0595|consen    6 MRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIY   85 (429)
T ss_pred             ccccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEE
Confidence            45689999999999999999999999999999999999999888888888999999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCC------CcEEEEeccCcccc
Q psy2648         122 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE------MNIKIADFGFSNEF  195 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~------~~iKL~DFGls~~~  195 (708)
                      ||||||.||||.+||..++.++|..++.++.||+.||++||+++||||||||+||||+..      -.+||+|||+|+.+
T Consensus        86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L  165 (429)
T KOG0595|consen   86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL  165 (429)
T ss_pred             EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence            999999999999999999999999999999999999999999999999999999999875      35899999999999


Q ss_pred             CCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHH
Q psy2648         196 TPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP---FYMSTDC  272 (708)
Q Consensus       196 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p---~~~s~~~  272 (708)
                      .++..+.+.||||.|||||+++...|+ .|+|+||+|+|||+|++|+.||+..+..++...+..+...+|   ...+.++
T Consensus       166 ~~~~~a~tlcGSplYMAPEV~~~~~Yd-AKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~  244 (429)
T KOG0595|consen  166 QPGSMAETLCGSPLYMAPEVIMSQQYD-AKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPL  244 (429)
T ss_pred             CchhHHHHhhCCccccCHHHHHhcccc-chhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCch
Confidence            999999999999999999999999997 689999999999999999999999999999999999876544   4678889


Q ss_pred             HHHHHHhhhhCCCCCCCHHHH
Q psy2648         273 ENLLKKFLVLNPAKRASLEVS  293 (708)
Q Consensus       273 ~~Li~~~L~~dP~~Rps~~~~  293 (708)
                      .+|+..+|..||.+|.++++-
T Consensus       245 ~~Ll~~ll~~~~~~~~~~~~~  265 (429)
T KOG0595|consen  245 RELLISLLQRNPKDRISFEDF  265 (429)
T ss_pred             hhhhhHHHhcCccccCchHHh
Confidence            999999999999999998753


No 10 
>KOG0616|consensus
Probab=100.00  E-value=1.4e-56  Score=450.56  Aligned_cols=243  Identities=40%  Similarity=0.730  Sum_probs=231.2

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEE
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~y  121 (708)
                      -.+.+|+++++||.|+||+|.+++++.+|..||+|++++... .-++.+...+|.++|+.+.||++|+|++.+.+.+.+|
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly  120 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY  120 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence            668899999999999999999999999999999999998764 3456677889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc
Q psy2648         122 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL  201 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~  201 (708)
                      |||||++||+|+.++++.++++|..|+.|+.||+.||+|||+++|++|||||||||||++|.+||+|||+++....  .+
T Consensus       121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~--rT  198 (355)
T KOG0616|consen  121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG--RT  198 (355)
T ss_pred             EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC--cE
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999987653  37


Q ss_pred             cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhh
Q psy2648         202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLV  281 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~  281 (708)
                      .+.||||.|+|||+++.+.| +.++|+|||||++|||+.|..||.+.+..+++++|+.+++.+|.+.+++++|||+++|+
T Consensus       199 ~TlCGTPeYLAPEii~sk~y-nkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~  277 (355)
T KOG0616|consen  199 WTLCGTPEYLAPEIIQSKGY-NKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQ  277 (355)
T ss_pred             EEecCCccccChHHhhcCCC-CcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHh
Confidence            78999999999999999998 58999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCC
Q psy2648         282 LNPAKRA  288 (708)
Q Consensus       282 ~dP~~Rp  288 (708)
                      +|-.+|.
T Consensus       278 vD~t~R~  284 (355)
T KOG0616|consen  278 VDLTKRF  284 (355)
T ss_pred             hhhHhhh
Confidence            9999994


No 11 
>KOG0592|consensus
Probab=100.00  E-value=7.2e-54  Score=460.28  Aligned_cols=251  Identities=36%  Similarity=0.638  Sum_probs=232.1

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCCh-hhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEE
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP-GSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~  120 (708)
                      ..+.+|.+++.||+|+|++|++|+.+.++++||||++.|..+-. ...+-+.+|-.+|.+| .||.||+||..|+++..+
T Consensus        70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL  149 (604)
T KOG0592|consen   70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL  149 (604)
T ss_pred             CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence            44668999999999999999999999999999999999876533 3344577899999999 799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q psy2648         121 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK  200 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~  200 (708)
                      |+|+||+++|+|+++|.+.|.|+|..++.|+.||+.||+|||++|||||||||||||||.+|++||+|||-++.+.+...
T Consensus       150 YFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~  229 (604)
T KOG0592|consen  150 YFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQK  229 (604)
T ss_pred             EEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999987643211


Q ss_pred             --------------ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy2648         201 --------------LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF  266 (708)
Q Consensus       201 --------------~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~  266 (708)
                                    ..+++||..|.+||++..... ++.+|||+||||||.|+.|.+||.+.+.--+.++|+.-.|.+|.
T Consensus       230 ~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~-~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~  308 (604)
T KOG0592|consen  230 SQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPA-GPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPE  308 (604)
T ss_pred             cccCccCcccccCcccceeeeecccCHHHhcCCCC-CcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCC
Confidence                          145899999999999987764 68999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         267 YMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       267 ~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ..+++++|||+++|..||.+|+|+++|+
T Consensus       309 ~fp~~a~dLv~KLLv~dp~~Rlt~~qIk  336 (604)
T KOG0592|consen  309 GFPEDARDLIKKLLVRDPSDRLTSQQIK  336 (604)
T ss_pred             CCCHHHHHHHHHHHccCccccccHHHHh
Confidence            9999999999999999999999999987


No 12 
>KOG0603|consensus
Probab=100.00  E-value=4.1e-55  Score=479.88  Aligned_cols=526  Identities=24%  Similarity=0.352  Sum_probs=364.1

Q ss_pred             EEcccCceEEEEEEE---cCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEEEEeccC
Q psy2648          53 TIGKGNFAKVKLAKH---VPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEKTLYLVMEYAS  128 (708)
Q Consensus        53 ~LG~G~fg~V~la~~---~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ylVmEy~~  128 (708)
                      ++|+|+||+|++++.   ...|..||+|+.++.............|..++...+ ||++|+++..++++...|++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            379999999999763   356788999999887654333335567888998887 9999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccccccCC
Q psy2648         129 GGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP  208 (708)
Q Consensus       129 gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~~Gt~  208 (708)
                      ||+|+..+.....+.+...+.+...++.|++++|+.+|+|||+|++||+++.+|++|+.|||+++........   |||.
T Consensus        81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~---cgt~  157 (612)
T KOG0603|consen   81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA---CGTY  157 (612)
T ss_pred             cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc---ccch
Confidence            9999999988888999999999999999999999999999999999999999999999999999877554333   9999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA  288 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp  288 (708)
                      .|||||++.+.   ..++|+|||||++|+|++|..||.+    ++..+|.+.+..+|..++.++++++.+|+..+|.+|.
T Consensus       158 eymApEI~~gh---~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrL  230 (612)
T KOG0603|consen  158 EYRAPEIINGH---LSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPRELSAEARSLFRQLFKRNPENRL  230 (612)
T ss_pred             hhhhhHhhhcc---CCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHHHHh
Confidence            99999999843   3689999999999999999999987    7788899989999999999999999999999999998


Q ss_pred             CH--HHHhhhhhCCCCcccCCCCCCCccCCCCCCCCCCccccccccchhhhhhhhhhhccCCCCCCcCCCChhhHHHHhc
Q psy2648         289 SL--EVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASIKENTARLNAGRPAKNTASIAPLDTKALVG  366 (708)
Q Consensus       289 s~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  366 (708)
                      ..  +.+..+.....-..-.+.....+..++.+.|..........+|+    +.+..-....|.-.+.   ........+
T Consensus       231 g~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~fd~----eft~~~P~dsp~~~~~---~s~~~if~g  303 (612)
T KOG0603|consen  231 GAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITERDVAQFDP----EFTSQVPADSPLLSAS---GSDHTIFSG  303 (612)
T ss_pred             ccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccchhhhhhcCc----hhccCCcccCCCCCCC---ccccchhcC
Confidence            65  22222111100000000000122222223222111000001111    0011111111110000   000001111


Q ss_pred             CCCCHHHHHHHHhccCCCCcccccccccccccccCCCCCCCCCCCCCCCCCCccccccCCCCCccccCCCCCCCCCCcCC
Q psy2648         367 LGYSRSEIEESLSQAKYDDPESDGSRSGSSLSLRNLQPGSGGGATGGSGSSRSWRNMQPGSGGVATGGSGGGGGGGAAQS  446 (708)
Q Consensus       367 ~g~~~~~i~~~l~~~~~~~~~~~y~~l~~~~~~~~~~p~~~~~~~~~~g~s~~~~~~~~~~~g~~~~~~~ggg~~g~v~s  446 (708)
                      .-|-...+.+......   .+..|.+                                        ....|.|    +++
T Consensus       304 ~sfva~~il~~~~~~~---~~~~y~~----------------------------------------~~~~~~g----s~s  336 (612)
T KOG0603|consen  304 PSFVAPGVLEDAVTAP---FTESYEF----------------------------------------REELGEG----SFS  336 (612)
T ss_pred             CCccChHHhhccccCC---cchhhcc----------------------------------------ccccCCC----Ccc
Confidence            1111111111100000   0000100                                        0111111    223


Q ss_pred             Ccccccccccccc--------------ccCcccccccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHH
Q psy2648         447 PSHRGVHRSISAS--------------NAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEK  512 (708)
Q Consensus       447 ~~hr~~~R~i~~~--------------~~~~~~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~  512 (708)
                      +++++.+......              ...+...-...|+||+++++++.+..+.|+|||++.|+.|.+.+.....+. .
T Consensus       337 ~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~-~  415 (612)
T KOG0603|consen  337 AVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFC-S  415 (612)
T ss_pred             ceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcchhH-H
Confidence            4444444432221              111112234589999999999999999999999999999999998877666 8


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCccCCCCCCCeee-cCCCCEEEeeccCccccCCCCcccccccCCcccccccccCCCCccC
Q psy2648         513 EARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL-DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTS  591 (708)
Q Consensus       513 ~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl-~~~~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~  591 (708)
                      ++..|++||+.|+.|||++|||||||||+|||+ +..++++|+|||+++.....  ..+.|-|..|.|||++....+...
T Consensus       416 e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~--~~tp~~t~~y~APEvl~~~~yt~a  493 (612)
T KOG0603|consen  416 EASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS--CDTPALTLQYVAPEVLAIQEYTEA  493 (612)
T ss_pred             HHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh--hcccchhhcccChhhhccCCCCcc
Confidence            888999999999999999999999999999999 58999999999999987655  556688999999999995555555


Q ss_pred             CCCCCCCCcccCCCCCCCc------c---cc--ccc---cccccchhhhHHHHhhCCCCCCCCCCCCc
Q psy2648         592 SGGAGTNHTHNSSISPAPT------N---FK--RQN---TIDSASIKENTARLNAGRPAKNTASIAPL  645 (708)
Q Consensus       592 s~~~~~~~~~~~~~~~~~~------~---~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  645 (708)
                      ++-|+.+-..+.+..+...      +   ..  +.-   .-.|-.+|+++..|+.=.|++|++...-.
T Consensus       494 cD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~  561 (612)
T KOG0603|consen  494 CDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIG  561 (612)
T ss_pred             hhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccccccCHHHHHHHHHhccCChhhCcChhhhc
Confidence            5444433333322211111      1   11  111   23378899999999999999999876543


No 13 
>KOG0694|consensus
Probab=100.00  E-value=4.5e-53  Score=465.83  Aligned_cols=247  Identities=35%  Similarity=0.659  Sum_probs=233.0

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCE
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEKT  119 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~  119 (708)
                      ...+.+|.++++||+|+||+|++|..+.+++.||||+++|..+ ..++++..+.|.+|+...+ ||++++||..|+++++
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            5667899999999999999999999999999999999999864 5677888999999998886 9999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CC
Q psy2648         120 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PG  198 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~  198 (708)
                      +|+||||+.|||+ .+++..+.|+|..|+.|+++|+.||+|||++||||||||.+|||||.+|++||+||||++... .+
T Consensus       444 l~fvmey~~Ggdm-~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g  522 (694)
T KOG0694|consen  444 LFFVMEYVAGGDL-MHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQG  522 (694)
T ss_pred             EEEEEEecCCCcE-EEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCC
Confidence            9999999999994 445556899999999999999999999999999999999999999999999999999999764 67


Q ss_pred             CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q psy2648         199 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKK  278 (708)
Q Consensus       199 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~  278 (708)
                      ..+.|+||||.|||||++.+..|. .++|||||||+|||||.|+.||.+.+.+++...|+...+.+|.++|.|+.++|++
T Consensus       523 ~~TsTfCGTpey~aPEil~e~~Yt-~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~  601 (694)
T KOG0694|consen  523 DRTSTFCGTPEFLAPEVLTEQSYT-RAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRR  601 (694)
T ss_pred             CccccccCChhhcChhhhccCccc-chhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHH
Confidence            788999999999999999999995 8999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhCCCCCCCH
Q psy2648         279 FLVLNPAKRASL  290 (708)
Q Consensus       279 ~L~~dP~~Rps~  290 (708)
                      ||.+||++|...
T Consensus       602 ll~k~p~kRLG~  613 (694)
T KOG0694|consen  602 LLRKNPEKRLGS  613 (694)
T ss_pred             HhccCcccccCC
Confidence            999999999976


No 14 
>KOG0581|consensus
Probab=100.00  E-value=4.1e-52  Score=431.81  Aligned_cols=251  Identities=30%  Similarity=0.522  Sum_probs=231.2

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC-EEEE
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK-TLYL  122 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-~~yl  122 (708)
                      .....+.++.||+|+.|+|++|+|+.|++.+|+|+|. ...++...+++.+|++|++..+|||||.+|++|..+. .++|
T Consensus        77 ~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~-~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI  155 (364)
T KOG0581|consen   77 SLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVIL-LNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISI  155 (364)
T ss_pred             CHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeec-ccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEe
Confidence            3457888999999999999999999999999999994 3456677788999999999999999999999999999 5999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc
Q psy2648         123 VMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL  201 (708)
Q Consensus       123 VmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~-~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~  201 (708)
                      +||||.+|+|.+.+...++++|.....++.||+.||.|||+ ++||||||||+|||++..|.|||||||.|+..... ..
T Consensus       156 ~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-~a  234 (364)
T KOG0581|consen  156 CMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-IA  234 (364)
T ss_pred             ehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-hc
Confidence            99999999999999988999999999999999999999995 99999999999999999999999999999877644 67


Q ss_pred             cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHHcCCC-CCCCC-CCHHHHH
Q psy2648         202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS-----TLRELRERVLRGKY-RIPFY-MSTDCEN  274 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~-----~~~~l~~~i~~~~~-~~p~~-~s~~~~~  274 (708)
                      +++.||..|||||.+.+..|. .++||||||+.++||++|++||...     +..+++..|..+.. .+|.. .|+++++
T Consensus       235 ~tfvGT~~YMsPERi~g~~Ys-~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~  313 (364)
T KOG0581|consen  235 NTFVGTSAYMSPERISGESYS-VKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRS  313 (364)
T ss_pred             ccccccccccChhhhcCCcCC-cccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHH
Confidence            899999999999999999986 7899999999999999999999874     78899999998754 57876 9999999


Q ss_pred             HHHHhhhhCCCCCCCHHHHh---hhh
Q psy2648         275 LLKKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                      ||.+||++||.+|+++++++   |+.
T Consensus       314 FV~~CL~Kdp~~R~s~~qLl~Hpfi~  339 (364)
T KOG0581|consen  314 FVSCCLRKDPSERPSAKQLLQHPFIK  339 (364)
T ss_pred             HHHHHhcCCcccCCCHHHHhcCHHHh
Confidence            99999999999999999987   665


No 15 
>KOG0605|consensus
Probab=100.00  E-value=3.8e-52  Score=447.63  Aligned_cols=260  Identities=33%  Similarity=0.592  Sum_probs=232.1

Q ss_pred             cccCCCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEE
Q psy2648          36 SRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVI  114 (708)
Q Consensus        36 ~~~~~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~  114 (708)
                      .+..+....+++|++++.||+|+||.||+|+.+.||+.||+|+++|..+ ...+++.+..|-.||...++|+||+||..|
T Consensus       131 lR~~R~r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF  210 (550)
T KOG0605|consen  131 LRLRRTRLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF  210 (550)
T ss_pred             HHhccccCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe
Confidence            3344456678899999999999999999999999999999999998865 456778899999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccc
Q psy2648         115 ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE  194 (708)
Q Consensus       115 ~~~~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~  194 (708)
                      ++..++||||||++|||+..+|...+.|+|+.+++|+.+++.|++.||+.|+|||||||+|+|||..|++||+|||||+.
T Consensus       211 QD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~g  290 (550)
T KOG0605|consen  211 QDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTG  290 (550)
T ss_pred             cCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999853


Q ss_pred             cCC----------------------CCC--------------------------ccccccCCcccccccccCCccCCCch
Q psy2648         195 FTP----------------------GNK--------------------------LDTFCGSPPYAAPELFQGKKYDGPEV  226 (708)
Q Consensus       195 ~~~----------------------~~~--------------------------~~~~~Gt~~Y~APE~l~~~~~~~~~~  226 (708)
                      +..                      ...                          ..+.+|||.|||||++.+..| +..+
T Consensus       291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY-~~~c  369 (550)
T KOG0605|consen  291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGY-GKEC  369 (550)
T ss_pred             hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCC-Cccc
Confidence            210                      000                          123579999999999999998 4899


Q ss_pred             hHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCCHHHHHHHHHhhhhCCCCCCC---HHHHh---hh
Q psy2648         227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK--YRIPF--YMSTDCENLLKKFLVLNPAKRAS---LEVSG---EV  296 (708)
Q Consensus       227 DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~--~~~p~--~~s~~~~~Li~~~L~~dP~~Rps---~~~~~---~~  296 (708)
                      ||||||||+||||.|.+||.+.++.+.+.+|...+  +.+|.  ..++++.|||.+||+ ||++|..   +++|+   |+
T Consensus       370 DwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF  448 (550)
T KOG0605|consen  370 DWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFF  448 (550)
T ss_pred             cHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCcc
Confidence            99999999999999999999999999999999876  45553  578999999999999 9999986   67776   65


Q ss_pred             h
Q psy2648         297 T  297 (708)
Q Consensus       297 ~  297 (708)
                      .
T Consensus       449 ~  449 (550)
T KOG0605|consen  449 K  449 (550)
T ss_pred             c
Confidence            4


No 16 
>KOG0591|consensus
Probab=100.00  E-value=2.2e-53  Score=424.31  Aligned_cols=248  Identities=29%  Similarity=0.563  Sum_probs=226.3

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEE-EEEeCCE-
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQ-VIETEKT-  119 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~-~~~~~~~-  119 (708)
                      ......|+|++.||+|+||+||++++..+|+.||.|.|+-..++.+..+....|+.+|++|+|||||++|+ .|..++. 
T Consensus        15 ~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~ev   94 (375)
T KOG0591|consen   15 QKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEV   94 (375)
T ss_pred             cccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchh
Confidence            44566799999999999999999999999999999999877778788888999999999999999999998 4544444 


Q ss_pred             EEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH--CC--ceecCCCCCCEEEcCCCcEEEEeccC
Q psy2648         120 LYLVMEYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQ--KK--IIHRDLKAENLLLDSEMNIKIADFGF  191 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH~--~g--IvHRDLKPeNILld~~~~iKL~DFGl  191 (708)
                      ++||||||.+|||.+.|+.    +..++|..++.+|.|++.||.+||+  ..  |+||||||.||+|+.+|.+||.||||
T Consensus        95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL  174 (375)
T KOG0591|consen   95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGL  174 (375)
T ss_pred             hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchh
Confidence            9999999999999998853    3569999999999999999999999  44  99999999999999999999999999


Q ss_pred             ccccCCCC-CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC-CC-CCC
Q psy2648         192 SNEFTPGN-KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR-IP-FYM  268 (708)
Q Consensus       192 s~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~-~p-~~~  268 (708)
                      ++.+.... ...+.+|||.||+||.+.+.+|+ +++||||+||++|||+.-+.||.+.+..++.++|..|.++ +| .+.
T Consensus       175 ~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~-~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~Y  253 (375)
T KOG0591|consen  175 GRFLSSKTTFAHSLVGTPYYMSPERIHESGYN-FKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHY  253 (375)
T ss_pred             HhHhcchhHHHHhhcCCCcccCHHHHhcCCCC-cchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHh
Confidence            99886543 35678999999999999999996 8999999999999999999999999999999999999986 78 689


Q ss_pred             CHHHHHHHHHhhhhCCCCCCCH
Q psy2648         269 STDCENLLKKFLVLNPAKRASL  290 (708)
Q Consensus       269 s~~~~~Li~~~L~~dP~~Rps~  290 (708)
                      |.++..||..|+.+||+.||+.
T Consensus       254 S~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  254 STDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             hhHHHHHHHHHccCCcccCCCc
Confidence            9999999999999999999983


No 17 
>KOG0585|consensus
Probab=100.00  E-value=8.4e-52  Score=437.59  Aligned_cols=259  Identities=41%  Similarity=0.679  Sum_probs=228.4

Q ss_pred             CCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChh------------hHHHHHHHHHHHHhCCCCCe
Q psy2648          40 RDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG------------SLQKLFREVRIMKMLDHPNI  107 (708)
Q Consensus        40 ~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~------------~~~~~~~Ei~il~~l~HpnI  107 (708)
                      .....+++|++++.||+|.||+|.+|++..+++.||||++.|......            ..+++.+||.||+++.||||
T Consensus        91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV  170 (576)
T KOG0585|consen   91 QDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV  170 (576)
T ss_pred             ccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe
Confidence            344567899999999999999999999999999999999987643211            23578899999999999999


Q ss_pred             eeEEEEEEeC--CEEEEEEeccCCCChHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcE
Q psy2648         108 VKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI  184 (708)
Q Consensus       108 v~l~~~~~~~--~~~ylVmEy~~gg~L~~~i~~~~~-l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~i  184 (708)
                      |+|+++..+.  +.+|||+|||..|.+.. .-..+. +++.+|+.|++.++.||+|||.+|||||||||.|+||+.+|++
T Consensus       171 V~LiEvLDDP~s~~~YlVley~s~G~v~w-~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~V  249 (576)
T KOG0585|consen  171 VKLIEVLDDPESDKLYLVLEYCSKGEVKW-CPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTV  249 (576)
T ss_pred             eEEEEeecCcccCceEEEEEeccCCcccc-CCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcE
Confidence            9999999875  57999999999998754 222344 8999999999999999999999999999999999999999999


Q ss_pred             EEEeccCccccCCC------CCccccccCCcccccccccC---CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q psy2648         185 KIADFGFSNEFTPG------NKLDTFCGSPPYAAPELFQG---KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRE  255 (708)
Q Consensus       185 KL~DFGls~~~~~~------~~~~~~~Gt~~Y~APE~l~~---~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~  255 (708)
                      ||+|||.+..+..+      ..+....|||.|+|||++.+   ..|++.+.||||+||+||.|+.|++||.+....+++.
T Consensus       250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~  329 (576)
T KOG0585|consen  250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFD  329 (576)
T ss_pred             EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHH
Confidence            99999999876333      23445789999999999987   5678899999999999999999999999999999999


Q ss_pred             HHHcCCCCCCCC--CCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhhC
Q psy2648         256 RVLRGKYRIPFY--MSTDCENLLKKFLVLNPAKRASLEVSG---EVTLG  299 (708)
Q Consensus       256 ~i~~~~~~~p~~--~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~~  299 (708)
                      +|......+|..  +.++++|||.+||++||++|+++.++.   |+...
T Consensus       330 KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  330 KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence            999999888876  689999999999999999999999987   76543


No 18 
>KOG0033|consensus
Probab=100.00  E-value=4.5e-53  Score=414.50  Aligned_cols=255  Identities=38%  Similarity=0.659  Sum_probs=237.5

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYL  122 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~yl  122 (708)
                      ..-+.|++.+.||+|.|+.|+++.|..||+.+|+|+|+-..+.....+++.+|++|-+.|+|||||+|.+.+..+...||
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl   87 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL   87 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence            34467999999999999999999999999999999999887777788899999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCC---CcEEEEeccCccccCCCC
Q psy2648         123 VMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       123 VmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~---~~iKL~DFGls~~~~~~~  199 (708)
                      |+|++.|++|+.-|..+--++|..+..+++||++||.|||.+||||||+||+|+||...   .-+||+|||++.....+.
T Consensus        88 vFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~  167 (355)
T KOG0033|consen   88 VFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE  167 (355)
T ss_pred             EEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc
Confidence            99999999999989888889999999999999999999999999999999999999754   348999999999988777


Q ss_pred             CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHH
Q psy2648         200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENL  275 (708)
Q Consensus       200 ~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~----~~s~~~~~L  275 (708)
                      ....+.|||.|||||++...+|. ..+|||++|||||-|+.|++||.+++...++++|..|.|.+|.    .+++++++|
T Consensus       168 ~~~G~~GtP~fmaPEvvrkdpy~-kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~L  246 (355)
T KOG0033|consen  168 AWHGFAGTPGYLSPEVLKKDPYS-KPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSL  246 (355)
T ss_pred             ccccccCCCcccCHHHhhcCCCC-CcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHH
Confidence            78889999999999999999984 7899999999999999999999999999999999999998875    578999999


Q ss_pred             HHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         276 LKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       276 i~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                      |++||..||.+|+|+.+.+   |+..
T Consensus       247 vrrML~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  247 IRRMLTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             HHHHhccChhhhccHHHHhCCchhcc
Confidence            9999999999999999887   7753


No 19 
>KOG0690|consensus
Probab=100.00  E-value=1.7e-51  Score=416.53  Aligned_cols=262  Identities=36%  Similarity=0.607  Sum_probs=240.9

Q ss_pred             hhchhccccccCCCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCC
Q psy2648          28 LMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPN  106 (708)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~Hpn  106 (708)
                      .|.-...............+|..++.||+|.||+|-+|+.+.+++.||||+++|.-+ ..+++...+.|-++|+.-+||+
T Consensus       150 ~m~i~~t~~~~~~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPF  229 (516)
T KOG0690|consen  150 EMSIAETEEAKRKNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPF  229 (516)
T ss_pred             eeeecccccccccceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcH
Confidence            333333334445556678899999999999999999999999999999999998754 4566677889999999999999


Q ss_pred             eeeEEEEEEeCCEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEE
Q psy2648         107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKI  186 (708)
Q Consensus       107 Iv~l~~~~~~~~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL  186 (708)
                      +..|-..|++++++|+||||+.||+|+-++.....++|+.++.|..+|++||.|||+++||+||||.||+|||++|+|||
T Consensus       230 Lt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKi  309 (516)
T KOG0690|consen  230 LTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKI  309 (516)
T ss_pred             HHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEe
Confidence            99999999999999999999999999999999899999999999999999999999999999999999999999999999


Q ss_pred             EeccCcccc-CCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy2648         187 ADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP  265 (708)
Q Consensus       187 ~DFGls~~~-~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p  265 (708)
                      +||||++.- ..+....++||||.|+|||++....| +.++|||.+||++|||+||++||...+...+.+.|+.+..++|
T Consensus       310 tDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDY-graVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFP  388 (516)
T KOG0690|consen  310 TDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDY-GRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFP  388 (516)
T ss_pred             eecccchhcccccceeccccCChhhcCchhhccccc-cceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCC
Confidence            999999864 56678899999999999999999988 5899999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHhhhhCCCCCCCH
Q psy2648         266 FYMSTDCENLLKKFLVLNPAKRASL  290 (708)
Q Consensus       266 ~~~s~~~~~Li~~~L~~dP~~Rps~  290 (708)
                      ..+|++++.|+..+|.+||.+|..-
T Consensus       389 r~ls~eAktLLsGLL~kdP~kRLGg  413 (516)
T KOG0690|consen  389 RTLSPEAKTLLSGLLKKDPKKRLGG  413 (516)
T ss_pred             ccCCHHHHHHHHHHhhcChHhhcCC
Confidence            9999999999999999999999863


No 20 
>KOG0597|consensus
Probab=100.00  E-value=1.4e-50  Score=434.24  Aligned_cols=247  Identities=36%  Similarity=0.635  Sum_probs=235.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      .+|.+.+.||+|+||.||+|+.+.|.+.||||.++|...+.++++.+.+|++|++.|+|||||.++++|++..++|+|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            57999999999999999999999999999999999988888889999999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Ccccc
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~~  204 (708)
                      ||.| +|+.+|...+.++|+.++.+..|+++||.|||+++|+|||+||.||||+..|.+|+||||+++....+. .+...
T Consensus        82 ~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsi  160 (808)
T KOG0597|consen   82 YAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSI  160 (808)
T ss_pred             hhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeec
Confidence            9998 999999999999999999999999999999999999999999999999999999999999999876543 34567


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCC
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNP  284 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP  284 (708)
                      .|||.|||||++.+.+|+ ..+|+||||||+|||++|++||......++.+.|.......|...|.++.+||+.+|.+||
T Consensus       161 kGtPlYmAPElv~e~pyd-~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP  239 (808)
T KOG0597|consen  161 KGTPLYMAPELVEEQPYD-HTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQGLLIKDP  239 (808)
T ss_pred             cCcccccCHHHHcCCCcc-chhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHhhcCh
Confidence            899999999999999997 6899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHh
Q psy2648         285 AKRASLEVSG  294 (708)
Q Consensus       285 ~~Rps~~~~~  294 (708)
                      .+|.+..++.
T Consensus       240 ~~RltW~~Ll  249 (808)
T KOG0597|consen  240 AQRLTWTDLL  249 (808)
T ss_pred             hhcccHHHHh
Confidence            9999998766


No 21 
>KOG0580|consensus
Probab=100.00  E-value=1.8e-50  Score=396.14  Aligned_cols=258  Identities=36%  Similarity=0.618  Sum_probs=238.4

Q ss_pred             cCCCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChh-hHHHHHHHHHHHHhCCCCCeeeEEEEEEe
Q psy2648          38 RERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG-SLQKLFREVRIMKMLDHPNIVKLFQVIET  116 (708)
Q Consensus        38 ~~~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~~~~~~  116 (708)
                      .....-.+++|++++.||+|-||.||+|+.+.++-.||+|++.|+++... ..+.+.+|++|...|+||||+++|++|.+
T Consensus        14 ~~~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd   93 (281)
T KOG0580|consen   14 RATKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD   93 (281)
T ss_pred             ccccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec
Confidence            34445568899999999999999999999999999999999998875433 33457799999999999999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccc
Q psy2648         117 EKTLYLVMEYASGGEVFDYLV--LHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE  194 (708)
Q Consensus       117 ~~~~ylVmEy~~gg~L~~~i~--~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~  194 (708)
                      +..+||++||++.|+|+..+.  ...+++|..+..|+.|++.||.|||.++||||||||||+|++.++.+||+|||-+..
T Consensus        94 ~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~  173 (281)
T KOG0580|consen   94 SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVH  173 (281)
T ss_pred             cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceee
Confidence            999999999999999999998  567899999999999999999999999999999999999999999999999999865


Q ss_pred             cCCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHH
Q psy2648         195 FTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCEN  274 (708)
Q Consensus       195 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~  274 (708)
                      - +.++-.+.|||..|.+||+..+..++ ..+|+|++||+.||++.|..||...+..+++++|.+-++.+|..++.+++|
T Consensus       174 ~-p~~kR~tlcgt~dyl~pEmv~~~~hd-~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~d  251 (281)
T KOG0580|consen  174 A-PSNKRKTLCGTLDYLPPEMVEGRGHD-KFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAAD  251 (281)
T ss_pred             c-CCCCceeeecccccCCHhhcCCCCcc-chhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHH
Confidence            3 36667889999999999999999987 789999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhCCCCCCCHHHHh---hhh
Q psy2648         275 LLKKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                      ||.+||.++|.+|.++.+++   |+.
T Consensus       252 lI~~ll~~~p~~r~~l~~v~~hpwI~  277 (281)
T KOG0580|consen  252 LISRLLVKNPIERLALTEVMDHPWIV  277 (281)
T ss_pred             HHHHHhccCccccccHHHHhhhHHHH
Confidence            99999999999999999988   664


No 22 
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00  E-value=9.5e-48  Score=414.68  Aligned_cols=252  Identities=34%  Similarity=0.611  Sum_probs=229.2

Q ss_pred             CCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC
Q psy2648          40 RDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK  118 (708)
Q Consensus        40 ~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~  118 (708)
                      .....+++|++.+.||+|+||.||+|++..+++.||||++.+... .....+.+.+|+.+|+.++||||+++++++.+++
T Consensus        12 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   91 (329)
T PTZ00263         12 TSSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN   91 (329)
T ss_pred             cCCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC
Confidence            344457899999999999999999999999999999999976532 2234567889999999999999999999999999


Q ss_pred             EEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC
Q psy2648         119 TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG  198 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~  198 (708)
                      .+|+||||+.+|+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... 
T Consensus        92 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~-  170 (329)
T PTZ00263         92 RVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD-  170 (329)
T ss_pred             EEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC-
Confidence            9999999999999999999888999999999999999999999999999999999999999999999999999976543 


Q ss_pred             CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q psy2648         199 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKK  278 (708)
Q Consensus       199 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~  278 (708)
                       ...+.+||+.|+|||++.+..++ .++|||||||++|+|++|..||.+.+..++.+.+..+...+|...+.++++||++
T Consensus       171 -~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~  248 (329)
T PTZ00263        171 -RTFTLCGTPEYLAPEVIQSKGHG-KAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKG  248 (329)
T ss_pred             -CcceecCChhhcCHHHHcCCCCC-CcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHH
Confidence             23457899999999999988774 8999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhCCCCCCC-----HHHHh
Q psy2648         279 FLVLNPAKRAS-----LEVSG  294 (708)
Q Consensus       279 ~L~~dP~~Rps-----~~~~~  294 (708)
                      ||+.||.+|++     +++++
T Consensus       249 ~L~~dP~~R~~~~~~~~~~ll  269 (329)
T PTZ00263        249 LLQTDHTKRLGTLKGGVADVK  269 (329)
T ss_pred             HhhcCHHHcCCCCCCCHHHHh
Confidence            99999999997     57766


No 23 
>KOG0593|consensus
Probab=100.00  E-value=4.9e-49  Score=396.65  Aligned_cols=248  Identities=30%  Similarity=0.524  Sum_probs=213.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++|+.+..+|+|+||.||+|+++.||+.||||++.....++...+-.+||+++|++|.|||+|.|.++|.....+|+|+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            47999999999999999999999999999999997666556556667899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccc
Q psy2648         126 YASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDT  203 (708)
Q Consensus       126 y~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~  203 (708)
                      ||...-| +-+... ..++++.++.|+.|++.|+.|||+++|||||||||||||+.+|.+||||||+|+... ++.....
T Consensus        82 ~~dhTvL-~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTD  160 (396)
T KOG0593|consen   82 YCDHTVL-HELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTD  160 (396)
T ss_pred             ecchHHH-HHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhh
Confidence            9987444 444443 579999999999999999999999999999999999999999999999999999887 6777778


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc--------------CC-----CCC
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR--------------GK-----YRI  264 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~--------------~~-----~~~  264 (708)
                      ++.|..|.|||++.|....|+.+||||+||++.||++|..-|.+.+.-+..-.|..              ..     .++
T Consensus       161 YVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~l  240 (396)
T KOG0593|consen  161 YVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRL  240 (396)
T ss_pred             hhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeec
Confidence            89999999999999965558999999999999999999999998754433323321              11     112


Q ss_pred             CC------------CCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         265 PF------------YMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       265 p~------------~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      |.            ..+.-+.||+++||..||++|++.++++
T Consensus       241 P~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll  282 (396)
T KOG0593|consen  241 PEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL  282 (396)
T ss_pred             CCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence            21            2455688999999999999999999876


No 24 
>KOG0032|consensus
Probab=100.00  E-value=2.6e-47  Score=415.56  Aligned_cols=255  Identities=42%  Similarity=0.697  Sum_probs=233.3

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCE
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEKT  119 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~  119 (708)
                      +..-..|++.+.||+|.||.||+|+++.||+.||+|+|.+.... ....+.+.+|+.||++|. |||||+++++|++...
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~  110 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS  110 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence            33445799999999999999999999999999999999987653 334567889999999999 9999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCC----CcEEEEeccCcccc
Q psy2648         120 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE----MNIKIADFGFSNEF  195 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~----~~iKL~DFGls~~~  195 (708)
                      +|+|||+|.||+|++.|... .++|.++..+++||+.|++|||+.||+||||||||+|+...    +.+|++|||++...
T Consensus       111 ~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~  189 (382)
T KOG0032|consen  111 VYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI  189 (382)
T ss_pred             EEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence            99999999999999999877 59999999999999999999999999999999999999744    47999999999988


Q ss_pred             CCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHH
Q psy2648         196 TPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTD  271 (708)
Q Consensus       196 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~----~~s~~  271 (708)
                      ..+....+.||||.|+|||++.+..|. ..+||||+||++|.|++|..||.+.+..+...+|..+++.++.    .+|..
T Consensus       190 ~~~~~~~~~~Gtp~y~APEvl~~~~y~-~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~  268 (382)
T KOG0032|consen  190 KPGERLHTIVGTPEYVAPEVLGGRPYG-DEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISES  268 (382)
T ss_pred             cCCceEeeecCCccccCchhhcCCCCC-cccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHH
Confidence            877788999999999999999988884 8999999999999999999999999999999999999887643    46899


Q ss_pred             HHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         272 CENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       272 ~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                      +++||++||..||.+|+|+.+++   |+..
T Consensus       269 akd~i~~ll~~dp~~R~ta~~~L~HpWi~~  298 (382)
T KOG0032|consen  269 AKDFIRKLLEFDPRKRLTAAQALQHPWIKS  298 (382)
T ss_pred             HHHHHHHhcccCcccCCCHHHHhcCccccC
Confidence            99999999999999999999987   7653


No 25 
>KOG0599|consensus
Probab=100.00  E-value=1.1e-48  Score=388.61  Aligned_cols=251  Identities=39%  Similarity=0.690  Sum_probs=226.2

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-----Ch-hhHHHHHHHHHHHHhC-CCCCeeeEEEEEEe
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-----NP-GSLQKLFREVRIMKML-DHPNIVKLFQVIET  116 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-----~~-~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~  116 (708)
                      ....|.-.+.||+|..+.|.+|.|+.+|+++|+|+|.-..-     +. ...+...+|+.||+++ .||+||+|.++|++
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES   94 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence            34578888999999999999999999999999999975321     11 2234556899999987 59999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC
Q psy2648         117 EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT  196 (708)
Q Consensus       117 ~~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~  196 (708)
                      +..+++|+|.|+.|+|+||+...-.++|.+++.+++||+.|++|||.++||||||||||||+|++.+|||+|||+++.+.
T Consensus        95 ~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~  174 (411)
T KOG0599|consen   95 DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLE  174 (411)
T ss_pred             cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccccCCcccccccccCCccC-----CCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC--CC--C
Q psy2648         197 PGNKLDTFCGSPPYAAPELFQGKKYD-----GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--PF--Y  267 (708)
Q Consensus       197 ~~~~~~~~~Gt~~Y~APE~l~~~~~~-----~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~--p~--~  267 (708)
                      ++.++...||||.|+|||.+...-|.     +..+|+||+|||||.|+.|..||......-+...|..|+|.+  |.  .
T Consensus       175 ~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWad  254 (411)
T KOG0599|consen  175 PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWAD  254 (411)
T ss_pred             CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhh
Confidence            99999999999999999998643222     468999999999999999999998877777889999999876  43  4


Q ss_pred             CCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         268 MSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       268 ~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .|.+.+|||++||++||.+|+|.++.+
T Consensus       255 is~~~KdLIsrlLqVdp~~Ritake~L  281 (411)
T KOG0599|consen  255 ISATVKDLISRLLQVDPTKRITAKEAL  281 (411)
T ss_pred             ccccHHHHHHHHHeeCchhcccHHHHh
Confidence            688999999999999999999999887


No 26 
>KOG0610|consensus
Probab=100.00  E-value=1.7e-47  Score=400.23  Aligned_cols=256  Identities=31%  Similarity=0.539  Sum_probs=228.2

Q ss_pred             cCCCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEe
Q psy2648          38 RERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDHPNIVKLFQVIET  116 (708)
Q Consensus        38 ~~~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~  116 (708)
                      .......+..|++++.||+|.-|+||+|+.+.++..+|+|+|+|..+. .+...++..|.+||+.++||+++.||..|++
T Consensus        69 ~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet  148 (459)
T KOG0610|consen   69 SKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFET  148 (459)
T ss_pred             cCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeec
Confidence            344556677899999999999999999999999999999999988764 4556778899999999999999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccc
Q psy2648         117 EKTLYLVMEYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE  194 (708)
Q Consensus       117 ~~~~ylVmEy~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~  194 (708)
                      ++..|+|||||+||||....+++  +.++|..|++|+.+++.||+|||-.|||+||||||||||.++|+|-|+||-|+..
T Consensus       149 ~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~  228 (459)
T KOG0610|consen  149 DKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLR  228 (459)
T ss_pred             cceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeecccccc
Confidence            99999999999999999988765  4799999999999999999999999999999999999999999999999998743


Q ss_pred             cCC---------------------------------C-C-----------------------CccccccCCccccccccc
Q psy2648         195 FTP---------------------------------G-N-----------------------KLDTFCGSPPYAAPELFQ  217 (708)
Q Consensus       195 ~~~---------------------------------~-~-----------------------~~~~~~Gt~~Y~APE~l~  217 (708)
                      ...                                 . .                       ...+++||-.|+|||++.
T Consensus       229 ~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~  308 (459)
T KOG0610|consen  229 CPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIR  308 (459)
T ss_pred             CCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeee
Confidence            210                                 0 0                       113467999999999999


Q ss_pred             CCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHhhhhCCCCCCC----HH
Q psy2648         218 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF--YMSTDCENLLKKFLVLNPAKRAS----LE  291 (708)
Q Consensus       218 ~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~--~~s~~~~~Li~~~L~~dP~~Rps----~~  291 (708)
                      |... +.++|||+|||+||||+.|..||.|.+.++....|+.....+|.  .++..|+|||+++|.+||.+|..    +.
T Consensus       309 G~GH-gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~  387 (459)
T KOG0610|consen  309 GEGH-GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAA  387 (459)
T ss_pred             cCCC-CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchH
Confidence            9886 58999999999999999999999999999999999998888875  46789999999999999999998    56


Q ss_pred             HHh
Q psy2648         292 VSG  294 (708)
Q Consensus       292 ~~~  294 (708)
                      +|+
T Consensus       388 eIK  390 (459)
T KOG0610|consen  388 EIK  390 (459)
T ss_pred             Hhh
Confidence            666


No 27 
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00  E-value=2.4e-47  Score=403.96  Aligned_cols=249  Identities=34%  Similarity=0.612  Sum_probs=226.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ++|++.+.||+|+||.||+|.+..+++.||||++..... .....+.+.+|+.+|+.++||||+++++++.+...+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            479999999999999999999999999999999975432 2234456789999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF  204 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~  204 (708)
                      ||+++|+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....  .....
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~--~~~~~  158 (291)
T cd05612          81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD--RTWTL  158 (291)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC--Ccccc
Confidence            9999999999999888999999999999999999999999999999999999999999999999999876543  23456


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCC
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNP  284 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP  284 (708)
                      +||+.|+|||++.+..++ .++|||||||++|+|++|..||.+.+..++.+.+..+...+|...++++++||++||+.||
T Consensus       159 ~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dp  237 (291)
T cd05612         159 CGTPEYLAPEVIQSKGHN-KAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLVVDR  237 (291)
T ss_pred             cCChhhcCHHHHcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHHcCCCH
Confidence            899999999999888764 7999999999999999999999999999999999999999998899999999999999999


Q ss_pred             CCCCC-----HHHHh---hhh
Q psy2648         285 AKRAS-----LEVSG---EVT  297 (708)
Q Consensus       285 ~~Rps-----~~~~~---~~~  297 (708)
                      .+|++     +++++   |+.
T Consensus       238 ~~R~~~~~~~~~~~l~h~~~~  258 (291)
T cd05612         238 TRRLGNMKNGADDVKNHRWFK  258 (291)
T ss_pred             HHccCCccCCHHHHhcCcccc
Confidence            99995     77776   664


No 28 
>KOG0198|consensus
Probab=100.00  E-value=1.7e-47  Score=402.97  Aligned_cols=248  Identities=31%  Similarity=0.523  Sum_probs=214.9

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC--EEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK--TLYL  122 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~yl  122 (708)
                      .-+|..++.||+|+||.||++.+..+|+.+|||.+.....  ...+.+.+|+++|++|+|||||++++......  .++|
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~--~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i   93 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS--PTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI   93 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccc--hhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence            4578999999999999999999999999999999976622  12567889999999999999999999754444  6999


Q ss_pred             EEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcC-CCcEEEEeccCccccCC---
Q psy2648         123 VMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS-EMNIKIADFGFSNEFTP---  197 (708)
Q Consensus       123 VmEy~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~-~~~iKL~DFGls~~~~~---  197 (708)
                      .|||+++|+|.+++...+ .++|..++.+.+||+.||.|||++|||||||||+|||++. ++.+||+|||+++....   
T Consensus        94 ~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~  173 (313)
T KOG0198|consen   94 FMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT  173 (313)
T ss_pred             eeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence            999999999999999887 7999999999999999999999999999999999999999 79999999999987653   


Q ss_pred             -CCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHcCC--CCCCCCCCHHHH
Q psy2648         198 -GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-STLRELRERVLRGK--YRIPFYMSTDCE  273 (708)
Q Consensus       198 -~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~-~~~~~l~~~i~~~~--~~~p~~~s~~~~  273 (708)
                       ........||+.|||||++.......+++|||||||++.||+||+.||.. ....+..-++....  +.+|..+|++++
T Consensus       174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~  253 (313)
T KOG0198|consen  174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAK  253 (313)
T ss_pred             cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHH
Confidence             22234678999999999998533334689999999999999999999987 44444444444443  568889999999


Q ss_pred             HHHHHhhhhCCCCCCCHHHHh
Q psy2648         274 NLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       274 ~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +||.+||.+||++|||+++++
T Consensus       254 ~Fl~~C~~~~p~~Rpta~eLL  274 (313)
T KOG0198|consen  254 DFLRKCFKRDPEKRPTAEELL  274 (313)
T ss_pred             HHHHHHhhcCcccCcCHHHHh
Confidence            999999999999999999887


No 29 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00  E-value=4.4e-47  Score=408.31  Aligned_cols=242  Identities=37%  Similarity=0.607  Sum_probs=220.8

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGG  130 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg  130 (708)
                      +.||+|+||.||+|++..+|+.||||++.+... .......+.+|+++|+.++||||++++++++..+.+||||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            469999999999999999999999999986533 2344567789999999999999999999999999999999999999


Q ss_pred             ChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccccccCCc
Q psy2648         131 EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPP  209 (708)
Q Consensus       131 ~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~~~Gt~~  209 (708)
                      +|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++... .+......+||+.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~  160 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCcc
Confidence            999999988899999999999999999999999999999999999999999999999999987532 2334456789999


Q ss_pred             ccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCC-
Q psy2648         210 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA-  288 (708)
Q Consensus       210 Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp-  288 (708)
                      |+|||++.+..++ .++|||||||++|+|++|..||.+.+...+...+..+...+|..+++++.+||++||+.||++|| 
T Consensus       161 y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~  239 (323)
T cd05571         161 YLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLG  239 (323)
T ss_pred             ccChhhhcCCCCC-ccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCC
Confidence            9999999888774 79999999999999999999999999999999999888899999999999999999999999999 


Q ss_pred             ----CHHHHh
Q psy2648         289 ----SLEVSG  294 (708)
Q Consensus       289 ----s~~~~~  294 (708)
                          ++++++
T Consensus       240 ~~~~~~~~ll  249 (323)
T cd05571         240 GGPEDAKEIM  249 (323)
T ss_pred             CCCCCHHHHH
Confidence                677776


No 30 
>KOG0600|consensus
Probab=100.00  E-value=2e-47  Score=407.73  Aligned_cols=251  Identities=31%  Similarity=0.581  Sum_probs=220.1

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--CEE
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE--KTL  120 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~  120 (708)
                      ...+.|+.+++||+|.||.||+|++..||+.||+|.+..+...++...-..|||.||++|+|||||+|.++....  ..+
T Consensus       114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si  193 (560)
T KOG0600|consen  114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI  193 (560)
T ss_pred             cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence            345689999999999999999999999999999999998877677777788999999999999999999998776  689


Q ss_pred             EEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         121 YLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      |||+|||+. ||.-++...+ .|++.+++.|++||+.||+|||++||+|||||..|||||++|++||+|||||+.+....
T Consensus       194 YlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~  272 (560)
T KOG0600|consen  194 YLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG  272 (560)
T ss_pred             EEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence            999999986 8887776533 79999999999999999999999999999999999999999999999999999876544


Q ss_pred             --CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc--C--------CCCCCC-
Q psy2648         200 --KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR--G--------KYRIPF-  266 (708)
Q Consensus       200 --~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~--~--------~~~~p~-  266 (708)
                        .+...+-|+.|.|||++.|..-.++++|+||+||||.||++|++.|.+.+.-+-..+|.+  |        ...+|. 
T Consensus       273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~  352 (560)
T KOG0600|consen  273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHA  352 (560)
T ss_pred             CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcc
Confidence              466778899999999999987668999999999999999999999999887665566542  1        112231 


Q ss_pred             ------------------CCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         267 ------------------YMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       267 ------------------~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                        .++..+.+|+..||.+||.+|.|+.+++
T Consensus       353 ~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL  398 (560)
T KOG0600|consen  353 TIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSAL  398 (560)
T ss_pred             cccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHh
Confidence                              3577889999999999999999999877


No 31 
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00  E-value=2e-46  Score=406.67  Aligned_cols=251  Identities=31%  Similarity=0.583  Sum_probs=227.1

Q ss_pred             CCCccCCeEEEeEEcccCceEEEEEEEcCCC-cEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC
Q psy2648          41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTG-KEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK  118 (708)
Q Consensus        41 ~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg-~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~  118 (708)
                      ....+++|++.+.||+|+||.||+|.+..++ ..||||++.+... .....+.+.+|+.+|+.++||||+++++++.+++
T Consensus        25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~  104 (340)
T PTZ00426         25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES  104 (340)
T ss_pred             CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC
Confidence            4456778999999999999999999977665 6899999976432 2334567889999999999999999999999999


Q ss_pred             EEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC
Q psy2648         119 TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG  198 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~  198 (708)
                      .+|+||||+++|+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... 
T Consensus       105 ~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~-  183 (340)
T PTZ00426        105 YLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT-  183 (340)
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC-
Confidence            9999999999999999999888999999999999999999999999999999999999999999999999999976542 


Q ss_pred             CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q psy2648         199 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKK  278 (708)
Q Consensus       199 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~  278 (708)
                       ...+.+||+.|+|||++.+..++ .++|||||||++|+|++|..||.+.+...+.+.+..+...+|...++++.++|++
T Consensus       184 -~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~  261 (340)
T PTZ00426        184 -RTYTLCGTPEYIAPEILLNVGHG-KAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHLMKK  261 (340)
T ss_pred             -CcceecCChhhcCHHHHhCCCCC-ccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence             23467899999999999887764 7999999999999999999999999999999999999888999999999999999


Q ss_pred             hhhhCCCCCC-----CHHHHh
Q psy2648         279 FLVLNPAKRA-----SLEVSG  294 (708)
Q Consensus       279 ~L~~dP~~Rp-----s~~~~~  294 (708)
                      ||+.||.+|+     ++++++
T Consensus       262 ~l~~dp~~R~~~~~~~~~~~~  282 (340)
T PTZ00426        262 LLSHDLTKRYGNLKKGAQNVK  282 (340)
T ss_pred             HcccCHHHcCCCCCCCHHHHH
Confidence            9999999995     788876


No 32 
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00  E-value=4e-46  Score=401.97  Aligned_cols=242  Identities=38%  Similarity=0.625  Sum_probs=220.0

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGG  130 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg  130 (708)
                      +.||+|+||.||+|++..+++.||||++.+... .......+.+|+++|+.++||||++++++++..+.+||||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            469999999999999999999999999986543 2345567889999999999999999999999999999999999999


Q ss_pred             ChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC-CCCccccccCCc
Q psy2648         131 EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSPP  209 (708)
Q Consensus       131 ~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~-~~~~~~~~Gt~~  209 (708)
                      +|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... .......+||+.
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~  160 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPE  160 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcC
Confidence            9999998888899999999999999999999999999999999999999999999999999875322 233456789999


Q ss_pred             ccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCC-
Q psy2648         210 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA-  288 (708)
Q Consensus       210 Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp-  288 (708)
                      |+|||++.+..+ +.++|||||||++|+|++|..||.+.+..++.+.+..+.+.+|..+++++.+||++||..||.+|+ 
T Consensus       161 y~aPE~~~~~~~-~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~  239 (328)
T cd05593         161 YLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLG  239 (328)
T ss_pred             ccChhhhcCCCC-CccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcCC
Confidence            999999988877 479999999999999999999999999889888998888889999999999999999999999997 


Q ss_pred             ----CHHHHh
Q psy2648         289 ----SLEVSG  294 (708)
Q Consensus       289 ----s~~~~~  294 (708)
                          ++++++
T Consensus       240 ~~~~~~~~il  249 (328)
T cd05593         240 GGPDDAKEIM  249 (328)
T ss_pred             CCCCCHHHHh
Confidence                788776


No 33 
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00  E-value=7.4e-46  Score=405.33  Aligned_cols=247  Identities=31%  Similarity=0.530  Sum_probs=216.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ++|++++.||+|+||+||+|++..+++.||||++.+... .......+.+|+.+++.++||||+++++.+++...+||||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            379999999999999999999999999999999976532 2334456788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-----
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-----  199 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-----  199 (708)
                      |||+||+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+....     
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~  160 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY  160 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence            999999999999988999999999999999999999999999999999999999999999999999987543210     


Q ss_pred             -------------------------------CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCC
Q psy2648         200 -------------------------------KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS  248 (708)
Q Consensus       200 -------------------------------~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~  248 (708)
                                                     ...+.+||+.|+|||++.+..++ .++|||||||++|+|++|..||.+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~-~~~DvwSlGvil~ell~G~~Pf~~~  239 (363)
T cd05628         161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYN-KLCDWWSLGVIMYEMLIGYPPFCSE  239 (363)
T ss_pred             ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCC-CchhhhhhHHHHHHHHhCCCCCCCC
Confidence                                           01346899999999999988875 7999999999999999999999999


Q ss_pred             CHHHHHHHHHcCC--CCCCC--CCCHHHHHHHHHhhhhCCCC---CCCHHHHh
Q psy2648         249 TLRELRERVLRGK--YRIPF--YMSTDCENLLKKFLVLNPAK---RASLEVSG  294 (708)
Q Consensus       249 ~~~~l~~~i~~~~--~~~p~--~~s~~~~~Li~~~L~~dP~~---Rps~~~~~  294 (708)
                      +..+...+|....  ..+|.  .+++++++||.+|+. +|.+   ||++++++
T Consensus       240 ~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~  291 (363)
T cd05628         240 TPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIK  291 (363)
T ss_pred             CHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHh
Confidence            9988888888643  34453  468999999999876 4554   57899887


No 34 
>KOG0192|consensus
Probab=100.00  E-value=5.5e-46  Score=402.05  Aligned_cols=247  Identities=29%  Similarity=0.505  Sum_probs=218.3

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcE-EEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC-EEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKE-VAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK-TLYL  122 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~-vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-~~yl  122 (708)
                      .....+.+.||+|+||+||++.++  |+. ||||++..........+.|.+|+.+|.+|+|||||++++++..+. .+.|
T Consensus        40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~i  117 (362)
T KOG0192|consen   40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCI  117 (362)
T ss_pred             hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEE
Confidence            445667777999999999999985  555 999999877666555778999999999999999999999998887 7999


Q ss_pred             EEeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCCCCEEEcCCC-cEEEEeccCccccCCC
Q psy2648         123 VMEYASGGEVFDYLVL--HGRMKEKEARAKFRQIVSAVQYCHQKK-IIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPG  198 (708)
Q Consensus       123 VmEy~~gg~L~~~i~~--~~~l~e~~~~~i~~QI~~aL~yLH~~g-IvHRDLKPeNILld~~~-~iKL~DFGls~~~~~~  198 (708)
                      ||||+++|+|.+++..  ...++...+..++.||+.||+|||+++ ||||||||+|||++.++ ++||+|||+++.....
T Consensus       118 VtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~  197 (362)
T KOG0192|consen  118 VTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS  197 (362)
T ss_pred             EEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence            9999999999999988  578999999999999999999999999 99999999999999998 9999999999876543


Q ss_pred             -CCccccccCCccccccccc--CCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHH
Q psy2648         199 -NKLDTFCGSPPYAAPELFQ--GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK--YRIPFYMSTDCE  273 (708)
Q Consensus       199 -~~~~~~~Gt~~Y~APE~l~--~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~--~~~p~~~s~~~~  273 (708)
                       .......||+.|||||++.  ...|+ .++|||||||+||||+||..||.+....++...+..+.  ..+|...++.+.
T Consensus       198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~-~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~  276 (362)
T KOG0192|consen  198 KTSMTSVAGTYRWMAPEVLRGEKSPYT-EKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLS  276 (362)
T ss_pred             cccccCCCCCccccChhhhcCCCCcCC-ccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHH
Confidence             3334478999999999999  55775 79999999999999999999999988877777776443  346777899999


Q ss_pred             HHHHHhhhhCCCCCCCHHHHh
Q psy2648         274 NLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       274 ~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .||.+||..||.+||++.++.
T Consensus       277 ~l~~~CW~~dp~~RP~f~ei~  297 (362)
T KOG0192|consen  277 SLMERCWLVDPSRRPSFLEIV  297 (362)
T ss_pred             HHHHHhCCCCCCcCCCHHHHH
Confidence            999999999999999999887


No 35 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00  E-value=9.8e-46  Score=390.29  Aligned_cols=247  Identities=26%  Similarity=0.428  Sum_probs=215.6

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      .|++.+.||+|+||.||+|.+..+++.||||++.+.... ......+.+|+++|+.++||||+++++++.+.+.+|+|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            489999999999999999999999999999999765432 2233457799999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccc
Q psy2648         126 YASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT  203 (708)
Q Consensus       126 y~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~  203 (708)
                      |+++|+|.+++...  ..+++..+..++.||+.||+|||+++|+||||||+|||+++++.+||+|||++...........
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG  160 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecC
Confidence            99999999887653  3689999999999999999999999999999999999999999999999999987654444556


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCH----HHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTL----RELRERVLRGKYRIPFYMSTDCENLLKKF  279 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~----~~l~~~i~~~~~~~p~~~s~~~~~Li~~~  279 (708)
                      .+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.+.    .++...+......+|...++++.+||++|
T Consensus       161 ~~g~~~y~aPE~~~~~~~~-~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~  239 (285)
T cd05631         161 RVGTVGYMAPEVINNEKYT-FSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRML  239 (285)
T ss_pred             CCCCCCccCHhhhcCCCCC-cccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHH
Confidence            7899999999999988875 789999999999999999999987543    34455555556667778899999999999


Q ss_pred             hhhCCCCCCC-----HHHHh
Q psy2648         280 LVLNPAKRAS-----LEVSG  294 (708)
Q Consensus       280 L~~dP~~Rps-----~~~~~  294 (708)
                      |..||.+||+     +++++
T Consensus       240 l~~~P~~R~~~~~~~~~~~~  259 (285)
T cd05631         240 LTKNPKERLGCRGNGAAGVK  259 (285)
T ss_pred             hhcCHHHhcCCCCCCHHHHh
Confidence            9999999997     56665


No 36 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00  E-value=5.4e-46  Score=397.72  Aligned_cols=236  Identities=34%  Similarity=0.602  Sum_probs=215.8

Q ss_pred             EcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCCh
Q psy2648          54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEV  132 (708)
Q Consensus        54 LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg~L  132 (708)
                      ||+|+||.||+|++..+++.||||++.+... .......+.+|+.+|+.++||||+++++++...+.+|+||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            6999999999999999999999999976432 334456778999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC-CCCccccccCCccc
Q psy2648         133 FDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYA  211 (708)
Q Consensus       133 ~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~-~~~~~~~~Gt~~Y~  211 (708)
                      .+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... .......+||+.|+
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~  160 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYL  160 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccC
Confidence            99999888999999999999999999999999999999999999999999999999999875432 23345678999999


Q ss_pred             ccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCCCH
Q psy2648         212 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRASL  290 (708)
Q Consensus       212 APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rps~  290 (708)
                      |||++.+..++ .++|||||||++|+|++|..||.+.+..++.+.+..+...+|...++++.+||.+||..||.+||++
T Consensus       161 aPE~~~~~~~~-~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~  238 (312)
T cd05585         161 APELLLGHGYT-KAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGY  238 (312)
T ss_pred             CHHHHcCCCCC-CccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCC
Confidence            99999988775 7899999999999999999999999999999999999999999999999999999999999999864


No 37 
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00  E-value=6.6e-46  Score=399.29  Aligned_cols=242  Identities=36%  Similarity=0.614  Sum_probs=219.3

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGG  130 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg  130 (708)
                      +.||+|+||.||+|++..+|+.||+|++.+... .......+.+|+++|+.++||||+++++++...+.+||||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            479999999999999999999999999976532 2344566788999999999999999999999999999999999999


Q ss_pred             ChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccccccCCc
Q psy2648         131 EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPP  209 (708)
Q Consensus       131 ~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~~~Gt~~  209 (708)
                      +|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++... ........+||+.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~  160 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcC
Confidence            999999888889999999999999999999999999999999999999999999999999987532 2233456789999


Q ss_pred             ccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCC-
Q psy2648         210 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA-  288 (708)
Q Consensus       210 Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp-  288 (708)
                      |+|||++.+..++ .++|||||||++|+|++|..||.+.+..++...+......+|..+++++.+||.+||..||.+|+ 
T Consensus       161 y~aPE~~~~~~~~-~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~  239 (323)
T cd05595         161 YLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLG  239 (323)
T ss_pred             cCCcccccCCCCC-chhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCC
Confidence            9999999888774 79999999999999999999999999999989998888889999999999999999999999998 


Q ss_pred             ----CHHHHh
Q psy2648         289 ----SLEVSG  294 (708)
Q Consensus       289 ----s~~~~~  294 (708)
                          ++.+++
T Consensus       240 ~~~~~~~~~l  249 (323)
T cd05595         240 GGPSDAKEVM  249 (323)
T ss_pred             CCCCCHHHHH
Confidence                677766


No 38 
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00  E-value=2.5e-45  Score=394.74  Aligned_cols=243  Identities=35%  Similarity=0.607  Sum_probs=220.4

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCC-CeeeEEEEEEeCCEEEEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHP-NIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~Hp-nIv~l~~~~~~~~~~ylVm  124 (708)
                      +|++++.||+|+||.||+|++..+++.||||++.+... .....+.+..|++++..++|+ +|+++++++...+.+|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            58999999999999999999999999999999986533 234456788999999999765 5889999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDT  203 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~  203 (708)
                      ||+++|+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.... .......
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRT  160 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceee
Confidence            999999999999888899999999999999999999999999999999999999999999999999987532 2333456


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhC
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN  283 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~d  283 (708)
                      .+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.+..++...+......+|...++++.+||++||..|
T Consensus       161 ~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~  239 (324)
T cd05587         161 FCGTPDYIAPEIIAYQPYG-KSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLTKH  239 (324)
T ss_pred             ecCCccccChhhhcCCCCC-cccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcC
Confidence            7899999999999988774 789999999999999999999999999999999999988899999999999999999999


Q ss_pred             CCCCCCH
Q psy2648         284 PAKRASL  290 (708)
Q Consensus       284 P~~Rps~  290 (708)
                      |.+|++.
T Consensus       240 P~~R~~~  246 (324)
T cd05587         240 PAKRLGC  246 (324)
T ss_pred             HHHcCCC
Confidence            9999986


No 39 
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00  E-value=1.2e-45  Score=396.86  Aligned_cols=238  Identities=36%  Similarity=0.659  Sum_probs=216.2

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||.||+|+++.+++.||||++.+... .....+.+..|+.+++.+ +||||+++++++++.+.+||||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            469999999999999999999999999976532 233456678899998876 699999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccccccCC
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~~~Gt~  208 (708)
                      |+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++... ........+||+
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTP  160 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCc
Confidence            9999999888899999999999999999999999999999999999999999999999999987542 233345678999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA  288 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp  288 (708)
                      .|+|||++.+..++ .++|||||||++|+|++|+.||.+.+..++.+.+..+...+|..++.++.+||++||+.||.+|+
T Consensus       161 ~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  239 (320)
T cd05590         161 DYIAPEILQEMLYG-PSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRL  239 (320)
T ss_pred             cccCHHHHcCCCCC-CccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHCC
Confidence            99999999887774 78999999999999999999999999999999999998889999999999999999999999999


Q ss_pred             CH
Q psy2648         289 SL  290 (708)
Q Consensus       289 s~  290 (708)
                      ++
T Consensus       240 ~~  241 (320)
T cd05590         240 GS  241 (320)
T ss_pred             CC
Confidence            97


No 40 
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=100.00  E-value=2.1e-45  Score=396.53  Aligned_cols=246  Identities=35%  Similarity=0.555  Sum_probs=219.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ++|++++.||+|+||.||+|++..+++.||||++.+.... ....+.+.+|+++|+.++||||++++++++..+.+||||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            4799999999999999999999999999999999865332 234556889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF  204 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~  204 (708)
                      ||+++|+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....  .....
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--~~~~~  158 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--YANSV  158 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc--ccCCc
Confidence            9999999999998888999999999999999999999999999999999999999999999999999876543  34567


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--CCCCC------CCCHHHHHHH
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK--YRIPF------YMSTDCENLL  276 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~--~~~p~------~~s~~~~~Li  276 (708)
                      +||+.|+|||++.+..++ .++|||||||++|+|++|..||.+.+..+....+....  ...|.      .+++++.+||
T Consensus       159 ~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li  237 (333)
T cd05600         159 VGSPDYMAPEVLRGKGYD-FTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLI  237 (333)
T ss_pred             ccCccccChhHhcCCCCC-CccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHH
Confidence            899999999999988775 79999999999999999999999998888877776543  22232      3589999999


Q ss_pred             HHhhhhCCCCCCCHHHHh
Q psy2648         277 KKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       277 ~~~L~~dP~~Rps~~~~~  294 (708)
                      .+||..+|.+||++++++
T Consensus       238 ~~~l~~~~~rr~s~~~ll  255 (333)
T cd05600         238 TKLINDPSRRFGSLEDIK  255 (333)
T ss_pred             HHHhhChhhhcCCHHHHH
Confidence            999999999999999987


No 41 
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00  E-value=1.7e-45  Score=402.07  Aligned_cols=247  Identities=31%  Similarity=0.568  Sum_probs=217.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      .+|++++.||+|+||.||+|++..+++.||||++.+... .......+.+|+.+|+.++||||++++++++++..+||||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            369999999999999999999999999999999976532 2334556788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-----
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-----  199 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-----  199 (708)
                      |||++|+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+....     
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~  160 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY  160 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence            999999999999988899999999999999999999999999999999999999999999999999986542211     


Q ss_pred             ----------------------------------CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCC
Q psy2648         200 ----------------------------------KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF  245 (708)
Q Consensus       200 ----------------------------------~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf  245 (708)
                                                        ...+.+||+.|+|||++.+..++ .++|||||||++|+|++|..||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~el~~G~~Pf  239 (364)
T cd05599         161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYN-KECDWWSLGVIMYEMLVGYPPF  239 (364)
T ss_pred             ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCC-CeeeeecchhHHHHhhcCCCCC
Confidence                                              11235799999999999888774 7999999999999999999999


Q ss_pred             CCCCHHHHHHHHHcCCC--CCCC--CCCHHHHHHHHHhhhhCCCCCCC---HHHHh
Q psy2648         246 DGSTLRELRERVLRGKY--RIPF--YMSTDCENLLKKFLVLNPAKRAS---LEVSG  294 (708)
Q Consensus       246 ~~~~~~~l~~~i~~~~~--~~p~--~~s~~~~~Li~~~L~~dP~~Rps---~~~~~  294 (708)
                      .+.+..+....+.....  .+|.  .+++++.+||++||. ||.+|++   +++++
T Consensus       240 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll  294 (364)
T cd05599         240 CSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIK  294 (364)
T ss_pred             CCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHh
Confidence            99988888888876543  3343  468999999999997 9999998   88876


No 42 
>KOG0661|consensus
Probab=100.00  E-value=9e-47  Score=400.13  Aligned_cols=250  Identities=30%  Similarity=0.506  Sum_probs=218.8

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCC-EEE
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEK-TLY  121 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~-~~y  121 (708)
                      ..++|.++++||.|+||.||+|+.+.+++.||||.++++...-++ .--+||+..|++|+ |||||+|++++.+.+ .+|
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee-~~nLREvksL~kln~hpniikL~Evi~d~~~~L~   86 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEE-CMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY   86 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHH-HHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence            356899999999999999999999999999999999877654322 23468999999999 999999999998877 999


Q ss_pred             EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q psy2648         122 LVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK  200 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~  200 (708)
                      ||||||.. +|++.++.++ .|+|.+++.|+.||+.||+|+|.+|+.||||||||||+.....|||+|||||+.......
T Consensus        87 fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP  165 (538)
T KOG0661|consen   87 FVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPP  165 (538)
T ss_pred             eeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCC
Confidence            99999975 8999998764 589999999999999999999999999999999999999888999999999999887777


Q ss_pred             ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-------------------CC
Q psy2648         201 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR-------------------GK  261 (708)
Q Consensus       201 ~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~-------------------~~  261 (708)
                      ...++.|..|.|||++....+.+.++||||+|||++|+.+-+.-|.|.+..+-+.+|..                   =.
T Consensus       166 YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mn  245 (538)
T KOG0661|consen  166 YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMN  245 (538)
T ss_pred             cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhc
Confidence            78889999999999998777777899999999999999999999999876554444432                   12


Q ss_pred             CCCCC-----------CCCHHHHHHHHHhhhhCCCCCCCHHHHhh
Q psy2648         262 YRIPF-----------YMSTDCENLLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       262 ~~~p~-----------~~s~~~~~Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      +++|.           ..+.++.+||.+||.+||.+|||+++++.
T Consensus       246 f~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~  290 (538)
T KOG0661|consen  246 FRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ  290 (538)
T ss_pred             cCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence            33332           36889999999999999999999999883


No 43 
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00  E-value=3.2e-45  Score=393.68  Aligned_cols=243  Identities=35%  Similarity=0.601  Sum_probs=220.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      +|++++.||+|+||.||+|++..+++.||||++.+... .....+.+..|.+++..+ +||+|+++++++++.+.+||||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            58999999999999999999999999999999986543 223345567888888877 5899999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDT  203 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~  203 (708)
                      ||+++|+|.+++...+.+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++... .......
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~  160 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKT  160 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcccc
Confidence            999999999999888899999999999999999999999999999999999999999999999999987543 2334456


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhC
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN  283 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~d  283 (708)
                      .+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.+..++.+.+......+|...+.++.+||.+||++|
T Consensus       161 ~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~l~~~  239 (323)
T cd05616         161 FCGTPDYIAPEIIAYQPYG-KSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKH  239 (323)
T ss_pred             CCCChhhcCHHHhcCCCCC-CccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHcccC
Confidence            7899999999999988875 799999999999999999999999999999999999988899999999999999999999


Q ss_pred             CCCCCCH
Q psy2648         284 PAKRASL  290 (708)
Q Consensus       284 P~~Rps~  290 (708)
                      |.+|++.
T Consensus       240 p~~R~~~  246 (323)
T cd05616         240 PGKRLGC  246 (323)
T ss_pred             HHhcCCC
Confidence            9999985


No 44 
>KOG0696|consensus
Probab=100.00  E-value=1.6e-46  Score=389.87  Aligned_cols=250  Identities=36%  Similarity=0.597  Sum_probs=231.2

Q ss_pred             CCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeC
Q psy2648          40 RDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETE  117 (708)
Q Consensus        40 ~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~  117 (708)
                      +.-....+|..+.+||+|+||+|.+|..+.|.+.||||+++|+-. ..++.+--+.|-++|.... -|++++|+..|++-
T Consensus       343 ~d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm  422 (683)
T KOG0696|consen  343 RDRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM  422 (683)
T ss_pred             ccceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh
Confidence            335566789999999999999999999999999999999998754 3455556678888887764 68999999999999


Q ss_pred             CEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcccc-C
Q psy2648         118 KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-T  196 (708)
Q Consensus       118 ~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~-~  196 (708)
                      +.+|+||||+.||+|.-+|++-|++.|..|..|+.+|+-||-|||++|||+||||.+|||||.+|+|||+|||+++.. .
T Consensus       423 DRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~  502 (683)
T KOG0696|consen  423 DRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF  502 (683)
T ss_pred             hheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999874 3


Q ss_pred             CCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q psy2648         197 PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL  276 (708)
Q Consensus       197 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li  276 (708)
                      .+..+.++||||.|+|||++..++| +.++||||+||+||||+.|+.||++++..++.+.|...+..+|..+|.++.+++
T Consensus       503 ~~~TTkTFCGTPdYiAPEIi~YqPY-gksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ic  581 (683)
T KOG0696|consen  503 DGVTTKTFCGTPDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAIC  581 (683)
T ss_pred             CCcceeeecCCCcccccceEEeccc-ccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHH
Confidence            5566789999999999999999998 589999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhCCCCCCCH
Q psy2648         277 KKFLVLNPAKRASL  290 (708)
Q Consensus       277 ~~~L~~dP~~Rps~  290 (708)
                      +.+|.+.|.+|...
T Consensus       582 kg~ltK~P~kRLGc  595 (683)
T KOG0696|consen  582 KGLLTKHPGKRLGC  595 (683)
T ss_pred             HHHhhcCCccccCC
Confidence            99999999999875


No 45 
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00  E-value=1e-45  Score=397.93  Aligned_cols=242  Identities=38%  Similarity=0.616  Sum_probs=219.3

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGG  130 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg  130 (708)
                      +.||+|+||.||+|++..+++.||||++.+... .......+.+|+++++.++||||++++++++....+||||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            469999999999999999999999999986543 2334556788999999999999999999999999999999999999


Q ss_pred             ChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccccccCC
Q psy2648         131 EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSP  208 (708)
Q Consensus       131 ~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~-~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~~~Gt~  208 (708)
                      +|.+++.....+++.+++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+++... ........+||+
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP  160 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCc
Confidence            999999888899999999999999999999997 799999999999999999999999999987532 233445678999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA  288 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp  288 (708)
                      .|+|||++.+..++ .++|||||||+||+|++|..||.+.+..++.+.+......+|...++++.+||++||+.||++|+
T Consensus       161 ~y~aPE~~~~~~~~-~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~  239 (325)
T cd05594         161 EYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRL  239 (325)
T ss_pred             ccCCHHHHccCCCC-CccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhC
Confidence            99999999888774 79999999999999999999999999999999998888899999999999999999999999997


Q ss_pred             -----CHHHHh
Q psy2648         289 -----SLEVSG  294 (708)
Q Consensus       289 -----s~~~~~  294 (708)
                           ++.+++
T Consensus       240 ~~~~~~~~~il  250 (325)
T cd05594         240 GGGPDDAKEIM  250 (325)
T ss_pred             CCCCCCHHHHh
Confidence                 787776


No 46 
>KOG0578|consensus
Probab=100.00  E-value=4.2e-46  Score=403.86  Aligned_cols=246  Identities=33%  Similarity=0.574  Sum_probs=220.1

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ...|.....||+|+-|.||.|+...+++.||||.++......  .+-++.|+.+|+..+|+|||++++.|--.+.+|+||
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~--keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM  349 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK--KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM  349 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc--hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence            457999999999999999999999999999999998765433  345889999999999999999999998889999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDT  203 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~  203 (708)
                      ||++||+|.+.+. ...++|.++..++++++.||+|||.+||+|||||.+|||++.+|.+||+|||+|..+.... +-.+
T Consensus       350 Eym~ggsLTDvVt-~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~T  428 (550)
T KOG0578|consen  350 EYMEGGSLTDVVT-KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRST  428 (550)
T ss_pred             eecCCCchhhhhh-cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCcccc
Confidence            9999999988664 5579999999999999999999999999999999999999999999999999998876544 5678


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-HcCCC--CCCCCCCHHHHHHHHHhh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERV-LRGKY--RIPFYMSTDCENLLKKFL  280 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i-~~~~~--~~p~~~s~~~~~Li~~~L  280 (708)
                      .+|||.|||||++..+.| |+++||||||++++||+-|++||-.++.-.....| ..|..  ..|..+|++++|||.+||
T Consensus       429 mVGTPYWMAPEVvtrk~Y-G~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL  507 (550)
T KOG0578|consen  429 MVGTPYWMAPEVVTRKPY-GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCL  507 (550)
T ss_pred             ccCCCCccchhhhhhccc-CccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHh
Confidence            899999999999999998 69999999999999999999999876654444444 44544  457789999999999999


Q ss_pred             hhCCCCCCCHHHHh
Q psy2648         281 VLNPAKRASLEVSG  294 (708)
Q Consensus       281 ~~dP~~Rps~~~~~  294 (708)
                      +.||++|+++.+++
T Consensus       508 ~~dv~~RasA~eLL  521 (550)
T KOG0578|consen  508 VVDVEQRASAKELL  521 (550)
T ss_pred             hcchhcCCCHHHHh
Confidence            99999999999877


No 47 
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00  E-value=2.3e-45  Score=394.41  Aligned_cols=242  Identities=34%  Similarity=0.620  Sum_probs=218.2

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||.||+|++..+++.||||++.+... .....+.+..|+++++.+ +||||+++++++++++.+||||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            469999999999999999999999999976532 234455677899999865 799999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccccccCC
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~~~Gt~  208 (708)
                      |+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.... ........+||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTP  160 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCc
Confidence            9999999888899999999999999999999999999999999999999999999999999987543 223345678999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA  288 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp  288 (708)
                      .|+|||++.+..++ .++|||||||++|+|++|+.||.+.+..++.+.+..+...+|..++.++.+||++||+.||++|+
T Consensus       161 ~y~aPE~~~~~~~~-~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~  239 (321)
T cd05591         161 DYIAPEILQELEYG-PSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNKRL  239 (321)
T ss_pred             cccCHHHHcCCCCC-CccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcC
Confidence            99999999888774 78999999999999999999999999999999999999889999999999999999999999999


Q ss_pred             -------CHHHHh
Q psy2648         289 -------SLEVSG  294 (708)
Q Consensus       289 -------s~~~~~  294 (708)
                             +++++.
T Consensus       240 ~~~~~~~~~~~~~  252 (321)
T cd05591         240 GCVASQGGEDAIK  252 (321)
T ss_pred             CCCCCCCCHHHHh
Confidence                   666665


No 48 
>KOG0589|consensus
Probab=100.00  E-value=3.9e-46  Score=402.15  Aligned_cols=249  Identities=30%  Similarity=0.543  Sum_probs=234.3

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE-EEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT-LYLV  123 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~-~ylV  123 (708)
                      .++|.+++.+|+|+||.+++++|+..++.||+|.|.-........+....|+.+++++.|||||.+++.|+.++. ++||
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv   82 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV   82 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence            578999999999999999999999999999999999887776666788999999999999999999999998887 9999


Q ss_pred             EeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-C
Q psy2648         124 MEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-K  200 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~  200 (708)
                      |+||+||+|.+.|.+..  .++|+.+..||.||+.||+|||+++|+|||||+.||++..++.|||.|||+|+...+.. .
T Consensus        83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~  162 (426)
T KOG0589|consen   83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL  162 (426)
T ss_pred             EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence            99999999999997664  58999999999999999999999999999999999999999999999999999887665 6


Q ss_pred             ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHh
Q psy2648         201 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLLKKF  279 (708)
Q Consensus       201 ~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~~~  279 (708)
                      ..+..|||.||+||++.+.+| +.|+|||||||++|||++-+.+|.+.+...+..+|.++. .++|...|.+++.||+.|
T Consensus       163 a~tvvGTp~YmcPEil~d~pY-n~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~  241 (426)
T KOG0589|consen  163 ASTVVGTPYYMCPEILSDIPY-NEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSM  241 (426)
T ss_pred             hheecCCCcccCHHHhCCCCC-CccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHH
Confidence            778999999999999999999 489999999999999999999999999999999999998 468899999999999999


Q ss_pred             hhhCCCCCCCHHHHh
Q psy2648         280 LVLNPAKRASLEVSG  294 (708)
Q Consensus       280 L~~dP~~Rps~~~~~  294 (708)
                      |.++|..||++.+++
T Consensus       242 l~~~P~~RPsa~~LL  256 (426)
T KOG0589|consen  242 LRKNPEHRPSALELL  256 (426)
T ss_pred             hhcCCccCCCHHHHh
Confidence            999999999999876


No 49 
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=100.00  E-value=4.1e-45  Score=392.98  Aligned_cols=240  Identities=36%  Similarity=0.642  Sum_probs=214.8

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHH---HhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIM---KMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il---~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      |++++.||+|+||.||+|.+..+++.||||++++... .....+.+.+|++++   +.++||||+++++++++.+.+|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            7899999999999999999999999999999976532 233455677777766   466799999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCcc
Q psy2648         124 MEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLD  202 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~  202 (708)
                      |||+++++|..++. .+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++... ......
T Consensus        81 ~E~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~  159 (324)
T cd05589          81 MEYAAGGDLMMHIH-TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTS  159 (324)
T ss_pred             EcCCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCccc
Confidence            99999999998875 4679999999999999999999999999999999999999999999999999987543 233345


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhh
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL  282 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~  282 (708)
                      +.+|++.|+|||++.+..++ .++|||||||++|+|++|..||.+.+..++...+..+...+|..+++++.+||++||+.
T Consensus       160 ~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~  238 (324)
T cd05589         160 TFCGTPEFLAPEVLTETSYT-RAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLRR  238 (324)
T ss_pred             ccccCccccCHhHhcCCCCC-cccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhc
Confidence            67899999999999888774 78999999999999999999999999999999999998889999999999999999999


Q ss_pred             CCCCCCC
Q psy2648         283 NPAKRAS  289 (708)
Q Consensus       283 dP~~Rps  289 (708)
                      ||.+||+
T Consensus       239 dP~~R~~  245 (324)
T cd05589         239 NPERRLG  245 (324)
T ss_pred             CHhHcCC
Confidence            9999995


No 50 
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=100.00  E-value=2.7e-45  Score=402.76  Aligned_cols=247  Identities=30%  Similarity=0.536  Sum_probs=214.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ++|++++.||+|+||.||+|++..+++.||||++.+... .....+.+.+|+++|+.++|||||++++++++...+||||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            369999999999999999999999999999999876432 2344567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-----
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-----  199 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-----  199 (708)
                      ||+++|+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+....     
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  160 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY  160 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence            999999999999888899999999999999999999999999999999999999999999999999986432100     


Q ss_pred             -------------------------------------------CccccccCCcccccccccCCccCCCchhHHHHHHHHH
Q psy2648         200 -------------------------------------------KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILY  236 (708)
Q Consensus       200 -------------------------------------------~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvily  236 (708)
                                                                 .....+||+.|+|||++.+..++ .++|||||||+||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~  239 (377)
T cd05629         161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG-QECDWWSLGAIMF  239 (377)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC-CceeeEecchhhh
Confidence                                                       00135799999999999888774 7899999999999


Q ss_pred             HHHcCCCCCCCCCHHHHHHHHHcC--CCCCCC--CCCHHHHHHHHHhhhhCCCCC---CCHHHHh
Q psy2648         237 TLVSGSLPFDGSTLRELRERVLRG--KYRIPF--YMSTDCENLLKKFLVLNPAKR---ASLEVSG  294 (708)
Q Consensus       237 elltG~~Pf~~~~~~~l~~~i~~~--~~~~p~--~~s~~~~~Li~~~L~~dP~~R---ps~~~~~  294 (708)
                      +|++|..||.+.+..+....+...  ...+|.  .++.++++||++||. +|.+|   +++++++
T Consensus       240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l  303 (377)
T cd05629         240 ECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIK  303 (377)
T ss_pred             hhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHh
Confidence            999999999998888877777653  334454  478999999999998 77775   5888877


No 51 
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00  E-value=5.8e-45  Score=400.95  Aligned_cols=250  Identities=30%  Similarity=0.478  Sum_probs=215.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      .|++++.||+|+||+||+|++..+++.||||++.+... .....+.+.+|+++|+.++|||||++++++++.+.+|+|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            69999999999999999999999999999999976543 33455678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-------
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-------  198 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-------  198 (708)
                      ||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++..+...       
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~  161 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ  161 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence            9999999999998889999999999999999999999999999999999999999999999999997543100       


Q ss_pred             -----------------------------------------CCccccccCCcccccccccCCccCCCchhHHHHHHHHHH
Q psy2648         199 -----------------------------------------NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT  237 (708)
Q Consensus       199 -----------------------------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilye  237 (708)
                                                               ....+.+||+.|+|||++.+..++ .++|||||||++|+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~~DiwSlG~il~e  240 (381)
T cd05626         162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYT-QLCDWWSVGVILFE  240 (381)
T ss_pred             ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCC-CccceeehhhHHHH
Confidence                                                     011346899999999999888775 79999999999999


Q ss_pred             HHcCCCCCCCCCHHHHHHHHHcC--CCCCCC--CCCHHHHHHHHHhhhh--CCCCCCCHHHHh---hhh
Q psy2648         238 LVSGSLPFDGSTLRELRERVLRG--KYRIPF--YMSTDCENLLKKFLVL--NPAKRASLEVSG---EVT  297 (708)
Q Consensus       238 lltG~~Pf~~~~~~~l~~~i~~~--~~~~p~--~~s~~~~~Li~~~L~~--dP~~Rps~~~~~---~~~  297 (708)
                      |++|..||...+..+...++...  ...+|.  .+++++.+||.+||..  +|..|+++++++   |+.
T Consensus       241 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~  309 (381)
T cd05626         241 MLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFS  309 (381)
T ss_pred             HHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccC
Confidence            99999999988877766666543  334443  5789999999997654  455599999987   554


No 52 
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00  E-value=3.7e-45  Score=393.38  Aligned_cols=243  Identities=37%  Similarity=0.624  Sum_probs=217.5

Q ss_pred             EeEEcccCceEEEEEEEc---CCCcEEEEEEeccCCC--ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          51 LKTIGKGNFAKVKLAKHV---PTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        51 ~~~LG~G~fg~V~la~~~---~tg~~vAvK~i~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++.||+|+||.||+|++.   .+++.||||++.+...  .......+.+|+.+|+.++||||++++++++.++.+|+|||
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e   80 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE   80 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence            368999999999999874   5789999999976432  22334557789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC-CCCcccc
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~-~~~~~~~  204 (708)
                      |+++++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... .......
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (323)
T cd05584          81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTF  160 (323)
T ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccccc
Confidence            999999999999888999999999999999999999999999999999999999999999999999875432 3334557


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCC
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNP  284 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP  284 (708)
                      +||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.+..+....+..+...+|..+++++.+||++||+.||
T Consensus       161 ~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  239 (323)
T cd05584         161 CGTIEYMAPEILMRSGHG-KAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNP  239 (323)
T ss_pred             CCCccccChhhccCCCCC-CcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCH
Confidence            899999999999887764 7899999999999999999999999998999999999999999999999999999999999


Q ss_pred             CCCC-----CHHHHh
Q psy2648         285 AKRA-----SLEVSG  294 (708)
Q Consensus       285 ~~Rp-----s~~~~~  294 (708)
                      ++||     +++++.
T Consensus       240 ~~R~~~~~~~~~~l~  254 (323)
T cd05584         240 SSRLGAGPGDAAEVQ  254 (323)
T ss_pred             hHcCCCCCCCHHHHh
Confidence            9999     677665


No 53 
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00  E-value=4.4e-45  Score=393.94  Aligned_cols=242  Identities=35%  Similarity=0.614  Sum_probs=214.3

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||.||+|++..+++.||||++++.... ......+.+|+.+++.+ +||||+++++++++...+|||||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4799999999999999999999999999875432 33455678899999988 799999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcccc-CCCCCccccccCC
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~-~~~~~~~~~~Gt~  208 (708)
                      |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.. .......+.+||+
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTP  160 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCc
Confidence            999999988889999999999999999999999999999999999999999999999999998753 3334455679999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCC---------CHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS---------TLRELRERVLRGKYRIPFYMSTDCENLLKKF  279 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~---------~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~  279 (708)
                      .|+|||++.+..++ .++|||||||++|+|++|+.||...         ....+.+.+..+...+|..++.++.+||++|
T Consensus       161 ~y~aPE~~~~~~~~-~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~  239 (329)
T cd05588         161 NYIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGF  239 (329)
T ss_pred             cccCHHHHcCCCCC-CccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Confidence            99999999988775 7999999999999999999999631         2234667778888889999999999999999


Q ss_pred             hhhCCCCCCC------HHHHh
Q psy2648         280 LVLNPAKRAS------LEVSG  294 (708)
Q Consensus       280 L~~dP~~Rps------~~~~~  294 (708)
                      |+.||.+|++      +++++
T Consensus       240 L~~dP~~R~~~~~~~~~~~i~  260 (329)
T cd05588         240 LNKDPKERLGCHPQTGFRDIK  260 (329)
T ss_pred             hccCHHHcCCCCCCCCHHHHh
Confidence            9999999998      55665


No 54 
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00  E-value=4.8e-45  Score=391.42  Aligned_cols=242  Identities=34%  Similarity=0.603  Sum_probs=216.3

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHh-CCCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKM-LDHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||.||+|++..+++.||||++++... .....+.+..|.+++.. ++||||+++++++++.+.+|+||||+.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            479999999999999999999999999976532 12334566788888875 4899999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC-CCCccccccCC
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~-~~~~~~~~Gt~  208 (708)
                      |+|.+++..++.+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... .......+||+
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCc
Confidence            99999998888999999999999999999999999999999999999999999999999999875322 23345678999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA  288 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp  288 (708)
                      .|+|||++.+..++ .++|||||||++|+|++|..||.+.+..++.+.+..+...+|...+.++.+||++||+.||.+|+
T Consensus       161 ~y~aPE~~~~~~~~-~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~  239 (316)
T cd05620         161 DYIAPEILQGLKYT-FSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRL  239 (316)
T ss_pred             CccCHHHHcCCCCC-cccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHHHcC
Confidence            99999999988775 78999999999999999999999999999999998888888889999999999999999999999


Q ss_pred             CH-HHHh
Q psy2648         289 SL-EVSG  294 (708)
Q Consensus       289 s~-~~~~  294 (708)
                      ++ +++.
T Consensus       240 ~~~~~~~  246 (316)
T cd05620         240 GVVGNIR  246 (316)
T ss_pred             CChHHHH
Confidence            97 4554


No 55 
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=100.00  E-value=2.5e-45  Score=397.85  Aligned_cols=247  Identities=34%  Similarity=0.625  Sum_probs=221.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ++|++++.||+|+||.||+|++..+++.||||++.+.... ......+.+|+++|+.++||||+++++++++++.+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            4799999999999999999999999999999999865432 244566889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-----
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-----  199 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-----  199 (708)
                      ||+++++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......     
T Consensus        81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (350)
T cd05573          81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY  160 (350)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence            999999999999888899999999999999999999999999999999999999999999999999987654332     


Q ss_pred             -------------------------CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy2648         200 -------------------------KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELR  254 (708)
Q Consensus       200 -------------------------~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~  254 (708)
                                               ......||+.|+|||++.+..++ .++|||||||+||+|++|+.||.+.+..+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~  239 (350)
T cd05573         161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYG-LECDWWSLGVILYEMLYGFPPFYSDTLQETY  239 (350)
T ss_pred             ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCC-CceeeEecchhhhhhccCCCCCCCCCHHHHH
Confidence                                     23456799999999999988774 8999999999999999999999999888888


Q ss_pred             HHHHc--CCCCCCCC--CCHHHHHHHHHhhhhCCCCCCC-HHHHh
Q psy2648         255 ERVLR--GKYRIPFY--MSTDCENLLKKFLVLNPAKRAS-LEVSG  294 (708)
Q Consensus       255 ~~i~~--~~~~~p~~--~s~~~~~Li~~~L~~dP~~Rps-~~~~~  294 (708)
                      .++..  ....+|..  +++++.+||.+||. ||.+|++ +++++
T Consensus       240 ~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll  283 (350)
T cd05573         240 NKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIK  283 (350)
T ss_pred             HHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHh
Confidence            88877  44555554  49999999999997 9999999 99887


No 56 
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00  E-value=1.6e-45  Score=394.95  Aligned_cols=240  Identities=34%  Similarity=0.604  Sum_probs=216.8

Q ss_pred             EeEEcccCceEEEEEEE---cCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Q psy2648          51 LKTIGKGNFAKVKLAKH---VPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYA  127 (708)
Q Consensus        51 ~~~LG~G~fg~V~la~~---~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~  127 (708)
                      ++.||+|+||.||++++   ..+|+.||||++.+..........+.+|+++|++++||||+++++++++++.+|+||||+
T Consensus         1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   80 (318)
T cd05582           1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL   80 (318)
T ss_pred             CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence            36799999999999986   368899999999865443344556778999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCcccccc
Q psy2648         128 SGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTFCG  206 (708)
Q Consensus       128 ~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~~~~G  206 (708)
                      ++|+|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... ......+|
T Consensus        81 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  160 (318)
T cd05582          81 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG  160 (318)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccC
Confidence            99999999988888999999999999999999999999999999999999999999999999998765433 33456789


Q ss_pred             CCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCC
Q psy2648         207 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK  286 (708)
Q Consensus       207 t~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~  286 (708)
                      ++.|+|||++.+..++ .++|||||||++|+|++|+.||.+.+..+....+......+|..+++++.+||++||+.||.+
T Consensus       161 ~~~y~aPE~~~~~~~~-~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~~  239 (318)
T cd05582         161 TVEYMAPEVVNRRGHT-QSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPAN  239 (318)
T ss_pred             ChhhcCHHHHcCCCCC-CccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHhH
Confidence            9999999999887764 789999999999999999999999999999999999988999999999999999999999999


Q ss_pred             CCCHH
Q psy2648         287 RASLE  291 (708)
Q Consensus       287 Rps~~  291 (708)
                      ||++.
T Consensus       240 R~~a~  244 (318)
T cd05582         240 RLGAG  244 (318)
T ss_pred             cCCCC
Confidence            99943


No 57 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=100.00  E-value=9.3e-45  Score=381.92  Aligned_cols=248  Identities=29%  Similarity=0.504  Sum_probs=210.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++|++.+.||+|+||.||+|++..+++.||||++..........+.+.+|+.+++.++||||++++++++..+.+|+|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            47999999999999999999999999999999998665444455678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC--Cccc
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--KLDT  203 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~--~~~~  203 (708)
                      |++++.+..+......+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++.......  ....
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTE  160 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccc
Confidence            99988776655545679999999999999999999999999999999999999999999999999998654322  2334


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-------------------CCC
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK-------------------YRI  264 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~-------------------~~~  264 (708)
                      .+|++.|+|||++.+..++ .++|||||||++|+|++|+.||.+.+..+....+....                   ...
T Consensus       161 ~~~~~~y~aPE~~~~~~~~-~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd07848         161 YVATRWYRSPELLLGAPYG-KAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRF  239 (287)
T ss_pred             cccccccCCcHHHcCCCCC-CchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccccc
Confidence            6799999999999888774 79999999999999999999998876544332222110                   011


Q ss_pred             C-------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         265 P-------------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       265 p-------------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      |             ..+|.++.+||++||++||++|||+++++
T Consensus       240 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l  282 (287)
T cd07848         240 PAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCL  282 (287)
T ss_pred             CcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence            1             12678899999999999999999999876


No 58 
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00  E-value=6.8e-45  Score=390.26  Aligned_cols=242  Identities=37%  Similarity=0.662  Sum_probs=215.5

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHh-CCCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKM-LDHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||+||+|++..+++.||||++++... .....+.+..|..++.. ++||||++++++++....+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            469999999999999999999999999986532 22344556677777765 4899999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC-CCCccccccCC
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~-~~~~~~~~Gt~  208 (708)
                      |+|.+++...+.+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.... .......+||+
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~  160 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCc
Confidence            99999998888999999999999999999999999999999999999999999999999999975432 23345678999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA  288 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp  288 (708)
                      .|+|||++.+..++ .++|||||||++|+|++|..||.+.+..++...+......+|...+.++.+||.+||..||.+||
T Consensus       161 ~y~aPE~~~~~~~~-~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~  239 (316)
T cd05592         161 DYIAPEILKGQKYN-ESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTKRL  239 (316)
T ss_pred             cccCHHHHcCCCCC-CcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcC
Confidence            99999999988775 78999999999999999999999999999999998888888889999999999999999999999


Q ss_pred             CHH-HHh
Q psy2648         289 SLE-VSG  294 (708)
Q Consensus       289 s~~-~~~  294 (708)
                      ++. ++.
T Consensus       240 ~~~~~l~  246 (316)
T cd05592         240 GVDGDIR  246 (316)
T ss_pred             CChHHHH
Confidence            875 443


No 59 
>KOG0582|consensus
Probab=100.00  E-value=1.9e-44  Score=379.89  Aligned_cols=260  Identities=32%  Similarity=0.515  Sum_probs=225.9

Q ss_pred             ccCCCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEe
Q psy2648          37 RRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIET  116 (708)
Q Consensus        37 ~~~~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~  116 (708)
                      ....-.+..+.|++...||.|.-+.||+|+++.+++.||||+++-++.+.. +..+.+|+..|+.++|||||+++..|..
T Consensus        17 ~~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv   95 (516)
T KOG0582|consen   17 SEKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVV   95 (516)
T ss_pred             ccccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEe
Confidence            344556677899999999999999999999999999999999998776544 7889999999999999999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccc
Q psy2648         117 EKTLYLVMEYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE  194 (708)
Q Consensus       117 ~~~~ylVmEy~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~  194 (708)
                      +..+|+||.|+.+|++++.|...  ..+.|..+..++++++.||.|||++|.||||||+.|||||.+|.|||+|||.+..
T Consensus        96 ~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~  175 (516)
T KOG0582|consen   96 DSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSAS  175 (516)
T ss_pred             cceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeee
Confidence            99999999999999999988764  4699999999999999999999999999999999999999999999999998765


Q ss_pred             cC-CCCC----ccccccCCccccccccc--CCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCC-
Q psy2648         195 FT-PGNK----LDTFCGSPPYAAPELFQ--GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF-  266 (708)
Q Consensus       195 ~~-~~~~----~~~~~Gt~~Y~APE~l~--~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~-  266 (708)
                      +. .+..    .+++.|||+|||||++.  ...|+ .|+||||||++..||++|..||....+.++.-.-+.+.++.|. 
T Consensus       176 l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYd-fKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t  254 (516)
T KOG0582|consen  176 LFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYD-FKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLT  254 (516)
T ss_pred             ecccCceeeEeeccccCcccccChHHhhhcccCcc-chhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCccc
Confidence            43 2321    26789999999999964  34565 7999999999999999999999998887766666666554321 


Q ss_pred             ---------CCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         267 ---------YMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       267 ---------~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                               ..+..++.+|..||++||.+|||+++++   |+..
T Consensus       255 ~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~  298 (516)
T KOG0582|consen  255 SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKK  298 (516)
T ss_pred             ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhh
Confidence                     2456789999999999999999999887   6654


No 60 
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00  E-value=8.4e-45  Score=391.53  Aligned_cols=248  Identities=35%  Similarity=0.620  Sum_probs=216.6

Q ss_pred             CeEEEeEEcccCceEEEEEEEc---CCCcEEEEEEeccCCC--ChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHV---PTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~---~tg~~vAvK~i~~~~~--~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~  120 (708)
                      +|++++.||+|+||.||+|++.   .+++.||||++.+...  .....+.+.+|+++|+.+ +||||++++++++.++.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            5899999999999999999874   5889999999976432  123345677899999999 599999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-
Q psy2648         121 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-  199 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-  199 (708)
                      |+||||+++|+|.+++..+..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.... 
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~  160 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK  160 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence            9999999999999999888899999999999999999999999999999999999999999999999999997654322 


Q ss_pred             -CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCC----CCHHHHHHHHHcCCCCCCCCCCHHHHH
Q psy2648         200 -KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG----STLRELRERVLRGKYRIPFYMSTDCEN  274 (708)
Q Consensus       200 -~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~----~~~~~l~~~i~~~~~~~p~~~s~~~~~  274 (708)
                       .....+||+.|+|||++.+....+.++|||||||+||+|++|..||..    ....++...+......+|..+++++.+
T Consensus       161 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (332)
T cd05614         161 ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQD  240 (332)
T ss_pred             CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence             234578999999999998765446789999999999999999999964    345567777777777888889999999


Q ss_pred             HHHHhhhhCCCCCC-----CHHHHh
Q psy2648         275 LLKKFLVLNPAKRA-----SLEVSG  294 (708)
Q Consensus       275 Li~~~L~~dP~~Rp-----s~~~~~  294 (708)
                      ||.+||..||++||     +++++.
T Consensus       241 li~~~l~~dp~~R~~~~~~~~~~~l  265 (332)
T cd05614         241 LLHKLLRKDPKKRLGAGPQGASEIK  265 (332)
T ss_pred             HHHHHcCCCHHHcCCCCCCCHHHHH
Confidence            99999999999999     666666


No 61 
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00  E-value=1.9e-44  Score=381.09  Aligned_cols=249  Identities=32%  Similarity=0.512  Sum_probs=209.7

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      .+++|++.+.||+|+||.||+|++..+++.||||+++.... ......+.+|+++++.++||||+++++++.++..+|+|
T Consensus         3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv   81 (288)
T cd07871           3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV   81 (288)
T ss_pred             ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence            35689999999999999999999999999999999975432 22234577899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCc
Q psy2648         124 MEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKL  201 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~  201 (708)
                      |||+.+ +|.+++...+ .+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..... ...
T Consensus        82 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~  160 (288)
T cd07871          82 FEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY  160 (288)
T ss_pred             EeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccc
Confidence            999985 9999887654 4799999999999999999999999999999999999999999999999998754322 223


Q ss_pred             cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-------------------C
Q psy2648         202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK-------------------Y  262 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~-------------------~  262 (708)
                      ....|++.|+|||++.+....+.++|||||||++|+|++|+.||.+.+..+....+....                   +
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd07871         161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSY  240 (288)
T ss_pred             cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcc
Confidence            456789999999998764433578999999999999999999999887766554443210                   0


Q ss_pred             CCC-----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         263 RIP-----------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       263 ~~p-----------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .+|           ..+++++.+||++||+.||.+|||+++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l  283 (288)
T cd07871         241 LFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAAL  283 (288)
T ss_pred             ccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence            111           23578999999999999999999999876


No 62 
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00  E-value=8.2e-45  Score=399.64  Aligned_cols=246  Identities=30%  Similarity=0.521  Sum_probs=214.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      +|++++.||+|+||.||+|++..+++.||||++.+... .....+.+.+|+++|+.++|||||++++++++++.+|||||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            69999999999999999999999999999999976432 23345678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-------
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-------  198 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-------  198 (708)
                      ||++|+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+...       
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~  161 (382)
T cd05625          82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ  161 (382)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccc
Confidence            9999999999988888999999999999999999999999999999999999999999999999997532100       


Q ss_pred             -----------------------------------------CCccccccCCcccccccccCCccCCCchhHHHHHHHHHH
Q psy2648         199 -----------------------------------------NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT  237 (708)
Q Consensus       199 -----------------------------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilye  237 (708)
                                                               ....+.+||+.|+|||++.+..|+ .++|||||||+||+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~~DiwSlGvil~e  240 (382)
T cd05625         162 SGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILYE  240 (382)
T ss_pred             cccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCC-CeeeEEechHHHHH
Confidence                                                     011245799999999999988875 79999999999999


Q ss_pred             HHcCCCCCCCCCHHHHHHHHHcCC--CCCC--CCCCHHHHHHHHHhhhhCCCCCCC---HHHHh
Q psy2648         238 LVSGSLPFDGSTLRELRERVLRGK--YRIP--FYMSTDCENLLKKFLVLNPAKRAS---LEVSG  294 (708)
Q Consensus       238 lltG~~Pf~~~~~~~l~~~i~~~~--~~~p--~~~s~~~~~Li~~~L~~dP~~Rps---~~~~~  294 (708)
                      |++|+.||.+.+..+...++....  ..+|  ...++++.+||.+|+ .||.+|++   +++++
T Consensus       241 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~  303 (382)
T cd05625         241 MLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIK  303 (382)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHh
Confidence            999999999988877777776533  3334  357899999999986 59999997   77766


No 63 
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00  E-value=6.7e-45  Score=391.20  Aligned_cols=239  Identities=36%  Similarity=0.604  Sum_probs=213.6

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHH-HHHhCCCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVR-IMKMLDHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||+||+|++..+|+.||||++.+.... ....+.++.|.. +++.++||||++++++++..+.+|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            4799999999999999999999999999765332 223345566655 46789999999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC-CCCccccccCC
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~-~~~~~~~~Gt~  208 (708)
                      |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... .......+||+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTP  160 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCCh
Confidence            99999999888999999999999999999999999999999999999999999999999999875432 23345678999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA  288 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp  288 (708)
                      .|+|||++.+..++ .++|||||||++|+|++|..||.+.+..++.+.+..+...++...++++.+||++||+.||.+||
T Consensus       161 ~y~aPE~~~~~~~~-~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~  239 (323)
T cd05575         161 EYLAPEVLRKQPYD-RTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRL  239 (323)
T ss_pred             hhcChhhhcCCCCC-ccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCC
Confidence            99999999988775 78999999999999999999999999999999999988888888899999999999999999999


Q ss_pred             CHH
Q psy2648         289 SLE  291 (708)
Q Consensus       289 s~~  291 (708)
                      ++.
T Consensus       240 ~~~  242 (323)
T cd05575         240 GAK  242 (323)
T ss_pred             CCC
Confidence            974


No 64 
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00  E-value=5.2e-45  Score=400.23  Aligned_cols=247  Identities=30%  Similarity=0.508  Sum_probs=214.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      .+|++++.||+|+||.||+|++..+++.||||++.+... .....+.+.+|+++|+.++||||+++++.+++++.+||||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            369999999999999999999999999999999975432 2233456789999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC------
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG------  198 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~------  198 (708)
                      |||++|+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+...      
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~  160 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  160 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence            99999999999998889999999999999999999999999999999999999999999999999997532100      


Q ss_pred             --------------------------------------CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc
Q psy2648         199 --------------------------------------NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS  240 (708)
Q Consensus       199 --------------------------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt  240 (708)
                                                            ......+||+.|+|||++.+..++ .++|||||||+||+|++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvilyell~  239 (376)
T cd05598         161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILYEMLV  239 (376)
T ss_pred             ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCC-cceeeeeccceeeehhh
Confidence                                                  001245899999999999888775 79999999999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHcCCC--CCCC--CCCHHHHHHHHHhhhhCCCCCC---CHHHHh
Q psy2648         241 GSLPFDGSTLRELRERVLRGKY--RIPF--YMSTDCENLLKKFLVLNPAKRA---SLEVSG  294 (708)
Q Consensus       241 G~~Pf~~~~~~~l~~~i~~~~~--~~p~--~~s~~~~~Li~~~L~~dP~~Rp---s~~~~~  294 (708)
                      |+.||.+.+..+....+.....  .+|.  .+++++.+||.+|+ .||.+|+   ++++++
T Consensus       240 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell  299 (376)
T cd05598         240 GQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIK  299 (376)
T ss_pred             CCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHh
Confidence            9999999888877777765432  3333  57899999999976 5999999   888877


No 65 
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00  E-value=8.8e-45  Score=389.57  Aligned_cols=242  Identities=38%  Similarity=0.670  Sum_probs=218.7

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||+||+|++..+++.||||++.+... .......+.+|+++++.+ +||||+++++++++.+.+|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            479999999999999999999999999986532 233455677899999887 699999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccccccCC
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~~~Gt~  208 (708)
                      |+|.+++...+.+++.++..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++... ........+|++
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~  160 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTP  160 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCc
Confidence            9999999888899999999999999999999999999999999999999999999999999986532 233345578999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA  288 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp  288 (708)
                      .|+|||++.+..++ .++|||||||++|+|++|..||.+.+..++...+......+|..++.++.+||++||..||.+||
T Consensus       161 ~y~aPE~~~~~~~~-~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~  239 (318)
T cd05570         161 DYIAPEILSYQPYG-PAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEKRL  239 (318)
T ss_pred             cccCHHHhcCCCCC-cchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHHHcC
Confidence            99999999988875 79999999999999999999999999999999999888888989999999999999999999999


Q ss_pred             CH-----HHHh
Q psy2648         289 SL-----EVSG  294 (708)
Q Consensus       289 s~-----~~~~  294 (708)
                      ++     .++.
T Consensus       240 s~~~~~~~~ll  250 (318)
T cd05570         240 GCLPTGEQDIK  250 (318)
T ss_pred             CCCCCCHHHHh
Confidence            98     7665


No 66 
>KOG0197|consensus
Probab=100.00  E-value=2.7e-45  Score=396.85  Aligned_cols=246  Identities=32%  Similarity=0.559  Sum_probs=216.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      .+++++.||+|.||+||+|.+..+ ..||||.+....+.+   +.|.+|++||++|+|+|||+|++++..++.+||||||
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~---~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~  282 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSP---EAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEY  282 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccCh---hHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEe
Confidence            456789999999999999999643 369999998765543   4577999999999999999999999998899999999


Q ss_pred             cCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcccc
Q psy2648         127 ASGGEVFDYLVL--HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF  204 (708)
Q Consensus       127 ~~gg~L~~~i~~--~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~  204 (708)
                      ++.|+|.+||+.  .+.+...+...++.|||+||+||+++++|||||...|||++++..+||+||||++...++......
T Consensus       283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~  362 (468)
T KOG0197|consen  283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASE  362 (468)
T ss_pred             cccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecC
Confidence            999999999987  356889999999999999999999999999999999999999999999999999954443322222


Q ss_pred             cc--CCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHhh
Q psy2648         205 CG--SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYMSTDCENLLKKFL  280 (708)
Q Consensus       205 ~G--t~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~p~~~s~~~~~Li~~~L  280 (708)
                      -+  ...|.|||.+....++ .++|||||||+||||+| |+.||.+.+..++.+.|.+| ..+.|..+++++-++|..||
T Consensus       363 ~~kfPIkWtAPEa~~~~~FS-~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW  441 (468)
T KOG0197|consen  363 GGKFPIKWTAPEALNYGKFS-SKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCW  441 (468)
T ss_pred             CCCCCceecCHHHHhhCCcc-cccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHh
Confidence            22  2359999999988886 79999999999999999 99999999999999999998 34567789999999999999


Q ss_pred             hhCCCCCCCHHHHhhhh
Q psy2648         281 VLNPAKRASLEVSGEVT  297 (708)
Q Consensus       281 ~~dP~~Rps~~~~~~~~  297 (708)
                      ..+|++|||++.+.+..
T Consensus       442 ~~~P~~RPtF~~L~~~l  458 (468)
T KOG0197|consen  442 HEDPEDRPTFETLREVL  458 (468)
T ss_pred             hCCcccCCCHHHHHHHH
Confidence            99999999999777654


No 67 
>KOG0986|consensus
Probab=100.00  E-value=5.2e-46  Score=391.19  Aligned_cols=287  Identities=27%  Similarity=0.432  Sum_probs=248.2

Q ss_pred             cCCCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhh-HHHHHHHHHHHHhCCCCCeeeEEEEEEe
Q psy2648          38 RERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGS-LQKLFREVRIMKMLDHPNIVKLFQVIET  116 (708)
Q Consensus        38 ~~~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~-~~~~~~Ei~il~~l~HpnIv~l~~~~~~  116 (708)
                      .+..+.....|...++||+|+||.|+-|+.+.||+.||+|.+.|+.+.... ....+.|-.||++++.|+||.|-..|++
T Consensus       177 lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeT  256 (591)
T KOG0986|consen  177 LELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFET  256 (591)
T ss_pred             HHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecC
Confidence            344566667899999999999999999999999999999999887654322 2346789999999999999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccc
Q psy2648         117 EKTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE  194 (708)
Q Consensus       117 ~~~~ylVmEy~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~  194 (708)
                      .+.+++||..|+||||.-+|...+  .++|..++.|+.||+.||++||+.+||+|||||+|||||++|+|+|+|+|||..
T Consensus       257 kd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAve  336 (591)
T KOG0986|consen  257 KDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVE  336 (591)
T ss_pred             CCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEe
Confidence            999999999999999999998877  799999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCC----CHHHHHHHHHcCCCCCCCCCCH
Q psy2648         195 FTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS----TLRELRERVLRGKYRIPFYMST  270 (708)
Q Consensus       195 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~----~~~~l~~~i~~~~~~~p~~~s~  270 (708)
                      +..+.......||..|||||++++..|+ ..+|||||||+||+|+.|+.||...    ..+++-++++.....+|...|+
T Consensus       337 i~~g~~~~~rvGT~GYMAPEvl~ne~Y~-~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~  415 (591)
T KOG0986|consen  337 IPEGKPIRGRVGTVGYMAPEVLQNEVYD-FSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSE  415 (591)
T ss_pred             cCCCCccccccCcccccCHHHHcCCccc-CCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCH
Confidence            9888888888999999999999999986 7899999999999999999999753    3457888899888889999999


Q ss_pred             HHHHHHHHhhhhCCCCCCCHH-----HHh---------hhhhCCCCcccCCCCCCCccCCCCCCCCCCccccccccchhh
Q psy2648         271 DCENLLKKFLVLNPAKRASLE-----VSG---------EVTLGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSAS  336 (708)
Q Consensus       271 ~~~~Li~~~L~~dP~~Rps~~-----~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  336 (708)
                      ++++|.+.+|++||.+|....     ++.         |-.+.            .....|++-|+|....--+.+|..+
T Consensus       416 eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rle------------agml~PPfiPdp~aVyakDv~DIeq  483 (591)
T KOG0986|consen  416 EAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLE------------AGMLEPPFIPDPGAVYAKDVLDIEQ  483 (591)
T ss_pred             HHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHh------------ccCCCCCCCCCccccchhhhhhhhh
Confidence            999999999999999998764     222         32222            2345566777777665555555554


Q ss_pred             h
Q psy2648         337 I  337 (708)
Q Consensus       337 ~  337 (708)
                      +
T Consensus       484 F  484 (591)
T KOG0986|consen  484 F  484 (591)
T ss_pred             c
Confidence            4


No 68 
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00  E-value=1.9e-44  Score=388.01  Aligned_cols=244  Identities=35%  Similarity=0.604  Sum_probs=219.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      +|++.+.||+|+||.||+|++..+++.||||++.+... .....+.+..|+++++.+. ||+|+++++++++.+.+|+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            48899999999999999999999999999999986532 2334456778999998886 577889999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC-CCCccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDT  203 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~-~~~~~~  203 (708)
                      ||+++|+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... ......
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~  160 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRT  160 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccC
Confidence            9999999999998888999999999999999999999999999999999999999999999999999875432 233456


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhC
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN  283 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~d  283 (708)
                      .+||+.|+|||++.+..++ .++|||||||++|+|++|..||.+.+..++.+.+......+|...+.++.+|+.+||..|
T Consensus       161 ~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~  239 (323)
T cd05615         161 FCGTPDYIAPEIIAYQPYG-KSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKH  239 (323)
T ss_pred             ccCCccccCHHHHcCCCCC-CccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccC
Confidence            7899999999999888774 799999999999999999999999999999999999988899999999999999999999


Q ss_pred             CCCCCCHH
Q psy2648         284 PAKRASLE  291 (708)
Q Consensus       284 P~~Rps~~  291 (708)
                      |.+|++..
T Consensus       240 p~~R~~~~  247 (323)
T cd05615         240 PSKRLGCG  247 (323)
T ss_pred             HhhCCCCC
Confidence            99999853


No 69 
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=100.00  E-value=1.6e-44  Score=387.54  Aligned_cols=242  Identities=34%  Similarity=0.596  Sum_probs=215.9

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHh-CCCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKM-LDHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||+||+|++..+++.||||++.+... .....+.+..|..+++. ++||||+++++++++.+.+||||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            479999999999999999999999999986532 12334556778888876 5899999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC-CCCccccccCC
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~-~~~~~~~~Gt~  208 (708)
                      |+|.+++.....+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... .......+||+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCc
Confidence            99999998888899999999999999999999999999999999999999999999999999875422 23345678999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA  288 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp  288 (708)
                      .|+|||++.+..++ .++|||||||++|+|++|..||.+.+..++.+.+......+|...+.++.+||.+||+.||.+||
T Consensus       161 ~y~aPE~~~~~~~~-~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~  239 (316)
T cd05619         161 DYIAPEILLGQKYN-TSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRL  239 (316)
T ss_pred             cccCHHHHcCCCCC-chhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCHhhcC
Confidence            99999999888775 79999999999999999999999999999998888887788888999999999999999999999


Q ss_pred             CHH-HHh
Q psy2648         289 SLE-VSG  294 (708)
Q Consensus       289 s~~-~~~  294 (708)
                      ++. ++.
T Consensus       240 ~~~~~l~  246 (316)
T cd05619         240 GVKGDIR  246 (316)
T ss_pred             CChHHHH
Confidence            996 554


No 70 
>KOG0659|consensus
Probab=100.00  E-value=8.2e-45  Score=360.95  Aligned_cols=248  Identities=31%  Similarity=0.506  Sum_probs=214.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      .+|..++.||+|.||.||+|++..||+.||||.|+..+.........+|||+.|+.++|||||.|.++|-..+.+.||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            47999999999999999999999999999999998776555555678999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC-ccc
Q psy2648         126 YASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDT  203 (708)
Q Consensus       126 y~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~-~~~  203 (708)
                      |++. ||...|+.+ -.++..+++.|+.|++.||+|||++.|+||||||.|+||+.+|.+||+|||+++.+..... ...
T Consensus        82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~  160 (318)
T KOG0659|consen   82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTH  160 (318)
T ss_pred             eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCccccc
Confidence            9975 898888755 3589999999999999999999999999999999999999999999999999998865433 333


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC--C--------------------
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG--K--------------------  261 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~--~--------------------  261 (708)
                      .+-|..|.|||++.|....+..+||||.|||+.||+.|.+-|.|.+.-+-...|.+.  .                    
T Consensus       161 ~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~  240 (318)
T KOG0659|consen  161 QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQ  240 (318)
T ss_pred             ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhc
Confidence            478899999999998776688999999999999999999989887765544555331  1                    


Q ss_pred             CCCC------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         262 YRIP------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       262 ~~~p------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ++.|      ...+.++.||+.+||.+||.+|+++.+++
T Consensus       241 ~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL  279 (318)
T KOG0659|consen  241 FPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQAL  279 (318)
T ss_pred             CCCCccccccccccHHHHHHHHhhhccCchhcccHHHHh
Confidence            1111      12567889999999999999999999887


No 71 
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00  E-value=1.3e-44  Score=394.92  Aligned_cols=247  Identities=31%  Similarity=0.548  Sum_probs=215.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      +.|++++.||+|+||.||+|++..+++.||||++.+... .......+.+|+.++..++||||+++++.+++.+.+||||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            469999999999999999999999999999999975432 2334566788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-----
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-----  199 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-----  199 (708)
                      |||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......     
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~  160 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY  160 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence            999999999999988899999999999999999999999999999999999999999999999999986442110     


Q ss_pred             -------------------------------CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCC
Q psy2648         200 -------------------------------KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS  248 (708)
Q Consensus       200 -------------------------------~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~  248 (708)
                                                     ...+.+||+.|+|||++.+..++ .++|||||||++|+|++|..||.+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~-~~~DiwSlGvilyel~tG~~Pf~~~  239 (360)
T cd05627         161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYN-KLCDWWSLGVIMYEMLIGYPPFCSE  239 (360)
T ss_pred             cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCC-CcceeccccceeeecccCCCCCCCC
Confidence                                           01246899999999999988875 7999999999999999999999999


Q ss_pred             CHHHHHHHHHcCC--CCCCC--CCCHHHHHHHHHhhhhCCCCCCC---HHHHh
Q psy2648         249 TLRELRERVLRGK--YRIPF--YMSTDCENLLKKFLVLNPAKRAS---LEVSG  294 (708)
Q Consensus       249 ~~~~l~~~i~~~~--~~~p~--~~s~~~~~Li~~~L~~dP~~Rps---~~~~~  294 (708)
                      +..+...++....  +.+|.  ..++++++||.+|+ .||.+|++   +++++
T Consensus       240 ~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~  291 (360)
T cd05627         240 TPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIK  291 (360)
T ss_pred             CHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHh
Confidence            9888888887643  33443  36899999999987 49999985   56665


No 72 
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00  E-value=2.3e-44  Score=388.37  Aligned_cols=238  Identities=35%  Similarity=0.635  Sum_probs=210.9

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||+||+|++..+++.||+|++.+... .......+.+|+.++..+ +||||+++++++++.+.+||||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            479999999999999999999999999987643 234455678899998776 799999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccccccCC
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~~~Gt~  208 (708)
                      |+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++... ........+||+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP  160 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCc
Confidence            9999999888899999999999999999999999999999999999999999999999999987532 333445678999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCC---------CCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---------STLRELRERVLRGKYRIPFYMSTDCENLLKKF  279 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~---------~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~  279 (708)
                      .|+|||++.+..++ .++|||||||++|+|++|..||..         .....+.+.+......+|...+.++.+||++|
T Consensus       161 ~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~  239 (329)
T cd05618         161 NYIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSF  239 (329)
T ss_pred             cccCHHHHcCCCCC-CccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Confidence            99999999988774 789999999999999999999952         12344667777888889999999999999999


Q ss_pred             hhhCCCCCCCH
Q psy2648         280 LVLNPAKRASL  290 (708)
Q Consensus       280 L~~dP~~Rps~  290 (708)
                      |..||.+|++.
T Consensus       240 L~~dP~~R~~~  250 (329)
T cd05618         240 LNKDPKERLGC  250 (329)
T ss_pred             hcCCHHHcCCC
Confidence            99999999984


No 73 
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00  E-value=2.5e-44  Score=394.60  Aligned_cols=255  Identities=29%  Similarity=0.515  Sum_probs=221.1

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  120 (708)
                      ....++|++.+.||+|+||.||+|++..+++.||||++.+.... ....+.+.+|+.+|+.++||||++++++++++..+
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~  118 (370)
T cd05596          39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL  118 (370)
T ss_pred             CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            34567899999999999999999999999999999999764322 23344577899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-
Q psy2648         121 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-  199 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-  199 (708)
                      |+||||++||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus       119 ~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~  197 (370)
T cd05596         119 YMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM  197 (370)
T ss_pred             EEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc
Confidence            999999999999998754 578999999999999999999999999999999999999999999999999987654322 


Q ss_pred             -CccccccCCcccccccccCCc---cCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCCHH
Q psy2648         200 -KLDTFCGSPPYAAPELFQGKK---YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK--YRIPF--YMSTD  271 (708)
Q Consensus       200 -~~~~~~Gt~~Y~APE~l~~~~---~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~--~~~p~--~~s~~  271 (708)
                       .....+||+.|+|||++.+..   +.+.++|||||||+||+|++|..||.+.+....+..+....  ..+|.  .+|.+
T Consensus       198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  277 (370)
T cd05596         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQ  277 (370)
T ss_pred             ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHH
Confidence             234578999999999987543   23578999999999999999999999999888888887754  34454  47899


Q ss_pred             HHHHHHHhhhhCCCC--CCCHHHHh---hhh
Q psy2648         272 CENLLKKFLVLNPAK--RASLEVSG---EVT  297 (708)
Q Consensus       272 ~~~Li~~~L~~dP~~--Rps~~~~~---~~~  297 (708)
                      +.+||++||+.+|.+  |+++++++   |+.
T Consensus       278 ~~~li~~~L~~~p~r~~R~s~~ell~h~~~~  308 (370)
T cd05596         278 AKDLICAFLTDREVRLGRNGVDEIKSHPFFK  308 (370)
T ss_pred             HHHHHHHHccChhhccCCCCHHHHhcCcccC
Confidence            999999999999998  99999987   654


No 74 
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00  E-value=2.2e-44  Score=386.74  Aligned_cols=239  Identities=35%  Similarity=0.594  Sum_probs=213.1

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHH-HHHhCCCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVR-IMKMLDHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||.||+|++..+++.||||++.+... .......+.+|.. +++.++||||+++++++++.+.+|+||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            479999999999999999999999999976533 2223345566654 67889999999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccccccCC
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~~~Gt~  208 (708)
                      |+|..++.....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++... ........+||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTP  160 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCc
Confidence            9999999888889999999999999999999999999999999999999999999999999987532 223345678999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA  288 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp  288 (708)
                      .|+|||++.+..++ .++|||||||++|+|++|..||.+.+..++.+.+..+...+|...+.++.++|.+||+.||.+|+
T Consensus       161 ~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~  239 (321)
T cd05603         161 EYLAPEVLRKEPYD-RTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRL  239 (321)
T ss_pred             ccCCHHHhcCCCCC-CcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcC
Confidence            99999999888775 78999999999999999999999999999999999988888888999999999999999999999


Q ss_pred             CHH
Q psy2648         289 SLE  291 (708)
Q Consensus       289 s~~  291 (708)
                      +..
T Consensus       240 ~~~  242 (321)
T cd05603         240 GAK  242 (321)
T ss_pred             CCC
Confidence            863


No 75 
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=100.00  E-value=2.1e-44  Score=387.73  Aligned_cols=240  Identities=35%  Similarity=0.577  Sum_probs=212.6

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHH-HHHhCCCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVR-IMKMLDHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||.||+|++..+++.||+|++.+.... ......+..|.. +++.++||||++++++++..+.+|+||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            4799999999999999999999999999764321 222334555544 56789999999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccccccCC
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~~~Gt~  208 (708)
                      |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++... ........+||+
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~  160 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTP  160 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCc
Confidence            9999999888889999999999999999999999999999999999999999999999999987543 233345678999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA  288 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp  288 (708)
                      .|+|||++.+..++ .++|||||||++|+|++|..||.+.+..++.+.+......++..++.++.+||++||+.||.+|+
T Consensus       161 ~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~  239 (325)
T cd05602         161 EYLAPEVLHKQPYD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRL  239 (325)
T ss_pred             cccCHHHHcCCCCC-CccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCC
Confidence            99999999988775 78999999999999999999999999999989988887777778999999999999999999999


Q ss_pred             CHHH
Q psy2648         289 SLEV  292 (708)
Q Consensus       289 s~~~  292 (708)
                      ++.+
T Consensus       240 ~~~~  243 (325)
T cd05602         240 GAKD  243 (325)
T ss_pred             CCCC
Confidence            9763


No 76 
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00  E-value=4.5e-44  Score=385.74  Aligned_cols=239  Identities=33%  Similarity=0.622  Sum_probs=212.0

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||+||+|++..+++.||||++.+.... ....+.+.+|+.++.++ +||||+++++++++.+.+|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4799999999999999999999999999875432 34456678999999888 699999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcccc-CCCCCccccccCC
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~-~~~~~~~~~~Gt~  208 (708)
                      |+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.. .........+||+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTP  160 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCc
Confidence            999999988889999999999999999999999999999999999999999999999999998753 2333445688999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCC-------CCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhh
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-------STLRELRERVLRGKYRIPFYMSTDCENLLKKFLV  281 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~-------~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~  281 (708)
                      .|+|||++.+..++ .++|||||||+||+|++|..||..       .....+.+.+.....++|..++.++.++|++||.
T Consensus       161 ~y~aPE~~~~~~~~-~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~  239 (327)
T cd05617         161 NYIAPEILRGEEYG-FSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLN  239 (327)
T ss_pred             ccCCHHHHCCCCCC-chheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhc
Confidence            99999999888774 799999999999999999999953       2334566777777788999999999999999999


Q ss_pred             hCCCCCCCHH
Q psy2648         282 LNPAKRASLE  291 (708)
Q Consensus       282 ~dP~~Rps~~  291 (708)
                      .||.+|++++
T Consensus       240 ~dP~~R~~~~  249 (327)
T cd05617         240 KDPKERLGCQ  249 (327)
T ss_pred             cCHHHcCCCC
Confidence            9999999853


No 77 
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=100.00  E-value=4.2e-44  Score=392.87  Aligned_cols=255  Identities=31%  Similarity=0.544  Sum_probs=219.3

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  120 (708)
                      ....++|++.+.||+|+||.||+|++..+++.||+|++.+... .....+.+.+|+.+++.++||||++++++++++..+
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            4456789999999999999999999999999999999976432 223345577899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-
Q psy2648         121 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-  199 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-  199 (708)
                      |+|||||++|+|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus       119 ~lv~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~  197 (370)
T cd05621         119 YMVMEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM  197 (370)
T ss_pred             EEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCc
Confidence            999999999999998864 468999999999999999999999999999999999999999999999999997654322 


Q ss_pred             -CccccccCCcccccccccCCc---cCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCCHH
Q psy2648         200 -KLDTFCGSPPYAAPELFQGKK---YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK--YRIPF--YMSTD  271 (708)
Q Consensus       200 -~~~~~~Gt~~Y~APE~l~~~~---~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~--~~~p~--~~s~~  271 (708)
                       ...+.+||+.|+|||++.+..   +.+.++|||||||+||+|++|..||.+.+..+...++....  +.+|.  .++..
T Consensus       198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~  277 (370)
T cd05621         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKH  277 (370)
T ss_pred             eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHH
Confidence             234678999999999997643   23578999999999999999999999998888888887654  44554  46899


Q ss_pred             HHHHHHHhhhhCCCC--CCCHHHHh---hhh
Q psy2648         272 CENLLKKFLVLNPAK--RASLEVSG---EVT  297 (708)
Q Consensus       272 ~~~Li~~~L~~dP~~--Rps~~~~~---~~~  297 (708)
                      +++||.+||..++.+  |+++++++   |+.
T Consensus       278 ~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~  308 (370)
T cd05621         278 AKNLICAFLTDREVRLGRNGVEEIKQHPFFK  308 (370)
T ss_pred             HHHHHHHHccCchhccCCCCHHHHhcCcccC
Confidence            999999999865544  88999887   664


No 78 
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00  E-value=2.6e-43  Score=380.32  Aligned_cols=250  Identities=27%  Similarity=0.484  Sum_probs=215.6

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      .++|++++.||+|+||.||+|++..++..||+|++.... .+...+.+.+|+++|+.++||||+++++++...+.+|+||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   82 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence            468999999999999999999999999999999997542 3445567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT  203 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~-gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~  203 (708)
                      ||+++++|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++..... .....
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-~~~~~  161 (331)
T cd06649          83 EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANS  161 (331)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc-ccccc
Confidence            9999999999998888899999999999999999999986 699999999999999999999999999876543 23345


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc------------------------
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR------------------------  259 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~------------------------  259 (708)
                      .+|++.|+|||++.+..++ .++|||||||++|+|++|+.||...+..++...+..                        
T Consensus       162 ~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (331)
T cd06649         162 FVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPV  240 (331)
T ss_pred             CCCCcCcCCHhHhcCCCCC-chHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccc
Confidence            6899999999999988775 799999999999999999999987666554332211                        


Q ss_pred             ----------------------CC-CCCC-CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhh
Q psy2648         260 ----------------------GK-YRIP-FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       260 ----------------------~~-~~~p-~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                                            .. ...| ...++++.+||.+||++||++|||+++++   |+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~  305 (331)
T cd06649         241 SGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIK  305 (331)
T ss_pred             cccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHh
Confidence                                  00 0111 13578999999999999999999999987   665


No 79 
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00  E-value=2.6e-44  Score=386.94  Aligned_cols=239  Identities=34%  Similarity=0.569  Sum_probs=213.0

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHH-HHHhCCCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVR-IMKMLDHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||+||+|++..+|+.||||++.+... .......+..|.. +++.++||||++++++++..+.+|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            469999999999999999999999999976532 2233445666665 46789999999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccccccCC
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~~~Gt~  208 (708)
                      |+|..++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++... ........+||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTP  160 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCCh
Confidence            9999999888899999999999999999999999999999999999999999999999999987532 223345678999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRA  288 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp  288 (708)
                      .|+|||++.+..++ .++|||||||++|+|++|..||.+.+..++.+.+..+...++...+.++.++|++||+.||.+||
T Consensus       161 ~y~aPE~~~~~~~~-~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~  239 (325)
T cd05604         161 EYLAPEVIRKQPYD-NTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQRRL  239 (325)
T ss_pred             hhCCHHHHcCCCCC-CcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhccCHHhcC
Confidence            99999999988875 78999999999999999999999999999999999888777778899999999999999999999


Q ss_pred             CHH
Q psy2648         289 SLE  291 (708)
Q Consensus       289 s~~  291 (708)
                      ++.
T Consensus       240 ~~~  242 (325)
T cd05604         240 GAK  242 (325)
T ss_pred             CCC
Confidence            874


No 80 
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00  E-value=1.3e-44  Score=389.87  Aligned_cols=241  Identities=33%  Similarity=0.529  Sum_probs=212.2

Q ss_pred             EcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhC---CCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML---DHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        54 LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      ||+|+||+||+|++..+++.||||++.+... ..........|..++..+   +||||+++++++++...+|+||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            7999999999999999999999999976432 223344566788887765   699999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccccccCC
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~~~Gt~  208 (708)
                      |+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.... ........+||+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~  160 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTT  160 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCc
Confidence            9999999988999999999999999999999999999999999999999999999999999987543 233345678999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCHHHHHHHHHhhhhCCCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF-YMSTDCENLLKKFLVLNPAKR  287 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~-~~s~~~~~Li~~~L~~dP~~R  287 (708)
                      .|+|||++.+....+.++|||||||++|+|++|..||.+.+..++.+.+..+...+|. .+++++.+||++||..||.+|
T Consensus       161 ~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R  240 (330)
T cd05586         161 EYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHR  240 (330)
T ss_pred             cccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHC
Confidence            9999999976553458999999999999999999999999999999999988888775 478999999999999999999


Q ss_pred             C----CHHHHh
Q psy2648         288 A----SLEVSG  294 (708)
Q Consensus       288 p----s~~~~~  294 (708)
                      |    ++++++
T Consensus       241 ~~~~~~~~~ll  251 (330)
T cd05586         241 LGAHRDAVELK  251 (330)
T ss_pred             CCCCCCHHHHh
Confidence            8    466655


No 81 
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=100.00  E-value=9.8e-44  Score=375.05  Aligned_cols=247  Identities=26%  Similarity=0.432  Sum_probs=215.1

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCCh-hhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP-GSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      +|++.+.||+|+||.||++.+..+++.||||++.+..... .....+.+|+.+++.++||||+++++++.+.+.+|+|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            5899999999999999999999999999999997654322 223456789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccc
Q psy2648         126 YASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT  203 (708)
Q Consensus       126 y~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~  203 (708)
                      |+++|+|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+|||+++++.++|+|||++...........
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  160 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG  160 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence            99999999888654  4689999999999999999999999999999999999999999999999999977654444456


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLR----ELRERVLRGKYRIPFYMSTDCENLLKKF  279 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~----~l~~~i~~~~~~~p~~~s~~~~~Li~~~  279 (708)
                      .+|++.|+|||++.+..++ .++|||||||++|+|++|..||.+.+..    ++...+..+...+|...++.+.+||.+|
T Consensus       161 ~~~~~~y~aPE~~~~~~~~-~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  239 (285)
T cd05605         161 RVGTVGYMAPEVVKNERYT-FSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQL  239 (285)
T ss_pred             ccCCCCccCcHHhcCCCCC-ccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHH
Confidence            6899999999999887764 7899999999999999999999886553    3444555555566777899999999999


Q ss_pred             hhhCCCCCC-----CHHHHh
Q psy2648         280 LVLNPAKRA-----SLEVSG  294 (708)
Q Consensus       280 L~~dP~~Rp-----s~~~~~  294 (708)
                      |..||.+||     +++++.
T Consensus       240 l~~~P~~R~~~~~~~~~~l~  259 (285)
T cd05605         240 LTKDPGFRLGCRGEGAEEVK  259 (285)
T ss_pred             ccCCHHHhcCCCCCCHHHHh
Confidence            999999999     777775


No 82 
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00  E-value=1.1e-43  Score=382.48  Aligned_cols=249  Identities=27%  Similarity=0.507  Sum_probs=206.1

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC-----CEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE-----KTLY  121 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~~y  121 (708)
                      +|++.+.||+|+||.||+|.+..+++.||||++...........++.+|+++|+.++||||+++++++...     ..+|
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            69999999999999999999999999999999975433334456788999999999999999999988543     3589


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC--
Q psy2648         122 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--  199 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~--  199 (708)
                      +|||||. ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......  
T Consensus        81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~  159 (338)
T cd07859          81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT  159 (338)
T ss_pred             EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence            9999995 6899999888889999999999999999999999999999999999999999999999999987543221  


Q ss_pred             --CccccccCCcccccccccC--CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH---------------cC
Q psy2648         200 --KLDTFCGSPPYAAPELFQG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVL---------------RG  260 (708)
Q Consensus       200 --~~~~~~Gt~~Y~APE~l~~--~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~---------------~~  260 (708)
                        .....+||+.|+|||++.+  ..+ ++++|||||||++|+|++|+.||.+.+.......+.               ..
T Consensus       160 ~~~~~~~~~t~~y~aPE~~~~~~~~~-~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  238 (338)
T cd07859         160 AIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNE  238 (338)
T ss_pred             cccccCCCCCCCcCCHHHHhcccccc-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence              1234679999999999865  444 479999999999999999999998766433221111               00


Q ss_pred             -----------CCCCC-----CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhh
Q psy2648         261 -----------KYRIP-----FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       261 -----------~~~~p-----~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                                 ....+     ...++++.+||.+||+.||++|||+++++   |+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~  294 (338)
T cd07859         239 KARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFK  294 (338)
T ss_pred             hHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhh
Confidence                       00111     13567899999999999999999999988   664


No 83 
>KOG0663|consensus
Probab=100.00  E-value=1.5e-44  Score=368.61  Aligned_cols=256  Identities=28%  Similarity=0.431  Sum_probs=216.6

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--CEE
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE--KTL  120 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~  120 (708)
                      ..|..|+.+..|++|+||.||+|+++.|++.||+|.++.+.-....--.-+|||.+|.+++|||||.+-++....  +.+
T Consensus        73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i  152 (419)
T KOG0663|consen   73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI  152 (419)
T ss_pred             ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence            446789999999999999999999999999999999987653323223467999999999999999999988654  579


Q ss_pred             EEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-
Q psy2648         121 YLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-  198 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-  198 (708)
                      |||||||+. ||...+...+ +|.+.+++.++.|++.||+|||.+.|+||||||+|+|+.+.|.+||+|||||+.+... 
T Consensus       153 y~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~  231 (419)
T KOG0663|consen  153 YIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL  231 (419)
T ss_pred             eeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence            999999986 8998887665 8999999999999999999999999999999999999999999999999999988643 


Q ss_pred             CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-----------C-------
Q psy2648         199 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR-----------G-------  260 (708)
Q Consensus       199 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~-----------~-------  260 (708)
                      ......+-|..|.|||++.|.+-.+.++|+||+|||+.||+++.+-|.|.+..+-..+|.+           |       
T Consensus       232 k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~  311 (419)
T KOG0663|consen  232 KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAV  311 (419)
T ss_pred             ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchh
Confidence            3456678899999999999877666899999999999999999999999775544444432           1       


Q ss_pred             -CCCCC------------CC-CCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhhC
Q psy2648         261 -KYRIP------------FY-MSTDCENLLKKFLVLNPAKRASLEVSG---EVTLG  299 (708)
Q Consensus       261 -~~~~p------------~~-~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~~  299 (708)
                       .+.+|            .. +|....+|+..+|.+||.+|.|+++.+   |+...
T Consensus       312 k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~  367 (419)
T KOG0663|consen  312 KKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET  367 (419)
T ss_pred             hccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence             01111            11 568889999999999999999999887   77654


No 84 
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00  E-value=1.1e-43  Score=377.90  Aligned_cols=248  Identities=29%  Similarity=0.510  Sum_probs=204.1

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      .++|++.+.||+|+||.||+|++..+++.||||++...... .....+.+|+.+|+.++||||+++++++.++..+|+||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~   82 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF   82 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence            36899999999999999999999999999999999754322 22345678999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC-CCCcc
Q psy2648         125 EYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLD  202 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~-~~~~~  202 (708)
                      ||+. ++|.+++..+ +.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... .....
T Consensus        83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  161 (303)
T cd07869          83 EYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS  161 (303)
T ss_pred             ECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence            9996 6888888665 5689999999999999999999999999999999999999999999999999865432 22334


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHc--CCC---------CC------
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST-LRELRERVLR--GKY---------RI------  264 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~-~~~l~~~i~~--~~~---------~~------  264 (708)
                      ..+|++.|+|||++.+....+.++|||||||++|+|++|..||.+.. ..+..+.+..  +..         ..      
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (303)
T cd07869         162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE  241 (303)
T ss_pred             CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence            56789999999998765434578999999999999999999998753 2222222211  000         00      


Q ss_pred             ------C---------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         265 ------P---------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       265 ------p---------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                            |         ...++++.+||++||+.||.+|||+++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l  286 (303)
T cd07869         242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAAL  286 (303)
T ss_pred             cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHh
Confidence                  0         01346789999999999999999999987


No 85 
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00  E-value=3.7e-43  Score=397.99  Aligned_cols=249  Identities=35%  Similarity=0.561  Sum_probs=220.1

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCC-CcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEE
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPT-GKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~t-g~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~y  121 (708)
                      +....|.+.+.||+|+||.||+|.+..+ ++.||+|.+...  .......+.+|+++|+.++|||||+++++++.++.+|
T Consensus        64 ~~~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~  141 (478)
T PTZ00267         64 PREHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLL  141 (478)
T ss_pred             CcceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEE
Confidence            3455699999999999999999998887 788999987543  2334456778999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC
Q psy2648         122 LVMEYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP  197 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~  197 (708)
                      |||||+++|+|.+++..    ...+++.++..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.+..
T Consensus       142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~  221 (478)
T PTZ00267        142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD  221 (478)
T ss_pred             EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence            99999999999988754    34689999999999999999999999999999999999999999999999999987643


Q ss_pred             CC---CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHH
Q psy2648         198 GN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR-IPFYMSTDCE  273 (708)
Q Consensus       198 ~~---~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~-~p~~~s~~~~  273 (708)
                      ..   ...+.+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.+..++...+..+.+. +|..++.++.
T Consensus       222 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  300 (478)
T PTZ00267        222 SVSLDVASSFCGTPYYLAPELWERKRYS-KKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMK  300 (478)
T ss_pred             ccccccccccCCCccccCHhHhCCCCCC-cHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHH
Confidence            32   23467899999999999888774 7899999999999999999999999998988888887664 5677899999


Q ss_pred             HHHHHhhhhCCCCCCCHHHHh
Q psy2648         274 NLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       274 ~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +||.+||..||++||+++++.
T Consensus       301 ~li~~~L~~dP~~Rps~~~~l  321 (478)
T PTZ00267        301 ALLDPLLSKNPALRPTTQQLL  321 (478)
T ss_pred             HHHHHHhccChhhCcCHHHHH
Confidence            999999999999999999876


No 86 
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00  E-value=4.4e-44  Score=385.64  Aligned_cols=247  Identities=30%  Similarity=0.519  Sum_probs=215.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ++|++.+.||+|+||.||+|++..+++.||||++++... .....+.+.+|+.+++.++||||+++++++++...+||||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            369999999999999999999999999999999986543 2334456778999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC--c
Q psy2648         125 EYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--L  201 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~--~  201 (708)
                      ||+++|+|.+++... +.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++........  .
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~  160 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS  160 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceee
Confidence            999999999999876 6899999999999999999999999999999999999999999999999999976543322  2


Q ss_pred             cccccCCcccccccccC------CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCCHH
Q psy2648         202 DTFCGSPPYAAPELFQG------KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK--YRIPF--YMSTD  271 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~------~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~--~~~p~--~~s~~  271 (708)
                      ...+||+.|+|||++..      ..+ +.++|||||||++|+|++|..||...+..+....+....  ..+|.  ..+++
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~-~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  239 (330)
T cd05601         161 KLPVGTPDYIAPEVLTTMNGDGKGTY-GVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSD  239 (330)
T ss_pred             ecccCCccccCHHHhccccccccCCC-CCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHH
Confidence            34579999999999873      333 478999999999999999999999988888778777643  23333  57899


Q ss_pred             HHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         272 CENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       272 ~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +.+||++||. ||.+||+++++.
T Consensus       240 ~~~li~~ll~-~p~~R~t~~~l~  261 (330)
T cd05601         240 FLDLIQSLLC-GQKERLGYEGLC  261 (330)
T ss_pred             HHHHHHHHcc-ChhhCCCHHHHh
Confidence            9999999998 999999999887


No 87 
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00  E-value=1.3e-43  Score=383.14  Aligned_cols=248  Identities=25%  Similarity=0.439  Sum_probs=206.3

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEc-----CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeC-
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHV-----PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIETE-  117 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~-----~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~-  117 (708)
                      -++|++.+.||+|+||.||+|.+.     .+++.||||++.... .....+.+.+|+.+|+.+ +|||||++++++... 
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACTKPN   84 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence            358999999999999999999853     456789999987542 334456788999999999 899999999988764 


Q ss_pred             CEEEEEEeccCCCChHHHHHHc----------------------------------------------------------
Q psy2648         118 KTLYLVMEYASGGEVFDYLVLH----------------------------------------------------------  139 (708)
Q Consensus       118 ~~~ylVmEy~~gg~L~~~i~~~----------------------------------------------------------  139 (708)
                      ..+|+||||+++|+|.+++...                                                          
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence            4689999999999999998753                                                          


Q ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC---ccccccCCcccc
Q psy2648         140 ----GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAA  212 (708)
Q Consensus       140 ----~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~---~~~~~Gt~~Y~A  212 (708)
                          ..+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......   .....+++.|+|
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  244 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA  244 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence                2377788899999999999999999999999999999999999999999999976532211   123345678999


Q ss_pred             cccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHH-HHHHHHHcCC-CCCCCCCCHHHHHHHHHhhhhCCCCCCC
Q psy2648         213 PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLR-ELRERVLRGK-YRIPFYMSTDCENLLKKFLVLNPAKRAS  289 (708)
Q Consensus       213 PE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~-~l~~~i~~~~-~~~p~~~s~~~~~Li~~~L~~dP~~Rps  289 (708)
                      ||++.+..++ .++|||||||+||+|++ |..||.+.... .+...+..+. ...|...++++.+||.+||..||.+|||
T Consensus       245 PE~~~~~~~~-~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs  323 (338)
T cd05102         245 PESIFDKVYT-TQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPT  323 (338)
T ss_pred             cHHhhcCCCC-cccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcC
Confidence            9999888775 79999999999999997 99999876543 3444555443 3456778899999999999999999999


Q ss_pred             HHHHh
Q psy2648         290 LEVSG  294 (708)
Q Consensus       290 ~~~~~  294 (708)
                      ++++.
T Consensus       324 ~~el~  328 (338)
T cd05102         324 FSALV  328 (338)
T ss_pred             HHHHH
Confidence            99887


No 88 
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00  E-value=3e-43  Score=399.89  Aligned_cols=250  Identities=32%  Similarity=0.551  Sum_probs=223.2

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC-----
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK-----  118 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-----  118 (708)
                      ..++|++.+.||+|+||.||+|++..+++.||||++............+.+|+.+|..++|+||+++++.+....     
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~  109 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE  109 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence            346999999999999999999999999999999999877666666777889999999999999999998775432     


Q ss_pred             ---EEEEEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccC
Q psy2648         119 ---TLYLVMEYASGGEVFDYLVLH----GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF  191 (708)
Q Consensus       119 ---~~ylVmEy~~gg~L~~~i~~~----~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGl  191 (708)
                         .+++||||+++|+|.+++...    ..+++.++..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus       110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGl  189 (496)
T PTZ00283        110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGF  189 (496)
T ss_pred             cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEeccc
Confidence               478999999999999998653    4689999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCC---CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC-CCCC
Q psy2648         192 SNEFTPG---NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR-IPFY  267 (708)
Q Consensus       192 s~~~~~~---~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~-~p~~  267 (708)
                      ++.+...   ....+.+||+.|+|||++.+..|+ .++|||||||+||+|++|+.||.+.+..++...+..+.+. +|..
T Consensus       190 s~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s-~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  268 (496)
T PTZ00283        190 SKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYS-KKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPS  268 (496)
T ss_pred             CeeccccccccccccccCCcceeCHHHhCCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCC
Confidence            9765422   223567899999999999988775 7999999999999999999999999999988888887653 6778


Q ss_pred             CCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         268 MSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       268 ~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .++++.+||.+||..||.+||++.+++
T Consensus       269 ~~~~l~~li~~~L~~dP~~RPs~~ell  295 (496)
T PTZ00283        269 ISPEMQEIVTALLSSDPKRRPSSSKLL  295 (496)
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHH
Confidence            899999999999999999999999876


No 89 
>KOG0604|consensus
Probab=100.00  E-value=3.8e-45  Score=367.91  Aligned_cols=251  Identities=35%  Similarity=0.577  Sum_probs=221.6

Q ss_pred             CCCCccCCeEEE-eEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeC
Q psy2648          40 RDEPHIGKYKLL-KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIETE  117 (708)
Q Consensus        40 ~~~~~~~~Y~i~-~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~  117 (708)
                      .+...+++|.+- .+||-|-.|+|..|.|+.||+++|+|++.-       ..+..+|+++.-+. .|||||+++++|+..
T Consensus        55 k~~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-------s~KARrEVeLHw~~s~h~~iV~IidVyeNs  127 (400)
T KOG0604|consen   55 KEYSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-------SPKARREVELHWMASGHPHIVSIIDVYENS  127 (400)
T ss_pred             hcccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-------CHHHHhHhhhhhhhcCCCceEEeehhhhhh
Confidence            444567789885 689999999999999999999999999853       24567898886555 599999999998753


Q ss_pred             ----CEEEEEEeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCC---CcEEEEe
Q psy2648         118 ----KTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE---MNIKIAD  188 (708)
Q Consensus       118 ----~~~ylVmEy~~gg~L~~~i~~~~~--l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~---~~iKL~D  188 (708)
                          ..+.||||.++||+|++.|..++.  ++|.+|..+++||+.|+.|||+.+|.||||||||+|....   -.+||+|
T Consensus       128 ~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtD  207 (400)
T KOG0604|consen  128 YQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTD  207 (400)
T ss_pred             ccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecc
Confidence                468899999999999999999876  9999999999999999999999999999999999999754   4689999


Q ss_pred             ccCccccCCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHcCCCCC
Q psy2648         189 FGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST----LRELRERVLRGKYRI  264 (708)
Q Consensus       189 FGls~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~----~~~l~~~i~~~~~~~  264 (708)
                      ||+++.-.....+.+-|-||.|.|||++-..+|+ ..+|+||+||++|.|+||.+||....    ...+..+|..|.|.+
T Consensus       208 fGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKyd-kscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~F  286 (400)
T KOG0604|consen  208 FGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEF  286 (400)
T ss_pred             cccccccCCCccccCCcccccccCHHHhCchhcC-CCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccC
Confidence            9999987766778899999999999999988886 78999999999999999999998643    356889999999999


Q ss_pred             CC----CCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         265 PF----YMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       265 p~----~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                      |.    .+|++++|+|++||..+|.+|.|+++.+   |+..
T Consensus       287 P~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~  327 (400)
T KOG0604|consen  287 PEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQ  327 (400)
T ss_pred             CChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence            85    4789999999999999999999999988   7753


No 90 
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00  E-value=2.1e-43  Score=387.45  Aligned_cols=252  Identities=32%  Similarity=0.563  Sum_probs=215.6

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  120 (708)
                      ....++|++.+.||+|+||.||+|++..+++.||+|++.+... .....+.+.+|+.+++.++||||+++++++++...+
T Consensus        39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (371)
T cd05622          39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL  118 (371)
T ss_pred             CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence            3345799999999999999999999999999999999976432 223345577899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-
Q psy2648         121 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-  199 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-  199 (708)
                      |+|||||++|+|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus       119 ~lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~  197 (371)
T cd05622         119 YMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM  197 (371)
T ss_pred             EEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCc
Confidence            999999999999998864 468999999999999999999999999999999999999999999999999997654322 


Q ss_pred             -CccccccCCcccccccccCCc---cCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCCHH
Q psy2648         200 -KLDTFCGSPPYAAPELFQGKK---YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK--YRIPF--YMSTD  271 (708)
Q Consensus       200 -~~~~~~Gt~~Y~APE~l~~~~---~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~--~~~p~--~~s~~  271 (708)
                       ...+.+||+.|+|||++.+..   +.+.++|||||||+||+|++|..||.+.+.......|....  ..+|.  .++.+
T Consensus       198 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  277 (371)
T cd05622         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE  277 (371)
T ss_pred             ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHH
Confidence             234678999999999997643   23578999999999999999999999999888888887654  33443  57899


Q ss_pred             HHHHHHHhhhhCCCC--CCCHHHHh
Q psy2648         272 CENLLKKFLVLNPAK--RASLEVSG  294 (708)
Q Consensus       272 ~~~Li~~~L~~dP~~--Rps~~~~~  294 (708)
                      +++||.+||..++.+  |+++++++
T Consensus       278 ~~~li~~~L~~~~~r~~r~~~~ei~  302 (371)
T cd05622         278 AKNLICAFLTDREVRLGRNGVEEIK  302 (371)
T ss_pred             HHHHHHHHcCChhhhcCCCCHHHHh
Confidence            999999999844433  77888877


No 91 
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00  E-value=8.5e-43  Score=380.35  Aligned_cols=252  Identities=29%  Similarity=0.495  Sum_probs=209.6

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC----
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK----  118 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----  118 (708)
                      ..+++|++.+.||+|+||.||+|.+..+|+.||||++.+..........+.+|+.+++.++||||+++++++....    
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   97 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE   97 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence            3468999999999999999999999999999999999766544455667889999999999999999999986543    


Q ss_pred             --EEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC
Q psy2648         119 --TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT  196 (708)
Q Consensus       119 --~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~  196 (708)
                        .+|+||||+.+ +|.+.+.  ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        98 ~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~  174 (359)
T cd07876          98 FQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC  174 (359)
T ss_pred             cceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence              57999999975 5666653  458999999999999999999999999999999999999999999999999997654


Q ss_pred             CCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH------------------
Q psy2648         197 PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVL------------------  258 (708)
Q Consensus       197 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~------------------  258 (708)
                      .........||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.+..+....+.                  
T Consensus       175 ~~~~~~~~~~t~~y~aPE~~~~~~~~-~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (359)
T cd07876         175 TNFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTV  253 (359)
T ss_pred             cCccCCCCcccCCCCCchhccCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence            44444567899999999999988875 78999999999999999999998766433222111                  


Q ss_pred             ----cCCCCC--------------------CCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         259 ----RGKYRI--------------------PFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       259 ----~~~~~~--------------------p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                          ......                    +...++++.+||.+||+.||++|||+++++   |+..
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence                111110                    112457899999999999999999999988   7754


No 92 
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00  E-value=2.9e-43  Score=370.55  Aligned_cols=243  Identities=33%  Similarity=0.508  Sum_probs=209.4

Q ss_pred             EcccCceEEEEEEEcCCCcEEEEEEeccCCCCh-hhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCCh
Q psy2648          54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP-GSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEV  132 (708)
Q Consensus        54 LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg~L  132 (708)
                      ||+|+||+||+|.+..+++.||||++.+..... ...+.+..|+++|+.++||||++++++++.+..+|+||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            699999999999999999999999997654322 2345677899999999999999999999999999999999999999


Q ss_pred             HHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-CccccccC
Q psy2648         133 FDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGS  207 (708)
Q Consensus       133 ~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~~~Gt  207 (708)
                      .+++..    +..+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++.....+. ......||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~  160 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGT  160 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCC
Confidence            888743    3468999999999999999999999999999999999999999999999999987654332 23456899


Q ss_pred             CcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhC
Q psy2648         208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST----LRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN  283 (708)
Q Consensus       208 ~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~----~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~d  283 (708)
                      +.|+|||++.+..++ .++|||||||++|+|++|+.||....    ..++...+......+|...++++.+|+.+||+.|
T Consensus       161 ~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  239 (280)
T cd05608         161 PGFMAPELLQGEEYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKD  239 (280)
T ss_pred             cCccCHHHhcCCCCC-ccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCC
Confidence            999999999988875 78999999999999999999998643    3445556666666677788999999999999999


Q ss_pred             CCCCC-----CHHHHh---hhh
Q psy2648         284 PAKRA-----SLEVSG---EVT  297 (708)
Q Consensus       284 P~~Rp-----s~~~~~---~~~  297 (708)
                      |++||     +++++.   |+.
T Consensus       240 P~~R~~~~~~~~~~~l~h~~~~  261 (280)
T cd05608         240 PEKRLGFRDGNCDGLRTHPLFR  261 (280)
T ss_pred             HHHhcCCCCCCHHHHhcChhhh
Confidence            99999     556665   664


No 93 
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00  E-value=3.8e-43  Score=370.26  Aligned_cols=246  Identities=29%  Similarity=0.450  Sum_probs=205.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcC-CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC---CCCCeeeEEEEEE-----eC
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVP-TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML---DHPNIVKLFQVIE-----TE  117 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~-tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~-----~~  117 (708)
                      +|++.+.||+|+||+||+|++.. +++.||||++............+.+|+.+++.+   +||||+++++++.     ..
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            79999999999999999999865 468899999876544333344566788887765   6999999999985     24


Q ss_pred             CEEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcccc
Q psy2648         118 KTLYLVMEYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF  195 (708)
Q Consensus       118 ~~~ylVmEy~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~  195 (708)
                      ..+|+||||+. ++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY  160 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence            56999999997 5899998764  35899999999999999999999999999999999999999999999999999776


Q ss_pred             CCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-----C-------
Q psy2648         196 TPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-----R-------  263 (708)
Q Consensus       196 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~-----~-------  263 (708)
                      .........+||+.|+|||++.+..++ .++|||||||++|+|++|..||.+.+..+....+....-     .       
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  239 (290)
T cd07862         161 SFQMALTSVVVTLWYRAPEVLLQSSYA-TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL  239 (290)
T ss_pred             cCCcccccccccccccChHHHhCCCCC-CccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcc
Confidence            544445567899999999999887775 789999999999999999999998877666666643210     0       


Q ss_pred             ---------------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         264 ---------------IPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       264 ---------------~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                     +...+++++.+||.+||+.||++|||+.+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l  285 (290)
T cd07862         240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL  285 (290)
T ss_pred             cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence                           0123577889999999999999999999876


No 94 
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00  E-value=4.9e-43  Score=392.95  Aligned_cols=247  Identities=32%  Similarity=0.412  Sum_probs=204.6

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC-------
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE-------  117 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-------  117 (708)
                      .++|++++.||+|+||.||+|.+..+++.||||++.+..      ....+|+.+|+.++|||||++++++...       
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~  138 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK  138 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence            457999999999999999999999999999999886432      1234799999999999999999887432       


Q ss_pred             -CEEEEEEeccCCCChHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCC-cEEEEeccC
Q psy2648         118 -KTLYLVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM-NIKIADFGF  191 (708)
Q Consensus       118 -~~~ylVmEy~~gg~L~~~i~----~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~-~iKL~DFGl  191 (708)
                       ..+|+||||+++ +|.+++.    ....+++..++.++.||+.||+|||++||+||||||+||||+.++ .+||+|||+
T Consensus       139 ~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGl  217 (440)
T PTZ00036        139 NIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGS  217 (440)
T ss_pred             ceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecccc
Confidence             257899999985 6776664    245799999999999999999999999999999999999999765 699999999


Q ss_pred             ccccCCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-----------
Q psy2648         192 SNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-----------  260 (708)
Q Consensus       192 s~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-----------  260 (708)
                      ++.+..+......+||+.|+|||++.+....+.++|||||||+||+|++|.+||.+.+..+...++...           
T Consensus       218 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  297 (440)
T PTZ00036        218 AKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKE  297 (440)
T ss_pred             chhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence            987765555556789999999999876543358999999999999999999999987665444433220           


Q ss_pred             ------CC------------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         261 ------KY------------RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       261 ------~~------------~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                            .+            .+|...++++.+||++||++||.+|||+.+++   |+..
T Consensus       298 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~  356 (440)
T PTZ00036        298 MNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD  356 (440)
T ss_pred             hchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence                  01            12445678999999999999999999999988   7653


No 95 
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00  E-value=4.6e-43  Score=378.50  Aligned_cols=249  Identities=31%  Similarity=0.550  Sum_probs=212.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ++|++++.||+|+||.||++++..+++.||||++.+... .....+.+.+|+.+++.++||||+++++++++++.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            479999999999999999999999999999999976432 2334456788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC--c
Q psy2648         125 EYASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--L  201 (708)
Q Consensus       125 Ey~~gg~L~~~i~~-~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~--~  201 (708)
                      ||+++|+|.+++.. ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++........  .
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS  160 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc
Confidence            99999999999976 45799999999999999999999999999999999999999999999999999876543322  2


Q ss_pred             cccccCCcccccccccC----CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--CCCCC---CCCHHH
Q psy2648         202 DTFCGSPPYAAPELFQG----KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK--YRIPF---YMSTDC  272 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~----~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~--~~~p~---~~s~~~  272 (708)
                      ...+||+.|+|||++.+    ....+.++|||||||++|+|++|+.||.+.+..+....+....  +.+|.   ..++++
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  240 (331)
T cd05597         161 NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEA  240 (331)
T ss_pred             cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHH
Confidence            23579999999999973    2223578999999999999999999999988888877776543  33332   468999


Q ss_pred             HHHHHHhhhhCCCC--CCCHHHHh
Q psy2648         273 ENLLKKFLVLNPAK--RASLEVSG  294 (708)
Q Consensus       273 ~~Li~~~L~~dP~~--Rps~~~~~  294 (708)
                      ++||++||..++.+  |+++++++
T Consensus       241 ~~li~~ll~~~~~r~~r~~~~~~l  264 (331)
T cd05597         241 KDLIRRLICSPETRLGRNGLQDFK  264 (331)
T ss_pred             HHHHHHHccCcccccCCCCHHHHh
Confidence            99999999764444  78998887


No 96 
>KOG0660|consensus
Probab=100.00  E-value=1.2e-43  Score=367.37  Aligned_cols=246  Identities=29%  Similarity=0.510  Sum_probs=209.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEe-----CCEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIET-----EKTLY  121 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-----~~~~y  121 (708)
                      .|..++.||+|+||.|+.|.+..||+.||||.|.....+.-..++.+||+++|+.++|+|||.+++++..     -+.+|
T Consensus        23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY  102 (359)
T KOG0660|consen   23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY  102 (359)
T ss_pred             eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence            4666899999999999999999999999999998766667778899999999999999999999999876     25799


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC---C
Q psy2648         122 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP---G  198 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~---~  198 (708)
                      +|+|+++ .||...|+.+..++++.++.++.||+.||.|+|+.+|+||||||.|+|++.+..+||+|||||+....   .
T Consensus       103 iV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~  181 (359)
T KOG0660|consen  103 LVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFED  181 (359)
T ss_pred             EehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcc
Confidence            9999994 58888777776799999999999999999999999999999999999999999999999999987753   4


Q ss_pred             CCccccccCCcccccccccC-CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHH---------------HHHH----
Q psy2648         199 NKLDTFCGSPPYAAPELFQG-KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELR---------------ERVL----  258 (708)
Q Consensus       199 ~~~~~~~Gt~~Y~APE~l~~-~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~---------------~~i~----  258 (708)
                      ..++..+.|..|.|||++.. ..| +.++||||+||||.||++|+.-|.|.+.-+-.               .+|.    
T Consensus       182 ~~mTeYVaTRWYRAPElll~~~~Y-t~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~a  260 (359)
T KOG0660|consen  182 GFMTEYVATRWYRAPELLLNSSEY-TKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKA  260 (359)
T ss_pred             cchhcceeeeeecCHHHHhccccc-cchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHH
Confidence            45567889999999999754 455 58999999999999999999999986532222               2222    


Q ss_pred             ----cCCCC---CC-----CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         259 ----RGKYR---IP-----FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       259 ----~~~~~---~p-----~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                          +.-..   .|     ...++++.||+.+||..||.+|+|+++++
T Consensus       261 r~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL  308 (359)
T KOG0660|consen  261 RPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEAL  308 (359)
T ss_pred             HHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHh
Confidence                11111   11     25789999999999999999999999987


No 97 
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00  E-value=1.3e-42  Score=375.34  Aligned_cols=250  Identities=27%  Similarity=0.489  Sum_probs=212.9

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      -++|++.+.||+|+||.||+|.+..+++.||+|++.... .......+.+|+++|+.++||||+++++++.+.+.+|+||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   82 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence            468999999999999999999999999999999987643 3344567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT  203 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~-gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~  203 (708)
                      ||+++|+|.+++...+.+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++..... .....
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~-~~~~~  161 (333)
T cd06650          83 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANS  161 (333)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh-hcccc
Confidence            9999999999998888899999999999999999999985 799999999999999999999999999875532 22345


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH--------------------------
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERV--------------------------  257 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i--------------------------  257 (708)
                      .+|++.|+|||++.+..++ .++|||||||++|+|++|+.||......++...+                          
T Consensus       162 ~~~~~~y~aPE~~~~~~~~-~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (333)
T cd06650         162 FVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSS  240 (333)
T ss_pred             CCCCccccCHHHhcCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhh
Confidence            6899999999999887764 7899999999999999999999876544432211                          


Q ss_pred             ------------------HcCC-CCCCC-CCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhh
Q psy2648         258 ------------------LRGK-YRIPF-YMSTDCENLLKKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       258 ------------------~~~~-~~~p~-~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                                        .... ...+. ..+.++.+||.+||++||++|||+++++   |+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~  303 (333)
T cd06650         241 YGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIK  303 (333)
T ss_pred             hcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHh
Confidence                              1111 11111 2567899999999999999999999987   664


No 98 
>KOG0607|consensus
Probab=100.00  E-value=1.7e-44  Score=365.54  Aligned_cols=250  Identities=36%  Similarity=0.583  Sum_probs=219.0

Q ss_pred             CCeEEE-eEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEEE
Q psy2648          46 GKYKLL-KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        46 ~~Y~i~-~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ylV  123 (708)
                      +-|++. +.||+|+|+.|--|....||.+||||+|+|..  .....+++||++++.+.+ |+||++|+++|+++..+|||
T Consensus        77 d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLV  154 (463)
T KOG0607|consen   77 DMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLV  154 (463)
T ss_pred             HHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC--chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEE
Confidence            346664 68999999999999999999999999999873  345678999999999875 99999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCc---EEEEeccCccccCCC--
Q psy2648         124 MEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPG--  198 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~---iKL~DFGls~~~~~~--  198 (708)
                      ||-+.||.|..+|.++..|+|.+|..+.++|+.||.|||.+||.||||||||||..+...   ||||||-|.......  
T Consensus       155 fEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~  234 (463)
T KOG0607|consen  155 FEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNND  234 (463)
T ss_pred             EecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCC
Confidence            999999999999999999999999999999999999999999999999999999976654   799999987543211  


Q ss_pred             ------CCccccccCCccccccccc-----CCccCCCchhHHHHHHHHHHHHcCCCCCCCC---------------CHHH
Q psy2648         199 ------NKLDTFCGSPPYAAPELFQ-----GKKYDGPEVDVWSLGVILYTLVSGSLPFDGS---------------TLRE  252 (708)
Q Consensus       199 ------~~~~~~~Gt~~Y~APE~l~-----~~~~~~~~~DIWSlGvilyelltG~~Pf~~~---------------~~~~  252 (708)
                            ..+.+-||+..|||||++.     ...|+ .++|.||||||||.||+|.+||.|.               -...
T Consensus       235 ~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YD-KrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~  313 (463)
T KOG0607|consen  235 CSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYD-KRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNK  313 (463)
T ss_pred             CCCCCCccccCcccchhhcchhHHhhhcccccccc-ccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHH
Confidence                  2355789999999999873     23454 7899999999999999999999863               1467


Q ss_pred             HHHHHHcCCCCCCC----CCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         253 LRERVLRGKYRIPF----YMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       253 l~~~i~~~~~~~p~----~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                      +.+.|..|+|.+|.    ++|.+++|||+.+|..|+.+|.++.+..   |++.
T Consensus       314 LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~  366 (463)
T KOG0607|consen  314 LFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQR  366 (463)
T ss_pred             HHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccc
Confidence            89999999999995    5899999999999999999999988766   6653


No 99 
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00  E-value=5.3e-43  Score=383.91  Aligned_cols=251  Identities=25%  Similarity=0.427  Sum_probs=212.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC-----EEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK-----TLY  121 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-----~~y  121 (708)
                      .|++++.||+|+||.||+|.+..+++.||||++..........+++.+|+++|+.++||||+++++++....     .+|
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            478999999999999999999999999999998765444445567889999999999999999999998876     899


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC--C
Q psy2648         122 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG--N  199 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~--~  199 (708)
                      +||||+. ++|.+++.....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....  .
T Consensus        81 lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~  159 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK  159 (372)
T ss_pred             EEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence            9999997 589998888888999999999999999999999999999999999999999999999999999765322  2


Q ss_pred             CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc--------------------
Q psy2648         200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR--------------------  259 (708)
Q Consensus       200 ~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~--------------------  259 (708)
                      ......+++.|+|||++.+....+.++|||||||++|+|++|+.||.+.+..+....|..                    
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~  239 (372)
T cd07853         160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAH  239 (372)
T ss_pred             cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHH
Confidence            233456899999999998765445789999999999999999999998776554443321                    


Q ss_pred             ---CCC---------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         260 ---GKY---------RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       260 ---~~~---------~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                         ...         .+....++++.+||.+||+.||.+|||+++++   |+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  293 (372)
T cd07853         240 ILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE  293 (372)
T ss_pred             HHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence               111         12234578999999999999999999999987   7654


No 100
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00  E-value=5e-43  Score=378.19  Aligned_cols=248  Identities=30%  Similarity=0.544  Sum_probs=212.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ++|++.+.||+|+||.||++++..+++.||||++.+... .......+.+|+.+++.++||||+++++++++++.+||||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            479999999999999999999999999999999976422 2233445778999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC--c
Q psy2648         125 EYASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--L  201 (708)
Q Consensus       125 Ey~~gg~L~~~i~~-~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~--~  201 (708)
                      ||++||+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........  .
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  160 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS  160 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee
Confidence            99999999999987 46799999999999999999999999999999999999999999999999999876543322  2


Q ss_pred             cccccCCcccccccccC-----CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--CCCCC---CCCHH
Q psy2648         202 DTFCGSPPYAAPELFQG-----KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK--YRIPF---YMSTD  271 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~-----~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~--~~~p~---~~s~~  271 (708)
                      ...+||+.|+|||++.+     ..+ +.++|||||||+||+|++|+.||.+.+..+...++....  +.+|.   .++++
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~-~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~  239 (331)
T cd05624         161 SVAVGTPDYISPEILQAMEDGMGKY-GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEE  239 (331)
T ss_pred             ccccCCcccCCHHHHhccccCCCCC-CCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHH
Confidence            34689999999999875     234 478999999999999999999999988888888887654  33443   35899


Q ss_pred             HHHHHHHhhhhCCCC--CCCHHHHh
Q psy2648         272 CENLLKKFLVLNPAK--RASLEVSG  294 (708)
Q Consensus       272 ~~~Li~~~L~~dP~~--Rps~~~~~  294 (708)
                      +.+||.+||..++++  |+++++++
T Consensus       240 ~~~li~~ll~~~~~~~~~~~~~~~~  264 (331)
T cd05624         240 AKDLIQRLICSRERRLGQNGIEDFK  264 (331)
T ss_pred             HHHHHHHHccCchhhcCCCCHHHHh
Confidence            999999999976654  46787776


No 101
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=1.6e-42  Score=382.99  Aligned_cols=246  Identities=24%  Similarity=0.372  Sum_probs=204.4

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYL  122 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~yl  122 (708)
                      ...++|++++.||+|+||.||+|.+..+++.||||+...        ..+.+|+++|+.|+|||||++++++..+...|+
T Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~l  160 (391)
T PHA03212         89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCL  160 (391)
T ss_pred             cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEE
Confidence            445689999999999999999999999999999997532        346789999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC--CCC
Q psy2648         123 VMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP--GNK  200 (708)
Q Consensus       123 VmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~--~~~  200 (708)
                      |||++. ++|..++.....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....  ...
T Consensus       161 v~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~  239 (391)
T PHA03212        161 ILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANK  239 (391)
T ss_pred             EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccc
Confidence            999995 68999998888899999999999999999999999999999999999999999999999999865322  123


Q ss_pred             ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCC-------HHHHHHHH----------------
Q psy2648         201 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST-------LRELRERV----------------  257 (708)
Q Consensus       201 ~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~-------~~~l~~~i----------------  257 (708)
                      ....+||+.|+|||++.+..|+ +++|||||||+||+|++|..||....       .......+                
T Consensus       240 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~  318 (391)
T PHA03212        240 YYGWAGTIATNAPELLARDPYG-PAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ  318 (391)
T ss_pred             cccccCccCCCChhhhcCCCCC-cHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence            3457899999999999888774 89999999999999999998875321       11111111                


Q ss_pred             ----------HcCCCCCC---------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         258 ----------LRGKYRIP---------FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       258 ----------~~~~~~~p---------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                                .......|         ..++.++.+||.+||+.||.+|||+++++   |+..
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~  381 (391)
T PHA03212        319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD  381 (391)
T ss_pred             HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence                      11111111         12456899999999999999999999987   7653


No 102
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00  E-value=6.4e-43  Score=380.59  Aligned_cols=252  Identities=28%  Similarity=0.445  Sum_probs=210.6

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEE
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~y  121 (708)
                      ......|++++.||+|+||.||+|++..+++.||||++.... .....+.+.+|+++|+.++||||++++++++..+.+|
T Consensus        70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  148 (353)
T PLN00034         70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQ  148 (353)
T ss_pred             CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEE
Confidence            344678999999999999999999999999999999996543 3344567889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CC
Q psy2648         122 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NK  200 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~  200 (708)
                      +||||+.+|+|.+.    ....+..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... ..
T Consensus       149 lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~  224 (353)
T PLN00034        149 VLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP  224 (353)
T ss_pred             EEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence            99999999998653    34678888999999999999999999999999999999999999999999999765432 22


Q ss_pred             ccccccCCcccccccccC----CccCCCchhHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHcC-CCCCCCCCCHHH
Q psy2648         201 LDTFCGSPPYAAPELFQG----KKYDGPEVDVWSLGVILYTLVSGSLPFDGST---LRELRERVLRG-KYRIPFYMSTDC  272 (708)
Q Consensus       201 ~~~~~Gt~~Y~APE~l~~----~~~~~~~~DIWSlGvilyelltG~~Pf~~~~---~~~l~~~i~~~-~~~~p~~~s~~~  272 (708)
                      .....||+.|+|||++..    ..+.+.++|||||||++|+|++|+.||....   ...+...+... ....+...+.++
T Consensus       225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  304 (353)
T PLN00034        225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREF  304 (353)
T ss_pred             ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHH
Confidence            345689999999999853    2344568999999999999999999997432   23333333322 334566789999


Q ss_pred             HHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         273 ENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       273 ~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                      .+||.+||..||++||++++++   |+..
T Consensus       305 ~~li~~~l~~~P~~Rpt~~ell~hp~~~~  333 (353)
T PLN00034        305 RHFISCCLQREPAKRWSAMQLLQHPFILR  333 (353)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCccccc
Confidence            9999999999999999999988   6643


No 103
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00  E-value=3.4e-42  Score=405.74  Aligned_cols=264  Identities=31%  Similarity=0.526  Sum_probs=220.9

Q ss_pred             CCCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEe--
Q psy2648          39 ERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIET--  116 (708)
Q Consensus        39 ~~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--  116 (708)
                      ...+..+++|++++.||+|+||.||+|++..+++.||+|++............+.+|+.+|+.|+|||||+++++|..  
T Consensus         6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~   85 (1021)
T PTZ00266          6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA   85 (1021)
T ss_pred             cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence            455677889999999999999999999999999999999998766665666788999999999999999999998854  


Q ss_pred             CCEEEEEEeccCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC-------CceecCCCCCCEEEcC-----
Q psy2648         117 EKTLYLVMEYASGGEVFDYLVLH----GRMKEKEARAKFRQIVSAVQYCHQK-------KIIHRDLKAENLLLDS-----  180 (708)
Q Consensus       117 ~~~~ylVmEy~~gg~L~~~i~~~----~~l~e~~~~~i~~QI~~aL~yLH~~-------gIvHRDLKPeNILld~-----  180 (708)
                      ...+|||||||++|+|.++|...    +.+++..++.|+.||+.||.|||+.       +||||||||+||||+.     
T Consensus        86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l  165 (1021)
T PTZ00266         86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI  165 (1021)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence            45799999999999999998653    5799999999999999999999984       4999999999999964     


Q ss_pred             ------------CCcEEEEeccCccccCCCCCccccccCCcccccccccCCc-cCCCchhHHHHHHHHHHHHcCCCCCCC
Q psy2648         181 ------------EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK-YDGPEVDVWSLGVILYTLVSGSLPFDG  247 (708)
Q Consensus       181 ------------~~~iKL~DFGls~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~~~~~~DIWSlGvilyelltG~~Pf~~  247 (708)
                                  .+.+||+|||++............+||+.|+|||++.+.. ..++++||||||||||+|++|..||..
T Consensus       166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~  245 (1021)
T PTZ00266        166 GKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK  245 (1021)
T ss_pred             ccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence                        2358999999998765444455678999999999986532 224789999999999999999999976


Q ss_pred             CC-HHHHHHHHHcCCCCCC-CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhhCCCCc
Q psy2648         248 ST-LRELRERVLRGKYRIP-FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTLGGAPV  303 (708)
Q Consensus       248 ~~-~~~l~~~i~~~~~~~p-~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~~~~~~  303 (708)
                      .+ ...+...+..+ ..+| ...+.++.+||.+||..||.+||++.+++   |+.....++
T Consensus       246 ~~~~~qli~~lk~~-p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~p~  305 (1021)
T PTZ00266        246 ANNFSQLISELKRG-PDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGPPV  305 (1021)
T ss_pred             CCcHHHHHHHHhcC-CCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCCCc
Confidence            54 44555555444 3333 35689999999999999999999999987   776544443


No 104
>KOG0594|consensus
Probab=100.00  E-value=3.5e-43  Score=364.97  Aligned_cols=249  Identities=32%  Similarity=0.498  Sum_probs=212.8

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCC-eeeEEEEEEeCC-----
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN-IVKLFQVIETEK-----  118 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~-----  118 (708)
                      ...|+.+++||+|+||+||+|+.+.+|+.||+|.+.-.......-....+|+.+|+.|+|+| ||+|++++.+++     
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            45688888999999999999999999999999999866443223345789999999999999 999999998877     


Q ss_pred             -EEEEEEeccCCCChHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcc
Q psy2648         119 -TLYLVMEYASGGEVFDYLVLHG----RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN  193 (708)
Q Consensus       119 -~~ylVmEy~~gg~L~~~i~~~~----~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~  193 (708)
                       .+|+|+||+.. ||..|+....    .++...++.+++||+.||+|||+++|+||||||+||||++.|.+||+|||+|+
T Consensus        90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAr  168 (323)
T KOG0594|consen   90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLAR  168 (323)
T ss_pred             ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHH
Confidence             89999999975 9999998766    57888999999999999999999999999999999999999999999999999


Q ss_pred             ccC-CCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc--C----------
Q psy2648         194 EFT-PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR--G----------  260 (708)
Q Consensus       194 ~~~-~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~--~----------  260 (708)
                      .+. +........+|..|.|||++.|.......+||||+|||++||++++.-|.+.+..+...+|.+  |          
T Consensus       169 a~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v  248 (323)
T KOG0594|consen  169 AFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGV  248 (323)
T ss_pred             HhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCc
Confidence            776 444466678999999999999985556889999999999999999999999887666666642  1          


Q ss_pred             ------CCCCCC------------CCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         261 ------KYRIPF------------YMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       261 ------~~~~p~------------~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                            +..+|.            ..+++..+|+.+||++||.+|.|++.++
T Consensus       249 ~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al  300 (323)
T KOG0594|consen  249 SSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGAL  300 (323)
T ss_pred             cccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHh
Confidence                  111111            1235889999999999999999998766


No 105
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00  E-value=1.3e-42  Score=365.61  Aligned_cols=246  Identities=29%  Similarity=0.429  Sum_probs=204.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC---CCCCeeeEEEEEEe-----CC
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML---DHPNIVKLFQVIET-----EK  118 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~~-----~~  118 (708)
                      +|++.+.||+|+||.||+|+++.+++.||||++............+.+|+++++.+   +||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            59999999999999999999999999999999976543333334466788777665   79999999999864     34


Q ss_pred             EEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC
Q psy2648         119 TLYLVMEYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT  196 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~  196 (708)
                      .+++||||+.+ +|.+++...  ..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~  159 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYS  159 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence            68999999985 898888764  348999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-----------CC--
Q psy2648         197 PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK-----------YR--  263 (708)
Q Consensus       197 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~-----------~~--  263 (708)
                      .........|++.|+|||++.+..++ .++|||||||++|+|++|..||.+.+..+...++....           ..  
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07863         160 CQMALTPVVVTLWYRAPEVLLQSTYA-TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP  238 (288)
T ss_pred             CcccCCCccccccccCchHhhCCCCC-CcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence            44444556789999999999887764 78999999999999999999998876665554443210           00  


Q ss_pred             --------------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         264 --------------IPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       264 --------------~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                    ....++.++.+||.+||++||++|||++++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l  283 (288)
T cd07863         239 RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRAL  283 (288)
T ss_pred             ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHh
Confidence                          0113567889999999999999999999876


No 106
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00  E-value=1.4e-42  Score=378.00  Aligned_cols=251  Identities=27%  Similarity=0.478  Sum_probs=209.4

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC------
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE------  117 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------  117 (708)
                      .+++|++.+.||+|+||.||+|.+..+++.||||++.+........+.+.+|+.+++.++||||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            46799999999999999999999999999999999976654555567788999999999999999999998654      


Q ss_pred             CEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC
Q psy2648         118 KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP  197 (708)
Q Consensus       118 ~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~  197 (708)
                      ..+|+||||+.+ +|.+++.  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~  171 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  171 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence            357999999975 6777664  3588999999999999999999999999999999999999999999999999986654


Q ss_pred             CCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-----------------
Q psy2648         198 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-----------------  260 (708)
Q Consensus       198 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-----------------  260 (708)
                      .......+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.+..+....+...                 
T Consensus       172 ~~~~~~~~~t~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (355)
T cd07874         172 SFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR  250 (355)
T ss_pred             ccccCCccccCCccCHHHHcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHH
Confidence            4445567899999999999988875 7899999999999999999999887644332222110                 


Q ss_pred             -----C-----CC---------------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         261 -----K-----YR---------------IPFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       261 -----~-----~~---------------~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                           .     ..               .+...+.++.+||.+||..||++|||+++++   |+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~  316 (355)
T cd07874         251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINV  316 (355)
T ss_pred             HHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhc
Confidence                 0     00               0112356789999999999999999999988   6653


No 107
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00  E-value=2.5e-42  Score=377.37  Aligned_cols=251  Identities=27%  Similarity=0.480  Sum_probs=211.2

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC------
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE------  117 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------  117 (708)
                      ..++|++.+.||+|+||.||+|.+..+++.||||++.+........+.+.+|+.+++.++||||+++++++...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            46799999999999999999999999999999999986554445566788999999999999999999987643      


Q ss_pred             CEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC
Q psy2648         118 KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP  197 (708)
Q Consensus       118 ~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~  197 (708)
                      ..+|+||||+.+ +|.+++.  ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~  178 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  178 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHH--hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence            358999999975 6777764  3588999999999999999999999999999999999999999999999999986654


Q ss_pred             CCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC----------------
Q psy2648         198 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK----------------  261 (708)
Q Consensus       198 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~----------------  261 (708)
                      ........||+.|+|||++.+..++ .++|||||||+||+|++|+.||.+.+..+...++....                
T Consensus       179 ~~~~~~~~~t~~y~aPE~~~~~~~~-~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (364)
T cd07875         179 SFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR  257 (364)
T ss_pred             CCcccCCcccCCcCCHHHHhCCCCC-chhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHH
Confidence            4444567899999999999988875 78999999999999999999999877665554443210                


Q ss_pred             ------CC--------------CC------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         262 ------YR--------------IP------FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       262 ------~~--------------~p------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                            ..              .|      ...+.++.+||.+||+.||.+|||+++++   |+..
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             HHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                  00              00      11246789999999999999999999988   7653


No 108
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00  E-value=2.3e-42  Score=368.64  Aligned_cols=251  Identities=31%  Similarity=0.507  Sum_probs=210.1

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      +.+|++.+.||+|+||.||+|++..+++.||||+++..... .....+.+|+++++.++||||+++++++..++.+|+||
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   83 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF   83 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence            56899999999999999999999999999999999755322 22345678999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCcc
Q psy2648         125 EYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLD  202 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~  202 (708)
                      ||+++ +|.+++...+ .+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... ....
T Consensus        84 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  162 (309)
T cd07872          84 EYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYS  162 (309)
T ss_pred             eCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccc
Confidence            99985 8888887654 5899999999999999999999999999999999999999999999999998754322 2233


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-------------------CCC
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-------------------KYR  263 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-------------------~~~  263 (708)
                      ...+++.|+|||++.+....+.++|||||||++|+|++|+.||.+.+..+....+.+.                   .+.
T Consensus       163 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (309)
T cd07872         163 NEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYN  242 (309)
T ss_pred             cccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhh
Confidence            4578999999999876543357999999999999999999999987765544443221                   011


Q ss_pred             CC-----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhh
Q psy2648         264 IP-----------FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       264 ~p-----------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                      .|           ..+++++.+||.+||..||.+|||+++++   |+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~  290 (309)
T cd07872         243 FPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFR  290 (309)
T ss_pred             cCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhh
Confidence            11           13678999999999999999999999987   765


No 109
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00  E-value=1.1e-42  Score=375.54  Aligned_cols=249  Identities=30%  Similarity=0.531  Sum_probs=212.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ++|++.+.||+|+||.||++++..+++.||+|++.+... .......+.+|+.++..++||||+++++++++...+|+||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            379999999999999999999999999999999975432 2223345778999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC--c
Q psy2648         125 EYASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--L  201 (708)
Q Consensus       125 Ey~~gg~L~~~i~~-~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~--~  201 (708)
                      ||+++|+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........  .
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~  160 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS  160 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCccee
Confidence            99999999999977 46799999999999999999999999999999999999999999999999999876533222  2


Q ss_pred             cccccCCcccccccccC----CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC--CCCC---CCCHHH
Q psy2648         202 DTFCGSPPYAAPELFQG----KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY--RIPF---YMSTDC  272 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~----~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~--~~p~---~~s~~~  272 (708)
                      ...+||+.|+|||++.+    ....+.++|||||||+||+|++|+.||.+.+..+...++.....  .+|.   .+++++
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~  240 (332)
T cd05623         161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDA  240 (332)
T ss_pred             cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHH
Confidence            34689999999999863    22225789999999999999999999999998888888876543  3333   568999


Q ss_pred             HHHHHHhhhhCCCC--CCCHHHHh
Q psy2648         273 ENLLKKFLVLNPAK--RASLEVSG  294 (708)
Q Consensus       273 ~~Li~~~L~~dP~~--Rps~~~~~  294 (708)
                      .+||++||..++.+  |+++++++
T Consensus       241 ~~li~~ll~~~~~r~~r~~~~~~~  264 (332)
T cd05623         241 KDLIRRLICSREHRLGQNGIEDFK  264 (332)
T ss_pred             HHHHHHHccChhhhcCCCCHHHHh
Confidence            99999999765554  68888877


No 110
>KOG0612|consensus
Probab=100.00  E-value=2e-44  Score=412.49  Aligned_cols=249  Identities=32%  Similarity=0.520  Sum_probs=222.3

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      .++|.|++.||+|+||.|.+++++.|++.||+|+++|-.+- ..+..-|..|-.||..-+.+.||+|+..|++++++|+|
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV  153 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV  153 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence            45899999999999999999999999999999999875432 23334577899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC--c
Q psy2648         124 MEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--L  201 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~--~  201 (708)
                      |||++||||...+.+.++++|+.|++|..+|+.||.-||+.|+|||||||+|||||..|+|||+|||.+-.+..+..  .
T Consensus       154 MdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s  233 (1317)
T KOG0612|consen  154 MDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRS  233 (1317)
T ss_pred             EecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEe
Confidence            99999999999999989999999999999999999999999999999999999999999999999998866653332  3


Q ss_pred             cccccCCcccccccccCC----ccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC--CCCCC--CCCCHHHH
Q psy2648         202 DTFCGSPPYAAPELFQGK----KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG--KYRIP--FYMSTDCE  273 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~----~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~--~~~~p--~~~s~~~~  273 (708)
                      ...+|||-|++||+++..    ...|+.+||||+||++|||+.|..||...+.-+.+.+|..-  .+.+|  ..+|++++
T Consensus       234 ~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeak  313 (1317)
T KOG0612|consen  234 SVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAK  313 (1317)
T ss_pred             ccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHH
Confidence            457899999999999632    23478999999999999999999999999999999999877  56677  56899999


Q ss_pred             HHHHHhhhhCCCCCCC---HHHHh
Q psy2648         274 NLLKKFLVLNPAKRAS---LEVSG  294 (708)
Q Consensus       274 ~Li~~~L~~dP~~Rps---~~~~~  294 (708)
                      +||.++|. +|+.|.+   ++++.
T Consensus       314 dLI~~ll~-~~e~RLgrngiedik  336 (1317)
T KOG0612|consen  314 DLIEALLC-DREVRLGRNGIEDIK  336 (1317)
T ss_pred             HHHHHHhc-ChhhhcccccHHHHH
Confidence            99999988 7888888   88877


No 111
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00  E-value=4.9e-42  Score=355.62  Aligned_cols=248  Identities=31%  Similarity=0.524  Sum_probs=216.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCCh---hhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP---GSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYL  122 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~yl  122 (708)
                      ++|++.+.||+|+||.||+|.+..+++.||||.+.......   ...+.+.+|+++++.++||||++++++++.+..+|+
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            46999999999999999999999999999999987654322   234567899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC--
Q psy2648         123 VMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--  200 (708)
Q Consensus       123 VmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~--  200 (708)
                      ||||+++++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++........  
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~  161 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG  161 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence            999999999999998888899999999999999999999999999999999999999999999999999875432211  


Q ss_pred             --ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHH
Q psy2648         201 --LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG--KYRIPFYMSTDCENLL  276 (708)
Q Consensus       201 --~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~--~~~~p~~~s~~~~~Li  276 (708)
                        ....+|++.|+|||++.+..+ +.++|||||||++|+|++|+.||...+..+....+...  ...+|...+.++.++|
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  240 (263)
T cd06625         162 TGMKSVTGTPYWMSPEVISGEGY-GRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFL  240 (263)
T ss_pred             ccccCCCcCccccCcceeccCCC-CchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHH
Confidence              134578899999999988776 48999999999999999999999887665555454443  3446777899999999


Q ss_pred             HHhhhhCCCCCCCHHHHh
Q psy2648         277 KKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       277 ~~~L~~dP~~Rps~~~~~  294 (708)
                      .+||..||.+||++.++.
T Consensus       241 ~~~l~~~p~~Rpt~~~ll  258 (263)
T cd06625         241 RRTFVENAKKRPSAEELL  258 (263)
T ss_pred             HHHhhcCcccCCCHHHHh
Confidence            999999999999999876


No 112
>KOG0614|consensus
Probab=100.00  E-value=9.3e-45  Score=385.28  Aligned_cols=257  Identities=33%  Similarity=0.574  Sum_probs=238.2

Q ss_pred             CCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC
Q psy2648          40 RDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK  118 (708)
Q Consensus        40 ~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~  118 (708)
                      -....+.+.+++.+||-|+||.|-+++.......+|+|+++|... +.++.+.++.|-+||...+.|+||+||..|.+++
T Consensus       414 ~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~k  493 (732)
T KOG0614|consen  414 FAQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSK  493 (732)
T ss_pred             hcccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccch
Confidence            344557789999999999999999999876666799999998765 4556678999999999999999999999999999


Q ss_pred             EEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC
Q psy2648         119 TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG  198 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~  198 (708)
                      ++|+.||-|-||+|...++.++.|++..+++|...+++|++|||++|||+|||||||+|||.+|.+||.|||+++.+..+
T Consensus       494 yvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g  573 (732)
T KOG0614|consen  494 YVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG  573 (732)
T ss_pred             hhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHH
Q psy2648         199 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG--KYRIPFYMSTDCENLL  276 (708)
Q Consensus       199 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~--~~~~p~~~s~~~~~Li  276 (708)
                      .++.++||||.|.|||++..+..+ .++|.||||+++|||++|.+||.+.++...++.|++|  .+.+|..++..+.+||
T Consensus       574 ~KTwTFcGTpEYVAPEIILnKGHD-~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Li  652 (732)
T KOG0614|consen  574 RKTWTFCGTPEYVAPEIILNKGHD-RAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLI  652 (732)
T ss_pred             CceeeecCCcccccchhhhccCcc-hhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHH
Confidence            999999999999999999988876 7999999999999999999999999999999999998  4678999999999999


Q ss_pred             HHhhhhCCCCCCC-----HHHHh---hhh
Q psy2648         277 KKFLVLNPAKRAS-----LEVSG---EVT  297 (708)
Q Consensus       277 ~~~L~~dP~~Rps-----~~~~~---~~~  297 (708)
                      +++...+|.+|..     +.+|.   |+.
T Consensus       653 k~LCr~~P~ERLG~~~~gI~DIkkH~Wf~  681 (732)
T KOG0614|consen  653 KKLCRDNPTERLGYQKGGINDIKKHRWFE  681 (732)
T ss_pred             HHHHhcCcHhhhccccCChHHHHhhhhhh
Confidence            9999999999987     45665   764


No 113
>PHA02988 hypothetical protein; Provisional
Probab=100.00  E-value=3.2e-42  Score=363.86  Aligned_cols=239  Identities=17%  Similarity=0.256  Sum_probs=208.8

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCCCh-hhHHHHHHHHHHHHhCCCCCeeeEEEEEEe----CCEEEEEEec
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP-GSLQKLFREVRIMKMLDHPNIVKLFQVIET----EKTLYLVMEY  126 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----~~~~ylVmEy  126 (708)
                      ..||+|+++.||+|.+  +|+.||||++.+..... ...+.+.+|+++|++++|||||++++++.+    ...+++||||
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey  103 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY  103 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence            5789999999999987  78999999998654432 234667899999999999999999999876    3578999999


Q ss_pred             cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccccc
Q psy2648         127 ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFC  205 (708)
Q Consensus       127 ~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~-~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~~  205 (708)
                      +++|+|.+++.....+++.....++.|++.||.|||+ .+++||||||+|||+++++.+||+|||+++.....  .....
T Consensus       104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~--~~~~~  181 (283)
T PHA02988        104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP--PFKNV  181 (283)
T ss_pred             CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc--ccccc
Confidence            9999999999888889999999999999999999998 49999999999999999999999999998765332  23457


Q ss_pred             cCCcccccccccC--CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHhhh
Q psy2648         206 GSPPYAAPELFQG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK--YRIPFYMSTDCENLLKKFLV  281 (708)
Q Consensus       206 Gt~~Y~APE~l~~--~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~--~~~p~~~s~~~~~Li~~~L~  281 (708)
                      |++.|+|||++.+  ..+ +.++|||||||++|+|++|..||.+.+..++...+..+.  +.+|...++++.+||.+||+
T Consensus       182 ~~~~y~aPE~~~~~~~~~-~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~  260 (283)
T PHA02988        182 NFMVYFSYKMLNDIFSEY-TIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTS  260 (283)
T ss_pred             CcccccCHHHhhhccccc-cchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhc
Confidence            8999999999976  455 479999999999999999999999999888888886553  44555688999999999999


Q ss_pred             hCCCCCCCHHHHhh
Q psy2648         282 LNPAKRASLEVSGE  295 (708)
Q Consensus       282 ~dP~~Rps~~~~~~  295 (708)
                      .||++|||++++..
T Consensus       261 ~dp~~Rps~~ell~  274 (283)
T PHA02988        261 HDSIKRPNIKEILY  274 (283)
T ss_pred             CCcccCcCHHHHHH
Confidence            99999999998874


No 114
>KOG0201|consensus
Probab=100.00  E-value=1.6e-44  Score=380.51  Aligned_cols=246  Identities=31%  Similarity=0.497  Sum_probs=218.1

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      .|..++.||+|+||.||+|.+..|++.||||+++-... ..+.+.+.+|+.+|.++++|||.++|+.|.....+||+|||
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~-~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA-EDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhc-chhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            58888999999999999999999999999999986653 34566788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccccc
Q psy2648         127 ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFC  205 (708)
Q Consensus       127 ~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~~~  205 (708)
                      |.||++.+.+...+.+.|.++..++++++.||.|||.++.+|||||+.|||+..+|.+||+|||++.+..... ...++.
T Consensus        93 ~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfv  172 (467)
T KOG0201|consen   93 CGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFV  172 (467)
T ss_pred             hcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcccccc
Confidence            9999999999877777999999999999999999999999999999999999999999999999998765433 337899


Q ss_pred             cCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHhhhhCC
Q psy2648         206 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCENLLKKFLVLNP  284 (708)
Q Consensus       206 Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~-~~p~~~s~~~~~Li~~~L~~dP  284 (708)
                      |||.|||||++++..|+ .++||||||++.|||++|.+||....+..+...|-+..+ .+....|+.+++||..||.+||
T Consensus       173 GTPfwMAPEVI~~~~Y~-~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P  251 (467)
T KOG0201|consen  173 GTPFWMAPEVIKQSGYD-TKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNP  251 (467)
T ss_pred             ccccccchhhhcccccc-chhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhcCc
Confidence            99999999999988886 799999999999999999999988776544433433322 2334678899999999999999


Q ss_pred             CCCCCHHHHh
Q psy2648         285 AKRASLEVSG  294 (708)
Q Consensus       285 ~~Rps~~~~~  294 (708)
                      +.||++.+++
T Consensus       252 ~~RpsA~~LL  261 (467)
T KOG0201|consen  252 EFRPSAKELL  261 (467)
T ss_pred             ccCcCHHHHh
Confidence            9999998776


No 115
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00  E-value=5.3e-42  Score=362.32  Aligned_cols=246  Identities=38%  Similarity=0.707  Sum_probs=223.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      .+|++.+.||+|+||.||++.+..+++.||||++.+... .....+.+.+|+++|+.++||||+++++++.....+|+||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            369999999999999999999999999999999976543 2344567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF  204 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~  204 (708)
                      ||+++++|.+++...+.+++..+..++.||+.||+|||++||+||||+|.|||++.++.+||+|||++......  ....
T Consensus        81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~--~~~~  158 (290)
T cd05580          81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR--TYTL  158 (290)
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC--CCCC
Confidence            99999999999998889999999999999999999999999999999999999999999999999998765433  3456


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCC
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNP  284 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP  284 (708)
                      +|++.|+|||.+.+..+ +.++||||||+++|+|++|..||...+..++.+.+..+...+|...+.++.++|++||..||
T Consensus       159 ~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  237 (290)
T cd05580         159 CGTPEYLAPEIILSKGY-GKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQVDL  237 (290)
T ss_pred             CCCccccChhhhcCCCC-CccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHHccCCH
Confidence            89999999999987765 47899999999999999999999988888888888888888898899999999999999999


Q ss_pred             CCCC-----CHHHHh
Q psy2648         285 AKRA-----SLEVSG  294 (708)
Q Consensus       285 ~~Rp-----s~~~~~  294 (708)
                      .+|+     +++++.
T Consensus       238 ~~R~~~~~~~~~~l~  252 (290)
T cd05580         238 TKRLGNLKNGVNDIK  252 (290)
T ss_pred             HHccCcccCCHHHHH
Confidence            9999     777766


No 116
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00  E-value=2.9e-42  Score=362.37  Aligned_cols=238  Identities=28%  Similarity=0.466  Sum_probs=203.2

Q ss_pred             EcccCceEEEEEEEcCCCcEEEEEEeccCCCCh-hhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCCh
Q psy2648          54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP-GSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEV  132 (708)
Q Consensus        54 LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg~L  132 (708)
                      ||+|+||.||++++..+|+.||+|++.+..... .....+..|+++|++++||||+++++++++...+|+||||++|++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            699999999999999999999999997644322 2233456799999999999999999999999999999999999999


Q ss_pred             HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccccccCCcc
Q psy2648         133 FDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPY  210 (708)
Q Consensus       133 ~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~~Gt~~Y  210 (708)
                      .+++...+  .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.............|++.|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y  160 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGY  160 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCc
Confidence            98886554  4888999999999999999999999999999999999999999999999998766544444456799999


Q ss_pred             cccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHcCCCCCC-CCCCHHHHHHHHHhhhhCCC
Q psy2648         211 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST----LRELRERVLRGKYRIP-FYMSTDCENLLKKFLVLNPA  285 (708)
Q Consensus       211 ~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~----~~~l~~~i~~~~~~~p-~~~s~~~~~Li~~~L~~dP~  285 (708)
                      +|||++.+..++ .++|||||||++|+|++|..||.+..    ..++...+.......+ ...++++.+||++||++||.
T Consensus       161 ~aPE~~~~~~~~-~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~  239 (277)
T cd05607         161 MAPEILKEEPYS-YPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPE  239 (277)
T ss_pred             cCHHHHccCCCC-CchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHh
Confidence            999999888764 78999999999999999999997643    3345555555544433 35789999999999999999


Q ss_pred             CCCCHHH
Q psy2648         286 KRASLEV  292 (708)
Q Consensus       286 ~Rps~~~  292 (708)
                      +||++.+
T Consensus       240 ~R~~~~~  246 (277)
T cd05607         240 DRLGSRE  246 (277)
T ss_pred             hCCCCcc
Confidence            9999854


No 117
>KOG0695|consensus
Probab=100.00  E-value=3.7e-43  Score=356.86  Aligned_cols=248  Identities=34%  Similarity=0.622  Sum_probs=226.1

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCE
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKT  119 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~  119 (708)
                      ..-+.+|.++++||+|+|++|.+++++.|.+.||+|+++|...+ .++..-+..|-.+..+. +||++|-|+.+|+++..
T Consensus       246 ~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesr  325 (593)
T KOG0695|consen  246 GLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESR  325 (593)
T ss_pred             ccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccce
Confidence            44567899999999999999999999999999999999988665 34555667787777665 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcccc-CCC
Q psy2648         120 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPG  198 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~-~~~  198 (708)
                      +++|.||++||+|..+++++.+++|+.|+.|..+|+.||.|||++|||+||||.+|+|||..|+|||+|+|+++.- .++
T Consensus       326 lffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~g  405 (593)
T KOG0695|consen  326 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG  405 (593)
T ss_pred             EEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999874 567


Q ss_pred             CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCC-------C-CHHHHHHHHHcCCCCCCCCCCH
Q psy2648         199 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-------S-TLRELRERVLRGKYRIPFYMST  270 (708)
Q Consensus       199 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~-------~-~~~~l~~~i~~~~~~~p~~~s~  270 (708)
                      ..+.++||||.|+|||++.|..| +..+|||+|||++|||+.|+.||+-       . +..-+.+-|+...+++|..+|.
T Consensus       406 d~tstfcgtpnyiapeilrgeey-gfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprslsv  484 (593)
T KOG0695|consen  406 DTTSTFCGTPNYIAPEILRGEEY-GFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSV  484 (593)
T ss_pred             cccccccCCCcccchhhhccccc-CceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceeeh
Confidence            78889999999999999999998 6899999999999999999999962       2 2344778889999999999999


Q ss_pred             HHHHHHHHhhhhCCCCCCCH
Q psy2648         271 DCENLLKKFLVLNPAKRASL  290 (708)
Q Consensus       271 ~~~~Li~~~L~~dP~~Rps~  290 (708)
                      .+..+++..|.+||.+|...
T Consensus       485 kas~vlkgflnkdp~erlgc  504 (593)
T KOG0695|consen  485 KASHVLKGFLNKDPKERLGC  504 (593)
T ss_pred             hhHHHHHHhhcCCcHHhcCC
Confidence            99999999999999999764


No 118
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00  E-value=9.7e-43  Score=359.56  Aligned_cols=246  Identities=40%  Similarity=0.711  Sum_probs=211.8

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYA  127 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~  127 (708)
                      |++++.||+|+||.||+|++..+++.||+|++..............+|+.+++.++||||+++++++.....+|+||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            89999999999999999999999999999999877544444445567999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcccc-CCCCCcccccc
Q psy2648         128 SGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCG  206 (708)
Q Consensus       128 ~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~-~~~~~~~~~~G  206 (708)
                      .+++|.+++...+.+++.++..++.||+.||+|||+++|+||||||+|||++.++.++|+|||++... .........++
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~  160 (260)
T PF00069_consen   81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVG  160 (260)
T ss_dssp             TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999998889999999999999999999999999999999999999999999999999998753 23344566789


Q ss_pred             CCccccccccc-CCccCCCchhHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHcCCCCCCC----CCCHHHHHHHHH
Q psy2648         207 SPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFDGST---LRELRERVLRGKYRIPF----YMSTDCENLLKK  278 (708)
Q Consensus       207 t~~Y~APE~l~-~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~---~~~l~~~i~~~~~~~p~----~~s~~~~~Li~~  278 (708)
                      ++.|+|||++. +..+ +.++||||||+++|+|++|..||...+   ......+........+.    ..++++.+||.+
T Consensus       161 ~~~y~aPE~~~~~~~~-~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  239 (260)
T PF00069_consen  161 TPEYMAPEVLQQGKKY-TRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKK  239 (260)
T ss_dssp             SGGGSCHHHHTTTSSB-STHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHH
T ss_pred             cccccccccccccccc-cccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHH
Confidence            99999999998 5554 589999999999999999999999873   33333333332222111    224899999999


Q ss_pred             hhhhCCCCCCCHHHHh
Q psy2648         279 FLVLNPAKRASLEVSG  294 (708)
Q Consensus       279 ~L~~dP~~Rps~~~~~  294 (708)
                      ||..||++||+++++.
T Consensus       240 ~l~~~p~~R~~~~~l~  255 (260)
T PF00069_consen  240 MLSKDPEQRPSAEELL  255 (260)
T ss_dssp             HSSSSGGGSTTHHHHH
T ss_pred             HccCChhHCcCHHHHh
Confidence            9999999999999876


No 119
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=100.00  E-value=4.1e-42  Score=362.90  Aligned_cols=247  Identities=28%  Similarity=0.444  Sum_probs=210.1

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCCh-hhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP-GSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      .|++.+.||+|+||.||+|.+..+++.||||.+.+..... .....+.+|+.+++.++|+||+.+++.+.+.+.+|+|||
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence            4889999999999999999999999999999987654332 233457789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccc
Q psy2648         126 YASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT  203 (708)
Q Consensus       126 y~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~  203 (708)
                      |+++++|.+++...+  .+++.++..++.|++.||.|||+++|+||||||+|||++.++.++|+|||++...........
T Consensus        81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  160 (285)
T cd05630          81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG  160 (285)
T ss_pred             ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence            999999999886543  589999999999999999999999999999999999999999999999999876554444455


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHH-HcCCCCCCCCCCHHHHHHHHHh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLR---ELRERV-LRGKYRIPFYMSTDCENLLKKF  279 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~---~l~~~i-~~~~~~~p~~~s~~~~~Li~~~  279 (708)
                      .+|++.|+|||++.+..++ .++|||||||++|+|++|..||......   +....+ ......++...++++.+||.+|
T Consensus       161 ~~g~~~y~aPE~~~~~~~~-~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  239 (285)
T cd05630         161 RVGTVGYMAPEVVKNERYT-FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKML  239 (285)
T ss_pred             CCCCccccChHHHcCCCCC-CccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHH
Confidence            6899999999999888775 7899999999999999999999865321   112222 2222345667889999999999


Q ss_pred             hhhCCCCCCC-----HHHHh
Q psy2648         280 LVLNPAKRAS-----LEVSG  294 (708)
Q Consensus       280 L~~dP~~Rps-----~~~~~  294 (708)
                      |+.||.+|||     +++++
T Consensus       240 l~~~p~~R~s~~~~~~~~~~  259 (285)
T cd05630         240 LCKDPKERLGCQGGGAREVK  259 (285)
T ss_pred             hhcCHHHccCCCCCchHHHH
Confidence            9999999999     66666


No 120
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00  E-value=6.4e-42  Score=361.22  Aligned_cols=243  Identities=26%  Similarity=0.452  Sum_probs=211.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCCh-hhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP-GSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      .|++.+.||+|+||+||+|.+..+++.||+|++.+..... .....+.+|+++|+.++|+||+.+++.+..++.+|+|||
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence            4888999999999999999999999999999997654432 233456789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccc
Q psy2648         126 YASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT  203 (708)
Q Consensus       126 y~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~  203 (708)
                      |+.+++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||+++++.+||+|||++...........
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (285)
T cd05632          81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG  160 (285)
T ss_pred             eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence            99999999888654  3699999999999999999999999999999999999999999999999999876544444455


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHH----HHHHHHcCCCCCCCCCCHHHHHHHHHh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRE----LRERVLRGKYRIPFYMSTDCENLLKKF  279 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~----l~~~i~~~~~~~p~~~s~~~~~Li~~~  279 (708)
                      ..|++.|+|||++.+..++ .++|||||||++|+|++|..||.+.....    +..++......++...++++.+||.+|
T Consensus       161 ~~g~~~~~aPE~~~~~~~~-~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  239 (285)
T cd05632         161 RVGTVGYMAPEVLNNQRYT-LSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKML  239 (285)
T ss_pred             CCCCcCccChHHhcCCCCC-cccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHH
Confidence            6899999999999887775 78999999999999999999998766543    344445555556667889999999999


Q ss_pred             hhhCCCCCCCH
Q psy2648         280 LVLNPAKRASL  290 (708)
Q Consensus       280 L~~dP~~Rps~  290 (708)
                      |+.||++||+.
T Consensus       240 l~~~P~~R~~~  250 (285)
T cd05632         240 LTKDPKQRLGC  250 (285)
T ss_pred             ccCCHhHcCCC
Confidence            99999999994


No 121
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00  E-value=8.2e-42  Score=353.01  Aligned_cols=246  Identities=30%  Similarity=0.581  Sum_probs=218.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++.+.||+|+||.||++++..+++.||+|.++.... ....+.+.+|+.+++.++||||+++++.+++++.+|+||||
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   79 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY   79 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence            58999999999999999999999999999999875432 33456788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccc
Q psy2648         127 ASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDT  203 (708)
Q Consensus       127 ~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~  203 (708)
                      +++++|.+++...  ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++....... ....
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~  159 (255)
T cd08219          80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT  159 (255)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence            9999999988653  358999999999999999999999999999999999999999999999999987654322 2334


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHhhhh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR-IPFYMSTDCENLLKKFLVL  282 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~-~p~~~s~~~~~Li~~~L~~  282 (708)
                      ..|++.|+|||++.+..+ ++++|+||||+++|+|++|..||...+.......+..+.+. +|...+.++.+||.+||+.
T Consensus       160 ~~~~~~~~aPE~~~~~~~-~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  238 (255)
T cd08219         160 YVGTPYYVPPEIWENMPY-NNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFKR  238 (255)
T ss_pred             ccCCccccCHHHHccCCc-CchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHHhC
Confidence            678999999999988776 47899999999999999999999998888888888777654 5677889999999999999


Q ss_pred             CCCCCCCHHHHh
Q psy2648         283 NPAKRASLEVSG  294 (708)
Q Consensus       283 dP~~Rps~~~~~  294 (708)
                      ||++||+++++.
T Consensus       239 ~P~~Rp~~~~il  250 (255)
T cd08219         239 NPRSRPSATTIL  250 (255)
T ss_pred             CcccCCCHHHHh
Confidence            999999999865


No 122
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00  E-value=6.8e-42  Score=356.92  Aligned_cols=249  Identities=22%  Similarity=0.317  Sum_probs=213.7

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEc---CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHV---PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~---~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~y  121 (708)
                      ..+|++.+.||+|+||.||+|.+.   ..+..||+|+++... .......+.+|+.+|++++||||+++++++...+.+|
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   82 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM   82 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence            347999999999999999999875   456789999987543 2334456889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q psy2648         122 LVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK  200 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~  200 (708)
                      |||||+++|+|.+++... +.+++.+++.++.||+.||+|||++|++||||||+|||++.++.+||+|||++........
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~  162 (266)
T cd05064          83 IVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI  162 (266)
T ss_pred             EEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccch
Confidence            999999999999999875 5789999999999999999999999999999999999999999999999998765322211


Q ss_pred             c--cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHH
Q psy2648         201 L--DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLL  276 (708)
Q Consensus       201 ~--~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li  276 (708)
                      .  ....+++.|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..++.+.+..+. .+.|...+..+.+++
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  241 (266)
T cd05064         163 YTTMSGKSPVLWAAPEAIQYHHFS-SASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLM  241 (266)
T ss_pred             hcccCCCCceeecCHHHHhhCCcc-chhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Confidence            1  123456789999999887774 79999999999999775 999999988888888887663 345667889999999


Q ss_pred             HHhhhhCCCCCCCHHHHhh
Q psy2648         277 KKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       277 ~~~L~~dP~~Rps~~~~~~  295 (708)
                      .+||..||.+||+++++..
T Consensus       242 ~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         242 LDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHHcCCCchhCCCHHHHHH
Confidence            9999999999999998763


No 123
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00  E-value=1.3e-41  Score=350.80  Aligned_cols=247  Identities=30%  Similarity=0.516  Sum_probs=221.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      .|.+.+.||+|+||.||+|.+..+++.||+|.+............+.+|+++++.++||||+++++++...+.+|+||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            48899999999999999999999999999999987665666677888999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccc
Q psy2648         127 ASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDT  203 (708)
Q Consensus       127 ~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~  203 (708)
                      +++++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++...... ....
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~  160 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT  160 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence            9999999999775  568999999999999999999999999999999999999999999999999987654432 2345


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHhhhh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR-IPFYMSTDCENLLKKFLVL  282 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~-~p~~~s~~~~~Li~~~L~~  282 (708)
                      .+|++.|+|||++.+..++ .++|||||||++|+|++|+.||...+..++..++..+.+. ++...+.++.++|.+||+.
T Consensus       161 ~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  239 (256)
T cd08529         161 IVGTPYYLSPELCEDKPYN-EKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTK  239 (256)
T ss_pred             cccCccccCHHHhcCCCCC-CccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHccC
Confidence            6789999999999887764 7899999999999999999999998888888888777653 4556789999999999999


Q ss_pred             CCCCCCCHHHHh
Q psy2648         283 NPAKRASLEVSG  294 (708)
Q Consensus       283 dP~~Rps~~~~~  294 (708)
                      ||++||++.++.
T Consensus       240 ~p~~Rp~~~~ll  251 (256)
T cd08529         240 DYRQRPDTFQLL  251 (256)
T ss_pred             CcccCcCHHHHh
Confidence            999999999876


No 124
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00  E-value=8.8e-42  Score=363.06  Aligned_cols=248  Identities=25%  Similarity=0.377  Sum_probs=206.0

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcC----------------CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCee
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVP----------------TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV  108 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~----------------tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv  108 (708)
                      -++|++.+.||+|+||.||+|.+..                ++..||||++.... .......+.+|+++|+.++||||+
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv   82 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNII   82 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCee
Confidence            4689999999999999999998643                34579999987543 334456788999999999999999


Q ss_pred             eEEEEEEeCCEEEEEEeccCCCChHHHHHHcC-------------------CCCHHHHHHHHHHHHHHHHHHHHCCceec
Q psy2648         109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-------------------RMKEKEARAKFRQIVSAVQYCHQKKIIHR  169 (708)
Q Consensus       109 ~l~~~~~~~~~~ylVmEy~~gg~L~~~i~~~~-------------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHR  169 (708)
                      ++++++.+.+.+|+||||+++|+|.+++....                   .+++.++..++.||+.||.|||++||+||
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~  162 (304)
T cd05096          83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHR  162 (304)
T ss_pred             EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            99999999999999999999999999986532                   35677889999999999999999999999


Q ss_pred             CCCCCCEEEcCCCcEEEEeccCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc--CCCC
Q psy2648         170 DLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS--GSLP  244 (708)
Q Consensus       170 DLKPeNILld~~~~iKL~DFGls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt--G~~P  244 (708)
                      ||||+|||++.++.+||+|||+++.......   .....+++.|+|||++.+..++ .++|||||||++|+|++  +..|
T Consensus       163 dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~~~~~~~p  241 (304)
T cd05096         163 DLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFT-TASDVWAFGVTLWEILMLCKEQP  241 (304)
T ss_pred             CcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCC-chhhhHHHHHHHHHHHHccCCCC
Confidence            9999999999999999999999976543321   2234567889999999877764 79999999999999986  6789


Q ss_pred             CCCCCHHHHHHHHHc----C----CCCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         245 FDGSTLRELRERVLR----G----KYRIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       245 f~~~~~~~l~~~i~~----~----~~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      |.+.+..++...+..    .    ....|...+.++.+||.+||..||.+|||++++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         242 YGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             CCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence            988776665544421    1    1123456788999999999999999999999886


No 125
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00  E-value=6.4e-42  Score=359.28  Aligned_cols=248  Identities=26%  Similarity=0.437  Sum_probs=216.7

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCC-----cEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTG-----KEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT  119 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg-----~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  119 (708)
                      +.+|++.+.||+|+||.||+|.+...+     ..||+|.+.... .......+.+|+++|+.++||||+++++++.....
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~   82 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP   82 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence            457999999999999999999986655     789999986443 33445668899999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCc
Q psy2648         120 LYLVMEYASGGEVFDYLVLH----------------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN  183 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~----------------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~  183 (708)
                      .|++|||+++++|.+++...                ..+++.++..++.||+.||.|||++||+||||||+|||+++++.
T Consensus        83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~  162 (283)
T cd05048          83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLT  162 (283)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCc
Confidence            99999999999999999765                45788899999999999999999999999999999999999999


Q ss_pred             EEEEeccCccccCCCC---CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHc
Q psy2648         184 IKIADFGFSNEFTPGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLR  259 (708)
Q Consensus       184 iKL~DFGls~~~~~~~---~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~  259 (708)
                      +||+|||++.......   ......+++.|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..++...+..
T Consensus       163 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~  241 (283)
T cd05048         163 VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFT-TESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRS  241 (283)
T ss_pred             EEECCCcceeeccccccccccCCCcccccccCHHHhccCcCc-hhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            9999999987543322   12345678899999999877764 79999999999999998 9999999999999888877


Q ss_pred             CCC-CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         260 GKY-RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       260 ~~~-~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +.. ..|...++++.+|+.+||+.||.+||+++++.
T Consensus       242 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~  277 (283)
T cd05048         242 RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIH  277 (283)
T ss_pred             CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            654 45677899999999999999999999999886


No 126
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00  E-value=2e-41  Score=349.79  Aligned_cols=247  Identities=31%  Similarity=0.552  Sum_probs=217.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEe-CCEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIET-EKTLYLVME  125 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~~ylVmE  125 (708)
                      +|++++.||+|+||.||++.+..+++.||||.+..........+.+.+|+++++.++||||+++++.+.. ...+|+|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            5999999999999999999999999999999997665555556678899999999999999999998864 446899999


Q ss_pred             ccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC-CCCcc
Q psy2648         126 YASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLD  202 (708)
Q Consensus       126 y~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~-~~~~~  202 (708)
                      |+++++|.+++...  ..+++.++..++.||+.||+|||++||+||||||+||+++.++.++|+|||++..... .....
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~  160 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS  160 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence            99999999998763  4589999999999999999999999999999999999999999999999999876532 22334


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHhhh
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCENLLKKFLV  281 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~-~~p~~~s~~~~~Li~~~L~  281 (708)
                      ...|++.|+|||++.+..++ .++|||||||++|+|++|..||...+.......+..+.. ..|...++++.++|.+||+
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  239 (257)
T cd08223         161 TLIGTPYYMSPELFSNKPYN-YKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATMLS  239 (257)
T ss_pred             cccCCcCccChhHhcCCCCC-chhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHhc
Confidence            56789999999999887764 789999999999999999999998888777777777655 4566788999999999999


Q ss_pred             hCCCCCCCHHHHh
Q psy2648         282 LNPAKRASLEVSG  294 (708)
Q Consensus       282 ~dP~~Rps~~~~~  294 (708)
                      .||.+||++.++.
T Consensus       240 ~~p~~Rp~~~~~l  252 (257)
T cd08223         240 KRPEKRPSVKSIL  252 (257)
T ss_pred             cCcccCCCHHHHh
Confidence            9999999999876


No 127
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00  E-value=4.2e-42  Score=377.55  Aligned_cols=250  Identities=24%  Similarity=0.399  Sum_probs=207.9

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCC-----cEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEe
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTG-----KEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIET  116 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg-----~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~  116 (708)
                      ...++|++.+.||+|+||.||+|.+..++     +.||||++..... ....+.+.+|+++|+.+ +|||||++++++..
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~  113 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-TDEREALMSELKILSHLGQHKNIVNLLGACTH  113 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-HHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence            33457999999999999999999875544     5799999976532 33456788999999999 89999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHHHc---------------------------------------------------------
Q psy2648         117 EKTLYLVMEYASGGEVFDYLVLH---------------------------------------------------------  139 (708)
Q Consensus       117 ~~~~ylVmEy~~gg~L~~~i~~~---------------------------------------------------------  139 (708)
                      ...+|+|||||++|+|.+++..+                                                         
T Consensus       114 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (374)
T cd05106         114 GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ  193 (374)
T ss_pred             CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence            99999999999999999998643                                                         


Q ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc---cc
Q psy2648         140 -------------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL---DT  203 (708)
Q Consensus       140 -------------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~---~~  203 (708)
                                   .++++.+++.++.||+.||+|||++||+||||||+|||+++++.+||+|||+++........   .+
T Consensus       194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~  273 (374)
T cd05106         194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN  273 (374)
T ss_pred             cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence                         13678889999999999999999999999999999999999999999999998765433211   12


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHhh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG--KYRIPFYMSTDCENLLKKFL  280 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~--~~~~p~~~s~~~~~Li~~~L  280 (708)
                      ..+++.|+|||++.+..++ .++|||||||++|+|++ |..||...........+...  ....|...++++.++|.+||
T Consensus       274 ~~~~~~y~aPE~~~~~~~~-~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  352 (374)
T cd05106         274 ARLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCW  352 (374)
T ss_pred             CCCccceeCHHHhcCCCCC-ccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHc
Confidence            2345679999999877774 79999999999999997 99999876554433333333  23456677899999999999


Q ss_pred             hhCCCCCCCHHHHh
Q psy2648         281 VLNPAKRASLEVSG  294 (708)
Q Consensus       281 ~~dP~~Rps~~~~~  294 (708)
                      +.||.+||+++++.
T Consensus       353 ~~dp~~RPs~~~l~  366 (374)
T cd05106         353 NLEPTERPTFSQIS  366 (374)
T ss_pred             CCChhhCcCHHHHH
Confidence            99999999999876


No 128
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00  E-value=1.9e-41  Score=359.98  Aligned_cols=252  Identities=31%  Similarity=0.500  Sum_probs=211.1

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      .+++|++.+.||+|+||.||+|.+..+++.||+|.+...... .....+.+|+.+++.++||||+++++++..+..+|+|
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv   82 (301)
T cd07873           4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV   82 (301)
T ss_pred             cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence            467899999999999999999999999999999998754322 2234577899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCc
Q psy2648         124 MEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKL  201 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~  201 (708)
                      |||+. ++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... ...
T Consensus        83 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  161 (301)
T cd07873          83 FEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY  161 (301)
T ss_pred             Eeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcc
Confidence            99997 5899888764 46899999999999999999999999999999999999999999999999998754322 223


Q ss_pred             cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-------------------CC
Q psy2648         202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-------------------KY  262 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-------------------~~  262 (708)
                      ....+++.|+|||++.+....+.++|||||||++|+|++|+.||.+.+..+....+...                   .+
T Consensus       162 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (301)
T cd07873         162 SNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSY  241 (301)
T ss_pred             cccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccccc
Confidence            34567899999999876554457899999999999999999999988766554443221                   01


Q ss_pred             CCC-----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhh
Q psy2648         263 RIP-----------FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       263 ~~p-----------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                      ..|           ..+++++.+||.+||+.||.+|||+++++   |+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~  290 (301)
T cd07873         242 NYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFH  290 (301)
T ss_pred             ccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence            112           13678899999999999999999999987   664


No 129
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00  E-value=3.9e-41  Score=347.86  Aligned_cols=247  Identities=32%  Similarity=0.548  Sum_probs=222.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++++.||+|+||.|+++++..+++.||+|.+.....+....+.+.+|+++|++++||||+++++++.+...++++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            59999999999999999999999999999999987666666667788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccc
Q psy2648         127 ASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDT  203 (708)
Q Consensus       127 ~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~  203 (708)
                      +++++|.+++...  ..+++.++..++.|++.||.|||+.|++||||||+||+++.++.+||+|||++....... ....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~  160 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET  160 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence            9999999999765  468999999999999999999999999999999999999999999999999987654322 3345


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHhhhh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR-IPFYMSTDCENLLKKFLVL  282 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~-~p~~~s~~~~~Li~~~L~~  282 (708)
                      ..|++.|+|||++.+..++ .++|||||||++|+|++|..||...+..+....+..+.+. .+...+.++.++|.+||..
T Consensus       161 ~~~~~~y~ape~~~~~~~~-~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  239 (256)
T cd08221         161 VVGTPYYMSPELCQGVKYN-FKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQ  239 (256)
T ss_pred             cCCCccccCHhhcCCCCCC-CcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHccc
Confidence            6789999999999877654 7899999999999999999999998888888888877654 3455789999999999999


Q ss_pred             CCCCCCCHHHHh
Q psy2648         283 NPAKRASLEVSG  294 (708)
Q Consensus       283 dP~~Rps~~~~~  294 (708)
                      ||.+||++++++
T Consensus       240 ~p~~R~s~~~ll  251 (256)
T cd08221         240 DPEKRPTADEVL  251 (256)
T ss_pred             CcccCCCHHHHh
Confidence            999999999876


No 130
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00  E-value=1.9e-41  Score=351.31  Aligned_cols=240  Identities=28%  Similarity=0.467  Sum_probs=208.8

Q ss_pred             EEcccCceEEEEEEE--cCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCC
Q psy2648          53 TIGKGNFAKVKLAKH--VPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGG  130 (708)
Q Consensus        53 ~LG~G~fg~V~la~~--~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg  130 (708)
                      +||+|+||.||+|.+  ..+++.||||+++....+....+.+.+|+.+++.++||||++++++++. ...++||||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence            689999999999965  4678899999997665555556778899999999999999999998864 5679999999999


Q ss_pred             ChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC----cccccc
Q psy2648         131 EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK----LDTFCG  206 (708)
Q Consensus       131 ~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~----~~~~~G  206 (708)
                      +|.+++.....+++..+..++.||+.||+|||++||+||||||.|||++.++.+||+|||+++.......    .....+
T Consensus        81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  160 (257)
T cd05116          81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKW  160 (257)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCC
Confidence            9999998888899999999999999999999999999999999999999999999999999876543221    122344


Q ss_pred             CCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHhhhhCC
Q psy2648         207 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLLKKFLVLNP  284 (708)
Q Consensus       207 t~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~~~L~~dP  284 (708)
                      ++.|+|||++....++ .++|||||||++|+|++ |..||.+.+..++.+.+..+. ...|...++++.+||.+||+.||
T Consensus       161 ~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p  239 (257)
T cd05116         161 PVKWYAPECMNYYKFS-SKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGV  239 (257)
T ss_pred             CccccCHhHhccCCcC-chhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCc
Confidence            6789999998776654 78999999999999998 999999988888888888764 35677889999999999999999


Q ss_pred             CCCCCHHHHh
Q psy2648         285 AKRASLEVSG  294 (708)
Q Consensus       285 ~~Rps~~~~~  294 (708)
                      ++||+++++.
T Consensus       240 ~~Rp~~~~i~  249 (257)
T cd05116         240 DERPGFAVVE  249 (257)
T ss_pred             hhCcCHHHHH
Confidence            9999999876


No 131
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=100.00  E-value=6.3e-42  Score=370.84  Aligned_cols=250  Identities=24%  Similarity=0.440  Sum_probs=207.2

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC------C
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE------K  118 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------~  118 (708)
                      .++|++++.||+|+||.||+|.+..+++.||||++.+........+.+.+|+++|+.++||||+++++++...      .
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN   93 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence            4689999999999999999999999999999999976543334456678999999999999999999988643      4


Q ss_pred             EEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC
Q psy2648         119 TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG  198 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~  198 (708)
                      .+|++||++ +++|.+++. ...+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... 
T Consensus        94 ~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~-  170 (343)
T cd07878          94 EVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD-  170 (343)
T ss_pred             cEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCC-
Confidence            579999998 678887664 56799999999999999999999999999999999999999999999999999976532 


Q ss_pred             CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-----------------
Q psy2648         199 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK-----------------  261 (708)
Q Consensus       199 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~-----------------  261 (708)
                       .....+||+.|+|||++.+....+.++|||||||++|+|++|+.||.+.+..+....+....                 
T Consensus       171 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (343)
T cd07878         171 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHAR  249 (343)
T ss_pred             -CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHH
Confidence             33456899999999999874434579999999999999999999998876554443332110                 


Q ss_pred             ------CCCC--------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         262 ------YRIP--------FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       262 ------~~~p--------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                            ...|        ...++.+.+||.+||..||.+|||+++++   |+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~  303 (343)
T cd07878         250 KYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ  303 (343)
T ss_pred             HHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence                  0011        12456789999999999999999999988   6653


No 132
>PTZ00284 protein kinase; Provisional
Probab=100.00  E-value=1e-41  Score=385.19  Aligned_cols=247  Identities=23%  Similarity=0.361  Sum_probs=200.7

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC------CCCeeeEEEEEEeC-
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD------HPNIVKLFQVIETE-  117 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~------HpnIv~l~~~~~~~-  117 (708)
                      .++|++++.||+|+||+||+|.+..+++.||||+++...   .....+..|+++++.++      |++|+++++++..+ 
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~  204 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET  204 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence            468999999999999999999999999999999996432   22234556777777665      45689999998765 


Q ss_pred             CEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCCEEEcCCC--------------
Q psy2648         118 KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLLDSEM--------------  182 (708)
Q Consensus       118 ~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~-~gIvHRDLKPeNILld~~~--------------  182 (708)
                      .++|||||++ |++|.+++...+.+++.+++.++.||+.||+|||+ .|||||||||+|||++.++              
T Consensus       205 ~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~  283 (467)
T PTZ00284        205 GHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPD  283 (467)
T ss_pred             ceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCC
Confidence            5789999998 67999999888899999999999999999999998 5999999999999998765              


Q ss_pred             --cEEEEeccCccccCCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Q psy2648         183 --NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG  260 (708)
Q Consensus       183 --~iKL~DFGls~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~  260 (708)
                        .+||+|||++....  ......+||+.|+|||++.+..|+ .++|||||||+||||++|++||.+.+..+....+...
T Consensus       284 ~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~-~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~  360 (467)
T PTZ00284        284 PCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWM-YSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKT  360 (467)
T ss_pred             CceEEECCCCccccCc--cccccccCCccccCcHHhhcCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence              49999999875432  233567899999999999998875 7999999999999999999999987765544333221


Q ss_pred             CCCCC------------------------C------------------CCCHHHHHHHHHhhhhCCCCCCCHHHHh---h
Q psy2648         261 KYRIP------------------------F------------------YMSTDCENLLKKFLVLNPAKRASLEVSG---E  295 (708)
Q Consensus       261 ~~~~p------------------------~------------------~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~  295 (708)
                      .-.+|                        .                  ..++.+.|||.+||++||.+|||+++++   |
T Consensus       361 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~  440 (467)
T PTZ00284        361 LGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPY  440 (467)
T ss_pred             cCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcc
Confidence            00000                        0                  1135577999999999999999999988   7


Q ss_pred             hhh
Q psy2648         296 VTL  298 (708)
Q Consensus       296 ~~~  298 (708)
                      +..
T Consensus       441 ~~~  443 (467)
T PTZ00284        441 VLK  443 (467)
T ss_pred             ccc
Confidence            753


No 133
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00  E-value=3.9e-41  Score=359.40  Aligned_cols=249  Identities=28%  Similarity=0.485  Sum_probs=212.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++|++.+.||+|+||.||++.+..+++.||+|.+.... .......+.+|+++++.++||||+++++++.+++.+|+|||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   79 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME   79 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence            36999999999999999999999999999999987542 33445668899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcccc
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~-~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~  204 (708)
                      |+++++|.+++...+.+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||++..... ......
T Consensus        80 y~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-~~~~~~  158 (308)
T cd06615          80 HMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSF  158 (308)
T ss_pred             ccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc-cccccC
Confidence            99999999999888899999999999999999999997 6999999999999999999999999999875532 223557


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC------------------------
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG------------------------  260 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~------------------------  260 (708)
                      +|++.|+|||++.+..++ .++|||||||++|+|++|..||...+...+...+...                        
T Consensus       159 ~~~~~~~aPE~~~~~~~~-~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (308)
T cd06615         159 VGTRSYMSPERLQGTHYT-VQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPM  237 (308)
T ss_pred             CCCcCccChhHhcCCCCC-ccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchh
Confidence            899999999999887764 7899999999999999999999766544433322111                        


Q ss_pred             -------------CCCCCC-CCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhh
Q psy2648         261 -------------KYRIPF-YMSTDCENLLKKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       261 -------------~~~~p~-~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                                   ....|. ..+.++.+||.+||..||++||+++++.   |+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~  291 (308)
T cd06615         238 AIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIK  291 (308)
T ss_pred             hHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence                         111121 2577899999999999999999999987   664


No 134
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00  E-value=3.4e-41  Score=353.81  Aligned_cols=247  Identities=31%  Similarity=0.498  Sum_probs=204.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++.+.||+|+||.||+|++..+++.||||++............+.+|+.+++.++||||+++++++.++..+|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            58999999999999999999999999999999876544333445678899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Ccc
Q psy2648         127 ASGGEVFDYLVLH---GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLD  202 (708)
Q Consensus       127 ~~gg~L~~~i~~~---~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~  202 (708)
                      ++ ++|.+++...   ..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... ...
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  159 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYT  159 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCccccc
Confidence            98 5898888643   468999999999999999999999999999999999999999999999999987543222 223


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC--C-------------------
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG--K-------------------  261 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~--~-------------------  261 (708)
                      ...+++.|+|||++.+....+.++|||||||++|+|++|+.||.+.+.......+...  .                   
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
T cd07861         160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTF  239 (285)
T ss_pred             CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhc
Confidence            3467889999999876543357899999999999999999999876543322221110  0                   


Q ss_pred             --C------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         262 --Y------RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       262 --~------~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                        .      .....+++++.+||++||+.||.+|||+++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll  280 (285)
T cd07861         240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKAL  280 (285)
T ss_pred             cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHh
Confidence              0      01224688999999999999999999999876


No 135
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00  E-value=1.3e-41  Score=373.71  Aligned_cols=249  Identities=24%  Similarity=0.407  Sum_probs=207.5

Q ss_pred             cCCeEEEeEEcccCceEEEEEEE-----cCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCC
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKH-----VPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIETEK  118 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~-----~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~  118 (708)
                      .++|++.+.||+|+||.||+|.+     ..++..||||+++.... ....+.+.+|+++|+.+ +|||||++++++....
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~  112 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACTVGG  112 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence            34799999999999999999974     35677899999975432 23456788999999999 8999999999999999


Q ss_pred             EEEEEEeccCCCChHHHHHHcC----------------------------------------------------------
Q psy2648         119 TLYLVMEYASGGEVFDYLVLHG----------------------------------------------------------  140 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~~----------------------------------------------------------  140 (708)
                      ..|+|||||++|+|.+++....                                                          
T Consensus       113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (375)
T cd05104         113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG  192 (375)
T ss_pred             cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence            9999999999999999986532                                                          


Q ss_pred             -----------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc--
Q psy2648         141 -----------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL--  201 (708)
Q Consensus       141 -----------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~--  201 (708)
                                       .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........  
T Consensus       193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  272 (375)
T cd05104         193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV  272 (375)
T ss_pred             eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccc
Confidence                             3678889999999999999999999999999999999999999999999999765432211  


Q ss_pred             -cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHH-HHHHHHHcCC-CCCCCCCCHHHHHHHH
Q psy2648         202 -DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLR-ELRERVLRGK-YRIPFYMSTDCENLLK  277 (708)
Q Consensus       202 -~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~-~l~~~i~~~~-~~~p~~~s~~~~~Li~  277 (708)
                       ....+++.|+|||++.+..++ .++|||||||++|+|++ |..||.+.... .+.+.+..+. ...|...+.++.+||.
T Consensus       273 ~~~~~~~~~y~aPE~~~~~~~~-~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  351 (375)
T cd05104         273 KGNARLPVKWMAPESIFNCVYT-FESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMK  351 (375)
T ss_pred             cCCCCCCcceeChhHhcCCCCC-CCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHH
Confidence             123355679999999888775 79999999999999998 99999876543 4444444442 2345667889999999


Q ss_pred             HhhhhCCCCCCCHHHHhh
Q psy2648         278 KFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       278 ~~L~~dP~~Rps~~~~~~  295 (708)
                      +||..||++||++.++..
T Consensus       352 ~cl~~dP~~RPs~~eil~  369 (375)
T cd05104         352 SCWDADPLKRPTFKQIVQ  369 (375)
T ss_pred             HHccCChhHCcCHHHHHH
Confidence            999999999999998873


No 136
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00  E-value=2.2e-41  Score=360.40  Aligned_cols=250  Identities=29%  Similarity=0.429  Sum_probs=210.8

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcE--EEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCE
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKE--VAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKT  119 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~--vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~  119 (708)
                      ..+++|++.+.||+|+||.||+|.+..++..  +|+|.+... ........+.+|+.++.++ +||||++++++++..+.
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~   82 (303)
T cd05088           4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY   82 (303)
T ss_pred             cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCC
Confidence            3467899999999999999999999888865  466665432 2334456788999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCc
Q psy2648         120 LYLVMEYASGGEVFDYLVLHG----------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN  183 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~----------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~  183 (708)
                      +|+||||+++++|.+++...+                .+++.+++.++.||+.||+|||++||+||||||+|||++.++.
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~  162 (303)
T cd05088          83 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV  162 (303)
T ss_pred             ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCc
Confidence            999999999999999997543                4788999999999999999999999999999999999999999


Q ss_pred             EEEEeccCccccCCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-
Q psy2648         184 IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-  261 (708)
Q Consensus       184 iKL~DFGls~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-  261 (708)
                      +||+|||+++............+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+..++.+.+..+. 
T Consensus       163 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~  241 (303)
T cd05088         163 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVY-TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR  241 (303)
T ss_pred             EEeCccccCcccchhhhcccCCCcccccCHHHHhccCC-cccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCc
Confidence            99999999864322111122234567999999987765 479999999999999998 999999888888877776552 


Q ss_pred             CCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         262 YRIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       262 ~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ...|...++++.+||.+||..||++||+++++.
T Consensus       242 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il  274 (303)
T cd05088         242 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL  274 (303)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            345666789999999999999999999999877


No 137
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00  E-value=1e-41  Score=352.89  Aligned_cols=247  Identities=32%  Similarity=0.557  Sum_probs=219.9

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      +|++.+.||.|+||.||+|.+..+++.||+|++.+.... ....+.+.+|++++++++||||+++++.++....+|+|||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            599999999999999999999999999999999875443 2456778899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccccc
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFC  205 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~~  205 (708)
                      |+.+++|.+++.....+++.++..++.||+.||.|||+++|+|+||||+||++++++.++|+|||++.............
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~  160 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS  160 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccC
Confidence            99999999999888889999999999999999999999999999999999999999999999999987665444445667


Q ss_pred             cCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhh
Q psy2648         206 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST---LRELRERVLRGKYRIPFYMSTDCENLLKKFLVL  282 (708)
Q Consensus       206 Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~---~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~  282 (708)
                      |+..|+|||++.+..+ +.++|+||||+++|+|++|..||...+   ...+.+.........|...+.++.++|++||..
T Consensus       161 ~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  239 (258)
T cd05578         161 GTPGYMAPEVLCRQGY-SVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINKLLER  239 (258)
T ss_pred             CChhhcCHHHHcccCC-CCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHHHccC
Confidence            8999999999987775 479999999999999999999999876   455555554455667778899999999999999


Q ss_pred             CCCCCCCH--HHHh
Q psy2648         283 NPAKRASL--EVSG  294 (708)
Q Consensus       283 dP~~Rps~--~~~~  294 (708)
                      ||.+||++  ++++
T Consensus       240 ~p~~R~~~~~~~l~  253 (258)
T cd05578         240 DPQKRLGDNLKDLK  253 (258)
T ss_pred             ChhHcCCccHHHHh
Confidence            99999999  6655


No 138
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=100.00  E-value=2.6e-41  Score=351.70  Aligned_cols=247  Identities=28%  Similarity=0.445  Sum_probs=208.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++.....  .....+.+|+.+++.++||||+++++++..+..+|+|||
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e   86 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME   86 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence            479999999999999999999999999999999975432  233457789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCcccc
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~~~  204 (708)
                      |+++++|.+++...+.+++.++..++.||+.||+|||+++|+||||||+||+++.++.+||+|||++...... ......
T Consensus        87 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~  166 (267)
T cd06646          87 YCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSF  166 (267)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCcc
Confidence            9999999999988888999999999999999999999999999999999999999999999999998765432 223446


Q ss_pred             ccCCcccccccccC---CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCC-----CCCCHHHHHHH
Q psy2648         205 CGSPPYAAPELFQG---KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP-----FYMSTDCENLL  276 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~---~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p-----~~~s~~~~~Li  276 (708)
                      .|++.|+|||.+.+   ..+ +.++|||||||++|+|++|..||...+..+....+....+..|     ...+.++.+||
T Consensus       167 ~~~~~y~~PE~~~~~~~~~~-~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  245 (267)
T cd06646         167 IGTPYWMAPEVAAVEKNGGY-NQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFV  245 (267)
T ss_pred             ccCccccCHhHcccccCCCC-cchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHH
Confidence            78999999999853   223 3689999999999999999999976554433333323332222     24578999999


Q ss_pred             HHhhhhCCCCCCCHHHHhh
Q psy2648         277 KKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       277 ~~~L~~dP~~Rps~~~~~~  295 (708)
                      ++||..||++||+++++..
T Consensus       246 ~~~l~~~P~~Rp~~~~il~  264 (267)
T cd06646         246 KISLTKNPKKRPTAERLLT  264 (267)
T ss_pred             HHHhhCChhhCcCHHHHhc
Confidence            9999999999999998763


No 139
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00  E-value=5.8e-41  Score=348.71  Aligned_cols=249  Identities=26%  Similarity=0.512  Sum_probs=213.0

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      +++|++.+.||+|+||.||+|++..+++.||||.+..... .......+.+|+++++.++||||+++++++.+.+.+|+|
T Consensus         1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   80 (267)
T cd08228           1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV   80 (267)
T ss_pred             CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence            4689999999999999999999999999999999875432 344456688999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         124 MEYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       124 mEy~~gg~L~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      |||+++++|.+++..    ...+++..+..++.||+.||.|||+++|+||||||+|||++.++.++|+|||++.......
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~  160 (267)
T cd08228          81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence            999999999988753    2458999999999999999999999999999999999999999999999999987654322


Q ss_pred             -CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHcCCCC-CC-CCCCHHHHH
Q psy2648         200 -KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS--TLRELRERVLRGKYR-IP-FYMSTDCEN  274 (708)
Q Consensus       200 -~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~--~~~~l~~~i~~~~~~-~p-~~~s~~~~~  274 (708)
                       ......|++.|+|||.+.+..++ .++|||||||++|+|++|..||...  +..++.+.+....++ .| ...+.++.+
T Consensus       161 ~~~~~~~~~~~~~aPE~~~~~~~~-~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd08228         161 TAAHSLVGTPYYMSPERIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRE  239 (267)
T ss_pred             HHHhcCCCCccccChhhhccCCCC-chhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHH
Confidence             23346789999999999887764 7899999999999999999999764  345566666554332 22 356788999


Q ss_pred             HHHHhhhhCCCCCCCHHHHh
Q psy2648         275 LLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +|.+||..||++||+++++.
T Consensus       240 li~~cl~~~p~~Rp~~~~vl  259 (267)
T cd08228         240 LVSMCIYPDPDQRPDIGYVH  259 (267)
T ss_pred             HHHHHCCCCcccCcCHHHHH
Confidence            99999999999999999887


No 140
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00  E-value=5.5e-41  Score=352.13  Aligned_cols=249  Identities=31%  Similarity=0.511  Sum_probs=208.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++..........+.+.+|+.+++.++||||++++++++....+|+|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            47999999999999999999999999999999987554333334557899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Ccccc
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~~  204 (708)
                      |++++.|..++.....+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++....... .....
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDY  160 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCc
Confidence            99998888877766789999999999999999999999999999999999999999999999999997664433 23345


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC---------------CC----CCC
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG---------------KY----RIP  265 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~---------------~~----~~p  265 (708)
                      .++..|+|||++.+....+.++|||||||++|+|++|..||.+.+..+....+...               .+    ..|
T Consensus       161 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T cd07847         161 VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIP  240 (286)
T ss_pred             ccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCC
Confidence            68889999999877543457899999999999999999999876654433322210               00    011


Q ss_pred             ------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         266 ------------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       266 ------------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                  ...+.++.+||.+||..||++||++++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil  281 (286)
T cd07847         241 EPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELL  281 (286)
T ss_pred             CcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHh
Confidence                        13577899999999999999999999876


No 141
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00  E-value=2.8e-41  Score=353.56  Aligned_cols=249  Identities=25%  Similarity=0.417  Sum_probs=215.7

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcC-----CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVP-----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT  119 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~-----tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  119 (708)
                      .++|.+.+.||+|+||.||+|.+..     +++.||||++..... .+..+.+.+|+++|+.++||||+++++++.....
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   82 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS-NDARKDFEREAELLTNFQHENIVKFYGVCTEGDP   82 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC-HHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence            4579999999999999999998753     468899999875432 3345678899999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEE
Q psy2648         120 LYLVMEYASGGEVFDYLVLHG--------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIK  185 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~--------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iK  185 (708)
                      .|+||||+++++|.+++...+              .+++.++..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~k  162 (280)
T cd05049          83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVK  162 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEE
Confidence            999999999999999997653              378889999999999999999999999999999999999999999


Q ss_pred             EEeccCccccCCCC---CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC
Q psy2648         186 IADFGFSNEFTPGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK  261 (708)
Q Consensus       186 L~DFGls~~~~~~~---~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~  261 (708)
                      |+|||++.......   ......+++.|+|||++.+..++ +++|||||||++|+|++ |..||.+.+..++...+..+.
T Consensus       163 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~  241 (280)
T cd05049         163 IGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFT-TESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR  241 (280)
T ss_pred             ECCcccceecccCcceecCCCCcccceecChhhhccCCcc-hhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence            99999987543221   11233467889999999888775 78999999999999998 999999988888888888776


Q ss_pred             CC-CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHhh
Q psy2648         262 YR-IPFYMSTDCENLLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       262 ~~-~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      .. .|...+.++.+||.+||..||++||+++++..
T Consensus       242 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         242 LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            54 35578899999999999999999999998874


No 142
>KOG4721|consensus
Probab=100.00  E-value=7.7e-43  Score=374.22  Aligned_cols=234  Identities=26%  Similarity=0.446  Sum_probs=209.0

Q ss_pred             EEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Q psy2648          49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYAS  128 (708)
Q Consensus        49 ~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~  128 (708)
                      .-++.||.|+-|.||+|+.  .++.||||.++..         -..+|+.|++|+|||||.+.++|....-++||||||.
T Consensus       127 sELeWlGSGaQGAVF~Grl--~netVAVKKV~el---------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa  195 (904)
T KOG4721|consen  127 SELEWLGSGAQGAVFLGRL--HNETVAVKKVREL---------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCA  195 (904)
T ss_pred             hhhhhhccCcccceeeeec--cCceehhHHHhhh---------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccc
Confidence            3467899999999999986  5789999987521         2357888999999999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccccccCC
Q psy2648         129 GGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP  208 (708)
Q Consensus       129 gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~~Gt~  208 (708)
                      .|.|+..|+....+.......|..+|+.|++|||.+.|||||||.-||||..+..|||+|||-++.....+..-.+|||.
T Consensus       196 ~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTV  275 (904)
T KOG4721|consen  196 QGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTV  275 (904)
T ss_pred             cccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhH
Confidence            99999999998899999999999999999999999999999999999999999999999999999887666667899999


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHhhhhCCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG--KYRIPFYMSTDCENLLKKFLVLNPAK  286 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~--~~~~p~~~s~~~~~Li~~~L~~dP~~  286 (708)
                      .|||||++...+.. .|+|||||||+|||||||..||.+-+...++.-|-..  ..++|..++..++-||++||.-.|..
T Consensus       276 aWMAPEvIrnePcs-EKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRN  354 (904)
T KOG4721|consen  276 AWMAPEVIRNEPCS-EKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRN  354 (904)
T ss_pred             hhhCHHHhhcCCcc-cccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCC
Confidence            99999999998875 8999999999999999999999987766555444333  34578888999999999999999999


Q ss_pred             CCCHHHHh
Q psy2648         287 RASLEVSG  294 (708)
Q Consensus       287 Rps~~~~~  294 (708)
                      ||++.+|+
T Consensus       355 RPSFrqil  362 (904)
T KOG4721|consen  355 RPSFRQIL  362 (904)
T ss_pred             CccHHHHH
Confidence            99998876


No 143
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00  E-value=6.7e-41  Score=355.35  Aligned_cols=247  Identities=29%  Similarity=0.438  Sum_probs=210.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCc--EEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGK--EVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTLYL  122 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~--~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~yl  122 (708)
                      ++|++.+.||+|+||+||+|....++.  .+|+|.++.. ......+.+.+|+++++++ +||||+++++++.....+|+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l   80 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF-ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI   80 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc-CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence            579999999999999999999887775  4788887632 2334456788999999999 79999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEE
Q psy2648         123 VMEYASGGEVFDYLVLHG----------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKI  186 (708)
Q Consensus       123 VmEy~~gg~L~~~i~~~~----------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL  186 (708)
                      ||||+++++|.+++....                .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl  160 (297)
T cd05089          81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKI  160 (297)
T ss_pred             EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEE
Confidence            999999999999997542                4788999999999999999999999999999999999999999999


Q ss_pred             EeccCccccCCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCC
Q psy2648         187 ADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRI  264 (708)
Q Consensus       187 ~DFGls~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~  264 (708)
                      +|||++..............+..|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..++.+++..+. ...
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~  239 (297)
T cd05089         161 ADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYT-TKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEK  239 (297)
T ss_pred             CCcCCCccccceeccCCCCcCccccCchhhccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence            999998643221111122334579999999887764 78999999999999997 999999999888888887663 345


Q ss_pred             CCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         265 PFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       265 p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      |..++.++.+||.+||..||.+||+++++.
T Consensus       240 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~  269 (297)
T cd05089         240 PRNCDDEVYELMRQCWRDRPYERPPFAQIS  269 (297)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            667889999999999999999999999886


No 144
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00  E-value=1.3e-40  Score=355.90  Aligned_cols=252  Identities=33%  Similarity=0.569  Sum_probs=220.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCCh-hhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP-GSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      .+|++.+.||+|+||.||+|.+..+++.||||.+.+..... ...+.+..|+++++.++||||+++++.++....+|+||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            36999999999999999999999999999999998765442 34567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC---
Q psy2648         125 EYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN---  199 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~---  199 (708)
                      ||+.+++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.......   
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV  160 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence            999999999998754  568999999999999999999999999999999999999999999999999986542211   


Q ss_pred             ---------------------------CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHH
Q psy2648         200 ---------------------------KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRE  252 (708)
Q Consensus       200 ---------------------------~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~  252 (708)
                                                 ......|+..|+|||++.+..+ +.++|||||||++|+|++|..||.+.+..+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Di~slG~ll~~l~~g~~pf~~~~~~~  239 (316)
T cd05574         161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGH-GSAVDWWTLGILLYEMLYGTTPFKGSNRDE  239 (316)
T ss_pred             ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCC-CchHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence                                       1123468899999999988776 478999999999999999999999888877


Q ss_pred             HHHHHHcCCCCCCCC--CCHHHHHHHHHhhhhCCCCCCC----HHHHh---hhhh
Q psy2648         253 LRERVLRGKYRIPFY--MSTDCENLLKKFLVLNPAKRAS----LEVSG---EVTL  298 (708)
Q Consensus       253 l~~~i~~~~~~~p~~--~s~~~~~Li~~~L~~dP~~Rps----~~~~~---~~~~  298 (708)
                      ....+......+|..  .+.++.++|.+||..||++||+    +++++   |+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~  294 (316)
T cd05574         240 TFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG  294 (316)
T ss_pred             HHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence            777777666666554  6899999999999999999999    88877   7754


No 145
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=100.00  E-value=1e-40  Score=344.05  Aligned_cols=247  Identities=35%  Similarity=0.592  Sum_probs=220.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++.+.||+|+||.||+|.+..+++.||||.+..........+.+.+|+++|+.++||||+++++.+...+.+++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            59999999999999999999999999999999987766656667888999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCC-cEEEEeccCccccCCCCCccc
Q psy2648         127 ASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDT  203 (708)
Q Consensus       127 ~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~-~iKL~DFGls~~~~~~~~~~~  203 (708)
                      +++++|.+++...  ..+++..+..++.|++.||+|||++||+||||||+||+++.++ .+||+|||++...........
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~  160 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT  160 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccc
Confidence            9999999999764  3489999999999999999999999999999999999998654 579999999987654444455


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHhhhh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCENLLKKFLVL  282 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~-~~p~~~s~~~~~Li~~~L~~  282 (708)
                      ..|++.|+|||.+.+..+ +.++|||||||++|+|++|..||.+.+.......+..+.. .+|...++++.++|.+||..
T Consensus       161 ~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  239 (256)
T cd08220         161 VVGTPCYISPELCEGKPY-NQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNL  239 (256)
T ss_pred             cccCCcccCchhccCCCC-CcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHccC
Confidence            678999999999987765 4789999999999999999999999888777777766543 46667899999999999999


Q ss_pred             CCCCCCCHHHHh
Q psy2648         283 NPAKRASLEVSG  294 (708)
Q Consensus       283 dP~~Rps~~~~~  294 (708)
                      ||.+|||++++.
T Consensus       240 ~p~~Rpt~~~ll  251 (256)
T cd08220         240 DPSKRPQLSQIM  251 (256)
T ss_pred             ChhhCCCHHHHh
Confidence            999999999876


No 146
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00  E-value=1.7e-41  Score=356.29  Aligned_cols=247  Identities=30%  Similarity=0.530  Sum_probs=204.9

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++.+.||+|+||.||+|.+..+|+.||+|++............+.+|+++++.++||||+++++++.+...+|+||||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            59999999999999999999999999999999976543333345677899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCcccc
Q psy2648         127 ASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTF  204 (708)
Q Consensus       127 ~~gg~L~~~i~~-~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~~~  204 (708)
                      +.+ +|.+++.. .+.+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++...... ......
T Consensus        81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  159 (284)
T cd07839          81 CDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAE  159 (284)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCC
Confidence            974 78888765 467999999999999999999999999999999999999999999999999998765432 222345


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCC-CCCCHHHHHHHHHcC----------------CC-----
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGSTLRELRERVLRG----------------KY-----  262 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf-~~~~~~~l~~~i~~~----------------~~-----  262 (708)
                      .+++.|+|||++.+....+.++|||||||++|+|++|..|| .+.+..+..+.+.+.                .+     
T Consensus       160 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd07839         160 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPM  239 (284)
T ss_pred             ccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCC
Confidence            67899999999877654457899999999999999998885 444544443333211                00     


Q ss_pred             --------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         263 --------RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       263 --------~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                              .....+++++.+||++||..||.+|||+++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il  279 (284)
T cd07839         240 YPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEAL  279 (284)
T ss_pred             CCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHh
Confidence                    00123678999999999999999999999876


No 147
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00  E-value=8.6e-41  Score=347.43  Aligned_cols=247  Identities=30%  Similarity=0.491  Sum_probs=213.7

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCCh-------hhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP-------GSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT  119 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~-------~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  119 (708)
                      +|.+.+.||+|+||.||+|.+..+++.||+|.+.......       ...+.+.+|+.+++.++||||+++++++..+..
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            4788999999999999999999999999999987654321       123457789999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         120 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      .|+||||+++++|.+++...+.+++..++.++.||+.||+|||++|++||||||+|||++.++.+||+|||+++......
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS  160 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence            99999999999999999888889999999999999999999999999999999999999999999999999987654211


Q ss_pred             -------CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHH
Q psy2648         200 -------KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-KYRIPFYMSTD  271 (708)
Q Consensus       200 -------~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-~~~~p~~~s~~  271 (708)
                             ......|++.|+|||.+.+..++ .++|||||||++|+|++|..||.+.+.......+... ...+|...+.+
T Consensus       161 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd06628         161 LSTKTNGARPSLQGSVFWMAPEVVKQTSYT-RKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSE  239 (267)
T ss_pred             ccCCccccccccCCCcCccChhHhccCCCC-chhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCcccCHH
Confidence                   11245689999999999887764 7899999999999999999999887655544454443 33466778899


Q ss_pred             HHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         272 CENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       272 ~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +.++|++||+.||.+||+++++.
T Consensus       240 ~~~li~~~l~~~p~~Rp~~~~il  262 (267)
T cd06628         240 AIDFLEKTFEIDHNKRPTAAELL  262 (267)
T ss_pred             HHHHHHHHccCCchhCcCHHHHh
Confidence            99999999999999999999876


No 148
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00  E-value=1.1e-40  Score=344.44  Aligned_cols=247  Identities=34%  Similarity=0.636  Sum_probs=220.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEe--CCEEEEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIET--EKTLYLVM  124 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~ylVm  124 (708)
                      +|++++.||.|+||.||+|.+..+++.||+|++..........+.+..|+++++.++||||+++++.+..  ...+|++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            5899999999999999999999999999999998766666666778899999999999999999998754  45789999


Q ss_pred             eccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-----HCCceecCCCCCCEEEcCCCcEEEEeccCcccc
Q psy2648         125 EYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCH-----QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF  195 (708)
Q Consensus       125 Ey~~gg~L~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH-----~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~  195 (708)
                      ||+++++|.+++..    ...+++.+++.++.||+.||.|||     +.+|+|+||||+||+++.++.+||+|||++...
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            99999999999876    357899999999999999999999     999999999999999999999999999998876


Q ss_pred             CCCCC-ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHH
Q psy2648         196 TPGNK-LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCE  273 (708)
Q Consensus       196 ~~~~~-~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~-~~p~~~s~~~~  273 (708)
                      ..... .....|++.|+|||++.+..++ .++|+|||||++|+|++|..||...+..++.+.+..+.+ .+|...+.++.
T Consensus       161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (265)
T cd08217         161 GHDSSFAKTYVGTPYYMSPEQLNHMSYD-EKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELN  239 (265)
T ss_pred             cCCcccccccccCCCccChhhhcCCCCC-chhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHHH
Confidence            54332 3456789999999999887764 789999999999999999999999888888888887765 35677889999


Q ss_pred             HHHHHhhhhCCCCCCCHHHHh
Q psy2648         274 NLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       274 ~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +++.+||..||.+||+++++.
T Consensus       240 ~l~~~~l~~~p~~Rp~~~~il  260 (265)
T cd08217         240 EVIKSMLNVDPDKRPSTEELL  260 (265)
T ss_pred             HHHHHHccCCcccCCCHHHHh
Confidence            999999999999999999876


No 149
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00  E-value=7.5e-41  Score=348.34  Aligned_cols=246  Identities=23%  Similarity=0.410  Sum_probs=210.9

Q ss_pred             eEEEeEEcccCceEEEEEEEcC---CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE-----
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVP---TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT-----  119 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~---tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~-----  119 (708)
                      |++++.||+|+||.||+|.+..   ++..||||++............+.+|+.+|+.++||||+++++++.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            6788999999999999999765   34789999998665555556778999999999999999999998765443     


Q ss_pred             -EEEEEeccCCCChHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCc
Q psy2648         120 -LYLVMEYASGGEVFDYLVLH------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS  192 (708)
Q Consensus       120 -~ylVmEy~~gg~L~~~i~~~------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls  192 (708)
                       .++||||+++|+|..++...      ..+++..+..++.||+.||.|||+++|+||||||+|||+++++.+||+|||++
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  160 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS  160 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence             79999999999999988543      35899999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCC
Q psy2648         193 NEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFY  267 (708)
Q Consensus       193 ~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~  267 (708)
                      +.......   .....++..|+|||.+.+..++ .++|||||||++|||++ |..||.+.+..++.+.+..+. ...|..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  239 (273)
T cd05035         161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYT-SKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPED  239 (273)
T ss_pred             eeccccccccccccccCCccccCHhhcccCCCC-cccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcC
Confidence            76543221   1123456789999999877664 79999999999999999 999999988888888877664 346778


Q ss_pred             CCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         268 MSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       268 ~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .+.++.++|.+||+.||++||++.++.
T Consensus       240 ~~~~~~~li~~~l~~~p~~Rp~~~e~~  266 (273)
T cd05035         240 CLDELYDLMYSCWRADPKDRPTFTKLR  266 (273)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            899999999999999999999999876


No 150
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00  E-value=1.1e-40  Score=350.59  Aligned_cols=249  Identities=23%  Similarity=0.432  Sum_probs=213.6

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEc----CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHV----PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT  119 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~----~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  119 (708)
                      .+..|++.+.||+|+||.||+|...    .+++.||+|.+.... .......+.+|+++++.++||||+++++++.....
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   81 (283)
T cd05090           3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP   81 (283)
T ss_pred             ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence            3567999999999999999999863    456789999987533 23445678899999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcC-----------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCC
Q psy2648         120 LYLVMEYASGGEVFDYLVLHG-----------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM  182 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~-----------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~  182 (708)
                      .|+||||+++++|.+++....                 .+++.++..++.||+.||+|||++||+||||||+|||++.++
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~  161 (283)
T cd05090          82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQL  161 (283)
T ss_pred             eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCC
Confidence            999999999999999986432                 378889999999999999999999999999999999999999


Q ss_pred             cEEEEeccCccccCCCC---CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy2648         183 NIKIADFGFSNEFTPGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVL  258 (708)
Q Consensus       183 ~iKL~DFGls~~~~~~~---~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~  258 (708)
                      .+||+|||+++......   ......++..|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..++.+.+.
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~  240 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFS-SDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVR  240 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCC-chhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            99999999997653322   22344567789999999877764 79999999999999998 999999888888888777


Q ss_pred             cCCC-CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         259 RGKY-RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       259 ~~~~-~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .... ..|...++++.++|.+||+.||.+||+++++.
T Consensus       241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~  277 (283)
T cd05090         241 KRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIH  277 (283)
T ss_pred             cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence            6543 45667889999999999999999999999876


No 151
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=100.00  E-value=2.7e-41  Score=351.50  Aligned_cols=246  Identities=28%  Similarity=0.456  Sum_probs=208.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++|++.+.||+|+||.||+|++..+++.||||+++...  ......+.+|+.+++.++||||+++++++...+.+|+|||
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e   86 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME   86 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence            47999999999999999999999999999999987543  2234457789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCcccc
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~~~  204 (708)
                      |+++++|.+++...+.+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++...... ......
T Consensus        87 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  166 (267)
T cd06645          87 FCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSF  166 (267)
T ss_pred             ccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccc
Confidence            9999999999988889999999999999999999999999999999999999999999999999998655322 223456


Q ss_pred             ccCCccccccccc---CCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCC-----CCCCHHHHHHH
Q psy2648         205 CGSPPYAAPELFQ---GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP-----FYMSTDCENLL  276 (708)
Q Consensus       205 ~Gt~~Y~APE~l~---~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p-----~~~s~~~~~Li  276 (708)
                      .|++.|+|||++.   ...+ ..++|||||||++|+|++|..||...........+....+..|     ...+.++.++|
T Consensus       167 ~~~~~y~aPE~~~~~~~~~~-~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  245 (267)
T cd06645         167 IGTPYWMAPEVAAVERKGGY-NQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFV  245 (267)
T ss_pred             cCcccccChhhhccccCCCC-CchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHH
Confidence            7999999999974   3334 4789999999999999999999976554433333333333222     13567899999


Q ss_pred             HHhhhhCCCCCCCHHHHh
Q psy2648         277 KKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       277 ~~~L~~dP~~Rps~~~~~  294 (708)
                      .+||..||++||+++++.
T Consensus       246 ~~~l~~~P~~R~~~~~ll  263 (267)
T cd06645         246 KMALTKNPKKRPTAEKLL  263 (267)
T ss_pred             HHHccCCchhCcCHHHHh
Confidence            999999999999998765


No 152
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00  E-value=1.4e-40  Score=354.24  Aligned_cols=245  Identities=34%  Similarity=0.587  Sum_probs=214.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      .+|++.+.||+|+||.||++.+..+++.||||.+.+.... ......+.+|+++++.++||||+++++.++.+..+|+||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            3699999999999999999999999999999999765432 234557789999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC------
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG------  198 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~------  198 (708)
                      ||++|++|.+++...+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....      
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (305)
T cd05609          81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY  160 (305)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence            99999999999988888999999999999999999999999999999999999999999999999998632110      


Q ss_pred             ----------CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCC--
Q psy2648         199 ----------NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF--  266 (708)
Q Consensus       199 ----------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~--  266 (708)
                                .......|++.|+|||.+.+..+ +.++|||||||++|+|++|..||.+.+..++.+.+..+....|.  
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  239 (305)
T cd05609         161 EGHIEKDTREFLDKQVCGTPEYIAPEVILRQGY-GKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGD  239 (305)
T ss_pred             ccccccchhhccccCCccCccccCchhccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCcc
Confidence                      01123568889999999987766 47899999999999999999999998888888888877655443  


Q ss_pred             -CCCHHHHHHHHHhhhhCCCCCCCHH
Q psy2648         267 -YMSTDCENLLKKFLVLNPAKRASLE  291 (708)
Q Consensus       267 -~~s~~~~~Li~~~L~~dP~~Rps~~  291 (708)
                       ..+.++.++|++||..||++||+..
T Consensus       240 ~~~~~~~~~li~~~l~~~P~~R~~~~  265 (305)
T cd05609         240 EALPADAQDLISRLLRQNPLERLGTG  265 (305)
T ss_pred             ccCCHHHHHHHHHHhccChhhccCcc
Confidence             5688999999999999999999853


No 153
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=100.00  E-value=7.9e-41  Score=345.01  Aligned_cols=243  Identities=31%  Similarity=0.524  Sum_probs=207.6

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGE  131 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg~  131 (708)
                      +.||+|+||.||+|.+..+++.||+|.+.... ..+....+.+|+++++.++||||+++++++.....+|+||||+++++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD   79 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence            36899999999999999999999999886432 33445678899999999999999999999999999999999999999


Q ss_pred             hHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcc---ccccC
Q psy2648         132 VFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD---TFCGS  207 (708)
Q Consensus       132 L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~---~~~Gt  207 (708)
                      |.+++...+ .+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....+....   ...++
T Consensus        80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  159 (252)
T cd05084          80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP  159 (252)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence            999997654 58999999999999999999999999999999999999999999999999987543221111   11224


Q ss_pred             CcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHhhhhCCC
Q psy2648         208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYMSTDCENLLKKFLVLNPA  285 (708)
Q Consensus       208 ~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~p~~~s~~~~~Li~~~L~~dP~  285 (708)
                      ..|+|||.+.+..++ .++|||||||++|+|++ |..||...+.......+..+ ....|...+..+.+|+.+||+.||+
T Consensus       160 ~~y~aPE~~~~~~~~-~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  238 (252)
T cd05084         160 VKWTAPEALNYGRYS-SESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPG  238 (252)
T ss_pred             eeecCchhhcCCCCC-hHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChh
Confidence            569999999887764 78999999999999997 99999888777776666554 3355667789999999999999999


Q ss_pred             CCCCHHHHhhh
Q psy2648         286 KRASLEVSGEV  296 (708)
Q Consensus       286 ~Rps~~~~~~~  296 (708)
                      +|||++++.+.
T Consensus       239 ~Rps~~~~~~~  249 (252)
T cd05084         239 QRPSFSTVHQE  249 (252)
T ss_pred             hCcCHHHHHHH
Confidence            99999988753


No 154
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00  E-value=1.1e-40  Score=344.52  Aligned_cols=247  Identities=31%  Similarity=0.582  Sum_probs=219.9

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++.+.||+|+||.||++.+..+++.||||.+..........+.+.+|+++++.++||||++++++++..+..|+||||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            59999999999999999999999999999999976555555566788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccc
Q psy2648         127 ASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDT  203 (708)
Q Consensus       127 ~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~  203 (708)
                      +.+++|.+++....  .+++.++..++.||+.||.|||+++++|+||+|+|||++.++.++|+|||++....... ....
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~  160 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART  160 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence            99999999987643  57899999999999999999999999999999999999999999999999987654322 1234


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHhhhh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR-IPFYMSTDCENLLKKFLVL  282 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~-~p~~~s~~~~~Li~~~L~~  282 (708)
                      ..|++.|+|||++.+..++ .++|+|||||++|+|++|..||...+..+....+..+... .|...+.++.++|.+||+.
T Consensus       161 ~~~~~~~~~pe~~~~~~~~-~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  239 (256)
T cd08218         161 CIGTPYYLSPEICENRPYN-NKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKR  239 (256)
T ss_pred             ccCCccccCHHHhCCCCCC-CccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhhC
Confidence            5688999999999887764 7899999999999999999999988888888888777653 5677899999999999999


Q ss_pred             CCCCCCCHHHHh
Q psy2648         283 NPAKRASLEVSG  294 (708)
Q Consensus       283 dP~~Rps~~~~~  294 (708)
                      ||.+||++++++
T Consensus       240 ~p~~Rp~~~~vl  251 (256)
T cd08218         240 NPRDRPSVNSIL  251 (256)
T ss_pred             ChhhCcCHHHHh
Confidence            999999999876


No 155
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=100.00  E-value=1e-40  Score=352.08  Aligned_cols=247  Identities=26%  Similarity=0.429  Sum_probs=213.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEc-----CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHV-----PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~-----~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  120 (708)
                      .+|.+.+.||+|+||+||++.+.     .++..||+|.+...  .....+.+.+|+.+|+.++||||+++++++.....+
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   82 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence            46999999999999999999863     34567999988653  234456788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEE
Q psy2648         121 YLVMEYASGGEVFDYLVLHG-------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIA  187 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~-------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~  187 (708)
                      |+||||+++++|.+++...+             .+++..+..++.||+.||+|||++||+||||||+|||+++++.+||+
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~  162 (288)
T cd05093          83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIG  162 (288)
T ss_pred             EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEec
Confidence            99999999999999997654             38999999999999999999999999999999999999999999999


Q ss_pred             eccCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC-
Q psy2648         188 DFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKY-  262 (708)
Q Consensus       188 DFGls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~-  262 (708)
                      |||+++.......   .....+++.|+|||++.+..++ .++|||||||++|+|++ |..||...+..++...+..+.. 
T Consensus       163 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~  241 (288)
T cd05093         163 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFT-TESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL  241 (288)
T ss_pred             cCCccccccCCceeecCCCCCccccccCHHHhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcC
Confidence            9999875532211   1233457789999999877664 79999999999999998 9999999888888888888764 


Q ss_pred             CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHhh
Q psy2648         263 RIPFYMSTDCENLLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       263 ~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      ..+...+.++.+||.+||+.||.+|||++++..
T Consensus       242 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         242 QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            456678899999999999999999999998863


No 156
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00  E-value=1.3e-40  Score=344.50  Aligned_cols=246  Identities=29%  Similarity=0.478  Sum_probs=213.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++.....  ...+.+.+|+.+++.++||||+++++++.....+|++||
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e   80 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG--DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME   80 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch--hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence            579999999999999999999999999999999976532  245678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccc
Q psy2648         126 YASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDT  203 (708)
Q Consensus       126 y~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~  203 (708)
                      |+++++|.+++... ..+++.++..++.||+.||.|||+++|+|+||||+||+++.++.+||+|||++....... ....
T Consensus        81 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  160 (262)
T cd06613          81 YCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKS  160 (262)
T ss_pred             CCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhcccc
Confidence            99999999998776 789999999999999999999999999999999999999999999999999987654322 3345


Q ss_pred             cccCCcccccccccCC---ccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC-----CCCCCHHHHHH
Q psy2648         204 FCGSPPYAAPELFQGK---KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI-----PFYMSTDCENL  275 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~---~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~-----p~~~s~~~~~L  275 (708)
                      ..++..|+|||++.+.   .++ .++|||||||++|+|++|..||.+.+..+....+....+..     +...+.++.++
T Consensus       161 ~~~~~~y~~Pe~~~~~~~~~~~-~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  239 (262)
T cd06613         161 FIGTPYWMAPEVAAVERKGGYD-GKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDF  239 (262)
T ss_pred             ccCCccccCchhhcccccCCcC-chhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHH
Confidence            6789999999999766   554 78999999999999999999998877665555554443322     23456789999


Q ss_pred             HHHhhhhCCCCCCCHHHHh
Q psy2648         276 LKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       276 i~~~L~~dP~~Rps~~~~~  294 (708)
                      |.+||..||.+|||++++.
T Consensus       240 i~~~l~~~p~~Rpt~~~il  258 (262)
T cd06613         240 IKKCLTKDPKKRPTATKLL  258 (262)
T ss_pred             HHHHcCCChhhCCCHHHHh
Confidence            9999999999999999875


No 157
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00  E-value=1.2e-40  Score=346.49  Aligned_cols=246  Identities=26%  Similarity=0.435  Sum_probs=215.0

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ...|.+.+.||+|+||.||+|.+..+++.||+|++.+..   .....+.+|+++++.++||||+++++++..+..+|+||
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   81 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence            346999999999999999999999999999999987542   23456889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc-
Q psy2648         125 EYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-  201 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~-  201 (708)
                      ||+++++|.+++....  .+++..++.++.|++.||+|||++||+||||||+|||+++++.+||+|||++......... 
T Consensus        82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~  161 (263)
T cd05052          82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  161 (263)
T ss_pred             EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence            9999999999997643  5889999999999999999999999999999999999999999999999998765433211 


Q ss_pred             -cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHH
Q psy2648         202 -DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYMSTDCENLLKK  278 (708)
Q Consensus       202 -~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~p~~~s~~~~~Li~~  278 (708)
                       ....+++.|+|||.+.+..++ .++|||||||++|+|++ |..||.+.+..++...+..+ ....|...+.++.++|.+
T Consensus       162 ~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  240 (263)
T cd05052         162 HAGAKFPIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRA  240 (263)
T ss_pred             cCCCCCccccCCHHHhccCCCC-chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Confidence             122345679999999888764 78999999999999998 99999998888888887765 345667788999999999


Q ss_pred             hhhhCCCCCCCHHHHh
Q psy2648         279 FLVLNPAKRASLEVSG  294 (708)
Q Consensus       279 ~L~~dP~~Rps~~~~~  294 (708)
                      ||..||++||+++++.
T Consensus       241 cl~~~p~~Rp~~~~l~  256 (263)
T cd05052         241 CWQWNPSDRPSFAEIH  256 (263)
T ss_pred             HccCCcccCCCHHHHH
Confidence            9999999999999876


No 158
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00  E-value=1.3e-40  Score=344.51  Aligned_cols=244  Identities=27%  Similarity=0.482  Sum_probs=211.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ..|++.+.||+|+||.||++.+.. +..||+|.+.+....   ...+.+|+.+|+.++||||+++++++.....+|+|||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e   79 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE   79 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence            469999999999999999998754 567999998754432   3467889999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc--c
Q psy2648         126 YASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL--D  202 (708)
Q Consensus       126 y~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~--~  202 (708)
                      |+++|+|.+++... +.+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++........  .
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~  159 (256)
T cd05114          80 FMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS  159 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence            99999999998754 56899999999999999999999999999999999999999999999999998765332221  1


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHhh
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCENLLKKFL  280 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~-~~p~~~s~~~~~Li~~~L  280 (708)
                      ...++..|+|||++.+..+. .++|||||||++|+|++ |+.||...+..++...+..+.. ..|...+.++.++|.+||
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~-~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~  238 (256)
T cd05114         160 GAKFPVKWSPPEVFNFSKYS-SKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCW  238 (256)
T ss_pred             CCCCchhhCChhhcccCccc-hhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHc
Confidence            22345679999999877764 79999999999999999 9999999988888888887643 346667889999999999


Q ss_pred             hhCCCCCCCHHHHh
Q psy2648         281 VLNPAKRASLEVSG  294 (708)
Q Consensus       281 ~~dP~~Rps~~~~~  294 (708)
                      ..||++||+++++.
T Consensus       239 ~~~p~~Rps~~~l~  252 (256)
T cd05114         239 HEKPEGRPTFAELL  252 (256)
T ss_pred             cCCcccCcCHHHHH
Confidence            99999999999875


No 159
>KOG4236|consensus
Probab=100.00  E-value=1.1e-42  Score=369.92  Aligned_cols=247  Identities=33%  Similarity=0.610  Sum_probs=222.1

Q ss_pred             CeEEE--eEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          47 KYKLL--KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        47 ~Y~i~--~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      -|+|.  ++||+|.||.||-|.|+.+|+.||||+|+|.++..+....+..|+.||+++.||.||.|-..|++.+.+++||
T Consensus       563 vYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVM  642 (888)
T KOG4236|consen  563 VYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVM  642 (888)
T ss_pred             HHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEe
Confidence            47765  7999999999999999999999999999998887666677889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCC---CcEEEEeccCccccCCCC
Q psy2648         125 EYASGGEVFDYLVL--HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       125 Ey~~gg~L~~~i~~--~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~---~~iKL~DFGls~~~~~~~  199 (708)
                      |-+. ||..++|..  .++++|...++++.||+.||.|||-++|+|+|||||||||...   -++||||||+++.+...+
T Consensus       643 EKl~-GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks  721 (888)
T KOG4236|consen  643 EKLH-GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS  721 (888)
T ss_pred             hhhc-chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence            9995 587787754  5899999999999999999999999999999999999999754   369999999999988777


Q ss_pred             CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHH
Q psy2648         200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENL  275 (708)
Q Consensus       200 ~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~----~~s~~~~~L  275 (708)
                      .-.+..|||.|+|||+++.+.|. ..-|+||.|||+|.-+.|.+||...  +++..+|....+-+|.    .+++++.||
T Consensus       722 FRrsVVGTPAYLaPEVLrnkGyN-rSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMyPp~PW~eis~~Aidl  798 (888)
T KOG4236|consen  722 FRRSVVGTPAYLAPEVLRNKGYN-RSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMYPPNPWSEISPEAIDL  798 (888)
T ss_pred             hhhhhcCCccccCHHHHhhcccc-ccccceeeeEEEEEEecccccCCCc--cchhHHhhccccccCCCchhhcCHHHHHH
Confidence            77889999999999999999985 7889999999999999999999653  4567788888777664    478999999


Q ss_pred             HHHhhhhCCCCCCCHHHHh---hhh
Q psy2648         276 LKKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       276 i~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                      |..+|++.=.+|.|++..+   |++
T Consensus       799 In~LLqVkm~kRysvdk~lsh~Wlq  823 (888)
T KOG4236|consen  799 INNLLQVKMRKRYSVDKSLSHPWLQ  823 (888)
T ss_pred             HHHHHHHHHHHhcchHhhccchhhh
Confidence            9999999999999999766   665


No 160
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00  E-value=1e-40  Score=347.84  Aligned_cols=246  Identities=26%  Similarity=0.436  Sum_probs=209.5

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCc--EEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC------CE
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGK--EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE------KT  119 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~--~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------~~  119 (708)
                      |.+.+.||+|+||.||+|+...++.  .||||.++.........+.+.+|+++|+.++||||+++++++...      ..
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            3567899999999999999887775  699999876655556667888999999999999999999976432      25


Q ss_pred             EEEEEeccCCCChHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcc
Q psy2648         120 LYLVMEYASGGEVFDYLVLH------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN  193 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~  193 (708)
                      .++||||+++|+|.+++...      ..+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  160 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK  160 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence            79999999999999987532      247899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCC
Q psy2648         194 EFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKY-RIPFYM  268 (708)
Q Consensus       194 ~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~-~~p~~~  268 (708)
                      .......   .....+++.|+|||++.+..+ ++++|||||||++|+|++ |..||.+....++...+..+.. ..+...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  239 (272)
T cd05075         161 KIYNGDYYRQGRIAKMPVKWIAIESLADRVY-TTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDC  239 (272)
T ss_pred             ccCcccceecCCcccCCcccCCHHHccCCCc-ChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Confidence            6543321   123346778999999988776 479999999999999999 8999998888888888877653 456677


Q ss_pred             CHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         269 STDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       269 s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +.++.++|.+||+.||++|||++++.
T Consensus       240 ~~~~~~li~~~l~~~p~~Rps~~~l~  265 (272)
T cd05075         240 LDGLYSLMSSCWLLNPKDRPSFETLR  265 (272)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHH
Confidence            88999999999999999999999876


No 161
>KOG0658|consensus
Probab=100.00  E-value=9.5e-42  Score=353.81  Aligned_cols=241  Identities=32%  Similarity=0.495  Sum_probs=204.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--C---EEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE--K---TLY  121 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~---~~y  121 (708)
                      .|.-.+.+|.|+||.||.|....+++.||||..-.+..      ---+|++||+.++|||||+|..+|...  .   ...
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln   98 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN   98 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence            68999999999999999999999999999998754432      123799999999999999999888643  2   356


Q ss_pred             EEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCC-CcEEEEeccCccccC
Q psy2648         122 LVMEYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE-MNIKIADFGFSNEFT  196 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~-~~iKL~DFGls~~~~  196 (708)
                      +||||++. +|+++++.    +.+++.-+++.|..||++||.|||+.||+||||||.|||+|.+ |.+||||||.|+...
T Consensus        99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~  177 (364)
T KOG0658|consen   99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV  177 (364)
T ss_pred             HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence            89999975 89988874    5689999999999999999999999999999999999999987 899999999999998


Q ss_pred             CCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc--------------C--
Q psy2648         197 PGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR--------------G--  260 (708)
Q Consensus       197 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~--------------~--  260 (708)
                      .++...+...|..|.|||++.|....+.+.||||.|||+.||+-|++-|.|.+..+-...|.+              .  
T Consensus       178 ~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y  257 (364)
T KOG0658|consen  178 KGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNY  257 (364)
T ss_pred             cCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccc
Confidence            888778888999999999999876667899999999999999999999999765433222211              0  


Q ss_pred             -CCCCC------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         261 -KYRIP------------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       261 -~~~~p------------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                       ...+|            ...++|+.+|+.++|.++|.+|.+.-+++
T Consensus       258 ~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l  304 (364)
T KOG0658|consen  258 TEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEAL  304 (364)
T ss_pred             ccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence             11112            24688999999999999999999998776


No 162
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00  E-value=8.4e-41  Score=359.84  Aligned_cols=247  Identities=23%  Similarity=0.388  Sum_probs=203.1

Q ss_pred             EEeEEccc--CceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Q psy2648          50 LLKTIGKG--NFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYA  127 (708)
Q Consensus        50 i~~~LG~G--~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~  127 (708)
                      ++++||+|  +|++||++.++.+|+.||||+++.........+.+.+|+++++.++|||||++++++..++.+|+||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            56789999  7899999999999999999999876554455566778999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC-CC-----
Q psy2648         128 SGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GN-----  199 (708)
Q Consensus       128 ~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~-~~-----  199 (708)
                      ++|+|.+++..+  ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.++++||+.+..... +.     
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVV  161 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccccc
Confidence            999999998654  4589999999999999999999999999999999999999999999999986543221 11     


Q ss_pred             --CccccccCCcccccccccCC--ccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC------------
Q psy2648         200 --KLDTFCGSPPYAAPELFQGK--KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR------------  263 (708)
Q Consensus       200 --~~~~~~Gt~~Y~APE~l~~~--~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~------------  263 (708)
                        ......++..|+|||++.+.  .| +.++|||||||++|+|++|..||..............+...            
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (327)
T cd08227         162 HDFPKYSVKVLPWLSPEVLQQNLQGY-DAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE  240 (327)
T ss_pred             ccccccccceecccChHHhhcccCCC-CchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhh
Confidence              11234577889999999763  35 47899999999999999999999876554433333322111            


Q ss_pred             ----------------------------------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhh
Q psy2648         264 ----------------------------------IPFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       264 ----------------------------------~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                                                        .....++++.+||.+||+.||++|||++++.   |+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~  311 (327)
T cd08227         241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK  311 (327)
T ss_pred             cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhh
Confidence                                              0112467899999999999999999999987   654


No 163
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00  E-value=9.7e-41  Score=357.43  Aligned_cols=246  Identities=25%  Similarity=0.448  Sum_probs=209.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcE----EEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKE----VAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~----vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~y  121 (708)
                      .+|++.+.||+|+||.||+|.+..+++.    ||||++.... .....+.+.+|+.+++.++||||+++++++... ..+
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~   84 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ   84 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence            4699999999999999999998776664    8999986432 334456788999999999999999999998764 578


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q psy2648         122 LVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK  200 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~  200 (708)
                      +|+||+++|+|.+++..+ ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus        85 ~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  164 (316)
T cd05108          85 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK  164 (316)
T ss_pred             eeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCc
Confidence            999999999999999875 4688999999999999999999999999999999999999999999999999987653332


Q ss_pred             c---cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHH
Q psy2648         201 L---DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENL  275 (708)
Q Consensus       201 ~---~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~L  275 (708)
                      .   ....++..|+|||++.+..++ .++|||||||++|+|++ |..||.+....++.+.+..+. ...|...+.++.++
T Consensus       165 ~~~~~~~~~~~~y~apE~~~~~~~~-~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  243 (316)
T cd05108         165 EYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI  243 (316)
T ss_pred             ceeccCCccceeecChHHhccCCCC-chhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHH
Confidence            2   223346789999999887775 79999999999999998 999999988877766555443 23456678899999


Q ss_pred             HHHhhhhCCCCCCCHHHHh
Q psy2648         276 LKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       276 i~~~L~~dP~~Rps~~~~~  294 (708)
                      |.+||..||.+||++.++.
T Consensus       244 i~~cl~~~p~~Rps~~~l~  262 (316)
T cd05108         244 MVKCWMIDADSRPKFRELI  262 (316)
T ss_pred             HHHHccCChhhCcCHHHHH
Confidence            9999999999999999887


No 164
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00  E-value=1.8e-40  Score=347.82  Aligned_cols=248  Identities=22%  Similarity=0.354  Sum_probs=210.4

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEc-----CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHV-----PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT  119 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~-----~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  119 (708)
                      .++|++.+.||+|+||.||+|.+.     .+++.||||++.... .......+.+|+.+++.++||||+++++++.....
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            457999999999999999999875     345789999986532 22344568899999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEec
Q psy2648         120 LYLVMEYASGGEVFDYLVLHG----------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADF  189 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~----------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DF  189 (708)
                      .|+||||+++++|.+++....          .++...+..++.||+.||+|||+.+++||||||+|||++.++.+||+||
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~df  163 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF  163 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCC
Confidence            999999999999999987532          2467788899999999999999999999999999999999999999999


Q ss_pred             cCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC-CC
Q psy2648         190 GFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKY-RI  264 (708)
Q Consensus       190 Gls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~-~~  264 (708)
                      |+++.......   .....+++.|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..++...+..+.. ..
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~  242 (277)
T cd05062         164 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDK  242 (277)
T ss_pred             CCccccCCcceeecCCCCccCHhhcChhHhhcCCcC-chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCC
Confidence            99875432211   1123557789999999877764 78999999999999999 7999999888888877766543 45


Q ss_pred             CCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         265 PFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       265 p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      |...+..+.++|.+||+.||++|||+.++.
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l  272 (277)
T cd05062         243 PDNCPDMLFELMRMCWQYNPKMRPSFLEII  272 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            667888999999999999999999999875


No 165
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00  E-value=1.7e-40  Score=345.16  Aligned_cols=246  Identities=25%  Similarity=0.409  Sum_probs=210.6

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC----hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN----PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYL  122 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~----~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~yl  122 (708)
                      +|++.+.||+|+||.||+|.. .+++.||||.+......    ......+.+|+++++.++||||+++++++.+...+|+
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence            588999999999999999986 57899999998754322    2234567899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC-----
Q psy2648         123 VMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-----  197 (708)
Q Consensus       123 VmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~-----  197 (708)
                      ||||+++++|.+++...+.+++..+..++.||+.||+|||+.+|+|+||||+||+++.++.+||+|||++.....     
T Consensus        80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  159 (265)
T cd06631          80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG  159 (265)
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc
Confidence            999999999999998888899999999999999999999999999999999999999999999999999875421     


Q ss_pred             --CCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHH
Q psy2648         198 --GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG---KYRIPFYMSTDC  272 (708)
Q Consensus       198 --~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~---~~~~p~~~s~~~  272 (708)
                        ........|++.|+|||++.+..++ .++|||||||++|+|++|..||...+..+....+...   ....|...+.++
T Consensus       160 ~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (265)
T cd06631         160 THSNMLKSMHGTPYWMAPEVINESGYG-RKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAA  238 (265)
T ss_pred             cccccccccCCCccccChhhhcCCCCc-chhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHH
Confidence              1122345789999999999887764 7899999999999999999999876654443333333   124566788999


Q ss_pred             HHHHHHhhhhCCCCCCCHHHHh
Q psy2648         273 ENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       273 ~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .++|++||..||.+||+++++.
T Consensus       239 ~~~i~~~l~~~p~~Rp~~~~~l  260 (265)
T cd06631         239 IDFVTSCLTRDQHERPSALQLL  260 (265)
T ss_pred             HHHHHHHhcCCcccCCCHHHHh
Confidence            9999999999999999999876


No 166
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00  E-value=2e-40  Score=350.29  Aligned_cols=246  Identities=30%  Similarity=0.488  Sum_probs=211.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      +.|++++.||+|+||.||+|++..+++.||+|++...  .....+.+.+|+.+++.++||||+++++++..+..+|+|||
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE   89 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence            5699999999999999999999999999999998754  34456778899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCccc
Q psy2648         126 YASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDT  203 (708)
Q Consensus       126 y~~gg~L~~~i~~-~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~~  203 (708)
                      |+++++|..++.. ...+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||++...... .....
T Consensus        90 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~  169 (292)
T cd06644          90 FCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDS  169 (292)
T ss_pred             cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccce
Confidence            9999999888765 356899999999999999999999999999999999999999999999999998654322 22345


Q ss_pred             cccCCcccccccccCC-----ccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHH
Q psy2648         204 FCGSPPYAAPELFQGK-----KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---RIPFYMSTDCENL  275 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~-----~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~---~~p~~~s~~~~~L  275 (708)
                      ..+++.|+|||++.+.     .+ +.++|||||||++|+|++|..||...+..+...++.....   ..|...+.++.++
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  248 (292)
T cd06644         170 FIGTPYWMAPEVVMCETMKDTPY-DYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDF  248 (292)
T ss_pred             ecCCccccCceeeccccccCCCC-CchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHH
Confidence            6788999999998532     23 3689999999999999999999988776666655554432   2345678899999


Q ss_pred             HHHhhhhCCCCCCCHHHHh
Q psy2648         276 LKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       276 i~~~L~~dP~~Rps~~~~~  294 (708)
                      |.+||..||++||+++++.
T Consensus       249 i~~~l~~~p~~Rp~~~~il  267 (292)
T cd06644         249 LKTALDKHPETRPSAAQLL  267 (292)
T ss_pred             HHHHhcCCcccCcCHHHHh
Confidence            9999999999999999876


No 167
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00  E-value=2.3e-40  Score=347.88  Aligned_cols=241  Identities=24%  Similarity=0.422  Sum_probs=205.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++.+.||+|+||.||+|.+..+++.||||++.+.. .....+.+.+|++++++++||||+++++.+...+..++||||
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            6889999999999999999999999999999997643 334456788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcccccc
Q psy2648         127 ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCG  206 (708)
Q Consensus       127 ~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~~G  206 (708)
                      +++++|..+    ..+++..+..++.||+.||+|||++||+|+||||+|||++.++.+||+|||++...... .....+|
T Consensus        81 ~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-~~~~~~~  155 (279)
T cd06619          81 MDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-IAKTYVG  155 (279)
T ss_pred             CCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-cccCCCC
Confidence            999998654    36789999999999999999999999999999999999999999999999998765432 3345689


Q ss_pred             CCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCC-------HHHHHHHHHcCC-CCCC-CCCCHHHHHHHH
Q psy2648         207 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST-------LRELRERVLRGK-YRIP-FYMSTDCENLLK  277 (708)
Q Consensus       207 t~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~-------~~~l~~~i~~~~-~~~p-~~~s~~~~~Li~  277 (708)
                      ++.|+|||++.+..++ .++|||||||++|+|++|..||....       ..+..+.+.... ...| ...++++.++|.
T Consensus       156 ~~~y~aPE~~~~~~~~-~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  234 (279)
T cd06619         156 TNAYMAPERISGEQYG-IHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFIT  234 (279)
T ss_pred             ChhhcCceeecCCCCC-CcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHH
Confidence            9999999999887764 79999999999999999999996532       122333333222 2222 346789999999


Q ss_pred             HhhhhCCCCCCCHHHHh
Q psy2648         278 KFLVLNPAKRASLEVSG  294 (708)
Q Consensus       278 ~~L~~dP~~Rps~~~~~  294 (708)
                      +||+.||++||+++++.
T Consensus       235 ~~l~~~P~~Rp~~~eil  251 (279)
T cd06619         235 QCMRKQPKERPAPENLM  251 (279)
T ss_pred             HHhhCChhhCCCHHHHh
Confidence            99999999999999876


No 168
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00  E-value=2.7e-40  Score=343.88  Aligned_cols=247  Identities=29%  Similarity=0.492  Sum_probs=210.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC---ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--CEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL---NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE--KTL  120 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~  120 (708)
                      .+|++.+.||+|+||.||+|.+..+++.||||.+.....   .....+.+.+|+++++.++||||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            369999999999999999999999999999999864322   123456788999999999999999999998763  568


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC--
Q psy2648         121 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG--  198 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~--  198 (708)
                      |+||||+++++|.+++...+.+++..+..++.||+.||+|||+++|+|+||||+|||++.++.+||+|||++......  
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~  161 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL  161 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence            999999999999999988888999999999999999999999999999999999999999999999999998754321  


Q ss_pred             --CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHH
Q psy2648         199 --NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK--YRIPFYMSTDCEN  274 (708)
Q Consensus       199 --~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~--~~~p~~~s~~~~~  274 (708)
                        ......+|+..|+|||++.+..+ +.++|||||||++|+|++|+.||...+.......+....  ...|...+..+.+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (265)
T cd06652         162 SGTGMKSVTGTPYWMSPEVISGEGY-GRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRD  240 (265)
T ss_pred             cccccccCCCCccccChhhhcCCCC-CcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHH
Confidence              12344678999999999988776 478999999999999999999998765554444444332  2356667889999


Q ss_pred             HHHHhhhhCCCCCCCHHHHh
Q psy2648         275 LLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +|++||. +|++||+++++.
T Consensus       241 ~i~~~l~-~p~~Rp~~~~il  259 (265)
T cd06652         241 FLKRIFV-EAKLRPSADELL  259 (265)
T ss_pred             HHHHHhc-ChhhCCCHHHHh
Confidence            9999995 999999999876


No 169
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00  E-value=8.7e-41  Score=350.46  Aligned_cols=246  Identities=31%  Similarity=0.513  Sum_probs=214.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++|++++.||+|+||.||+|.+..+++.||+|++...  .....+.+.+|+.+++.++||||+++++++..+..+|+|||
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            4699999999999999999999999999999998643  33455678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCccc
Q psy2648         126 YASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDT  203 (708)
Q Consensus       126 y~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~~  203 (708)
                      |+++++|.+++... ..+++.+++.++.||+.||.|||+++|+||||||+||+++.++.+||+|||++...... .....
T Consensus        83 ~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~  162 (280)
T cd06611          83 FCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDT  162 (280)
T ss_pred             ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccce
Confidence            99999999998764 46999999999999999999999999999999999999999999999999988654322 22334


Q ss_pred             cccCCcccccccccCC-----ccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHH
Q psy2648         204 FCGSPPYAAPELFQGK-----KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---RIPFYMSTDCENL  275 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~-----~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~---~~p~~~s~~~~~L  275 (708)
                      ..|++.|+|||++...     .+ +.++|||||||++|+|++|..||.+.+..+....+..+..   ..|...+.++.+|
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~~-~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  241 (280)
T cd06611         163 FIGTPYWMAPEVVACETFKDNPY-DYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDF  241 (280)
T ss_pred             eecchhhcCHHHHhhcccCCCCC-CccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHH
Confidence            6789999999998532     23 3689999999999999999999998887777777776643   2355678999999


Q ss_pred             HHHhhhhCCCCCCCHHHHh
Q psy2648         276 LKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       276 i~~~L~~dP~~Rps~~~~~  294 (708)
                      |.+||..||.+||++++++
T Consensus       242 i~~~l~~~p~~Rps~~~il  260 (280)
T cd06611         242 LKSCLVKDPDDRPTAAELL  260 (280)
T ss_pred             HHHHhccChhhCcCHHHHh
Confidence            9999999999999999887


No 170
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=100.00  E-value=1.9e-40  Score=346.69  Aligned_cols=248  Identities=24%  Similarity=0.394  Sum_probs=213.8

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCC-----CcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPT-----GKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT  119 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~t-----g~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  119 (708)
                      .++|++.+.||+|+||.||+|.+...     +..||||.+.... .......+.+|+.+|+.++||||+++++++.....
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   83 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP   83 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence            45799999999999999999998654     4889999986443 23344568899999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEec
Q psy2648         120 LYLVMEYASGGEVFDYLVLHG----------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADF  189 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~----------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DF  189 (708)
                      .|+||||+++|+|.+++....          .+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+||
T Consensus        84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~df  163 (277)
T cd05032          84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDF  163 (277)
T ss_pred             cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCc
Confidence            999999999999999986532          3677889999999999999999999999999999999999999999999


Q ss_pred             cCccccCCCC---CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCC
Q psy2648         190 GFSNEFTPGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRI  264 (708)
Q Consensus       190 Gls~~~~~~~---~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~  264 (708)
                      |+++......   ......++..|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+..++.+.+..+. ...
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~  242 (277)
T cd05032         164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVF-TTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDL  242 (277)
T ss_pred             ccchhhccCcccccCCCCCccccccCHHHHhcCCC-CcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCC
Confidence            9987553322   2234567789999999987766 478999999999999998 999999988888887777553 456


Q ss_pred             CCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         265 PFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       265 p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      |...+.++.++|.+||+.||++|||++++.
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~  272 (277)
T cd05032         243 PENCPDKLLELMRMCWQYNPKMRPTFLEIV  272 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence            777899999999999999999999999876


No 171
>KOG0667|consensus
Probab=100.00  E-value=4.2e-41  Score=371.38  Aligned_cols=245  Identities=33%  Similarity=0.467  Sum_probs=207.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-C-----CCeeeEEEEEEeCCE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-H-----PNIVKLFQVIETEKT  119 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-H-----pnIv~l~~~~~~~~~  119 (708)
                      .+|.|++.||+|+||+|-+|.+..|++.||||+|+..   +....+...|+.||..|+ |     -|||+++++|...++
T Consensus       186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H  262 (586)
T KOG0667|consen  186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH  262 (586)
T ss_pred             EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence            3899999999999999999999999999999999754   344566778999999997 4     389999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCC--cEEEEeccCcccc
Q psy2648         120 LYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM--NIKIADFGFSNEF  195 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~--~iKL~DFGls~~~  195 (708)
                      +|||+|.++ -+|+++|+.+.  .++...++.+..||+.||.+||+.+|||+|||||||||.+.+  .|||+|||.|...
T Consensus       263 lciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~  341 (586)
T KOG0667|consen  263 LCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE  341 (586)
T ss_pred             eeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence            999999996 49999998874  588999999999999999999999999999999999997654  6999999999765


Q ss_pred             CCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc----------------
Q psy2648         196 TPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR----------------  259 (708)
Q Consensus       196 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~----------------  259 (708)
                      ..  ...+.+-|..|.|||+|.|.+|+ .+.||||||||+.||++|.+-|.|.+..+.+..|..                
T Consensus       342 ~q--~vytYiQSRfYRAPEVILGlpY~-~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~  418 (586)
T KOG0667|consen  342 SQ--RVYTYIQSRFYRAPEVILGLPYD-TAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKA  418 (586)
T ss_pred             CC--cceeeeeccccccchhhccCCCC-CccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhcccc
Confidence            43  34488899999999999999996 799999999999999999999999876554444421                


Q ss_pred             ------------------------------------CCCCCCC-----------CCCHHHHHHHHHhhhhCCCCCCCHHH
Q psy2648         260 ------------------------------------GKYRIPF-----------YMSTDCENLLKKFLVLNPAKRASLEV  292 (708)
Q Consensus       260 ------------------------------------~~~~~p~-----------~~s~~~~~Li~~~L~~dP~~Rps~~~  292 (708)
                                                          ++...|.           .....+.|||++||++||.+|+|..+
T Consensus       419 ~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~q  498 (586)
T KOG0667|consen  419 HKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQ  498 (586)
T ss_pred             ceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHH
Confidence                                                1111221           01124689999999999999999998


Q ss_pred             Hh---hhh
Q psy2648         293 SG---EVT  297 (708)
Q Consensus       293 ~~---~~~  297 (708)
                      ++   |+.
T Consensus       499 al~Hpfl~  506 (586)
T KOG0667|consen  499 ALNHPFLT  506 (586)
T ss_pred             HhcCcccc
Confidence            87   664


No 172
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=2e-40  Score=366.48  Aligned_cols=244  Identities=26%  Similarity=0.431  Sum_probs=202.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEc--CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHV--PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~--~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      .+|++++.||+|+||.||+|...  .+++.||||.+....       ...+|+++|+.++|||||++++++.....+|+|
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv  164 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------TPGREIDILKTISHRAIINLIHAYRWKSTVCMV  164 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------cHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence            46999999999999999999754  466889999886432       245799999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC---C
Q psy2648         124 MEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN---K  200 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~---~  200 (708)
                      ||++. ++|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......   .
T Consensus       165 ~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~  243 (392)
T PHA03207        165 MPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ  243 (392)
T ss_pred             ehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence            99996 6899999777889999999999999999999999999999999999999999999999999987654322   1


Q ss_pred             ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCH----HHHHH---HHHcC-------------
Q psy2648         201 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTL----RELRE---RVLRG-------------  260 (708)
Q Consensus       201 ~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~----~~l~~---~i~~~-------------  260 (708)
                      .....||+.|+|||++.+..|+ .++|||||||+||+|++|..||.+...    ..+..   .+...             
T Consensus       244 ~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~  322 (392)
T PHA03207        244 CYGWSGTLETNSPELLALDPYC-AKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLC  322 (392)
T ss_pred             ccccccccCccCHhHhcCCCCC-chhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHH
Confidence            2346799999999999988875 789999999999999999999976432    11111   11000             


Q ss_pred             ------------CCCCC-----CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         261 ------------KYRIP-----FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       261 ------------~~~~p-----~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                                  .+..|     ...+.++.+||++||..||++|||+++++   |+..
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~  380 (392)
T PHA03207        323 KHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTK  380 (392)
T ss_pred             HHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence                        01111     12466889999999999999999999987   7654


No 173
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=100.00  E-value=3.2e-40  Score=350.32  Aligned_cols=250  Identities=30%  Similarity=0.521  Sum_probs=213.5

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ..+|++.+.||+|+||.||+|.+..+++.||||.+......  ..+.+.+|+.+++.++||||+++++.+.....+|+||
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~   96 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence            46899999999999999999999999999999999765432  3456889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDT  203 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~  203 (708)
                      ||+++++|.+++. ...+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... ....
T Consensus        97 e~~~~~~L~~~~~-~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~  175 (296)
T cd06654          97 EYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST  175 (296)
T ss_pred             cccCCCCHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCc
Confidence            9999999999885 4568999999999999999999999999999999999999999999999999987654322 2234


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-cCCC--CCCCCCCHHHHHHHHHhh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVL-RGKY--RIPFYMSTDCENLLKKFL  280 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~-~~~~--~~p~~~s~~~~~Li~~~L  280 (708)
                      ..|++.|+|||.+.+..++ .++|||||||++|+|++|+.||...+.......+. .+..  ..|...+..+.+||.+||
T Consensus       176 ~~~~~~y~aPE~~~~~~~~-~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  254 (296)
T cd06654         176 MVGTPYWMAPEVVTRKAYG-PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL  254 (296)
T ss_pred             ccCCccccCHHHHcCCCCC-ccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHC
Confidence            5789999999999877664 79999999999999999999998876544332232 2222  235567889999999999


Q ss_pred             hhCCCCCCCHHHHh---hhhh
Q psy2648         281 VLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       281 ~~dP~~Rps~~~~~---~~~~  298 (708)
                      ..||++||+++++.   |+..
T Consensus       255 ~~~p~~Rpt~~eil~~~~~~~  275 (296)
T cd06654         255 DMDVEKRGSAKELLQHQFLKI  275 (296)
T ss_pred             cCCcccCcCHHHHhhChhhhc
Confidence            99999999999887   5543


No 174
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00  E-value=3e-40  Score=343.76  Aligned_cols=248  Identities=24%  Similarity=0.409  Sum_probs=214.2

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCC---CcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPT---GKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~t---g~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~y  121 (708)
                      .++|++.+.||+|+||.||+|.+..+   ...||||++.... .......+.+|+.+++.++||||+++++++...+.+|
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM   81 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence            35799999999999999999998754   4589999987543 3344567889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-C
Q psy2648         122 LVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-N  199 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~  199 (708)
                      +||||+++++|.+++..+ +.+++.++..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++...... .
T Consensus        82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd05033          82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA  161 (266)
T ss_pred             EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccccc
Confidence            999999999999999765 47899999999999999999999999999999999999999999999999999876421 1


Q ss_pred             Cc--cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHH
Q psy2648         200 KL--DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYMSTDCENL  275 (708)
Q Consensus       200 ~~--~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~p~~~s~~~~~L  275 (708)
                      ..  ....+++.|+|||.+.+..++ .++|||||||++|+|++ |..||......++...+..+ ....|...+.++.+|
T Consensus       162 ~~~~~~~~~~~~y~~Pe~~~~~~~~-~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  240 (266)
T cd05033         162 TYTTKGGKIPIRWTAPEAIAYRKFT-SASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQL  240 (266)
T ss_pred             ceeccCCCCCccccChhhhccCCCc-cccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence            11  123446789999999887764 78999999999999998 99999988888888888765 234556778999999


Q ss_pred             HHHhhhhCCCCCCCHHHHh
Q psy2648         276 LKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       276 i~~~L~~dP~~Rps~~~~~  294 (708)
                      +.+||+.||++||+++++.
T Consensus       241 i~~cl~~~p~~Rp~~~ei~  259 (266)
T cd05033         241 MLDCWQKDRNERPTFSQIV  259 (266)
T ss_pred             HHHHcCCCcccCcCHHHHH
Confidence            9999999999999999876


No 175
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00  E-value=2.3e-40  Score=347.36  Aligned_cols=247  Identities=33%  Similarity=0.504  Sum_probs=210.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++.+.||+|+||.||+|.+..+++.||||++..........+.+.+|+.+++.++||||+++++++.....+|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            59999999999999999999999999999999987655445556788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC--Cccc
Q psy2648         127 ASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--KLDT  203 (708)
Q Consensus       127 ~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~--~~~~  203 (708)
                      + +++|.+++... ..+++.+++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++.......  ....
T Consensus        81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  159 (286)
T cd07832          81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSH  159 (286)
T ss_pred             c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcccc
Confidence            9 99999998654 568999999999999999999999999999999999999999999999999987654332  2344


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-------------------CCCC
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-------------------KYRI  264 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-------------------~~~~  264 (708)
                      ..|+..|+|||++.+....+.++|||||||++|+|++|..||.+.+..+...++...                   ...+
T Consensus       160 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T cd07832         160 QVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITF  239 (286)
T ss_pred             ccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccC
Confidence            678999999999876654468999999999999999999999877655544444321                   0000


Q ss_pred             -----------CCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         265 -----------PFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       265 -----------p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                 ....+.++.+||++||..||.+||+++++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l  280 (286)
T cd07832         240 PESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEAL  280 (286)
T ss_pred             CCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHh
Confidence                       013468899999999999999999999876


No 176
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00  E-value=2.2e-40  Score=343.57  Aligned_cols=246  Identities=26%  Similarity=0.466  Sum_probs=211.2

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      ..++|++++.||+|+||.||+|.+. +++.||+|.+.....   ..+.+.+|+.+++.++||||+++++++...+..|+|
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   79 (261)
T cd05072           4 PRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYII   79 (261)
T ss_pred             chHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch---hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEE
Confidence            4568999999999999999999864 567899999865432   346788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC-
Q psy2648         124 MEYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-  200 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~-  200 (708)
                      |||+++++|.+++...  ..+++..+..++.||+.||+|||+++++||||||+|||++.++.+||+|||++........ 
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~  159 (261)
T cd05072          80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT  159 (261)
T ss_pred             EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence            9999999999998764  4688899999999999999999999999999999999999999999999999976543221 


Q ss_pred             -ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHH
Q psy2648         201 -LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLLK  277 (708)
Q Consensus       201 -~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~  277 (708)
                       .....++..|+|||++.+..++ +++|||||||++|+|++ |..||.+.+..++...+..+. ++.+...+.++.++|.
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  238 (261)
T cd05072         160 AREGAKFPIKWTAPEAINFGSFT-IKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMK  238 (261)
T ss_pred             ccCCCccceecCCHHHhccCCCC-hhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence             1223456789999999877764 78999999999999998 999999888888877776652 2334467889999999


Q ss_pred             HhhhhCCCCCCCHHHHh
Q psy2648         278 KFLVLNPAKRASLEVSG  294 (708)
Q Consensus       278 ~~L~~dP~~Rps~~~~~  294 (708)
                      +||..||++||+++++.
T Consensus       239 ~~l~~~p~~Rp~~~~i~  255 (261)
T cd05072         239 TCWKEKAEERPTFDYLQ  255 (261)
T ss_pred             HHccCCcccCcCHHHHH
Confidence            99999999999999876


No 177
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=2.4e-40  Score=352.77  Aligned_cols=251  Identities=27%  Similarity=0.466  Sum_probs=213.8

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcC-------CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEE
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVP-------TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQV  113 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~-------tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~  113 (708)
                      +...++|.+.+.||+|+||.||+|++..       +...||+|++.... .......+.+|+.+++.+ +||||++++++
T Consensus        14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (307)
T cd05098          14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGA   92 (307)
T ss_pred             eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            4445789999999999999999998753       33579999997643 234456788999999999 79999999999


Q ss_pred             EEeCCEEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEE
Q psy2648         114 IETEKTLYLVMEYASGGEVFDYLVLHG----------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL  177 (708)
Q Consensus       114 ~~~~~~~ylVmEy~~gg~L~~~i~~~~----------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNIL  177 (708)
                      +.....+|+||||+++|+|.+++....                .++..++..++.||+.||+|||++|++||||||+|||
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil  172 (307)
T cd05098          93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL  172 (307)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheE
Confidence            999999999999999999999997642                4788899999999999999999999999999999999


Q ss_pred             EcCCCcEEEEeccCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHH
Q psy2648         178 LDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLREL  253 (708)
Q Consensus       178 ld~~~~iKL~DFGls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l  253 (708)
                      ++.++.+||+|||++........   .....+++.|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..++
T Consensus       173 l~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~el~~~g~~p~~~~~~~~~  251 (307)
T cd05098         173 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL  251 (307)
T ss_pred             EcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCC-cHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence            99999999999999876532211   1122345689999999887764 78999999999999998 9999999888888


Q ss_pred             HHHHHcCC-CCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         254 RERVLRGK-YRIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       254 ~~~i~~~~-~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ...+..+. ...|...+.++.+||.+||..+|.+||+++++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl  293 (307)
T cd05098         252 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV  293 (307)
T ss_pred             HHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence            88777664 356677889999999999999999999999876


No 178
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00  E-value=1.1e-40  Score=356.60  Aligned_cols=239  Identities=26%  Similarity=0.496  Sum_probs=189.2

Q ss_pred             EeEEcccCceEEEEEEEc--CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEe--CCEEEEEEec
Q psy2648          51 LKTIGKGNFAKVKLAKHV--PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIET--EKTLYLVMEY  126 (708)
Q Consensus        51 ~~~LG~G~fg~V~la~~~--~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~ylVmEy  126 (708)
                      .+.||+|+||.||+|+++  .+++.||||.+.....    ...+.+|+++|+.++||||+++++++..  ...+|+||||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY   81 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence            468999999999999976  4778999999975432    2346789999999999999999999854  4578999999


Q ss_pred             cCCCChHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEE----cCCCcEEEEeccCcc
Q psy2648         127 ASGGEVFDYLVLH---------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL----DSEMNIKIADFGFSN  193 (708)
Q Consensus       127 ~~gg~L~~~i~~~---------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILl----d~~~~iKL~DFGls~  193 (708)
                      +.+ +|.+++...         ..+++..++.++.||+.||+|||++||+||||||+|||+    +..+.+||+|||+++
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07868          82 AEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             cCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence            864 888887542         248999999999999999999999999999999999999    456789999999997


Q ss_pred             ccCCC----CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCH---------HHHHHHHHc-
Q psy2648         194 EFTPG----NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTL---------RELRERVLR-  259 (708)
Q Consensus       194 ~~~~~----~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~---------~~l~~~i~~-  259 (708)
                      .+...    ......+||+.|+|||++.+....+.++|||||||++|+|++|..||.....         .....++.. 
T Consensus       161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~  240 (317)
T cd07868         161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV  240 (317)
T ss_pred             ccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHh
Confidence            65422    2334578999999999998755445889999999999999999999975321         011111110 


Q ss_pred             ---------------------------CCCCC----------CCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         260 ---------------------------GKYRI----------PFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       260 ---------------------------~~~~~----------p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                                 ..+..          ....+.++.+||.+||+.||.+|||+++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l  312 (317)
T cd07868         241 MGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM  312 (317)
T ss_pred             cCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHh
Confidence                                       00000          012346789999999999999999999876


No 179
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00  E-value=7e-41  Score=351.73  Aligned_cols=249  Identities=22%  Similarity=0.395  Sum_probs=214.2

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCC-----CcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPT-----GKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK  118 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~t-----g~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~  118 (708)
                      .+.+|++.+.||+|+||.||+|.+..+     ++.||||++.... .....+.+.+|+.+++.++||||+++++++.+..
T Consensus         3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~   81 (283)
T cd05091           3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ   81 (283)
T ss_pred             CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC
Confidence            345688999999999999999987643     5789999997543 2333456789999999999999999999999999


Q ss_pred             EEEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCC
Q psy2648         119 TLYLVMEYASGGEVFDYLVLH----------------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM  182 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~----------------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~  182 (708)
                      ..++++||+.+++|.+++...                ..+++..+..++.||+.||+|||++||+||||||+|||+++++
T Consensus        82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~  161 (283)
T cd05091          82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKL  161 (283)
T ss_pred             ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCC
Confidence            999999999999999998632                3478888999999999999999999999999999999999999


Q ss_pred             cEEEEeccCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy2648         183 NIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVL  258 (708)
Q Consensus       183 ~iKL~DFGls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~  258 (708)
                      .+||+|||+++.......   .....+++.|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..++.+.+.
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~  240 (283)
T cd05091         162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFS-IDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIR  240 (283)
T ss_pred             ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCC-cchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            999999999876543221   2334567889999999877764 78999999999999998 999999998889998888


Q ss_pred             cCCC-CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         259 RGKY-RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       259 ~~~~-~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .+.. ..|...+.++.+|+.+||+.||.+||+++++.
T Consensus       241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~  277 (283)
T cd05091         241 NRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIH  277 (283)
T ss_pred             cCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHH
Confidence            8764 35677889999999999999999999999876


No 180
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00  E-value=1.7e-40  Score=347.12  Aligned_cols=246  Identities=29%  Similarity=0.500  Sum_probs=216.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++|++.+.||.|+||.||+|.+..+++.||+|++.... .......+.+|+++++.++||||+++++++.++..+|+|+|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME   79 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence            47999999999999999999999999999999987653 23345567899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCcccc
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~~~  204 (708)
                      |+++++|.+++... .+++..+..++.||+.||.|||+++|+||||+|+||++++++.++|+|||++...... ......
T Consensus        80 ~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~  158 (274)
T cd06609          80 YCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTF  158 (274)
T ss_pred             eeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccc
Confidence            99999999998755 8999999999999999999999999999999999999999999999999998776433 233456


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-CCCCC-CCHHHHHHHHHhhhh
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIPFY-MSTDCENLLKKFLVL  282 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~-~~p~~-~s~~~~~Li~~~L~~  282 (708)
                      .|++.|+|||++.+..++ .++|||||||++|+|++|..||...+..+....+..+.. .++.. .+.++.++|.+||..
T Consensus       159 ~~~~~y~~PE~~~~~~~~-~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  237 (274)
T cd06609         159 VGTPFWMAPEVIKQSGYD-EKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNK  237 (274)
T ss_pred             cCCccccChhhhccCCCC-chhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhC
Confidence            789999999999887764 799999999999999999999988776666666665533 33444 788999999999999


Q ss_pred             CCCCCCCHHHHh
Q psy2648         283 NPAKRASLEVSG  294 (708)
Q Consensus       283 dP~~Rps~~~~~  294 (708)
                      ||++||+++++.
T Consensus       238 ~p~~Rpt~~~il  249 (274)
T cd06609         238 DPKERPSAKELL  249 (274)
T ss_pred             ChhhCcCHHHHh
Confidence            999999999886


No 181
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00  E-value=2.7e-40  Score=352.44  Aligned_cols=255  Identities=29%  Similarity=0.455  Sum_probs=211.5

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--CEEE
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE--KTLY  121 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~y  121 (708)
                      .+++|++.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.++++++||||+++++++...  +.+|
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF   84 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence            46789999999999999999999999999999999975543333333466899999999999999999998765  5689


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-
Q psy2648         122 LVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-  199 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-  199 (708)
                      +||||+.+ +|.+++... ..+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus        85 lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~  163 (309)
T cd07845          85 LVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK  163 (309)
T ss_pred             EEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccC
Confidence            99999975 788887653 678999999999999999999999999999999999999999999999999987664322 


Q ss_pred             CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-------------------
Q psy2648         200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-------------------  260 (708)
Q Consensus       200 ~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-------------------  260 (708)
                      ......+++.|+|||++.+....+.++|||||||++|+|++|..||.+.+..+....+...                   
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (309)
T cd07845         164 PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVG  243 (309)
T ss_pred             CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccc
Confidence            2223346788999999876544457899999999999999999999988877766655431                   


Q ss_pred             CCCCC-----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhhC
Q psy2648         261 KYRIP-----------FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTLG  299 (708)
Q Consensus       261 ~~~~p-----------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~~  299 (708)
                      .+..+           ...++++.+||++||+.||++|||++++.   |+...
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~  296 (309)
T cd07845         244 KFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK  296 (309)
T ss_pred             cccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccC
Confidence            11111           12578899999999999999999999987   77643


No 182
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00  E-value=4.8e-40  Score=341.19  Aligned_cols=250  Identities=28%  Similarity=0.534  Sum_probs=215.1

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      +++|++.+.||+|+||.||+|.+..+++.||+|.++.... .....+.+.+|+++++.++|+||+++++++...+..|+|
T Consensus         1 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv   80 (267)
T cd08224           1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV   80 (267)
T ss_pred             CCceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            3689999999999999999999999999999999875433 334466788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         124 MEYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       124 mEy~~gg~L~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      |||+++++|.+++..    ...+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||++..+....
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~  160 (267)
T cd08224          81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence            999999999998864    2458999999999999999999999999999999999999999999999999987654322


Q ss_pred             -CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHcCCCC-CCC-CCCHHHHH
Q psy2648         200 -KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS--TLRELRERVLRGKYR-IPF-YMSTDCEN  274 (708)
Q Consensus       200 -~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~--~~~~l~~~i~~~~~~-~p~-~~s~~~~~  274 (708)
                       ......|++.|+|||.+.+..++ .++|||||||++|+|++|..||...  +..++.+.+..+.+. .|. ..+.++.+
T Consensus       161 ~~~~~~~~~~~y~apE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd08224         161 TAAHSLVGTPYYMSPERIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRD  239 (267)
T ss_pred             cccceecCCccccCHHHhccCCCC-chhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHH
Confidence             23346789999999999887775 7899999999999999999999654  344566666655442 444 67789999


Q ss_pred             HHHHhhhhCCCCCCCHHHHhh
Q psy2648         275 LLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      +|.+||..+|++||++.++..
T Consensus       240 ~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         240 LVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHHHHcCCCcccCCCHHHHHH
Confidence            999999999999999998774


No 183
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00  E-value=2.2e-40  Score=348.09  Aligned_cols=244  Identities=32%  Similarity=0.511  Sum_probs=210.9

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYA  127 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~  127 (708)
                      |++.+.||+|+||.||+|++..++..||+|.+...  .....+.+.+|+++++.++||||+++++++......|+||||+
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~   84 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   84 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence            78899999999999999999999999999998654  2345567889999999999999999999999999999999999


Q ss_pred             CCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCccccc
Q psy2648         128 SGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTFC  205 (708)
Q Consensus       128 ~gg~L~~~i~~-~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~~~~  205 (708)
                      ++++|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .......
T Consensus        85 ~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  164 (282)
T cd06643          85 AGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI  164 (282)
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence            99999988765 457999999999999999999999999999999999999999999999999998754322 2234567


Q ss_pred             cCCcccccccccC-----CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHHHH
Q psy2648         206 GSPPYAAPELFQG-----KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---RIPFYMSTDCENLLK  277 (708)
Q Consensus       206 Gt~~Y~APE~l~~-----~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~---~~p~~~s~~~~~Li~  277 (708)
                      |++.|+|||++..     ..+ +.++|||||||++|+|++|..||...+..+....+.....   ..|...+.++.+||.
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~~-~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  243 (282)
T cd06643         165 GTPYWMAPEVVMCETSKDRPY-DYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLK  243 (282)
T ss_pred             ccccccCHhhccccCCCCCCC-CccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHH
Confidence            8999999999842     333 3689999999999999999999998877666666554432   345567899999999


Q ss_pred             HhhhhCCCCCCCHHHHh
Q psy2648         278 KFLVLNPAKRASLEVSG  294 (708)
Q Consensus       278 ~~L~~dP~~Rps~~~~~  294 (708)
                      +||..||.+||+++++.
T Consensus       244 ~~l~~~p~~Rp~~~~il  260 (282)
T cd06643         244 KCLEKNVDARWTTTQLL  260 (282)
T ss_pred             HHccCChhhCcCHHHHh
Confidence            99999999999999877


No 184
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00  E-value=1.5e-40  Score=349.83  Aligned_cols=250  Identities=26%  Similarity=0.434  Sum_probs=212.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++|++++.||+|+||.||+|.+..+++.||+|.+... ........+.+|+++++.++||||+++++.+...+.+|+|||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE-LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME   79 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence            3689999999999999999999999999999998654 234445678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc
Q psy2648         126 YASGGEVFDYLVLH---GRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL  201 (708)
Q Consensus       126 y~~gg~L~~~i~~~---~~l~e~~~~~i~~QI~~aL~yLH~-~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~  201 (708)
                      |+++++|..++...   ..+++..++.++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..+.. ...
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-~~~  158 (286)
T cd06622          80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA-SLA  158 (286)
T ss_pred             ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC-Ccc
Confidence            99999999888653   378999999999999999999997 5999999999999999999999999999876532 233


Q ss_pred             cccccCCcccccccccCCcc-----CCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH---HHcCC-CCCCCCCCHHH
Q psy2648         202 DTFCGSPPYAAPELFQGKKY-----DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRER---VLRGK-YRIPFYMSTDC  272 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~-----~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~---i~~~~-~~~p~~~s~~~  272 (708)
                      ....|++.|+|||++.+...     .+.++|||||||++|+|++|..||...+.......   +..+. ..+|...+.++
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T cd06622         159 KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDA  238 (286)
T ss_pred             ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHH
Confidence            45678899999999865432     14689999999999999999999987655544333   33333 34666789999


Q ss_pred             HHHHHHhhhhCCCCCCCHHHHh---hhh
Q psy2648         273 ENLLKKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       273 ~~Li~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                      .+||.+||+.||++||+++++.   |+.
T Consensus       239 ~~li~~~l~~~p~~Rp~~~~l~~~~~~~  266 (286)
T cd06622         239 QDFVAKCLNKIPNRRPTYAQLLEHPWLV  266 (286)
T ss_pred             HHHHHHHcccCcccCCCHHHHhcChhhh
Confidence            9999999999999999999887   654


No 185
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=100.00  E-value=3.8e-40  Score=341.54  Aligned_cols=248  Identities=31%  Similarity=0.508  Sum_probs=214.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++|++.+.||.|+||.||+|.+..++..||+|++....... ..+.+.+|+.+|+.++||||+++++.+.....+|+|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   79 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP   79 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence            47999999999999999999999999999999997655433 55678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC--
Q psy2648         126 YASGGEVFDYLVLH---GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--  200 (708)
Q Consensus       126 y~~gg~L~~~i~~~---~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~--  200 (708)
                      |+++++|.+++...   ..+++..++.++.||+.||.|||++||+||||||+||++++++.+||+|||++........  
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~  159 (267)
T cd06610          80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT  159 (267)
T ss_pred             ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc
Confidence            99999999999764   4589999999999999999999999999999999999999999999999999876644322  


Q ss_pred             ---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC-CC-----CCCCHH
Q psy2648         201 ---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR-IP-----FYMSTD  271 (708)
Q Consensus       201 ---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~-~p-----~~~s~~  271 (708)
                         ....+|++.|+|||++......+.++|+|||||++|+|++|+.||...+..+....+...... ++     ..++++
T Consensus       160 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd06610         160 RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKS  239 (267)
T ss_pred             ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHH
Confidence               234578999999999877633457899999999999999999999887766666665554322 22     145788


Q ss_pred             HHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         272 CENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       272 ~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +.++|.+||..||++||+++++.
T Consensus       240 ~~~li~~~l~~~p~~Rp~~~~ll  262 (267)
T cd06610         240 FRKMISLCLQKDPSKRPTAEELL  262 (267)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHh
Confidence            99999999999999999999876


No 186
>KOG1989|consensus
Probab=100.00  E-value=4.3e-41  Score=381.78  Aligned_cols=245  Identities=33%  Similarity=0.533  Sum_probs=207.8

Q ss_pred             CccC--CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEE-Ee--
Q psy2648          43 PHIG--KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVI-ET--  116 (708)
Q Consensus        43 ~~~~--~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~-~~--  116 (708)
                      ..+|  +++|.+.|.+|+|+.||+|+....|..||+|++-..  +...++.+.+||++|++|. |||||.+++.. ..  
T Consensus        32 ~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~  109 (738)
T KOG1989|consen   32 FTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRS  109 (738)
T ss_pred             EEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEecccccccc
Confidence            3455  467889999999999999999998899999998654  5567788899999999997 99999999932 11  


Q ss_pred             ----CCEEEEEEeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCCEEEcCCCcEEEEe
Q psy2648         117 ----EKTLYLVMEYASGGEVFDYLVL--HGRMKEKEARAKFRQIVSAVQYCHQKK--IIHRDLKAENLLLDSEMNIKIAD  188 (708)
Q Consensus       117 ----~~~~ylVmEy~~gg~L~~~i~~--~~~l~e~~~~~i~~QI~~aL~yLH~~g--IvHRDLKPeNILld~~~~iKL~D  188 (708)
                          .-.++|.||||.||.|.|++..  ..+|+|.+++.||.|++.||.+||...  |||||||-|||||+.+|+.||||
T Consensus       110 ~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCD  189 (738)
T KOG1989|consen  110 SNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCD  189 (738)
T ss_pred             CCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCc
Confidence                1258999999999999999974  357999999999999999999999998  99999999999999999999999


Q ss_pred             ccCccccCCCC-Ccc---------ccccCCcccccccc---cCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q psy2648         189 FGFSNEFTPGN-KLD---------TFCGSPPYAAPELF---QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRE  255 (708)
Q Consensus       189 FGls~~~~~~~-~~~---------~~~Gt~~Y~APE~l---~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~  255 (708)
                      ||.+......- ...         ...-|+.|.|||++   .+... +.|+|||+|||+||.|+....||++...    -
T Consensus       190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI-~eKsDIWALGclLYkLCy~t~PFe~sg~----l  264 (738)
T KOG1989|consen  190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPI-GEKSDIWALGCLLYKLCYFTTPFEESGK----L  264 (738)
T ss_pred             ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCC-cchhHHHHHHHHHHHHHHhCCCcCcCcc----e
Confidence            99876432211 110         12468999999998   34444 5899999999999999999999987632    3


Q ss_pred             HHHcCCCCCCC--CCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         256 RVLRGKYRIPF--YMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       256 ~i~~~~~~~p~--~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +|+.++|.+|.  ..+..+.+||+.||+.||.+||++-+++
T Consensus       265 aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~  305 (738)
T KOG1989|consen  265 AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVL  305 (738)
T ss_pred             eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHH
Confidence            68899999986  4788999999999999999999998776


No 187
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00  E-value=2.9e-40  Score=340.34  Aligned_cols=241  Identities=31%  Similarity=0.530  Sum_probs=213.7

Q ss_pred             eEEcccCceEEEEEEEcCC---CcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Q psy2648          52 KTIGKGNFAKVKLAKHVPT---GKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYAS  128 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~t---g~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~  128 (708)
                      +.||+|+||.||+|.+...   +..||||++....... ..+.+.+|+++++.++||||+++++++.+...+|+||||++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   79 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME   79 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence            4699999999999999866   8999999997654332 46678899999999999999999999999999999999999


Q ss_pred             CCChHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         129 GGEVFDYLVLH---------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       129 gg~L~~~i~~~---------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      +++|.+++...         ..+++.++..++.||+.||+|||+++|+||||||+||+++.++.+||+|||++.......
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~  159 (262)
T cd00192          80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD  159 (262)
T ss_pred             CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccccc
Confidence            99999999875         779999999999999999999999999999999999999999999999999997664332


Q ss_pred             ---CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHH
Q psy2648         200 ---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCEN  274 (708)
Q Consensus       200 ---~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~  274 (708)
                         ......+++.|+|||.+....+ +.++|||||||++|+|++ |..||...+..++.+.+..+. ...|...++++.+
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (262)
T cd00192         160 YYRKKTGGKLPIRWMAPESLKDGIF-TSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYE  238 (262)
T ss_pred             ccccccCCCcCccccCHHHhccCCc-chhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHH
Confidence               2334567889999999987766 478999999999999999 699999998888888887653 3467778999999


Q ss_pred             HHHHhhhhCCCCCCCHHHHh
Q psy2648         275 LLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +|.+||..||++|||++++.
T Consensus       239 li~~~l~~~p~~Rps~~~l~  258 (262)
T cd00192         239 LMLSCWQLDPEDRPTFSELV  258 (262)
T ss_pred             HHHHHccCCcccCcCHHHHH
Confidence            99999999999999999875


No 188
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00  E-value=4.4e-40  Score=358.14  Aligned_cols=250  Identities=28%  Similarity=0.509  Sum_probs=208.3

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC------
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE------  117 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------  117 (708)
                      ..++|++.+.||+|+||.||+|.+..+++.||||++.+..........+.+|+.+++.++||||+++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            35689999999999999999999999999999999976544445556788999999999999999999998654      


Q ss_pred             CEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC
Q psy2648         118 KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP  197 (708)
Q Consensus       118 ~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~  197 (708)
                      ..+|+||||+.+ +|.+++...  +++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  170 (353)
T cd07850          94 QDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  170 (353)
T ss_pred             CcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence            357999999964 888877543  89999999999999999999999999999999999999999999999999986654


Q ss_pred             CCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-----------------
Q psy2648         198 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-----------------  260 (708)
Q Consensus       198 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-----------------  260 (708)
                      ........+++.|+|||++.+..++ .++|||||||++|+|++|+.||...+.......+...                 
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (353)
T cd07850         171 SFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVR  249 (353)
T ss_pred             CCCCCCCcccccccCHHHHhCCCCC-CchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhh
Confidence            4444556789999999999988875 7899999999999999999999876644333332210                 


Q ss_pred             -----CCC--------------C-------CCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhh
Q psy2648         261 -----KYR--------------I-------PFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       261 -----~~~--------------~-------p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                           ...              .       +...+.++.+||.+||+.||++|||+++++   |+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~  315 (353)
T cd07850         250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN  315 (353)
T ss_pred             HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence                 000              0       112355789999999999999999999987   665


No 189
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00  E-value=1.5e-40  Score=345.70  Aligned_cols=251  Identities=26%  Similarity=0.518  Sum_probs=214.5

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      +++|++.+.||+|+||.||+|.+..+++.||||.+.+... .......+.+|+++++.++||||+++++++...+.+|++
T Consensus         1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v   80 (267)
T cd08229           1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV   80 (267)
T ss_pred             CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence            4689999999999999999999999999999998876433 334456788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         124 MEYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       124 mEy~~gg~L~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      |||+++++|.+++..    ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd08229          81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence            999999999998864    3468999999999999999999999999999999999999999999999999987654322


Q ss_pred             -CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHcCCCC-CC-CCCCHHHHH
Q psy2648         200 -KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST--LRELRERVLRGKYR-IP-FYMSTDCEN  274 (708)
Q Consensus       200 -~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~--~~~l~~~i~~~~~~-~p-~~~s~~~~~  274 (708)
                       .....+|++.|+|||++.+..++ .++|||||||++|+|++|..||.+..  ..++.+.+....+. .| ...++++.+
T Consensus       161 ~~~~~~~~~~~~~ape~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd08229         161 TAAHSLVGTPYYMSPERIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ  239 (267)
T ss_pred             cccccccCCcCccCHHHhcCCCcc-chhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHH
Confidence             23456799999999999887764 78999999999999999999997653  34555566554433 22 357889999


Q ss_pred             HHHHhhhhCCCCCCCHHHHhhh
Q psy2648         275 LLKKFLVLNPAKRASLEVSGEV  296 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~~~  296 (708)
                      +|.+||..||++|||++++...
T Consensus       240 li~~~l~~~p~~Rpt~~~i~~~  261 (267)
T cd08229         240 LVNMCINPDPEKRPDITYVYDV  261 (267)
T ss_pred             HHHHhcCCCcccCCCHHHHHHH
Confidence            9999999999999999987643


No 190
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00  E-value=4e-40  Score=339.62  Aligned_cols=247  Identities=27%  Similarity=0.459  Sum_probs=215.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC---ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL---NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      +|+..+.||+|+||+||+|....+++.||||.+.....   ..+..+.+.+|+.+++.++||||+++++++.....+|+|
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            58888999999999999999998999999999876432   234556788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccc
Q psy2648         124 MEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT  203 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~  203 (708)
                      |||+++++|.+++...+.+++..+..++.||+.||.|||+.||+|+||||+||+++.++.+||+|||++...........
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~  160 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS  160 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccccccc
Confidence            99999999999998888899999999999999999999999999999999999999999999999999876544433456


Q ss_pred             cccCCcccccccccCCc-cCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-C-CCCCCCCCCHHHHHHHHHhh
Q psy2648         204 FCGSPPYAAPELFQGKK-YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR-G-KYRIPFYMSTDCENLLKKFL  280 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~-~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~-~-~~~~p~~~s~~~~~Li~~~L  280 (708)
                      ..|++.|+|||.+.... + +.++|+|||||++|+|++|..||......+....+.. . ...+|...++++.++|.+||
T Consensus       161 ~~~~~~y~~pe~~~~~~~~-~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  239 (258)
T cd06632         161 FKGSPYWMAPEVIAQQGGY-GLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCL  239 (258)
T ss_pred             cCCCcceeCHHHhcCCCCC-CchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHh
Confidence            77999999999987665 4 4789999999999999999999987765554444443 2 23456678899999999999


Q ss_pred             hhCCCCCCCHHHHh
Q psy2648         281 VLNPAKRASLEVSG  294 (708)
Q Consensus       281 ~~dP~~Rps~~~~~  294 (708)
                      ..||.+||+++++.
T Consensus       240 ~~~p~~Rp~~~~~l  253 (258)
T cd06632         240 QRDPSLRPTAAELL  253 (258)
T ss_pred             hcCcccCcCHHHHh
Confidence            99999999999876


No 191
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00  E-value=6.8e-40  Score=340.14  Aligned_cols=247  Identities=26%  Similarity=0.414  Sum_probs=211.8

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      .++|++.+.||+|+||.||+|.+. .++.||||.+......   .+.+.+|+.+++.++||||+++++++...+.+|+||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMD---PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT   80 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCccc---HHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence            357999999999999999999875 4578999998765432   345788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc-
Q psy2648         125 EYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-  201 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~-  201 (708)
                      ||+++++|.+++....  .+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......... 
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~  160 (261)
T cd05068          81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA  160 (261)
T ss_pred             ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc
Confidence            9999999999997654  6899999999999999999999999999999999999999999999999998765422111 


Q ss_pred             -cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHH
Q psy2648         202 -DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYMSTDCENLLKK  278 (708)
Q Consensus       202 -~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~p~~~s~~~~~Li~~  278 (708)
                       .....+..|+|||++.+..++ .++|||||||++|+|++ |+.||.+.+..++...+... ....|...+.++.+++.+
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  239 (261)
T cd05068         161 REGAKFPIKWTAPEAALYNRFS-IKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLD  239 (261)
T ss_pred             cCCCcCceeccCccccccCCCC-chhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence             112234579999999877764 78999999999999999 99999998888887777654 234556678999999999


Q ss_pred             hhhhCCCCCCCHHHHhhh
Q psy2648         279 FLVLNPAKRASLEVSGEV  296 (708)
Q Consensus       279 ~L~~dP~~Rps~~~~~~~  296 (708)
                      ||..||.+||+++++.+.
T Consensus       240 ~l~~~P~~Rp~~~~l~~~  257 (261)
T cd05068         240 CWKEDPDDRPTFETLQWK  257 (261)
T ss_pred             HhhcCcccCCCHHHHHHH
Confidence            999999999999988764


No 192
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00  E-value=4.4e-40  Score=345.08  Aligned_cols=249  Identities=25%  Similarity=0.391  Sum_probs=212.2

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcC-----CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVP-----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT  119 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~-----tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  119 (708)
                      .++|++.+.||+|+||.||+|.+..     ++..||+|.+.... .......+.+|+.+++.++||||+++++++.+...
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            4579999999999999999999987     78899999886433 23334568899999999999999999999998889


Q ss_pred             EEEEEeccCCCChHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCC---cEEEEec
Q psy2648         120 LYLVMEYASGGEVFDYLVLHG-------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM---NIKIADF  189 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~-------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~---~iKL~DF  189 (708)
                      .|+||||+++++|.+++...+       .+++.++..++.||+.||+|||+++++||||||+|||++.++   .+||+||
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df  163 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF  163 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence            999999999999999997653       488999999999999999999999999999999999998765   5999999


Q ss_pred             cCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCC
Q psy2648         190 GFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRI  264 (708)
Q Consensus       190 Gls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~  264 (708)
                      |+++.......   ......++.|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..++...+... ....
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~  242 (277)
T cd05036         164 GMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFT-SKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDP  242 (277)
T ss_pred             ccccccCCccceecCCCCCccHhhCCHHHHhcCCcC-chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCC
Confidence            99976532211   1122335679999999887774 79999999999999997 99999998888877777654 3455


Q ss_pred             CCCCCHHHHHHHHHhhhhCCCCCCCHHHHhh
Q psy2648         265 PFYMSTDCENLLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       265 p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      |..++.++.++|.+||+.||++||+++++..
T Consensus       243 ~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~  273 (277)
T cd05036         243 PKGCPGPVYRIMTDCWQHTPEDRPNFATILE  273 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            6778899999999999999999999998773


No 193
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=100.00  E-value=3e-40  Score=346.94  Aligned_cols=249  Identities=30%  Similarity=0.520  Sum_probs=210.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++|++.+.||+|+||.||+|.+..+++.||||+++.........+.+.+|+++++.++||||+++++++...+.+|+|||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            47999999999999999999999999999999987655444455678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC--Cccc
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--KLDT  203 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~--~~~~  203 (708)
                      |++++.+..++.....+++.++..++.||+.||.|||+++|+||||||+||++++++.+||+|||++.......  ....
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD  160 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccC
Confidence            99987777766666779999999999999999999999999999999999999999999999999987665433  3345


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc--------------------C-CC
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR--------------------G-KY  262 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~--------------------~-~~  262 (708)
                      ..++..|+|||++.+....+.++|||||||++|+|++|..||.+.+..+....+..                    + .+
T Consensus       161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd07833         161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAF  240 (288)
T ss_pred             cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccccc
Confidence            67889999999998873335799999999999999999999987654433222211                    0 00


Q ss_pred             -----------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         263 -----------RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       263 -----------~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                 .+|..+++++.+||++||..||++||+++++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il  283 (288)
T cd07833         241 PEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELL  283 (288)
T ss_pred             CCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHh
Confidence                       12334588999999999999999999999876


No 194
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00  E-value=2.5e-40  Score=344.85  Aligned_cols=246  Identities=28%  Similarity=0.469  Sum_probs=206.8

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeC------
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIETE------  117 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~------  117 (708)
                      -+.|++.+.||+|+||.||+|.+..+++.||||++.....   ....+.+|+.+++.+ +||||+++++++...      
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            4679999999999999999999999999999999975432   234678899999998 699999999998753      


Q ss_pred             CEEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcccc
Q psy2648         118 KTLYLVMEYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF  195 (708)
Q Consensus       118 ~~~ylVmEy~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~  195 (708)
                      ..+|+||||+.+++|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+||++++++.+||+|||++...
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~  161 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  161 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence            4689999999999999998764  36899999999999999999999999999999999999999999999999998765


Q ss_pred             CCC-CCccccccCCcccccccccC-----CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC--CCCC
Q psy2648         196 TPG-NKLDTFCGSPPYAAPELFQG-----KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR--IPFY  267 (708)
Q Consensus       196 ~~~-~~~~~~~Gt~~Y~APE~l~~-----~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~--~p~~  267 (708)
                      ... ......+|++.|+|||++.+     ..+ ..++|||||||++|+|++|..||...........+......  .+..
T Consensus       162 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~-~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  240 (272)
T cd06637         162 DRTVGRRNTFIGTPYWMAPEVIACDENPDATY-DFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKK  240 (272)
T ss_pred             ccccccCCcccccccccCHhHhccccCcCCCC-CchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCC
Confidence            322 23345689999999999863     234 36899999999999999999999876655544444433222  2345


Q ss_pred             CCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         268 MSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       268 ~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .+.++.+||.+||..||.+|||++++.
T Consensus       241 ~~~~~~~li~~~l~~~p~~Rpt~~~il  267 (272)
T cd06637         241 WSKKFQSFIESCLVKNHSQRPTTEQLM  267 (272)
T ss_pred             cCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence            678999999999999999999999876


No 195
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00  E-value=3.4e-40  Score=341.71  Aligned_cols=243  Identities=26%  Similarity=0.491  Sum_probs=209.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++.+.||+|+||.||+|.+. ++..+|||++.+....   ...+.+|+.+++.++||||+++++++...+..|+||||
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY   80 (256)
T ss_pred             HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence            5889999999999999999886 4678999998754432   24577899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc--cc
Q psy2648         127 ASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL--DT  203 (708)
Q Consensus       127 ~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~--~~  203 (708)
                      +++++|.+++..+ +.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++........  ..
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~  160 (256)
T cd05059          81 MANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG  160 (256)
T ss_pred             CCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCC
Confidence            9999999999764 46899999999999999999999999999999999999999999999999998755332211  11


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHhhh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYMSTDCENLLKKFLV  281 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~p~~~s~~~~~Li~~~L~  281 (708)
                      ..++..|+|||.+.+..++ .++|||||||++|+|++ |..||...+..++...+..+ ....|...+.++.+++.+||.
T Consensus       161 ~~~~~~y~~Pe~~~~~~~~-~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  239 (256)
T cd05059         161 TKFPVKWAPPEVFDYSRFS-SKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWH  239 (256)
T ss_pred             CCCCccccCHHHhccCCCC-chhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhc
Confidence            1234579999999887774 78999999999999999 89999988888888877766 334566789999999999999


Q ss_pred             hCCCCCCCHHHHh
Q psy2648         282 LNPAKRASLEVSG  294 (708)
Q Consensus       282 ~dP~~Rps~~~~~  294 (708)
                      .+|++|||++++.
T Consensus       240 ~~p~~Rpt~~~~l  252 (256)
T cd05059         240 EKPEDRPAFKKLL  252 (256)
T ss_pred             CChhhCcCHHHHH
Confidence            9999999999876


No 196
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=100.00  E-value=9.3e-40  Score=346.96  Aligned_cols=250  Identities=32%  Similarity=0.523  Sum_probs=215.9

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ..+|++.+.||.|+||.||+|.+..+++.||||.+.....  ...+.+.+|+.+++.++||||+++++++.....+|+||
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   95 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM   95 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence            4579999999999999999999999999999999875432  23456789999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDT  203 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~  203 (708)
                      ||+++++|.+++.. ..+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++....... ....
T Consensus        96 e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~  174 (296)
T cd06655          96 EYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST  174 (296)
T ss_pred             EecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCC
Confidence            99999999998864 468999999999999999999999999999999999999999999999999987654332 2234


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHhh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK---YRIPFYMSTDCENLLKKFL  280 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~---~~~p~~~s~~~~~Li~~~L  280 (708)
                      .+|++.|+|||.+.+..++ .++|||||||++|+|++|..||.+.+..+....+....   ...|..+++.+.+||++||
T Consensus       175 ~~~~~~y~aPE~~~~~~~~-~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  253 (296)
T cd06655         175 MVGTPYWMAPEVVTRKAYG-PKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCL  253 (296)
T ss_pred             cCCCccccCcchhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHh
Confidence            5789999999999877664 78999999999999999999999877655444443332   2345667899999999999


Q ss_pred             hhCCCCCCCHHHHh---hhhh
Q psy2648         281 VLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       281 ~~dP~~Rps~~~~~---~~~~  298 (708)
                      ..||.+||+++++.   |+..
T Consensus       254 ~~dp~~Rpt~~~il~~~~~~~  274 (296)
T cd06655         254 EMDVEKRGSAKELLQHPFLKL  274 (296)
T ss_pred             hcChhhCCCHHHHhhChHhhh
Confidence            99999999999887   7764


No 197
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00  E-value=2.6e-40  Score=366.23  Aligned_cols=250  Identities=25%  Similarity=0.408  Sum_probs=208.3

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCC-----CcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEe
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPT-----GKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVIET  116 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~t-----g~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~  116 (708)
                      ...++|++++.||+|+||.||+|.+...     +..||||++.+.. .....+.+.+|+++|+.++ |||||++++++..
T Consensus        34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~  112 (400)
T cd05105          34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK  112 (400)
T ss_pred             ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence            3356899999999999999999987533     3579999997543 2334567889999999996 9999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHHHc---------------------------------------------------------
Q psy2648         117 EKTLYLVMEYASGGEVFDYLVLH---------------------------------------------------------  139 (708)
Q Consensus       117 ~~~~ylVmEy~~gg~L~~~i~~~---------------------------------------------------------  139 (708)
                      ...+|||||||++|+|.++|..+                                                         
T Consensus       113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (400)
T cd05105         113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML  192 (400)
T ss_pred             CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence            99999999999999999998653                                                         


Q ss_pred             ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcC
Q psy2648         140 ---------------------------------------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS  180 (708)
Q Consensus       140 ---------------------------------------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~  180 (708)
                                                             ..+++.++..++.||+.||+|||+++|+||||||+|||++.
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~  272 (400)
T cd05105         193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQ  272 (400)
T ss_pred             hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeC
Confidence                                                   13677888999999999999999999999999999999999


Q ss_pred             CCcEEEEeccCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHH-HHHH
Q psy2648         181 EMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLR-ELRE  255 (708)
Q Consensus       181 ~~~iKL~DFGls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~-~l~~  255 (708)
                      ++.+||+|||+++.......   .....+++.|+|||++.+..++ .++|||||||++|+|++ |..||...... .+..
T Consensus       273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~  351 (400)
T cd05105         273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYT-TLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYN  351 (400)
T ss_pred             CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCC-chhhHHHHHHHHHHHHHCCCCCCcccchhHHHHH
Confidence            99999999999876533221   2234577889999999887764 79999999999999997 99999876543 3444


Q ss_pred             HHHcC-CCCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         256 RVLRG-KYRIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       256 ~i~~~-~~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .+..+ ....|...+.++.++|.+||..||++||++.++.
T Consensus       352 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~  391 (400)
T cd05105         352 KIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLS  391 (400)
T ss_pred             HHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHH
Confidence            45444 2345667889999999999999999999998876


No 198
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00  E-value=3.8e-40  Score=341.94  Aligned_cols=243  Identities=38%  Similarity=0.682  Sum_probs=215.2

Q ss_pred             EcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCCh
Q psy2648          54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEV  132 (708)
Q Consensus        54 LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg~L  132 (708)
                      ||.|+||.||+|.+..+++.||||++.+.... ....+.+.+|+.+++.++||||+++++.+.+...+|+||||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            69999999999999999999999999875442 34456788999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccccccCCcccc
Q psy2648         133 FDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAA  212 (708)
Q Consensus       133 ~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~~Gt~~Y~A  212 (708)
                      .+++.....+++..+..++.||+.||+|||+++++|+||||+||+++.++.+||+|||++............+|++.|+|
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~  160 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVA  160 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccC
Confidence            99998888899999999999999999999999999999999999999999999999999987654433445678999999


Q ss_pred             cccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHH--cCCCCCCCCCCHHHHHHHHHhhhhCCCCCC
Q psy2648         213 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST--LRELRERVL--RGKYRIPFYMSTDCENLLKKFLVLNPAKRA  288 (708)
Q Consensus       213 PE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~--~~~l~~~i~--~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rp  288 (708)
                      ||++.+..++ .++|+|||||++|+|++|..||....  ..++...+.  .....+|...++++.++|.+||..||++||
T Consensus       161 PE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~  239 (262)
T cd05572         161 PEIILNKGYD-FSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERL  239 (262)
T ss_pred             hhHhcCCCCC-ChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCc
Confidence            9999877764 78999999999999999999998776  667777777  345567777789999999999999999999


Q ss_pred             C-----HHHHh---hhh
Q psy2648         289 S-----LEVSG---EVT  297 (708)
Q Consensus       289 s-----~~~~~---~~~  297 (708)
                      +     ++++.   |+.
T Consensus       240 ~~~~~~~~~l~~~~~~~  256 (262)
T cd05572         240 GNLKGGIKDIKKHKWFN  256 (262)
T ss_pred             CCcccCHHHHhcChhhh
Confidence            9     77776   654


No 199
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00  E-value=4.2e-40  Score=344.69  Aligned_cols=244  Identities=28%  Similarity=0.479  Sum_probs=203.9

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeC--CEEEEEE
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETE--KTLYLVM  124 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~--~~~ylVm  124 (708)
                      |++.+.||+|+||.||+|.+..+++.||||++.+..... .....++|+.+++++. ||||+++++++.+.  +.+|+||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~   79 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL-EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF   79 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc-hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence            788999999999999999999999999999987653322 2234568999999885 99999999999987  8899999


Q ss_pred             eccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccc
Q psy2648         125 EYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT  203 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~  203 (708)
                      ||++ ++|.+++... ..+++.+++.++.||+.||+|||++||+||||||+||+++. +.+||+|||++...........
T Consensus        80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~  157 (282)
T cd07831          80 ELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTE  157 (282)
T ss_pred             ecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcCC
Confidence            9997 5888888764 57899999999999999999999999999999999999999 9999999999986654444445


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc------------------CCCCCC
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR------------------GKYRIP  265 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~------------------~~~~~p  265 (708)
                      ..+++.|+|||++....+.+.++|||||||++|+|++|..||.+.+..+....+..                  ..+.+|
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (282)
T cd07831         158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFP  237 (282)
T ss_pred             CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCc
Confidence            67899999999876544446799999999999999999999998776554443321                  011111


Q ss_pred             -----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         266 -----------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       266 -----------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                 ...+.++.+||.+||.+||++||++++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l  277 (282)
T cd07831         238 SKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQAL  277 (282)
T ss_pred             ccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHh
Confidence                       23578999999999999999999999876


No 200
>KOG0194|consensus
Probab=100.00  E-value=5e-41  Score=368.86  Aligned_cols=252  Identities=27%  Similarity=0.471  Sum_probs=217.8

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCc---E-EEEEEeccC-CCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGK---E-VAIKIIDKT-QLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT  119 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~---~-vAvK~i~~~-~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  119 (708)
                      -.+-.+.+.||+|+||.||+|..+..+.   . ||||..... .........+++|+++|++++|||||++|++...+..
T Consensus       156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P  235 (474)
T KOG0194|consen  156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP  235 (474)
T ss_pred             ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence            3445566999999999999999876433   3 899998753 3566778889999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC
Q psy2648         120 LYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG  198 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~~-l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~  198 (708)
                      +|||||+|.||+|.+||++++. ++..+-..++.|.+.||+|||++++|||||-.+|+|++.++.+||+||||++.-...
T Consensus       236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~  315 (474)
T KOG0194|consen  236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQY  315 (474)
T ss_pred             cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcce
Confidence            9999999999999999999874 999999999999999999999999999999999999999999999999998754311


Q ss_pred             CCccccc-cCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCCC--CCCCCCHHHHH
Q psy2648         199 NKLDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYR--IPFYMSTDCEN  274 (708)
Q Consensus       199 ~~~~~~~-Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~~--~p~~~s~~~~~  274 (708)
                      ......+ --..|+|||.+....|+ +++|||||||++||+.+ |..||.+.+..++..+|....++  .|...+.++..
T Consensus       316 ~~~~~~~klPirWLAPEtl~~~~~s-~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~  394 (474)
T KOG0194|consen  316 VMKKFLKKLPIRWLAPETLNTGIFS-FKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAK  394 (474)
T ss_pred             eeccccccCcceecChhhhccCccc-cccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHH
Confidence            1112133 23479999999988775 89999999999999998 89999999999999999776665  45667889999


Q ss_pred             HHHHhhhhCCCCCCCHHHHh-hhh
Q psy2648         275 LLKKFLVLNPAKRASLEVSG-EVT  297 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~-~~~  297 (708)
                      ++.+|+..||++||++.++. ++.
T Consensus       395 ~~~~c~~~~p~~R~tm~~i~~~l~  418 (474)
T KOG0194|consen  395 VMKQCWKKDPEDRPTMSTIKKKLE  418 (474)
T ss_pred             HHHHhccCChhhccCHHHHHHHHH
Confidence            99999999999999999887 443


No 201
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=100.00  E-value=2.3e-40  Score=347.19  Aligned_cols=240  Identities=34%  Similarity=0.514  Sum_probs=207.6

Q ss_pred             EcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCCh
Q psy2648          54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEV  132 (708)
Q Consensus        54 LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg~L  132 (708)
                      ||+|+||.||+|.+..+|+.||+|++.+.... ....+.+.+|+++|+.++||||++++++++..+.+|+||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            68999999999999999999999999765432 22344567899999999999999999999999999999999999999


Q ss_pred             HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccccccCCcc
Q psy2648         133 FDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPY  210 (708)
Q Consensus       133 ~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~~Gt~~Y  210 (708)
                      .+++...+  .+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.............++..|
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y  160 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGY  160 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCc
Confidence            99998766  7999999999999999999999999999999999999999999999999998765444344456688899


Q ss_pred             cccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCH----HHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCC
Q psy2648         211 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTL----RELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK  286 (708)
Q Consensus       211 ~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~----~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~  286 (708)
                      +|||++.+..++ .++|||||||++|+|++|+.||.....    .++.+.+.......|...++++.++|.+||+.||.+
T Consensus       161 ~~PE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  239 (277)
T cd05577         161 MAPEVLQGEVYD-FSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEK  239 (277)
T ss_pred             CCHHHhcCCCCC-chhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhH
Confidence            999999887764 789999999999999999999987543    445555555555667778999999999999999999


Q ss_pred             CC-----CHHHHh
Q psy2648         287 RA-----SLEVSG  294 (708)
Q Consensus       287 Rp-----s~~~~~  294 (708)
                      ||     +++++.
T Consensus       240 R~~~~~~~~~~ll  252 (277)
T cd05577         240 RLGCRGGSADEVR  252 (277)
T ss_pred             ccCCCcccHHHHH
Confidence            99     666665


No 202
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=100.00  E-value=5.1e-40  Score=340.85  Aligned_cols=246  Identities=26%  Similarity=0.456  Sum_probs=211.0

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ..+|++++.||+|+||.||+|++.. +..||||.+......   ...+.+|+.+++.++||||+++++++.....+|+||
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd05113           3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT   78 (256)
T ss_pred             hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence            3569999999999999999998754 456999998754432   345789999999999999999999999888999999


Q ss_pred             eccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcc-
Q psy2648         125 EYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD-  202 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~-  202 (708)
                      ||+.+|+|.+++... ..+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......... 
T Consensus        79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~  158 (256)
T cd05113          79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS  158 (256)
T ss_pred             EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeec
Confidence            999999999999764 468999999999999999999999999999999999999999999999999987654332111 


Q ss_pred             -ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHh
Q psy2648         203 -TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYR-IPFYMSTDCENLLKKF  279 (708)
Q Consensus       203 -~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~~-~p~~~s~~~~~Li~~~  279 (708)
                       ...++..|+|||++.+..++ .++|||||||++|+|++ |..||...+..++...+..+... .|...+..+.++|.+|
T Consensus       159 ~~~~~~~~y~~pe~~~~~~~~-~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  237 (256)
T cd05113         159 VGSKFPVRWSPPEVLLYSKFS-SKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSC  237 (256)
T ss_pred             CCCccChhhCCHHHHhcCccc-chhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence             12345679999999877764 78999999999999998 99999988888888888776433 4556789999999999


Q ss_pred             hhhCCCCCCCHHHHhh
Q psy2648         280 LVLNPAKRASLEVSGE  295 (708)
Q Consensus       280 L~~dP~~Rps~~~~~~  295 (708)
                      |..||.+||++.++..
T Consensus       238 l~~~p~~Rp~~~~ll~  253 (256)
T cd05113         238 WHEKAEERPTFQQLLS  253 (256)
T ss_pred             cCCCcccCCCHHHHHH
Confidence            9999999999998763


No 203
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00  E-value=6.1e-40  Score=343.96  Aligned_cols=250  Identities=26%  Similarity=0.451  Sum_probs=204.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHH-HHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRI-MKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~i-l~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ++|++.+.||+|+||.||+|.+..+|+.||||++++...... ...+..|+.+ ++.++||||+++++++..+..+|+||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~   79 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE-QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM   79 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH-HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence            479999999999999999999999999999999976543332 3455666665 67789999999999999999999999


Q ss_pred             eccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         125 EYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       125 Ey~~gg~L~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH~~-gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      ||++ |+|.+++..    ...+++..+..++.||+.||+|||++ +++||||||+|||++.++.+||+|||++.......
T Consensus        80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~  158 (283)
T cd06617          80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV  158 (283)
T ss_pred             hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence            9997 578777654    24689999999999999999999997 99999999999999999999999999987654332


Q ss_pred             CccccccCCcccccccccCC----ccCCCchhHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHcCCCCCC-CCCCHHH
Q psy2648         200 KLDTFCGSPPYAAPELFQGK----KYDGPEVDVWSLGVILYTLVSGSLPFDGS--TLRELRERVLRGKYRIP-FYMSTDC  272 (708)
Q Consensus       200 ~~~~~~Gt~~Y~APE~l~~~----~~~~~~~DIWSlGvilyelltG~~Pf~~~--~~~~l~~~i~~~~~~~p-~~~s~~~  272 (708)
                      ......|+..|+|||++.+.    .+ +.++|+|||||++|+|++|+.||...  ....+...+......+| ...+.++
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  237 (283)
T cd06617         159 AKTIDAGCKPYMAPERINPELNQKGY-DVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEF  237 (283)
T ss_pred             ccccccCCccccChhhcCCccccccc-CccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHH
Confidence            22335789999999998652    23 47899999999999999999999753  23444433333333444 3468999


Q ss_pred             HHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         273 ENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       273 ~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                      .+||.+||..||++||+++++.   |+..
T Consensus       238 ~~li~~~l~~~p~~Rp~~~~il~~~~~~~  266 (283)
T cd06617         238 QDFVNKCLKKNYKERPNYPELLQHPFFEL  266 (283)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCchhhh
Confidence            9999999999999999999987   6653


No 204
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00  E-value=4.3e-40  Score=346.04  Aligned_cols=240  Identities=28%  Similarity=0.441  Sum_probs=203.7

Q ss_pred             EEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhh-HHHHHHHH---HHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Q psy2648          53 TIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGS-LQKLFREV---RIMKMLDHPNIVKLFQVIETEKTLYLVMEYAS  128 (708)
Q Consensus        53 ~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~-~~~~~~Ei---~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~  128 (708)
                      .||+|+||.||+|.+..+++.||||++.+....... ...+..|.   ++++..+||||++++++++..+.+|+||||+.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            489999999999999999999999999876543211 12233444   34455689999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccccccCC
Q psy2648         129 GGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP  208 (708)
Q Consensus       129 gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~~Gt~  208 (708)
                      |++|.+++...+.+++.+++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||++..+... .....+|++
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~  159 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KPHASVGTH  159 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc-CCcCcCCCc
Confidence            9999999988888999999999999999999999999999999999999999999999999998765322 234568999


Q ss_pred             cccccccccCC-ccCCCchhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCC
Q psy2648         209 PYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPFDGS---TLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNP  284 (708)
Q Consensus       209 ~Y~APE~l~~~-~~~~~~~DIWSlGvilyelltG~~Pf~~~---~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP  284 (708)
                      .|+|||++.+. .+ +.++|||||||++|+|++|..||.+.   ........+......+|...+.++.++|.+||..||
T Consensus       160 ~y~aPE~~~~~~~~-~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p  238 (278)
T cd05606         160 GYMAPEVLQKGVAY-DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDV  238 (278)
T ss_pred             CCcCcHHhcCCCCC-CcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCH
Confidence            99999999754 44 47899999999999999999999876   444555555555667777789999999999999999


Q ss_pred             CCCC-----CHHHHh
Q psy2648         285 AKRA-----SLEVSG  294 (708)
Q Consensus       285 ~~Rp-----s~~~~~  294 (708)
                      .+||     +++++.
T Consensus       239 ~~R~~~~~~~~~~ll  253 (278)
T cd05606         239 NRRLGCLGRGAQEVK  253 (278)
T ss_pred             HhccCCCCCCHHHHH
Confidence            9999     888876


No 205
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00  E-value=7.5e-40  Score=339.14  Aligned_cols=247  Identities=30%  Similarity=0.540  Sum_probs=213.9

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++.+.||+|+||.||+|.+..+++.||||++..........+.+.+|+.+++.++||||+++++++.....+++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            69999999999999999999999999999999987655545677899999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC-----c
Q psy2648         127 ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-----L  201 (708)
Q Consensus       127 ~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~-----~  201 (708)
                      +++++|.+++.....+++..++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||++........     .
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~  160 (264)
T cd06626          81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEV  160 (264)
T ss_pred             CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccc
Confidence            99999999998877799999999999999999999999999999999999999999999999999876543221     2


Q ss_pred             cccccCCcccccccccCCc---cCCCchhHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHcC-CCCCCCCC--CHHHHH
Q psy2648         202 DTFCGSPPYAAPELFQGKK---YDGPEVDVWSLGVILYTLVSGSLPFDGS-TLRELRERVLRG-KYRIPFYM--STDCEN  274 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~---~~~~~~DIWSlGvilyelltG~~Pf~~~-~~~~l~~~i~~~-~~~~p~~~--s~~~~~  274 (708)
                      ...++++.|+|||++.+..   + ..++|||||||++|+|++|..||... +.......+..+ ...+|...  ++++.+
T Consensus       161 ~~~~~~~~~~~PE~~~~~~~~~~-~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (264)
T cd06626         161 QSLAGTPAYMAPEVITGGKGKGH-GRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKD  239 (264)
T ss_pred             cCCcCCcCccChhhccCCCCCCC-CcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHH
Confidence            2457889999999998765   4 47899999999999999999999765 333333334333 33455544  889999


Q ss_pred             HHHHhhhhCCCCCCCHHHHh
Q psy2648         275 LLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ||.+||+.||.+||+++++.
T Consensus       240 li~~~l~~~p~~R~~~~~i~  259 (264)
T cd06626         240 FLDRCLESDPKKRPTASELL  259 (264)
T ss_pred             HHHHHccCCcccCCCHHHHh
Confidence            99999999999999999876


No 206
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=100.00  E-value=4.2e-40  Score=347.57  Aligned_cols=251  Identities=29%  Similarity=0.471  Sum_probs=214.4

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCC-----cEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEE
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTG-----KEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIE  115 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg-----~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~  115 (708)
                      +...++|++.+.||+|+||.||++.+....     ..||+|++.... .......+.+|+.+++.+ +||||+++++++.
T Consensus         8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   86 (293)
T cd05053           8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT   86 (293)
T ss_pred             ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence            344568999999999999999999987543     789999987643 234456688999999999 7999999999999


Q ss_pred             eCCEEEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEc
Q psy2648         116 TEKTLYLVMEYASGGEVFDYLVLH----------------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  179 (708)
Q Consensus       116 ~~~~~ylVmEy~~gg~L~~~i~~~----------------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld  179 (708)
                      ..+.+|+||||+++|+|.+++...                ..+++..+..++.||+.||.|||+++|+||||||+|||++
T Consensus        87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~  166 (293)
T cd05053          87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT  166 (293)
T ss_pred             CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc
Confidence            999999999999999999998642                4588999999999999999999999999999999999999


Q ss_pred             CCCcEEEEeccCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHH
Q psy2648         180 SEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRE  255 (708)
Q Consensus       180 ~~~~iKL~DFGls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~  255 (708)
                      .++.+||+|||+++.......   .....+++.|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..++.+
T Consensus       167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  245 (293)
T cd05053         167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK  245 (293)
T ss_pred             CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcC-cccceeehhhHHHHHhcCCCCCCCCCCHHHHHH
Confidence            999999999999976543221   1122345679999998877764 78999999999999998 999999988888888


Q ss_pred             HHHcCC-CCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         256 RVLRGK-YRIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       256 ~i~~~~-~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .+..+. ...|...+.++.+|+.+||..||.+|||++++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil  285 (293)
T cd05053         246 LLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLV  285 (293)
T ss_pred             HHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence            777664 345667889999999999999999999999876


No 207
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00  E-value=6.2e-40  Score=341.85  Aligned_cols=249  Identities=26%  Similarity=0.418  Sum_probs=212.1

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCc---EEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGK---EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~---~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~y  121 (708)
                      .++|++.+.||+|+||.||+|.+..++.   .||+|.++... .....+.+.+|+.+++.++||||+++++++..++.+|
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM   81 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            4579999999999999999999875554   79999987543 2344567889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q psy2648         122 LVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK  200 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~  200 (708)
                      +||||+++++|.+++... +.+++.++..++.||+.||.|||+++|+||||||+|||++.++.+||+|||++........
T Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd05066          82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  161 (267)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence            999999999999999775 4689999999999999999999999999999999999999999999999999876543221


Q ss_pred             -c---cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHH
Q psy2648         201 -L---DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCEN  274 (708)
Q Consensus       201 -~---~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~  274 (708)
                       .   ....++..|+|||++.+..+ +.++|+|||||++|+|++ |..||.+.+..++...+..+. .+.+...++++.+
T Consensus       162 ~~~~~~~~~~~~~y~~pe~~~~~~~-~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (267)
T cd05066         162 AAYTTRGGKIPIRWTAPEAIAYRKF-TSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQ  240 (267)
T ss_pred             eeeecCCCccceeecCHhHhccCcc-CchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHHH
Confidence             1   11223567999999988776 479999999999999886 999999888877777777652 2334567889999


Q ss_pred             HHHHhhhhCCCCCCCHHHHhh
Q psy2648         275 LLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      ++.+||+.+|.+||+++++..
T Consensus       241 li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         241 LMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHHHHcccCchhCCCHHHHHH
Confidence            999999999999999998763


No 208
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00  E-value=4.6e-40  Score=347.49  Aligned_cols=248  Identities=23%  Similarity=0.367  Sum_probs=210.4

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCC----------------cEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCee
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTG----------------KEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV  108 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg----------------~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv  108 (708)
                      .++|++.+.||+|+||.||+|.+..++                ..||+|++.... .....+.+.+|+++|+.++||||+
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~   82 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA   82 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence            458999999999999999999877544                568999987553 234556788999999999999999


Q ss_pred             eEEEEEEeCCEEEEEEeccCCCChHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEE
Q psy2648         109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-----------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL  177 (708)
Q Consensus       109 ~l~~~~~~~~~~ylVmEy~~gg~L~~~i~~~~-----------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNIL  177 (708)
                      ++++++..+..+++||||+.+++|.+++....           .+++..+..++.||+.||.|||++||+||||||+|||
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil  162 (296)
T cd05051          83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL  162 (296)
T ss_pred             EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence            99999999999999999999999999998765           6899999999999999999999999999999999999


Q ss_pred             EcCCCcEEEEeccCccccCCCC---CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc--CCCCCCCCCHHH
Q psy2648         178 LDSEMNIKIADFGFSNEFTPGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS--GSLPFDGSTLRE  252 (708)
Q Consensus       178 ld~~~~iKL~DFGls~~~~~~~---~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt--G~~Pf~~~~~~~  252 (708)
                      ++.++.+||+|||+++......   ......+++.|+|||++.+..++ .++|||||||++|+|++  |..||...+..+
T Consensus       163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~  241 (296)
T cd05051         163 VGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFT-TKSDVWAFGVTLWEILTLCREQPYEHLTDQQ  241 (296)
T ss_pred             ecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCC-ccchhhhhHHHHHHHHhcCCCCCCCCcChHH
Confidence            9999999999999987643322   12234567789999999876664 89999999999999998  789998877776


Q ss_pred             HHHHHHcC------C--CCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         253 LRERVLRG------K--YRIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       253 l~~~i~~~------~--~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +...+...      .  ...|...+.++.+||.+||+.||.+|||+.++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~  291 (296)
T cd05051         242 VIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIH  291 (296)
T ss_pred             HHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHH
Confidence            66655432      1  123445678999999999999999999999887


No 209
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00  E-value=5.1e-40  Score=385.91  Aligned_cols=247  Identities=28%  Similarity=0.435  Sum_probs=204.7

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      +++|++.+.||+|+||.||+|.+..+++.||||++..... .....+++.+|+++++.++||||+++++++.+.+..|+|
T Consensus         1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV   80 (932)
T PRK13184          1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT   80 (932)
T ss_pred             CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence            5799999999999999999999999999999999976533 233456788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCc
Q psy2648         124 MEYASGGEVFDYLVLH-----------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS  192 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~-----------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls  192 (708)
                      |||++||+|.+++...           ..++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA  160 (932)
T PRK13184         81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA  160 (932)
T ss_pred             EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence            9999999999988642           23455678889999999999999999999999999999999999999999999


Q ss_pred             cccCCC-------------------CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q psy2648         193 NEFTPG-------------------NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLREL  253 (708)
Q Consensus       193 ~~~~~~-------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l  253 (708)
                      +.....                   ......+||+.|+|||++.+..++ .++|||||||++|+|++|..||...+..++
T Consensus       161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S-~kSDIWSLGVILyELLTG~~PF~~~~~~ki  239 (932)
T PRK13184        161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPAS-ESTDIYALGVILYQMLTLSFPYRRKKGRKI  239 (932)
T ss_pred             eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCC-cHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence            765210                   011235799999999999888774 799999999999999999999987655443


Q ss_pred             HHHHHc-CCCCC-C-CCCCHHHHHHHHHhhhhCCCCCCCHHH
Q psy2648         254 RERVLR-GKYRI-P-FYMSTDCENLLKKFLVLNPAKRASLEV  292 (708)
Q Consensus       254 ~~~i~~-~~~~~-p-~~~s~~~~~Li~~~L~~dP~~Rps~~~  292 (708)
                      ...... ..... | ..+++.+.+++.+||..||++|++..+
T Consensus       240 ~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~e  281 (932)
T PRK13184        240 SYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQ  281 (932)
T ss_pred             hhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            322111 11111 1 256788999999999999999987543


No 210
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=4.1e-40  Score=369.82  Aligned_cols=240  Identities=23%  Similarity=0.351  Sum_probs=200.2

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      .+.|.+.+.||+|+||.||+|.+..+++.||||....        ..+.+|+++|++|+|||||++++++...+..||||
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~  239 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL  239 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence            4479999999999999999999999999999996421        23568999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC---C
Q psy2648         125 EYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN---K  200 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~---~  200 (708)
                      |++. ++|.+++... ..+++.+++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++......   .
T Consensus       240 e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~  318 (461)
T PHA03211        240 PKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPF  318 (461)
T ss_pred             EccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccccc
Confidence            9995 6899988765 469999999999999999999999999999999999999999999999999997653321   1


Q ss_pred             ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCC--------CHHHHHHHHHcCCCC---CC----
Q psy2648         201 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS--------TLRELRERVLRGKYR---IP----  265 (708)
Q Consensus       201 ~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~--------~~~~l~~~i~~~~~~---~p----  265 (708)
                      ....+||+.|+|||++.+..++ .++|||||||+||||++|..|+...        ...++.+.+....+.   +|    
T Consensus       319 ~~~~~GT~~Y~APE~~~~~~~~-~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~  397 (461)
T PHA03211        319 HYGIAGTVDTNAPEVLAGDPYT-PSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAG  397 (461)
T ss_pred             ccccCCCcCCcCHHHHcCCCCC-chHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcc
Confidence            2346799999999999988875 7999999999999999987665321        223444444332211   01    


Q ss_pred             ---------------------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         266 ---------------------------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       266 ---------------------------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                                 ...+.++.+||.+||+.||.+|||+++++
T Consensus       398 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL  453 (461)
T PHA03211        398 SRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELL  453 (461)
T ss_pred             hHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHh
Confidence                                       02456899999999999999999999988


No 211
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00  E-value=6.7e-40  Score=341.13  Aligned_cols=246  Identities=26%  Similarity=0.449  Sum_probs=209.2

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      .++|++.+.||+|+||.||+|.+..+ ..||||++.+....   .+.+.+|+++++.++||||++++++++. ...|+||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~   79 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT   79 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEE
Confidence            46799999999999999999988765 46999999764432   2467889999999999999999998754 5689999


Q ss_pred             eccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc-
Q psy2648         125 EYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-  201 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~-  201 (708)
                      ||+++|+|.+++...  ..+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||++......... 
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~  159 (262)
T cd05071          80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  159 (262)
T ss_pred             EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence            999999999999764  35789999999999999999999999999999999999999999999999998765433211 


Q ss_pred             -cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHH
Q psy2648         202 -DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLLKK  278 (708)
Q Consensus       202 -~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~~  278 (708)
                       ....++..|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..++...+..+. ...+...+.++.+||.+
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~~~-~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  238 (262)
T cd05071         160 RQGAKFPIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ  238 (262)
T ss_pred             ccCCcccceecCHhHhccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHH
Confidence             223466789999998877764 78999999999999999 999999888888877776552 33455678999999999


Q ss_pred             hhhhCCCCCCCHHHHhhh
Q psy2648         279 FLVLNPAKRASLEVSGEV  296 (708)
Q Consensus       279 ~L~~dP~~Rps~~~~~~~  296 (708)
                      ||..||++||+++++.++
T Consensus       239 ~l~~~p~~Rp~~~~~~~~  256 (262)
T cd05071         239 CWRKEPEERPTFEYLQAF  256 (262)
T ss_pred             HccCCcccCCCHHHHHHH
Confidence            999999999999988744


No 212
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=3.1e-40  Score=360.31  Aligned_cols=239  Identities=23%  Similarity=0.398  Sum_probs=196.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      .+|++++.||+|+||.||+|++..+++.||+|+..+..        ...|+.+|+.++|||||++++++......|+|||
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~--------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT--------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc--------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence            46999999999999999999999999999999864332        3569999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcccc
Q psy2648         126 YASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~  204 (708)
                      |+. ++|.+++... ..+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++............
T Consensus       138 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  216 (357)
T PHA03209        138 HYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGL  216 (357)
T ss_pred             ccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcccccc
Confidence            996 5888888654 56899999999999999999999999999999999999999999999999998754433334457


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCC-CCCCCCCH----------HHHHHHHHc-C--CCCCC-----
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS-LPFDGSTL----------RELRERVLR-G--KYRIP-----  265 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~-~Pf~~~~~----------~~l~~~i~~-~--~~~~p-----  265 (708)
                      .||+.|+|||++.+..++ .++|||||||++|+|+++. .+|.....          ..+...+.. +  ...+|     
T Consensus       217 ~gt~~y~aPE~~~~~~~~-~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  295 (357)
T PHA03209        217 AGTVETNAPEVLARDKYN-SKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGS  295 (357)
T ss_pred             cccccccCCeecCCCCCC-chhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCcc
Confidence            899999999999888875 7999999999999999854 44443211          111111111 0  00011     


Q ss_pred             -------------------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         266 -------------------------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       266 -------------------------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                               ...+.++.+||.+||+.||.+|||+++++
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l  349 (357)
T PHA03209        296 RLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEIL  349 (357)
T ss_pred             HHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHh
Confidence                                     13466788899999999999999999987


No 213
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=7.6e-40  Score=350.21  Aligned_cols=250  Identities=26%  Similarity=0.441  Sum_probs=212.8

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcC-------CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEE
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVP-------TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVI  114 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~-------tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~  114 (708)
                      ...++|.+.+.||+|+||.||+|++..       ....||+|++.... .......+.+|+++++.+ +||||+++++++
T Consensus         9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~   87 (314)
T cd05099           9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVC   87 (314)
T ss_pred             ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence            344689999999999999999998642       34579999987543 334456788999999999 699999999999


Q ss_pred             EeCCEEEEEEeccCCCChHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEE
Q psy2648         115 ETEKTLYLVMEYASGGEVFDYLVLH----------------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL  178 (708)
Q Consensus       115 ~~~~~~ylVmEy~~gg~L~~~i~~~----------------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILl  178 (708)
                      .....+|+||||+++|+|.+++...                ..++..++..++.||+.||.|||++||+||||||+|||+
T Consensus        88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill  167 (314)
T cd05099          88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV  167 (314)
T ss_pred             ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE
Confidence            9999999999999999999999763                247888999999999999999999999999999999999


Q ss_pred             cCCCcEEEEeccCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHH
Q psy2648         179 DSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELR  254 (708)
Q Consensus       179 d~~~~iKL~DFGls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~  254 (708)
                      +.++.+||+|||+++.......   .....+++.|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..++.
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~  246 (314)
T cd05099         168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYT-HQSDVWSFGILMWEIFTLGGSPYPGIPVEELF  246 (314)
T ss_pred             cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcC-ccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            9999999999999976543211   1222345679999999887764 78999999999999999 99999999888888


Q ss_pred             HHHHcCC-CCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         255 ERVLRGK-YRIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       255 ~~i~~~~-~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ..+..+. ...|...+.++.+||.+||..||++||+++++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll  287 (314)
T cd05099         247 KLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLV  287 (314)
T ss_pred             HHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHH
Confidence            8887664 345667788999999999999999999999877


No 214
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00  E-value=2.2e-40  Score=347.82  Aligned_cols=249  Identities=29%  Similarity=0.486  Sum_probs=209.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++|++.+.||+|+||.||+|.+..+++.||||++.+........+.+.+|+++|+.++||||+++++++.++..+|+|||
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            47999999999999999999999999999999987654433344567899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCcccc
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~~~  204 (708)
                      |++++.|..++.....+++.++..++.||+.||.|||+.+|+||||+|+||++++++.+||+|||++...... ......
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (286)
T cd07846          81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDY  160 (286)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcc
Confidence            9999999887776677999999999999999999999999999999999999999999999999998765432 223345


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-------------------CCCC-
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-------------------KYRI-  264 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-------------------~~~~-  264 (708)
                      .++..|+|||++.+....+.++|||||||++|+|++|..||...+..+....+...                   .... 
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T cd07846         161 VATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLP  240 (286)
T ss_pred             cceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccc
Confidence            68899999999876554457899999999999999999999876644333332210                   0001 


Q ss_pred             -----------CCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         265 -----------PFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       265 -----------p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                 +..++.++.+||.+||..||++||+++++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il  281 (286)
T cd07846         241 EVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLL  281 (286)
T ss_pred             cccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHh
Confidence                       124578899999999999999999999876


No 215
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=100.00  E-value=8e-40  Score=338.31  Aligned_cols=243  Identities=31%  Similarity=0.556  Sum_probs=213.0

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ..+|++.+.||+|+||.||+|...  |+.||||.+.....   ..+++.+|+.+++.++||||+++++++.+....|+||
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   79 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT   79 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence            457999999999999999999874  88999999975432   4567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcc
Q psy2648         125 EYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD  202 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~  202 (708)
                      ||+++++|.+++....  .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++......  .
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--~  157 (256)
T cd05039          80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--D  157 (256)
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc--c
Confidence            9999999999998765  68999999999999999999999999999999999999999999999999987653221  2


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHhh
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYMSTDCENLLKKFL  280 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~p~~~s~~~~~Li~~~L  280 (708)
                      ...++..|+|||++.+..+. .++|||||||++|+|++ |..||...+..++...+..+ ....|...++++.++|.+||
T Consensus       158 ~~~~~~~~~ape~~~~~~~~-~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  236 (256)
T cd05039         158 SGKLPVKWTAPEALREKKFS-TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCW  236 (256)
T ss_pred             cCCCcccccCchhhcCCcCC-cHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHh
Confidence            33455679999999877664 78999999999999997 99999999888888877665 33456677899999999999


Q ss_pred             hhCCCCCCCHHHHhh
Q psy2648         281 VLNPAKRASLEVSGE  295 (708)
Q Consensus       281 ~~dP~~Rps~~~~~~  295 (708)
                      ..||++||+++++..
T Consensus       237 ~~~p~~Rp~~~~l~~  251 (256)
T cd05039         237 ELDPAKRPTFKQLRE  251 (256)
T ss_pred             ccChhhCcCHHHHHH
Confidence            999999999998763


No 216
>KOG0193|consensus
Probab=100.00  E-value=2.7e-41  Score=367.23  Aligned_cols=253  Identities=24%  Similarity=0.380  Sum_probs=220.5

Q ss_pred             cCCCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC
Q psy2648          38 RERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE  117 (708)
Q Consensus        38 ~~~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~  117 (708)
                      .+..+...+...++..||+|+||+||+|+|..+   ||||+++....+++.++.|..|+.++++-+|.||+-+.+++...
T Consensus       384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p  460 (678)
T KOG0193|consen  384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP  460 (678)
T ss_pred             ccccccCHHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence            355566677889999999999999999999643   99999999888889999999999999999999999999999877


Q ss_pred             CEEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcccc-
Q psy2648         118 KTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-  195 (708)
Q Consensus       118 ~~~ylVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~-  195 (708)
                      .. .||+.+|+|.+|+.+|.-. .+|.....+.|++||+.||.|||.++|||||||..||+|.+++.|||.||||+..- 
T Consensus       461 ~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~  539 (678)
T KOG0193|consen  461 PL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT  539 (678)
T ss_pred             ce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeee
Confidence            65 9999999999999998643 56888899999999999999999999999999999999999999999999998542 


Q ss_pred             --CCCCCccccccCCcccccccccCC---ccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC-----C
Q psy2648         196 --TPGNKLDTFCGSPPYAAPELFQGK---KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI-----P  265 (708)
Q Consensus       196 --~~~~~~~~~~Gt~~Y~APE~l~~~---~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~-----p  265 (708)
                        .....+..-.|+..|||||++...   +| .+.+|||||||++|||++|.+||...+.++++-+|-+|-...     -
T Consensus       540 ~w~g~~q~~qp~gsilwmAPEvIRmqd~nPf-S~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~  618 (678)
T KOG0193|consen  540 RWSGEQQLEQPHGSLLWMAPEVIRMQDDNPF-SFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIR  618 (678)
T ss_pred             eeccccccCCCccchhhhcHHHHhhcccCCC-CcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhh
Confidence              334456667899999999999643   45 478999999999999999999999888888888888883221     1


Q ss_pred             CCCCHHHHHHHHHhhhhCCCCCCCHHHHhh
Q psy2648         266 FYMSTDCENLLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       266 ~~~s~~~~~Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      ...+.++++|+..||..++++||.+.+++.
T Consensus       619 s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  619 SNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             ccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            245568999999999999999999999884


No 217
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00  E-value=7.7e-40  Score=340.95  Aligned_cols=246  Identities=30%  Similarity=0.509  Sum_probs=209.2

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC---hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEe--CCEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN---PGSLQKLFREVRIMKMLDHPNIVKLFQVIET--EKTLY  121 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~y  121 (708)
                      +|++.+.||+|+||.||+|.+..+++.||+|++......   .+..+.+.+|+.+++.++||||+++++++.+  ...+|
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT   82 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence            699999999999999999999999999999998765332   2344567899999999999999999999876  36789


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC----
Q psy2648         122 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP----  197 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~----  197 (708)
                      ++|||+++++|.+++...+.+++...+.++.||+.||+|||+++|+||||||+||+++.++.+||+|||++.....    
T Consensus        83 l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  162 (266)
T cd06651          83 IFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS  162 (266)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc
Confidence            9999999999999998888899999999999999999999999999999999999999999999999999875432    


Q ss_pred             CCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHH
Q psy2648         198 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG--KYRIPFYMSTDCENL  275 (708)
Q Consensus       198 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~--~~~~p~~~s~~~~~L  275 (708)
                      ........++..|+|||++.+..++ .++|||||||++|+|++|+.||......+....+...  ...+|...++.+.+|
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  241 (266)
T cd06651         163 GTGIRSVTGTPYWMSPEVISGEGYG-RKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDF  241 (266)
T ss_pred             CCccccCCccccccCHHHhCCCCCC-chhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHH
Confidence            1222345688999999999887764 7899999999999999999999876655444333322  234566788999999


Q ss_pred             HHHhhhhCCCCCCCHHHHh
Q psy2648         276 LKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       276 i~~~L~~dP~~Rps~~~~~  294 (708)
                      | +||..||++||+++++.
T Consensus       242 i-~~~~~~p~~Rp~~~eil  259 (266)
T cd06651         242 L-GCIFVEARHRPSAEELL  259 (266)
T ss_pred             H-HHhcCChhhCcCHHHHh
Confidence            9 57778999999999886


No 218
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00  E-value=7.8e-40  Score=338.91  Aligned_cols=240  Identities=28%  Similarity=0.437  Sum_probs=206.9

Q ss_pred             eEEcccCceEEEEEEEcCCC---cEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTG---KEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYAS  128 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg---~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~  128 (708)
                      +.||+|+||.||+|.+..++   ..||+|.+...... ...+.+.+|+++|+.++|||||+++++++. ..+++||||++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~   78 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAP   78 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCC
Confidence            47999999999999876655   78999999765543 345678899999999999999999998764 46899999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc----ccc
Q psy2648         129 GGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL----DTF  204 (708)
Q Consensus       129 gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~----~~~  204 (708)
                      +|+|.+++.....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........    ...
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~  158 (257)
T cd05060          79 LGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAG  158 (257)
T ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCc
Confidence            9999999988888999999999999999999999999999999999999999999999999998765433221    111


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHhhhh
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCENLLKKFLVL  282 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~-~~p~~~s~~~~~Li~~~L~~  282 (708)
                      .++..|+|||.+.+..++ .++|||||||++|+|++ |..||...+..++...+..+.. ..|...+..+.++|.+||..
T Consensus       159 ~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  237 (257)
T cd05060         159 RWPLKWYAPECINYGKFS-SKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKY  237 (257)
T ss_pred             cccccccCHHHhcCCCCC-ccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcC
Confidence            234679999999887764 79999999999999998 9999998888888877776643 45667889999999999999


Q ss_pred             CCCCCCCHHHHh
Q psy2648         283 NPAKRASLEVSG  294 (708)
Q Consensus       283 dP~~Rps~~~~~  294 (708)
                      ||++||++.++.
T Consensus       238 ~p~~Rp~~~~l~  249 (257)
T cd05060         238 RPEDRPTFSELE  249 (257)
T ss_pred             ChhhCcCHHHHH
Confidence            999999999887


No 219
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00  E-value=7.3e-40  Score=341.41  Aligned_cols=248  Identities=23%  Similarity=0.405  Sum_probs=212.0

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCc---EEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGK---EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~---~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~y  121 (708)
                      ++.|++.+.||+|+||.||+|.+..+++   .||||++.+.. .....+.+..|+.+++.++||||+++++++.++..+|
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   81 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM   81 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence            4679999999999999999999987765   59999986542 3445667889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q psy2648         122 LVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK  200 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~  200 (708)
                      +||||+++++|.+++... +.+++.+++.++.|++.||+|||++|++||||||+|||++.++.+||+|||++........
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~  161 (269)
T cd05065          82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS  161 (269)
T ss_pred             EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence            999999999999998764 5689999999999999999999999999999999999999999999999999875533221


Q ss_pred             cc---ccc---cCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHH
Q psy2648         201 LD---TFC---GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYMSTDC  272 (708)
Q Consensus       201 ~~---~~~---Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~p~~~s~~~  272 (708)
                      ..   ...   .+..|+|||++.+..++ .++|||||||++|||++ |..||...+..++.+.+... ..+.|...+.++
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~-~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (269)
T cd05065         162 DPTYTSSLGGKIPIRWTAPEAIAYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTAL  240 (269)
T ss_pred             ccccccccCCCcceeecCHhHhccCccc-chhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHH
Confidence            11   111   23579999999887774 78999999999999886 99999998888888877654 223445678899


Q ss_pred             HHHHHHhhhhCCCCCCCHHHHh
Q psy2648         273 ENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       273 ~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .+++.+||..||++||+++++.
T Consensus       241 ~~li~~~l~~~p~~Rp~~~~i~  262 (269)
T cd05065         241 HQLMLDCWQKDRNARPKFGQIV  262 (269)
T ss_pred             HHHHHHHcCCChhhCcCHHHHH
Confidence            9999999999999999999876


No 220
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=100.00  E-value=4.3e-40  Score=348.33  Aligned_cols=251  Identities=29%  Similarity=0.449  Sum_probs=210.7

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC---hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN---PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      +|++.+.||+|+||.||+|.+..+++.||||.+......   ......+..|+++++.++||||+++++++.++..+|+|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            589999999999999999999999999999999866443   23345577899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCc
Q psy2648         124 MEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKL  201 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~  201 (708)
                      |||+ +++|.+++.... .+++.+++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++...... ...
T Consensus        81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~  159 (298)
T cd07841          81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKM  159 (298)
T ss_pred             Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccc
Confidence            9999 899999998766 7999999999999999999999999999999999999999999999999999765433 223


Q ss_pred             cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC----------------C---
Q psy2648         202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK----------------Y---  262 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~----------------~---  262 (708)
                      ....+++.|+|||++.+......++|||||||++|+|++|..||.+.+..+...++....                +   
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (298)
T cd07841         160 THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEF  239 (298)
T ss_pred             cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccc
Confidence            344578889999998664444578999999999999999988898776555444443210                0   


Q ss_pred             ----C-----CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         263 ----R-----IPFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       263 ----~-----~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                          .     .....+.++.+||.+||..||++|||+++++   |+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~  287 (298)
T cd07841         240 KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSN  287 (298)
T ss_pred             cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccC
Confidence                0     0123467899999999999999999999988   6654


No 221
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00  E-value=5.4e-40  Score=343.16  Aligned_cols=242  Identities=30%  Similarity=0.445  Sum_probs=204.2

Q ss_pred             eEEcccCceEEEEEEEcCCCc--EEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEEEeccC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGK--EVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTLYLVMEYAS  128 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~--~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ylVmEy~~  128 (708)
                      +.||+|+||.||+|+...++.  .+|+|.+... ......+.+.+|+++++++ +||||+++++++.....+|+||||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~   79 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP   79 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc-CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence            368999999999999988876  4688887632 2334456788999999999 79999999999999999999999999


Q ss_pred             CCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCc
Q psy2648         129 GGEVFDYLVLHG----------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS  192 (708)
Q Consensus       129 gg~L~~~i~~~~----------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls  192 (708)
                      +|+|.+++....                .+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~  159 (270)
T cd05047          80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS  159 (270)
T ss_pred             CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence            999999997643                4788999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCH
Q psy2648         193 NEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMST  270 (708)
Q Consensus       193 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~  270 (708)
                      ..............++.|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..++.+.+..+. ...|...+.
T Consensus       160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~-~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (270)
T cd05047         160 RGQEVYVKKTMGRLPVRWMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDD  238 (270)
T ss_pred             cccchhhhccCCCCccccCChHHHccCCCC-chhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcCCH
Confidence            643211111122345679999999877664 79999999999999997 999999988888887776653 345667789


Q ss_pred             HHHHHHHHhhhhCCCCCCCHHHHhh
Q psy2648         271 DCENLLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       271 ~~~~Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      ++.+|+.+||..||.+|||++++..
T Consensus       239 ~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         239 EVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             HHHHHHHHHcccChhhCCCHHHHHH
Confidence            9999999999999999999998874


No 222
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00  E-value=8.1e-40  Score=339.79  Aligned_cols=239  Identities=28%  Similarity=0.439  Sum_probs=203.4

Q ss_pred             EEcccCceEEEEEEEc--CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCC
Q psy2648          53 TIGKGNFAKVKLAKHV--PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGG  130 (708)
Q Consensus        53 ~LG~G~fg~V~la~~~--~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg  130 (708)
                      .||+|+||.||+|.+.  .++..||||++.... .....+.+.+|+.++++++||||++++++++. ..+|+||||++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~   79 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGG   79 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCC
Confidence            4899999999999875  455679999986542 33445678899999999999999999999864 5789999999999


Q ss_pred             ChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc----cccc
Q psy2648         131 EVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL----DTFC  205 (708)
Q Consensus       131 ~L~~~i~~-~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~----~~~~  205 (708)
                      +|.+++.. ...+++.++..++.||+.||.|||++|++||||||+|||++.++.+||+|||++.........    ....
T Consensus        80 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  159 (257)
T cd05115          80 PLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGK  159 (257)
T ss_pred             CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCC
Confidence            99999875 457899999999999999999999999999999999999999999999999998755432211    1122


Q ss_pred             cCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHhhhhC
Q psy2648         206 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLLKKFLVLN  283 (708)
Q Consensus       206 Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~~~L~~d  283 (708)
                      +++.|+|||++.+..++ .++|||||||++|+|++ |..||.+....++...+..+. ...|...++++.++|.+||..|
T Consensus       160 ~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~  238 (257)
T cd05115         160 WPLKWYAPECINFRKFS-SRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYK  238 (257)
T ss_pred             CCcccCCHHHHccCCCC-chhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            35689999999877764 78999999999999996 999999988888887777764 3466778899999999999999


Q ss_pred             CCCCCCHHHHh
Q psy2648         284 PAKRASLEVSG  294 (708)
Q Consensus       284 P~~Rps~~~~~  294 (708)
                      |++||+++++.
T Consensus       239 ~~~Rp~~~~i~  249 (257)
T cd05115         239 WEDRPNFAKVE  249 (257)
T ss_pred             hhhCcCHHHHH
Confidence            99999999876


No 223
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00  E-value=8.8e-40  Score=342.92  Aligned_cols=247  Identities=25%  Similarity=0.431  Sum_probs=211.2

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCc----EEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGK----EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~----~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  120 (708)
                      ..+|++++.||+|+||.||+|.+..+++    .||||++.... .....+.+.+|+.+++.++||||+++++++.. ...
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~   83 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STV   83 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCc
Confidence            4579999999999999999999888876    48999986543 33445678899999999999999999999875 457


Q ss_pred             EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         121 YLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      +++|||+++|+|.+++..+ +.+++.++..++.||+.||+|||+++|+||||||+|||+++++.+||+|||+++......
T Consensus        84 ~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~  163 (279)
T cd05109          84 QLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE  163 (279)
T ss_pred             EEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeeccccc
Confidence            8999999999999999764 569999999999999999999999999999999999999999999999999998664322


Q ss_pred             Cc---cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHH
Q psy2648         200 KL---DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCEN  274 (708)
Q Consensus       200 ~~---~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~  274 (708)
                      ..   ....+++.|+|||++.+..++ .++|||||||++|||++ |..||......++...+..+. ...|...+.++.+
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~-~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (279)
T cd05109         164 TEYHADGGKVPIKWMALESILHRRFT-HQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYM  242 (279)
T ss_pred             ceeecCCCccchhhCCHHHhccCCCC-chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHH
Confidence            11   122346789999999887775 78999999999999998 999999888887777776654 3445678899999


Q ss_pred             HHHHhhhhCCCCCCCHHHHh
Q psy2648         275 LLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +|.+||..||++||++.++.
T Consensus       243 li~~~l~~dp~~Rp~~~~l~  262 (279)
T cd05109         243 IMVKCWMIDSECRPRFRELV  262 (279)
T ss_pred             HHHHHcCCChhhCcCHHHHH
Confidence            99999999999999999877


No 224
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=8.3e-40  Score=347.90  Aligned_cols=252  Identities=28%  Similarity=0.458  Sum_probs=214.7

Q ss_pred             CCCccCCeEEEeEEcccCceEEEEEEEc-------CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEE
Q psy2648          41 DEPHIGKYKLLKTIGKGNFAKVKLAKHV-------PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQ  112 (708)
Q Consensus        41 ~~~~~~~Y~i~~~LG~G~fg~V~la~~~-------~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~  112 (708)
                      .+...++|.+.+.||+|+||.||+|++.       .++..||||++.... .....+.+.+|+.+++.+ +||||+++++
T Consensus        10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~   88 (304)
T cd05101          10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLG   88 (304)
T ss_pred             ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence            3455678999999999999999999863       234579999986542 334556788999999999 8999999999


Q ss_pred             EEEeCCEEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCE
Q psy2648         113 VIETEKTLYLVMEYASGGEVFDYLVLHG----------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL  176 (708)
Q Consensus       113 ~~~~~~~~ylVmEy~~gg~L~~~i~~~~----------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNI  176 (708)
                      ++.....+|+||||+++|+|.+++....                .++...+..++.||+.||.|||++||+||||||+||
T Consensus        89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  168 (304)
T cd05101          89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV  168 (304)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence            9999999999999999999999997642                467788899999999999999999999999999999


Q ss_pred             EEcCCCcEEEEeccCccccCCCC---CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHH
Q psy2648         177 LLDSEMNIKIADFGFSNEFTPGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRE  252 (708)
Q Consensus       177 Lld~~~~iKL~DFGls~~~~~~~---~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~  252 (708)
                      |++.++.+||+|||+++......   ......+++.|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..+
T Consensus       169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~~g~~p~~~~~~~~  247 (304)
T cd05101         169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE  247 (304)
T ss_pred             EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCC-chhhHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence            99999999999999987654322   12233456789999999887775 78999999999999998 899999999999


Q ss_pred             HHHHHHcCCC-CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         253 LRERVLRGKY-RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       253 l~~~i~~~~~-~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +.+.+..+.. ..|...+.++.+||.+||..+|.+||++.++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l  290 (304)
T cd05101         248 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLV  290 (304)
T ss_pred             HHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHH
Confidence            8888876542 35667889999999999999999999999876


No 225
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=100.00  E-value=4.5e-40  Score=345.46  Aligned_cols=247  Identities=32%  Similarity=0.522  Sum_probs=206.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++.+.||+|+||.||+|++..+++.||||++............+.+|+++++.++||||+++++++++.+.+|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            48999999999999999999999999999999876544344445788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccc
Q psy2648         127 ASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDT  203 (708)
Q Consensus       127 ~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~  203 (708)
                      +. ++|.+++...  ..+++..+..++.||+.||+|||+++|+||||||+||+++.++.+||+|||++....... ....
T Consensus        81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~  159 (284)
T cd07860          81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH  159 (284)
T ss_pred             cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence            96 5899888653  568999999999999999999999999999999999999999999999999987653321 2233


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-C-----------------CC--
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-K-----------------YR--  263 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-~-----------------~~--  263 (708)
                      ..+++.|+|||++.+....+.++|||||||++|+|++|+.||.+.+..+...++... .                 ..  
T Consensus       160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd07860         160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP  239 (284)
T ss_pred             ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence            467889999999877655457899999999999999999999876644332222210 0                 00  


Q ss_pred             ---------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         264 ---------IPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       264 ---------~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                               ....+++++.++|.+||+.||.+|||+++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l  279 (284)
T cd07860         240 KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAAL  279 (284)
T ss_pred             cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHh
Confidence                     1124678899999999999999999999876


No 226
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=100.00  E-value=3.4e-40  Score=342.79  Aligned_cols=247  Identities=26%  Similarity=0.469  Sum_probs=210.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC----hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN----PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYL  122 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~----~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~yl  122 (708)
                      +|+..+.||+|+||.||++....+++.||+|++......    ....+.+.+|+++++.++||||+++++++.+.+.+++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            488899999999999999999999999999999754422    1234678899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCC-cEEEEeccCccccCCCC--
Q psy2648         123 VMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGN--  199 (708)
Q Consensus       123 VmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~-~iKL~DFGls~~~~~~~--  199 (708)
                      ||||+++++|.+++...+.+++..+..++.||+.||.|||++|++||||||+||+++.++ .+||+|||++.......  
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~  160 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG  160 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence            999999999999998888899999999999999999999999999999999999998776 59999999987654321  


Q ss_pred             ---CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHHH--cCCCCCCCCCCHH
Q psy2648         200 ---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRE---LRERVL--RGKYRIPFYMSTD  271 (708)
Q Consensus       200 ---~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~---l~~~i~--~~~~~~p~~~s~~  271 (708)
                         ......|+..|+|||++.+..++ .++|||||||++|+|++|..||.......   ....+.  .....+|...+++
T Consensus       161 ~~~~~~~~~~~~~~~~PE~~~~~~~~-~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (268)
T cd06630         161 AGEFQGQLLGTIAFMAPEVLRGEQYG-RSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPG  239 (268)
T ss_pred             CCccccccccccceeCHhHhccCCCC-cccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHH
Confidence               11235688999999999877764 78999999999999999999997644322   222222  2234466678899


Q ss_pred             HHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         272 CENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       272 ~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +.++|.+||..||.+||++.++.
T Consensus       240 ~~~~i~~~l~~~p~~R~~~~~ll  262 (268)
T cd06630         240 LRDVTLRCLELQPEDRPPSRELL  262 (268)
T ss_pred             HHHHHHHHcCCCcccCcCHHHHh
Confidence            99999999999999999999876


No 227
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00  E-value=1.3e-39  Score=343.75  Aligned_cols=252  Identities=23%  Similarity=0.377  Sum_probs=211.7

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcC-----CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVP-----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE  117 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~-----tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~  117 (708)
                      ...++|++.+.||+|+||.||+|.++.     .+..||||.+..... ......+.+|+.+++.++||||+++++++...
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   81 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-LRERIEFLNEASVMKGFTCHHVVRLLGVVSKG   81 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            345689999999999999999997652     345899999865432 23344678899999999999999999999999


Q ss_pred             CEEEEEEeccCCCChHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEE
Q psy2648         118 KTLYLVMEYASGGEVFDYLVLHG----------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIA  187 (708)
Q Consensus       118 ~~~ylVmEy~~gg~L~~~i~~~~----------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~  187 (708)
                      ...|+||||+++|+|.+++...+          .++...+..++.||+.||.|||+++|+||||||+|||++.++.+||+
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~  161 (288)
T cd05061          82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIG  161 (288)
T ss_pred             CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEEC
Confidence            99999999999999999997532          24567888999999999999999999999999999999999999999


Q ss_pred             eccCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-C
Q psy2648         188 DFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-Y  262 (708)
Q Consensus       188 DFGls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~  262 (708)
                      |||+++.......   .....++..|+|||.+.+..++ .++|||||||++|+|++ |..||.+.+..++...+..+. .
T Consensus       162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~-~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~  240 (288)
T cd05061         162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFT-TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL  240 (288)
T ss_pred             cCCccccccccccccccCCCcccccccCHHHhccCCCC-hHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence            9999875432211   1223456789999999877764 79999999999999998 899999988888887777654 3


Q ss_pred             CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHhhh
Q psy2648         263 RIPFYMSTDCENLLKKFLVLNPAKRASLEVSGEV  296 (708)
Q Consensus       263 ~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~~~  296 (708)
                      ..|...++++.++|.+||+.||++|||+.++...
T Consensus       241 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  274 (288)
T cd05061         241 DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNL  274 (288)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            4566778999999999999999999999998843


No 228
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00  E-value=1e-39  Score=345.10  Aligned_cols=247  Identities=26%  Similarity=0.404  Sum_probs=212.5

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEc-----CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHV-----PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT  119 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~-----~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  119 (708)
                      .++|.+.+.||+|+||.||+|++.     .++..||+|.+....  ....+.+.+|+++++.++||||+++++++.....
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP   81 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence            457999999999999999999864     345679999886432  2334568899999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCc
Q psy2648         120 LYLVMEYASGGEVFDYLVLHG----------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN  183 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~----------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~  183 (708)
                      .++||||+++++|.+++..++                .+++..++.++.||+.||+|||++||+||||||+|||++.++.
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL  161 (291)
T ss_pred             eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence            999999999999999997643                3789999999999999999999999999999999999999999


Q ss_pred             EEEEeccCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHc
Q psy2648         184 IKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLR  259 (708)
Q Consensus       184 iKL~DFGls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~  259 (708)
                      +||+|||+++.......   .....+++.|+|||++.+..++ .++|||||||++|+|++ |..||...+..++.+.+..
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  240 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFT-TESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ  240 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC
Confidence            99999999875433221   2234567889999999887764 78999999999999998 9999998888888888877


Q ss_pred             CCCC-CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         260 GKYR-IPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       260 ~~~~-~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +... .+...+.++.++|.+||+.||.+||+++++.
T Consensus       241 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~  276 (291)
T cd05094         241 GRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIY  276 (291)
T ss_pred             CCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence            6553 4556788999999999999999999999887


No 229
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00  E-value=7.9e-40  Score=344.39  Aligned_cols=240  Identities=28%  Similarity=0.455  Sum_probs=199.8

Q ss_pred             EEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhh-HHHHHHHHHHHH---hCCCCCeeeEEEEEEeCCEEEEEEeccC
Q psy2648          53 TIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGS-LQKLFREVRIMK---MLDHPNIVKLFQVIETEKTLYLVMEYAS  128 (708)
Q Consensus        53 ~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~-~~~~~~Ei~il~---~l~HpnIv~l~~~~~~~~~~ylVmEy~~  128 (708)
                      .||+|+||.||++.+..+++.||||++.+....... ...+.+|..+++   ..+||||+.+++++..++.+|+||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            389999999999999999999999999876543222 223345544443   4579999999999999999999999999


Q ss_pred             CCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccccccCC
Q psy2648         129 GGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP  208 (708)
Q Consensus       129 gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~~Gt~  208 (708)
                      +++|.+++..++.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||++...... ......|++
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~  159 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KPHASVGTH  159 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc-CccCcCCCc
Confidence            9999999988889999999999999999999999999999999999999999999999999998755332 223457999


Q ss_pred             cccccccccC-CccCCCchhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCC
Q psy2648         209 PYAAPELFQG-KKYDGPEVDVWSLGVILYTLVSGSLPFDGS---TLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNP  284 (708)
Q Consensus       209 ~Y~APE~l~~-~~~~~~~~DIWSlGvilyelltG~~Pf~~~---~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP  284 (708)
                      .|+|||++.. ..+ +.++|||||||++|+|++|..||...   ....+.+........+|...++++.++|++||..||
T Consensus       160 ~y~aPE~~~~~~~~-~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  238 (279)
T cd05633         160 GYMAPEVLQKGTAY-DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDV  238 (279)
T ss_pred             CccCHHHhcCCCCC-CchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCH
Confidence            9999999864 444 47899999999999999999999753   333444444444556777889999999999999999


Q ss_pred             CCCC-----CHHHHh
Q psy2648         285 AKRA-----SLEVSG  294 (708)
Q Consensus       285 ~~Rp-----s~~~~~  294 (708)
                      .+|+     +++++.
T Consensus       239 ~~R~~~~~~~~~~~~  253 (279)
T cd05633         239 SKRLGCLGRGAQEVK  253 (279)
T ss_pred             HHhcCCCCCCHHHHH
Confidence            9999     477665


No 230
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00  E-value=4.8e-40  Score=347.38  Aligned_cols=250  Identities=30%  Similarity=0.470  Sum_probs=210.0

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--CEEE
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE--KTLY  121 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~y  121 (708)
                      .+++|++.+.||+|+||.||+|.+..+++.||||.++...........+.+|+.+++.++||||+++++++...  ..+|
T Consensus         3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (293)
T cd07843           3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY   82 (293)
T ss_pred             chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence            35689999999999999999999999999999999976544433344567899999999999999999998877  8999


Q ss_pred             EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-C
Q psy2648         122 LVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-N  199 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~  199 (708)
                      |||||+.+ +|.+++.... .+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++...... .
T Consensus        83 lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  161 (293)
T cd07843          83 MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK  161 (293)
T ss_pred             EEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence            99999985 8999887654 5899999999999999999999999999999999999999999999999998765433 2


Q ss_pred             CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC------------------
Q psy2648         200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK------------------  261 (708)
Q Consensus       200 ~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~------------------  261 (708)
                      ......+++.|+|||.+.+....+.++|||||||++|+|++|..||...+..+...++....                  
T Consensus       162 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (293)
T cd07843         162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAK  241 (293)
T ss_pred             ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhc
Confidence            33445678899999998765544578999999999999999999999877665554443210                  


Q ss_pred             -------------CCCCCC-CCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         262 -------------YRIPFY-MSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       262 -------------~~~p~~-~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                   ..+|.. +++.+.+||++||+.||++|||+++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell  288 (293)
T cd07843         242 KKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDAL  288 (293)
T ss_pred             ccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHh
Confidence                         012222 578899999999999999999999876


No 231
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00  E-value=8.4e-40  Score=343.74  Aligned_cols=246  Identities=25%  Similarity=0.415  Sum_probs=211.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEc-----CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHV-----PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~-----~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  120 (708)
                      .+|.+.++||+|+||.||+|...     .++..||+|.+...  .....+.+.+|+++++.++||||+++++++.....+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPL   82 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCce
Confidence            46889999999999999999743     35678999988643  234456788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEE
Q psy2648         121 YLVMEYASGGEVFDYLVLHG---------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIK  185 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~---------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iK  185 (708)
                      |+||||+++++|.+++...+               .+++..+..++.||+.||+|||++||+||||||+|||+++++.+|
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~k  162 (280)
T cd05092          83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVK  162 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEE
Confidence            99999999999999997653               478899999999999999999999999999999999999999999


Q ss_pred             EEeccCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC
Q psy2648         186 IADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK  261 (708)
Q Consensus       186 L~DFGls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~  261 (708)
                      |+|||+++.......   .....+++.|+|||++.+..++ .++|||||||++|+|++ |..||......+....+..+.
T Consensus       163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~  241 (280)
T cd05092         163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT-TESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGR  241 (280)
T ss_pred             ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcC-chhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCc
Confidence            999999875532221   1223456789999999888775 78999999999999998 999998888777777776664


Q ss_pred             -CCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         262 -YRIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       262 -~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                       ...|...++++.+||.+||+.||.+||+++++.
T Consensus       242 ~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~  275 (280)
T cd05092         242 ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIH  275 (280)
T ss_pred             cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence             345667889999999999999999999999876


No 232
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00  E-value=1.1e-39  Score=343.01  Aligned_cols=247  Identities=26%  Similarity=0.428  Sum_probs=208.7

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcE----EEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKE----VAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~----vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  120 (708)
                      .++|++++.||+|+||.||+|.+..+++.    ||+|.+... ........+..|+.+++.++||||+++++++. ....
T Consensus         6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~   83 (279)
T cd05111           6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASL   83 (279)
T ss_pred             HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCcc
Confidence            35799999999999999999999888874    666766432 12234456778888999999999999999875 4567


Q ss_pred             EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         121 YLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      ++||||+++|+|.+++... +.+++..+..++.||+.||+|||+++++||||||+|||++.++.+||+|||+++......
T Consensus        84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~  163 (279)
T cd05111          84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD  163 (279)
T ss_pred             EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence            8999999999999999764 568999999999999999999999999999999999999999999999999997654332


Q ss_pred             C---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHH
Q psy2648         200 K---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCEN  274 (708)
Q Consensus       200 ~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~-~~p~~~s~~~~~  274 (708)
                      .   .....++..|+|||++.+..++ .++|||||||++|||++ |..||.+....++.+.+..+.. ..|...+.++.+
T Consensus       164 ~~~~~~~~~~~~~y~~pE~~~~~~~~-~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (279)
T cd05111         164 KKYFYSEHKTPIKWMALESILFGRYT-HQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYM  242 (279)
T ss_pred             cccccCCCCCcccccCHHHhccCCcC-chhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHHHH
Confidence            1   2334577789999999877775 79999999999999998 9999999888877777766643 345566789999


Q ss_pred             HHHHhhhhCCCCCCCHHHHh
Q psy2648         275 LLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ++.+||..||++|||++++.
T Consensus       243 li~~c~~~~p~~Rps~~el~  262 (279)
T cd05111         243 VMVKCWMIDENVRPTFKELA  262 (279)
T ss_pred             HHHHHcCCCcccCcCHHHHH
Confidence            99999999999999999887


No 233
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00  E-value=3.9e-40  Score=342.93  Aligned_cols=244  Identities=33%  Similarity=0.557  Sum_probs=206.2

Q ss_pred             EEEeEEcccCceEEEEEEEc----CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          49 KLLKTIGKGNFAKVKLAKHV----PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        49 ~i~~~LG~G~fg~V~la~~~----~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ++.+.||.|+||.||+|.+.    ..+..|+||+++. .......+.+.+|+++|++++||||+++++++...+.+++||
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~   80 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM   80 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeecccccccccccccccccccccccccccccc
Confidence            57889999999999999988    4567899999954 334455778999999999999999999999999888899999


Q ss_pred             eccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC--
Q psy2648         125 EYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--  200 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~--  200 (708)
                      |||++|+|.++|...  ..+++.....++.||+.||.|||+++|+|+||+++|||++.++.+||+|||++........  
T Consensus        81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~  160 (259)
T PF07714_consen   81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK  160 (259)
T ss_dssp             E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999987  6799999999999999999999999999999999999999999999999999876632221  


Q ss_pred             -ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHH
Q psy2648         201 -LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCENLLK  277 (708)
Q Consensus       201 -~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~-~~p~~~s~~~~~Li~  277 (708)
                       .....+...|+|||.+.+..++ .++||||||+++|||++ |+.||.+.+..++..++..+.. ..|..++.++.++|.
T Consensus       161 ~~~~~~~~~~~~aPE~~~~~~~~-~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  239 (259)
T PF07714_consen  161 NDSSQQLPLRYLAPEVLKDGEYT-KKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQ  239 (259)
T ss_dssp             ESTTSESGGGGS-HHHHHHSEES-HHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHH
T ss_pred             ccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccceeccchhHHHHHHHH
Confidence             1234567789999999887764 89999999999999999 7899999999998888876643 356678999999999


Q ss_pred             HhhhhCCCCCCCHHHHh
Q psy2648         278 KFLVLNPAKRASLEVSG  294 (708)
Q Consensus       278 ~~L~~dP~~Rps~~~~~  294 (708)
                      +||..||.+||+++++.
T Consensus       240 ~C~~~~p~~RPs~~~i~  256 (259)
T PF07714_consen  240 QCWSHDPEKRPSFQEIL  256 (259)
T ss_dssp             HHT-SSGGGS--HHHHH
T ss_pred             HHcCCChhhCcCHHHHH
Confidence            99999999999999875


No 234
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00  E-value=1e-39  Score=338.62  Aligned_cols=245  Identities=28%  Similarity=0.476  Sum_probs=209.5

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      ..++|++.+.||+|+||.||+|.+. .+..||+|.+......   .+.+.+|+.+++.++||||+++++++. ....|+|
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv   78 (260)
T cd05070           4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIV   78 (260)
T ss_pred             chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEE
Confidence            3467999999999999999999765 5677999998765443   345889999999999999999999885 4568999


Q ss_pred             EeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc
Q psy2648         124 MEYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL  201 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~  201 (708)
                      |||+++++|.+++...  ..+++..++.++.||+.||.|||+++|+||||||+|||+++++.+||+|||++..+......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05070          79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence            9999999999998764  35899999999999999999999999999999999999999999999999999765432211


Q ss_pred             --cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHH
Q psy2648         202 --DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYMSTDCENLLK  277 (708)
Q Consensus       202 --~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~p~~~s~~~~~Li~  277 (708)
                        ....++..|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..++...+..+ ..+.|...+.++.+||.
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  237 (260)
T cd05070         159 ARQGAKFPIKWTAPEAALYGRFT-IKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELML  237 (260)
T ss_pred             cccCCCCCccccChHHHhcCCCc-chhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHH
Confidence              123355679999998877764 78999999999999999 99999998888888777655 34566678899999999


Q ss_pred             HhhhhCCCCCCCHHHHh
Q psy2648         278 KFLVLNPAKRASLEVSG  294 (708)
Q Consensus       278 ~~L~~dP~~Rps~~~~~  294 (708)
                      +||.+||++|||++++.
T Consensus       238 ~~l~~~p~~Rpt~~~l~  254 (260)
T cd05070         238 QCWKKDPEERPTFEYLQ  254 (260)
T ss_pred             HHcccCcccCcCHHHHH
Confidence            99999999999999876


No 235
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00  E-value=8.1e-40  Score=347.28  Aligned_cols=252  Identities=29%  Similarity=0.522  Sum_probs=204.0

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC---
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK---  118 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~---  118 (708)
                      ...+++|++.+.||+|+||.||+|.+..+++.||||++............+.+|+++++.++||||+++++++....   
T Consensus         8 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   87 (310)
T cd07865           8 CDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPY   87 (310)
T ss_pred             cchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccc
Confidence            34577999999999999999999999999999999998754333333345678999999999999999999987653   


Q ss_pred             -----EEEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCc
Q psy2648         119 -----TLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS  192 (708)
Q Consensus       119 -----~~ylVmEy~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls  192 (708)
                           ..|+||||+.+ +|.+++.... .+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        88 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~  166 (310)
T cd07865          88 NRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLA  166 (310)
T ss_pred             cCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence                 46999999975 7888776543 6899999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCC-----CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc--CC----
Q psy2648         193 NEFTPGN-----KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR--GK----  261 (708)
Q Consensus       193 ~~~~~~~-----~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~--~~----  261 (708)
                      .......     ......++..|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+..  +.    
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (310)
T cd07865         167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE  246 (310)
T ss_pred             ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence            7653221     123456788999999987654335789999999999999999999988765543332221  10    


Q ss_pred             -------------CCCC-------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         262 -------------YRIP-------------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       262 -------------~~~p-------------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                   ..+|             ...++.+.+||.+||..||.+|||+++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l  305 (310)
T cd07865         247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTAL  305 (310)
T ss_pred             hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHh
Confidence                         0011             12356788999999999999999999876


No 236
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00  E-value=3.6e-40  Score=357.08  Aligned_cols=247  Identities=27%  Similarity=0.465  Sum_probs=204.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEc-----CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeC-C
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHV-----PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIETE-K  118 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~-----~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~-~  118 (708)
                      ++|++.+.||+|+||.||+|.+.     .+++.||+|++.... .....+.+.+|+.+++++ +||||+++++++... .
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~   85 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG   85 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence            47999999999999999999754     456889999987543 234456788999999999 899999999987654 5


Q ss_pred             EEEEEEeccCCCChHHHHHHc-----------------------------------------------------------
Q psy2648         119 TLYLVMEYASGGEVFDYLVLH-----------------------------------------------------------  139 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~-----------------------------------------------------------  139 (708)
                      .+|++|||+++++|.++|...                                                           
T Consensus        86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (337)
T cd05054          86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL  165 (337)
T ss_pred             CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence            789999999999999998642                                                           


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC---ccccccCCcccccc
Q psy2648         140 --GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPE  214 (708)
Q Consensus       140 --~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~---~~~~~Gt~~Y~APE  214 (708)
                        ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+.....   .....++..|+|||
T Consensus       166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  245 (337)
T cd05054         166 YKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  245 (337)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence              2578889999999999999999999999999999999999999999999999976532211   12334567899999


Q ss_pred             cccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHH-HHHHHHcCC-CCCCCCCCHHHHHHHHHhhhhCCCCCCCHH
Q psy2648         215 LFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRE-LRERVLRGK-YRIPFYMSTDCENLLKKFLVLNPAKRASLE  291 (708)
Q Consensus       215 ~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~-l~~~i~~~~-~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~  291 (708)
                      ++.+..++ .++|||||||+||+|++ |..||.+....+ +...+..+. ...|...++++.+++.+||+.+|++||+++
T Consensus       246 ~~~~~~~~-~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~  324 (337)
T cd05054         246 SIFDKVYT-TQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFS  324 (337)
T ss_pred             HhcCCCCC-ccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHH
Confidence            99888875 78999999999999997 999998754433 334444432 234667789999999999999999999999


Q ss_pred             HHh
Q psy2648         292 VSG  294 (708)
Q Consensus       292 ~~~  294 (708)
                      ++.
T Consensus       325 ell  327 (337)
T cd05054         325 ELV  327 (337)
T ss_pred             HHH
Confidence            887


No 237
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00  E-value=1.4e-39  Score=341.99  Aligned_cols=248  Identities=29%  Similarity=0.421  Sum_probs=201.2

Q ss_pred             CCe-EEEeEEcccCceEEEEEE----EcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--C
Q psy2648          46 GKY-KLLKTIGKGNFAKVKLAK----HVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE--K  118 (708)
Q Consensus        46 ~~Y-~i~~~LG~G~fg~V~la~----~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~  118 (708)
                      ++| ++++.||+|+||+||++.    ...+++.||+|++.... .......+.+|+++|+.++||||+++++++...  .
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   81 (283)
T cd05080           3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK   81 (283)
T ss_pred             hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence            456 999999999999998865    34578899999987542 233456688999999999999999999987653  4


Q ss_pred             EEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC
Q psy2648         119 TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG  198 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~  198 (708)
                      .+|+||||+++++|.+++.. ..+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....+
T Consensus        82 ~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~  160 (283)
T cd05080          82 GLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG  160 (283)
T ss_pred             eEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCc
Confidence            68999999999999999865 46999999999999999999999999999999999999999999999999998765433


Q ss_pred             CC----ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHH---------------HHHHHHHc
Q psy2648         199 NK----LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLR---------------ELRERVLR  259 (708)
Q Consensus       199 ~~----~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~---------------~l~~~i~~  259 (708)
                      ..    .....++..|+|||++.+..++ .++|||||||++|+|++|..||......               .+.+.+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~-~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd05080         161 HEYYRVREDGDSPVFWYAVECLKENKFS-YASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLER  239 (283)
T ss_pred             chhhccCCCCCCCceeeCHhHhcccCCC-cccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhc
Confidence            21    1223456679999999877664 7999999999999999999998653211               11111111


Q ss_pred             C-CCCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHhhh
Q psy2648         260 G-KYRIPFYMSTDCENLLKKFLVLNPAKRASLEVSGEV  296 (708)
Q Consensus       260 ~-~~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~~~  296 (708)
                      + ....|...+.++.+++.+||..||++|||++++.+.
T Consensus       240 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~  277 (283)
T cd05080         240 GMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPI  277 (283)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            1 123355678899999999999999999999998753


No 238
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00  E-value=1.1e-39  Score=344.34  Aligned_cols=246  Identities=28%  Similarity=0.446  Sum_probs=210.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcC-----CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVP-----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~-----tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~y  121 (708)
                      +|++.+.||+|+||.||+|.+..     ....||+|.+.... .....+.+.+|+.+++.++||||+++++.+...+..|
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   79 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL   79 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence            58899999999999999998753     33679999886543 2344567889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEE
Q psy2648         122 LVMEYASGGEVFDYLVLH------------------------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL  177 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~------------------------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNIL  177 (708)
                      +||||+.+++|.+++...                        ..+++..+..++.||+.||+|||+++|+||||||+|||
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nil  159 (290)
T cd05045          80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVL  159 (290)
T ss_pred             EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence            999999999999998642                        24778889999999999999999999999999999999


Q ss_pred             EcCCCcEEEEeccCccccCCCC---CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHH
Q psy2648         178 LDSEMNIKIADFGFSNEFTPGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLREL  253 (708)
Q Consensus       178 ld~~~~iKL~DFGls~~~~~~~---~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l  253 (708)
                      +++++.+||+|||+++......   .....+++..|+|||++.+..++ .++|||||||++|+|++ |..||.+....++
T Consensus       160 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~-~~~Di~slG~~l~el~t~g~~p~~~~~~~~~  238 (290)
T cd05045         160 VAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIVTLGGNPYPGIAPERL  238 (290)
T ss_pred             EcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcc-hHhHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence            9999999999999987543221   12234567789999999877764 78999999999999998 9999999888888


Q ss_pred             HHHHHcC-CCCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         254 RERVLRG-KYRIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       254 ~~~i~~~-~~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .+.+..+ ....|...+.++.++|.+||+.||.+||+++++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~  280 (290)
T cd05045         239 FNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADIS  280 (290)
T ss_pred             HHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHH
Confidence            8777654 3345677889999999999999999999999887


No 239
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00  E-value=9.2e-40  Score=339.82  Aligned_cols=248  Identities=30%  Similarity=0.497  Sum_probs=208.4

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCC----
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIETEK----  118 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~----  118 (708)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++.....   ..+.+.+|+.+++.+ +||||+++++++....    
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN   80 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence            35899999999999999999999999999999999875432   345688999999998 7999999999997644    


Q ss_pred             --EEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCc
Q psy2648         119 --TLYLVMEYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS  192 (708)
Q Consensus       119 --~~ylVmEy~~gg~L~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls  192 (708)
                        .+|+||||+++++|.+++..    ...+++..++.++.||+.||+|||+++|+|+||+|+||+++.++.+||+|||++
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~  160 (275)
T cd06608          81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS  160 (275)
T ss_pred             ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence              58999999999999998865    357899999999999999999999999999999999999999999999999998


Q ss_pred             cccCCC-CCccccccCCcccccccccCCc----cCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC---C
Q psy2648         193 NEFTPG-NKLDTFCGSPPYAAPELFQGKK----YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR---I  264 (708)
Q Consensus       193 ~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~----~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~---~  264 (708)
                      ...... .......|++.|+|||++....    ..+.++|||||||+||+|++|..||...........+..+...   .
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  240 (275)
T cd06608         161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKS  240 (275)
T ss_pred             eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCc
Confidence            654322 2234567899999999986432    1236899999999999999999999876655555555554321   2


Q ss_pred             CCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         265 PFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       265 p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +...+.++.+||++||..||++|||++++.
T Consensus       241 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll  270 (275)
T cd06608         241 PENWSKKFNDFISECLIKNYEQRPFMEELL  270 (275)
T ss_pred             hhhcCHHHHHHHHHHhhcChhhCcCHHHHh
Confidence            334678999999999999999999999876


No 240
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00  E-value=1.4e-39  Score=336.84  Aligned_cols=241  Identities=32%  Similarity=0.525  Sum_probs=208.1

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEE-EeCCEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVI-ETEKTLYLV  123 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~-~~~~~~ylV  123 (708)
                      ..+|++.+.||+|+||.||++..  .++.||+|.+....    ..+.+.+|+.+++.++||||+++++++ .....+|+|
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv   78 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV   78 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence            45799999999999999999976  47889999986432    245688999999999999999999975 455679999


Q ss_pred             EeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc
Q psy2648         124 MEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL  201 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~  201 (708)
                      |||+++++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+||++++++.+||+|||+++.....  .
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~--~  156 (256)
T cd05082          79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--Q  156 (256)
T ss_pred             EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecccc--C
Confidence            99999999999997654  3789999999999999999999999999999999999999999999999998754322  2


Q ss_pred             cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHh
Q psy2648         202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLLKKF  279 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~~~  279 (708)
                      ....++..|+|||++.+..++ .++|||||||++|+|++ |..||...+..++...+..+. ...+...++.+.++|.+|
T Consensus       157 ~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  235 (256)
T cd05082         157 DTGKLPVKWTAPEALREKKFS-TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQC  235 (256)
T ss_pred             CCCccceeecCHHHHccCCCC-chhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            334556789999999887764 78999999999999997 999999988888888776652 345567889999999999


Q ss_pred             hhhCCCCCCCHHHHh
Q psy2648         280 LVLNPAKRASLEVSG  294 (708)
Q Consensus       280 L~~dP~~Rps~~~~~  294 (708)
                      |..||++|||++++.
T Consensus       236 l~~~p~~Rpt~~~l~  250 (256)
T cd05082         236 WHLDAATRPSFLQLR  250 (256)
T ss_pred             hcCChhhCcCHHHHH
Confidence            999999999999876


No 241
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00  E-value=9.6e-40  Score=342.53  Aligned_cols=246  Identities=29%  Similarity=0.491  Sum_probs=213.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ..|+.++.||+|+||.||+|.+..+++.||||++..... ....+.+.+|+.+++.++||||+++++++.+...+|+|||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME   82 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence            358889999999999999999999999999999875532 3445678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Ccccc
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~~  204 (708)
                      |+++++|.+++. .+.+++.++..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++....... .....
T Consensus        83 ~~~~~~L~~~i~-~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  161 (277)
T cd06640          83 YLGGGSALDLLR-AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF  161 (277)
T ss_pred             cCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccc
Confidence            999999999886 4679999999999999999999999999999999999999999999999999987654322 22335


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHhhhhC
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLLKKFLVLN  283 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~~~L~~d  283 (708)
                      .++..|+|||++.+..++ .++|+|||||++|+|++|..||...+.......+..+. ..++...+.++.++|.+||..|
T Consensus       162 ~~~~~y~apE~~~~~~~~-~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  240 (277)
T cd06640         162 VGTPFWMAPEVIQQSAYD-SKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKD  240 (277)
T ss_pred             cCcccccCHhHhccCCCc-cHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccC
Confidence            688899999999877664 78999999999999999999999887776665554442 2344567789999999999999


Q ss_pred             CCCCCCHHHHh
Q psy2648         284 PAKRASLEVSG  294 (708)
Q Consensus       284 P~~Rps~~~~~  294 (708)
                      |++||+++++.
T Consensus       241 p~~Rp~~~~il  251 (277)
T cd06640         241 PSFRPTAKELL  251 (277)
T ss_pred             cccCcCHHHHH
Confidence            99999999987


No 242
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00  E-value=3.9e-40  Score=341.37  Aligned_cols=246  Identities=24%  Similarity=0.416  Sum_probs=213.4

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      -.+|++++.||.|+||.||+|.+.. ++.||+|++.....  .....+.+|+.+++.++||||+++++++.....+|+||
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL--LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT   81 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch--hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence            3469999999999999999999987 88999999876532  23456889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC-c
Q psy2648         125 EYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-L  201 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~-~  201 (708)
                      ||+++++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ .
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~  161 (261)
T cd05148          82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLS  161 (261)
T ss_pred             eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccc
Confidence            999999999999753  4589999999999999999999999999999999999999999999999999876543221 1


Q ss_pred             cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHh
Q psy2648         202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYMSTDCENLLKKF  279 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~p~~~s~~~~~Li~~~  279 (708)
                      ....++..|+|||++.+..++ .++|||||||++|+|++ |+.||.+.+..++...+..+ ....|...++++.++|.+|
T Consensus       162 ~~~~~~~~~~~PE~~~~~~~~-~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  240 (261)
T cd05148         162 SDKKIPYKWTAPEAASHGTFS-TKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLEC  240 (261)
T ss_pred             cCCCCceEecCHHHHccCCCC-chhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHH
Confidence            233456789999999877764 78999999999999998 89999998888887777755 3345667889999999999


Q ss_pred             hhhCCCCCCCHHHHh
Q psy2648         280 LVLNPAKRASLEVSG  294 (708)
Q Consensus       280 L~~dP~~Rps~~~~~  294 (708)
                      |..||++|||+.++.
T Consensus       241 l~~~p~~Rpt~~~l~  255 (261)
T cd05148         241 WAAEPEDRPSFKALR  255 (261)
T ss_pred             cCCCchhCcCHHHHH
Confidence            999999999999876


No 243
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=100.00  E-value=7.4e-40  Score=337.62  Aligned_cols=244  Identities=32%  Similarity=0.519  Sum_probs=211.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+....    ..+.+.+|+++++.++||||+++++++.+...+|++||
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e   78 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME   78 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence            57999999999999999999999999999999986432    25678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccc
Q psy2648         126 YASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDT  203 (708)
Q Consensus       126 y~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~  203 (708)
                      |+++++|.+++... ..+++.+++.++.||+.||.|||+.+|+||||+|+||+++.++.+||+|||++....... ....
T Consensus        79 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (256)
T cd06612          79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT  158 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccccc
Confidence            99999999998764 568999999999999999999999999999999999999999999999999987654433 2334


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHhh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK---YRIPFYMSTDCENLLKKFL  280 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~---~~~p~~~s~~~~~Li~~~L  280 (708)
                      ..|+..|+|||++.+..++ .++|||||||++|+|++|+.||...+..+....+....   ...|...+.++.++|.+||
T Consensus       159 ~~~~~~y~~PE~~~~~~~~-~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  237 (256)
T cd06612         159 VIGTPFWMAPEVIQEIGYN-NKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCL  237 (256)
T ss_pred             ccCCccccCHHHHhcCCCC-chhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHH
Confidence            5688999999999888764 78999999999999999999998776555444433221   2234456789999999999


Q ss_pred             hhCCCCCCCHHHHh
Q psy2648         281 VLNPAKRASLEVSG  294 (708)
Q Consensus       281 ~~dP~~Rps~~~~~  294 (708)
                      +.||.+|||+++++
T Consensus       238 ~~~P~~Rps~~~il  251 (256)
T cd06612         238 VKDPEERPSAIQLL  251 (256)
T ss_pred             hcChhhCcCHHHHh
Confidence            99999999999876


No 244
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00  E-value=5.4e-40  Score=345.69  Aligned_cols=247  Identities=28%  Similarity=0.495  Sum_probs=211.4

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ..+|++++.||+|+||.||++.+..+++.||+|++.... .....+.+.+|+++++.++||||+++++.+.....+|+||
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM   82 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence            457999999999999999999999999999999987543 2334567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT  203 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~-~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~  203 (708)
                      ||+++++|.+++...+.+++..++.++.|++.||.|||+ ++|+||||||+||++++++.++|+|||++..... .....
T Consensus        83 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~-~~~~~  161 (284)
T cd06620          83 EFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN-SIADT  161 (284)
T ss_pred             ecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhh-hccCc
Confidence            999999999999888889999999999999999999997 6999999999999999999999999999865432 22345


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCH-----------HHHHHHHHcCC-CCCCCC-CCH
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTL-----------RELRERVLRGK-YRIPFY-MST  270 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~-----------~~l~~~i~~~~-~~~p~~-~s~  270 (708)
                      .+|+..|+|||++.+..++ .++|||||||++|+|++|..||.....           .++...+.... ..++.. .+.
T Consensus       162 ~~~~~~~~aPE~~~~~~~~-~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd06620         162 FVGTSTYMSPERIQGGKYT-VKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPE  240 (284)
T ss_pred             cccCcccCCHHHHccCCCC-ccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCH
Confidence            6899999999999877654 789999999999999999999986543           13333443332 223333 678


Q ss_pred             HHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         271 DCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       271 ~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ++.+||.+||..||++|||++++.
T Consensus       241 ~~~~li~~~l~~dp~~Rpt~~e~~  264 (284)
T cd06620         241 DLRDFVDACLLKDPTERPTPQQLC  264 (284)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHh
Confidence            899999999999999999999877


No 245
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00  E-value=1.2e-39  Score=335.70  Aligned_cols=246  Identities=32%  Similarity=0.568  Sum_probs=221.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++.+.||+|+||.||++.+..+++.||||.+.+..........+.+|+++++.++||||+++++++.+....|+||||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            58999999999999999999999999999999987665555667788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcc
Q psy2648         127 ASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD  202 (708)
Q Consensus       127 ~~gg~L~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~  202 (708)
                      +++++|.+++..    ...+++..+..++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++...... ...
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-~~~  159 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-MAK  159 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-Ccc
Confidence            999999999866    356899999999999999999999999999999999999999999999999998765443 334


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHhhh
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR-IPFYMSTDCENLLKKFLV  281 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~-~p~~~s~~~~~Li~~~L~  281 (708)
                      ...+++.|+|||.+.+..++ .++|+||||+++|+|++|+.||...+..++...+..+.+. .+...+.++.++|.+||.
T Consensus       160 ~~~~~~~~~~Pe~~~~~~~~-~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (256)
T cd08530         160 TQIGTPHYMAPEVWKGRPYS-YKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQ  238 (256)
T ss_pred             cccCCccccCHHHHCCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcC
Confidence            46789999999999887764 7899999999999999999999999988888888777653 556788999999999999


Q ss_pred             hCCCCCCCHHHHh
Q psy2648         282 LNPAKRASLEVSG  294 (708)
Q Consensus       282 ~dP~~Rps~~~~~  294 (708)
                      .||++||+++++.
T Consensus       239 ~~p~~Rp~~~~~l  251 (256)
T cd08530         239 VKPKLRPNCDKIL  251 (256)
T ss_pred             CCcccCCCHHHHh
Confidence            9999999998765


No 246
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=100.00  E-value=1.4e-39  Score=343.28  Aligned_cols=249  Identities=31%  Similarity=0.534  Sum_probs=202.0

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      .+++|++.+.||+|+||.||+|.++.+++.||||.+...... .....+.+|+++++.++||||+++++++.+++..|+|
T Consensus         3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (291)
T cd07844           3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV   81 (291)
T ss_pred             CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence            357899999999999999999999999999999998754322 1223467899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC-CCCc
Q psy2648         124 MEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKL  201 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~-~~~~  201 (708)
                      |||+.+ +|.+++... ..+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++..... ....
T Consensus        82 ~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~  160 (291)
T cd07844          82 FEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY  160 (291)
T ss_pred             EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccc
Confidence            999985 999988765 4689999999999999999999999999999999999999999999999999865322 1122


Q ss_pred             cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHcC-------------------C
Q psy2648         202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST-LRELRERVLRG-------------------K  261 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~-~~~l~~~i~~~-------------------~  261 (708)
                      ....+++.|+|||++.+....+.++|||||||++|+|++|..||.+.+ ..+....+...                   .
T Consensus       161 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (291)
T cd07844         161 SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKP  240 (291)
T ss_pred             cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccc
Confidence            234578899999998764433578999999999999999999997665 22222222110                   0


Q ss_pred             CCCC-----------CCCC--HHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         262 YRIP-----------FYMS--TDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       262 ~~~p-----------~~~s--~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ...+           ..++  .++.++|.+||+.||++|||+++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l  286 (291)
T cd07844         241 YSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAM  286 (291)
T ss_pred             ccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHh
Confidence            0000           1233  7889999999999999999999876


No 247
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=100.00  E-value=2.3e-39  Score=337.19  Aligned_cols=248  Identities=25%  Similarity=0.387  Sum_probs=211.3

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCc---EEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGK---EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~---~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~y  121 (708)
                      ..+|+..+.||+|+||.||+|.+..+++   .||||.+.... .....+.+..|+++++.++||||+++++++...+.+|
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM   82 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence            4578999999999999999999876665   79999986543 2344567889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q psy2648         122 LVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK  200 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~  200 (708)
                      +||||+++++|.+++..+ +.+++.++..++.|++.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus        83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~  162 (268)
T cd05063          83 IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE  162 (268)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccc
Confidence            999999999999998764 5789999999999999999999999999999999999999999999999999876532211


Q ss_pred             c--c--ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHH
Q psy2648         201 L--D--TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCEN  274 (708)
Q Consensus       201 ~--~--~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~  274 (708)
                      .  .  ....++.|+|||++.+..++ .++|||||||++|+|++ |..||...+..++...+..+. .+.+...+.++.+
T Consensus       163 ~~~~~~~~~~~~~y~~PE~~~~~~~~-~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  241 (268)
T cd05063         163 GTYTTSGGKIPIRWTAPEAIAYRKFT-SASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQ  241 (268)
T ss_pred             cceeccCCCcCceecCHHHhhcCCcC-hHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHHH
Confidence            1  1  11234579999999877764 78999999999999997 999999888888877776552 2334457889999


Q ss_pred             HHHHhhhhCCCCCCCHHHHh
Q psy2648         275 LLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ++.+||..||++||+++++.
T Consensus       242 li~~c~~~~p~~Rp~~~~i~  261 (268)
T cd05063         242 LMLQCWQQDRARRPRFVDIV  261 (268)
T ss_pred             HHHHHcCCCcccCcCHHHHH
Confidence            99999999999999999876


No 248
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00  E-value=1.5e-39  Score=341.84  Aligned_cols=250  Identities=30%  Similarity=0.455  Sum_probs=206.1

Q ss_pred             CCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEE----
Q psy2648          41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIE----  115 (708)
Q Consensus        41 ~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~----  115 (708)
                      -....++|++.+.||+|+||.||+|.+..+++.||||++.....   ....+.+|+.+++.+ +||||+++++++.    
T Consensus        13 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~   89 (286)
T cd06638          13 FPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD---IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDV   89 (286)
T ss_pred             CCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc---hHHHHHHHHHHHHHHhcCCCeeeeeeeeeeccc
Confidence            34456789999999999999999999999999999999865321   234577899999999 6999999999873    


Q ss_pred             -eCCEEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEecc
Q psy2648         116 -TEKTLYLVMEYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFG  190 (708)
Q Consensus       116 -~~~~~ylVmEy~~gg~L~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFG  190 (708)
                       ....+|+||||+++++|.+++..    ...+++..+..++.||+.||.|||+++|+||||||+||+++.++.+||+|||
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg  169 (286)
T cd06638          90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFG  169 (286)
T ss_pred             CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCC
Confidence             44679999999999999988753    3568999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCC-CccccccCCcccccccccC-----CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC--
Q psy2648         191 FSNEFTPGN-KLDTFCGSPPYAAPELFQG-----KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY--  262 (708)
Q Consensus       191 ls~~~~~~~-~~~~~~Gt~~Y~APE~l~~-----~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~--  262 (708)
                      ++....... ......|++.|+|||++..     ..+ +.++|||||||++|+|++|..||...+.......+.....  
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~-~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~  248 (286)
T cd06638         170 VSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTY-DARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPT  248 (286)
T ss_pred             ceeecccCCCccccccCCCcccChhhhchhhhccccc-cchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCc
Confidence            987654322 2334579999999999853     234 4689999999999999999999987765444333333221  


Q ss_pred             -CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         263 -RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       263 -~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                       ..|...+.++.+||.+||..||++||+++++.
T Consensus       249 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell  281 (286)
T cd06638         249 LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLL  281 (286)
T ss_pred             ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHh
Confidence             23445678999999999999999999999876


No 249
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00  E-value=1.4e-39  Score=343.05  Aligned_cols=251  Identities=27%  Similarity=0.440  Sum_probs=214.3

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEc-----CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHV-----PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK  118 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~-----~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~  118 (708)
                      ..++|++.+.||+|+||.||+|.+.     .++..||||++.... .......+.+|+.+++.++||||+++++++....
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~   81 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK   81 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence            3467999999999999999999875     367899999987543 3334456889999999999999999999999999


Q ss_pred             EEEEEEeccCCCChHHHHHHcC----------------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCE
Q psy2648         119 TLYLVMEYASGGEVFDYLVLHG----------------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL  176 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~~----------------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNI  176 (708)
                      .+|+||||+++|+|.+++....                      .+++.++..++.||+.||.|||+++++||||||+||
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni  161 (288)
T cd05050          82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC  161 (288)
T ss_pred             ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence            9999999999999999997532                      367888999999999999999999999999999999


Q ss_pred             EEcCCCcEEEEeccCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHH
Q psy2648         177 LLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRE  252 (708)
Q Consensus       177 Lld~~~~iKL~DFGls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~  252 (708)
                      |++.++.+||+|||++........   ......++.|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..+
T Consensus       162 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~~~~~~p~~~~~~~~  240 (288)
T cd05050         162 LVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYT-TESDVWAYGVVLWEIFSYGMQPYYGMAHEE  240 (288)
T ss_pred             EecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999999875432211   1223456779999999887764 79999999999999997 999999988888


Q ss_pred             HHHHHHcCCC-CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHhhh
Q psy2648         253 LRERVLRGKY-RIPFYMSTDCENLLKKFLVLNPAKRASLEVSGEV  296 (708)
Q Consensus       253 l~~~i~~~~~-~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~~~  296 (708)
                      +...+..+.. ..|...+.++.+||.+||+.||.+|||++++.+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~  285 (288)
T cd05050         241 VIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRI  285 (288)
T ss_pred             HHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            8888877754 3466778999999999999999999999988753


No 250
>KOG0603|consensus
Probab=100.00  E-value=7.1e-41  Score=367.85  Aligned_cols=242  Identities=35%  Similarity=0.564  Sum_probs=215.1

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHh-CCCCCeeeEEEEEEeCCEEE
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKM-LDHPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~~~~~y  121 (708)
                      +....|++...+|.|+|+.|..|.+..+++..|||++.+...+      ..+|+.++.. -+||||+++++++.+..+.|
T Consensus       319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~  392 (612)
T KOG0603|consen  319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD------NQDEIPISLLVRDHPNIVKSHDVYEDGKEIY  392 (612)
T ss_pred             CcchhhccccccCCCCccceeeeeccccccchhheeccccccc------cccccchhhhhcCCCcceeecceecCCceee
Confidence            4567899999999999999999999999999999999876322      2356766544 47999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEE-cCCCcEEEEeccCccccCCCCC
Q psy2648         122 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL-DSEMNIKIADFGFSNEFTPGNK  200 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILl-d~~~~iKL~DFGls~~~~~~~~  200 (708)
                      +|||++.|+.|.+.+.....+. .++..|++||+.|+.|||++|||||||||+|||+ ++.++++|+|||.++.....  
T Consensus       393 ~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~--  469 (612)
T KOG0603|consen  393 LVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS--  469 (612)
T ss_pred             eeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence            9999999999999998776666 8889999999999999999999999999999999 69999999999999876544  


Q ss_pred             ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q psy2648         201 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLR-ELRERVLRGKYRIPFYMSTDCENLLKKF  279 (708)
Q Consensus       201 ~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~-~l~~~i~~~~~~~p~~~s~~~~~Li~~~  279 (708)
                      ..+-|-|..|.|||++....|+ +++|||||||+||+||+|+.||...... ++..+|..+++.  ..+|.+++|||++|
T Consensus       470 ~~tp~~t~~y~APEvl~~~~yt-~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s--~~vS~~AKdLl~~L  546 (612)
T KOG0603|consen  470 CDTPALTLQYVAPEVLAIQEYT-EACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS--ECVSDEAKDLLQQL  546 (612)
T ss_pred             hcccchhhcccChhhhccCCCC-cchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc--cccCHHHHHHHHHh
Confidence            4566788899999999988886 8999999999999999999999876555 888888877666  68999999999999


Q ss_pred             hhhCCCCCCCHHHHh---hh
Q psy2648         280 LVLNPAKRASLEVSG---EV  296 (708)
Q Consensus       280 L~~dP~~Rps~~~~~---~~  296 (708)
                      |+.||.+|++++++.   |+
T Consensus       547 L~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  547 LQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             ccCChhhCcChhhhccCcch
Confidence            999999999999987   76


No 251
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=100.00  E-value=1.1e-39  Score=346.55  Aligned_cols=249  Identities=31%  Similarity=0.527  Sum_probs=212.5

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ..+|++.+.||+|+||.||+|.+..+++.||||.+......  ..+.+.+|+.+++.++||||+++++++.....+|+||
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   95 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   95 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence            47899999999999999999999999999999999754432  3456789999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDT  203 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~  203 (708)
                      ||+++++|.+++.. ..+++.++..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++....... ....
T Consensus        96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~  174 (297)
T cd06656          96 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST  174 (297)
T ss_pred             cccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCc
Confidence            99999999998854 568999999999999999999999999999999999999999999999999987654332 2234


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-CC--CCCCCCCCHHHHHHHHHhh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR-GK--YRIPFYMSTDCENLLKKFL  280 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~-~~--~~~p~~~s~~~~~Li~~~L  280 (708)
                      ..+++.|+|||.+.+..+ +.++|||||||++|+|++|..||.+.+.......+.. +.  ...|...+..+.+||.+||
T Consensus       175 ~~~~~~y~aPE~~~~~~~-~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  253 (297)
T cd06656         175 MVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCL  253 (297)
T ss_pred             ccCCccccCHHHHcCCCC-CcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHc
Confidence            578999999999988776 4799999999999999999999987654332222222 21  1245567888999999999


Q ss_pred             hhCCCCCCCHHHHh---hhh
Q psy2648         281 VLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       281 ~~dP~~Rps~~~~~---~~~  297 (708)
                      ..||++||+++++.   |+.
T Consensus       254 ~~~p~~Rps~~~il~~~~~~  273 (297)
T cd06656         254 EMDVDRRGSAKELLQHPFLK  273 (297)
T ss_pred             cCChhhCcCHHHHhcCchhc
Confidence            99999999999887   654


No 252
>KOG0608|consensus
Probab=100.00  E-value=5.8e-41  Score=363.18  Aligned_cols=244  Identities=30%  Similarity=0.539  Sum_probs=210.3

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      ..-|..++.||-|+||+|.|++...|...||+|.+.|... .......+..|..||...+.+.||+||..|++++.+|+|
T Consensus       628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV  707 (1034)
T KOG0608|consen  628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV  707 (1034)
T ss_pred             ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence            3468899999999999999999999999999999987642 344556678899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC------
Q psy2648         124 MEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP------  197 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~------  197 (708)
                      |||++|||+..+|.+.+-|.|+.|++|+.+|.+|+++.|..|+|||||||+|||||.+|+|||+||||+.-|..      
T Consensus       708 MdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskY  787 (1034)
T KOG0608|consen  708 MDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY  787 (1034)
T ss_pred             EeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999864421      


Q ss_pred             ---CC----------------------------------CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc
Q psy2648         198 ---GN----------------------------------KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS  240 (708)
Q Consensus       198 ---~~----------------------------------~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt  240 (708)
                         +.                                  .....+||+.|+|||++....|. ..+||||.|||||||+.
T Consensus       788 Yq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~-q~cdwws~gvil~em~~  866 (1034)
T KOG0608|consen  788 YQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYT-QLCDWWSVGVILYEMLV  866 (1034)
T ss_pred             ccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCcc-ccchhhHhhHHHHHHhh
Confidence               00                                  01235699999999999988885 68999999999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHcCC--CCCC--CCCCHHHHHHHHHhhhhCCCCCCCH
Q psy2648         241 GSLPFDGSTLRELRERVLRGK--YRIP--FYMSTDCENLLKKFLVLNPAKRASL  290 (708)
Q Consensus       241 G~~Pf~~~~~~~l~~~i~~~~--~~~p--~~~s~~~~~Li~~~L~~dP~~Rps~  290 (708)
                      |+.||.+.+.-+...+|..-.  ..+|  ..+|+||.+||.++.+ +++.|..-
T Consensus       867 g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGk  919 (1034)
T KOG0608|consen  867 GQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGK  919 (1034)
T ss_pred             CCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhhhhcc
Confidence            999999877766655554432  2233  4689999999998765 78888753


No 253
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00  E-value=2.4e-39  Score=339.62  Aligned_cols=247  Identities=25%  Similarity=0.439  Sum_probs=213.9

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCc----EEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGK----EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~----~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  120 (708)
                      .++|++.+.||+|+||.||+|.++.+|+    .||+|.+.+... ......+.+|+.+|+.++||||+++++++.. ...
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~   83 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV   83 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence            3579999999999999999999887765    589998875532 4455678899999999999999999999987 789


Q ss_pred             EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         121 YLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      ++||||+++|+|.+++..+ ..+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++......
T Consensus        84 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~  163 (279)
T cd05057          84 QLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE  163 (279)
T ss_pred             EEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence            9999999999999999875 468999999999999999999999999999999999999999999999999997664332


Q ss_pred             Cc---cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHH
Q psy2648         200 KL---DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCEN  274 (708)
Q Consensus       200 ~~---~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~  274 (708)
                      ..   ....++..|+|||.+....++ .++|||||||++|+|++ |..||.+....++.+.+..+. ...|...+.++.+
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~-~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (279)
T cd05057         164 KEYHAEGGKVPIKWMALESILHRIYT-HKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYM  242 (279)
T ss_pred             cceecCCCcccccccCHHHhhcCCcC-chhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHH
Confidence            21   112235679999999877664 78999999999999998 999999999888888888764 3456677899999


Q ss_pred             HHHHhhhhCCCCCCCHHHHh
Q psy2648         275 LLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +|.+||..||.+||++.++.
T Consensus       243 ~~~~~l~~~p~~Rp~~~~l~  262 (279)
T cd05057         243 VLVKCWMIDAESRPTFKELI  262 (279)
T ss_pred             HHHHHcCCChhhCCCHHHHH
Confidence            99999999999999999876


No 254
>KOG0579|consensus
Probab=100.00  E-value=1e-41  Score=368.32  Aligned_cols=246  Identities=30%  Similarity=0.496  Sum_probs=221.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      +.|+|+..||.|+||+||+|..+.++-..|-|+|...  ..+.++.++-||+||...+||+||+|++.|..++.+||..|
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk--seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE  109 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK--SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE  109 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc--chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence            4689999999999999999999999999999999754  35677889999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC-CCCCccc
Q psy2648         126 YASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDT  203 (708)
Q Consensus       126 y~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-~~~~~~~  203 (708)
                      ||.||-....+..-+ .|.|.+++.+++|++.||.|||+++|||||||..|||+.-+|.|+|+|||.+.... .-..-.+
T Consensus       110 FC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDs  189 (1187)
T KOG0579|consen  110 FCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDS  189 (1187)
T ss_pred             ecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhcc
Confidence            999999988776654 59999999999999999999999999999999999999999999999999986442 2234578


Q ss_pred             cccCCccccccccc-----CCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCHHHHHH
Q psy2648         204 FCGSPPYAAPELFQ-----GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR---IPFYMSTDCENL  275 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~-----~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~---~p~~~s~~~~~L  275 (708)
                      +.|||.|||||+..     ..+|+ .++||||||++|.+|.-+.+|....++..++-+|.+..++   -|..++..+.|+
T Consensus       190 FIGTPYWMAPEVvmCET~KD~PYD-ykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~Df  268 (1187)
T KOG0579|consen  190 FIGTPYWMAPEVVMCETFKDQPYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDF  268 (1187)
T ss_pred             ccCCcccccchheeeccccCCCch-hhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHH
Confidence            99999999999874     45776 7999999999999999999999999998888888877654   478899999999


Q ss_pred             HHHhhhhCCCCCCCHHHHh
Q psy2648         276 LKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       276 i~~~L~~dP~~Rps~~~~~  294 (708)
                      |++||.+||..||+..++.
T Consensus       269 Lk~cL~Knp~~Rp~aaqll  287 (1187)
T KOG0579|consen  269 LKRCLVKNPRNRPPAAQLL  287 (1187)
T ss_pred             HHHHHhcCCccCCCHHHHh
Confidence            9999999999999998776


No 255
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00  E-value=2.5e-39  Score=335.99  Aligned_cols=246  Identities=28%  Similarity=0.451  Sum_probs=207.9

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      ..++|++.+.||+|+||.||+|.+..+ ..||+|++.....   ..+.+.+|+++++.++||||+++++++.. ...|+|
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v   78 (260)
T cd05069           4 PRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIV   78 (260)
T ss_pred             ChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEE
Confidence            346799999999999999999987655 4699998865432   23567889999999999999999998854 568999


Q ss_pred             EeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC-
Q psy2648         124 MEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-  200 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~-  200 (708)
                      |||+.+++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||+++++.+||+|||++........ 
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05069          79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence            99999999999997643  478899999999999999999999999999999999999999999999999976543221 


Q ss_pred             -ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHH
Q psy2648         201 -LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYMSTDCENLLK  277 (708)
Q Consensus       201 -~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~p~~~s~~~~~Li~  277 (708)
                       .....++..|+|||.+.+..++ .++|||||||++|+|++ |.+||.+.+..+....+..+ ....|...+..+.++|+
T Consensus       159 ~~~~~~~~~~y~~Pe~~~~~~~~-~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  237 (260)
T cd05069         159 ARQGAKFPIKWTAPEAALYGRFT-IKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMK  237 (260)
T ss_pred             ccCCCccchhhCCHHHhccCCcC-hHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHH
Confidence             1223456789999998877764 78999999999999999 99999998888877777665 23455667899999999


Q ss_pred             HhhhhCCCCCCCHHHHhh
Q psy2648         278 KFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       278 ~~L~~dP~~Rps~~~~~~  295 (708)
                      +||.+||.+||+++++..
T Consensus       238 ~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         238 LCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             HHccCCcccCcCHHHHHH
Confidence            999999999999998763


No 256
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00  E-value=1.8e-39  Score=342.86  Aligned_cols=248  Identities=30%  Similarity=0.457  Sum_probs=203.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCE-----
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEKT-----  119 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~-----  119 (708)
                      ++|++.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.+. ||||+++++++.....     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            4799999999999999999999999999999998765433333456788999999995 6999999999887665     


Q ss_pred             EEEEEeccCCCChHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcC-CCcEEEEeccCcc
Q psy2648         120 LYLVMEYASGGEVFDYLVLH-----GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS-EMNIKIADFGFSN  193 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~-----~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~-~~~iKL~DFGls~  193 (708)
                      +|+||||+++ +|.+++...     ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++.
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~  159 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR  159 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence            8999999986 899888653     34799999999999999999999999999999999999998 8899999999987


Q ss_pred             ccCCC-CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--C--------
Q psy2648         194 EFTPG-NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK--Y--------  262 (708)
Q Consensus       194 ~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~--~--------  262 (708)
                      .+... .......+++.|+|||++.+....+.++|||||||++|+|++|..||.+.+..+...++....  .        
T Consensus       160 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (295)
T cd07837         160 AFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV  239 (295)
T ss_pred             ecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence            65322 222334678899999998764433579999999999999999999998876554433332210  0        


Q ss_pred             -------CCC-----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         263 -------RIP-----------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       263 -------~~p-----------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                             ..|           ...++++.+||.+||..||.+||++++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil  289 (295)
T cd07837         240 SKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAAL  289 (295)
T ss_pred             hhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHh
Confidence                   001           23678899999999999999999999887


No 257
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00  E-value=1.7e-39  Score=345.97  Aligned_cols=250  Identities=26%  Similarity=0.402  Sum_probs=209.0

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEE-----cCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEe
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKH-----VPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIET  116 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~-----~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~  116 (708)
                      ...++|.+.+.||+|+||.||+|.+     ..++..||||++++.. .....+.+.+|+++++++ +||||+++++++..
T Consensus        32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  110 (302)
T cd05055          32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTI  110 (302)
T ss_pred             ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence            3345799999999999999999975     3456689999987543 233456788999999999 79999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccc
Q psy2648         117 EKTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE  194 (708)
Q Consensus       117 ~~~~ylVmEy~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~  194 (708)
                      .+.+|+||||+.+|+|.+++....  .+++.++..++.||+.||+|||+++|+|+||||+|||++.++.+||+|||+++.
T Consensus       111 ~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~  190 (302)
T cd05055         111 GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARD  190 (302)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence            999999999999999999997643  389999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC--CCCCCC
Q psy2648         195 FTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKY--RIPFYM  268 (708)
Q Consensus       195 ~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~--~~p~~~  268 (708)
                      ......   .....+++.|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..+...+.....+  ..|...
T Consensus       191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (302)
T cd05055         191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYT-FESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHA  269 (302)
T ss_pred             ccCCCceeecCCCCcccccCCHhhhccCCCC-cHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCC
Confidence            543221   1223457789999999887764 78999999999999998 9999988765544433333222  345567


Q ss_pred             CHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         269 STDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       269 s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ++++.+||.+||..||++||+++++.
T Consensus       270 ~~~~~~li~~cl~~~p~~Rpt~~ell  295 (302)
T cd05055         270 PAEIYDIMKTCWDADPLKRPTFKQIV  295 (302)
T ss_pred             CHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            89999999999999999999999876


No 258
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00  E-value=2e-39  Score=336.34  Aligned_cols=244  Identities=27%  Similarity=0.465  Sum_probs=209.1

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      -++|++.+.||+|+||.||+|... +++.||+|.+......   ...+.+|+.+|+.++||||+++++++. .+.+|+||
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~   79 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT   79 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence            357999999999999999999854 6788999999765443   346789999999999999999999874 45789999


Q ss_pred             eccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC--
Q psy2648         125 EYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--  200 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~--  200 (708)
                      ||+.+++|.+++...  ..+++.++..++.||+.||+|||++|++||||||+||++++++.++|+|||++........  
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~  159 (260)
T cd05067          80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA  159 (260)
T ss_pred             EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCccc
Confidence            999999999998764  3588999999999999999999999999999999999999999999999999876542221  


Q ss_pred             ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHH
Q psy2648         201 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLLKK  278 (708)
Q Consensus       201 ~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~~  278 (708)
                      .....++..|+|||++.+..+ +.++|||||||++|+|++ |.+||.+.+..++...+..+. ...|...+.++.++|.+
T Consensus       160 ~~~~~~~~~y~~pe~~~~~~~-~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  238 (260)
T cd05067         160 REGAKFPIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMRL  238 (260)
T ss_pred             ccCCcccccccCHHHhccCCc-CcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence            123345678999999987766 478999999999999999 999999988888877776552 34566778899999999


Q ss_pred             hhhhCCCCCCCHHHHh
Q psy2648         279 FLVLNPAKRASLEVSG  294 (708)
Q Consensus       279 ~L~~dP~~Rps~~~~~  294 (708)
                      ||..||++||+++++.
T Consensus       239 ~l~~~p~~Rp~~~~l~  254 (260)
T cd05067         239 CWKEKPEERPTFEYLR  254 (260)
T ss_pred             HccCChhhCCCHHHHH
Confidence            9999999999999876


No 259
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00  E-value=4.5e-40  Score=341.31  Aligned_cols=249  Identities=30%  Similarity=0.507  Sum_probs=214.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++..... ....+.+.+|+++++.++||||+++++++..+..+|+|||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME   79 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence            468889999999999999999999999999999976543 3445678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccc
Q psy2648         126 YASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT  203 (708)
Q Consensus       126 y~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~-~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~  203 (708)
                      |+++++|.+++... ..+++..+..++.||+.||+|||+ .+++||||||+||++++++.+||+|||++....... ...
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~-~~~  158 (265)
T cd06605          80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL-AKT  158 (265)
T ss_pred             ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH-hhc
Confidence            99999999999876 789999999999999999999999 999999999999999999999999999986553222 123


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHHcCC-CCCCCC-CCHHHHHHH
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS-----TLRELRERVLRGK-YRIPFY-MSTDCENLL  276 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~-----~~~~l~~~i~~~~-~~~p~~-~s~~~~~Li  276 (708)
                      ..++..|+|||.+.+..++ .++|||||||++|+|++|..||...     ...+..+.+.... ...|.. .+.++.++|
T Consensus       159 ~~~~~~y~~PE~~~~~~~~-~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  237 (265)
T cd06605         159 FVGTSSYMAPERIQGNDYS-VKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFV  237 (265)
T ss_pred             ccCChhccCHHHHcCCCCC-chhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHH
Confidence            7789999999999888764 7899999999999999999999764     3344445554443 234444 788999999


Q ss_pred             HHhhhhCCCCCCCHHHHh---hhh
Q psy2648         277 KKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       277 ~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                      .+||..||.+||++++++   |++
T Consensus       238 ~~~l~~~p~~Rpt~~~ll~~~~~~  261 (265)
T cd06605         238 NLCLIKDPRERPSYKELLEHPFIK  261 (265)
T ss_pred             HHHcCCCchhCcCHHHHhhCchhh
Confidence            999999999999999987   664


No 260
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00  E-value=1.3e-39  Score=336.05  Aligned_cols=247  Identities=31%  Similarity=0.576  Sum_probs=214.6

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|.+.+.||+|+||.||+|.+..+|..||+|.+..........+.+.+|+++++.++||||+++++.++....+|+|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            58999999999999999999999999999999977654444556778999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCc-EEEEeccCccccCCCC-Ccc
Q psy2648         127 ASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGN-KLD  202 (708)
Q Consensus       127 ~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~-iKL~DFGls~~~~~~~-~~~  202 (708)
                      +++++|.+++....  .+++..+..++.||+.||.|||+++|+|+||||+||++++++. +||+|||++....... ...
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~  160 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY  160 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence            99999999987654  4789999999999999999999999999999999999998864 6999999987654332 223


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHhhh
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR-IPFYMSTDCENLLKKFLV  281 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~-~p~~~s~~~~~Li~~~L~  281 (708)
                      ...|++.|+|||++.+..++ .++|+|||||++|+|++|..||...+..+....+..+... .+...+.++.++|.+||.
T Consensus       161 ~~~~~~~~~ape~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  239 (257)
T cd08225         161 TCVGTPYYLSPEICQNRPYN-NKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFK  239 (257)
T ss_pred             ccCCCccccCHHHHcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhc
Confidence            35689999999999877664 7899999999999999999999988777766666655432 444578899999999999


Q ss_pred             hCCCCCCCHHHHh
Q psy2648         282 LNPAKRASLEVSG  294 (708)
Q Consensus       282 ~dP~~Rps~~~~~  294 (708)
                      .||++|||++++.
T Consensus       240 ~~p~~Rpt~~~ll  252 (257)
T cd08225         240 VSPRDRPSITSIL  252 (257)
T ss_pred             cChhhCcCHHHHh
Confidence            9999999999876


No 261
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00  E-value=1.2e-39  Score=342.16  Aligned_cols=248  Identities=28%  Similarity=0.458  Sum_probs=205.7

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEe-----
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIET-----  116 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~-----  116 (708)
                      ...+.|++.+.||+|+||.||+|++..+++.||+|++....   .....+..|+.+++.+ +||||+++++++..     
T Consensus        13 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~   89 (282)
T cd06636          13 DPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG   89 (282)
T ss_pred             ChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence            34579999999999999999999999999999999986542   2345677899999988 79999999999843     


Q ss_pred             -CCEEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcc
Q psy2648         117 -EKTLYLVMEYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN  193 (708)
Q Consensus       117 -~~~~ylVmEy~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~  193 (708)
                       ...+|+||||+++|+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus        90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~  169 (282)
T cd06636          90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  169 (282)
T ss_pred             CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence             46789999999999999998764  358899999999999999999999999999999999999999999999999987


Q ss_pred             ccCC-CCCccccccCCcccccccccC-----CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-C-CC
Q psy2648         194 EFTP-GNKLDTFCGSPPYAAPELFQG-----KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-R-IP  265 (708)
Q Consensus       194 ~~~~-~~~~~~~~Gt~~Y~APE~l~~-----~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~-~-~p  265 (708)
                      .... ........|++.|+|||++..     ..++ .++|||||||++|+|++|..||......+....+..... . .+
T Consensus       170 ~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~-~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  248 (282)
T cd06636         170 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYD-YRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKS  248 (282)
T ss_pred             hhhccccCCCcccccccccCHhhcCcccCcCcCCC-cccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcc
Confidence            5432 122345679999999999863     3343 689999999999999999999987665444333333321 1 12


Q ss_pred             CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         266 FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       266 ~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ...+.++.+||.+||..||.+||++++++
T Consensus       249 ~~~~~~~~~li~~cl~~~p~~Rp~~~ell  277 (282)
T cd06636         249 KKWSKKFIDFIEGCLVKNYLSRPSTEQLL  277 (282)
T ss_pred             cccCHHHHHHHHHHhCCChhhCcCHHHHh
Confidence            34688999999999999999999999876


No 262
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00  E-value=3e-39  Score=332.59  Aligned_cols=240  Identities=30%  Similarity=0.468  Sum_probs=205.2

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGE  131 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg~  131 (708)
                      +.||+|+||.||+|.+. ++..||+|++.... .......+.+|+++++.++||||+++++++......|+||||+++++
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   78 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD   78 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence            36899999999999864 68899999987543 33344568899999999999999999999999999999999999999


Q ss_pred             hHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC--ccccccCC
Q psy2648         132 VFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--LDTFCGSP  208 (708)
Q Consensus       132 L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~--~~~~~Gt~  208 (708)
                      |.+++... ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++.....+..  .....+++
T Consensus        79 L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~  158 (250)
T cd05085          79 FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPI  158 (250)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcc
Confidence            99998754 4678999999999999999999999999999999999999999999999999875432211  11224456


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHhhhhCCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLLKKFLVLNPAK  286 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~~~L~~dP~~  286 (708)
                      .|+|||++.+..++ .++|||||||++|+|++ |..||.+.+.......+..+. ...|...+.++.+++.+||..||++
T Consensus       159 ~y~aPE~~~~~~~~-~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  237 (250)
T cd05085         159 KWTAPEALNYGRYS-SESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPEN  237 (250)
T ss_pred             cccCHHHhccCCCC-chhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCccc
Confidence            79999999877664 78999999999999998 999999888888777776653 3456678899999999999999999


Q ss_pred             CCCHHHHh
Q psy2648         287 RASLEVSG  294 (708)
Q Consensus       287 Rps~~~~~  294 (708)
                      ||+++++.
T Consensus       238 Rp~~~~l~  245 (250)
T cd05085         238 RPKFSELQ  245 (250)
T ss_pred             CCCHHHHH
Confidence            99999875


No 263
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=100.00  E-value=3.3e-39  Score=331.66  Aligned_cols=247  Identities=37%  Similarity=0.648  Sum_probs=221.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++.+.||+|+||.||++.+..+++.||+|++..........+.+.+|+++++.++|||++++++.+.....+++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            58999999999999999999999999999999987665556667788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cc
Q psy2648         127 ASGGEVFDYLVLH----GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KL  201 (708)
Q Consensus       127 ~~gg~L~~~i~~~----~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~  201 (708)
                      +++++|.+++...    ..+++.++..++.||+.||.|||++|++|+||+|+||+++.+++++|+|||++....... ..
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~  160 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA  160 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence            9999999999764    679999999999999999999999999999999999999999999999999987654432 33


Q ss_pred             cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHhh
Q psy2648         202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCENLLKKFL  280 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~-~~p~~~s~~~~~Li~~~L  280 (708)
                      ...+|++.|+|||.+.+..++ .++|+||||+++|+|++|..||...+..++...+..... .+|...+.++.++|.+||
T Consensus       161 ~~~~~~~~y~~pe~~~~~~~~-~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  239 (258)
T cd08215         161 KTVVGTPYYLSPELCQNKPYN-YKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLL  239 (258)
T ss_pred             cceeeeecccChhHhccCCCC-ccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence            456789999999998887764 789999999999999999999998888888777766643 456678899999999999


Q ss_pred             hhCCCCCCCHHHHh
Q psy2648         281 VLNPAKRASLEVSG  294 (708)
Q Consensus       281 ~~dP~~Rps~~~~~  294 (708)
                      ..||++||++++++
T Consensus       240 ~~~p~~Rp~~~~ll  253 (258)
T cd08215         240 QKDPEERPSIAQIL  253 (258)
T ss_pred             CCChhhCcCHHHHh
Confidence            99999999999876


No 264
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00  E-value=4e-39  Score=333.38  Aligned_cols=246  Identities=32%  Similarity=0.518  Sum_probs=216.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++.+.||+|+||.||+|.+..+++.||||++...... ...+.+.+|+.+++.++||||+++++++.....+|+||||
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            689999999999999999999999999999998765432 4456788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc-ccc
Q psy2648         127 ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-DTF  204 (708)
Q Consensus       127 ~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~-~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~-~~~  204 (708)
                      +++++|.+++.....+++..+..++.||+.||+|||+ ++++||||+|+||+++.++.++|+|||++......... ...
T Consensus        81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~  160 (264)
T cd06623          81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTF  160 (264)
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccce
Confidence            9999999999888889999999999999999999999 99999999999999999999999999998766433322 256


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHHHcCC-CCCCCC-CCHHHHHHHHHh
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS---TLRELRERVLRGK-YRIPFY-MSTDCENLLKKF  279 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~---~~~~l~~~i~~~~-~~~p~~-~s~~~~~Li~~~  279 (708)
                      .++..|+|||.+.+..+ +.++|+||||+++|+|++|..||...   ...++...+.... ...+.. .+..+.++|++|
T Consensus       161 ~~~~~y~~pE~~~~~~~-~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  239 (264)
T cd06623         161 VGTVTYMSPERIQGESY-SYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISAC  239 (264)
T ss_pred             eecccccCHhhhCCCCC-CchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHH
Confidence            78899999999987765 47899999999999999999999876   5566666666443 334555 788999999999


Q ss_pred             hhhCCCCCCCHHHHh
Q psy2648         280 LVLNPAKRASLEVSG  294 (708)
Q Consensus       280 L~~dP~~Rps~~~~~  294 (708)
                      |..+|++||+++++.
T Consensus       240 l~~~p~~R~~~~~ll  254 (264)
T cd06623         240 LQKDPKKRPSAAELL  254 (264)
T ss_pred             ccCChhhCCCHHHHH
Confidence            999999999999987


No 265
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=100.00  E-value=1.4e-39  Score=344.71  Aligned_cols=248  Identities=23%  Similarity=0.368  Sum_probs=205.8

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCC--------------cEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTG--------------KEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL  110 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg--------------~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l  110 (708)
                      ..+|++.+.||+|+||.||+|++..++              ..||||++.... .......+.+|+++|+.++||||+++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~   82 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNIIRL   82 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence            358999999999999999999876432              359999987542 34445678899999999999999999


Q ss_pred             EEEEEeCCEEEEEEeccCCCChHHHHHHcC------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEE
Q psy2648         111 FQVIETEKTLYLVMEYASGGEVFDYLVLHG------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL  178 (708)
Q Consensus       111 ~~~~~~~~~~ylVmEy~~gg~L~~~i~~~~------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILl  178 (708)
                      ++++......|+||||+.+++|.+++....            .+++..+..++.||+.||+|||++|++||||||+|||+
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill  162 (295)
T cd05097          83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV  162 (295)
T ss_pred             EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence            999999999999999999999999986542            36788899999999999999999999999999999999


Q ss_pred             cCCCcEEEEeccCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc--CCCCCCCCCHHHH
Q psy2648         179 DSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS--GSLPFDGSTLREL  253 (708)
Q Consensus       179 d~~~~iKL~DFGls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt--G~~Pf~~~~~~~l  253 (708)
                      +.++.+||+|||++........   .....+++.|+|||++.+..+ +.++|||||||++|+|++  |..||...+..++
T Consensus       163 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~  241 (295)
T cd05097         163 GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKF-TTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQV  241 (295)
T ss_pred             cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCc-CchhhHHHHHHHHHHHHHcCCCCCCcccChHHH
Confidence            9999999999999876533221   122345678999999987776 489999999999999988  7889988776666


Q ss_pred             HHHHHc-----CC---CCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         254 RERVLR-----GK---YRIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       254 ~~~i~~-----~~---~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ...+..     +.   ...+...++++.+||.+||..||++||+++++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~  290 (295)
T cd05097         242 IENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIH  290 (295)
T ss_pred             HHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            554422     11   123455788999999999999999999999876


No 266
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=100.00  E-value=2.3e-39  Score=339.81  Aligned_cols=246  Identities=30%  Similarity=0.524  Sum_probs=206.7

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++.+.||+|+||.||+|++..+|+.||||++..... ......+.+|+.++++++||||+++++++.+.+.+||||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   79 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY   79 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence            59999999999999999999999999999999976532 22345677899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Ccc
Q psy2648         127 ASGGEVFDYLVLHG---RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLD  202 (708)
Q Consensus       127 ~~gg~L~~~i~~~~---~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~  202 (708)
                      +++ +|.+++...+   .+++.++..++.||+.||.|||++||+||||||+||++++++.+||+|||++....... ...
T Consensus        80 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~  158 (284)
T cd07836          80 MDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFS  158 (284)
T ss_pred             CCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccc
Confidence            985 8998887653   58999999999999999999999999999999999999999999999999987553321 223


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC------------------CCC
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK------------------YRI  264 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~------------------~~~  264 (708)
                      ...+++.|++||++.+....+.++|||||||++|+|++|..||.+.+..+....+....                  ..+
T Consensus       159 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07836         159 NEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTF  238 (284)
T ss_pred             cccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccc
Confidence            45678899999998775444578999999999999999999999877665554443210                  001


Q ss_pred             C-----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         265 P-----------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       265 p-----------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      |           ...++++.++|.+||+.||.+||+++++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l  279 (284)
T cd07836         239 PRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDAL  279 (284)
T ss_pred             cCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHh
Confidence            1           23577899999999999999999999876


No 267
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00  E-value=4.9e-39  Score=339.35  Aligned_cols=248  Identities=27%  Similarity=0.419  Sum_probs=207.3

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeC-----
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIETE-----  117 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~-----  117 (708)
                      ..++|.+.+.||+|+||.||+|.+..+++.||+|++.....   ....+.+|+.+++.+ +||||+++++++...     
T Consensus        20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~   96 (291)
T cd06639          20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD---VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG   96 (291)
T ss_pred             CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc---HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence            36789999999999999999999999999999999865422   234567899999998 899999999998754     


Q ss_pred             CEEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcc
Q psy2648         118 KTLYLVMEYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN  193 (708)
Q Consensus       118 ~~~ylVmEy~~gg~L~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~  193 (708)
                      ..+|+||||+++++|.+++..    ...+++..++.++.||+.||+|||+++|+||||||+||+++.++.+||+|||++.
T Consensus        97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~  176 (291)
T cd06639          97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA  176 (291)
T ss_pred             CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence            368999999999999998753    3568999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCC-CccccccCCcccccccccCCcc----CCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC---CCC
Q psy2648         194 EFTPGN-KLDTFCGSPPYAAPELFQGKKY----DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---RIP  265 (708)
Q Consensus       194 ~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~----~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~---~~p  265 (708)
                      ...... .....+|++.|+|||++.....    .+.++|||||||++|+|++|+.||...+..+....+.++..   ..|
T Consensus       177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  256 (291)
T cd06639         177 QLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHP  256 (291)
T ss_pred             hcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcc
Confidence            654322 2234578999999999864321    24789999999999999999999988776555555554422   234


Q ss_pred             CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         266 FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       266 ~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ...+.++.+||.+||..||++||+++++.
T Consensus       257 ~~~~~~l~~li~~~l~~~p~~Rps~~~il  285 (291)
T cd06639         257 EKWCRSFNHFISQCLIKDFEARPSVTHLL  285 (291)
T ss_pred             cccCHHHHHHHHHHhhcChhhCcCHHHHh
Confidence            45678899999999999999999999876


No 268
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00  E-value=2.7e-39  Score=337.37  Aligned_cols=248  Identities=30%  Similarity=0.441  Sum_probs=207.7

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC--------hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN--------PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK  118 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~--------~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~  118 (708)
                      +|.+.+.||+|+||.||+|.+..+++.||||.+......        ....+.+.+|+.+++.++||||++++++++...
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            689999999999999999999999999999988643211        112345778999999999999999999999999


Q ss_pred             EEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC
Q psy2648         119 TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG  198 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~  198 (708)
                      .+++||||+.+++|.+++...+.+++..++.++.||+.||.|||+++++||||||+||+++.++.+||+|||++......
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  161 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI  161 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence            99999999999999999988889999999999999999999999999999999999999999999999999998754321


Q ss_pred             ---CCccccccCCcccccccccCCc-cCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC--CCCCCC----CC
Q psy2648         199 ---NKLDTFCGSPPYAAPELFQGKK-YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG--KYRIPF----YM  268 (708)
Q Consensus       199 ---~~~~~~~Gt~~Y~APE~l~~~~-~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~--~~~~p~----~~  268 (708)
                         .......|+..|+|||++.... ..+.++|+|||||++|+|++|..||......+....+...  ...+|.    .+
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (272)
T cd06629         162 YDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNL  241 (272)
T ss_pred             ccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccC
Confidence               1123457889999999987654 1247899999999999999999999766554433333222  122232    35


Q ss_pred             CHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         269 STDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       269 s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +.++.++|.+||..||++||++++++
T Consensus       242 ~~~~~~li~~~l~~~p~~Rps~~~il  267 (272)
T cd06629         242 SPVALDFLNACFTINPDNRPTARELL  267 (272)
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHh
Confidence            78999999999999999999999876


No 269
>KOG1026|consensus
Probab=100.00  E-value=1.6e-40  Score=375.45  Aligned_cols=247  Identities=27%  Similarity=0.457  Sum_probs=217.2

Q ss_pred             CCeEEEeEEcccCceEEEEEEEc-----CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHV-----PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~-----~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  120 (708)
                      .+-+..+.||+|.||+||+|+-.     .....||||.++... +....+.|.||+++|..|+|||||+|++++..++.+
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~  564 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL  564 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence            45677899999999999999854     334679999997553 334567899999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEE
Q psy2648         121 YLVMEYASGGEVFDYLVLHG--------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKI  186 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~--------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL  186 (708)
                      |+|+||+..|||.+||+.++              .++..+...++.||+.||+||-++.+|||||...|+|+.++..|||
T Consensus       565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKI  644 (774)
T KOG1026|consen  565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKI  644 (774)
T ss_pred             EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEe
Confidence            99999999999999998643              2678899999999999999999999999999999999999999999


Q ss_pred             EeccCccccCCCCCccc---cccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC
Q psy2648         187 ADFGFSNEFTPGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKY  262 (708)
Q Consensus       187 ~DFGls~~~~~~~~~~~---~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~  262 (708)
                      +||||++..-..+..+.   ..=-..|||||.|...+|+ .++||||+||+|||+++ |..||.+.+.+|+++.|..|+.
T Consensus       645 sDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFT-teSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l  723 (774)
T KOG1026|consen  645 SDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFT-TESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL  723 (774)
T ss_pred             cccccchhhhhhhhhcccCCceeeeecCCHHHhhcCccc-chhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc
Confidence            99999986543322211   1223579999999999996 79999999999999998 9999999999999999999975


Q ss_pred             -CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         263 -RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       263 -~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                       ..|..++.++.+||..||+.+|.+||++.+|.
T Consensus       724 L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  724 LSCPENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence             56889999999999999999999999999987


No 270
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00  E-value=1.9e-39  Score=346.51  Aligned_cols=239  Identities=28%  Similarity=0.480  Sum_probs=187.7

Q ss_pred             EeEEcccCceEEEEEEEcC--CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEe--CCEEEEEEec
Q psy2648          51 LKTIGKGNFAKVKLAKHVP--TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIET--EKTLYLVMEY  126 (708)
Q Consensus        51 ~~~LG~G~fg~V~la~~~~--tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~ylVmEy  126 (708)
                      ...||+|+||.||+|++..  +++.||+|.+.....    ...+.+|+++|+.++||||+++++++..  +..+|+||||
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY   81 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence            4689999999999999764  668999999875432    2356789999999999999999999853  5678999999


Q ss_pred             cCCCChHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEE----cCCCcEEEEeccCcc
Q psy2648         127 ASGGEVFDYLVLH---------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL----DSEMNIKIADFGFSN  193 (708)
Q Consensus       127 ~~gg~L~~~i~~~---------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILl----d~~~~iKL~DFGls~  193 (708)
                      +.+ +|.+++...         ..+++..++.++.||+.||.|||+++|+||||||+|||+    +.++.+||+|||+++
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07867          82 AEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             eCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence            875 788877532         247899999999999999999999999999999999999    566789999999997


Q ss_pred             ccCCC----CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHH----------HHHHHH--
Q psy2648         194 EFTPG----NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLR----------ELRERV--  257 (708)
Q Consensus       194 ~~~~~----~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~----------~l~~~i--  257 (708)
                      .....    .......||+.|+|||++.+....+.++|||||||++|+|++|..||......          .+...+  
T Consensus       161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~  240 (317)
T cd07867         161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSV  240 (317)
T ss_pred             ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHh
Confidence            65432    12345678999999999987554468999999999999999999999753211          110000  


Q ss_pred             -------------------------HcCCCC----------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         258 -------------------------LRGKYR----------IPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       258 -------------------------~~~~~~----------~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                               ....+.          .....+..+.+||.+||+.||.+|||+++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l  312 (317)
T cd07867         241 MGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQAL  312 (317)
T ss_pred             cCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHh
Confidence                                     000000          0112345688999999999999999999876


No 271
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=100.00  E-value=6.9e-39  Score=329.30  Aligned_cols=247  Identities=29%  Similarity=0.491  Sum_probs=218.4

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|++.+.||+|+||.||++.+..+++.||||.+..........+.+.+|+++++.++||||+++++++.+...+|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            58999999999999999999999999999999987765555667889999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC-ccccc
Q psy2648         127 ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFC  205 (708)
Q Consensus       127 ~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~-~~~~~  205 (708)
                      +++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++........ .....
T Consensus        81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~  160 (254)
T cd06627          81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVV  160 (254)
T ss_pred             CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccc
Confidence            99999999998888999999999999999999999999999999999999999999999999999876644322 23467


Q ss_pred             cCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHhhhhCC
Q psy2648         206 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVL-RGKYRIPFYMSTDCENLLKKFLVLNP  284 (708)
Q Consensus       206 Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~-~~~~~~p~~~s~~~~~Li~~~L~~dP  284 (708)
                      ++..|+|||.+.+..+ +.++||||||+++|+|++|..||...+.......+. .....+|...+.++.++|.+||..||
T Consensus       161 ~~~~y~~pe~~~~~~~-~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  239 (254)
T cd06627         161 GTPYWMAPEVIEMSGA-STASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDP  239 (254)
T ss_pred             cchhhcCHhhhcCCCC-CcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCCh
Confidence            8999999999887765 478999999999999999999998766554444443 33445677788999999999999999


Q ss_pred             CCCCCHHHHh
Q psy2648         285 AKRASLEVSG  294 (708)
Q Consensus       285 ~~Rps~~~~~  294 (708)
                      ++||+++++.
T Consensus       240 ~~R~~~~~~l  249 (254)
T cd06627         240 NLRPTAKQLL  249 (254)
T ss_pred             hhCcCHHHHh
Confidence            9999998865


No 272
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00  E-value=6.2e-39  Score=333.76  Aligned_cols=246  Identities=29%  Similarity=0.510  Sum_probs=211.2

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCC---CChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--CEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQ---LNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE--KTLY  121 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~---~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~y  121 (708)
                      +|++.+.||+|+||.||+|.+..+++.||+|++....   ........+.+|++++++++||||+++++.+.+.  ..++
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (264)
T cd06653           3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS   82 (264)
T ss_pred             ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence            6999999999999999999999999999999986432   1234456788999999999999999999998764  5689


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC----
Q psy2648         122 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP----  197 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~----  197 (708)
                      +||||+++++|.+++...+.+++..++.++.||+.||.|||+++|+||||||+||+++.++.++|+|||+++....    
T Consensus        83 ~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~  162 (264)
T cd06653          83 IFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMS  162 (264)
T ss_pred             EEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccccccc
Confidence            9999999999999998888899999999999999999999999999999999999999999999999999876532    


Q ss_pred             CCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHH
Q psy2648         198 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK--YRIPFYMSTDCENL  275 (708)
Q Consensus       198 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~--~~~p~~~s~~~~~L  275 (708)
                      ........|+..|+|||++.+..++ .++|||||||++|+|++|+.||.+....+...++....  ..+|..+++++.++
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  241 (264)
T cd06653         163 GTGIKSVTGTPYWMSPEVISGEGYG-RKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDF  241 (264)
T ss_pred             CccccccCCcccccCHhhhcCCCCC-ccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHH
Confidence            1122346789999999999887664 78999999999999999999998876555444544332  34677889999999


Q ss_pred             HHHhhhhCCCCCCCHHHHh
Q psy2648         276 LKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       276 i~~~L~~dP~~Rps~~~~~  294 (708)
                      |.+||. +|.+||+.+++.
T Consensus       242 i~~~l~-~~~~r~~~~~~~  259 (264)
T cd06653         242 LKQIFV-EEKRRPTAEFLL  259 (264)
T ss_pred             HHHHhc-CcccCccHHHHh
Confidence            999999 679999998765


No 273
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00  E-value=4.1e-39  Score=339.92  Aligned_cols=248  Identities=28%  Similarity=0.479  Sum_probs=200.4

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      .++|++.+.||+|+||.||+|.+..+++.||||++...... .....+.+|+++++.++||||+++++++..+...|+||
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            35799999999999999999999999999999999754322 22335678999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC-CCCcc
Q psy2648         125 EYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLD  202 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~-~~~~~  202 (708)
                      ||+. ++|.+++... +.+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.... .....
T Consensus        83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  161 (291)
T cd07870          83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYS  161 (291)
T ss_pred             eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCC
Confidence            9996 6888777654 5688999999999999999999999999999999999999999999999999875422 22234


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHc--C--------------CC---
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLR-ELRERVLR--G--------------KY---  262 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~-~l~~~i~~--~--------------~~---  262 (708)
                      ...+++.|+|||++.+......++|||||||++|+|++|..||.+.+.. +....+..  +              .+   
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (291)
T cd07870         162 SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPE  241 (291)
T ss_pred             CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccch
Confidence            4567899999999876543347899999999999999999999865431 22222110  0              00   


Q ss_pred             CC----C---------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         263 RI----P---------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       263 ~~----p---------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ..    +         ...++++.++|.+||+.||.+|||+++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l  286 (291)
T cd07870         242 WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDAL  286 (291)
T ss_pred             hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHh
Confidence            00    0         01256889999999999999999999876


No 274
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=100.00  E-value=5.7e-40  Score=340.64  Aligned_cols=237  Identities=23%  Similarity=0.368  Sum_probs=198.9

Q ss_pred             eEEcccCceEEEEEEEcCCCc-------EEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGK-------EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~-------~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      +.||+|+||.||+|.+..++.       .||+|++....  ....+.+..|+.+|+.++|||||++++++......++||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   78 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ   78 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence            368999999999999876554       48888876432  234457888999999999999999999999989999999


Q ss_pred             eccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCc--------EEEEeccCcccc
Q psy2648         125 EYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN--------IKIADFGFSNEF  195 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~--------iKL~DFGls~~~  195 (708)
                      ||+++|+|.+++..++ .+++..+..++.||+.||+|||++||+||||||+|||++.++.        +|++|||++...
T Consensus        79 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~  158 (258)
T cd05078          79 EYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV  158 (258)
T ss_pred             ecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence            9999999999997654 5899999999999999999999999999999999999987764        699999998655


Q ss_pred             CCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHH
Q psy2648         196 TPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-SLPFDGSTLRELRERVLRGKYRIPFYMSTDCEN  274 (708)
Q Consensus       196 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG-~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~  274 (708)
                      ..   .....+++.|+|||++.+....+.++|||||||++|+|++| ..||...+...... +......+|...+.++.+
T Consensus       159 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  234 (258)
T cd05078         159 LP---KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYEDRHQLPAPKWTELAN  234 (258)
T ss_pred             CC---chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHHccccCCCCCcHHHHH
Confidence            33   23457889999999998744335789999999999999998 57777666554433 344456677777899999


Q ss_pred             HHHHhhhhCCCCCCCHHHHh
Q psy2648         275 LLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ||.+||+.||++|||++++.
T Consensus       235 li~~~l~~~p~~Rps~~~il  254 (258)
T cd05078         235 LINQCMDYEPDFRPSFRAII  254 (258)
T ss_pred             HHHHHhccChhhCCCHHHHH
Confidence            99999999999999999875


No 275
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00  E-value=3.7e-39  Score=332.08  Aligned_cols=245  Identities=31%  Similarity=0.496  Sum_probs=212.5

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCC----cEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTG----KEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg----~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      +++.+.||.|+||.||+|++..++    ..||+|++..... ....+.+..|+++++.++||||+++++++.+.+.+|+|
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i   79 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD-EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV   79 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC-hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence            357889999999999999998776    8999999965432 22556788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc
Q psy2648         124 MEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL  201 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~~--l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~  201 (708)
                      |||+++++|.+++.....  +++.++..++.||+.||.|||+++++||||||+||+++.++.+||+|||++.........
T Consensus        80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~  159 (258)
T smart00219       80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY  159 (258)
T ss_pred             EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence            999999999999976554  999999999999999999999999999999999999999999999999998765433211


Q ss_pred             c--ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHH
Q psy2648         202 D--TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCENLLK  277 (708)
Q Consensus       202 ~--~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~-~~p~~~s~~~~~Li~  277 (708)
                      .  ...+++.|+|||.+.+..+ +.++|||||||++|+|++ |..||...+..++.+.+..+.. ..|...+.++.+++.
T Consensus       160 ~~~~~~~~~~y~~Pe~~~~~~~-~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  238 (258)
T smart00219      160 KKKGGKLPIRWMAPESLKDGKF-TSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLML  238 (258)
T ss_pred             ccccCCCcccccChHHhccCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHH
Confidence            1  1236788999999976665 489999999999999998 8999999888888888877644 345668899999999


Q ss_pred             HhhhhCCCCCCCHHHHh
Q psy2648         278 KFLVLNPAKRASLEVSG  294 (708)
Q Consensus       278 ~~L~~dP~~Rps~~~~~  294 (708)
                      +||..||++|||++++.
T Consensus       239 ~~l~~~p~~Rpt~~~ll  255 (258)
T smart00219      239 QCWAEDPEDRPTFSELV  255 (258)
T ss_pred             HHCcCChhhCcCHHHHH
Confidence            99999999999999875


No 276
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00  E-value=2.6e-39  Score=338.39  Aligned_cols=249  Identities=32%  Similarity=0.531  Sum_probs=211.7

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC---CCCeeeEEEEEEeCCEEEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD---HPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~~~~ylV  123 (708)
                      .|++.+.||+|+||.||+|.+..+++.||||++.... .......+.+|+.+++.++   ||||+++++++.....+|+|
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv   80 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII   80 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence            4888999999999999999999999999999987543 2334566889999999986   99999999999999999999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Ccc
Q psy2648         124 MEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLD  202 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~  202 (708)
                      |||+++++|.+++.. +.+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++....... ...
T Consensus        81 ~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~  159 (277)
T cd06917          81 MEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRS  159 (277)
T ss_pred             EecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccc
Confidence            999999999998854 589999999999999999999999999999999999999999999999999987654332 234


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-CCCC-CCCHHHHHHHHHhh
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIPF-YMSTDCENLLKKFL  280 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~-~~p~-~~s~~~~~Li~~~L  280 (708)
                      ...|++.|+|||.+.+....+.++|+|||||++|+|++|..||.+.+.......+..... .++. ..+.++.++|.+||
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  239 (277)
T cd06917         160 TFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAACL  239 (277)
T ss_pred             cccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHHc
Confidence            457899999999987654445789999999999999999999988776655444433322 2333 26789999999999


Q ss_pred             hhCCCCCCCHHHHh---hhh
Q psy2648         281 VLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       281 ~~dP~~Rps~~~~~---~~~  297 (708)
                      ..||++||+++++.   |+.
T Consensus       240 ~~~p~~R~~~~~il~~~~~~  259 (277)
T cd06917         240 DEEPKERLSAEELLKSKWIK  259 (277)
T ss_pred             CCCcccCcCHHHHhhChHhh
Confidence            99999999999887   664


No 277
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=3.9e-39  Score=347.92  Aligned_cols=252  Identities=27%  Similarity=0.447  Sum_probs=212.7

Q ss_pred             CCCccCCeEEEeEEcccCceEEEEEEEcCC-------CcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEE
Q psy2648          41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPT-------GKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQ  112 (708)
Q Consensus        41 ~~~~~~~Y~i~~~LG~G~fg~V~la~~~~t-------g~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~  112 (708)
                      .+....+|++++.||+|+||.||+|++...       +..||+|++... ......+.+.+|+++++++ +||||+++++
T Consensus         7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~   85 (334)
T cd05100           7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLG   85 (334)
T ss_pred             cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence            344445799999999999999999987532       236999988643 2334556788999999999 7999999999


Q ss_pred             EEEeCCEEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCE
Q psy2648         113 VIETEKTLYLVMEYASGGEVFDYLVLHG----------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL  176 (708)
Q Consensus       113 ~~~~~~~~ylVmEy~~gg~L~~~i~~~~----------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNI  176 (708)
                      ++.....+|+||||+++|+|.+++....                .++..++..++.||+.||.|||++||+||||||+||
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  165 (334)
T cd05100          86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV  165 (334)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence            9999999999999999999999997542                367788889999999999999999999999999999


Q ss_pred             EEcCCCcEEEEeccCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHH
Q psy2648         177 LLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRE  252 (708)
Q Consensus       177 Lld~~~~iKL~DFGls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~  252 (708)
                      |++.++.+||+|||+++.......   .....++..|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..+
T Consensus       166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~~g~~p~~~~~~~~  244 (334)
T cd05100         166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLLWEIFTLGGSPYPGIPVEE  244 (334)
T ss_pred             EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcC-chhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            999999999999999876533221   1222345679999999887775 78999999999999998 999999999888


Q ss_pred             HHHHHHcCCC-CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         253 LRERVLRGKY-RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       253 l~~~i~~~~~-~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +...+..+.. ..|...+.++.+||.+||..+|.+||+++++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell  287 (334)
T cd05100         245 LFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLV  287 (334)
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence            8888876543 45667789999999999999999999999887


No 278
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00  E-value=5.8e-39  Score=339.29  Aligned_cols=252  Identities=29%  Similarity=0.478  Sum_probs=206.4

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      +++|++.+.||+|+||.||+|.+..+++.||||.+............+.+|+++++.++||||+++++++.+...+|+||
T Consensus         1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (294)
T PLN00009          1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF   80 (294)
T ss_pred             CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence            36899999999999999999999999999999998765443334456788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcC-CCcEEEEeccCccccCCC-CC
Q psy2648         125 EYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS-EMNIKIADFGFSNEFTPG-NK  200 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~--l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~-~~~iKL~DFGls~~~~~~-~~  200 (708)
                      ||++ ++|.+++.....  +++..+..++.||+.||+|||+++|+||||||+||+++. ++.+||+|||++...... ..
T Consensus        81 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~  159 (294)
T PLN00009         81 EYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT  159 (294)
T ss_pred             eccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence            9996 588888866543  578888999999999999999999999999999999985 457999999998754322 22


Q ss_pred             ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC--C-----------------
Q psy2648         201 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG--K-----------------  261 (708)
Q Consensus       201 ~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~--~-----------------  261 (708)
                      .....+++.|+|||++.+......++|||||||++|+|++|..||...+..+...++...  .                 
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (294)
T PLN00009        160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS  239 (294)
T ss_pred             cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence            234467889999999876544457899999999999999999999877655444333210  0                 


Q ss_pred             ----CC------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhh
Q psy2648         262 ----YR------IPFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       262 ----~~------~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                          +.      .....++++.++|.+||..||++||+++++.   |+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~  288 (294)
T PLN00009        240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK  288 (294)
T ss_pred             hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHh
Confidence                00      0124578899999999999999999999887   654


No 279
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00  E-value=3.6e-39  Score=337.03  Aligned_cols=247  Identities=26%  Similarity=0.448  Sum_probs=212.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcC-----CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVP-----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~-----tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  120 (708)
                      .+|++++.||+|+||.||+|+++.     +.+.||+|.+.... .....+.+.+|++++++++||||+++++++.+....
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   83 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH   83 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence            479999999999999999999764     34679999886532 223456788999999999999999999999998999


Q ss_pred             EEEEeccCCCChHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccC
Q psy2648         121 YLVMEYASGGEVFDYLVLHG---------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF  191 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~---------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGl  191 (708)
                      |+||||+++|+|.+++....         .+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~  163 (275)
T cd05046          84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSL  163 (275)
T ss_pred             eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccccc
Confidence            99999999999999998765         689999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCC--CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCCC--CCC
Q psy2648         192 SNEFTPG--NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYR--IPF  266 (708)
Q Consensus       192 s~~~~~~--~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~~--~p~  266 (708)
                      +......  .......+++.|+|||.+.+..+ .+++|||||||++|+|++ |..||.+.+...+...+..+...  .+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  242 (275)
T cd05046         164 SKDVYNSEYYKLRNALIPLRWLAPEAVQEDDF-STKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPE  242 (275)
T ss_pred             ccccCcccccccCCceeEEeecChhhhccCCC-CchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCC
Confidence            8644221  12234456778999999887765 478999999999999998 89999888888888888766544  355


Q ss_pred             CCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         267 YMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       267 ~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ..+..+.++|.+||..||.+||+++++.
T Consensus       243 ~~~~~l~~~i~~~l~~~p~~Rp~~~~~l  270 (275)
T cd05046         243 GCPSRLYKLMTRCWAVNPKDRPSFSELV  270 (275)
T ss_pred             CCCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence            6788999999999999999999999876


No 280
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00  E-value=6.2e-39  Score=332.33  Aligned_cols=246  Identities=28%  Similarity=0.472  Sum_probs=212.0

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      ..++|++.+.||+|+||.||+|.+. .++.||||.+......   .+.+.+|+.+++.++||||+++++++.....+|+|
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   79 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIV   79 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEE
Confidence            3467999999999999999999975 4578999998765433   35678999999999999999999999998999999


Q ss_pred             EeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC-
Q psy2648         124 MEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-  200 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~-  200 (708)
                      |||+++++|.+++....  .+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++..+..... 
T Consensus        80 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~  159 (261)
T cd05034          80 TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT  159 (261)
T ss_pred             EeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhh
Confidence            99999999999997653  689999999999999999999999999999999999999999999999999876543211 


Q ss_pred             -ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHH
Q psy2648         201 -LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYMSTDCENLLK  277 (708)
Q Consensus       201 -~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~p~~~s~~~~~Li~  277 (708)
                       .....++..|+|||.+.+..+ ++++|||||||++|+|++ |+.||.+.+..+..+.+..+ ....|...+.++.+++.
T Consensus       160 ~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  238 (261)
T cd05034         160 AREGAKFPIKWTAPEAANYGRF-TIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLML  238 (261)
T ss_pred             hhhccCCCccccCHHHhccCCc-CchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence             112234568999999987766 478999999999999998 99999998888888887765 23455667889999999


Q ss_pred             HhhhhCCCCCCCHHHHh
Q psy2648         278 KFLVLNPAKRASLEVSG  294 (708)
Q Consensus       278 ~~L~~dP~~Rps~~~~~  294 (708)
                      +||..||++||+++++.
T Consensus       239 ~~l~~~p~~Rp~~~~l~  255 (261)
T cd05034         239 QCWDKDPEERPTFEYLQ  255 (261)
T ss_pred             HHcccCcccCCCHHHHH
Confidence            99999999999999876


No 281
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00  E-value=2.4e-39  Score=339.79  Aligned_cols=246  Identities=32%  Similarity=0.538  Sum_probs=205.1

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYA  127 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~  127 (708)
                      |++.+.||.|++|.||+|.+..+|+.||||++............+.+|+++++.++||||+++++++.+....|+||||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            67899999999999999999999999999999765443334456788999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCcccc
Q psy2648         128 SGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTF  204 (708)
Q Consensus       128 ~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~~~  204 (708)
                      + ++|.+++....  .+++..+..++.||+.||+|||+++++||||+|+|||++.++.+||+|||++...... ......
T Consensus        81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~  159 (283)
T cd07835          81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHE  159 (283)
T ss_pred             C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCcc
Confidence            5 68999987766  7899999999999999999999999999999999999999999999999998754322 122334


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC------------------------
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG------------------------  260 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~------------------------  260 (708)
                      .+++.|+|||++.+......++|||||||++|+|++|..||.+.+.......+.+.                        
T Consensus       160 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd07835         160 VVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPK  239 (283)
T ss_pred             ccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccc
Confidence            56889999999876543347899999999999999999999876654332222211                        


Q ss_pred             -CC----CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         261 -KY----RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       261 -~~----~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                       ..    ......+.++.++|.+||+.||.+|||+++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il  278 (283)
T cd07835         240 WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAAL  278 (283)
T ss_pred             ccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence             00    01234678899999999999999999999876


No 282
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00  E-value=1.2e-39  Score=345.46  Aligned_cols=250  Identities=30%  Similarity=0.508  Sum_probs=212.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ..|.....||+|+||.||++.+..+++.||||.+....  ....+.+.+|+.+++.++||||+++++.+...+..|+|||
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e   99 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVME   99 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEe
Confidence            34666788999999999999999999999999986532  2345568899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCcccc
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~~~  204 (708)
                      |+++++|.+++. .+.+++.++..++.||+.||+|||+++|+||||||+||++++++.+||+|||++...... ......
T Consensus       100 ~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~  178 (292)
T cd06658         100 FLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSL  178 (292)
T ss_pred             CCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCcee
Confidence            999999999774 567999999999999999999999999999999999999999999999999998654322 223456


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHHHHHhhh
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---RIPFYMSTDCENLLKKFLV  281 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~---~~p~~~s~~~~~Li~~~L~  281 (708)
                      +|++.|+|||++.+..++ .++|||||||++|+|++|..||...+..+....+.....   ..+...+.++.++|.+||.
T Consensus       179 ~~~~~y~aPE~~~~~~~~-~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  257 (292)
T cd06658         179 VGTPYWMAPEVISRLPYG-TEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLV  257 (292)
T ss_pred             ecCccccCHHHHccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHcc
Confidence            789999999999877764 789999999999999999999998877666555544321   1223468899999999999


Q ss_pred             hCCCCCCCHHHHh---hhhhC
Q psy2648         282 LNPAKRASLEVSG---EVTLG  299 (708)
Q Consensus       282 ~dP~~Rps~~~~~---~~~~~  299 (708)
                      .||.+|||++++.   |+...
T Consensus       258 ~~P~~Rpt~~~il~~~~~~~~  278 (292)
T cd06658         258 REPSQRATAQELLQHPFLKLA  278 (292)
T ss_pred             CChhHCcCHHHHhhChhhhcc
Confidence            9999999999987   76644


No 283
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00  E-value=2e-39  Score=359.17  Aligned_cols=251  Identities=25%  Similarity=0.398  Sum_probs=208.8

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEc-----CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEE
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHV-----PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVIE  115 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~-----~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~  115 (708)
                      +...++|.+.+.||+|+||.||+|.+.     .+++.||||+++.... ....+.+.+|+++|..++ |||||++++++.
T Consensus        33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            334457899999999999999999964     4557899999976432 334457889999999998 999999999999


Q ss_pred             eCCEEEEEEeccCCCChHHHHHHcC-------------------------------------------------------
Q psy2648         116 TEKTLYLVMEYASGGEVFDYLVLHG-------------------------------------------------------  140 (708)
Q Consensus       116 ~~~~~ylVmEy~~gg~L~~~i~~~~-------------------------------------------------------  140 (708)
                      .+..+|||||||++|+|.+++...+                                                       
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP  191 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence            9999999999999999999996532                                                       


Q ss_pred             -------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEE
Q psy2648         141 -------------------------------------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL  177 (708)
Q Consensus       141 -------------------------------------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNIL  177 (708)
                                                                 .+++..++.++.||+.||+|||+++|+||||||+|||
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiL  271 (401)
T cd05107         192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVL  271 (401)
T ss_pred             hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEE
Confidence                                                       2566778889999999999999999999999999999


Q ss_pred             EcCCCcEEEEeccCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHH
Q psy2648         178 LDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLREL  253 (708)
Q Consensus       178 ld~~~~iKL~DFGls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l  253 (708)
                      +++++.+||+|||+++.......   ....++++.|+|||++.+..+ ++++|||||||++|||++ |..||......+.
T Consensus       272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~  350 (401)
T cd05107         272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLY-TTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ  350 (401)
T ss_pred             EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCC-CcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH
Confidence            99999999999999876432221   223467889999999987776 478999999999999998 9999987655544


Q ss_pred             -HHHHHcC-CCCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         254 -RERVLRG-KYRIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       254 -~~~i~~~-~~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                       ...+..+ ....|...+.++.+||.+||..||.+||+++++.
T Consensus       351 ~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell  393 (401)
T cd05107         351 FYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLV  393 (401)
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence             3444444 2345667899999999999999999999999887


No 284
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00  E-value=3.3e-39  Score=333.59  Aligned_cols=240  Identities=28%  Similarity=0.476  Sum_probs=206.2

Q ss_pred             eEEcccCceEEEEEEEcC-CCc--EEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Q psy2648          52 KTIGKGNFAKVKLAKHVP-TGK--EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYAS  128 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~-tg~--~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~  128 (708)
                      +.||+|+||.||+|.+.. .++  .||||.+...... ...+.+.+|++++++++||||+++++++.. ..+|+||||++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~   78 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP   78 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence            468999999999999865 333  6999999876543 556778899999999999999999999988 88999999999


Q ss_pred             CCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC----Ccc
Q psy2648         129 GGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN----KLD  202 (708)
Q Consensus       129 gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~----~~~  202 (708)
                      +++|.+++....  .+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||++..+....    ...
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  158 (257)
T cd05040          79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE  158 (257)
T ss_pred             CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceeccc
Confidence            999999997764  68999999999999999999999999999999999999999999999999987664321    112


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHh
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK--YRIPFYMSTDCENLLKKF  279 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~--~~~p~~~s~~~~~Li~~~  279 (708)
                      ...++..|+|||++.+..++ .++|||||||++|+|++ |..||...+..++...+....  ...|...+.++.+++.+|
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~-~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  237 (257)
T cd05040         159 HLKVPFAWCAPESLRTRTFS-HASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQC  237 (257)
T ss_pred             CCCCCceecCHHHhcccCcC-chhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHH
Confidence            34577889999999887764 78999999999999998 999999888877777666432  234556788999999999


Q ss_pred             hhhCCCCCCCHHHHh
Q psy2648         280 LVLNPAKRASLEVSG  294 (708)
Q Consensus       280 L~~dP~~Rps~~~~~  294 (708)
                      |..+|++||+++++.
T Consensus       238 l~~~p~~Rps~~~~~  252 (257)
T cd05040         238 WAHNPADRPTFAALR  252 (257)
T ss_pred             CCCCcccCCCHHHHH
Confidence            999999999999876


No 285
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00  E-value=3.4e-39  Score=334.40  Aligned_cols=239  Identities=33%  Similarity=0.549  Sum_probs=205.3

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHH-HhCCCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIM-KMLDHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il-~~l~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||.||+|.+..+++.||||++.+.... ......+..|..++ ..++||||++++++++..+.+|+||||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            5799999999999999999999999999765432 22233455565554 456899999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccccccCCc
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP  209 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~~Gt~~  209 (708)
                      ++|.+++...+.+++.++..++.||+.||.|||+++|+||||+|+|||++.++.+||+|||++.....   .....|++.
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---~~~~~~~~~  158 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---NKKFVGTPD  158 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc---cccCCCCcC
Confidence            99999998888899999999999999999999999999999999999999999999999999875432   234578899


Q ss_pred             ccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHhhhhCCC
Q psy2648         210 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP----FYMSTDCENLLKKFLVLNPA  285 (708)
Q Consensus       210 Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p----~~~s~~~~~Li~~~L~~dP~  285 (708)
                      |+|||.+.+..+ +.++|||||||++|+|++|..||...+..++...+..+....+    ..+++++.++|.+||+.||+
T Consensus       159 y~~pe~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~  237 (260)
T cd05611         159 YLAPETILGVGD-DKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPA  237 (260)
T ss_pred             ccChhhhcCCCC-cchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHH
Confidence            999999988775 4799999999999999999999999888888887776654332    35789999999999999999


Q ss_pred             CCCCH---HHHh
Q psy2648         286 KRASL---EVSG  294 (708)
Q Consensus       286 ~Rps~---~~~~  294 (708)
                      +||++   ++++
T Consensus       238 ~R~~~~~~~~~l  249 (260)
T cd05611         238 KRLGANGYQEIK  249 (260)
T ss_pred             HccCCCcHHHHH
Confidence            99965   5654


No 286
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00  E-value=1.9e-39  Score=335.15  Aligned_cols=240  Identities=38%  Similarity=0.616  Sum_probs=213.5

Q ss_pred             EcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCCh
Q psy2648          54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEV  132 (708)
Q Consensus        54 LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg~L  132 (708)
                      ||+|+||.||+|.+..+++.||+|++.+... .....+.+.+|+++++.++||||+++++.++....+|+||||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999999999999999999976543 234456788999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC---------Cccc
Q psy2648         133 FDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN---------KLDT  203 (708)
Q Consensus       133 ~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~---------~~~~  203 (708)
                      .+++...+.+++.++..++.||+.||.|||+++|+||||+|+||+++.++.+||+|||++.......         ....
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  160 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKR  160 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccC
Confidence            9999887889999999999999999999999999999999999999999999999999987543221         2234


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHhhh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYM--STDCENLLKKFLV  281 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~--s~~~~~Li~~~L~  281 (708)
                      .++++.|+|||.+.+..+ +.++||||||+++|+|++|..||...+..++...+..+.+..|...  +.++.++|++||+
T Consensus       161 ~~~~~~~~~Pe~~~~~~~-~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  239 (265)
T cd05579         161 IVGTPDYIAPEVILGQGH-SKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLV  239 (265)
T ss_pred             cccCccccCHHHhcCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhc
Confidence            578889999999987765 4789999999999999999999999999998888888777777665  8999999999999


Q ss_pred             hCCCCCCCH---HHHh
Q psy2648         282 LNPAKRASL---EVSG  294 (708)
Q Consensus       282 ~dP~~Rps~---~~~~  294 (708)
                      .||.+|||+   .+++
T Consensus       240 ~~p~~Rpt~~~~~~~l  255 (265)
T cd05579         240 PDPEKRLGAKSIEEIK  255 (265)
T ss_pred             CCHhhcCCCccHHHHh
Confidence            999999999   6555


No 287
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=100.00  E-value=7.7e-40  Score=342.99  Aligned_cols=248  Identities=29%  Similarity=0.480  Sum_probs=212.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      .|++.+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|+++++.++||||+++++++..+..+|+||||
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence            47778889999999999999999999999999875533 23456788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccccc
Q psy2648         127 ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFC  205 (708)
Q Consensus       127 ~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~~~  205 (708)
                      +++++|.+++. .+.+++..++.++.||+.||.|||+++|+|+||+|+||++++++.+||+|||++....... ......
T Consensus        84 ~~~~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~  162 (277)
T cd06642          84 LGGGSALDLLK-PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV  162 (277)
T ss_pred             cCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhccc
Confidence            99999999875 4678999999999999999999999999999999999999999999999999987654322 223456


Q ss_pred             cCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHhhhhCC
Q psy2648         206 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLLKKFLVLNP  284 (708)
Q Consensus       206 Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~~~L~~dP  284 (708)
                      |+..|+|||++.+..++ .++|||||||++|+|++|..||...........+..+. ..++...+.++.++|.+||..+|
T Consensus       163 ~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  241 (277)
T cd06642         163 GTPFWMAPEVIKQSAYD-FKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDP  241 (277)
T ss_pred             CcccccCHHHhCcCCCc-hhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCc
Confidence            88999999999887764 78999999999999999999998776665555544432 23445578899999999999999


Q ss_pred             CCCCCHHHHh---hhh
Q psy2648         285 AKRASLEVSG---EVT  297 (708)
Q Consensus       285 ~~Rps~~~~~---~~~  297 (708)
                      ++||+++++.   |+.
T Consensus       242 ~~Rp~~~~il~~~~~~  257 (277)
T cd06642         242 RFRPTAKELLKHKFIT  257 (277)
T ss_pred             ccCcCHHHHHHhHHHH
Confidence            9999999887   654


No 288
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00  E-value=9.1e-39  Score=330.12  Aligned_cols=246  Identities=26%  Similarity=0.455  Sum_probs=211.3

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ...|++.+.||+|+||.||+|.+. .+..+|||++......   ...+.+|+++++.++||||++++++++....+|+||
T Consensus         3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   78 (256)
T cd05112           3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVF   78 (256)
T ss_pred             hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEE
Confidence            457999999999999999999875 4778999998755433   245788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC--c
Q psy2648         125 EYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--L  201 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~--~  201 (708)
                      ||+++++|.+++... +.++++.++.++.|++.||+|||+++++||||||+||+++.++.+||+|||++........  .
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~  158 (256)
T cd05112          79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS  158 (256)
T ss_pred             EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCccccc
Confidence            999999999998764 5689999999999999999999999999999999999999999999999999875432211  1


Q ss_pred             cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHh
Q psy2648         202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLLKKF  279 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~~~  279 (708)
                      ....++..|+|||++.+..++ .++|||||||++|+|++ |..||......++.+.+..+. ...|...+.++.+|+.+|
T Consensus       159 ~~~~~~~~~~aPe~~~~~~~~-~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  237 (256)
T cd05112         159 TGTKFPVKWSSPEVFSFSKYS-SKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHC  237 (256)
T ss_pred             CCCccchhhcCHhHhccCCcC-hHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHH
Confidence            122345689999999877764 78999999999999998 999999988888888877653 334666789999999999


Q ss_pred             hhhCCCCCCCHHHHhh
Q psy2648         280 LVLNPAKRASLEVSGE  295 (708)
Q Consensus       280 L~~dP~~Rps~~~~~~  295 (708)
                      |..||++||+++++..
T Consensus       238 l~~~p~~Rp~~~~~l~  253 (256)
T cd05112         238 WKERPEDRPSFSLLLH  253 (256)
T ss_pred             cccChhhCCCHHHHHH
Confidence            9999999999998763


No 289
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00  E-value=3.7e-39  Score=348.68  Aligned_cols=252  Identities=26%  Similarity=0.436  Sum_probs=208.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC-----CEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE-----KTL  120 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~~  120 (708)
                      .+|++.+.||+|+||.||+|++..+++.||||.+............+.+|+.+++.++||||+++++++...     ..+
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            479999999999999999999999999999999876543334455678999999999999999999987654     358


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-C
Q psy2648         121 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-N  199 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~  199 (708)
                      ||||||+. ++|.+++...+.+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||++...... .
T Consensus        85 ~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~  163 (337)
T cd07858          85 YIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGD  163 (337)
T ss_pred             EEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcc
Confidence            99999996 689999988889999999999999999999999999999999999999999999999999998765432 2


Q ss_pred             CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc--------------------
Q psy2648         200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR--------------------  259 (708)
Q Consensus       200 ~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~--------------------  259 (708)
                      ......++..|+|||++.+....+.++|||||||++|+|++|+.||.+.+..+....+..                    
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (337)
T cd07858         164 FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARR  243 (337)
T ss_pred             cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhH
Confidence            334567899999999986533345799999999999999999999987654332222210                    


Q ss_pred             ---CCC--------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         260 ---GKY--------RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       260 ---~~~--------~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                         ...        ......++++.+||++||+.||++|||+++++   |+..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~  296 (337)
T cd07858         244 YIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS  296 (337)
T ss_pred             HHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence               000        01124688999999999999999999999987   7653


No 290
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00  E-value=4.2e-39  Score=341.21  Aligned_cols=248  Identities=24%  Similarity=0.382  Sum_probs=204.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcC----------------CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeee
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVP----------------TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVK  109 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~----------------tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~  109 (708)
                      ++|++.+.||+|+||.||+|++..                +...||||++.... .....+.+.+|+++|+.++||||++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcce
Confidence            479999999999999999986543                34579999986542 3344567889999999999999999


Q ss_pred             EEEEEEeCCEEEEEEeccCCCChHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEE
Q psy2648         110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHG-----------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL  178 (708)
Q Consensus       110 l~~~~~~~~~~ylVmEy~~gg~L~~~i~~~~-----------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILl  178 (708)
                      +++++.....+|+||||+.+++|.+++....           .+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili  163 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV  163 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEE
Confidence            9999999999999999999999999987643           35677899999999999999999999999999999999


Q ss_pred             cCCCcEEEEeccCccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc--CCCCCCCCCHHHH
Q psy2648         179 DSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS--GSLPFDGSTLREL  253 (708)
Q Consensus       179 d~~~~iKL~DFGls~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt--G~~Pf~~~~~~~l  253 (708)
                      +.++.+||+|||+++.+.....   .....+++.|+|||+..+..++ .++|||||||++|+|++  |..||...+..+.
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~  242 (296)
T cd05095         164 GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFT-TASDVWAFGVTLWEILTLCKEQPYSQLSDEQV  242 (296)
T ss_pred             cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCcc-chhhhhHHHHHHHHHHHhCCCCCccccChHHH
Confidence            9999999999999876533221   1223446789999998777764 79999999999999998  8899988776665


Q ss_pred             HHHHHc--------CCCCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHhh
Q psy2648         254 RERVLR--------GKYRIPFYMSTDCENLLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       254 ~~~i~~--------~~~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      ...+..        .....|...++.+.+||.+||+.||.+||+++++..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         243 IENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            543321        112345567789999999999999999999998763


No 291
>KOG2345|consensus
Probab=100.00  E-value=1.1e-40  Score=328.53  Aligned_cols=247  Identities=27%  Similarity=0.428  Sum_probs=205.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEE-----eCCEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIE-----TEKTL  120 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~-----~~~~~  120 (708)
                      .+|+|.+.||+|+|+.|+++++..+++.||+|.|....  .++.+..++|++..++++||||+++++..-     .....
T Consensus        21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~   98 (302)
T KOG2345|consen   21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA   98 (302)
T ss_pred             ceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence            48999999999999999999999999999999987554  466788999999999999999999987643     23469


Q ss_pred             EEEEeccCCCChHHHHHHc---C-CCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCCEEEcCCCcEEEEeccCccc
Q psy2648         121 YLVMEYASGGEVFDYLVLH---G-RMKEKEARAKFRQIVSAVQYCHQKK--IIHRDLKAENLLLDSEMNIKIADFGFSNE  194 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~---~-~l~e~~~~~i~~QI~~aL~yLH~~g--IvHRDLKPeNILld~~~~iKL~DFGls~~  194 (708)
                      ||++.|...|+|.++|...   + .++|.++..||.+|++||++||+..  ++||||||.|||+.+.+.++|.|||.++.
T Consensus        99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~  178 (302)
T KOG2345|consen   99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQ  178 (302)
T ss_pred             EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccc
Confidence            9999999999999998653   3 6899999999999999999999998  99999999999999999999999998765


Q ss_pred             cCC---CC-------CccccccCCcccccccccCCcc--CCCchhHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHcC
Q psy2648         195 FTP---GN-------KLDTFCGSPPYAAPELFQGKKY--DGPEVDVWSLGVILYTLVSGSLPFDGSTLR--ELRERVLRG  260 (708)
Q Consensus       195 ~~~---~~-------~~~~~~Gt~~Y~APE~l~~~~~--~~~~~DIWSlGvilyelltG~~Pf~~~~~~--~l~~~i~~~  260 (708)
                      ..-   ++       ....-..|.+|.|||++.-+.+  .+.++|||||||+||+|+.|.-||+..-.+  .+.-.|..+
T Consensus       179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~  258 (302)
T KOG2345|consen  179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNA  258 (302)
T ss_pred             cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeecc
Confidence            321   11       0112346889999999864433  257999999999999999999999642111  122345666


Q ss_pred             CCCCCC--CCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         261 KYRIPF--YMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       261 ~~~~p~--~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ++.+|.  ..|+.+.+||+.||++||.+||++.++.
T Consensus       259 q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll  294 (302)
T KOG2345|consen  259 QISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELL  294 (302)
T ss_pred             ccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHH
Confidence            777774  4789999999999999999999998765


No 292
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=100.00  E-value=6.5e-39  Score=336.26  Aligned_cols=248  Identities=22%  Similarity=0.357  Sum_probs=211.5

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcC----CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEe-CCE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIET-EKT  119 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~----tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~  119 (708)
                      .++|++.+.||+|+||.||+|.+..    ++..||+|++... ......+.+.+|+.+|+.++||||+++++++.. ...
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            4589999999999999999999876    3688999988643 344556678899999999999999999998665 567


Q ss_pred             EEEEEeccCCCChHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccC
Q psy2648         120 LYLVMEYASGGEVFDYLVLH--------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF  191 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~--------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGl  191 (708)
                      .++++||+++++|.+++...        ..+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~  163 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNAL  163 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCC
Confidence            89999999999999998764        3588999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCC
Q psy2648         192 SNEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPF  266 (708)
Q Consensus       192 s~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~  266 (708)
                      ++.+.....   .....++..|+|||++.+..++ .++|||||||++|+|++ |+.||...+..++...+..+. +..+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~-~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  242 (280)
T cd05043         164 SRDLFPMDYHCLGDNENRPVKWMALESLVNKEYS-SASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQPI  242 (280)
T ss_pred             cccccCCceEEeCCCCCcchhccCHHHHhcCCCC-chhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCCCC
Confidence            986543321   1223456789999999877764 78999999999999999 999999988888877776652 23445


Q ss_pred             CCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         267 YMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       267 ~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ..++++.+++.+||..||++|||++++.
T Consensus       243 ~~~~~~~~li~~~l~~~p~~Rps~~~~~  270 (280)
T cd05043         243 NCPDELFAVMACCWALDPEERPSFSQLV  270 (280)
T ss_pred             cCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence            6688999999999999999999999877


No 293
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00  E-value=2e-39  Score=338.53  Aligned_cols=247  Identities=39%  Similarity=0.696  Sum_probs=220.7

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      +|++.+.||+|+||.||+|....+++.||||++.+.... ....+.+.+|+.+++.++ ||||+++++++...+.+|+||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL   81 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence            699999999999999999999999999999999875432 333456789999999998 999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-----
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-----  199 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-----  199 (708)
                      ||+++++|.+++...+.+++.++..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......     
T Consensus        82 e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~  161 (280)
T cd05581          82 EYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESN  161 (280)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccC
Confidence            999999999999988899999999999999999999999999999999999999999999999999987553221     


Q ss_pred             ----------------CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC
Q psy2648         200 ----------------KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR  263 (708)
Q Consensus       200 ----------------~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~  263 (708)
                                      ......|+..|+|||++.+..+ +.++|||||||++|+|++|..||...+.....+.+......
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~  240 (280)
T cd05581         162 KGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPA-GKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYS  240 (280)
T ss_pred             CCCCccccccccccccccccccCCccccCHHHhCCCCC-ChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCC
Confidence                            1234567899999999887665 47899999999999999999999988877777888888888


Q ss_pred             CCCCCCHHHHHHHHHhhhhCCCCCCCH----HHHh
Q psy2648         264 IPFYMSTDCENLLKKFLVLNPAKRASL----EVSG  294 (708)
Q Consensus       264 ~p~~~s~~~~~Li~~~L~~dP~~Rps~----~~~~  294 (708)
                      +|...++++.+||.+||..||.+||++    ++++
T Consensus       241 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll  275 (280)
T cd05581         241 FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELK  275 (280)
T ss_pred             CCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHh
Confidence            888899999999999999999999999    7765


No 294
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00  E-value=5.8e-39  Score=330.59  Aligned_cols=240  Identities=32%  Similarity=0.483  Sum_probs=206.7

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGE  131 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg~  131 (708)
                      +.||+|+||.||+|.+.. ++.||+|++...... ...+.+.+|++++++++||||+++++++.+....|+||||+++++
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   78 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS   78 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence            469999999999999887 999999998765432 345678899999999999999999999999999999999999999


Q ss_pred             hHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc---cccccC
Q psy2648         132 VFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL---DTFCGS  207 (708)
Q Consensus       132 L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~---~~~~Gt  207 (708)
                      |.+++... ..+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++.........   ....++
T Consensus        79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~  158 (251)
T cd05041          79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP  158 (251)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence            99999764 46889999999999999999999999999999999999999999999999998755422111   122335


Q ss_pred             CcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHhhhhCCC
Q psy2648         208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYMSTDCENLLKKFLVLNPA  285 (708)
Q Consensus       208 ~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~p~~~s~~~~~Li~~~L~~dP~  285 (708)
                      ..|+|||++.+..+ +.++|||||||++|+|++ |..||...........+..+ ....|...+.++.++|.+||..||+
T Consensus       159 ~~y~~PE~~~~~~~-~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  237 (251)
T cd05041         159 IKWTAPEALNYGRY-TSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPE  237 (251)
T ss_pred             eccCChHhhccCCC-CcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChh
Confidence            67999999987766 479999999999999999 89999988887777777654 2345667889999999999999999


Q ss_pred             CCCCHHHHh
Q psy2648         286 KRASLEVSG  294 (708)
Q Consensus       286 ~Rps~~~~~  294 (708)
                      +||+++++.
T Consensus       238 ~Rp~~~ell  246 (251)
T cd05041         238 NRPSFSEIY  246 (251)
T ss_pred             hCcCHHHHH
Confidence            999999876


No 295
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00  E-value=1.1e-38  Score=327.44  Aligned_cols=247  Identities=31%  Similarity=0.532  Sum_probs=218.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--CEEEEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE--KTLYLVM  124 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~ylVm  124 (708)
                      +|.+.+.||+|+||.||+|.+..+++.|++|++..........+.+.+|+.++++++||||+++++.+...  ..+|+||
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            58899999999999999999999999999999987655455677889999999999999999999999988  8999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC---c
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---L  201 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~---~  201 (708)
                      ||+++++|.+++.....+++.++..++.|++.||.|||+++++|+||+|+||+++.++.+||+|||.+........   .
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  160 (260)
T cd06606          81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT  160 (260)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence            9999999999998888999999999999999999999999999999999999999999999999999877654432   3


Q ss_pred             cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHc--CCCCCCCCCCHHHHHHHHH
Q psy2648         202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST-LRELRERVLR--GKYRIPFYMSTDCENLLKK  278 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~-~~~l~~~i~~--~~~~~p~~~s~~~~~Li~~  278 (708)
                      ....++..|+|||.+.+..+ ..++||||||+++|+|++|..||.... .......+..  ....+|...+.++.++|.+
T Consensus       161 ~~~~~~~~y~~pE~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  239 (260)
T cd06606         161 GSVRGTPYWMAPEVIRGEEY-GRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRK  239 (260)
T ss_pred             cCCCCCccccCHhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHH
Confidence            45678999999999987765 478999999999999999999998765 3344444442  3345677789999999999


Q ss_pred             hhhhCCCCCCCHHHHh
Q psy2648         279 FLVLNPAKRASLEVSG  294 (708)
Q Consensus       279 ~L~~dP~~Rps~~~~~  294 (708)
                      ||..||++||++.++.
T Consensus       240 ~l~~~p~~Rp~~~~ll  255 (260)
T cd06606         240 CLRRDPKKRPTADELL  255 (260)
T ss_pred             hCcCChhhCCCHHHHh
Confidence            9999999999999876


No 296
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00  E-value=5.9e-39  Score=338.54  Aligned_cols=248  Identities=32%  Similarity=0.597  Sum_probs=211.2

Q ss_pred             CeEEEeEEcccCceEEEEEEEc---CCCcEEEEEEeccCCCC--hhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHV---PTGKEVAIKIIDKTQLN--PGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~---~tg~~vAvK~i~~~~~~--~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~  120 (708)
                      +|++.+.||+|+||.||+|++.   .+|+.||+|++.+....  ....+.+.+|+++|+.+ +||||++++++++.+..+
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            4899999999999999999875   48899999999764321  22345677899999999 599999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-
Q psy2648         121 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-  199 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-  199 (708)
                      |+||||+++++|.+++.....+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++....... 
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  160 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV  160 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence            9999999999999999988889999999999999999999999999999999999999999999999999987654322 


Q ss_pred             -CccccccCCcccccccccCCc-cCCCchhHHHHHHHHHHHHcCCCCCCCC----CHHHHHHHHHcCCCCCCCCCCHHHH
Q psy2648         200 -KLDTFCGSPPYAAPELFQGKK-YDGPEVDVWSLGVILYTLVSGSLPFDGS----TLRELRERVLRGKYRIPFYMSTDCE  273 (708)
Q Consensus       200 -~~~~~~Gt~~Y~APE~l~~~~-~~~~~~DIWSlGvilyelltG~~Pf~~~----~~~~l~~~i~~~~~~~p~~~s~~~~  273 (708)
                       .....+|+..|+|||.+.+.. ..+.++|||||||++|+|++|..||...    ...++.+.+......+|...++.+.
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (290)
T cd05613         161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAK  240 (290)
T ss_pred             cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCccCCHHHH
Confidence             223567999999999987532 2347899999999999999999999643    3455666666666677778899999


Q ss_pred             HHHHHhhhhCCCCCC-----CHHHHh
Q psy2648         274 NLLKKFLVLNPAKRA-----SLEVSG  294 (708)
Q Consensus       274 ~Li~~~L~~dP~~Rp-----s~~~~~  294 (708)
                      +||++||..||++||     +++++.
T Consensus       241 ~ll~~~l~~~p~~R~~~~~~~~~~l~  266 (290)
T cd05613         241 DIIQRLLMKDPKKRLGCGPSDADEIK  266 (290)
T ss_pred             HHHHHHhcCCHHHhcCCCCCCHHHHH
Confidence            999999999999998     556554


No 297
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00  E-value=4.2e-39  Score=336.74  Aligned_cols=238  Identities=31%  Similarity=0.528  Sum_probs=199.9

Q ss_pred             cCCeEEEeEE--cccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHh-CCCCCeeeEEEEEEeCCEEE
Q psy2648          45 IGKYKLLKTI--GKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKM-LDHPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        45 ~~~Y~i~~~L--G~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~~~~~y  121 (708)
                      .+.|++.+.+  |+|+||.||+++++.+++.+|+|++.+.....       .|+.+... .+||||+++++.+...+.+|
T Consensus        13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~   85 (267)
T PHA03390         13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV   85 (267)
T ss_pred             HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence            4567777766  99999999999999999999999987654321       12222222 27999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCC-cEEEEeccCccccCCCCC
Q psy2648         122 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNK  200 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~-~iKL~DFGls~~~~~~~~  200 (708)
                      +||||+++++|.+++..+..+++.+++.++.||+.||.|||+.||+||||||+||+++.++ .++|+|||++......  
T Consensus        86 iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~--  163 (267)
T PHA03390         86 LIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP--  163 (267)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC--
Confidence            9999999999999998888999999999999999999999999999999999999999998 9999999998755322  


Q ss_pred             ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHH-----HHHHHHcCCCCCCCCCCHHHHHH
Q psy2648         201 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRE-----LRERVLRGKYRIPFYMSTDCENL  275 (708)
Q Consensus       201 ~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~-----l~~~i~~~~~~~p~~~s~~~~~L  275 (708)
                       ....|++.|+|||++.+..++ +++|||||||++|+|++|..||.......     +.... ......+...++++.+|
T Consensus       164 -~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l  240 (267)
T PHA03390        164 -SCYDGTLDYFSPEKIKGHNYD-VSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNANDF  240 (267)
T ss_pred             -ccCCCCCcccChhhhcCCCCC-chhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHHHHH
Confidence             245789999999999888775 78999999999999999999998654332     32332 33344555789999999


Q ss_pred             HHHhhhhCCCCCCC-HHHHh
Q psy2648         276 LKKFLVLNPAKRAS-LEVSG  294 (708)
Q Consensus       276 i~~~L~~dP~~Rps-~~~~~  294 (708)
                      |.+||+.||.+||+ +++++
T Consensus       241 i~~~l~~~p~~R~~~~~~~l  260 (267)
T PHA03390        241 VQSMLKYNINYRLTNYNEII  260 (267)
T ss_pred             HHHHhccChhhCCchHHHHh
Confidence            99999999999996 68877


No 298
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=100.00  E-value=2.3e-39  Score=349.74  Aligned_cols=252  Identities=26%  Similarity=0.466  Sum_probs=208.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEe----CCEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIET----EKTLY  121 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----~~~~y  121 (708)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++..........+.+.+|+.+|+.++||||++++++++.    ...+|
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            57999999999999999999999999999999998654444455678899999999999999999998863    35789


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC--
Q psy2648         122 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--  199 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~--  199 (708)
                      +||||+. ++|.+++...+.+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++.......  
T Consensus        85 lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  163 (334)
T cd07855          85 VVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE  163 (334)
T ss_pred             EEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC
Confidence            9999996 5899998877889999999999999999999999999999999999999999999999999987653221  


Q ss_pred             ---CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-----------------
Q psy2648         200 ---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR-----------------  259 (708)
Q Consensus       200 ---~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~-----------------  259 (708)
                         .....+|+..|+|||++.+....+.++|||||||++|+|++|+.||.+.+.......+..                 
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  243 (334)
T cd07855         164 HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDR  243 (334)
T ss_pred             CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhh
Confidence               123457899999999986643345789999999999999999999987654332222111                 


Q ss_pred             ---------CCCCCC-----CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         260 ---------GKYRIP-----FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       260 ---------~~~~~p-----~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                               .....+     ...+.++.++|++||+.||++||+++++.   |+..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~  299 (334)
T cd07855         244 VRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQ  299 (334)
T ss_pred             HHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhh
Confidence                     000111     23578999999999999999999999877   7753


No 299
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00  E-value=6.3e-39  Score=334.26  Aligned_cols=237  Identities=21%  Similarity=0.334  Sum_probs=195.0

Q ss_pred             eEEcccCceEEEEEEEcCC------------CcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE
Q psy2648          52 KTIGKGNFAKVKLAKHVPT------------GKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT  119 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~t------------g~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  119 (708)
                      +.||+|+||.||+|.....            ...||+|++....  ......+.+|+.+++.++||||+++++++..+..
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~   78 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE   78 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence            3689999999999985432            2368999876542  2344567889999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCc-------EEEEeccC
Q psy2648         120 LYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN-------IKIADFGF  191 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~-------iKL~DFGl  191 (708)
                      .++||||+++|+|..++... +.+++..+..++.||+.||+|||+++|+||||||+|||++.++.       +|++|||+
T Consensus        79 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~  158 (262)
T cd05077          79 NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI  158 (262)
T ss_pred             CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence            99999999999999988754 56899999999999999999999999999999999999987764       89999999


Q ss_pred             ccccCCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHH-cCCCCCCCCCHHHHHHHHHcCCCCCCCCCCH
Q psy2648         192 SNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV-SGSLPFDGSTLRELRERVLRGKYRIPFYMST  270 (708)
Q Consensus       192 s~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyell-tG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~  270 (708)
                      +.....   .....++..|+|||++.+....+.++|||||||++|+|+ .|..||......+.. .+..+.+......+.
T Consensus       159 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~  234 (262)
T cd05077         159 PITVLS---RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQCMLVTPSCK  234 (262)
T ss_pred             CccccC---cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcCccCCCCChH
Confidence            865432   234568889999999874333357899999999999998 599999877655543 333444444444568


Q ss_pred             HHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         271 DCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       271 ~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ++.+||.+||..||.+||++.++.
T Consensus       235 ~~~~li~~cl~~dp~~Rp~~~~il  258 (262)
T cd05077         235 ELADLMTHCMNYDPNQRPFFRAIM  258 (262)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHH
Confidence            899999999999999999999875


No 300
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00  E-value=4.5e-39  Score=337.78  Aligned_cols=236  Identities=22%  Similarity=0.321  Sum_probs=195.2

Q ss_pred             EEcccCceEEEEEEEcCCC------------------------cEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCee
Q psy2648          53 TIGKGNFAKVKLAKHVPTG------------------------KEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV  108 (708)
Q Consensus        53 ~LG~G~fg~V~la~~~~tg------------------------~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv  108 (708)
                      .||+|+||.||+|....++                        ..||+|++....  ......+.+|+.+++.++||||+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv   79 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA   79 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence            5899999999999864322                        358999886432  23345688899999999999999


Q ss_pred             eEEEEEEeCCEEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCC-----
Q psy2648         109 KLFQVIETEKTLYLVMEYASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM-----  182 (708)
Q Consensus       109 ~l~~~~~~~~~~ylVmEy~~gg~L~~~i~~-~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~-----  182 (708)
                      ++++++......|+||||+++|+|..++.. .+.+++..+..++.||+.||+|||+++|+||||||+|||++..+     
T Consensus        80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~  159 (274)
T cd05076          80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGT  159 (274)
T ss_pred             eEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCc
Confidence            999999999999999999999999998875 46789999999999999999999999999999999999998654     


Q ss_pred             --cEEEEeccCccccCCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHH-cCCCCCCCCCHHHHHHHHHc
Q psy2648         183 --NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV-SGSLPFDGSTLRELRERVLR  259 (708)
Q Consensus       183 --~iKL~DFGls~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyell-tG~~Pf~~~~~~~l~~~i~~  259 (708)
                        .+||+|||++......   ....+++.|+|||++.+....++++|||||||++|+|+ +|..||.+.+..+.... ..
T Consensus       160 ~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~  235 (274)
T cd05076         160 SPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-YE  235 (274)
T ss_pred             cceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-HH
Confidence              3899999987644322   23467889999999876433358999999999999995 69999988776655433 33


Q ss_pred             CCCCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         260 GKYRIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       260 ~~~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .....|...++++.++|.+||+.||++||+++++.
T Consensus       236 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il  270 (274)
T cd05076         236 KKHRLPEPSCKELATLISQCLTYEPTQRPSFRTIL  270 (274)
T ss_pred             hccCCCCCCChHHHHHHHHHcccChhhCcCHHHHH
Confidence            44556666778999999999999999999999876


No 301
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00  E-value=9.4e-39  Score=333.33  Aligned_cols=243  Identities=25%  Similarity=0.373  Sum_probs=195.4

Q ss_pred             eEEcccCceEEEEEEEc--CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHV--PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~--~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||.||+|...  .++..+|+|.+..... ......+.+|+.+++.++||||+++++++.+...+|+||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL   79 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence            46899999999999864  4567899998865432 23345688899999999999999999999998999999999999


Q ss_pred             CChHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC---Cc
Q psy2648         130 GEVFDYLVLHG-----RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN---KL  201 (708)
Q Consensus       130 g~L~~~i~~~~-----~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~---~~  201 (708)
                      |+|.+++....     ..++..++.++.||+.||+|||+++++||||||+|||++.++.+||+|||+++......   ..
T Consensus        80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~  159 (269)
T cd05087          80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP  159 (269)
T ss_pred             CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence            99999987532     35667788999999999999999999999999999999999999999999986543221   12


Q ss_pred             cccccCCcccccccccCCcc------CCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCC--C---CCC
Q psy2648         202 DTFCGSPPYAAPELFQGKKY------DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRI--P---FYM  268 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~------~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~--p---~~~  268 (708)
                      ...+|++.|+|||++.+...      .+.++|||||||++|+|++ |..||...+..+.......+ ...+  |   ...
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (269)
T cd05087         160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPL  239 (269)
T ss_pred             CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCC
Confidence            23567889999999864321      2468999999999999996 99999877666554433322 2222  2   245


Q ss_pred             CHHHHHHHHHhhhhCCCCCCCHHHHhhh
Q psy2648         269 STDCENLLKKFLVLNPAKRASLEVSGEV  296 (708)
Q Consensus       269 s~~~~~Li~~~L~~dP~~Rps~~~~~~~  296 (708)
                      ++.+.++|++|+ .||++|||++++.+.
T Consensus       240 ~~~~~~l~~~c~-~~P~~Rpt~~~l~~~  266 (269)
T cd05087         240 SDRWYEVMQFCW-LQPEQRPSAEEVHLL  266 (269)
T ss_pred             ChHHHHHHHHHh-cCcccCCCHHHHHHH
Confidence            788999999998 689999999998754


No 302
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00  E-value=1.5e-38  Score=333.45  Aligned_cols=245  Identities=29%  Similarity=0.502  Sum_probs=212.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      -|++++.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+++.++||||+++++.+..+..+|+||||
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   83 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY   83 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence            37889999999999999999999999999999865432 23445688999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccccc
Q psy2648         127 ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFC  205 (708)
Q Consensus       127 ~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~~~  205 (708)
                      +++++|.+++. .+.+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++....... ......
T Consensus        84 ~~~~~l~~~i~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~  162 (277)
T cd06641          84 LGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV  162 (277)
T ss_pred             CCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhcccc
Confidence            99999999875 4578999999999999999999999999999999999999999999999999987654321 223457


Q ss_pred             cCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHhhhhCC
Q psy2648         206 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCENLLKKFLVLNP  284 (708)
Q Consensus       206 Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~-~~p~~~s~~~~~Li~~~L~~dP  284 (708)
                      |+..|+|||.+.+..++ .++|+|||||++|+|++|..||...+.......+..+.. .++...+.++.++|.+||..||
T Consensus       163 ~~~~y~~PE~~~~~~~~-~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  241 (277)
T cd06641         163 GTPFWMAPEVIKQSAYD-SKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEP  241 (277)
T ss_pred             CCccccChhhhccCCCC-chhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCCh
Confidence            88899999999876654 789999999999999999999988777666666655433 3556678999999999999999


Q ss_pred             CCCCCHHHHh
Q psy2648         285 AKRASLEVSG  294 (708)
Q Consensus       285 ~~Rps~~~~~  294 (708)
                      .+||+++++.
T Consensus       242 ~~Rp~~~~~l  251 (277)
T cd06641         242 SFRPTAKELL  251 (277)
T ss_pred             hhCcCHHHHH
Confidence            9999999887


No 303
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00  E-value=4.1e-39  Score=349.40  Aligned_cols=249  Identities=26%  Similarity=0.441  Sum_probs=204.6

Q ss_pred             cCCeEEEeEEcccCceEEEEEEE-----cCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeC-
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKH-----VPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIETE-  117 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~-----~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~-  117 (708)
                      -++|++.+.||+|+||.||+|.+     ..+++.||||+++.... ......+.+|+.+|..+ +|||||++++++... 
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   84 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC-hHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence            45899999999999999999985     35678999999975432 33456788999999999 689999999987654 


Q ss_pred             CEEEEEEeccCCCChHHHHHHcC---------------------------------------------------------
Q psy2648         118 KTLYLVMEYASGGEVFDYLVLHG---------------------------------------------------------  140 (708)
Q Consensus       118 ~~~ylVmEy~~gg~L~~~i~~~~---------------------------------------------------------  140 (708)
                      ..+|+|||||++|+|.+++....                                                         
T Consensus        85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (343)
T cd05103          85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  164 (343)
T ss_pred             CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence            56899999999999999986531                                                         


Q ss_pred             ----------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC---ccccccC
Q psy2648         141 ----------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGS  207 (708)
Q Consensus       141 ----------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~---~~~~~Gt  207 (708)
                                .++...+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||++........   .....++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  244 (343)
T cd05103         165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP  244 (343)
T ss_pred             hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCC
Confidence                      357778889999999999999999999999999999999999999999999876532211   1223456


Q ss_pred             CcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCH-HHHHHHHHcC-CCCCCCCCCHHHHHHHHHhhhhCC
Q psy2648         208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTL-RELRERVLRG-KYRIPFYMSTDCENLLKKFLVLNP  284 (708)
Q Consensus       208 ~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~-~~l~~~i~~~-~~~~p~~~s~~~~~Li~~~L~~dP  284 (708)
                      +.|+|||++.+..++ .++|||||||++|+|++ |..||.+... .++...+..+ ....|...++++.+++.+||..||
T Consensus       245 ~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p  323 (343)
T cd05103         245 LKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEP  323 (343)
T ss_pred             cceECcHHhcCCCCC-chhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCCh
Confidence            789999999887774 78999999999999997 9999987543 3344444444 334566788999999999999999


Q ss_pred             CCCCCHHHHhh
Q psy2648         285 AKRASLEVSGE  295 (708)
Q Consensus       285 ~~Rps~~~~~~  295 (708)
                      ++||+++++..
T Consensus       324 ~~Rps~~eil~  334 (343)
T cd05103         324 SQRPTFSELVE  334 (343)
T ss_pred             hhCcCHHHHHH
Confidence            99999998874


No 304
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00  E-value=1e-38  Score=346.26  Aligned_cols=251  Identities=26%  Similarity=0.427  Sum_probs=207.9

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC-----
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK-----  118 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-----  118 (708)
                      ..++|++++.||+|+||.||+|.+..+++.||||++.+........+.+.+|+++|+.++||||+++++++....     
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            356899999999999999999999999999999998765433444556889999999999999999999987654     


Q ss_pred             -EEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC
Q psy2648         119 -TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP  197 (708)
Q Consensus       119 -~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~  197 (708)
                       .+|+||||+ +++|.+++. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        93 ~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~  170 (343)
T cd07880          93 HDFYLVMPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS  170 (343)
T ss_pred             ceEEEEEecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence             469999999 678887765 46799999999999999999999999999999999999999999999999999876432


Q ss_pred             CCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC---------------
Q psy2648         198 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---------------  262 (708)
Q Consensus       198 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~---------------  262 (708)
                        ......+++.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+.....               
T Consensus       171 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (343)
T cd07880         171 --EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDA  248 (343)
T ss_pred             --CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhH
Confidence              234457889999999987643345789999999999999999999987765443333322110               


Q ss_pred             ----------------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         263 ----------------RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       263 ----------------~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                                      .+....++++.++|.+||..||.+|||+.++.   |+..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~  303 (343)
T cd07880         249 KNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE  303 (343)
T ss_pred             HHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence                            01124678899999999999999999999887   7653


No 305
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00  E-value=1.3e-38  Score=344.22  Aligned_cols=251  Identities=29%  Similarity=0.497  Sum_probs=203.1

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC-----CE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE-----KT  119 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~  119 (708)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++.... .......+.+|+.+++.++||||+++++++...     ..
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   82 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND   82 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence            368999999999999999999999999999999986432 223445678899999999999999999987654     35


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         120 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      +|+||||+.+ +|.+++. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        83 ~~lv~e~~~~-~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~  160 (336)
T cd07849          83 VYIVQELMET-DLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH  160 (336)
T ss_pred             EEEEehhccc-CHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence            8999999975 8887764 4679999999999999999999999999999999999999999999999999987653221


Q ss_pred             ----CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc---------------C
Q psy2648         200 ----KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR---------------G  260 (708)
Q Consensus       200 ----~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~---------------~  260 (708)
                          .....+|++.|+|||++.+....+.++|||||||++|+|++|+.||.+.+.......+..               .
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (336)
T cd07849         161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISL  240 (336)
T ss_pred             cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhch
Confidence                223467899999999876543335789999999999999999999987654332222110               0


Q ss_pred             -----------CCCCC-----CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         261 -----------KYRIP-----FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       261 -----------~~~~p-----~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                                 ....+     ...++++.+||.+||+.||.+|||++++.   |+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~  297 (336)
T cd07849         241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ  297 (336)
T ss_pred             hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccc
Confidence                       00011     23578899999999999999999999987   6653


No 306
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00  E-value=1.9e-38  Score=338.07  Aligned_cols=244  Identities=30%  Similarity=0.451  Sum_probs=207.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ..|++.+.||+|+||.||+|.+..+++.||||++..... .....+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            469999999999999999999999999999999875432 3344567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccc
Q psy2648         125 EYASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT  203 (708)
Q Consensus       125 Ey~~gg~L~~~i~~-~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~  203 (708)
                      ||+. |+|.+++.. ...+++.++..++.||+.||.|||+++|+||||+|+||+++.++.+||+|||++......   ..
T Consensus        95 e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~---~~  170 (307)
T cd06607          95 EYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA---NS  170 (307)
T ss_pred             HhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC---CC
Confidence            9997 577777654 457899999999999999999999999999999999999999999999999998754332   34


Q ss_pred             cccCCcccccccccC---CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-CCC-CCCCCHHHHHHHHH
Q psy2648         204 FCGSPPYAAPELFQG---KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK-YRI-PFYMSTDCENLLKK  278 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~---~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~-~~~-p~~~s~~~~~Li~~  278 (708)
                      ..|++.|+|||++.+   ..+ +.++|||||||++|+|++|..||.+.+.......+.... ... +...+.++.++|.+
T Consensus       171 ~~~~~~y~aPE~~~~~~~~~~-~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  249 (307)
T cd06607         171 FVGTPYWMAPEVILAMDEGQY-DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDS  249 (307)
T ss_pred             ccCCccccCceeeeccCCCCC-CcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHH
Confidence            578899999999852   334 478999999999999999999999887766555554432 222 23467889999999


Q ss_pred             hhhhCCCCCCCHHHHh
Q psy2648         279 FLVLNPAKRASLEVSG  294 (708)
Q Consensus       279 ~L~~dP~~Rps~~~~~  294 (708)
                      ||..||++||++.++.
T Consensus       250 ~l~~~p~~Rp~~~~il  265 (307)
T cd06607         250 CLQKIPQDRPSSEELL  265 (307)
T ss_pred             HhcCChhhCcCHHHHh
Confidence            9999999999999886


No 307
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00  E-value=1.9e-38  Score=329.41  Aligned_cols=247  Identities=26%  Similarity=0.432  Sum_probs=208.9

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYL  122 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~yl  122 (708)
                      ...++|++.+.||+|+||.||++.+. .+..||+|.+....   ...+.+.+|+++++.++|+||+++++++.. ..+|+
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~   77 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYI   77 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh---hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEE
Confidence            44578999999999999999999854 45679999886532   234568899999999999999999999887 77899


Q ss_pred             EEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q psy2648         123 VMEYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK  200 (708)
Q Consensus       123 VmEy~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~  200 (708)
                      +|||+++++|.+++...  ..+++..++.++.||+.||.|||+.|++||||||+||+++.++.+||+|||++..+.....
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  157 (260)
T cd05073          78 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY  157 (260)
T ss_pred             EEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence            99999999999999764  3578888999999999999999999999999999999999999999999999876543221


Q ss_pred             c--cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHH
Q psy2648         201 L--DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLL  276 (708)
Q Consensus       201 ~--~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li  276 (708)
                      .  ....++..|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+...+...+..+. ...+...+.++.+++
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  236 (260)
T cd05073         158 TAREGAKFPIKWTAPEAINFGSF-TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIM  236 (260)
T ss_pred             ccccCCcccccccCHhHhccCCc-CccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHH
Confidence            1  12335567999999987765 478999999999999998 999999988888777776652 234556788999999


Q ss_pred             HHhhhhCCCCCCCHHHHhh
Q psy2648         277 KKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       277 ~~~L~~dP~~Rps~~~~~~  295 (708)
                      .+||..||++||+++++..
T Consensus       237 ~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         237 MRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             HHHcccCcccCcCHHHHHH
Confidence            9999999999999987763


No 308
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00  E-value=9.7e-39  Score=334.58  Aligned_cols=246  Identities=32%  Similarity=0.539  Sum_probs=207.0

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--CEEEEEEe
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE--KTLYLVME  125 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~ylVmE  125 (708)
                      |++.+.||+|+||.||+|.+..+++.||||++..........+.+.+|+++++.++||||+++++++...  +..|+|||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            7899999999999999999999999999999987643334455688999999999999999999999988  89999999


Q ss_pred             ccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC--Ccc
Q psy2648         126 YASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--KLD  202 (708)
Q Consensus       126 y~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~--~~~  202 (708)
                      |+++ +|.+++... ..+++.+++.++.||+.||+|||++|++|+||||+|||+++++.+||+|||++.......  ...
T Consensus        81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (287)
T cd07840          81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYT  159 (287)
T ss_pred             cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCccccc
Confidence            9975 898888765 579999999999999999999999999999999999999999999999999987654332  123


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-----C--------------
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-----R--------------  263 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~-----~--------------  263 (708)
                      ...++..|+|||.+.+....++++|||||||++|+|++|..||...+.......+....-     .              
T Consensus       160 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd07840         160 NRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLK  239 (287)
T ss_pred             ccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhcc
Confidence            346788899999887654345899999999999999999999998776655554432100     0              


Q ss_pred             ------------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         264 ------------IPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       264 ------------~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                  +...+++++.++|++||..||.+||+++++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l  282 (287)
T cd07840         240 PKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQAL  282 (287)
T ss_pred             ccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence                        0011378899999999999999999999876


No 309
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00  E-value=3.9e-39  Score=346.50  Aligned_cols=251  Identities=27%  Similarity=0.462  Sum_probs=214.5

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC-----EEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK-----TLY  121 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-----~~y  121 (708)
                      +|++.+.||+|+||.||+|++..+++.||||++.+........+.+.+|+.+++.++||||+++++++....     .+|
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            699999999999999999999999999999999765433455667889999999999999999999988775     799


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC--
Q psy2648         122 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--  199 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~--  199 (708)
                      +||||++ ++|.+++.....+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.......  
T Consensus        81 lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~  159 (330)
T cd07834          81 IVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE  159 (330)
T ss_pred             EEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence            9999998 4899998877789999999999999999999999999999999999999999999999999998665432  


Q ss_pred             --CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC--------------
Q psy2648         200 --KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR--------------  263 (708)
Q Consensus       200 --~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~--------------  263 (708)
                        ......+++.|+|||++.+....+.++|||||||++|+|++|..||.+.+..+....+....-.              
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  239 (330)
T cd07834         160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKA  239 (330)
T ss_pred             cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccch
Confidence              2345678999999999988733357899999999999999999999988876655555431100              


Q ss_pred             -----------------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         264 -----------------IPFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       264 -----------------~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                                       .....++++.+||.+||+.||.+||++++++   |+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~  294 (330)
T cd07834         240 RNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ  294 (330)
T ss_pred             hhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence                             0123578899999999999999999999987   7753


No 310
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00  E-value=5.9e-39  Score=340.96  Aligned_cols=245  Identities=27%  Similarity=0.513  Sum_probs=210.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      .-|.....||+|+||.||+|.+..+++.||||++.....  ...+.+.+|+.+++.++||||+++++.+..++.+|+|||
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e   98 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLME   98 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEe
Confidence            346667789999999999999999999999999875432  234567899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCcccc
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~~~  204 (708)
                      |+++++|.+++. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+... ......
T Consensus        99 ~~~~~~L~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~  177 (297)
T cd06659          99 FLQGGALTDIVS-QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL  177 (297)
T ss_pred             cCCCCCHHHHHh-hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccce
Confidence            999999998764 467899999999999999999999999999999999999999999999999998755332 223456


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCHHHHHHHHHhhh
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR---IPFYMSTDCENLLKKFLV  281 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~---~p~~~s~~~~~Li~~~L~  281 (708)
                      +|++.|+|||++.+..++ .++|||||||++|+|++|..||...+..+....+......   .+...+.++.++|.+||+
T Consensus       178 ~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~  256 (297)
T cd06659         178 VGTPYWMAPEVISRTPYG-TEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLT  256 (297)
T ss_pred             ecCccccCHHHHccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhc
Confidence            799999999999887764 7899999999999999999999887766666666544322   234567899999999999


Q ss_pred             hCCCCCCCHHHHh
Q psy2648         282 LNPAKRASLEVSG  294 (708)
Q Consensus       282 ~dP~~Rps~~~~~  294 (708)
                      .||.+||+++++.
T Consensus       257 ~~P~~Rps~~~ll  269 (297)
T cd06659         257 REPQERATAQELL  269 (297)
T ss_pred             CCcccCcCHHHHh
Confidence            9999999999887


No 311
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00  E-value=2.2e-38  Score=330.15  Aligned_cols=245  Identities=28%  Similarity=0.424  Sum_probs=202.8

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYA  127 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~  127 (708)
                      ......||+|+||.||+|.+..++..||+|.+....  ....+.+.+|+.+++.++||||+++++++..++.+|+||||+
T Consensus        10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   87 (268)
T cd06624          10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQV   87 (268)
T ss_pred             CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecC
Confidence            334468999999999999999999999999987543  334567889999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHc-CCC--CHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcC-CCcEEEEeccCccccCCCC-Ccc
Q psy2648         128 SGGEVFDYLVLH-GRM--KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS-EMNIKIADFGFSNEFTPGN-KLD  202 (708)
Q Consensus       128 ~gg~L~~~i~~~-~~l--~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~-~~~iKL~DFGls~~~~~~~-~~~  202 (708)
                      ++++|.+++... ..+  ++..+..++.||+.||+|||++||+||||||+||+++. ++.+||+|||++....... ...
T Consensus        88 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~  167 (268)
T cd06624          88 PGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTE  167 (268)
T ss_pred             CCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccc
Confidence            999999999765 455  88889999999999999999999999999999999986 6789999999987553222 223


Q ss_pred             ccccCCcccccccccCCc-cCCCchhHHHHHHHHHHHHcCCCCCCCCCHH--HHHHH-HHcCCCCCCCCCCHHHHHHHHH
Q psy2648         203 TFCGSPPYAAPELFQGKK-YDGPEVDVWSLGVILYTLVSGSLPFDGSTLR--ELRER-VLRGKYRIPFYMSTDCENLLKK  278 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~-~~~~~~DIWSlGvilyelltG~~Pf~~~~~~--~l~~~-i~~~~~~~p~~~s~~~~~Li~~  278 (708)
                      ...|++.|+|||++.+.. ..+.++|||||||++|+|++|..||......  ..... .......+|...++++.+||++
T Consensus       168 ~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  247 (268)
T cd06624         168 TFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILR  247 (268)
T ss_pred             cCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHH
Confidence            456889999999986543 1247899999999999999999999764322  11111 1223345677788999999999


Q ss_pred             hhhhCCCCCCCHHHHh
Q psy2648         279 FLVLNPAKRASLEVSG  294 (708)
Q Consensus       279 ~L~~dP~~Rps~~~~~  294 (708)
                      ||..+|.+|||++++.
T Consensus       248 ~l~~~p~~Rpt~~~ll  263 (268)
T cd06624         248 CFEPDPDKRASAHDLL  263 (268)
T ss_pred             HcCCCchhCCCHHHHH
Confidence            9999999999999876


No 312
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=100.00  E-value=8.8e-39  Score=340.57  Aligned_cols=247  Identities=30%  Similarity=0.481  Sum_probs=199.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcC--CCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--CEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVP--TGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE--KTLY  121 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~--tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~y  121 (708)
                      +|++.+.||+|+||.||+|.+..  +++.||||++..... .....+.+.+|+.+++.++||||+++++++.+.  ..+|
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            58999999999999999999988  899999999987432 123345678899999999999999999999988  8899


Q ss_pred             EEEeccCCCChHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcC----CCcEEEEeccCc
Q psy2648         122 LVMEYASGGEVFDYLVLH-----GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS----EMNIKIADFGFS  192 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~-----~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~----~~~iKL~DFGls  192 (708)
                      +||||+++ +|.+++...     ..+++..++.++.||+.||+|||+++|+||||||+|||++.    ++.+||+|||++
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~  159 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA  159 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence            99999975 677766432     26899999999999999999999999999999999999999    899999999998


Q ss_pred             cccCCCC----CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHH---------HHHHHH-
Q psy2648         193 NEFTPGN----KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRE---------LRERVL-  258 (708)
Q Consensus       193 ~~~~~~~----~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~---------l~~~i~-  258 (708)
                      .......    .....++++.|+|||++.+....+.++|||||||++|+|++|+.||.+.....         ....+. 
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (316)
T cd07842         160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE  239 (316)
T ss_pred             cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence            7653221    22346789999999998765433578999999999999999999998654321         000000 


Q ss_pred             -------------------------cCCCCCC-----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         259 -------------------------RGKYRIP-----------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       259 -------------------------~~~~~~p-----------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                               .....++           ...+.++.++|.+||+.||++|||++++.
T Consensus       240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil  311 (316)
T cd07842         240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEAL  311 (316)
T ss_pred             HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence                                     0000111           14567899999999999999999999876


No 313
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00  E-value=7.9e-39  Score=344.64  Aligned_cols=247  Identities=25%  Similarity=0.384  Sum_probs=201.0

Q ss_pred             eEEccc--CceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKG--NFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G--~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      ..||+|  +||.||+|++..+|+.||||++.......+..+.+.+|+.+++.++||||++++++++.+..+|+||||+.+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            456666  999999999999999999999987655555667788999999999999999999999999999999999999


Q ss_pred             CChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC-CCC------
Q psy2648         130 GEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNK------  200 (708)
Q Consensus       130 g~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~-~~~------  200 (708)
                      ++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+|++||+.+..... +..      
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (328)
T cd08226          84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYD  163 (328)
T ss_pred             CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccc
Confidence            9999998764  3589999999999999999999999999999999999999999999999986432211 111      


Q ss_pred             -ccccccCCcccccccccCCcc-CCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC--------------
Q psy2648         201 -LDTFCGSPPYAAPELFQGKKY-DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI--------------  264 (708)
Q Consensus       201 -~~~~~Gt~~Y~APE~l~~~~~-~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~--------------  264 (708)
                       .....++..|+|||++.+..+ .+.++|||||||++|+|++|..||.+....+....+..+....              
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (328)
T cd08226         164 FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRM  243 (328)
T ss_pred             ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhh
Confidence             111235677999999976432 2478999999999999999999998876554443333322111              


Q ss_pred             ---------------------------------CCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         265 ---------------------------------PFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       265 ---------------------------------p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                                                       +...++++.+||++||+.||++|||+++++   |+..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~  313 (328)
T cd08226         244 KNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ  313 (328)
T ss_pred             ccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence                                             122456789999999999999999999987   7653


No 314
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00  E-value=1.2e-38  Score=335.58  Aligned_cols=246  Identities=28%  Similarity=0.453  Sum_probs=202.3

Q ss_pred             CeEEEeEEcccCceEEEEEEE----cCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--CEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKH----VPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE--KTL  120 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~----~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~  120 (708)
                      .|++++.||+|+||.||+|+.    ..+++.||+|.+.... .......+.+|+++++.++||||+++++++...  ..+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            478999999999999999984    4678899999986543 234456788999999999999999999998875  578


Q ss_pred             EEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         121 YLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      |+||||++|++|.+++.... .+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~  163 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK  163 (284)
T ss_pred             EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCc
Confidence            99999999999999987653 58999999999999999999999999999999999999999999999999987654322


Q ss_pred             C----ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCC---------------CHHHHHHHHHcC
Q psy2648         200 K----LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS---------------TLRELRERVLRG  260 (708)
Q Consensus       200 ~----~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~---------------~~~~l~~~i~~~  260 (708)
                      .    .....++..|+|||++.+..++ +++|||||||++|+|+++..|+...               ........+..+
T Consensus       164 ~~~~~~~~~~~~~~y~apE~~~~~~~~-~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd05079         164 EYYTVKDDLDSPVFWYAPECLIQSKFY-IASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG  242 (284)
T ss_pred             cceeecCCCCCCccccCHHHhccCCCC-ccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC
Confidence            1    2345677789999999877664 7899999999999999987765321               111222222223


Q ss_pred             C-CCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         261 K-YRIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       261 ~-~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      . ...+...+.++.+||.+||+.||++||+++++.
T Consensus       243 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il  277 (284)
T cd05079         243 KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLI  277 (284)
T ss_pred             ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHH
Confidence            2 234566789999999999999999999999876


No 315
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00  E-value=6.4e-39  Score=339.72  Aligned_cols=251  Identities=29%  Similarity=0.506  Sum_probs=206.2

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC----
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK----  118 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----  118 (708)
                      ..+++|++.+.||+|+||.||+|.+..+++.||||+++...........+.+|+++++.++||||+++++++.+..    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            4567899999999999999999999999999999999765433333456778999999999999999999987654    


Q ss_pred             ------EEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccC
Q psy2648         119 ------TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF  191 (708)
Q Consensus       119 ------~~ylVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGl  191 (708)
                            .+|+||||+++ +|.+++... ..+++.+++.++.||+.||.|||++||+||||||+||++++++.+||+|||+
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~  162 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGL  162 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccc
Confidence                  79999999986 777777654 4689999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCC--CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC---CCC---
Q psy2648         192 SNEFTPGN--KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG---KYR---  263 (708)
Q Consensus       192 s~~~~~~~--~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~---~~~---  263 (708)
                      +.......  ......+++.|+|||++.+....+.++|||||||++|+|++|+.||...+..+....+...   ...   
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (302)
T cd07864         163 ARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVW  242 (302)
T ss_pred             cccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence            87654332  1122356788999999876544457899999999999999999999877655444333321   100   


Q ss_pred             ------------------------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         264 ------------------------IPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       264 ------------------------~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                              ....++..+.+||.+||..||.+||+++++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il  297 (302)
T cd07864         243 PDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEAL  297 (302)
T ss_pred             ccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence                                    0113578999999999999999999999876


No 316
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=100.00  E-value=6.1e-39  Score=340.74  Aligned_cols=250  Identities=26%  Similarity=0.467  Sum_probs=202.8

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC------
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE------  117 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------  117 (708)
                      .+++|++.+.||+|+||.||+|.+..+++.||||++............+.+|+++++.++||||+++++++...      
T Consensus         6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   85 (311)
T cd07866           6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR   85 (311)
T ss_pred             ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence            37899999999999999999999999999999999876543333334567899999999999999999987543      


Q ss_pred             --CEEEEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccc
Q psy2648         118 --KTLYLVMEYASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE  194 (708)
Q Consensus       118 --~~~ylVmEy~~gg~L~~~i~~-~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~  194 (708)
                        ..+|+||||+.+ +|...+.. ...+++.+++.++.||+.||+|||++||+||||||+|||+++++.+||+|||++..
T Consensus        86 ~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~  164 (311)
T cd07866          86 KRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARP  164 (311)
T ss_pred             cCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchh
Confidence              357999999975 67776654 35799999999999999999999999999999999999999999999999999875


Q ss_pred             cCCCCC------------ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC
Q psy2648         195 FTPGNK------------LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY  262 (708)
Q Consensus       195 ~~~~~~------------~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~  262 (708)
                      ......            .....|++.|+|||++.+....+.++|||||||++|+|++|+.||.+.+.....+.+....-
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~  244 (311)
T cd07866         165 YDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCG  244 (311)
T ss_pred             ccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence            432211            12345788899999987654335789999999999999999999998877655554432100


Q ss_pred             -----------------------CCC-------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         263 -----------------------RIP-------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       263 -----------------------~~p-------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                             ..|       ...++++.++|.+||..||.+|||++++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell  306 (311)
T cd07866         245 TPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDAL  306 (311)
T ss_pred             CCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHh
Confidence                                   000       12346789999999999999999998876


No 317
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00  E-value=1.4e-38  Score=331.84  Aligned_cols=243  Identities=23%  Similarity=0.405  Sum_probs=193.8

Q ss_pred             eEEcccCceEEEEEEEcC--CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFAKVKLAKHVP--TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~--tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.||+|+||+||+|....  ....||+|.+.... .......+.+|+.+++.++||||+++++.+.+...+|+||||+++
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL   79 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence            368999999999997543  44578888875432 233445678999999999999999999999999999999999999


Q ss_pred             CChHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC---c
Q psy2648         130 GEVFDYLVLHG-----RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---L  201 (708)
Q Consensus       130 g~L~~~i~~~~-----~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~---~  201 (708)
                      |+|.+++....     ..++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++........   .
T Consensus        80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~  159 (269)
T cd05042          80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK  159 (269)
T ss_pred             CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence            99999997643     246778899999999999999999999999999999999999999999999865432211   1


Q ss_pred             cccccCCcccccccccCC------ccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH-cCCCCC-----CCCC
Q psy2648         202 DTFCGSPPYAAPELFQGK------KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVL-RGKYRI-----PFYM  268 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~------~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~-~~~~~~-----p~~~  268 (708)
                      ....+++.|+|||++...      ...+.++|||||||++|+|++ |..||......+....+. .+...+     +...
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (269)
T cd05042         160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKY  239 (269)
T ss_pred             CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccC
Confidence            223456789999997532      122478999999999999999 899998877665554443 333332     3356


Q ss_pred             CHHHHHHHHHhhhhCCCCCCCHHHHhhh
Q psy2648         269 STDCENLLKKFLVLNPAKRASLEVSGEV  296 (708)
Q Consensus       269 s~~~~~Li~~~L~~dP~~Rps~~~~~~~  296 (708)
                      ++.+.+++..|+ .||++|||++++..+
T Consensus       240 ~~~~~~~~~~~~-~dp~~Rpt~~~v~~~  266 (269)
T cd05042         240 SDRWYEVMQFCW-LDPETRPTAEEVHEL  266 (269)
T ss_pred             CHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence            788899999998 599999999988754


No 318
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00  E-value=2.5e-38  Score=333.81  Aligned_cols=244  Identities=30%  Similarity=0.518  Sum_probs=211.1

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      .|...+.||+|+||.||++.+..+++.||||++....  ....+.+.+|+.+++.++||||+++++++...+..|+|+||
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~   97 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF   97 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence            3555679999999999999999999999999986432  23345688999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccccc
Q psy2648         127 ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFC  205 (708)
Q Consensus       127 ~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~~~  205 (708)
                      +++++|.+++.. +++++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++....... ......
T Consensus        98 ~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~  176 (285)
T cd06648          98 LEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLV  176 (285)
T ss_pred             cCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccccccc
Confidence            999999998876 689999999999999999999999999999999999999999999999999876543221 223457


Q ss_pred             cCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCHHHHHHHHHhhhh
Q psy2648         206 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI---PFYMSTDCENLLKKFLVL  282 (708)
Q Consensus       206 Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~---p~~~s~~~~~Li~~~L~~  282 (708)
                      |++.|+|||++.+..++ .++|||||||++|+|++|..||...+..+....+..+....   +...+.++.+||.+||..
T Consensus       177 ~~~~y~aPE~~~~~~~~-~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  255 (285)
T cd06648         177 GTPYWMAPEVISRLPYG-TEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVR  255 (285)
T ss_pred             CCccccCHHHhcCCCCC-CcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHccc
Confidence            89999999999887764 78999999999999999999999888777777776653322   233678999999999999


Q ss_pred             CCCCCCCHHHHh
Q psy2648         283 NPAKRASLEVSG  294 (708)
Q Consensus       283 dP~~Rps~~~~~  294 (708)
                      ||++||+++++.
T Consensus       256 ~p~~Rpt~~~il  267 (285)
T cd06648         256 DPAQRATAAELL  267 (285)
T ss_pred             ChhhCcCHHHHc
Confidence            999999999877


No 319
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=100.00  E-value=3.8e-38  Score=332.38  Aligned_cols=246  Identities=30%  Similarity=0.457  Sum_probs=206.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--CEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE--KTLYLV  123 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~ylV  123 (708)
                      ++|+..+.||.|+||.||+|.+..+++.||+|++..... ......+.+|+++++.++||||+++++++...  ..+|+|
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   79 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA   79 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence            479999999999999999999999999999999975432 24456788999999999999999999988653  478999


Q ss_pred             EeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         124 MEYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       124 mEy~~gg~L~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      |||+++++|.+++..    ...+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.+||+|||++.......
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  159 (287)
T cd06621          80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL  159 (287)
T ss_pred             EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc
Confidence            999999999887653    3458999999999999999999999999999999999999999999999999987543322


Q ss_pred             CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHHcCCC-CCC------CC
Q psy2648         200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS-----TLRELRERVLRGKY-RIP------FY  267 (708)
Q Consensus       200 ~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~-----~~~~l~~~i~~~~~-~~p------~~  267 (708)
                       .....++..|+|||.+.+..++ .++|||||||++|+|++|..||...     ...++...+..... .++      ..
T Consensus       160 -~~~~~~~~~y~~pE~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T cd06621         160 -AGTFTGTSFYMAPERIQGKPYS-ITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIK  237 (287)
T ss_pred             -cccccCCccccCHHHhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCc
Confidence             2345688899999999887775 7899999999999999999999865     33455555544221 111      12


Q ss_pred             CCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         268 MSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       268 ~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .++++.+||.+||..||.+|||+.++.
T Consensus       238 ~~~~~~~li~~~l~~~p~~Rpt~~eil  264 (287)
T cd06621         238 WSEEFKDFIKQCLEKDPTRRPTPWDML  264 (287)
T ss_pred             hHHHHHHHHHHHcCCCcccCCCHHHHH
Confidence            357899999999999999999999887


No 320
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00  E-value=2e-38  Score=372.37  Aligned_cols=151  Identities=34%  Similarity=0.606  Sum_probs=140.2

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEE
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~y  121 (708)
                      |.+++|++++.||+|+||.||+|.+..+++.||||++.+... .......+.+|+.+++.++||||+++++++.....+|
T Consensus         1 p~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~   80 (669)
T cd05610           1 PSIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVY   80 (669)
T ss_pred             CccCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEE
Confidence            357899999999999999999999999999999999976543 3444567889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcc
Q psy2648         122 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN  193 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~  193 (708)
                      |||||+.|++|.+++...+.+++..++.++.||+.||+|||+++||||||||+||||+.++.+||+|||+++
T Consensus        81 lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          81 LVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            999999999999999888889999999999999999999999999999999999999999999999999875


No 321
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00  E-value=2e-38  Score=330.82  Aligned_cols=246  Identities=27%  Similarity=0.448  Sum_probs=208.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCC---CcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPT---GKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYL  122 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~t---g~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~yl  122 (708)
                      .+|.+.+.||+|+||.||+|.+...   ...||||...... .....+.+.+|+.+++.++||||+++++++++ ...|+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l   83 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI   83 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence            4689999999999999999987654   3569999886432 23455678899999999999999999999876 45789


Q ss_pred             EEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCc
Q psy2648         123 VMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL  201 (708)
Q Consensus       123 VmEy~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~  201 (708)
                      ||||+++|+|.+++.... .+++..++.++.||+.||+|||+++++||||||+|||++.++.+||+|||+++........
T Consensus        84 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~  163 (270)
T cd05056          84 VMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYY  163 (270)
T ss_pred             EEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccce
Confidence            999999999999997654 5899999999999999999999999999999999999999999999999998765433211


Q ss_pred             --cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHH
Q psy2648         202 --DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLLK  277 (708)
Q Consensus       202 --~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~  277 (708)
                        ....+++.|+|||.+.+..++ .++|||||||++|+|++ |..||.+.+..+....+..+. ...|...+.++.++|.
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (270)
T cd05056         164 KASKGKLPIKWMAPESINFRRFT-SASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT  242 (270)
T ss_pred             ecCCCCccccccChhhhccCCCC-chhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHH
Confidence              122345679999998877664 78999999999999996 999999888777777777664 3456778899999999


Q ss_pred             HhhhhCCCCCCCHHHHh
Q psy2648         278 KFLVLNPAKRASLEVSG  294 (708)
Q Consensus       278 ~~L~~dP~~Rps~~~~~  294 (708)
                      +||..+|.+|||+.++.
T Consensus       243 ~~l~~~P~~Rpt~~~~~  259 (270)
T cd05056         243 KCWAYDPSKRPRFTELK  259 (270)
T ss_pred             HHcCCChhhCcCHHHHH
Confidence            99999999999998876


No 322
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00  E-value=9.1e-39  Score=330.06  Aligned_cols=234  Identities=22%  Similarity=0.336  Sum_probs=195.4

Q ss_pred             eEEcccCceEEEEEEEcCCC----------cEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEE
Q psy2648          52 KTIGKGNFAKVKLAKHVPTG----------KEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg----------~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~y  121 (708)
                      +.||+|+||.||+|.+..++          ..|++|++.....   ....+.+|+.+|+.++||||+++++++.. ...|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~   76 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENI   76 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh---hHHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence            46899999999999998777          3588887754321   15678899999999999999999999887 7789


Q ss_pred             EEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCC-------cEEEEeccCcc
Q psy2648         122 LVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM-------NIKIADFGFSN  193 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~-------~iKL~DFGls~  193 (708)
                      +||||+++|+|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++       .+||+|||++.
T Consensus        77 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~  156 (259)
T cd05037          77 MVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI  156 (259)
T ss_pred             EEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence            9999999999999998766 789999999999999999999999999999999999999888       79999999987


Q ss_pred             ccCCCCCccccccCCcccccccccCC--ccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCH
Q psy2648         194 EFTPGNKLDTFCGSPPYAAPELFQGK--KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYMST  270 (708)
Q Consensus       194 ~~~~~~~~~~~~Gt~~Y~APE~l~~~--~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~  270 (708)
                      ....   .....++..|+|||++.+.  .+ +.++|||||||++|+|++ |..||...+..+...... .....|.....
T Consensus       157 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~-~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~  231 (259)
T cd05037         157 TVLS---REERVERIPWIAPECIRNGQASL-TIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-DQHRLPMPDCA  231 (259)
T ss_pred             cccc---ccccccCCCccChhhhcCCCCCc-chhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-cCCCCCCCCch
Confidence            6543   2234677889999999876  44 578999999999999999 689998775444333332 22334444458


Q ss_pred             HHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         271 DCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       271 ~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ++.++|.+||..||.+||++.++.
T Consensus       232 ~~~~li~~~l~~~p~~Rpt~~~il  255 (259)
T cd05037         232 ELANLINQCWTYDPTKRPSFRAIL  255 (259)
T ss_pred             HHHHHHHHHhccChhhCCCHHHHH
Confidence            999999999999999999999875


No 323
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00  E-value=1.6e-38  Score=338.34  Aligned_cols=247  Identities=29%  Similarity=0.476  Sum_probs=208.4

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCc----EEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGK----EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~----~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  120 (708)
                      ..+|++.+.||+|+||.||+|.+..+++    .||+|++.... .......+.+|+.+++.++||||+++++++... ..
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~   83 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI   83 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence            3578999999999999999999988886    47888886543 233344678999999999999999999998754 47


Q ss_pred             EEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         121 YLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      ++++||+++|+|.+++..+. .+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++......
T Consensus        84 ~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~  163 (303)
T cd05110          84 QLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE  163 (303)
T ss_pred             eeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcc
Confidence            89999999999999987754 68999999999999999999999999999999999999999999999999998654332


Q ss_pred             C---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHH
Q psy2648         200 K---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCEN  274 (708)
Q Consensus       200 ~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~  274 (708)
                      .   .....++..|+|||++.+..++ .++|||||||++|+|++ |..||.+....++.+.+..+. +..|...+.++.+
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~-~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (303)
T cd05110         164 KEYNADGGKMPIKWMALECIHYRKFT-HQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYM  242 (303)
T ss_pred             cccccCCCccccccCCHHHhccCCCC-hHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHH
Confidence            2   2234457789999999877764 78999999999999997 999999887777766665543 3344567889999


Q ss_pred             HHHHhhhhCCCCCCCHHHHh
Q psy2648         275 LLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +|.+||..||++||+++++.
T Consensus       243 li~~c~~~~p~~Rp~~~~l~  262 (303)
T cd05110         243 VMVKCWMIDADSRPKFKELA  262 (303)
T ss_pred             HHHHHcCCChhhCcCHHHHH
Confidence            99999999999999999876


No 324
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=6.7e-39  Score=365.03  Aligned_cols=250  Identities=23%  Similarity=0.404  Sum_probs=191.1

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCC-cEEEEEEec--------------cC-CCChhhHHHHHHHHHHHHhCCCCC
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTG-KEVAIKIID--------------KT-QLNPGSLQKLFREVRIMKMLDHPN  106 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg-~~vAvK~i~--------------~~-~~~~~~~~~~~~Ei~il~~l~Hpn  106 (708)
                      ..+++|++++.||+|+||+||+|.++... ..+++|.+.              +. .........+.+|+.+|+.++|||
T Consensus       145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence            34678999999999999999999865432 233333111              11 111223445779999999999999


Q ss_pred             eeeEEEEEEeCCEEEEEEeccCCCChHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCC
Q psy2648         107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-----GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE  181 (708)
Q Consensus       107 Iv~l~~~~~~~~~~ylVmEy~~gg~L~~~i~~~-----~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~  181 (708)
                      ||+++++++..+..|+|||++. ++|++++...     ......+++.++.||+.||+|||++|||||||||+||||+.+
T Consensus       225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~  303 (501)
T PHA03210        225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD  303 (501)
T ss_pred             cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence            9999999999999999999995 5788877543     234467788999999999999999999999999999999999


Q ss_pred             CcEEEEeccCccccCCCCC--ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCC-CCCC---CHHHHHH
Q psy2648         182 MNIKIADFGFSNEFTPGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGS---TLRELRE  255 (708)
Q Consensus       182 ~~iKL~DFGls~~~~~~~~--~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~P-f~~~---~~~~l~~  255 (708)
                      +.+||+|||+++.+.....  ....+||+.|+|||++.+..|+ .++|||||||+||||++|.+| |.+.   ...++.+
T Consensus       304 ~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~  382 (501)
T PHA03210        304 GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYC-EITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLK  382 (501)
T ss_pred             CCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCC-cHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHH
Confidence            9999999999987643322  2346899999999999988875 789999999999999998764 4322   1223322


Q ss_pred             HHHcC---------------------CC-----CCC-----CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         256 RVLRG---------------------KY-----RIP-----FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       256 ~i~~~---------------------~~-----~~p-----~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .+..-                     .+     .++     ..++.++.++|.+||..||.+|||+++++
T Consensus       383 ~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL  452 (501)
T PHA03210        383 IIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELL  452 (501)
T ss_pred             HHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHh
Confidence            22110                     00     000     12456788999999999999999999987


No 325
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00  E-value=1.5e-38  Score=344.77  Aligned_cols=250  Identities=27%  Similarity=0.455  Sum_probs=203.2

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC-------
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE-------  117 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-------  117 (708)
                      -++|++.+.||.|+||.||+|.+..+++.||+|++.....  ...+.+.+|+++|+.++||||+++++++...       
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   81 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED   81 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence            3689999999999999999999999999999999875533  3456688999999999999999999876654       


Q ss_pred             -------CEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcC-CCcEEEEec
Q psy2648         118 -------KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS-EMNIKIADF  189 (708)
Q Consensus       118 -------~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~-~~~iKL~DF  189 (708)
                             ..+|+||||++ ++|.+++. .+.+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+||
T Consensus        82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~df  159 (342)
T cd07854          82 VGSLTELNSVYIVQEYME-TDLANVLE-QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDF  159 (342)
T ss_pred             cccccccceEEEEeeccc-ccHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCc
Confidence                   35899999997 58888775 457999999999999999999999999999999999999985 457899999


Q ss_pred             cCccccCCCC----CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC----
Q psy2648         190 GFSNEFTPGN----KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK----  261 (708)
Q Consensus       190 Gls~~~~~~~----~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~----  261 (708)
                      |++.......    ......|+..|+|||++.+....+.++|||||||++|+|++|+.||.+.+..+....+....    
T Consensus       160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  239 (342)
T cd07854         160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR  239 (342)
T ss_pred             ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence            9987543211    11234678899999987654434578999999999999999999998776544433332210    


Q ss_pred             ---------------------CC-----CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         262 ---------------------YR-----IPFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       262 ---------------------~~-----~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                                           ..     ....++.++.+||.+||+.||.+|||+++++   |+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence                                 00     1124678899999999999999999999987   7753


No 326
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00  E-value=1.6e-38  Score=328.56  Aligned_cols=240  Identities=31%  Similarity=0.492  Sum_probs=206.1

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      +.+|++.+.||+|+||.||++.  .+++.||+|++....    ..+.+.+|+.+++.++||||+++++++..+ ..|+||
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~   77 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM   77 (254)
T ss_pred             HHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence            4679999999999999999986  478899999986432    235688999999999999999999998654 579999


Q ss_pred             eccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcc
Q psy2648         125 EYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD  202 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~  202 (708)
                      ||+.+++|.+++....  .+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++......  ..
T Consensus        78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~--~~  155 (254)
T cd05083          78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG--VD  155 (254)
T ss_pred             ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc--CC
Confidence            9999999999997654  4789999999999999999999999999999999999999999999999998754322  22


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHhh
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLLKKFL  280 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~~~L  280 (708)
                      ....+..|+|||.+.+..++ .++|||||||++|+|++ |+.||...+..++...+..+. ...+...+.++.++|.+||
T Consensus       156 ~~~~~~~y~~pe~~~~~~~~-~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  234 (254)
T cd05083         156 NSKLPVKWTAPEALKHKKFS-SKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCW  234 (254)
T ss_pred             CCCCCceecCHHHhccCCcC-chhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHc
Confidence            23445679999999877764 78999999999999997 999999998888888877663 2334567889999999999


Q ss_pred             hhCCCCCCCHHHHh
Q psy2648         281 VLNPAKRASLEVSG  294 (708)
Q Consensus       281 ~~dP~~Rps~~~~~  294 (708)
                      ..+|++||+++++.
T Consensus       235 ~~~p~~Rp~~~~l~  248 (254)
T cd05083         235 ETEPKKRPSFHKLR  248 (254)
T ss_pred             CCChhhCcCHHHHH
Confidence            99999999999876


No 327
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00  E-value=1.2e-38  Score=337.72  Aligned_cols=250  Identities=31%  Similarity=0.515  Sum_probs=212.3

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      .++|++.+.||+|+||.||++....+++.||+|.+.....  ...+.+.+|+.+++.++||||+++++++...+.+|+|+
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~   95 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM   95 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence            4789999999999999999999999999999999864432  23456889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDT  203 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~  203 (708)
                      ||+++++|.+++.. ..+++.++..++.||+.||.|||++|++||||||+||+++.++.+||+|||++....... ....
T Consensus        96 e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~  174 (293)
T cd06647          96 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST  174 (293)
T ss_pred             ecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccccc
Confidence            99999999998864 468899999999999999999999999999999999999999999999999987654332 2334


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-CC--CCCCCCCHHHHHHHHHhh
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-KY--RIPFYMSTDCENLLKKFL  280 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-~~--~~p~~~s~~~~~Li~~~L  280 (708)
                      ..|++.|+|||.+.+..++ .++|||||||++|+|++|..||...+..+....+..+ ..  ..+..++.++.++|.+||
T Consensus       175 ~~~~~~y~~PE~~~~~~~~-~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  253 (293)
T cd06647         175 MVGTPYWMAPEVVTRKAYG-PKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL  253 (293)
T ss_pred             ccCChhhcCchhhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHc
Confidence            5789999999999877664 7899999999999999999999877654433333222 22  223456788999999999


Q ss_pred             hhCCCCCCCHHHHh---hhhh
Q psy2648         281 VLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       281 ~~dP~~Rps~~~~~---~~~~  298 (708)
                      ..||++||+++++.   |+..
T Consensus       254 ~~~p~~Rp~~~~il~h~~~~~  274 (293)
T cd06647         254 EMDVEKRGSAKELLQHPFLKI  274 (293)
T ss_pred             cCChhhCcCHHHHhcCHHHhc
Confidence            99999999999987   6653


No 328
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00  E-value=2.1e-38  Score=328.58  Aligned_cols=241  Identities=24%  Similarity=0.414  Sum_probs=200.8

Q ss_pred             eEEcccCceEEEEEEEcC---CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEE-eCCEEEEEEecc
Q psy2648          52 KTIGKGNFAKVKLAKHVP---TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIE-TEKTLYLVMEYA  127 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~---tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~-~~~~~ylVmEy~  127 (708)
                      +.||+|+||.||+|.+..   ....||||.+.... .....+.+.+|+.+++.++||||+++++++. .+...|+||||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~   79 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM   79 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccC-CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence            468999999999998753   34579999885432 3345567889999999999999999999765 455689999999


Q ss_pred             CCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-----Cc
Q psy2648         128 SGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-----KL  201 (708)
Q Consensus       128 ~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-----~~  201 (708)
                      .+|+|.+++... ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++......     ..
T Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  159 (262)
T cd05058          80 KHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH  159 (262)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence            999999999764 356778888999999999999999999999999999999999999999999987543211     11


Q ss_pred             cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHh
Q psy2648         202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCENLLKKF  279 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~-~~p~~~s~~~~~Li~~~  279 (708)
                      ....+++.|+|||.+.+..++ .++|||||||++|+|++ |.+||...+..++...+..+.. ..|...++.+.+++.+|
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  238 (262)
T cd05058         160 TGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSC  238 (262)
T ss_pred             ccCcCCccccChhHhccCccc-hHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHH
Confidence            233467789999999877764 79999999999999999 6778888888888877776643 34566788999999999


Q ss_pred             hhhCCCCCCCHHHHh
Q psy2648         280 LVLNPAKRASLEVSG  294 (708)
Q Consensus       280 L~~dP~~Rps~~~~~  294 (708)
                      |..||++||++.++.
T Consensus       239 l~~~p~~Rp~~~~il  253 (262)
T cd05058         239 WHPKPEMRPTFSELV  253 (262)
T ss_pred             cCCChhhCCCHHHHH
Confidence            999999999999876


No 329
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=100.00  E-value=4.4e-38  Score=321.54  Aligned_cols=245  Identities=34%  Similarity=0.566  Sum_probs=212.4

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      .|.+.+.||+|+||.||++.+..+++.||+|++.....  ...+.+.+|+++++.++||||+++++++......|+++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~   78 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF   78 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence            48899999999999999999999999999999976543  3456788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccccc
Q psy2648         127 ASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFC  205 (708)
Q Consensus       127 ~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~~  205 (708)
                      +++++|.+++... ..+++.++..++.||+.||.|||++|++||||+|+||+++.++.+||+|||++.............
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  158 (253)
T cd05122          79 CSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV  158 (253)
T ss_pred             CCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccccccee
Confidence            9999999998776 579999999999999999999999999999999999999999999999999987765443245567


Q ss_pred             cCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-CCCCCCC--CCHHHHHHHHHhhhh
Q psy2648         206 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-KYRIPFY--MSTDCENLLKKFLVL  282 (708)
Q Consensus       206 Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-~~~~p~~--~s~~~~~Li~~~L~~  282 (708)
                      |+..|+|||.+.+..+ +.++||||||+++|+|++|..||...+..+....+... ....+..  .+.++.++|.+||..
T Consensus       159 ~~~~~~~PE~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  237 (253)
T cd05122         159 GTPYWMAPEVINGKPY-DYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQK  237 (253)
T ss_pred             cCCcccCHHHHcCCCC-CccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccC
Confidence            8999999999987765 47899999999999999999999887555444444332 2233333  378999999999999


Q ss_pred             CCCCCCCHHHHh
Q psy2648         283 NPAKRASLEVSG  294 (708)
Q Consensus       283 dP~~Rps~~~~~  294 (708)
                      ||++|||+++++
T Consensus       238 ~p~~R~t~~~~l  249 (253)
T cd05122         238 NPEKRPTAEQLL  249 (253)
T ss_pred             ChhhCCCHHHHh
Confidence            999999998875


No 330
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=100.00  E-value=1.3e-38  Score=327.28  Aligned_cols=240  Identities=41%  Similarity=0.735  Sum_probs=215.4

Q ss_pred             EcccCceEEEEEEEcCCCcEEEEEEeccCCCC-hhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCCh
Q psy2648          54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN-PGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEV  132 (708)
Q Consensus        54 LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg~L  132 (708)
                      ||+|+||.||++.+..+++.||+|++.+.... ......+..|+.+++.++||||+++++.++.+..+|+||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            69999999999999999999999999876442 23456788999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCccccccCCccc
Q psy2648         133 FDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTFCGSPPYA  211 (708)
Q Consensus       133 ~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~~~~Gt~~Y~  211 (708)
                      .+++.....+++.++..++.||+.||.|||+.+++|+||||+||+++.++.++|+|||++...... .......++..|+
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~  160 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYL  160 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCcccc
Confidence            999988888999999999999999999999999999999999999999999999999998765433 2344567899999


Q ss_pred             ccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCCCH-
Q psy2648         212 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRASL-  290 (708)
Q Consensus       212 APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rps~-  290 (708)
                      |||.+.+... +.++|+||||+++|+|++|..||...+..++.+.+......+|...+.++.++|++||..||++||++ 
T Consensus       161 ~Pe~~~~~~~-~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~  239 (250)
T cd05123         161 APEVLLGKGY-GKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSG  239 (250)
T ss_pred             ChHHhCCCCC-CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcc
Confidence            9999987765 47899999999999999999999988888888888888888888889999999999999999999999 


Q ss_pred             --HHHh
Q psy2648         291 --EVSG  294 (708)
Q Consensus       291 --~~~~  294 (708)
                        +++.
T Consensus       240 ~~~~l~  245 (250)
T cd05123         240 GAEEIK  245 (250)
T ss_pred             cHHHHH
Confidence              5544


No 331
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00  E-value=2e-38  Score=330.35  Aligned_cols=247  Identities=28%  Similarity=0.540  Sum_probs=212.4

Q ss_pred             CeEEEeEEcccCceEEEEEEEcC-CCcEEEEEEeccCCC--------ChhhHHHHHHHHHHHHh-CCCCCeeeEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVP-TGKEVAIKIIDKTQL--------NPGSLQKLFREVRIMKM-LDHPNIVKLFQVIET  116 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~-tg~~vAvK~i~~~~~--------~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~  116 (708)
                      .|++.+.||+|+||.||+|.+.. +++.||||.+.....        .......+.+|+.++.. ++||||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            48899999999999999999987 788999999864321        22344567789998864 799999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCCEEEcCCCcEEEEeccC
Q psy2648         117 EKTLYLVMEYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLLDSEMNIKIADFGF  191 (708)
Q Consensus       117 ~~~~ylVmEy~~gg~L~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH~-~gIvHRDLKPeNILld~~~~iKL~DFGl  191 (708)
                      .+.+|+||||+++++|.+++..    ...+++..++.++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~  160 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL  160 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence            9999999999999999988743    3468999999999999999999996 7899999999999999999999999999


Q ss_pred             ccccCCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC-CC-CCC
Q psy2648         192 SNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI-PF-YMS  269 (708)
Q Consensus       192 s~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~-p~-~~s  269 (708)
                      +.............|+..|+|||++.+..+ +.++|||||||++|+|++|..||...+.......+..+.+.. +. ..+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (269)
T cd08528         161 AKQKQPESKLTSVVGTILYSCPEIVKNEPY-GEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYS  239 (269)
T ss_pred             eeecccccccccccCcccCcChhhhcCCCC-chHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCC
Confidence            876554444456678999999999988776 579999999999999999999999888887777777665542 22 467


Q ss_pred             HHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         270 TDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       270 ~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +++.++|.+||+.||++||++.++.
T Consensus       240 ~~l~~li~~cl~~~p~~Rp~~~e~~  264 (269)
T cd08528         240 EDVTDVITSCLTPDAEARPDIIQVS  264 (269)
T ss_pred             HHHHHHHHHHCCCCCccCCCHHHHH
Confidence            8999999999999999999998865


No 332
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00  E-value=9.1e-39  Score=332.59  Aligned_cols=242  Identities=26%  Similarity=0.433  Sum_probs=205.0

Q ss_pred             eEEcccCceEEEEEEEcCCC------cEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          52 KTIGKGNFAKVKLAKHVPTG------KEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg------~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      +.||+|+||.||+|++....      +.||||.+.+.. .......+.+|+.+|+.++||||+++++++......|+|||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME   79 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence            36899999999999986544      689999986542 22345678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCC-----cEEEEeccCcc
Q psy2648         126 YASGGEVFDYLVLH-------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM-----NIKIADFGFSN  193 (708)
Q Consensus       126 y~~gg~L~~~i~~~-------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~-----~iKL~DFGls~  193 (708)
                      |+++++|.+++...       ..+++.++..++.||+.||+|||+++++|+||||+|||++.++     .+||+|||++.
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~  159 (269)
T cd05044          80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR  159 (269)
T ss_pred             ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence            99999999999753       2478899999999999999999999999999999999999887     89999999987


Q ss_pred             ccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCC
Q psy2648         194 EFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRG-KYRIPFYM  268 (708)
Q Consensus       194 ~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~-~~~~p~~~  268 (708)
                      .......   .....++..|+|||++.+..+ +.++|||||||++|+|++ |..||...+..++...+..+ .+..+...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  238 (269)
T cd05044         160 DIYKSDYYRKEGEGLLPVRWMAPESLLDGKF-TTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENC  238 (269)
T ss_pred             ccccccccccCcccCCCccccCHHHHccCCc-ccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccc
Confidence            5432211   123345678999999987776 489999999999999998 99999988877777776654 34566778


Q ss_pred             CHHHHHHHHHhhhhCCCCCCCHHHHhh
Q psy2648         269 STDCENLLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       269 s~~~~~Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      +.++.+||.+||..+|.+||+++++..
T Consensus       239 ~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         239 PDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             hHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            899999999999999999999998764


No 333
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00  E-value=1.9e-38  Score=330.98  Aligned_cols=246  Identities=25%  Similarity=0.449  Sum_probs=207.9

Q ss_pred             eEEEeEEcccCceEEEEEEEc---CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC------
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHV---PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK------  118 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~---~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------  118 (708)
                      |.+.+.||+|+||.||+|...   .+++.||||++..........+.+.+|+++|+.++||||+++++++....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            678899999999999999865   36789999999766555556677889999999999999999999886532      


Q ss_pred             EEEEEEeccCCCChHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCc
Q psy2648         119 TLYLVMEYASGGEVFDYLVLH------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS  192 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls  192 (708)
                      ..++++||+.+|+|.+++...      ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~  160 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS  160 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence            247899999999999887532      24788999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCC---ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCC
Q psy2648         193 NEFTPGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFY  267 (708)
Q Consensus       193 ~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~  267 (708)
                      +....+..   .....+++.|++||.+.+..++ .++|||||||++|+|++ |..||.+.+..++...+..+. ...+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  239 (273)
T cd05074         161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYT-THSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPD  239 (273)
T ss_pred             ccccCCcceecCCCccCchhhcCHhHHhcCccc-hhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCC
Confidence            76543221   1233456789999999877664 78999999999999999 999999988888877776653 344556


Q ss_pred             CCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         268 MSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       268 ~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .+.++.+++.+||..+|++||++.++.
T Consensus       240 ~~~~~~~l~~~~l~~~p~~Rps~~~~~  266 (273)
T cd05074         240 CLEDVYELMCQCWSPEPKCRPSFQHLR  266 (273)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            789999999999999999999999876


No 334
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00  E-value=8.2e-39  Score=336.89  Aligned_cols=246  Identities=28%  Similarity=0.438  Sum_probs=201.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      ++|+..+.||+|+||.||++.+..+++.||||.+.+.... .....+.+|+.++.++. ||||+++++++..+...|++|
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~   82 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM   82 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence            4577788999999999999999999999999999765433 44567889999999996 999999999999999999999


Q ss_pred             eccCCCChHH---HHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCCEEEcCCCcEEEEeccCccccCCC
Q psy2648         125 EYASGGEVFD---YLV--LHGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG  198 (708)
Q Consensus       125 Ey~~gg~L~~---~i~--~~~~l~e~~~~~i~~QI~~aL~yLH~~-gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~  198 (708)
                      ||+.. +|.+   ++.  ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus        83 e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  161 (288)
T cd06616          83 ELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS  161 (288)
T ss_pred             ecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence            99874 4443   332  236799999999999999999999974 9999999999999999999999999998765443


Q ss_pred             CCccccccCCcccccccccCC---ccCCCchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHcCCC-CCC----CCCC
Q psy2648         199 NKLDTFCGSPPYAAPELFQGK---KYDGPEVDVWSLGVILYTLVSGSLPFDGSTL-RELRERVLRGKY-RIP----FYMS  269 (708)
Q Consensus       199 ~~~~~~~Gt~~Y~APE~l~~~---~~~~~~~DIWSlGvilyelltG~~Pf~~~~~-~~l~~~i~~~~~-~~p----~~~s  269 (708)
                      .......|++.|+|||++.+.   .+ +.++|||||||++|+|++|..||..... .+....+..+.. .++    ...+
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~-~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd06616         162 IAKTRDAGCRPYMAPERIDPSARDGY-DVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFS  240 (288)
T ss_pred             CccccccCccCccCHHHhccccccCC-cchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccC
Confidence            333445789999999999776   34 4789999999999999999999976542 122223333322 222    2368


Q ss_pred             HHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         270 TDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       270 ~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .++.+||++||..||.+|||++++.
T Consensus       241 ~~l~~li~~~l~~~p~~Rpt~~~i~  265 (288)
T cd06616         241 PSFVNFINLCLIKDESKRPKYKELL  265 (288)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHh
Confidence            8999999999999999999999987


No 335
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00  E-value=8.8e-39  Score=345.38  Aligned_cols=254  Identities=34%  Similarity=0.535  Sum_probs=209.0

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeC--CE
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIETE--KT  119 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~--~~  119 (708)
                      ...++|++.+.||+|+||.||+|.+..+++.||||.+.+..........+.+|+.+++++ +||||+++++++...  ..
T Consensus         4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~   83 (337)
T cd07852           4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD   83 (337)
T ss_pred             hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence            456789999999999999999999999999999999876544444456678899999999 999999999998654  46


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         120 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      +|+||||+. ++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~  161 (337)
T cd07852          84 IYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE  161 (337)
T ss_pred             EEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence            899999997 5999988655 78999999999999999999999999999999999999999999999999987654322


Q ss_pred             ------CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-------------
Q psy2648         200 ------KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-------------  260 (708)
Q Consensus       200 ------~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-------------  260 (708)
                            ......|++.|+|||++.+....+.++|||||||++|+|++|+.||.+....+...++...             
T Consensus       162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (337)
T cd07852         162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIK  241 (337)
T ss_pred             ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHH
Confidence                  2234578999999999876544457899999999999999999999876554433332211             


Q ss_pred             --------------CCC----CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         261 --------------KYR----IPFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       261 --------------~~~----~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                                    ...    .....+.++.+||.+||+.||++|||+.++.   |+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~  300 (337)
T cd07852         242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ  300 (337)
T ss_pred             hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence                          000    0112578899999999999999999999988   6643


No 336
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00  E-value=3.4e-38  Score=330.80  Aligned_cols=245  Identities=31%  Similarity=0.494  Sum_probs=205.9

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC---CCCCeeeEEEEEEeCCE-----
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML---DHPNIVKLFQVIETEKT-----  119 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~~~~~-----  119 (708)
                      |++.+.||+|+||.||+|++..+++.||||++............+.+|+.+++++   +||||+++++++.....     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            7899999999999999999999999999999976543333334566788887766   69999999999988776     


Q ss_pred             EEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC
Q psy2648         120 LYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP  197 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~  197 (708)
                      +|++|||+.+ +|.+++....  .+++.+++.++.||+.||.|||+++|+|+||||+|||++.++.+||+|||++.....
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~  159 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSF  159 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence            9999999975 8999887643  589999999999999999999999999999999999999999999999999877654


Q ss_pred             CCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-----CCCC-------
Q psy2648         198 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK-----YRIP-------  265 (708)
Q Consensus       198 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~-----~~~p-------  265 (708)
                      ........+++.|+|||++.+..++ .++|||||||++|+|++|..||.+.+..+...++....     ...|       
T Consensus       160 ~~~~~~~~~~~~~~~PE~~~~~~~~-~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T cd07838         160 EMALTSVVVTLWYRAPEVLLQSSYA-TPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR  238 (287)
T ss_pred             CcccccccccccccChHHhccCCCC-CcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch
Confidence            4444556688999999999887764 78999999999999999999999888776666554310     0000       


Q ss_pred             ---------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         266 ---------------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       266 ---------------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                     ...++++.++|.+||+.||.+||+++++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il  282 (287)
T cd07838         239 SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEAL  282 (287)
T ss_pred             hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHh
Confidence                           12457789999999999999999999876


No 337
>KOG0574|consensus
Probab=100.00  E-value=1.6e-41  Score=341.03  Aligned_cols=243  Identities=28%  Similarity=0.494  Sum_probs=213.4

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      -|.++.+||+|+||.||+|.|+.+|+.||||.+.-+    .+++.+..|+.||++.+.|+||++|+.|-....+||||||
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY  109 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY  109 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence            488999999999999999999999999999988643    4678899999999999999999999999888899999999


Q ss_pred             cCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCcccc
Q psy2648         127 ASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTF  204 (708)
Q Consensus       127 ~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~~~  204 (708)
                      |..|++.+.++.+ ..++|.++..+++..+.||+|||...-||||||..||||+.+|..||+|||.+..+.+. .+-++.
T Consensus       110 CGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTV  189 (502)
T KOG0574|consen  110 CGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTV  189 (502)
T ss_pred             cCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCcc
Confidence            9999999988755 67999999999999999999999999999999999999999999999999999776432 345688


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHhhh
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK---YRIPFYMSTDCENLLKKFLV  281 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~---~~~p~~~s~~~~~Li~~~L~  281 (708)
                      .|||.|||||++..-.|+ .++||||||++..||..|++||.+..+...+-.|-...   ++-|...|.++.|+|++||.
T Consensus       190 IGTPFWMAPEVI~EIGY~-~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLi  268 (502)
T KOG0574|consen  190 IGTPFWMAPEVIEEIGYD-TKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLI  268 (502)
T ss_pred             ccCcccccHHHHHHhccc-hhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhc
Confidence            999999999999988887 68999999999999999999998865544333332221   22355678899999999999


Q ss_pred             hCCCCCCCHHHHh
Q psy2648         282 LNPAKRASLEVSG  294 (708)
Q Consensus       282 ~dP~~Rps~~~~~  294 (708)
                      ++|++|.|+-++.
T Consensus       269 K~PE~R~TA~~L~  281 (502)
T KOG0574|consen  269 KKPEERKTALRLC  281 (502)
T ss_pred             CCHHHHHHHHHHh
Confidence            9999999987765


No 338
>KOG4645|consensus
Probab=100.00  E-value=7.4e-41  Score=387.63  Aligned_cols=252  Identities=29%  Similarity=0.491  Sum_probs=219.7

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +++-...||.|.||+||-|.+..+|+..|||-|............+.+|..++..|+|||+|++|++=...+.+||.|||
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEy 1315 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEY 1315 (1509)
T ss_pred             eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHH
Confidence            56778899999999999999999999999999876544444455678999999999999999999998888899999999


Q ss_pred             cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-----CCc
Q psy2648         127 ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-----NKL  201 (708)
Q Consensus       127 ~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-----~~~  201 (708)
                      |++|+|.+.+...+-.+|...+.|..|++.|+.|||++|||||||||+||||+.+|.||+.|||.|..+...     ..+
T Consensus      1316 C~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el 1395 (1509)
T KOG4645|consen 1316 CEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGEL 1395 (1509)
T ss_pred             hccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHH
Confidence            999999998876566788888999999999999999999999999999999999999999999998765432     345


Q ss_pred             cccccCCcccccccccCCcc--CCCchhHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHcCC-CCCCCCCCHHHHHHHH
Q psy2648         202 DTFCGSPPYAAPELFQGKKY--DGPEVDVWSLGVILYTLVSGSLPFDGS-TLRELRERVLRGK-YRIPFYMSTDCENLLK  277 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~--~~~~~DIWSlGvilyelltG~~Pf~~~-~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~  277 (708)
                      +...|||.|||||++.+..-  ++.+.||||||||+.||+||+.||... +.-.+.-+|..|. +++|..+|.+.+|||.
T Consensus      1396 ~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle 1475 (1509)
T KOG4645|consen 1396 QSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLE 1475 (1509)
T ss_pred             HhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHH
Confidence            67889999999999987542  356899999999999999999999764 3446667777774 5689999999999999


Q ss_pred             HhhhhCCCCCCCHHHHhhhhh
Q psy2648         278 KFLVLNPAKRASLEVSGEVTL  298 (708)
Q Consensus       278 ~~L~~dP~~Rps~~~~~~~~~  298 (708)
                      +||+.||.+|-++.|+++...
T Consensus      1476 ~Cl~~dP~~Rw~~~qlle~~f 1496 (1509)
T KOG4645|consen 1476 HCLEQDPKMRWTASQLLEHAF 1496 (1509)
T ss_pred             HHHhcCchhhhHHHHHHHhhc
Confidence            999999999999888876554


No 339
>KOG0596|consensus
Probab=100.00  E-value=2.4e-39  Score=348.15  Aligned_cols=245  Identities=28%  Similarity=0.406  Sum_probs=201.7

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      .|++++.||+|+.++||++..-. .+.||+|.+.-...+...+..+..|+.+|.+|+ |-+||+|||+-..++.+|||||
T Consensus       362 ~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  362 EYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             hhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            59999999999999999998643 455777766655566777888999999999996 9999999999989999999999


Q ss_pred             ccCCCChHHHHHHcCCCC-HHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC---Cc
Q psy2648         126 YASGGEVFDYLVLHGRMK-EKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN---KL  201 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~-e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~---~~  201 (708)
                      |-+ -||...|....... ...++.|..|++.|+.++|++||||.||||.|+|+-+ |.+||+|||+|+.+..+.   .-
T Consensus       441 ~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTTsI~k  518 (677)
T KOG0596|consen  441 CGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTTSIVK  518 (677)
T ss_pred             ccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-eeEEeeeechhcccCccccceee
Confidence            754 58999888776544 4688999999999999999999999999999999874 789999999998876543   23


Q ss_pred             cccccCCcccccccccCCccC----------CCchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHcC--CCCCCCCC
Q psy2648         202 DTFCGSPPYAAPELFQGKKYD----------GPEVDVWSLGVILYTLVSGSLPFDGST-LRELRERVLRG--KYRIPFYM  268 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~~----------~~~~DIWSlGvilyelltG~~Pf~~~~-~~~l~~~i~~~--~~~~p~~~  268 (708)
                      .+.|||+.||+||.+....++          ++++||||||||||+|+.|+.||.... ...-+..|..-  ++.+|..-
T Consensus       519 dsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~  598 (677)
T KOG0596|consen  519 DSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIP  598 (677)
T ss_pred             ccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCC
Confidence            578999999999999655443          578999999999999999999997532 22333344433  23556554


Q ss_pred             CHH-HHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         269 STD-CENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       269 s~~-~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +.. +.++++.||..||.+||++.+++
T Consensus       599 ~~~~li~~mK~CL~rdPkkR~si~eLL  625 (677)
T KOG0596|consen  599 ENDELIDVMKCCLARDPKKRWSIPELL  625 (677)
T ss_pred             CchHHHHHHHHHHhcCcccCCCcHHHh
Confidence            444 99999999999999999999866


No 340
>KOG0983|consensus
Probab=100.00  E-value=2.6e-39  Score=322.16  Aligned_cols=250  Identities=29%  Similarity=0.451  Sum_probs=210.8

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEE
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~  120 (708)
                      ...+...+++..||.|+.|.|++++++.+|...|||.+.++. +.++.+++++.++++.+- +.|+||+.|++|-++..+
T Consensus        88 ~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV  166 (391)
T KOG0983|consen   88 QADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDV  166 (391)
T ss_pred             ccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchH
Confidence            444556677889999999999999999999999999998764 567778899999887554 589999999999999999


Q ss_pred             EEEEeccCCCChHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCCEEEcCCCcEEEEeccCccccCCC
Q psy2648         121 YLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG  198 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~-~~~~l~e~~~~~i~~QI~~aL~yLH~-~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~  198 (708)
                      +|.||.+.- .+...++ ..++++|.-+-.+..-++.||.||-. ++|+|||+||+|||||..|+|||||||++..+.+.
T Consensus       167 ~IcMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS  245 (391)
T KOG0983|consen  167 FICMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS  245 (391)
T ss_pred             HHHHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecc
Confidence            999999853 3333333 34679999999999999999999975 68999999999999999999999999999877665


Q ss_pred             CCccccccCCcccccccccCC---ccCCCchhHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHcCCCC-CCC--CCCHH
Q psy2648         199 NKLDTFCGSPPYAAPELFQGK---KYDGPEVDVWSLGVILYTLVSGSLPFDGS-TLRELRERVLRGKYR-IPF--YMSTD  271 (708)
Q Consensus       199 ~~~~~~~Gt~~Y~APE~l~~~---~~~~~~~DIWSlGvilyelltG~~Pf~~~-~~~~l~~~i~~~~~~-~p~--~~s~~  271 (708)
                      .......|.+.|||||.+.-.   .|+ .++|||||||.|+||+||+.||.+. +..++..+|+...++ +|.  ..|++
T Consensus       246 kAhtrsAGC~~YMaPERidp~~~~kYD-iRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~  324 (391)
T KOG0983|consen  246 KAHTRSAGCAAYMAPERIDPPDKPKYD-IRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPD  324 (391)
T ss_pred             cccccccCCccccCccccCCCCCCccc-hhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHH
Confidence            555567899999999998533   565 6899999999999999999999984 455777888876543 343  37999


Q ss_pred             HHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         272 CENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       272 ~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +++|+..||++|+.+||...+++
T Consensus       325 F~~fv~~CL~kd~r~RP~Y~~Ll  347 (391)
T KOG0983|consen  325 FQSFVKDCLTKDHRKRPKYNKLL  347 (391)
T ss_pred             HHHHHHHHhhcCcccCcchHHHh
Confidence            99999999999999999988765


No 341
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00  E-value=3.4e-38  Score=331.45  Aligned_cols=245  Identities=31%  Similarity=0.470  Sum_probs=199.3

Q ss_pred             CeEEEeEEcccCceEEEEEEE----cCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEe--CCEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKH----VPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIET--EKTL  120 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~----~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~  120 (708)
                      +|++.+.||+|+||.||+|..    ..+++.||||.+...  .....+.+.+|+++++.++||||+++++++..  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   82 (284)
T cd05081           5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   82 (284)
T ss_pred             cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence            699999999999999999984    467889999998654  23445678899999999999999999998654  3468


Q ss_pred             EEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         121 YLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      |+||||+++++|.+++... +.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~  162 (284)
T cd05081          83 RLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDK  162 (284)
T ss_pred             EEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence            9999999999999999765 468999999999999999999999999999999999999999999999999998654332


Q ss_pred             Cc----cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHH----------------HHHHHHHc
Q psy2648         200 KL----DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLR----------------ELRERVLR  259 (708)
Q Consensus       200 ~~----~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~----------------~l~~~i~~  259 (708)
                      ..    ....++..|+|||++.+..+ +.++|||||||++|+|++|..|+......                .+.+.+..
T Consensus       163 ~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd05081         163 EYYKVREPGESPIFWYAPESLTESKF-SVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKN  241 (284)
T ss_pred             cceeecCCCCCceEeeCHHHhccCCc-ChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhc
Confidence            11    11223456999999987776 47899999999999999988776543211                11122222


Q ss_pred             C-CCCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         260 G-KYRIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       260 ~-~~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      + .+..+...+.++.+||.+||..||++|||++++.
T Consensus       242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~  277 (284)
T cd05081         242 NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELA  277 (284)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            2 2234456788999999999999999999999876


No 342
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00  E-value=2.6e-38  Score=333.29  Aligned_cols=248  Identities=33%  Similarity=0.596  Sum_probs=211.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEc---CCCcEEEEEEeccCCCC--hhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHV---PTGKEVAIKIIDKTQLN--PGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~---~tg~~vAvK~i~~~~~~--~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~  120 (708)
                      +|++.+.||+|+||.||+|++.   .+++.||||++.+....  ....+.+.+|+++++.+ +||||++++++++....+
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            4899999999999999999864   46789999999764321  22345678999999999 599999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q psy2648         121 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK  200 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~  200 (708)
                      |+||||+++|+|.+++.....+++.+++.++.|++.||+|||+.+++||||||+|||++.++.++|+|||++..+.....
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE  160 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence            99999999999999998888899999999999999999999999999999999999999999999999999876543321


Q ss_pred             --ccccccCCcccccccccCCc-cCCCchhHHHHHHHHHHHHcCCCCCCCC----CHHHHHHHHHcCCCCCCCCCCHHHH
Q psy2648         201 --LDTFCGSPPYAAPELFQGKK-YDGPEVDVWSLGVILYTLVSGSLPFDGS----TLRELRERVLRGKYRIPFYMSTDCE  273 (708)
Q Consensus       201 --~~~~~Gt~~Y~APE~l~~~~-~~~~~~DIWSlGvilyelltG~~Pf~~~----~~~~l~~~i~~~~~~~p~~~s~~~~  273 (708)
                        ....+|++.|+|||.+.+.. ....++||||||+++|+|++|..||...    ...++.+.+.......|...+.++.
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  240 (288)
T cd05583         161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEAR  240 (288)
T ss_pred             cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcccCHHHH
Confidence              23457899999999987654 2347899999999999999999999643    2455666666777777888899999


Q ss_pred             HHHHHhhhhCCCCCCCHHHHh
Q psy2648         274 NLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       274 ~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ++|.+||+.||++|||+.++.
T Consensus       241 ~li~~~l~~~p~~R~t~~~~~  261 (288)
T cd05583         241 DFIQKLLEKDPKKRLGANGAD  261 (288)
T ss_pred             HHHHHHhcCCHhhccCcchHH
Confidence            999999999999999976553


No 343
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00  E-value=4.1e-38  Score=339.62  Aligned_cols=251  Identities=26%  Similarity=0.443  Sum_probs=204.7

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCC--CcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEe----CCE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPT--GKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIET----EKT  119 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~t--g~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~----~~~  119 (708)
                      +|++.+.||+|+||.||+|++..+  ++.||||++..........+.+.+|+++++.+ +||||+++++....    ...
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            589999999999999999999988  99999999875433333456678999999999 59999999987543    246


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         120 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      +|++|||+. ++|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~  159 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP  159 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence            899999986 5899999888889999999999999999999999999999999999999999999999999997654321


Q ss_pred             -----CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC--------------
Q psy2648         200 -----KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG--------------  260 (708)
Q Consensus       200 -----~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~--------------  260 (708)
                           ......|++.|+|||++.+....+.++|||||||++|+|++|..||.+.+.....+.+...              
T Consensus       160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (332)
T cd07857         160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGS  239 (332)
T ss_pred             ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhh
Confidence                 2234679999999998866432357899999999999999999999876644433322211              


Q ss_pred             -----------C---CCCC---CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         261 -----------K---YRIP---FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       261 -----------~---~~~p---~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                                 .   ..++   ...+.++.+||.+||+.||.+|||++++.   |+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~  297 (332)
T cd07857         240 PKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAI  297 (332)
T ss_pred             hhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhh
Confidence                       0   0011   12478899999999999999999999987   7654


No 344
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00  E-value=4.1e-38  Score=341.84  Aligned_cols=250  Identities=26%  Similarity=0.458  Sum_probs=205.4

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC------C
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE------K  118 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------~  118 (708)
                      .++|.+.+.||+|+||.||+|.+..+++.||||++.+........+.+.+|+.+++.++||||+++++++...      .
T Consensus        16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (345)
T cd07877          16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   95 (345)
T ss_pred             cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccc
Confidence            3689999999999999999999999999999999976543334456688999999999999999999988643      3


Q ss_pred             EEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC
Q psy2648         119 TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG  198 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~  198 (708)
                      .+|+++|++ +++|.+++. ...+++..++.++.||+.||+|||++||+||||||+||++++++.+||+|||++....  
T Consensus        96 ~~~lv~~~~-~~~L~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~--  171 (345)
T cd07877          96 DVYLVTHLM-GADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--  171 (345)
T ss_pred             cEEEEehhc-ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccc--
Confidence            478899887 778987765 4579999999999999999999999999999999999999999999999999987543  


Q ss_pred             CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC----------------
Q psy2648         199 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY----------------  262 (708)
Q Consensus       199 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~----------------  262 (708)
                      .......|++.|+|||++.+....+.++|||||||++|+|++|+.||...+.......+.....                
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (345)
T cd07877         172 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR  251 (345)
T ss_pred             ccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHH
Confidence            2234567899999999987643335789999999999999999999987665443333322100                


Q ss_pred             -------CCC--------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         263 -------RIP--------FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       263 -------~~p--------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                             ..|        ...++++.+||.+||+.||.+||++.++.   |+..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~  305 (345)
T cd07877         252 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  305 (345)
T ss_pred             HHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence                   011        13578899999999999999999999887   7654


No 345
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00  E-value=3.9e-38  Score=331.66  Aligned_cols=251  Identities=33%  Similarity=0.531  Sum_probs=216.0

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      ....|++.+.||+|+||.||+|.+..+++.||+|++.....   ..+.+.+|+++++.++||||+++++.+.....+|+|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   93 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV   93 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence            34569999999999999999999999999999999975432   456688999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCc
Q psy2648         124 MEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKL  201 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~  201 (708)
                      +||+++++|.+++.... .+++.++..++.||+.||.|||+.||+|+||||+||+++.++.+||+|||++...... ...
T Consensus        94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~  173 (286)
T cd06614          94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKR  173 (286)
T ss_pred             EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhh
Confidence            99999999999998877 8999999999999999999999999999999999999999999999999987654322 122


Q ss_pred             cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-CC--CCCCCHHHHHHHHH
Q psy2648         202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RI--PFYMSTDCENLLKK  278 (708)
Q Consensus       202 ~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~-~~--p~~~s~~~~~Li~~  278 (708)
                      ....+++.|+|||++.+..++ .++|+|||||++|+|++|..||...+.......+..... ..  +..++.++.++|++
T Consensus       174 ~~~~~~~~y~~PE~~~~~~~~-~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  252 (286)
T cd06614         174 NSVVGTPYWMAPEVIKRKDYG-PKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNK  252 (286)
T ss_pred             ccccCCcccCCHhHhcCCCCC-CccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHH
Confidence            345688899999999887764 789999999999999999999998776655555443322 22  22367899999999


Q ss_pred             hhhhCCCCCCCHHHHh---hhhh
Q psy2648         279 FLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       279 ~L~~dP~~Rps~~~~~---~~~~  298 (708)
                      ||+.||.+||+++++.   |+..
T Consensus       253 ~l~~~p~~Rpt~~~il~~~~~~~  275 (286)
T cd06614         253 CLVKDPEKRPSAEELLQHPFLKK  275 (286)
T ss_pred             HhccChhhCcCHHHHhhChHhhc
Confidence            9999999999999987   6653


No 346
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00  E-value=2.6e-38  Score=341.21  Aligned_cols=253  Identities=28%  Similarity=0.383  Sum_probs=208.8

Q ss_pred             cCCeEE-EeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChh------------hHHHHHHHHHHHHhCCCCCeeeEE
Q psy2648          45 IGKYKL-LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG------------SLQKLFREVRIMKMLDHPNIVKLF  111 (708)
Q Consensus        45 ~~~Y~i-~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~------------~~~~~~~Ei~il~~l~HpnIv~l~  111 (708)
                      -++|.. .+.||+|+||.||+|.+..+++.||||++........            ....+.+|+++++.++||||++++
T Consensus         7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   86 (335)
T PTZ00024          7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV   86 (335)
T ss_pred             ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence            457864 5779999999999999999999999999875432210            012467899999999999999999


Q ss_pred             EEEEeCCEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccC
Q psy2648         112 QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF  191 (708)
Q Consensus       112 ~~~~~~~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGl  191 (708)
                      +++..++.+|+||||+. |+|.+++.....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~  165 (335)
T PTZ00024         87 DVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGL  165 (335)
T ss_pred             EEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccc
Confidence            99999999999999997 59999998888899999999999999999999999999999999999999999999999999


Q ss_pred             ccccCC---------------CCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q psy2648         192 SNEFTP---------------GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRER  256 (708)
Q Consensus       192 s~~~~~---------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~  256 (708)
                      +.....               ........+++.|+|||++.+....+.++|||||||++|+|++|..||.+.+..+....
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~  245 (335)
T PTZ00024        166 ARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGR  245 (335)
T ss_pred             eeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            875541               11122345788999999997755445799999999999999999999998876665554


Q ss_pred             HHcCC--C-------------------C-------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         257 VLRGK--Y-------------------R-------IPFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       257 i~~~~--~-------------------~-------~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                      +....  .                   .       .....+.++.++|.+||..||++||++++++   |+..
T Consensus       246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~  318 (335)
T PTZ00024        246 IFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKS  318 (335)
T ss_pred             HHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCC
Confidence            43210  0                   0       0123478899999999999999999999988   6653


No 347
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00  E-value=1.8e-38  Score=344.33  Aligned_cols=250  Identities=27%  Similarity=0.460  Sum_probs=209.3

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE-----
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT-----  119 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~-----  119 (708)
                      -++|++.+.||+|+||.||+|++..+++.||||++..........+.+.+|+.+++.++||||+++++++.....     
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence            468999999999999999999999999999999987654444445667899999999999999999998876554     


Q ss_pred             -EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC
Q psy2648         120 -LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG  198 (708)
Q Consensus       120 -~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~  198 (708)
                       +|+|+||+ +++|.+++.. ..+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++..... 
T Consensus        94 ~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~-  170 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDD-  170 (343)
T ss_pred             cEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccccc-
Confidence             89999999 5699888764 5799999999999999999999999999999999999999999999999999876533 


Q ss_pred             CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC----------------
Q psy2648         199 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY----------------  262 (708)
Q Consensus       199 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~----------------  262 (708)
                       ......+++.|+|||.+.+....+.++|||||||++|+|++|+.||.+.+..+....+....-                
T Consensus       171 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  249 (343)
T cd07851         171 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESAR  249 (343)
T ss_pred             -cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHH
Confidence             234567899999999987643445799999999999999999999988776554444432110                


Q ss_pred             ---------------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh
Q psy2648         263 ---------------RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTL  298 (708)
Q Consensus       263 ---------------~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~  298 (708)
                                     ......++++.+||.+||..||.+|||+++++   |+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~  303 (343)
T cd07851         250 NYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAE  303 (343)
T ss_pred             HHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccc
Confidence                           00113588999999999999999999999987   6653


No 348
>KOG4279|consensus
Probab=100.00  E-value=7.3e-40  Score=357.20  Aligned_cols=241  Identities=27%  Similarity=0.458  Sum_probs=208.2

Q ss_pred             eEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCC
Q psy2648          52 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGE  131 (708)
Q Consensus        52 ~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg~  131 (708)
                      -+||+|.||.||-|++..|....|||-|...  +....+-+..||.+.++|+|.|||++++.+..++++-|.||-++||+
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpek--dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS  658 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEK--DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS  658 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccc--cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence            3799999999999999999999999998743  33455668899999999999999999999999999999999999999


Q ss_pred             hHHHHHHc-CCC--CHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcC-CCcEEEEeccCccccCCC-CCcccccc
Q psy2648         132 VFDYLVLH-GRM--KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS-EMNIKIADFGFSNEFTPG-NKLDTFCG  206 (708)
Q Consensus       132 L~~~i~~~-~~l--~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~-~~~iKL~DFGls~~~~~~-~~~~~~~G  206 (708)
                      |.+.+... |++  .|..+-.|.+||++||.|||++.|||||||-+|+|++. .|.+||+|||-++....- ..+.++.|
T Consensus       659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTG  738 (1226)
T KOG4279|consen  659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTG  738 (1226)
T ss_pred             HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcccccccc
Confidence            99999876 777  78889999999999999999999999999999999975 689999999999876432 34578999


Q ss_pred             CCcccccccccC-CccCCCchhHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHH--HcCCCCCCCCCCHHHHHHHHHhhhh
Q psy2648         207 SPPYAAPELFQG-KKYDGPEVDVWSLGVILYTLVSGSLPFDGS-TLRELRERV--LRGKYRIPFYMSTDCENLLKKFLVL  282 (708)
Q Consensus       207 t~~Y~APE~l~~-~~~~~~~~DIWSlGvilyelltG~~Pf~~~-~~~~l~~~i--~~~~~~~p~~~s~~~~~Li~~~L~~  282 (708)
                      |..|||||++.. ..-.|+++|||||||++.||.||++||... +++...-++  .+..+++|..+|.+++++|.+|+..
T Consensus       739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFep  818 (1226)
T KOG4279|consen  739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEP  818 (1226)
T ss_pred             chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCC
Confidence            999999999953 333478999999999999999999999753 233322222  2345678999999999999999999


Q ss_pred             CCCCCCCHHHHh
Q psy2648         283 NPAKRASLEVSG  294 (708)
Q Consensus       283 dP~~Rps~~~~~  294 (708)
                      ||.+||++.+++
T Consensus       819 d~~~R~sA~~LL  830 (1226)
T KOG4279|consen  819 DPCDRPSAKDLL  830 (1226)
T ss_pred             CcccCccHHHhc
Confidence            999999999877


No 349
>KOG4250|consensus
Probab=100.00  E-value=1.7e-39  Score=359.26  Aligned_cols=242  Identities=33%  Similarity=0.520  Sum_probs=201.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC------E
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK------T  119 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------~  119 (708)
                      +.+...+.||+|+||.||+++++.||+.||||.+++.. .....++..+|++||++|+|||||+++++=++..      .
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~   91 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL   91 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence            56788899999999999999999999999999998754 3445677889999999999999999999866543      4


Q ss_pred             EEEEEeccCCCChHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEc--CCCc--EEEEeccCc
Q psy2648         120 LYLVMEYASGGEVFDYLVLH---GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD--SEMN--IKIADFGFS  192 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~---~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld--~~~~--iKL~DFGls  192 (708)
                      ..+|||||+||+|+..+.+-   ..|+|.+.+.++..++.||.|||++||+||||||+||++-  .+|.  -||+|||.|
T Consensus        92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A  171 (732)
T KOG4250|consen   92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA  171 (732)
T ss_pred             ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence            68999999999999998643   4699999999999999999999999999999999999984  3454  499999999


Q ss_pred             cccCCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCC----CHHHHHHHHHcC--------
Q psy2648         193 NEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS----TLRELRERVLRG--------  260 (708)
Q Consensus       193 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~----~~~~l~~~i~~~--------  260 (708)
                      +...+++...++.||+.|.+||++..+.+.+..+|.|||||++|+.+||.+||...    +..++...+...        
T Consensus       172 rel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~  251 (732)
T KOG4250|consen  172 RELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIG  251 (732)
T ss_pred             ccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEe
Confidence            99999999999999999999999986444567899999999999999999999642    223343333321        


Q ss_pred             -------C------CCCCCCCCHH----HHHHHHHhhhhCCCCCC
Q psy2648         261 -------K------YRIPFYMSTD----CENLLKKFLVLNPAKRA  288 (708)
Q Consensus       261 -------~------~~~p~~~s~~----~~~Li~~~L~~dP~~Rp  288 (708)
                             .      +++|..+++.    +..++..||..||++|-
T Consensus       252 ~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  252 AQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             eecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence                   1      2234445543    45677889999999998


No 350
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00  E-value=2.5e-38  Score=331.08  Aligned_cols=246  Identities=32%  Similarity=0.528  Sum_probs=207.4

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYA  127 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~  127 (708)
                      |++.+.||+|+||.||+|.+..+++.||+|.+............+.+|+.+|+.++||||+++++++..+..+|+||||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            67889999999999999999999999999999766544445567889999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccccc
Q psy2648         128 SGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFC  205 (708)
Q Consensus       128 ~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~~~  205 (708)
                      ++ +|.+++... ..+++.++..++.||+.||.|||+++|+|+||||+||+++.++.+||+|||++....... ......
T Consensus        81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~  159 (283)
T cd05118          81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYV  159 (283)
T ss_pred             CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCcc
Confidence            75 888888764 578999999999999999999999999999999999999999999999999987664433 223346


Q ss_pred             cCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-------------------CCCC--
Q psy2648         206 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-------------------KYRI--  264 (708)
Q Consensus       206 Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-------------------~~~~--  264 (708)
                      ++..|+|||.+.+....+.++|||||||++|+|++|+.||.+.+..+...++...                   ...+  
T Consensus       160 ~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd05118         160 VTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPK  239 (283)
T ss_pred             CcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhcc
Confidence            7889999999987633457999999999999999999999887765544443221                   0001  


Q ss_pred             ---------CCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         265 ---------PFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       265 ---------p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                               ....+.++.++|.+||..||.+||+++++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll  278 (283)
T cd05118         240 KAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQAL  278 (283)
T ss_pred             ccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHh
Confidence                     113577899999999999999999999876


No 351
>KOG0577|consensus
Probab=100.00  E-value=1.1e-39  Score=351.36  Aligned_cols=243  Identities=30%  Similarity=0.467  Sum_probs=211.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      .|.=++.||.|+||.||-|++..+.+.||||.+.-... ..+..+.++.|+++|++|+|||+|.+-++|-.+...|||||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            46678899999999999999999999999999976533 34567789999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcccc
Q psy2648         126 YASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~-~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~  204 (708)
                      ||-| +-.|.+.- +.++.|.++..|..+.+.||.|||+++.||||||..||||.+.|.|||+|||.+....+   .+++
T Consensus       107 YClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P---AnsF  182 (948)
T KOG0577|consen  107 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP---ANSF  182 (948)
T ss_pred             HHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc---hhcc
Confidence            9976 44555433 46799999999999999999999999999999999999999999999999998876544   4689


Q ss_pred             ccCCcccccccccC---CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-CCCC-CCCHHHHHHHHHh
Q psy2648         205 CGSPPYAAPELFQG---KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIPF-YMSTDCENLLKKF  279 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~---~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~-~~p~-~~s~~~~~Li~~~  279 (708)
                      +|||.|||||++..   ..|++ ++|||||||+..||...++|+..++.......|..... .++. ..|..+++|+..|
T Consensus       183 vGTPywMAPEVILAMDEGqYdg-kvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~C  261 (948)
T KOG0577|consen  183 VGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSC  261 (948)
T ss_pred             cCCccccchhHheeccccccCC-ccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHH
Confidence            99999999999853   45775 89999999999999999999999988776666665443 3443 4688899999999


Q ss_pred             hhhCCCCCCCHHHHh
Q psy2648         280 LVLNPAKRASLEVSG  294 (708)
Q Consensus       280 L~~dP~~Rps~~~~~  294 (708)
                      |++-|.+|||.++++
T Consensus       262 LqKipqeRptse~ll  276 (948)
T KOG0577|consen  262 LQKIPQERPTSEELL  276 (948)
T ss_pred             HhhCcccCCcHHHHh
Confidence            999999999999766


No 352
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00  E-value=1e-37  Score=331.06  Aligned_cols=247  Identities=18%  Similarity=0.246  Sum_probs=194.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCC---CcEEEEEEeccCCCCh--hh-------HHHHHHHHHHHHhCCCCCeeeEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPT---GKEVAIKIIDKTQLNP--GS-------LQKLFREVRIMKMLDHPNIVKLFQV  113 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~t---g~~vAvK~i~~~~~~~--~~-------~~~~~~Ei~il~~l~HpnIv~l~~~  113 (708)
                      .+|++.+.||+|+||.||+|.+..+   +..+|+|+........  +.       ......+...+..++|+||+++++.
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            5899999999999999999999887   7788888754332111  00       0112233445567789999999997


Q ss_pred             EEeCC----EEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEec
Q psy2648         114 IETEK----TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADF  189 (708)
Q Consensus       114 ~~~~~----~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DF  189 (708)
                      .....    ..|++||++.. ++.+.+......++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+||
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DF  170 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDY  170 (294)
T ss_pred             eeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEc
Confidence            65543    45889998754 66666665556789999999999999999999999999999999999999999999999


Q ss_pred             cCccccCCCC--------CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCH---------HH
Q psy2648         190 GFSNEFTPGN--------KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTL---------RE  252 (708)
Q Consensus       190 Gls~~~~~~~--------~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~---------~~  252 (708)
                      |+++.+....        ......||+.|+|||++.+..++ .++|||||||+||+|++|.+||.+.+.         .+
T Consensus       171 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~-~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~  249 (294)
T PHA02882        171 GIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVT-RRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCD  249 (294)
T ss_pred             CCceeeccCCcccccccccccccCCCccccCHHHhCCCCCC-cHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHH
Confidence            9997653221        12335799999999999988874 899999999999999999999987632         12


Q ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHhh
Q psy2648         253 LRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       253 l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      +..++..++..++ ..++++.++++.||..+|++||+++++..
T Consensus       250 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        250 FIKRLHEGKIKIK-NANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHHhhhhhhccC-CCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            3455555554444 45789999999999999999999998763


No 353
>KOG1095|consensus
Probab=100.00  E-value=1.9e-38  Score=370.27  Aligned_cols=248  Identities=27%  Similarity=0.460  Sum_probs=213.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCc-----EEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGK-----EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~-----~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  120 (708)
                      .+-++.+.||+|.||.||.|....-..     .||||.+.+.. +..+...|++|+.+|+.++|||||++++++-+....
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~  770 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP  770 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence            356789999999999999998764332     49999887543 456677899999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcc
Q psy2648         121 YLVMEYASGGEVFDYLVLH-------GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN  193 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~-------~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~  193 (708)
                      +|++|||+||||..||++.       ..++..+...++.||+.|++||+++++|||||...|+||+....+||+|||||+
T Consensus       771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlAr  850 (1025)
T KOG1095|consen  771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLAR  850 (1025)
T ss_pred             EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhH
Confidence            9999999999999999876       247889999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCc-cccccC--CcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHc-CCCCCCCCC
Q psy2648         194 EFTPGNKL-DTFCGS--PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLR-GKYRIPFYM  268 (708)
Q Consensus       194 ~~~~~~~~-~~~~Gt--~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~-~~~~~p~~~  268 (708)
                      ........ ....+.  ..|||||.+....+. .++|||||||+|||+++ |..||.+.+..++...+++ |....|.++
T Consensus       851 Diy~~~yyr~~~~a~lPvkWm~PEsl~d~iFt-skSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~C  929 (1025)
T KOG1095|consen  851 DIYDKDYYRKHGEAMLPVKWMPPESLKDGIFT-SKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSYC  929 (1025)
T ss_pred             hhhhchheeccCccccceecCCHHHHhhcccc-cccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCCC
Confidence            54322211 111223  469999999987775 79999999999999999 9999999999988885554 566788999


Q ss_pred             CHHHHHHHHHhhhhCCCCCCCHHHHhh
Q psy2648         269 STDCENLLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       269 s~~~~~Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      +..+.++|..||..+|++||++..+..
T Consensus       930 P~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  930 PEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             ChHHHHHHHHHccCChhhCccHHHHHh
Confidence            999999999999999999999987663


No 354
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00  E-value=1.5e-37  Score=333.05  Aligned_cols=243  Identities=29%  Similarity=0.447  Sum_probs=208.0

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      .|...+.||+|+||.||++++..+++.||||++.+... ..+....+.+|+++++.++||||+++++++..+...|+|||
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  105 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME  105 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence            48899999999999999999999999999999976533 23445678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcccc
Q psy2648         126 YASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~-~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~  204 (708)
                      |+.| +|.+.+.. ...+++.++..++.||+.||.|||+++|+||||+|+||+++.++.+||+|||++.....   ....
T Consensus       106 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~---~~~~  181 (317)
T cd06635         106 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP---ANSF  181 (317)
T ss_pred             CCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC---cccc
Confidence            9975 77777654 45689999999999999999999999999999999999999999999999999865432   2345


Q ss_pred             ccCCccccccccc---CCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC-C-CCCCCHHHHHHHHHh
Q psy2648         205 CGSPPYAAPELFQ---GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR-I-PFYMSTDCENLLKKF  279 (708)
Q Consensus       205 ~Gt~~Y~APE~l~---~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~-~-p~~~s~~~~~Li~~~  279 (708)
                      .|++.|+|||++.   ...+ ..++|||||||++|+|++|..||...+.......+..+... . +...++.+.+||.+|
T Consensus       182 ~~~~~y~aPE~~~~~~~~~~-~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  260 (317)
T cd06635         182 VGTPYWMAPEVILAMDEGQY-DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSC  260 (317)
T ss_pred             cCCccccChhhhhcCCCCCC-CccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHH
Confidence            7899999999984   2334 47899999999999999999999887776666666554332 2 335678899999999


Q ss_pred             hhhCCCCCCCHHHHh
Q psy2648         280 LVLNPAKRASLEVSG  294 (708)
Q Consensus       280 L~~dP~~Rps~~~~~  294 (708)
                      |+.||.+||+++++.
T Consensus       261 l~~~p~~Rpt~~~il  275 (317)
T cd06635         261 LQKIPQDRPTSEELL  275 (317)
T ss_pred             ccCCcccCcCHHHHH
Confidence            999999999999887


No 355
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00  E-value=1.2e-37  Score=329.95  Aligned_cols=250  Identities=26%  Similarity=0.412  Sum_probs=205.3

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEE
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTL  120 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~  120 (708)
                      ...+++|++.+.||+|+||.||+|.+..+++.||||++.+.... .....+.+|+.++..+ +||||+++++++.+...+
T Consensus        11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~   89 (296)
T cd06618          11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDV   89 (296)
T ss_pred             cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeE
Confidence            34567899999999999999999999999999999999765432 3345667788777666 499999999999999999


Q ss_pred             EEEEeccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCCEEEcCCCcEEEEeccCccccCCC
Q psy2648         121 YLVMEYASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG  198 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~-~~~l~e~~~~~i~~QI~~aL~yLH~-~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~  198 (708)
                      |+||||+.+ +|.+++.. .+.+++..+..++.||+.||.|||+ +||+||||+|+|||+++++.+||+|||++..+...
T Consensus        90 ~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~  168 (296)
T cd06618          90 FICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS  168 (296)
T ss_pred             EEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence            999999864 77776654 4578999999999999999999997 69999999999999999999999999998765443


Q ss_pred             CCccccccCCcccccccccCCc----cCCCchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHcCC-CCCCC--CCCH
Q psy2648         199 NKLDTFCGSPPYAAPELFQGKK----YDGPEVDVWSLGVILYTLVSGSLPFDGSTL-RELRERVLRGK-YRIPF--YMST  270 (708)
Q Consensus       199 ~~~~~~~Gt~~Y~APE~l~~~~----~~~~~~DIWSlGvilyelltG~~Pf~~~~~-~~l~~~i~~~~-~~~p~--~~s~  270 (708)
                      .......+++.|+|||++.+..    + +.++|||||||++|+|++|+.||..... .+....+.... ...+.  ..+.
T Consensus       169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~-~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (296)
T cd06618         169 KAKTRSAGCAAYMAPERIDPPDPNPKY-DIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSP  247 (296)
T ss_pred             CcccCCCCCccccCHhhcCCCCCcccc-ccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCH
Confidence            3334456888999999997654    3 3689999999999999999999976332 34444554443 23332  3678


Q ss_pred             HHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         271 DCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       271 ~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ++.+||.+||..||.+||+++++.
T Consensus       248 ~l~~li~~~l~~~p~~Rp~~~~il  271 (296)
T cd06618         248 DFCSFVDLCLTKDHRKRPKYRELL  271 (296)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHh
Confidence            999999999999999999999887


No 356
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00  E-value=6.1e-38  Score=328.82  Aligned_cols=245  Identities=32%  Similarity=0.500  Sum_probs=204.3

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEEEEec
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      |++.+.||+|+||.||+|....+++.||||.+.+.... .......+|+..++.++ ||||+++++++..++..|+||||
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~   79 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY   79 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence            78899999999999999999999999999998765332 22234567999999999 99999999999999999999999


Q ss_pred             cCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcccc
Q psy2648         127 ASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF  204 (708)
Q Consensus       127 ~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~  204 (708)
                      + +|+|.+++....  .+++.++..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++............
T Consensus        80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  158 (283)
T cd07830          80 M-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY  158 (283)
T ss_pred             C-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCC
Confidence            9 789999988765  7899999999999999999999999999999999999999999999999999766544444556


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-------------------CCCCC
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-------------------KYRIP  265 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-------------------~~~~p  265 (708)
                      .++..|+|||++.+......++|+|||||++|+|++|+.||...+..+....+...                   ...+|
T Consensus       159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd07830         159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP  238 (283)
T ss_pred             CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence            78999999999865443357899999999999999999999876654433332210                   00111


Q ss_pred             -----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         266 -----------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       266 -----------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                 ...+.++.+||++||+.||++||+++++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~  278 (283)
T cd07830         239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQAL  278 (283)
T ss_pred             ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHh
Confidence                       12367899999999999999999999876


No 357
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00  E-value=1.5e-37  Score=324.65  Aligned_cols=240  Identities=24%  Similarity=0.377  Sum_probs=193.2

Q ss_pred             EEcccCceEEEEEEEcCC--CcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCC
Q psy2648          53 TIGKGNFAKVKLAKHVPT--GKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGG  130 (708)
Q Consensus        53 ~LG~G~fg~V~la~~~~t--g~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg  130 (708)
                      .||+|+||.||+++....  ...+++|.+.... .....+.+.+|+.+++.++||||+++++.+.+...+|+||||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   80 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG   80 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence            699999999999975433  2356677665432 2334567899999999999999999999999999999999999999


Q ss_pred             ChHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC---CCccc
Q psy2648         131 EVFDYLVLH----GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG---NKLDT  203 (708)
Q Consensus       131 ~L~~~i~~~----~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~---~~~~~  203 (708)
                      +|.+++...    ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++......   .....
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  160 (268)
T cd05086          81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD  160 (268)
T ss_pred             cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence            999999764    23567788899999999999999999999999999999999999999999997542211   12234


Q ss_pred             cccCCcccccccccCCcc------CCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-C-----CCCCCCCH
Q psy2648         204 FCGSPPYAAPELFQGKKY------DGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-Y-----RIPFYMST  270 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~------~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~-----~~p~~~s~  270 (708)
                      .+|++.|+|||++....+      .+.++|||||||++|+|++ |..||...+..+....+..+. .     .++...++
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (268)
T cd05086         161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSE  240 (268)
T ss_pred             CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcH
Confidence            678999999999853211      1468999999999999996 688998877777666655442 2     22334678


Q ss_pred             HHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         271 DCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       271 ~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .+.++|.+|| .||++||+++++.
T Consensus       241 ~~~~l~~~c~-~~P~~Rp~~~~i~  263 (268)
T cd05086         241 RWYEVLQFCW-LSPEKRATAEEVH  263 (268)
T ss_pred             HHHHHHHHHh-hCcccCCCHHHHH
Confidence            8999999999 6899999999875


No 358
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00  E-value=9.3e-38  Score=338.56  Aligned_cols=247  Identities=27%  Similarity=0.455  Sum_probs=202.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC------CE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE------KT  119 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------~~  119 (708)
                      ++|.+.+.||+|+||.||+|.+..+++.||||++.+..........+.+|+.+++.++||||+++++++...      ..
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            589999999999999999999999999999999976543333445678999999999999999999998754      35


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         120 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      +|+||||+.. +|..++  ...+++.++..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....  
T Consensus        95 ~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~--  169 (342)
T cd07879          95 FYLVMPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA--  169 (342)
T ss_pred             EEEEeccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC--
Confidence            7999999974 676654  34789999999999999999999999999999999999999999999999999875432  


Q ss_pred             CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-------------------
Q psy2648         200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG-------------------  260 (708)
Q Consensus       200 ~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~-------------------  260 (708)
                      ......+++.|+|||++.+....+.++|||||||++|+|++|+.||.+.+.......+...                   
T Consensus       170 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (342)
T cd07879         170 EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKS  249 (342)
T ss_pred             CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHH
Confidence            2334578899999999876433357899999999999999999999987654444333221                   


Q ss_pred             ----CCCCC--------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhh
Q psy2648         261 ----KYRIP--------FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       261 ----~~~~p--------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                          ....|        ...++++.+||.+||+.||.+||+++++.   |+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~  301 (342)
T cd07879         250 YIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFD  301 (342)
T ss_pred             HHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchh
Confidence                00001        13567899999999999999999999987   654


No 359
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00  E-value=9.8e-38  Score=330.94  Aligned_cols=246  Identities=30%  Similarity=0.508  Sum_probs=208.9

Q ss_pred             EEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          50 LLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        50 i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      ....||+|+||.||++.+..+++.||||.+....  ......+.+|+.+++.++||||+++++.+...+..|+||||+++
T Consensus        24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  101 (292)
T cd06657          24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG  101 (292)
T ss_pred             hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence            3467999999999999999999999999985432  23445688999999999999999999999999999999999999


Q ss_pred             CChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-CccccccCC
Q psy2648         130 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~~~Gt~  208 (708)
                      ++|.+++ ..+.+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++....... .....+|++
T Consensus       102 ~~L~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  180 (292)
T cd06657         102 GALTDIV-THTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTP  180 (292)
T ss_pred             CcHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCc
Confidence            9999876 45678999999999999999999999999999999999999999999999999886543221 223457899


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHHHHHhhhhCCC
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---RIPFYMSTDCENLLKKFLVLNPA  285 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~---~~p~~~s~~~~~Li~~~L~~dP~  285 (708)
                      .|+|||++.+..+ +.++|+|||||++|+|++|..||.+....+....+.....   ......++++.++|.+||..||.
T Consensus       181 ~y~~pE~~~~~~~-~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~  259 (292)
T cd06657         181 YWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPA  259 (292)
T ss_pred             cccCHHHhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcc
Confidence            9999999887666 4789999999999999999999998877666555544322   12335688999999999999999


Q ss_pred             CCCCHHHHh---hhhhC
Q psy2648         286 KRASLEVSG---EVTLG  299 (708)
Q Consensus       286 ~Rps~~~~~---~~~~~  299 (708)
                      +||+++++.   |+...
T Consensus       260 ~R~~~~~ll~~~~~~~~  276 (292)
T cd06657         260 QRATAAELLKHPFLAKA  276 (292)
T ss_pred             cCcCHHHHhcChHHhcc
Confidence            999999987   66543


No 360
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00  E-value=1e-37  Score=332.82  Aligned_cols=239  Identities=24%  Similarity=0.368  Sum_probs=194.7

Q ss_pred             CceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCChHHHHH
Q psy2648          58 NFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLV  137 (708)
Q Consensus        58 ~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg~L~~~i~  137 (708)
                      ++|.||++++..+++.||||++..........+.+.+|+++|+.++||||+++++++...+.+|++|||+++|+|.+++.
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~   91 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK   91 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence            45667777777899999999998765555667789999999999999999999999999999999999999999999987


Q ss_pred             Hc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC--------CccccccC
Q psy2648         138 LH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--------KLDTFCGS  207 (708)
Q Consensus       138 ~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~--------~~~~~~Gt  207 (708)
                      ..  ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||.+.......        ......++
T Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (314)
T cd08216          92 THFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKN  171 (314)
T ss_pred             HhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccccccccc
Confidence            64  468999999999999999999999999999999999999999999999999886543211        12344577


Q ss_pred             CcccccccccCC--ccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHcCCC----------------------
Q psy2648         208 PPYAAPELFQGK--KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLREL-RERVLRGKY----------------------  262 (708)
Q Consensus       208 ~~Y~APE~l~~~--~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l-~~~i~~~~~----------------------  262 (708)
                      ..|+|||++.+.  .+ +.++|||||||++|+|++|..||........ .+++.....                      
T Consensus       172 ~~y~aPE~~~~~~~~~-~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (314)
T cd08216         172 LPWLSPEVLQQNLQGY-NEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSN  250 (314)
T ss_pred             ccccCHHHhcCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccc
Confidence            889999998763  34 4789999999999999999999987654332 233221100                      


Q ss_pred             -----------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhh
Q psy2648         263 -----------RIPFYMSTDCENLLKKFLVLNPAKRASLEVSG---EVT  297 (708)
Q Consensus       263 -----------~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~  297 (708)
                                 ..+...+.++.+||.+||+.||++|||+++++   |+.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~  299 (314)
T cd08216         251 EHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFK  299 (314)
T ss_pred             cccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHh
Confidence                       00112346789999999999999999999987   654


No 361
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00  E-value=2.3e-37  Score=333.76  Aligned_cols=246  Identities=28%  Similarity=0.478  Sum_probs=202.1

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEe-CCEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIET-EKTLYLV  123 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~~ylV  123 (708)
                      .++|++.+.||+|+||.||+|.+..+++.||||++.+........+.+.+|+++++.++||||+++++++.. ...+|+|
T Consensus         9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv   88 (328)
T cd07856           9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFV   88 (328)
T ss_pred             ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEE
Confidence            468999999999999999999999999999999987654434445667899999999999999999999875 5679999


Q ss_pred             EeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccc
Q psy2648         124 MEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT  203 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~  203 (708)
                      |||+ +++|.+++. ...+++..+..++.||+.||.|||+++|+||||||.|||++.++.+||+|||++.....  ....
T Consensus        89 ~e~~-~~~L~~~~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~--~~~~  164 (328)
T cd07856          89 TELL-GTDLHRLLT-SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP--QMTG  164 (328)
T ss_pred             eehh-ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC--CcCC
Confidence            9998 568887764 45789999999999999999999999999999999999999999999999999875432  2344


Q ss_pred             cccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH---------------cC--------
Q psy2648         204 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVL---------------RG--------  260 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~---------------~~--------  260 (708)
                      ..+++.|+|||++.+....+.++|||||||++|+|++|..||...+.......+.               ..        
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (328)
T cd07856         165 YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQS  244 (328)
T ss_pred             CcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhh
Confidence            5788899999998663333589999999999999999999998765432211111               00        


Q ss_pred             ---CCCCC-----CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         261 ---KYRIP-----FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       261 ---~~~~p-----~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                         ....|     ...++++.++|++||+.||++||+++++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell  286 (328)
T cd07856         245 LPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEAL  286 (328)
T ss_pred             ccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence               00111     23578899999999999999999999887


No 362
>KOG0584|consensus
Probab=100.00  E-value=5.9e-39  Score=351.28  Aligned_cols=247  Identities=26%  Similarity=0.502  Sum_probs=216.4

Q ss_pred             ccCCe-EEEeEEcccCceEEEEEEEcCCCcEEEEEEeccC--CCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE-
Q psy2648          44 HIGKY-KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT--QLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT-  119 (708)
Q Consensus        44 ~~~~Y-~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~--~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~-  119 (708)
                      .-|+| +....||+|+|-+||+|.+..+|.+||--.++..  ...++.++++..|+.+|+.|+|||||++|++|.+... 
T Consensus        37 p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~  116 (632)
T KOG0584|consen   37 PTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNK  116 (632)
T ss_pred             CCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCc
Confidence            35677 5567999999999999999999999996444332  2356778999999999999999999999999987654 


Q ss_pred             -EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCCEEEcC-CCcEEEEeccCcccc
Q psy2648         120 -LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK--IIHRDLKAENLLLDS-EMNIKIADFGFSNEF  195 (708)
Q Consensus       120 -~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~g--IvHRDLKPeNILld~-~~~iKL~DFGls~~~  195 (708)
                       +.+|+|++..|+|..|+++.+++....++.|++||+.||.|||++.  |||||||.+||+|+. .|.|||.|+|||...
T Consensus       117 ~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~  196 (632)
T KOG0584|consen  117 TINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL  196 (632)
T ss_pred             eeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHh
Confidence             8999999999999999999999999999999999999999999985  999999999999985 489999999999876


Q ss_pred             CCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHcCCCCCC--CCCCHHH
Q psy2648         196 TPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-STLRELRERVLRGKYRIP--FYMSTDC  272 (708)
Q Consensus       196 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~-~~~~~l~~~i~~~~~~~p--~~~s~~~  272 (708)
                      .. .......|||.|||||++. ..|+ ..+||||||++|.||+|+.+||.. .+..+++++|..|..+--  .--.+++
T Consensus       197 r~-s~aksvIGTPEFMAPEmYE-E~Yn-E~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPev  273 (632)
T KOG0584|consen  197 RK-SHAKSVIGTPEFMAPEMYE-ENYN-ELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEV  273 (632)
T ss_pred             hc-cccceeccCccccChHHHh-hhcc-hhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHH
Confidence            54 3445589999999999997 5675 799999999999999999999975 678899999999976532  2346899


Q ss_pred             HHHHHHhhhhCCCCCCCHHHHh
Q psy2648         273 ENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       273 ~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ++||.+||.. ..+|+|+.+++
T Consensus       274 r~fIekCl~~-~~~R~sa~eLL  294 (632)
T KOG0584|consen  274 REFIEKCLAT-KSERLSAKELL  294 (632)
T ss_pred             HHHHHHHhcC-chhccCHHHHh
Confidence            9999999999 99999999887


No 363
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00  E-value=1.1e-37  Score=326.41  Aligned_cols=247  Identities=31%  Similarity=0.470  Sum_probs=204.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEc----CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEe--CCE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHV----PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIET--EKT  119 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~----~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~  119 (708)
                      ..|++.+.||+|+||.||+|.+.    .+++.||||++...... ...+.+.+|+++++.++||||+++++++..  ...
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~   82 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS   82 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence            46889999999999999999865    35889999999765433 345678899999999999999999999887  567


Q ss_pred             EEEEEeccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC
Q psy2648         120 LYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG  198 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~  198 (708)
                      .|+||||+++++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus        83 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  162 (284)
T cd05038          83 LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPED  162 (284)
T ss_pred             eEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccC
Confidence            999999999999999997654 6899999999999999999999999999999999999999999999999999766432


Q ss_pred             CCc----cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCH---------------HHHHHHHHc
Q psy2648         199 NKL----DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTL---------------RELRERVLR  259 (708)
Q Consensus       199 ~~~----~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~---------------~~l~~~i~~  259 (708)
                      ...    ....++..|+|||.+.+..++ .++|||||||++|+|++|..||.....               ..+...+..
T Consensus       163 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~-~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd05038         163 KDYYYVKEPGESPIFWYAPECLRTSKFS-SASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE  241 (284)
T ss_pred             CcceeccCCCCCcccccCcHHHccCCCC-cccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHc
Confidence            211    122345569999999877664 789999999999999999999876432               222233332


Q ss_pred             C-CCCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         260 G-KYRIPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       260 ~-~~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      + ....|...+.++.+|+.+||..||++||++.++.
T Consensus       242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~  277 (284)
T cd05038         242 GERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLI  277 (284)
T ss_pred             CCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHH
Confidence            2 2233456678999999999999999999999887


No 364
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00  E-value=6.2e-38  Score=324.96  Aligned_cols=246  Identities=30%  Similarity=0.525  Sum_probs=210.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCC---CChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQ---LNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~---~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      +|.+.+.||+|+||.||++.+..++..+++|+++...   ........+.+|+.+++.++||||+++++.+.+....|+|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            5999999999999999999999888888888776432   2233344577899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         124 MEYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       124 mEy~~gg~L~~~i~~----~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      |||+++++|.+++..    ...+++.+++.++.||+.||.|||++|++|+||||+||+++. +.+||+|||++.......
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~  159 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC  159 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence            999999999988864    356899999999999999999999999999999999999985 569999999987654332


Q ss_pred             -CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHH
Q psy2648         200 -KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIPFYMSTDCENLLK  277 (708)
Q Consensus       200 -~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~-~~p~~~s~~~~~Li~  277 (708)
                       ......|++.|+|||.+.+..++ .++|+||||+++|+|++|..||.+.+..++...+..+.. ..|...+.++.++|.
T Consensus       160 ~~~~~~~~~~~~~~pe~~~~~~~~-~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  238 (260)
T cd08222         160 DLATTFTGTPYYMSPEALKHQGYD-SKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQ  238 (260)
T ss_pred             ccccCCCCCcCccCHHHHccCCCC-chhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHH
Confidence             23356789999999999877765 689999999999999999999998877777777766643 356677899999999


Q ss_pred             HhhhhCCCCCCCHHHHh
Q psy2648         278 KFLVLNPAKRASLEVSG  294 (708)
Q Consensus       278 ~~L~~dP~~Rps~~~~~  294 (708)
                      +||..||++||+++++.
T Consensus       239 ~~l~~~p~~Rp~~~~il  255 (260)
T cd08222         239 SMLNKDPSLRPSAAEIL  255 (260)
T ss_pred             HHhcCChhhCcCHHHHh
Confidence            99999999999999887


No 365
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00  E-value=3.5e-37  Score=329.80  Aligned_cols=243  Identities=28%  Similarity=0.430  Sum_probs=205.4

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      .|...+.||+|+||.||+|++..+++.||||++..... .....+.+.+|+++++.++||||+++++++.+....|+|||
T Consensus        22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  101 (313)
T cd06633          22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME  101 (313)
T ss_pred             HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence            37778899999999999999999999999999976543 23445678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcccc
Q psy2648         126 YASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~  204 (708)
                      |+. |+|.+++... ..+++.++..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....   .....
T Consensus       102 ~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~---~~~~~  177 (313)
T cd06633         102 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS---PANSF  177 (313)
T ss_pred             cCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC---CCCCc
Confidence            996 5787777653 568999999999999999999999999999999999999999999999999986432   23456


Q ss_pred             ccCCcccccccccC---CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC-CC-CCCCCHHHHHHHHHh
Q psy2648         205 CGSPPYAAPELFQG---KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RI-PFYMSTDCENLLKKF  279 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~---~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~-~~-p~~~s~~~~~Li~~~  279 (708)
                      .|+..|+|||++..   ..+ ..++|||||||++|+|++|..||...+.......+..... .. ....+..+++||.+|
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~-~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  256 (313)
T cd06633         178 VGTPYWMAPEVILAMDEGQY-DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYC  256 (313)
T ss_pred             cccccccChhhccccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHH
Confidence            78999999999842   334 4689999999999999999999988776655555544332 22 224567899999999


Q ss_pred             hhhCCCCCCCHHHHh
Q psy2648         280 LVLNPAKRASLEVSG  294 (708)
Q Consensus       280 L~~dP~~Rps~~~~~  294 (708)
                      |+.+|.+||+++++.
T Consensus       257 l~~~P~~Rp~~~~~l  271 (313)
T cd06633         257 LQKIPQERPASAELL  271 (313)
T ss_pred             ccCChhhCcCHHHHh
Confidence            999999999999877


No 366
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=100.00  E-value=1e-37  Score=326.27  Aligned_cols=246  Identities=33%  Similarity=0.549  Sum_probs=207.3

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYA  127 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~  127 (708)
                      |++.+.||+|.||.||+|.+..+++.||+|++..........+.+..|+.+++.++||||+++++++.+...+|+||||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            67889999999999999999999999999999876533344566788999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Cccccc
Q psy2648         128 SGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFC  205 (708)
Q Consensus       128 ~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~~~  205 (708)
                      + ++|.+++... ..+++..+..++.||+.||+|||++||+||||+|+||++++++.+||+|||++....... ......
T Consensus        81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~  159 (282)
T cd07829          81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEV  159 (282)
T ss_pred             C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccc
Confidence            8 5899999876 579999999999999999999999999999999999999999999999999987654322 233456


Q ss_pred             cCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC------------------CCCCC--
Q psy2648         206 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG------------------KYRIP--  265 (708)
Q Consensus       206 Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~------------------~~~~p--  265 (708)
                      ++..|+|||.+.+....+.++|||||||++|+|++|..||.+.+..+...++...                  ...+|  
T Consensus       160 ~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (282)
T cd07829         160 VTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKF  239 (282)
T ss_pred             cCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccccc
Confidence            6788999999877633357899999999999999999999887765544443320                  00011  


Q ss_pred             ---------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         266 ---------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       266 ---------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                               ...+.++.++|.+||..||++||+++++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l  277 (282)
T cd07829         240 PPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEAL  277 (282)
T ss_pred             CccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHh
Confidence                     12367899999999999999999999876


No 367
>KOG1035|consensus
Probab=100.00  E-value=1.8e-38  Score=366.46  Aligned_cols=247  Identities=30%  Similarity=0.533  Sum_probs=202.6

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEE--------
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVI--------  114 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~--------  114 (708)
                      +...+|+.++.||+|+||.||+|+++.+|+.||||.|.... ......++++|+.+|.+|+|||||++|..|        
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~  554 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT  554 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence            34567899999999999999999999999999999998765 556667899999999999999999987310        


Q ss_pred             ----------------------------------------------------E------e--------------------
Q psy2648         115 ----------------------------------------------------E------T--------------------  116 (708)
Q Consensus       115 ----------------------------------------------------~------~--------------------  116 (708)
                                                                          .      .                    
T Consensus       555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS  634 (1351)
T KOG1035|consen  555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS  634 (1351)
T ss_pred             cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence                                                                0      0                    


Q ss_pred             -------------------------C--------CEEEEEEeccCCCChHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHH
Q psy2648         117 -------------------------E--------KTLYLVMEYASGGEVFDYLVLHGRM-KEKEARAKFRQIVSAVQYCH  162 (708)
Q Consensus       117 -------------------------~--------~~~ylVmEy~~gg~L~~~i~~~~~l-~e~~~~~i~~QI~~aL~yLH  162 (708)
                                               +        ..+||-||||+.-.|.++|..+... ...+++++|+||++||.|+|
T Consensus       635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH  714 (1351)
T KOG1035|consen  635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH  714 (1351)
T ss_pred             ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence                                     0        2379999999987777777655444 57889999999999999999


Q ss_pred             HCCceecCCCCCCEEEcCCCcEEEEeccCccccC-------------------CCCCccccccCCcccccccccCCc---
Q psy2648         163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-------------------PGNKLDTFCGSPPYAAPELFQGKK---  220 (708)
Q Consensus       163 ~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~-------------------~~~~~~~~~Gt~~Y~APE~l~~~~---  220 (708)
                      ++|||||||||.||+||.+++|||.|||+++...                   .....++..||..|+|||++.+..   
T Consensus       715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~  794 (1351)
T KOG1035|consen  715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK  794 (1351)
T ss_pred             hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence            9999999999999999999999999999997621                   011345678999999999998765   


Q ss_pred             cCCCchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         221 YDGPEVDVWSLGVILYTLVSGSLPFDG-STLRELRERVLRGKYRIPF----YMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       221 ~~~~~~DIWSlGvilyelltG~~Pf~~-~~~~~l~~~i~~~~~~~p~----~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      |+ .|+|+||||||||||+   .||.- +....+...+.++.++.|.    ..-+.-..+|+.||+.||.+|||+.+++
T Consensus       795 Yn-~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL  869 (1351)
T KOG1035|consen  795 YN-SKIDMYSLGIVLFEML---YPFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELL  869 (1351)
T ss_pred             cc-chhhhHHHHHHHHHHh---ccCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHh
Confidence            64 7999999999999997   47754 3344566777777776661    2335568999999999999999999876


No 368
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00  E-value=3.7e-37  Score=328.74  Aligned_cols=243  Identities=30%  Similarity=0.443  Sum_probs=206.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCC-ChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      .|...+.||+|+||.||+|++..+++.||||.+..... .....+.+.+|+++++.++||||+++++++......|+|||
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence            48889999999999999999999999999999875432 23445678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcccc
Q psy2648         126 YASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF  204 (708)
Q Consensus       126 y~~gg~L~~~i~~-~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~  204 (708)
                      |+. |+|.+++.. ...+++.++..++.||+.||.|||+++++||||||+|||++.++.+||+|||++......   ...
T Consensus        96 ~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~---~~~  171 (308)
T cd06634          96 YCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---NXF  171 (308)
T ss_pred             ccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc---ccc
Confidence            997 578777654 346899999999999999999999999999999999999999999999999998765432   345


Q ss_pred             ccCCcccccccccC---CccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHh
Q psy2648         205 CGSPPYAAPELFQG---KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR--IPFYMSTDCENLLKKF  279 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~---~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~--~p~~~s~~~~~Li~~~  279 (708)
                      .|++.|+|||++.+   ..+ ..++|||||||++|+|++|..||...+..+....+..+...  .+...+..+.+||++|
T Consensus       172 ~~~~~y~aPE~~~~~~~~~~-~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  250 (308)
T cd06634         172 VGTPYWMAPEVILAMDEGQY-DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC  250 (308)
T ss_pred             cCCccccCHHHHhhcccCCC-CcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHH
Confidence            78999999999853   233 46899999999999999999999887665555555544332  2335778899999999


Q ss_pred             hhhCCCCCCCHHHHh
Q psy2648         280 LVLNPAKRASLEVSG  294 (708)
Q Consensus       280 L~~dP~~Rps~~~~~  294 (708)
                      |..+|.+||+++++.
T Consensus       251 l~~~P~~Rp~~~~ll  265 (308)
T cd06634         251 LQKIPQDRPTSEVLL  265 (308)
T ss_pred             hhCCcccCCCHHHHh
Confidence            999999999999887


No 369
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00  E-value=1.9e-37  Score=318.35  Aligned_cols=221  Identities=26%  Similarity=0.376  Sum_probs=188.3

Q ss_pred             cCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCChHHHH
Q psy2648          57 GNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL  136 (708)
Q Consensus        57 G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg~L~~~i  136 (708)
                      |.||+||+|++..+++.||+|++.+..       ...+|...+....||||+++++++.....+|+||||+++|+|.+++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l   76 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI   76 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence            899999999999999999999997642       1234555566677999999999999999999999999999999999


Q ss_pred             HHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccccccCCcccccccc
Q psy2648         137 VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF  216 (708)
Q Consensus       137 ~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~~Gt~~Y~APE~l  216 (708)
                      .....+++.++..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......  .....++..|+|||++
T Consensus        77 ~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~y~aPE~~  154 (237)
T cd05576          77 SKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS--CDGEAVENMYCAPEVG  154 (237)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc--cccCCcCccccCCccc
Confidence            88888999999999999999999999999999999999999999999999999987655432  2345667889999999


Q ss_pred             cCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCCCHH
Q psy2648         217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRASLE  291 (708)
Q Consensus       217 ~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~  291 (708)
                      .+..+ ++++||||+||++|+|++|..||...... ..   ......+|...++++.+||.+||+.||++|+++.
T Consensus       155 ~~~~~-~~~~DvwslG~il~el~~g~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         155 GISEE-TEACDWWSLGAILFELLTGKTLVECHPSG-IN---THTTLNIPEWVSEEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             CCCCC-CchhhHHHHHHHHHHHHHCcchhhcCchh-cc---cccccCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence            87766 47899999999999999999998653221 10   0122456778899999999999999999999964


No 370
>KOG0590|consensus
Probab=100.00  E-value=1.1e-39  Score=374.42  Aligned_cols=459  Identities=29%  Similarity=0.451  Sum_probs=318.6

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEc-CCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHV-PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEKTLYL  122 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~-~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~yl  122 (708)
                      ...|.+.+.||+|+|+.|-++... .+...+|+|.+............+..|..+-+.+. |+|++++++........++
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            346999999999999999998764 44556888887765433344455667888888887 9999999999999999999


Q ss_pred             EEeccCCCChHHHH-HHcC-CCCHHHHHHHHHHHHHHHHHHH-HCCceecCCCCCCEEEcCCC-cEEEEeccCccccCC-
Q psy2648         123 VMEYASGGEVFDYL-VLHG-RMKEKEARAKFRQIVSAVQYCH-QKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTP-  197 (708)
Q Consensus       123 VmEy~~gg~L~~~i-~~~~-~l~e~~~~~i~~QI~~aL~yLH-~~gIvHRDLKPeNILld~~~-~iKL~DFGls~~~~~-  197 (708)
                      ++||..|+++++.+ .... .++...+..++.|+..++.|+| ..++.|||+||+|.+++..+ .+|++|||+|..+.. 
T Consensus        99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~  178 (601)
T KOG0590|consen   99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK  178 (601)
T ss_pred             ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence            99999999999988 5554 6888999999999999999999 99999999999999999999 999999999987755 


Q ss_pred             C---CCcccccc-CCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHHc-CC--CCCCCCC
Q psy2648         198 G---NKLDTFCG-SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLREL--RERVLR-GK--YRIPFYM  268 (708)
Q Consensus       198 ~---~~~~~~~G-t~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l--~~~i~~-~~--~~~p~~~  268 (708)
                      .   ......|| ++.|+|||.+.+..|.++..|+||+|+++..|++|..||.......-  ...+.. +.  ......+
T Consensus       179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (601)
T KOG0590|consen  179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSI  258 (601)
T ss_pred             CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccC
Confidence            2   23456789 99999999999988889999999999999999999999986543321  111111 11  1222357


Q ss_pred             CHHHHHHHHHhhhhCCCCCCCHHHHh---hhhh-CCCCcccCCCCCCCccCCCCCCCCCCccccccccchhhhhhhhhhh
Q psy2648         269 STDCENLLKKFLVLNPAKRASLEVSG---EVTL-GGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASIKENTARL  344 (708)
Q Consensus       269 s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  344 (708)
                      +....+++.++|..+|..|.+++++.   |+.. .....       ...       +.         .+..         
T Consensus       259 ~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~~~~~~~-------~~n-------~~---------~~~~---------  306 (601)
T KOG0590|consen  259 SDQAHDLLHKILKENPSNRLSIEELKLDNWLSSKRNGFS-------KSN-------PC---------ADSL---------  306 (601)
T ss_pred             ChhhhhcccccccCCchhccccccccccccccccccccc-------ccc-------cc---------cccc---------
Confidence            78899999999999999999998765   5433 00000       000       00         0000         


Q ss_pred             ccCCCCCCcCCCChhhHHHHhcCCCCHHHHHHHHhccCCCCcccccccccccccccCCCCCCCCCCCCCCCCCCcccccc
Q psy2648         345 NAGRPAKNTASIAPLDTKALVGLGYSRSEIEESLSQAKYDDPESDGSRSGSSLSLRNLQPGSGGGATGGSGSSRSWRNMQ  424 (708)
Q Consensus       345 ~~~~p~~~~~~~~~~~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~y~~l~~~~~~~~~~p~~~~~~~~~~g~s~~~~~~~  424 (708)
                         ..+..             ..++.          .+|-.             ..    +.-+.+..++......+...
T Consensus       307 ---~~~~~-------------~~~~~----------~~y~~-------------~~----~~~g~ga~g~~~~~~~~~~~  343 (601)
T KOG0590|consen  307 ---TIAKS-------------PIGFS----------EKYGK-------------PG----RVLGSGAYGSVRIAKRRSDL  343 (601)
T ss_pred             ---ccccC-------------ccccc----------cccCC-------------cc----ceeeecccCceEEEEecCCC
Confidence               00000             00000          00000             00    00000000000000000000


Q ss_pred             CCCCCccccCCCCCCCCCC--cCCCccccccccccccccCcccccccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHH
Q psy2648         425 PGSGGVATGGSGGGGGGGA--AQSPSHRGVHRSISASNAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDY  502 (708)
Q Consensus       425 ~~~~g~~~~~~~ggg~~g~--v~s~~hr~~~R~i~~~~~~~~~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~  502 (708)
                      +         ......+-.  ......+.....   ...+-.......|+|++.....+++....+-+||||++ ||+.+
T Consensus       344 ~---------~~~~~~~r~~~~~~~s~~~~~~~---i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~  410 (601)
T KOG0590|consen  344 K---------SFPEKEFRVRVKPTESERKYNYN---ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSL  410 (601)
T ss_pred             c---------cchhhhhhcccCCcccHHHHhhh---hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHH
Confidence            0         000000000  000000000000   11112223456788888777777777777777999999 99999


Q ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCCCEEEeeccCccccCCC-----CcccccccCCcc
Q psy2648         503 LVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-----NKLDTFCGSPPY  577 (708)
Q Consensus       503 l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~-----~~~~~~~Gt~~Y  577 (708)
                      +...+.+...++..++.|++.||+|+|+.||.||||||+|+|++..|.+||+|||.+..+...     .....++|+..|
T Consensus       411 ~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY  490 (601)
T KOG0590|consen  411 VMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPY  490 (601)
T ss_pred             HhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcC
Confidence            998889999999999999999999999999999999999999999999999999998765322     234668999999


Q ss_pred             cccccccCCCCccC
Q psy2648         578 AAPELFQGGAPVTS  591 (708)
Q Consensus       578 ~APEvl~g~~~~~~  591 (708)
                      +|||++.+..+-..
T Consensus       491 ~apE~~~~~~ydpr  504 (601)
T KOG0590|consen  491 LAPEVLTGKEYDPR  504 (601)
T ss_pred             cCcccccccccCcc
Confidence            99999987764433


No 371
>KOG4278|consensus
Probab=100.00  E-value=2.3e-37  Score=334.20  Aligned_cols=242  Identities=27%  Similarity=0.484  Sum_probs=213.9

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +-.+..+||-|.||.||.|.|+.-.-.||||.++.+.+   .++.|+.|+.+|+.+.|||+|+|+++|..+..+|||+||
T Consensus       268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM---eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEf  344 (1157)
T KOG4278|consen  268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEF  344 (1157)
T ss_pred             heeeeeccCCCcccceeeeeeeccceeeehhhhhhcch---hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEec
Confidence            34567899999999999999999999999999976654   467899999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcccc
Q psy2648         127 ASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF  204 (708)
Q Consensus       127 ~~gg~L~~~i~~~~~--l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~  204 (708)
                      |..|+|++||++..+  ++.-....++.||.+|++||..+++|||||...|+|+.++..|||+||||++.+..+. ....
T Consensus       345 M~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT-YTAH  423 (1157)
T KOG4278|consen  345 MCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT-YTAH  423 (1157)
T ss_pred             ccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc-eecc
Confidence            999999999987654  4555566777899999999999999999999999999999999999999999876543 2333


Q ss_pred             cc---CCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCCC--CCCCCCHHHHHHHHH
Q psy2648         205 CG---SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYR--IPFYMSTDCENLLKK  278 (708)
Q Consensus       205 ~G---t~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~~--~p~~~s~~~~~Li~~  278 (708)
                      .|   ...|.|||-+..+.+. .++|||+|||+|||+.| |-.||.+.+..+++..+.+| |+  -|..+++...+||..
T Consensus       424 AGAKFPIKWTAPEsLAyNtFS-iKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg-yRM~~PeGCPpkVYeLMra  501 (1157)
T KOG4278|consen  424 AGAKFPIKWTAPESLAYNTFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG-YRMDGPEGCPPKVYELMRA  501 (1157)
T ss_pred             cCccCcccccCcccccccccc-cchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc-ccccCCCCCCHHHHHHHHH
Confidence            34   3469999999988885 79999999999999998 99999999999999887766 54  588999999999999


Q ss_pred             hhhhCCCCCCCHHHHh
Q psy2648         279 FLVLNPAKRASLEVSG  294 (708)
Q Consensus       279 ~L~~dP~~Rps~~~~~  294 (708)
                      ||+++|.+||++.++.
T Consensus       502 CW~WsPsDRPsFaeiH  517 (1157)
T KOG4278|consen  502 CWNWSPSDRPSFAEIH  517 (1157)
T ss_pred             HhcCCcccCccHHHHH
Confidence            9999999999998764


No 372
>KOG4257|consensus
Probab=100.00  E-value=1.6e-37  Score=336.44  Aligned_cols=249  Identities=29%  Similarity=0.503  Sum_probs=215.5

Q ss_pred             CccCCeEEE-------eEEcccCceEEEEEEEcCC--Cc--EEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEE
Q psy2648          43 PHIGKYKLL-------KTIGKGNFAKVKLAKHVPT--GK--EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLF  111 (708)
Q Consensus        43 ~~~~~Y~i~-------~~LG~G~fg~V~la~~~~t--g~--~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~  111 (708)
                      |...+|++.       +.||.|.||.||.|.....  |+  -||||..+.+ ..++..++|+.|+-+|++++|||||+|+
T Consensus       379 P~~rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d-~t~d~tekflqEa~iMrnfdHphIikLI  457 (974)
T KOG4257|consen  379 PTVRNYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD-CTPDDTEKFLQEASIMRNFDHPHIIKLI  457 (974)
T ss_pred             CCCCcceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccC-CChhhHHHHHHHHHHHHhCCCcchhhee
Confidence            334466654       6789999999999986432  33  5888987653 4566788999999999999999999999


Q ss_pred             EEEEeCCEEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEecc
Q psy2648         112 QVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFG  190 (708)
Q Consensus       112 ~~~~~~~~~ylVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFG  190 (708)
                      +++.. ..+|||||+++-|+|..|+..+ ..++......|+.||+.||.|||+...|||||...|||+.....|||+|||
T Consensus       458 Gv~~e-~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFG  536 (974)
T KOG4257|consen  458 GVCVE-QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFG  536 (974)
T ss_pred             eeeec-cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccc
Confidence            99975 5699999999999999999876 468989999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCCCccccccCC--cccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCC
Q psy2648         191 FSNEFTPGNKLDTFCGSP--PYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPF  266 (708)
Q Consensus       191 ls~~~~~~~~~~~~~Gt~--~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~  266 (708)
                      |++.+..........|-+  .|||||.+.-..++ .++|||-|||++||++. |..||.+-...+++-+|.+|. .+.|.
T Consensus       537 LSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFT-tASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~  615 (974)
T KOG4257|consen  537 LSRYLEDDAYYKASRGKLPIKWMAPESINFRRFT-TASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPP  615 (974)
T ss_pred             hhhhccccchhhccccccceeecCccccchhccc-chhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCC
Confidence            999887665554445544  59999999888775 79999999999999987 999999988888888888884 57889


Q ss_pred             CCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         267 YMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       267 ~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .+++-+..|+.+||.+||.+||.+.++.
T Consensus       616 nCPp~LYslmskcWayeP~kRPrftei~  643 (974)
T KOG4257|consen  616 NCPPALYSLMSKCWAYEPSKRPRFTEIK  643 (974)
T ss_pred             CCChHHHHHHHHHhccCcccCCcHHHHH
Confidence            9999999999999999999999998776


No 373
>KOG1187|consensus
Probab=100.00  E-value=1.3e-36  Score=330.56  Aligned_cols=247  Identities=28%  Similarity=0.378  Sum_probs=197.8

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC-EEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK-TLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-~~ylVm  124 (708)
                      ++|.--..||+|+||.||+|.-.. |+.||||.+.......  .+.|.+|+.+|.+++|||+|+|+++|.+.+ +.+||.
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVY  151 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVY  151 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEE
Confidence            577778899999999999998754 4899999886544321  345999999999999999999999999888 599999


Q ss_pred             eccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCCCCEEEcCCCcEEEEeccCccccCC-C
Q psy2648         125 EYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKK---IIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-G  198 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~g---IvHRDLKPeNILld~~~~iKL~DFGls~~~~~-~  198 (708)
                      ||+++|+|.+++....  .+++..-..|+.+++.||+|||...   ||||||||.|||||++++.||+|||+|+.... .
T Consensus       152 Eym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~  231 (361)
T KOG1187|consen  152 EYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGD  231 (361)
T ss_pred             EccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccc
Confidence            9999999999997765  7899999999999999999999854   99999999999999999999999999976543 3


Q ss_pred             CCcccc-ccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCC---HHHHHH----HHHcCCC------CC
Q psy2648         199 NKLDTF-CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST---LRELRE----RVLRGKY------RI  264 (708)
Q Consensus       199 ~~~~~~-~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~---~~~l~~----~i~~~~~------~~  264 (708)
                      ....+. .||..|+|||++..... +.++|||||||+|.||++|+.|.+...   ...+..    .+..+.+      .+
T Consensus       232 ~~~~~~~~gt~gY~~PEy~~~g~l-t~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l  310 (361)
T KOG1187|consen  232 TSVSTTVMGTFGYLAPEYASTGKL-TEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRL  310 (361)
T ss_pred             cceeeecCCCCccCChhhhccCCc-CcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCc
Confidence            333333 89999999999976554 479999999999999999998887432   111222    2333321      11


Q ss_pred             C-CCCC--HH---HHHHHHHhhhhCCCCCCCHHHHhhh
Q psy2648         265 P-FYMS--TD---CENLLKKFLVLNPAKRASLEVSGEV  296 (708)
Q Consensus       265 p-~~~s--~~---~~~Li~~~L~~dP~~Rps~~~~~~~  296 (708)
                      . ....  .+   +..+..+|++.+|.+||++.++.+.
T Consensus       311 ~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~  348 (361)
T KOG1187|consen  311 KEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKE  348 (361)
T ss_pred             cCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHH
Confidence            1 1112  12   4566779999999999999987644


No 374
>KOG0196|consensus
Probab=100.00  E-value=1.7e-37  Score=344.19  Aligned_cols=250  Identities=27%  Similarity=0.472  Sum_probs=220.0

Q ss_pred             CCccCCeEEEeEEcccCceEEEEEEEcCCCc---EEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC
Q psy2648          42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGK---EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK  118 (708)
Q Consensus        42 ~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~---~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~  118 (708)
                      +.....-+|.++||.|.||+|++|+.+..|+   .||||.++.. ...+....|+.|+.||-+++|||||+|-++....+
T Consensus       625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~  703 (996)
T KOG0196|consen  625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSK  703 (996)
T ss_pred             hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCc
Confidence            3444556899999999999999999987774   6999999643 34556678999999999999999999999999999


Q ss_pred             EEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC
Q psy2648         119 TLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP  197 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~  197 (708)
                      .+-||+|||++|+|+.||+.+ +.|...+...+++.|+.||+||-++|+|||||...|||++.+-.+|++||||++.+.+
T Consensus       704 PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvled  783 (996)
T KOG0196|consen  704 PVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED  783 (996)
T ss_pred             eeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeeccc
Confidence            999999999999999999877 6788899999999999999999999999999999999999999999999999997754


Q ss_pred             CCC--ccccccC--CcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCCCCC--CCCCH
Q psy2648         198 GNK--LDTFCGS--PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP--FYMST  270 (708)
Q Consensus       198 ~~~--~~~~~Gt--~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~~~p--~~~s~  270 (708)
                      +..  ..+.-|.  ..|.|||.+...+++ .++||||+||+|||.++ |..||.+.+.+++++.|..| |++|  -.++.
T Consensus       784 d~~~~ytt~GGKIPiRWTAPEAIa~RKFT-sASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~g-yRLPpPmDCP~  861 (996)
T KOG0196|consen  784 DPEAAYTTLGGKIPIRWTAPEAIAYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQG-YRLPPPMDCPA  861 (996)
T ss_pred             CCCccccccCCccceeecChhHhhhcccC-chhhccccceEEEEecccCCCcccccchHHHHHHHHhc-cCCCCCCCCcH
Confidence            431  2233333  469999999999885 79999999999999887 99999999999999999877 6654  46778


Q ss_pred             HHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         271 DCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       271 ~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .+..|+..||++|-.+||.+++|.
T Consensus       862 aL~qLMldCWqkdR~~RP~F~qiV  885 (996)
T KOG0196|consen  862 ALYQLMLDCWQKDRNRRPKFAQIV  885 (996)
T ss_pred             HHHHHHHHHHHHHhhcCCCHHHHH
Confidence            899999999999999999999987


No 375
>KOG0199|consensus
Probab=100.00  E-value=2e-37  Score=339.33  Aligned_cols=246  Identities=29%  Similarity=0.492  Sum_probs=216.1

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCC-Cc--EEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPT-GK--EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYL  122 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~t-g~--~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~yl  122 (708)
                      ++.++.+.||+|+||.|++|.|... |+  .||||++.....+. ....|++|+.+|.+|+|||+|+||++..+ ..+-|
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mM  187 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMM  187 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhH
Confidence            3566778999999999999998743 33  59999998776554 56789999999999999999999999987 67899


Q ss_pred             EEeccCCCChHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q psy2648         123 VMEYASGGEVFDYLVL--HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK  200 (708)
Q Consensus       123 VmEy~~gg~L~~~i~~--~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~  200 (708)
                      |||+|+.|+|.+.|.+  ++.|.......|+.||+.||.||.++++|||||...||||.....|||+||||.+.+..+..
T Consensus       188 V~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned  267 (1039)
T KOG0199|consen  188 VFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED  267 (1039)
T ss_pred             HhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence            9999999999999987  35688888999999999999999999999999999999999999999999999988766554


Q ss_pred             cccccc----CCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHH
Q psy2648         201 LDTFCG----SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCEN  274 (708)
Q Consensus       201 ~~~~~G----t~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~  274 (708)
                      ...+.+    -..|.|||.+...+++ .++|||++||+||||++ |+.||.|..-.++.++|-.+. ..-|..+++++.+
T Consensus       268 ~Yvm~p~rkvPfAWCaPEsLrh~kFS-haSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~csedIY~  346 (1039)
T KOG0199|consen  268 MYVMAPQRKVPFAWCAPESLRHRKFS-HASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYCSEDIYQ  346 (1039)
T ss_pred             ceEecCCCcCcccccCHhHhcccccc-ccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCChHHHHH
Confidence            433332    3469999999999886 69999999999999998 999999999999999998664 4568899999999


Q ss_pred             HHHHhhhhCCCCCCCHHHHh
Q psy2648         275 LLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       275 Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ++++||..+|++|||+..|.
T Consensus       347 imk~cWah~paDRptFsair  366 (1039)
T KOG0199|consen  347 IMKNCWAHNPADRPTFSAIR  366 (1039)
T ss_pred             HHHHhccCCccccccHHHHH
Confidence            99999999999999998774


No 376
>KOG0662|consensus
Probab=100.00  E-value=5.5e-37  Score=288.87  Aligned_cols=247  Identities=30%  Similarity=0.540  Sum_probs=208.7

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      +|.-.++||+|.||+||+|+++.+++.||+|.+.-+..+...-...++|+.+|+.|.|.|||+++++...++.+-+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            57778899999999999999999999999999976654444456789999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC-Ccccc
Q psy2648         127 ASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTF  204 (708)
Q Consensus       127 ~~gg~L~~~i~~-~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~-~~~~~  204 (708)
                      |.. +|..|... +|.++.+.++.++.|++.||.|||++++.||||||.|+||+.+|.+||+|||+++.+.-.- -...-
T Consensus        83 cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysae  161 (292)
T KOG0662|consen   83 CDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE  161 (292)
T ss_pred             hhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeece
Confidence            964 77777654 5789999999999999999999999999999999999999999999999999998875432 22334


Q ss_pred             ccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHc--CC-----C----------CCCC
Q psy2648         205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLR--GK-----Y----------RIPF  266 (708)
Q Consensus       205 ~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~--~~-----~----------~~p~  266 (708)
                      .-|..|.+|.++.|.+......|+||-|||+.|+.. |++-|.+.+..+-..+|..  |.     +          .+|.
T Consensus       162 vvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~  241 (292)
T KOG0662|consen  162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPI  241 (292)
T ss_pred             eeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCC
Confidence            568899999999987766688999999999999997 8999999988776666643  11     1          0111


Q ss_pred             ------------CCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         267 ------------YMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       267 ------------~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                  .++..-+||++++|.-+|.+|++++..+
T Consensus       242 ypattswsqivp~lns~grdllqkll~cnp~qrisaeaal  281 (292)
T KOG0662|consen  242 YPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAAL  281 (292)
T ss_pred             ccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHh
Confidence                        1233468999999999999999998755


No 377
>KOG0666|consensus
Probab=100.00  E-value=2e-37  Score=313.41  Aligned_cols=250  Identities=29%  Similarity=0.513  Sum_probs=201.7

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCC----cEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEe-CCE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTG----KEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIET-EKT  119 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg----~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~  119 (708)
                      +..|++++.||+|.||.||+|....+.    +.+|||.++-+...........||+.+++.|+|||||.|..+|-. +..
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            567999999999999999999655443    379999997664433444667899999999999999999999877 788


Q ss_pred             EEEEEeccCCCChHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCC----CcEEEEecc
Q psy2648         120 LYLVMEYASGGEVFDYLVLH-----GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE----MNIKIADFG  190 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~-----~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~----~~iKL~DFG  190 (708)
                      +|+++||++. ||.+.|..+     ..++...++.++.||+.|+.|||++=|+||||||.|||+..+    |.|||+|||
T Consensus       103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG  181 (438)
T KOG0666|consen  103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG  181 (438)
T ss_pred             EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence            9999999986 898887654     248889999999999999999999999999999999999877    899999999


Q ss_pred             CccccCCC----CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHH---------HHHHHH
Q psy2648         191 FSNEFTPG----NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLR---------ELRERV  257 (708)
Q Consensus       191 ls~~~~~~----~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~---------~l~~~i  257 (708)
                      |++.+...    ...+..+-|..|.|||++.|....+++.||||+|||+.||++-++-|.+...+         +-..+|
T Consensus       182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI  261 (438)
T KOG0666|consen  182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI  261 (438)
T ss_pred             HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence            99887532    23345677899999999999877679999999999999999999888763210         111222


Q ss_pred             Hc--CCC---------CCCC--------------------------CCCHHHHHHHHHhhhhCCCCCCCHHHHhh
Q psy2648         258 LR--GKY---------RIPF--------------------------YMSTDCENLLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       258 ~~--~~~---------~~p~--------------------------~~s~~~~~Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      .+  |.+         .+|.                          ..++...+|+.+||++||.+|+|++++++
T Consensus       262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle  336 (438)
T KOG0666|consen  262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE  336 (438)
T ss_pred             HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence            11  100         1121                          13455889999999999999999998873


No 378
>KOG1151|consensus
Probab=100.00  E-value=3.9e-37  Score=322.28  Aligned_cols=250  Identities=32%  Similarity=0.491  Sum_probs=206.0

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCCh-----hhHHHHHHHHHHHHhCCCCCeeeEEEEEEe-CC
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP-----GSLQKLFREVRIMKMLDHPNIVKLFQVIET-EK  118 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~  118 (708)
                      -++|-++..||+|+|++||+|.+....+.||||+-.-.+...     ...+...+|.+|.+.|+||-||++|++|.- .+
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd  541 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD  541 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence            358999999999999999999999999999999965433211     223457799999999999999999999964 46


Q ss_pred             EEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--CceecCCCCCCEEEcC---CCcEEEEeccCcc
Q psy2648         119 TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK--KIIHRDLKAENLLLDS---EMNIKIADFGFSN  193 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~--gIvHRDLKPeNILld~---~~~iKL~DFGls~  193 (708)
                      .+|-|+|||+|.||..||+.+..++|.+|+.|+.||+.||.||...  -|||-||||.||||-+   .|.|||+||||++
T Consensus       542 sFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSK  621 (775)
T KOG1151|consen  542 SFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSK  621 (775)
T ss_pred             cceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhh
Confidence            7999999999999999999999999999999999999999999976  5999999999999954   4789999999999


Q ss_pred             ccCCCCC--------ccccccCCcccccccccCC---ccCCCchhHHHHHHHHHHHHcCCCCCCCC-CHHHHHH--HHHc
Q psy2648         194 EFTPGNK--------LDTFCGSPPYAAPELFQGK---KYDGPEVDVWSLGVILYTLVSGSLPFDGS-TLRELRE--RVLR  259 (708)
Q Consensus       194 ~~~~~~~--------~~~~~Gt~~Y~APE~l~~~---~~~~~~~DIWSlGvilyelltG~~Pf~~~-~~~~l~~--~i~~  259 (708)
                      .+...+.        +....||..|++||.|.-.   +-...++||||+|||+|..+.|+-||... +.+++.+  -|++
T Consensus       622 IMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlk  701 (775)
T KOG1151|consen  622 IMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILK  701 (775)
T ss_pred             hccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhc
Confidence            8764321        2457899999999998432   22346899999999999999999999753 3333332  2222


Q ss_pred             -CCCCCC--CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         260 -GKYRIP--FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       260 -~~~~~p--~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                       ....+|  .-++.++++||++||++.-++|..+.++.
T Consensus       702 AtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  702 ATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             ceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence             234455  35899999999999999999999887765


No 379
>KOG0669|consensus
Probab=100.00  E-value=4.7e-38  Score=309.88  Aligned_cols=249  Identities=30%  Similarity=0.536  Sum_probs=205.4

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeC-------
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE-------  117 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-------  117 (708)
                      .+.|+-+..||+|.||+||+|+++.+|+.||+|++-.+......-...++|+++|..|.|+|++.++++|.+.       
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~   95 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD   95 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence            5679899999999999999999999999999987654332223334568999999999999999998877532       


Q ss_pred             -CEEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCcccc
Q psy2648         118 -KTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF  195 (708)
Q Consensus       118 -~~~ylVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~  195 (708)
                       ..+|+||.+|+. ||+-.+... -+++..+++.++.+++.||.|+|.+.|+|||+||+|+||+.+|.+||+|||+++.+
T Consensus        96 r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~f  174 (376)
T KOG0669|consen   96 RATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAF  174 (376)
T ss_pred             cceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence             359999999986 888877654 57999999999999999999999999999999999999999999999999999876


Q ss_pred             CCCC-----CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc--CC-------
Q psy2648         196 TPGN-----KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR--GK-------  261 (708)
Q Consensus       196 ~~~~-----~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~--~~-------  261 (708)
                      ....     .....+-|+.|.+||.+.|....+++.|||.-|||+.||.+|.+-|.+.+.++-...|..  |.       
T Consensus       175 s~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP  254 (376)
T KOG0669|consen  175 STSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWP  254 (376)
T ss_pred             ecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCC
Confidence            4322     233456699999999999987778999999999999999999999998776554443321  11       


Q ss_pred             --------------------CC------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         262 --------------------YR------IPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       262 --------------------~~------~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                          ++      -|.-..+++.|||.+||..||.+|+..+++.
T Consensus       255 ~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~al  313 (376)
T KOG0669|consen  255 NVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQAL  313 (376)
T ss_pred             CcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhh
Confidence                                10      1222355889999999999999999999877


No 380
>KOG1094|consensus
Probab=100.00  E-value=6e-36  Score=322.85  Aligned_cols=245  Identities=27%  Similarity=0.430  Sum_probs=206.8

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEY  126 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy  126 (708)
                      ...+.++||+|.||+|.+|.-.. +.+||||+++... +......|.+|+++|.+|+|||||+|+++|..++.+++||||
T Consensus       539 ~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a-~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY  616 (807)
T KOG1094|consen  539 RLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDA-TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY  616 (807)
T ss_pred             heehhhhhcCcccceeEEEEecC-ceEEEEeecCccc-chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence            56788999999999999998643 6899999997654 233456799999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcc--
Q psy2648         127 ASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD--  202 (708)
Q Consensus       127 ~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~--  202 (708)
                      +++|+|.+|+.++.  .+.......++.||++||+||.+.++|||||.+.|+|+|.++++||+|||+++.+-.+....  
T Consensus       617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vq  696 (807)
T KOG1094|consen  617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQ  696 (807)
T ss_pred             HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeee
Confidence            99999999999873  34556677899999999999999999999999999999999999999999998654443222  


Q ss_pred             -ccccCCcccccccccCCccCCCchhHHHHHHHHHHHH--cCCCCCCCCCHHHHHHHHH---cCC-----CCCCCCCCHH
Q psy2648         203 -TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV--SGSLPFDGSTLRELRERVL---RGK-----YRIPFYMSTD  271 (708)
Q Consensus       203 -~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyell--tG~~Pf~~~~~~~l~~~i~---~~~-----~~~p~~~s~~  271 (708)
                       ...-...|||||.+.-.+++ .++|+|+|||+|||++  |...||...+.+++.+...   .+.     ...|.-++..
T Consensus       697 gr~vlpiRwmawEsillgkFt-taSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~  775 (807)
T KOG1094|consen  697 GRAVLPIRWMAWESILLGKFT-TASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQG  775 (807)
T ss_pred             cceeeeeeehhHHHHHhcccc-chhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHH
Confidence             12334689999999888885 7999999999999976  5889999888777665432   221     2356778889


Q ss_pred             HHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         272 CENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       272 ~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +.+||-+||..|-.+||+++++.
T Consensus       776 lyelml~Cw~~es~~RPsFe~lh  798 (807)
T KOG1094|consen  776 LYELMLRCWRRESEQRPSFEQLH  798 (807)
T ss_pred             HHHHHHHHhchhhhcCCCHHHHH
Confidence            99999999999999999999876


No 381
>KOG0576|consensus
Probab=100.00  E-value=2.7e-37  Score=337.94  Aligned_cols=383  Identities=27%  Similarity=0.418  Sum_probs=291.4

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      -++|+++..+|.|+||.||+|+++.+++..|||+++-..-  .+..-+..|+-+++.-+|||||.+++.+-....+||+|
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~--dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG--DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccCC--ccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            3579999999999999999999999999999999976532  34455778999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-CCccc
Q psy2648         125 EYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDT  203 (708)
Q Consensus       125 Ey~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-~~~~~  203 (708)
                      |||.||+|.+--.-.+.++|.++....++.+.||+|||++|=+|||||-.|||+++.|.+|++|||.+..+... .+-..
T Consensus        92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krks  171 (829)
T KOG0576|consen   92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS  171 (829)
T ss_pred             EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhc
Confidence            99999999987666789999999999999999999999999999999999999999999999999998766432 24467


Q ss_pred             cccCCccccccccc---CCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCC-----CCCCHHHHHH
Q psy2648         204 FCGSPPYAAPELFQ---GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP-----FYMSTDCENL  275 (708)
Q Consensus       204 ~~Gt~~Y~APE~l~---~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p-----~~~s~~~~~L  275 (708)
                      +.|||.|||||+-.   ...| ...+|||++|+...|+-.-+.|-.+...........+..|..|     ...++-+.+|
T Consensus       172 fiGtpywmapEvaaverkggy-nqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~f  250 (829)
T KOG0576|consen  172 FIGTPYWMAPEVAAVERKGGY-NQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNF  250 (829)
T ss_pred             ccCCccccchhHHHHHhcccc-cccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHH
Confidence            89999999999863   2334 4789999999999999998988776666655555555555554     3467889999


Q ss_pred             HHHhhhhCCCCCCCHHHHhhhhhCCCCcccCCCCCCCccCCCCCCCCCCccccccccchhhhhhhhhhhccCCCCCCcCC
Q psy2648         276 LKKFLVLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASIKENTARLNAGRPAKNTAS  355 (708)
Q Consensus       276 i~~~L~~dP~~Rps~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  355 (708)
                      ++.+|.++|++||+.+.++-.     +               ....        . .                       
T Consensus       251 vK~altknpKkRptaeklL~h-----~---------------fvs~--------~-l-----------------------  278 (829)
T KOG0576|consen  251 VKGALTKNPKKRPTAEKLLQH-----P---------------FVSQ--------T-L-----------------------  278 (829)
T ss_pred             HHHHhcCCCccCCChhhheec-----e---------------eecc--------c-h-----------------------
Confidence            999999999999998843211     0               0000        0 0                       


Q ss_pred             CChhhHHHHhcCCCCHHHHHHHHhccCCCCcccccccccccccccCCCCCCCCCCCCCCCCCCccccccCCCCCccccCC
Q psy2648         356 IAPLDTKALVGLGYSRSEIEESLSQAKYDDPESDGSRSGSSLSLRNLQPGSGGGATGGSGSSRSWRNMQPGSGGVATGGS  435 (708)
Q Consensus       356 ~~~~~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~y~~l~~~~~~~~~~p~~~~~~~~~~g~s~~~~~~~~~~~g~~~~~~  435 (708)
                                    ++.-.++.|.  +.|++..                                               
T Consensus       279 --------------~~rl~~eLLd--K~n~P~~-----------------------------------------------  295 (829)
T KOG0576|consen  279 --------------SRRLAIELLD--KVNNPNP-----------------------------------------------  295 (829)
T ss_pred             --------------hhHHHHHHHH--HccCCCC-----------------------------------------------
Confidence                          0000111111  1222111                                               


Q ss_pred             CCCCCCCCcCCCccccccccccccccCcccccccccCceeEEEEEEEeCCEEEEEEeccCCC-C-HHHHHHhcCCCCHHH
Q psy2648         436 GGGGGGGAAQSPSHRGVHRSISASNAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGG-E-VFDYLVLHGRMKEKE  513 (708)
Q Consensus       436 ~ggg~~g~v~s~~hr~~~R~i~~~~~~~~~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg-~-L~~~l~~~~~l~e~~  513 (708)
                                                            .|..++-++.++..+++|++|.++ + ....-...-.+.+-+
T Consensus       296 --------------------------------------~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~  337 (829)
T KOG0576|consen  296 --------------------------------------VVRYLEDYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQ  337 (829)
T ss_pred             --------------------------------------cccccccCCcccccchhhhhhcCCccccccCChhhHhhhhhh
Confidence                                                  122233345566788889998877 2 111111111233344


Q ss_pred             HHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCCCEEEeeccCccccCCCCcccccccCCcccccccccCCCC
Q psy2648         514 ARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAP  588 (708)
Q Consensus       514 ~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~  588 (708)
                      .....+.-..++.++|+..=+|||    |||..+ +..|..||+....+.......++.+|+.++|||++++...
T Consensus       338 ~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~  407 (829)
T KOG0576|consen  338 FAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTI  407 (829)
T ss_pred             hhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCcccccccCCCCCCCCCchhhccccc
Confidence            445566777889999998889999    777655 7889999999988877666778899999999999876653


No 382
>KOG1152|consensus
Probab=100.00  E-value=1.1e-36  Score=328.30  Aligned_cols=204  Identities=36%  Similarity=0.650  Sum_probs=184.4

Q ss_pred             CccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCCh------hhHHHHHHHHHHHHhCC---CCCeeeEEEE
Q psy2648          43 PHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP------GSLQKLFREVRIMKMLD---HPNIVKLFQV  113 (708)
Q Consensus        43 ~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~------~~~~~~~~Ei~il~~l~---HpnIv~l~~~  113 (708)
                      ..+..|..++.+|+|+||+|++|.|+.....|+||.|.|++.-.      ..+-.+-.||+||..|+   |+||++++++
T Consensus       558 ~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf  637 (772)
T KOG1152|consen  558 KKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF  637 (772)
T ss_pred             cccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence            34567999999999999999999999999999999999876421      12223557999999998   9999999999


Q ss_pred             EEeCCEEEEEEec-cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCc
Q psy2648         114 IETEKTLYLVMEY-ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS  192 (708)
Q Consensus       114 ~~~~~~~ylVmEy-~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls  192 (708)
                      ||+++++||+||- =+|-||++||..+.+++|.++..+|+|++.|+++||++||||||||-||+.+|.+|.+||+|||.+
T Consensus       638 FEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsa  717 (772)
T KOG1152|consen  638 FEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSA  717 (772)
T ss_pred             eecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccch
Confidence            9999999999995 477899999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCC
Q psy2648         193 NEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG  247 (708)
Q Consensus       193 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~  247 (708)
                      ... ......++.||..|+|||++.|.+|-|..-|||+|||+||.++...-||..
T Consensus       718 a~~-ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  718 AYT-KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             hhh-cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            644 345678999999999999999999999999999999999999999999864


No 383
>KOG0671|consensus
Probab=100.00  E-value=2.8e-36  Score=313.42  Aligned_cols=244  Identities=28%  Similarity=0.458  Sum_probs=200.6

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCC--CC----eeeEEEEEEeCC
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH--PN----IVKLFQVIETEK  118 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~H--pn----Iv~l~~~~~~~~  118 (708)
                      ..+|++.+++|+|.||+|-.|.+..++..||||+|+.-   .+..+..+-|+++|++|++  |+    +|++.++|+-.+
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg  164 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG  164 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence            46899999999999999999999999999999998632   2344567789999999953  32    788999999999


Q ss_pred             EEEEEEeccCCCChHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcC----------------
Q psy2648         119 TLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS----------------  180 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~~--~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~----------------  180 (708)
                      +++||+|.+ |-++++|+..++  +++...++.+.+||+.+++|||+.+++|-||||||||+-+                
T Consensus       165 hiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~  243 (415)
T KOG0671|consen  165 HICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFI  243 (415)
T ss_pred             ceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCcccee
Confidence            999999987 568999998764  6889999999999999999999999999999999999832                


Q ss_pred             ----CCcEEEEeccCccccCCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHH---H
Q psy2648         181 ----EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRE---L  253 (708)
Q Consensus       181 ----~~~iKL~DFGls~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~---l  253 (708)
                          +-.|||+|||.+.......  .+.+.|..|.|||++.+..++ .++||||+||||+|+++|..-|+..+..|   +
T Consensus       244 r~~ks~~I~vIDFGsAtf~~e~h--s~iVsTRHYRAPEViLgLGwS-~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaM  320 (415)
T KOG0671|consen  244 RPLKSTAIKVIDFGSATFDHEHH--STIVSTRHYRAPEVILGLGWS-QPCDVWSIGCILVELYTGETLFQTHENLEHLAM  320 (415)
T ss_pred             ccCCCcceEEEecCCcceeccCc--ceeeeccccCCchheeccCcC-CccCceeeeeEEEEeeccceecccCCcHHHHHH
Confidence                2358999999887544333  677899999999999999986 68999999999999999999998765444   5


Q ss_pred             HHHHHc------------------CCCCCCC----------------------CCC---HHHHHHHHHhhhhCCCCCCCH
Q psy2648         254 RERVLR------------------GKYRIPF----------------------YMS---TDCENLLKKFLVLNPAKRASL  290 (708)
Q Consensus       254 ~~~i~~------------------~~~~~p~----------------------~~s---~~~~~Li~~~L~~dP~~Rps~  290 (708)
                      .++|+.                  +....|.                      ..+   .++.|||++||..||.+|+|+
T Consensus       321 MerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl  400 (415)
T KOG0671|consen  321 MERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITL  400 (415)
T ss_pred             HHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccH
Confidence            555542                  1111111                      011   246799999999999999999


Q ss_pred             HHHhh
Q psy2648         291 EVSGE  295 (708)
Q Consensus       291 ~~~~~  295 (708)
                      .+++|
T Consensus       401 ~EAL~  405 (415)
T KOG0671|consen  401 REALS  405 (415)
T ss_pred             HHHhc
Confidence            99884


No 384
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00  E-value=2.1e-34  Score=291.91  Aligned_cols=235  Identities=49%  Similarity=0.821  Sum_probs=207.3

Q ss_pred             CceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCChHHHHH
Q psy2648          58 NFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLV  137 (708)
Q Consensus        58 ~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg~L~~~i~  137 (708)
                      +||.||+|.+..+++.||+|++........ .+.+.+|+++++.++|+||+++++.+......+++|||+.+++|.+++.
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~   79 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK   79 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence            589999999999999999999976543221 5678899999999999999999999999999999999999999999998


Q ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccccccCCccccccccc
Q psy2648         138 LHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ  217 (708)
Q Consensus       138 ~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~~Gt~~Y~APE~l~  217 (708)
                      ....+++..+..++.|++.+|.|||+.+|+|+||+|.||+++.++.++|+|||++.............++..|++||.+.
T Consensus        80 ~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~  159 (244)
T smart00220       80 KRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLL  159 (244)
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHc
Confidence            77668999999999999999999999999999999999999999999999999988765544556678899999999998


Q ss_pred             CCccCCCchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHcCCCCCCCC---CCHHHHHHHHHhhhhCCCCCCCHHHH
Q psy2648         218 GKKYDGPEVDVWSLGVILYTLVSGSLPFDG-STLRELRERVLRGKYRIPFY---MSTDCENLLKKFLVLNPAKRASLEVS  293 (708)
Q Consensus       218 ~~~~~~~~~DIWSlGvilyelltG~~Pf~~-~~~~~l~~~i~~~~~~~p~~---~s~~~~~Li~~~L~~dP~~Rps~~~~  293 (708)
                      +..++ +++||||||+++|+|++|..||.. .+...+.+.+..+....+..   ++.++.+++.+||..||++||++.++
T Consensus       160 ~~~~~-~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~  238 (244)
T smart00220      160 GKGYG-KAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEA  238 (244)
T ss_pred             cCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHH
Confidence            77765 699999999999999999999988 66677777776665554333   78899999999999999999999987


Q ss_pred             h
Q psy2648         294 G  294 (708)
Q Consensus       294 ~  294 (708)
                      .
T Consensus       239 ~  239 (244)
T smart00220      239 L  239 (244)
T ss_pred             h
Confidence            6


No 385
>KOG1006|consensus
Probab=100.00  E-value=8.3e-37  Score=303.38  Aligned_cols=246  Identities=29%  Similarity=0.447  Sum_probs=200.4

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHH-HhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIM-KMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il-~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      +.+-+..||.|+||.|++-.|+++|+..|||.|..... ..+.++++.|.+.. +.-+.||||++|+.+-.++..||.||
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME  143 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME  143 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence            34556789999999999999999999999999987654 34566788888764 55679999999999999999999999


Q ss_pred             ccCCCChHHHH-----HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         126 YASGGEVFDYL-----VLHGRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       126 y~~gg~L~~~i-----~~~~~l~e~~~~~i~~QI~~aL~yLH~-~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      ++.- +|..+.     ..+.+++|.-.-.+....+.||+||-. ..|||||+||+|||||..|.|||||||++..+...-
T Consensus       144 LMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si  222 (361)
T KOG1006|consen  144 LMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI  222 (361)
T ss_pred             HHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHH
Confidence            9953 444332     345679998888888889999999975 589999999999999999999999999987664433


Q ss_pred             CccccccCCcccccccccC--CccCCCchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHcCCCCC---C---CCCCH
Q psy2648         200 KLDTFCGSPPYAAPELFQG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGST-LRELRERVLRGKYRI---P---FYMST  270 (708)
Q Consensus       200 ~~~~~~Gt~~Y~APE~l~~--~~~~~~~~DIWSlGvilyelltG~~Pf~~~~-~~~l~~~i~~~~~~~---p---~~~s~  270 (708)
                      ....-.|..+|||||.+..  ..|+ .++||||||++|||+.||.+||.+.+ ..+-...|..|.+++   +   .+.|.
T Consensus       223 AkT~daGCrpYmAPERi~p~~~gyD-iRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~  301 (361)
T KOG1006|consen  223 AKTVDAGCRPYMAPERIDPSDKGYD-IRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSF  301 (361)
T ss_pred             HhhhccCCccccChhccCCccCCcc-hhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCH
Confidence            3334578899999999853  3465 68999999999999999999998754 334445566676553   2   23788


Q ss_pred             HHHHHHHHhhhhCCCCCCCHHHHhh
Q psy2648         271 DCENLLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       271 ~~~~Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      .+..+|.-||.+|-..||..++++.
T Consensus       302 ~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  302 SMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             HHHHHHHHHhhcccccCcchhhhhc
Confidence            9999999999999999999998773


No 386
>KOG0668|consensus
Probab=100.00  E-value=7.2e-36  Score=290.96  Aligned_cols=243  Identities=24%  Similarity=0.498  Sum_probs=203.4

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeC--CEE
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETE--KTL  120 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~--~~~  120 (708)
                      .+++|++.+.+|+|-|++||.|.+..+.++++||++++     -..+++.||+.||+.|. |||||+|+++..+.  ...
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktp  110 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP-----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTP  110 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech-----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCc
Confidence            46789999999999999999999999999999999864     34567899999999997 99999999999775  467


Q ss_pred             EEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCC-CcEEEEeccCccccCCCC
Q psy2648         121 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE-MNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~-~~iKL~DFGls~~~~~~~  199 (708)
                      .||+||+.+.|....   -..++..+++.++.||+.||.|||++||+|||+||.|++||.. ..++|+|+||+..+.++.
T Consensus       111 aLiFE~v~n~Dfk~l---y~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~  187 (338)
T KOG0668|consen  111 SLIFEYVNNTDFKQL---YPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK  187 (338)
T ss_pred             hhHhhhhccccHHHH---hhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCc
Confidence            899999998775543   3578899999999999999999999999999999999999975 469999999999999998


Q ss_pred             CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCC--CCHHHHH------------HHHHcCCCCC-
Q psy2648         200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--STLRELR------------ERVLRGKYRI-  264 (708)
Q Consensus       200 ~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~--~~~~~l~------------~~i~~~~~~~-  264 (708)
                      ..+....+..|--||++..-......-|+|||||+|..|+..+-||..  .+..++.            .-+.+-...+ 
T Consensus       188 eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ld  267 (338)
T KOG0668|consen  188 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLD  267 (338)
T ss_pred             eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCC
Confidence            888889999999999997655445789999999999999999999853  2333322            1111111111 


Q ss_pred             -------------C----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         265 -------------P----------FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       265 -------------p----------~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                                   |          .-.++++.|||.++|.+|.++|+|+.+++
T Consensus       268 p~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam  320 (338)
T KOG0668|consen  268 PQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAM  320 (338)
T ss_pred             hhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHh
Confidence                         1          12468999999999999999999999877


No 387
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00  E-value=3.7e-34  Score=329.17  Aligned_cols=250  Identities=22%  Similarity=0.287  Sum_probs=176.8

Q ss_pred             CCCccCCeEEEeEEcccCceEEEEEEEcCC----CcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEE---
Q psy2648          41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPT----GKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQV---  113 (708)
Q Consensus        41 ~~~~~~~Y~i~~~LG~G~fg~V~la~~~~t----g~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~---  113 (708)
                      .....++|++.+.||+|+||.||+|.+..+    +..||||.+.....    .+....| + ++...+.+++.++..   
T Consensus       127 ~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e-~-l~~~~~~~~~~~~~~~~~  200 (566)
T PLN03225        127 PSFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE-R-VRRACPNSCADFVYGFLE  200 (566)
T ss_pred             CCCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH-H-HHhhchhhHHHHHHhhhc
Confidence            344578999999999999999999999998    99999998864321    1111111 1 122222222222211   


Q ss_pred             ---EEeCCEEEEEEeccCCCChHHHHHHcCC--------------------CCHHHHHHHHHHHHHHHHHHHHCCceecC
Q psy2648         114 ---IETEKTLYLVMEYASGGEVFDYLVLHGR--------------------MKEKEARAKFRQIVSAVQYCHQKKIIHRD  170 (708)
Q Consensus       114 ---~~~~~~~ylVmEy~~gg~L~~~i~~~~~--------------------l~e~~~~~i~~QI~~aL~yLH~~gIvHRD  170 (708)
                         ......+||||||+.+++|.+++.....                    ..+..+..++.||+.||+|||+++|+|||
T Consensus       201 ~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRD  280 (566)
T PLN03225        201 PVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRD  280 (566)
T ss_pred             ccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCc
Confidence               2456689999999999999998865421                    12344678999999999999999999999


Q ss_pred             CCCCCEEEcC-CCcEEEEeccCccccCCC--CCccccccCCcccccccccCCccC---------------------CCch
Q psy2648         171 LKAENLLLDS-EMNIKIADFGFSNEFTPG--NKLDTFCGSPPYAAPELFQGKKYD---------------------GPEV  226 (708)
Q Consensus       171 LKPeNILld~-~~~iKL~DFGls~~~~~~--~~~~~~~Gt~~Y~APE~l~~~~~~---------------------~~~~  226 (708)
                      |||+|||++. ++.+||+|||+++.+..+  ....+++|++.|+|||++....+.                     ..++
T Consensus       281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~  360 (566)
T PLN03225        281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF  360 (566)
T ss_pred             CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence            9999999996 579999999999765432  234567899999999976432211                     1356


Q ss_pred             hHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC---------------------CCCCCCHHHHHHHHHhhhhCCC
Q psy2648         227 DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR---------------------IPFYMSTDCENLLKKFLVLNPA  285 (708)
Q Consensus       227 DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~---------------------~p~~~s~~~~~Li~~~L~~dP~  285 (708)
                      |||||||+||||+++.+|+... ...+...+....+.                     +......+..+||.+||++||+
T Consensus       361 DVwSlGviL~el~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~  439 (566)
T PLN03225        361 DIYSAGLIFLQMAFPNLRSDSN-LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGR  439 (566)
T ss_pred             ccHHHHHHHHHHHhCcCCCchH-HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcc
Confidence            9999999999999988876532 22222222221111                     0011223455899999999999


Q ss_pred             CCCCHHHHh---hhh
Q psy2648         286 KRASLEVSG---EVT  297 (708)
Q Consensus       286 ~Rps~~~~~---~~~  297 (708)
                      +|||+++++   |+.
T Consensus       440 kR~ta~e~L~Hpff~  454 (566)
T PLN03225        440 QRISAKAALAHPYFD  454 (566)
T ss_pred             cCCCHHHHhCCcCcC
Confidence            999999988   664


No 388
>KOG0587|consensus
Probab=100.00  E-value=2.9e-34  Score=323.05  Aligned_cols=246  Identities=30%  Similarity=0.499  Sum_probs=209.1

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEe-----CC
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIET-----EK  118 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~-----~~  118 (708)
                      -+.|+|.++||+|.+|+||+++++.+++.+||||+....   +..+.+..|.+||+.+ +|||++.+|++|.-     .+
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~---d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D   94 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE---DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD   94 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc---cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence            357999999999999999999999999999999987653   2335577899999877 59999999999863     46


Q ss_pred             EEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccC
Q psy2648         119 TLYLVMEYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT  196 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~  196 (708)
                      .+|||||||.||+.-|+++..  .++.|+.+..|++.++.||.+||.+.++|||||-.||||+.++.|||+|||++....
T Consensus        95 qLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQld  174 (953)
T KOG0587|consen   95 QLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  174 (953)
T ss_pred             eEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeee
Confidence            899999999999999988654  578899999999999999999999999999999999999999999999999998775


Q ss_pred             CC-CCccccccCCcccccccccCC-----ccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC---CCCC
Q psy2648         197 PG-NKLDTFCGSPPYAAPELFQGK-----KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR---IPFY  267 (708)
Q Consensus       197 ~~-~~~~~~~Gt~~Y~APE~l~~~-----~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~---~p~~  267 (708)
                      .. ....++.|||.|||||++...     .|+ ..+|+||||++..||.-|.+|+-+..+...+-.|-+...+   -|..
T Consensus       175 sT~grRnT~iGtP~WMAPEViac~e~~d~tyd-~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~k  253 (953)
T KOG0587|consen  175 STVGRRNTFIGTPYWMAPEVIACDESPDATYD-YRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKK  253 (953)
T ss_pred             cccccccCcCCCcccccceeeecccCCCCCcc-cccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhh
Confidence            43 345788999999999999643     243 5789999999999999999999888766554444433221   2456


Q ss_pred             CCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         268 MSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       268 ~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .+.++.++|+.||.+|-.+||+..+++
T Consensus       254 Ws~~FndFIs~cL~Kd~e~RP~~~~ll  280 (953)
T KOG0587|consen  254 WSKKFNDFISTCLVKDYEQRPSTEELL  280 (953)
T ss_pred             HHHHHHHHHHHHHhhccccCcchhhhc
Confidence            788999999999999999999987654


No 389
>KOG0200|consensus
Probab=100.00  E-value=2.2e-33  Score=325.62  Aligned_cols=247  Identities=29%  Similarity=0.501  Sum_probs=212.9

Q ss_pred             CeEEEeEEcccCceEEEEEEEc---C----CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCC
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHV---P----TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEK  118 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~---~----tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~  118 (708)
                      +.++.+.||+|.||+|++|.-.   .    ....||||.++..... .+.+.+..|+++|+.+. ||||+.+++++...+
T Consensus       297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~  375 (609)
T KOG0200|consen  297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQDG  375 (609)
T ss_pred             hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence            3356779999999999998743   1    1457999998765544 66778999999999885 999999999999999


Q ss_pred             EEEEEEeccCCCChHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCC
Q psy2648         119 TLYLVMEYASGGEVFDYLVLHG----------------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM  182 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~~----------------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~  182 (708)
                      .+++|+|||..|+|.+|++.+.                .++..+...+..||+.|++||++..+|||||-..|||+.++.
T Consensus       376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~  455 (609)
T KOG0200|consen  376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNK  455 (609)
T ss_pred             ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCC
Confidence            9999999999999999998766                388899999999999999999999999999999999999999


Q ss_pred             cEEEEeccCccccCCCCCc--cccccCCc--ccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCC-HHHHHHH
Q psy2648         183 NIKIADFGFSNEFTPGNKL--DTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGST-LRELRER  256 (708)
Q Consensus       183 ~iKL~DFGls~~~~~~~~~--~~~~Gt~~--Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~-~~~l~~~  256 (708)
                      .+||+|||+++........  ....|+.+  |||||.+....|+ .++||||+||+|||+++ |..||.+.. ..++.+.
T Consensus       456 ~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft-~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~  534 (609)
T KOG0200|consen  456 VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFT-SKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEF  534 (609)
T ss_pred             EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCccc-ccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHH
Confidence            9999999999865443322  22233344  9999999998885 79999999999999999 999999865 7788888


Q ss_pred             HHcCCC-CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHhh
Q psy2648         257 VLRGKY-RIPFYMSTDCENLLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       257 i~~~~~-~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      +..|.. ..|.++++++.++++.||..+|++||++.++..
T Consensus       535 l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  535 LKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             HhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            888854 679999999999999999999999999988773


No 390
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00  E-value=5.5e-34  Score=349.37  Aligned_cols=235  Identities=22%  Similarity=0.310  Sum_probs=187.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      ..|...+.||+|+||.||+|++..+++.||||.+......      ...|+++|++++|||||++++++.++...|+|||
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E  763 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE  763 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence            3566678999999999999999999999999998643211      1346889999999999999999999999999999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcc
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH---QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD  202 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH---~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~  202 (708)
                      |+++|+|.+++.   .+++.+...++.||+.||+|||   +.+|+||||||+|||++.++..++. ||........   .
T Consensus       764 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~---~  836 (968)
T PLN00113        764 YIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD---T  836 (968)
T ss_pred             CCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC---C
Confidence            999999999985   4889999999999999999999   6699999999999999999888875 6665433211   2


Q ss_pred             ccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHcC-C------CCC------
Q psy2648         203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST-----LRELRERVLRG-K------YRI------  264 (708)
Q Consensus       203 ~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~-----~~~l~~~i~~~-~------~~~------  264 (708)
                      ...||+.|+|||++.+..|+ .++|||||||++|||++|+.||....     ..+........ .      ..+      
T Consensus       837 ~~~~t~~y~aPE~~~~~~~~-~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  915 (968)
T PLN00113        837 KCFISSAYVAPETRETKDIT-EKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSV  915 (968)
T ss_pred             CccccccccCcccccCCCCC-cccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCc
Confidence            34688999999999988875 79999999999999999999996421     11111111100 0      001      


Q ss_pred             CCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         265 PFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       265 p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +.....++.+++.+||+.||++||+++++.
T Consensus       916 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl  945 (968)
T PLN00113        916 NQNEIVEVMNLALHCTATDPTARPCANDVL  945 (968)
T ss_pred             cHHHHHHHHHHHHhhCcCCchhCcCHHHHH
Confidence            111123567899999999999999999887


No 391
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00  E-value=7.2e-33  Score=311.91  Aligned_cols=251  Identities=21%  Similarity=0.294  Sum_probs=184.6

Q ss_pred             ccCCeEEEeEEcccCceEEEEEEEc----------------CCCcEEEEEEeccCCCCh------------hhHHHHHHH
Q psy2648          44 HIGKYKLLKTIGKGNFAKVKLAKHV----------------PTGKEVAIKIIDKTQLNP------------GSLQKLFRE   95 (708)
Q Consensus        44 ~~~~Y~i~~~LG~G~fg~V~la~~~----------------~tg~~vAvK~i~~~~~~~------------~~~~~~~~E   95 (708)
                      ..++|++.+.||+|+||.||+|...                ..++.||||.+.......            ...+....|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            4568999999999999999999752                345689999986432110            011223457


Q ss_pred             HHHHHhCCCCCe-----eeEEEEEEe--------CCEEEEEEeccCCCChHHHHHHcC----------------------
Q psy2648          96 VRIMKMLDHPNI-----VKLFQVIET--------EKTLYLVMEYASGGEVFDYLVLHG----------------------  140 (708)
Q Consensus        96 i~il~~l~HpnI-----v~l~~~~~~--------~~~~ylVmEy~~gg~L~~~i~~~~----------------------  140 (708)
                      +.++.+++|.++     ++++++|..        ++..||||||+++++|.+++....                      
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777777776654     566666542        356899999999999999886421                      


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcccc--ccCCcccccccc
Q psy2648         141 --RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF--CGSPPYAAPELF  216 (708)
Q Consensus       141 --~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~--~Gt~~Y~APE~l  216 (708)
                        .+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++.....+......  .+++.|+|||++
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l  382 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEEL  382 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhh
Confidence              2345678889999999999999999999999999999999999999999999765443333333  347899999998


Q ss_pred             cCCc--------------------cC-CCchhHHHHHHHHHHHHcCCC-CCCCCCH-----------HHHHHHHHcCCCC
Q psy2648         217 QGKK--------------------YD-GPEVDVWSLGVILYTLVSGSL-PFDGSTL-----------RELRERVLRGKYR  263 (708)
Q Consensus       217 ~~~~--------------------~~-~~~~DIWSlGvilyelltG~~-Pf~~~~~-----------~~l~~~i~~~~~~  263 (708)
                      ....                    |. ..+.||||+||+||+|++|.+ ||.+...           ......+....+.
T Consensus       383 ~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~  462 (507)
T PLN03224        383 VMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYD  462 (507)
T ss_pred             cCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCC
Confidence            6432                    11 124799999999999999986 7764211           1111223334444


Q ss_pred             CC--CCCCHHHHHHHHHhhhhCC---CCCCCHHHHh
Q psy2648         264 IP--FYMSTDCENLLKKFLVLNP---AKRASLEVSG  294 (708)
Q Consensus       264 ~p--~~~s~~~~~Li~~~L~~dP---~~Rps~~~~~  294 (708)
                      ++  ...++++.|||.+||..+|   .+|+|+++++
T Consensus       463 ~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL  498 (507)
T PLN03224        463 FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQAL  498 (507)
T ss_pred             cccccccChHHHHHHHHHhccCCCCcccCCCHHHHh
Confidence            43  3468899999999999876   6899999987


No 392
>KOG1025|consensus
Probab=100.00  E-value=9.1e-34  Score=315.30  Aligned_cols=244  Identities=28%  Similarity=0.476  Sum_probs=214.1

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCc----EEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGK----EVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLV  123 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~----~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylV  123 (708)
                      .+..++||+|+||.||+|.+...|+    +||||++.... .++..+.+++|+-+|..|+|||+++|++++.... +-||
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv  775 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV  775 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC-CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence            3456899999999999999988776    58888886544 3445567999999999999999999999998765 8899


Q ss_pred             EeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCcc
Q psy2648         124 MEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD  202 (708)
Q Consensus       124 mEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~  202 (708)
                      ++|++.|.|.+|++.+ +.+...+...|..||++||.|||.+++|||||-..|+|+..-..+||.|||+++...++....
T Consensus       776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey  855 (1177)
T KOG1025|consen  776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY  855 (1177)
T ss_pred             HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence            9999999999999876 578899999999999999999999999999999999999999999999999999876554322


Q ss_pred             c-cc--cCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHH
Q psy2648         203 T-FC--GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPFYMSTDCENLLK  277 (708)
Q Consensus       203 ~-~~--Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~~~s~~~~~Li~  277 (708)
                      . ..  -.+.|||-|.+....|. .++|||||||++||++| |..||.+...+++...+..|. ...|...+-|+.-++.
T Consensus       856 ~~~~gK~pikwmale~i~~~~~t-hqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~mv  934 (1177)
T KOG1025|consen  856 SAPGGKVPIKWMALESIRIRKYT-HQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVMV  934 (1177)
T ss_pred             cccccccCcHHHHHHHhhccCCC-chhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCccHHHHHHHH
Confidence            2 22  24579999999988885 79999999999999999 999999999999988888874 4567889999999999


Q ss_pred             HhhhhCCCCCCCHHHHh
Q psy2648         278 KFLVLNPAKRASLEVSG  294 (708)
Q Consensus       278 ~~L~~dP~~Rps~~~~~  294 (708)
                      +||..|+..||+++++.
T Consensus       935 kCwmid~~~rp~fkel~  951 (1177)
T KOG1025|consen  935 KCWMIDADSRPTFKELA  951 (1177)
T ss_pred             HHhccCcccCccHHHHH
Confidence            99999999999998876


No 393
>KOG0984|consensus
Probab=100.00  E-value=1.6e-33  Score=271.07  Aligned_cols=217  Identities=25%  Similarity=0.472  Sum_probs=175.5

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHH-HhCCCCCeeeEEEEEEeCCEEEEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIM-KMLDHPNIVKLFQVIETEKTLYLVM  124 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il-~~l~HpnIv~l~~~~~~~~~~ylVm  124 (708)
                      +....+..||+|+||.|-+-+|..+|+..|+|.+... .+....++.++|+.+. +....|++|.+|+.+..+..+||.|
T Consensus        46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~t-vn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM  124 (282)
T KOG0984|consen   46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRAT-VNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM  124 (282)
T ss_pred             hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhh-cChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence            4555678899999999999999999999999999754 4455667888999885 4568999999999999999999999


Q ss_pred             eccCCCChHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         125 EYASGGEVFDYL----VLHGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       125 Ey~~gg~L~~~i----~~~~~l~e~~~~~i~~QI~~aL~yLH~~-gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      |.+.- +|..|.    ...+.++|.-+-+++.-++.||.|||++ .|||||+||.||||+.+|++||||||++..+...-
T Consensus       125 E~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi  203 (282)
T KOG0984|consen  125 ELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI  203 (282)
T ss_pred             HHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhh
Confidence            99863 665543    3346799999999999999999999986 89999999999999999999999999987654332


Q ss_pred             CccccccCCcccccccccCC----ccCCCchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHcC-CCCCC
Q psy2648         200 KLDTFCGSPPYAAPELFQGK----KYDGPEVDVWSLGVILYTLVSGSLPFDG-STLRELRERVLRG-KYRIP  265 (708)
Q Consensus       200 ~~~~~~Gt~~Y~APE~l~~~----~~~~~~~DIWSlGvilyelltG~~Pf~~-~~~~~l~~~i~~~-~~~~p  265 (708)
                      ...-..|.-+|||||.+...    .|+ -++||||||+.++||.++++||+. .+..+...+|... .+.+|
T Consensus       204 Akt~daGCkpYmaPEri~~e~n~~gY~-vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~P~Lp  274 (282)
T KOG0984|consen  204 AKTMDAGCKPYMAPERINPELNQKGYS-VKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSPQLP  274 (282)
T ss_pred             HHHHhcCCCccCChhhcCcccCcccce-eehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCCCCCc
Confidence            22225788899999998532    454 689999999999999999999975 3444444444443 33344


No 394
>KOG0598|consensus
Probab=100.00  E-value=7.1e-34  Score=295.81  Aligned_cols=207  Identities=29%  Similarity=0.379  Sum_probs=160.7

Q ss_pred             CCCCCCCCCCcCCCcccccccccccc----------------ccCcccccccccCceeEEEEEEEeCCEEEEEEeccCCC
Q psy2648         434 GSGGGGGGGAAQSPSHRGVHRSISAS----------------NAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGG  497 (708)
Q Consensus       434 ~~~ggg~~g~v~s~~hr~~~R~i~~~----------------~~~~~~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg  497 (708)
                      ...|.|++|.|..++++...+--..+                ..+........||.||+|+..||+.+.+|||+||+.||
T Consensus        31 kviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GG  110 (357)
T KOG0598|consen   31 KVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGG  110 (357)
T ss_pred             eeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCc
Confidence            34567788888877777443311110                11222335579999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCCCEEEeeccCcccc-CCCCcccccccCCc
Q psy2648         498 EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPP  576 (708)
Q Consensus       498 ~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~-~~~~~~~~~~Gt~~  576 (708)
                      +|+.+|.++++|+|+.|++|+++|+.||.|||++|||||||||||||||..|+++|+||||++.. ..+....++|||+.
T Consensus       111 eLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~e  190 (357)
T KOG0598|consen  111 ELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPE  190 (357)
T ss_pred             cHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999954 55567788999999


Q ss_pred             ccccccccCCCCccCCCCCCCCCcccCC-----CCCCCcc---------c--cccccccccchhhhHHHHhhCCCCCCCC
Q psy2648         577 YAAPELFQGGAPVTSSGGAGTNHTHNSS-----ISPAPTN---------F--KRQNTIDSASIKENTARLNAGRPAKNTA  640 (708)
Q Consensus       577 Y~APEvl~g~~~~~~s~~~~~~~~~~~~-----~~~~~~~---------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  640 (708)
                      |||||++.+..+..+.+-|+.+.+.+.+     +..+...         .  .......+..+++++.+|+.-.|.+|+|
T Consensus       191 YmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg  270 (357)
T KOG0598|consen  191 YMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLG  270 (357)
T ss_pred             ccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcC
Confidence            9999999988544444333222222222     2222221         0  1122235889999999999999999999


No 395
>KOG0665|consensus
Probab=100.00  E-value=7.5e-33  Score=282.06  Aligned_cols=244  Identities=29%  Similarity=0.507  Sum_probs=201.9

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC------E
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK------T  119 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------~  119 (708)
                      .+|.-++.+|.|.= .|..|.+.-+++.||+|.+.....+....++..+|..+|..++|+|||+++.+|....      .
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e   95 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE   95 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence            47888999999988 7778889999999999998776656566778999999999999999999999986543      5


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q psy2648         120 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN  199 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~  199 (708)
                      +|+||||+.. +|.+.+.  -.++-+.+..++.|++.|++|||+.||+||||||+||++..+..+||.|||+++.-...-
T Consensus        96 ~y~v~e~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~  172 (369)
T KOG0665|consen   96 VYLVMELMDA-NLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDF  172 (369)
T ss_pred             HHHHHHhhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCccc
Confidence            8999999964 8888776  356778899999999999999999999999999999999999999999999998655443


Q ss_pred             CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc--------------------
Q psy2648         200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR--------------------  259 (708)
Q Consensus       200 ~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~--------------------  259 (708)
                      ...-...|..|.|||++.+..|. ..+||||+||++.||++|..-|.|.+.-+-..+|.+                    
T Consensus       173 ~mtpyVvtRyyrapevil~~~~k-e~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~y  251 (369)
T KOG0665|consen  173 MMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNY  251 (369)
T ss_pred             ccCchhheeeccCchheeccCCc-ccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHH
Confidence            45567889999999999999875 789999999999999999999998654322222210                    


Q ss_pred             --C--C---CC----CCC-----------CCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         260 --G--K---YR----IPF-----------YMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       260 --~--~---~~----~p~-----------~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                        -  +   +.    +|.           .-+..+++|+.+||..||++|.++++++
T Consensus       252 v~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL  308 (369)
T KOG0665|consen  252 VENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDAL  308 (369)
T ss_pred             hhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHh
Confidence              0  0   00    121           1234579999999999999999999987


No 396
>KOG2052|consensus
Probab=100.00  E-value=2e-32  Score=288.92  Aligned_cols=241  Identities=28%  Similarity=0.465  Sum_probs=193.0

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHH--hCCCCCeeeEEEEEEeC----CE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK--MLDHPNIVKLFQVIETE----KT  119 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~--~l~HpnIv~l~~~~~~~----~~  119 (708)
                      .+-.+.+.||+|.||+||+|+++  |+.||||++...     +.+..+||.+|.+  +|+|+||+.+++.-..+    .+
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr-----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ  283 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR-----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ  283 (513)
T ss_pred             heeEEEEEecCccccceeecccc--CCceEEEEeccc-----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence            35789999999999999999984  899999998643     3457889999987  67999999998764332    26


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CceecCCCCCCEEEcCCCcEEEEeccC
Q psy2648         120 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK--------KIIHRDLKAENLLLDSEMNIKIADFGF  191 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~--------gIvHRDLKPeNILld~~~~iKL~DFGl  191 (708)
                      +|||++|-+.|+|+|||.+ ..++.+.+.+++.-+++||+|||-.        .|.|||||..|||+.+++.+-|+|+||
T Consensus       284 LwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL  362 (513)
T KOG2052|consen  284 LWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  362 (513)
T ss_pred             EEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence            8999999999999999986 6899999999999999999999952        499999999999999999999999999


Q ss_pred             ccccCCC-----CCccccccCCcccccccccCCc----cC-CCchhHHHHHHHHHHHHcC----------CCCCCC----
Q psy2648         192 SNEFTPG-----NKLDTFCGSPPYAAPELFQGKK----YD-GPEVDVWSLGVILYTLVSG----------SLPFDG----  247 (708)
Q Consensus       192 s~~~~~~-----~~~~~~~Gt~~Y~APE~l~~~~----~~-~~~~DIWSlGvilyelltG----------~~Pf~~----  247 (708)
                      |-.....     ...+..+||-.|||||++...-    ++ -..+||||||.|+||++..          ++||.+    
T Consensus       363 Av~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~  442 (513)
T KOG2052|consen  363 AVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPS  442 (513)
T ss_pred             eEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCC
Confidence            9765433     2346689999999999996432    11 2468999999999999863          688875    


Q ss_pred             -CCHHHHHHHHHcCCCC--CCC-CCCH----HHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         248 -STLRELRERVLRGKYR--IPF-YMST----DCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       248 -~~~~~l~~~i~~~~~~--~p~-~~s~----~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                       .+.+++.+-|.-.+++  +|. +-|.    .+..||+.||..||.-|.|+=-+.
T Consensus       443 DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  443 DPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             CCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence             4566766655544433  443 2332    346789999999999999875444


No 397
>KOG0664|consensus
Probab=99.98  E-value=4.3e-34  Score=284.40  Aligned_cols=246  Identities=28%  Similarity=0.484  Sum_probs=203.2

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC-----EEEE
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEK-----TLYL  122 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-----~~yl  122 (708)
                      -+-.+.||-|+||+||-+.+..+|+.||+|.+..-..+-...+++++|+++|..++|.|++..+++.+...     .+|+
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV  134 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV  134 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence            34457899999999999999999999999988755444456678999999999999999999999987653     4789


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCC--
Q psy2648         123 VMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--  200 (708)
Q Consensus       123 VmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~--  200 (708)
                      |+|++.. ||...|..-..++.+.++-++.||+.||+|||+.+|.||||||.|+|++.+-.+|||||||++.......  
T Consensus       135 ~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~h  213 (449)
T KOG0664|consen  135 LTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLN  213 (449)
T ss_pred             HHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhh
Confidence            9999864 8888888878899999999999999999999999999999999999999999999999999987654432  


Q ss_pred             ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-----------------------H
Q psy2648         201 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRER-----------------------V  257 (708)
Q Consensus       201 ~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~-----------------------i  257 (708)
                      ...-.-|..|.|||++.|......++||||.|||+.||+-.+.-|...+.-+-.+.                       +
T Consensus       214 MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~  293 (449)
T KOG0664|consen  214 MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHV  293 (449)
T ss_pred             hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHh
Confidence            23345678899999999876556799999999999999999999987654433222                       3


Q ss_pred             HcCCCCCCC-----------CCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         258 LRGKYRIPF-----------YMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       258 ~~~~~~~p~-----------~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +++....|.           .-.-+..+++.+||..||++|++.++..
T Consensus       294 LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~  341 (449)
T KOG0664|consen  294 LRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEAL  341 (449)
T ss_pred             hccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhc
Confidence            334333332           1234678899999999999999998765


No 398
>KOG0595|consensus
Probab=99.98  E-value=3.9e-33  Score=292.55  Aligned_cols=164  Identities=34%  Similarity=0.550  Sum_probs=139.3

Q ss_pred             cCCCCCCCCCCcCCCcccccccccccccc--C-------------cccccccccCceeEEEEEEEeCCEEEEEEeccCCC
Q psy2648         433 GGSGGGGGGGAAQSPSHRGVHRSISASNA--K-------------PSRRASSGGETLLKLFQVIETEKTLYLVMEYASGG  497 (708)
Q Consensus       433 ~~~~ggg~~g~v~s~~hr~~~R~i~~~~~--~-------------~~~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg  497 (708)
                      ....|.|.|++|+..+|+..+..+..+..  +             -.......|||||.|++++++++++|||||||.||
T Consensus        15 ~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gG   94 (429)
T KOG0595|consen   15 SREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGG   94 (429)
T ss_pred             hhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCC
Confidence            44577888888888888776654333211  1             11224568999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCC------CCEEEeeccCccccCCCCccccc
Q psy2648         498 EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE------MNIKIADFGFSNEFTPGNKLDTF  571 (708)
Q Consensus       498 ~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~------~~vKl~DFGla~~~~~~~~~~~~  571 (708)
                      ||.++|..++.++|+.++.++.||+.||++||+++||||||||+||||+..      -.+||+|||+|+.+.++....+.
T Consensus        95 DLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tl  174 (429)
T KOG0595|consen   95 DLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETL  174 (429)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHh
Confidence            999999999999999999999999999999999999999999999999865      45899999999999999999999


Q ss_pred             ccCCcccccccccCCCCccCCCCCC
Q psy2648         572 CGSPPYAAPELFQGGAPVTSSGGAG  596 (708)
Q Consensus       572 ~Gt~~Y~APEvl~g~~~~~~s~~~~  596 (708)
                      ||||.||||||++...+...++-|+
T Consensus       175 cGSplYMAPEV~~~~~YdAKADLWS  199 (429)
T KOG0595|consen  175 CGSPLYMAPEVIMSQQYDAKADLWS  199 (429)
T ss_pred             hCCccccCHHHHHhccccchhhHHH
Confidence            9999999999998777655554443


No 399
>KOG3653|consensus
Probab=99.98  E-value=4.2e-32  Score=288.46  Aligned_cols=242  Identities=27%  Similarity=0.425  Sum_probs=197.1

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHH--hCCCCCeeeEEEEEEeCC----
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK--MLDHPNIVKLFQVIETEK----  118 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~--~l~HpnIv~l~~~~~~~~----  118 (708)
                      +..-+++..||+|.||.||+|+.  +++.||||++..     .+.+.+..|-+|.+  .+.|+||++++.+-+...    
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~  281 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRM  281 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhc--cCceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccc
Confidence            45677889999999999999976  569999999863     45667888888877  468999999998765544    


Q ss_pred             EEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---------CCceecCCCCCCEEEcCCCcEEEEec
Q psy2648         119 TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ---------KKIIHRDLKAENLLLDSEMNIKIADF  189 (708)
Q Consensus       119 ~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~---------~gIvHRDLKPeNILld~~~~iKL~DF  189 (708)
                      .++||+||.+.|+|.+||..+ .++..+..+++.-++.||+|||+         ..|+|||||..|||+.+|+..-|+||
T Consensus       282 eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF  360 (534)
T KOG3653|consen  282 EYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF  360 (534)
T ss_pred             ceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence            799999999999999999754 78999999999999999999996         35999999999999999999999999


Q ss_pred             cCccccCCCC---CccccccCCcccccccccCCccC-----CCchhHHHHHHHHHHHHcCC------------CCCC---
Q psy2648         190 GFSNEFTPGN---KLDTFCGSPPYAAPELFQGKKYD-----GPEVDVWSLGVILYTLVSGS------------LPFD---  246 (708)
Q Consensus       190 Gls~~~~~~~---~~~~~~Gt~~Y~APE~l~~~~~~-----~~~~DIWSlGvilyelltG~------------~Pf~---  246 (708)
                      |||..+.++.   .+...+||..|||||++.|.-.-     -.+.||||+|.|||||++..            +||+   
T Consensus       361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev  440 (534)
T KOG3653|consen  361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV  440 (534)
T ss_pred             ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence            9998876543   34457899999999999775321     13679999999999999853            3454   


Q ss_pred             --CCCHHHHHHHHHcCC--CCCCCC-----CCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         247 --GSTLRELRERVLRGK--YRIPFY-----MSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       247 --~~~~~~l~~~i~~~~--~~~p~~-----~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                        ..+.+++...+.+.+  +.+|..     --.-+++.|..||..||+-|.|+.-+.
T Consensus       441 G~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~  497 (534)
T KOG3653|consen  441 GNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVE  497 (534)
T ss_pred             cCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHH
Confidence              235677777776654  335532     123578999999999999999987554


No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97  E-value=1.1e-30  Score=262.74  Aligned_cols=214  Identities=46%  Similarity=0.742  Sum_probs=187.7

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYA  127 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~  127 (708)
                      |.+.+.||+|+||.||++.+..+++.||||.+...... ...+.+.+|++.++.++|+||+++++.+......|+++||+
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~   79 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC   79 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence            67889999999999999999999999999999865433 24567889999999999999999999999989999999999


Q ss_pred             CCCChHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCC--Ccccc
Q psy2648         128 SGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN--KLDTF  204 (708)
Q Consensus       128 ~gg~L~~~i~~~~~-l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~--~~~~~  204 (708)
                      .+++|.+++..... +++..+..++.|++.+|.|||+++++|+||+|.||+++.++.++|+|||++.......  .....
T Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~  159 (225)
T smart00221       80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV  159 (225)
T ss_pred             CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence            99999999987766 8999999999999999999999999999999999999999999999999987765432  34556


Q ss_pred             ccCCcccccccc-cCCccCCCchhHHHHHHHHHHHHcCCCCCCC--CCHHHHHHHHHcCCCC
Q psy2648         205 CGSPPYAAPELF-QGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--STLRELRERVLRGKYR  263 (708)
Q Consensus       205 ~Gt~~Y~APE~l-~~~~~~~~~~DIWSlGvilyelltG~~Pf~~--~~~~~l~~~i~~~~~~  263 (708)
                      +++..|++||++ ....++ .++||||||+++|+|++|+.||..  .+..++.+.+..+...
T Consensus       160 ~~~~~~~~pe~~~~~~~~~-~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  220 (225)
T smart00221      160 KGTPFYLAPEVLLGGKGYG-EAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGVPL  220 (225)
T ss_pred             eccCCcCCHhHhcCCCCCC-chhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCCcc
Confidence            788999999998 555554 589999999999999999999987  4555788888877643


No 401
>KOG0670|consensus
Probab=99.97  E-value=2.3e-32  Score=291.71  Aligned_cols=204  Identities=30%  Similarity=0.507  Sum_probs=175.3

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC------CCCeeeEEEEEEeCCE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD------HPNIVKLFQVIETEKT  119 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~------HpnIv~l~~~~~~~~~  119 (708)
                      ++|.+....|+|-|+.|..|.+...|..||||||.....   ..+.=++|++||++|+      --|+++|+..|...++
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~---M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH  508 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV---MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH  508 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH---HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence            489999999999999999999999999999999976432   1233468999999996      3489999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCc-EEEEeccCcccc
Q psy2648         120 LYLVMEYASGGEVFDYLVLHG---RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEF  195 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~---~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~-iKL~DFGls~~~  195 (708)
                      +|||+|-+. .+|.+.|.+.|   .|....++.|..||..||..|-..||+|.||||+|||+++..+ +||||||.|...
T Consensus       509 LClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~  587 (752)
T KOG0670|consen  509 LCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFA  587 (752)
T ss_pred             eEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccc
Confidence            999999875 58999888766   4788899999999999999999999999999999999998755 699999987654


Q ss_pred             CCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q psy2648         196 TPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRE  255 (708)
Q Consensus       196 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~  255 (708)
                      .. +...-+.-+..|.|||++.|.+|+ ...|+||.||+||||.||+.-|.|.+...++.
T Consensus       588 ~e-neitPYLVSRFYRaPEIiLG~~yd-~~iD~WSvgctLYElYtGkIlFpG~TNN~MLr  645 (752)
T KOG0670|consen  588 SE-NEITPYLVSRFYRAPEIILGLPYD-YPIDTWSVGCTLYELYTGKILFPGRTNNQMLR  645 (752)
T ss_pred             cc-ccccHHHHHHhccCcceeecCccc-CCccceeeceeeEEeeccceecCCCCcHHHHH
Confidence            43 334445667789999999999997 67999999999999999999999987665543


No 402
>KOG1345|consensus
Probab=99.97  E-value=2e-32  Score=272.88  Aligned_cols=242  Identities=26%  Similarity=0.492  Sum_probs=193.8

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEE-EEeCCEEEE
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQV-IETEKTLYL  122 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~-~~~~~~~yl  122 (708)
                      .+.|.|.+.||+|.||++.+|+|+.+.+.+|+|.+.+...   ..+.|.+|...--.|. |.|||..|++ |++.+.+++
T Consensus        23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t---t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF   99 (378)
T KOG1345|consen   23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT---TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF   99 (378)
T ss_pred             hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh---hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence            4689999999999999999999999999999999976543   3456788877655554 8999999986 889999999


Q ss_pred             EEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcC--CCcEEEEeccCccccCCCCC
Q psy2648         123 VMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS--EMNIKIADFGFSNEFTPGNK  200 (708)
Q Consensus       123 VmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~--~~~iKL~DFGls~~~~~~~~  200 (708)
                      +||||+.|||.+-+.. ..+.|.-.+.++.|+++||+|+|++++||||||.+||||-.  ...|||||||+.+..  +..
T Consensus       100 ~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~--g~t  176 (378)
T KOG1345|consen  100 VQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV--GTT  176 (378)
T ss_pred             eeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccccccc--Cce
Confidence            9999999999987754 56889999999999999999999999999999999999843  347999999987542  333


Q ss_pred             ccccccCCcccccccccCCc---c-CCCchhHHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHcCCCCCCC---CC
Q psy2648         201 LDTFCGSPPYAAPELFQGKK---Y-DGPEVDVWSLGVILYTLVSGSLPFDGSTL-----RELRERVLRGKYRIPF---YM  268 (708)
Q Consensus       201 ~~~~~Gt~~Y~APE~l~~~~---~-~~~~~DIWSlGvilyelltG~~Pf~~~~~-----~~l~~~i~~~~~~~p~---~~  268 (708)
                      ....--+..|.+||++....   + ..+.+|||.||+++|..+||.+||+....     -+..+...+.....|.   ..
T Consensus       177 V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~f  256 (378)
T KOG1345|consen  177 VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPF  256 (378)
T ss_pred             ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhccc
Confidence            33444566799999874322   1 24678999999999999999999985322     2333333333445553   46


Q ss_pred             CHHHHHHHHHhhhhCCCCCCCHHH
Q psy2648         269 STDCENLLKKFLVLNPAKRASLEV  292 (708)
Q Consensus       269 s~~~~~Li~~~L~~dP~~Rps~~~  292 (708)
                      |+.+..+.++.|..+|++|.-+-+
T Consensus       257 s~~a~r~Fkk~lt~~~~drcki~~  280 (378)
T KOG1345|consen  257 SEKALRLFKKSLTPRFKDRCKIWT  280 (378)
T ss_pred             CHHHHHHHHHhcCCcccccchhHH
Confidence            889999999999999999966543


No 403
>KOG1027|consensus
Probab=99.97  E-value=4.2e-32  Score=304.50  Aligned_cols=232  Identities=27%  Similarity=0.481  Sum_probs=189.0

Q ss_pred             eEEcccCce-EEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEEEeccCC
Q psy2648          52 KTIGKGNFA-KVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTLYLVMEYASG  129 (708)
Q Consensus        52 ~~LG~G~fg-~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ylVmEy~~g  129 (708)
                      +.+|.|+-| .||+|..  .|+.||||.+-..     ....+.+||..|+.- +|||||++|..-.+....||..|.|..
T Consensus       515 eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e-----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~  587 (903)
T KOG1027|consen  515 EILGYGSNGTVVFRGVY--EGREVAVKRLLEE-----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC  587 (903)
T ss_pred             HHcccCCCCcEEEEEee--CCceehHHHHhhH-----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh
Confidence            567888876 4788876  6889999987543     344577999999876 499999999999999999999999975


Q ss_pred             CChHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcC---CC--cEEEEeccCccccCCCC-
Q psy2648         130 GEVFDYLVLHGR----MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS---EM--NIKIADFGFSNEFTPGN-  199 (708)
Q Consensus       130 g~L~~~i~~~~~----l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~---~~--~iKL~DFGls~~~~~~~-  199 (708)
                       +|.+++...+.    ....+.+..+.|+++||++||+.+||||||||.||||+.   ++  .++|+|||+++....+. 
T Consensus       588 -sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s  666 (903)
T KOG1027|consen  588 -SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS  666 (903)
T ss_pred             -hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcc
Confidence             89999976421    111456788999999999999999999999999999986   34  58999999999876543 


Q ss_pred             ---CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHH
Q psy2648         200 ---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPF---YMSTDC  272 (708)
Q Consensus       200 ---~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~~~~p~---~~s~~~  272 (708)
                         ...+..||-.|+|||++..... ..++||+||||++|+.++ |..||.+.-.++  ..|+.+.+.+-.   ....++
T Consensus       667 S~~r~s~~sGt~GW~APE~L~~~~~-~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl~~~~~L~~L~~~~d~eA  743 (903)
T KOG1027|consen  667 SFSRLSGGSGTSGWQAPEQLREDRK-TQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANILTGNYTLVHLEPLPDCEA  743 (903)
T ss_pred             hhhcccCCCCcccccCHHHHhcccc-CcccchhhcCceEEEEecCCccCCCchHHhh--hhhhcCccceeeeccCchHHH
Confidence               3456789999999999987764 468999999999999998 599997754443  468888776422   111289


Q ss_pred             HHHHHHhhhhCCCCCCCHHHHh
Q psy2648         273 ENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       273 ~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      .|||.+||.+||..||++.+++
T Consensus       744 ~dLI~~ml~~dP~~RPsa~~VL  765 (903)
T KOG1027|consen  744 KDLISRMLNPDPQLRPSATDVL  765 (903)
T ss_pred             HHHHHHhcCCCcccCCCHHHHh
Confidence            9999999999999999999887


No 404
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97  E-value=1.1e-29  Score=250.25  Aligned_cols=209  Identities=47%  Similarity=0.780  Sum_probs=183.5

Q ss_pred             EcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCChH
Q psy2648          54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVF  133 (708)
Q Consensus        54 LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ylVmEy~~gg~L~  133 (708)
                      ||+|++|.||++....+++.++||++....... ..+.+.+|+++++.+.|++|+++++++......+++|||+.+++|.
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~   79 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK   79 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence            689999999999998889999999997654321 3467889999999999999999999999999999999999999999


Q ss_pred             HHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcC-CCcEEEEeccCccccCCCC-CccccccCCcc
Q psy2648         134 DYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS-EMNIKIADFGFSNEFTPGN-KLDTFCGSPPY  210 (708)
Q Consensus       134 ~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~-~~~iKL~DFGls~~~~~~~-~~~~~~Gt~~Y  210 (708)
                      +++... ..+++..+..++.|++.+|+|||++|++|+||+|.||+++. ++.++|+|||.+....... ......+...|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~  159 (215)
T cd00180          80 DLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAY  159 (215)
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCc
Confidence            998766 57899999999999999999999999999999999999999 8999999999987654332 13345678899


Q ss_pred             cccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCCCH
Q psy2648         211 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRASL  290 (708)
Q Consensus       211 ~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rps~  290 (708)
                      ++||.+......+.++|+|+||+++|+|                               ..+.+++.+||..||.+||++
T Consensus       160 ~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------~~~~~~l~~~l~~~p~~R~~~  208 (215)
T cd00180         160 MAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------PELKDLIRKMLQKDPEKRPSA  208 (215)
T ss_pred             cChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------HHHHHHHHHHhhCCcccCcCH
Confidence            9999997752335789999999999999                               678999999999999999999


Q ss_pred             HHHh
Q psy2648         291 EVSG  294 (708)
Q Consensus       291 ~~~~  294 (708)
                      +++.
T Consensus       209 ~~l~  212 (215)
T cd00180         209 KEIL  212 (215)
T ss_pred             HHHh
Confidence            8764


No 405
>KOG1290|consensus
Probab=99.97  E-value=1.9e-30  Score=276.28  Aligned_cols=129  Identities=25%  Similarity=0.474  Sum_probs=113.6

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-----C---CCeeeEEEEEEeC
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-----H---PNIVKLFQVIETE  117 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-----H---pnIv~l~~~~~~~  117 (708)
                      ++|.+.++||-|.|++||||.+....+.||+|+.+..+   ...+..+.||++|++++     |   .+||+|++.|...
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq---hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs  154 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ---HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS  154 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh---HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence            79999999999999999999999999999999987543   34456789999999873     3   3699999999753


Q ss_pred             ----CEEEEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCCEEE
Q psy2648         118 ----KTLYLVMEYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLL  178 (708)
Q Consensus       118 ----~~~ylVmEy~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~-~gIvHRDLKPeNILl  178 (708)
                          .+++||+|++ |.+|+.+|...  ..++...++.|++||+.||.|||. .||||-|||||||||
T Consensus       155 GpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl  221 (590)
T KOG1290|consen  155 GPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL  221 (590)
T ss_pred             CCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence                5899999998 66899998765  469999999999999999999996 599999999999996


No 406
>KOG0616|consensus
Probab=99.97  E-value=2e-31  Score=269.04  Aligned_cols=174  Identities=33%  Similarity=0.479  Sum_probs=139.3

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....||.+|+|+..|.+...+||||||++||.|+.++++.++|+|..|++|++||+.||+|||+++||+|||||||||+|
T Consensus        99 ~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD  178 (355)
T KOG0616|consen   99 KAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLD  178 (355)
T ss_pred             hhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeec
Confidence            45679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccCCCCcccccccCCcccccccccCCCCccCCCCCCCC-CcccCCCCCCCccc-----ccccc---
Q psy2648         547 SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTN-HTHNSSISPAPTNF-----KRQNT---  617 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~-~~~~~~~~~~~~~~-----~~~~~---  617 (708)
                      ..|++||+|||+|+.....  ..+.||||.|+|||++++.. +..+..++.. -+-+.+..+-+..+     .....   
T Consensus       179 ~~G~iKitDFGFAK~v~~r--T~TlCGTPeYLAPEii~sk~-ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~  255 (355)
T KOG0616|consen  179 QNGHIKITDFGFAKRVSGR--TWTLCGTPEYLAPEIIQSKG-YNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILE  255 (355)
T ss_pred             cCCcEEEEeccceEEecCc--EEEecCCccccChHHhhcCC-CCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHh
Confidence            9999999999999987543  66889999999999998655 4444433321 11111111111111     11111   


Q ss_pred             -------ccccchhhhHHHHhhCCCCCCCCCCC
Q psy2648         618 -------IDSASIKENTARLNAGRPAKNTASIA  643 (708)
Q Consensus       618 -------~~~~~~~~~~~~~~~~~~~~~~~~~~  643 (708)
                             .-+..++|++..|+.-+-++|.|...
T Consensus       256 ~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlk  288 (355)
T KOG0616|consen  256 GKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLK  288 (355)
T ss_pred             CcccCCcccCHHHHHHHHHHHhhhhHhhhcCcC
Confidence                   12788999999999988888866554


No 407
>KOG0615|consensus
Probab=99.96  E-value=4.3e-30  Score=269.33  Aligned_cols=176  Identities=27%  Similarity=0.441  Sum_probs=144.8

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....||+||+++++|+.++..||||||++||+|++.+..++.+.|+..+.+++|++.||.|||++||+||||||||||+.
T Consensus       231 kkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~  310 (475)
T KOG0615|consen  231 KKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLS  310 (475)
T ss_pred             HhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEec
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CC---CCEEEeeccCccccCCCCcccccccCCcccccccccCCC--------CccCCCCCCCCCcccCCCCCCCc-----
Q psy2648         547 SE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGA--------PVTSSGGAGTNHTHNSSISPAPT-----  610 (708)
Q Consensus       547 ~~---~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~--------~~~~s~~~~~~~~~~~~~~~~~~-----  610 (708)
                      .+   ..+||+|||+|+.......+.++||||.|.||||+.+..        ..|+.|...+-.+.+.+++...+     
T Consensus       311 ~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl  390 (475)
T KOG0615|consen  311 NDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSL  390 (475)
T ss_pred             cCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccH
Confidence            76   679999999999998888899999999999999998542        23455655555555544432222     


Q ss_pred             ---------cc-cccccccccchhhhHHHHhhCCCCCCCCCC
Q psy2648         611 ---------NF-KRQNTIDSASIKENTARLNAGRPAKNTASI  642 (708)
Q Consensus       611 ---------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  642 (708)
                               .| +-+-.--+-.++++..+++.=.|..|-...
T Consensus       391 ~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~  432 (475)
T KOG0615|consen  391 KEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSAD  432 (475)
T ss_pred             HHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHH
Confidence                     12 122222266788888888888888775443


No 408
>KOG1024|consensus
Probab=99.96  E-value=3.4e-29  Score=260.17  Aligned_cols=247  Identities=21%  Similarity=0.373  Sum_probs=207.4

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcCCC-----cEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEE-EeCCE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVPTG-----KEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVI-ETEKT  119 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~tg-----~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~-~~~~~  119 (708)
                      .++++...+-+|.||+||.|.++...     +.|-+|.++. ..++-+...++.|...+..+.|||+..+..+. ++...
T Consensus       284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~-~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~  362 (563)
T KOG1024|consen  284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQ-HASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYAT  362 (563)
T ss_pred             hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHh-cccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCc
Confidence            46888889999999999999876433     3466676643 23444566788999999999999999999885 45567


Q ss_pred             EEEEEeccCCCChHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccC
Q psy2648         120 LYLVMEYASGGEVFDYLVLHG--------RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF  191 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~--------~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGl  191 (708)
                      .+++..+..-|+|..|+....        .++..+...++.||+.|++|||++||||.||...|.+||+.-.+||+|-.|
T Consensus       363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaL  442 (563)
T KOG1024|consen  363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSAL  442 (563)
T ss_pred             ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchh
Confidence            788899999999999997321        366778888999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCc---cccccCCcccccccccCCccCCCchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCC
Q psy2648         192 SNEFTPGNKL---DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK-YRIPF  266 (708)
Q Consensus       192 s~~~~~~~~~---~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyellt-G~~Pf~~~~~~~l~~~i~~~~-~~~p~  266 (708)
                      ++..-++...   +.---...||+||.++...|+ .++|+|||||+||||+| |+.||...++.|+...++.|. ...|.
T Consensus       443 SRDLFP~DYhcLGDnEnRPvkWMslEal~n~~ys-sasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP~  521 (563)
T KOG1024|consen  443 SRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYS-SASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQPF  521 (563)
T ss_pred             ccccCcccccccCCCCCCcccccCHHHHhhhhhc-chhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecCCC
Confidence            9876554321   111234579999999999986 78999999999999998 999999999999998888873 35689


Q ss_pred             CCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         267 YMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       267 ~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ++++++-.++..||..+|++||+++|+.
T Consensus       522 NCPDeLf~vMacCWallpeeRPsf~Qlv  549 (563)
T KOG1024|consen  522 NCPDELFTVMACCWALLPEERPSFSQLV  549 (563)
T ss_pred             CCcHHHHHHHHHHHhcCcccCCCHHHHH
Confidence            9999999999999999999999999875


No 409
>KOG0581|consensus
Probab=99.96  E-value=1.7e-29  Score=263.18  Aligned_cols=168  Identities=27%  Similarity=0.430  Sum_probs=141.7

Q ss_pred             ccCCCCCCCCCCcCCCccccccccccccc----cCcc----------cccccccCceeEEEEEEEeCC-EEEEEEeccCC
Q psy2648         432 TGGSGGGGGGGAAQSPSHRGVHRSISASN----AKPS----------RRASSGGETLLKLFQVIETEK-TLYLVMEYASG  496 (708)
Q Consensus       432 ~~~~~ggg~~g~v~s~~hr~~~R~i~~~~----~~~~----------~~~~~~~~~Iv~L~~~~~~~~-~~yLVmEy~~g  496 (708)
                      ..+..|.|.+|.|+.+.|+..++.-..+.    .++.          ......+|+||++|+.|..+. .++|+||||++
T Consensus        83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDg  162 (364)
T KOG0581|consen   83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDG  162 (364)
T ss_pred             hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCC
Confidence            35667888888999888887665322221    1111          123458999999999999999 59999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeecCCCCEEEeeccCccccCCCCcccccccCC
Q psy2648         497 GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP  575 (708)
Q Consensus       497 g~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~-~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~Gt~  575 (708)
                      |+|.+.+...++++|.....++.+|++||.|||+ ++||||||||+|||++..|+|||||||+|+.+... ..++++||.
T Consensus       163 GSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-~a~tfvGT~  241 (364)
T KOG0581|consen  163 GSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-IANTFVGTS  241 (364)
T ss_pred             CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-hcccccccc
Confidence            9999999999999999999999999999999995 99999999999999999999999999999987655 668999999


Q ss_pred             cccccccccCCCCccCCCCCCCCCc
Q psy2648         576 PYAAPELFQGGAPVTSSGGAGTNHT  600 (708)
Q Consensus       576 ~Y~APEvl~g~~~~~~s~~~~~~~~  600 (708)
                      .|||||.+.|+.+..+++-|+.+++
T Consensus       242 ~YMsPERi~g~~Ys~~sDIWSLGLs  266 (364)
T KOG0581|consen  242 AYMSPERISGESYSVKSDIWSLGLS  266 (364)
T ss_pred             cccChhhhcCCcCCcccceecccHH
Confidence            9999999999987777766654443


No 410
>KOG0583|consensus
Probab=99.96  E-value=4.9e-29  Score=272.02  Aligned_cols=168  Identities=38%  Similarity=0.633  Sum_probs=139.1

Q ss_pred             cCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCC-C
Q psy2648         471 GETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE-M  549 (708)
Q Consensus       471 ~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~-~  549 (708)
                      ||||+++++++++...+|+|||||.||+|++++...+++.|.+++.+|+||+.||.|||++||+||||||||||++.+ +
T Consensus        79 HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~  158 (370)
T KOG0583|consen   79 HPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEG  158 (370)
T ss_pred             CCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999999 9


Q ss_pred             CEEEeeccCcccc-CCCCcccccccCCcccccccccCCC-CccCCCCCC------CCCcccCCCCCCCc-----------
Q psy2648         550 NIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGGA-PVTSSGGAG------TNHTHNSSISPAPT-----------  610 (708)
Q Consensus       550 ~vKl~DFGla~~~-~~~~~~~~~~Gt~~Y~APEvl~g~~-~~~~s~~~~------~~~~~~~~~~~~~~-----------  610 (708)
                      ++||+|||++... .......++|||+.|+|||++.+.. +.......+      +..+.+..+.....           
T Consensus       159 ~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~  238 (370)
T KOG0583|consen  159 NLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG  238 (370)
T ss_pred             CEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC
Confidence            9999999999988 5677889999999999999999866 332322222      22222222222211           


Q ss_pred             --cccccccccccchhhhHHHHhhCCCCCCCC
Q psy2648         611 --NFKRQNTIDSASIKENTARLNAGRPAKNTA  640 (708)
Q Consensus       611 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  640 (708)
                        .++....  |+.+++++.+++.-.|.+|.-
T Consensus       239 ~~~~p~~~~--S~~~~~Li~~mL~~~P~~R~t  268 (370)
T KOG0583|consen  239 EFKIPSYLL--SPEARSLIEKMLVPDPSTRIT  268 (370)
T ss_pred             CccCCCCcC--CHHHHHHHHHHcCCCcccCCC
Confidence              1222222  888999999999999998653


No 411
>KOG0592|consensus
Probab=99.96  E-value=3.1e-29  Score=270.54  Aligned_cols=175  Identities=30%  Similarity=0.488  Sum_probs=145.4

Q ss_pred             ccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecC
Q psy2648         468 SSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS  547 (708)
Q Consensus       468 ~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~  547 (708)
                      .++||.||+||..|+++..+|+|+||+++|||.++|++.|.|+|..+++|++||+.||+|||++|||||||||||||||.
T Consensus       130 L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~  209 (604)
T KOG0592|consen  130 LSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDK  209 (604)
T ss_pred             hhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcC
Confidence            45999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEeeccCccccCCCC--------------cccccccCCcccccccccCCCCccCCCCCCCCCcccCCC-----CCC
Q psy2648         548 EMNIKIADFGFSNEFTPGN--------------KLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSI-----SPA  608 (708)
Q Consensus       548 ~~~vKl~DFGla~~~~~~~--------------~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~-----~~~  608 (708)
                      ++++||+|||-|+.+.+..              ...+++||..|++||+|.......+++-|+.+++.+-++     +.+
T Consensus       210 dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra  289 (604)
T KOG0592|consen  210 DGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRA  289 (604)
T ss_pred             CCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcc
Confidence            9999999999998765321              125699999999999999887777777666666655443     333


Q ss_pred             Ccccc-----cccccc-----ccchhhhHHHHhhCCCCCCCCCC
Q psy2648         609 PTNFK-----RQNTID-----SASIKENTARLNAGRPAKNTASI  642 (708)
Q Consensus       609 ~~~~~-----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  642 (708)
                      .+.+.     ....++     ...+.++..+|+.-+|.+|++..
T Consensus       290 ~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~  333 (604)
T KOG0592|consen  290 ANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQ  333 (604)
T ss_pred             ccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHH
Confidence            33211     011111     57889999999999999887763


No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.96  E-value=6.1e-27  Score=243.76  Aligned_cols=244  Identities=38%  Similarity=0.654  Sum_probs=206.6

Q ss_pred             eEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChh-hHHHHHHHHHHHHhCCCC-CeeeEEEEEEeCCEEEEEEe
Q psy2648          48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG-SLQKLFREVRIMKMLDHP-NIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        48 Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~-~~~~~~~Ei~il~~l~Hp-nIv~l~~~~~~~~~~ylVmE  125 (708)
                      |.+.+.||.|+||.||++.+.   ..+|+|.+.+...... ....+.+|+.++..+.|+ +|+++++.+......++++|
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   78 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME   78 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence            889999999999999999987   8899999987654432 567789999999999988 79999999988888999999


Q ss_pred             ccCCCChHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCC-cEEEEeccCccccCCCC--
Q psy2648         126 YASGGEVFDYLVLHG---RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGN--  199 (708)
Q Consensus       126 y~~gg~L~~~i~~~~---~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~-~iKL~DFGls~~~~~~~--  199 (708)
                      |+.+++|.+++....   .+.+..+..++.|++.++.|+|+.+++|||+||+|||++..+ .++++|||++..+....  
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~  158 (384)
T COG0515          79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST  158 (384)
T ss_pred             cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence            999999998777665   799999999999999999999999999999999999999998 69999999987554332  


Q ss_pred             -----CccccccCCcccccccccCC--ccCCCchhHHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHcCCCC-CCCC
Q psy2648         200 -----KLDTFCGSPPYAAPELFQGK--KYDGPEVDVWSLGVILYTLVSGSLPFDGST----LRELRERVLRGKYR-IPFY  267 (708)
Q Consensus       200 -----~~~~~~Gt~~Y~APE~l~~~--~~~~~~~DIWSlGvilyelltG~~Pf~~~~----~~~l~~~i~~~~~~-~p~~  267 (708)
                           .....+||..|+|||.+.+.  .+.....|+||+|++++++++|..||....    .......+...... .+..
T Consensus       159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (384)
T COG0515         159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP  238 (384)
T ss_pred             ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc
Confidence                 34678999999999999874  344578999999999999999999998776    35666666555433 2222


Q ss_pred             CC--------HHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         268 MS--------TDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       268 ~s--------~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      ..        ..+.+++.+++..+|..|.+.....
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~  273 (384)
T COG0515         239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDL  273 (384)
T ss_pred             cCccccchhhHHHHHHHHHHHhcCchhcCCHHHHh
Confidence            11        4789999999999999999987544


No 413
>KOG0588|consensus
Probab=99.95  E-value=5.9e-29  Score=273.22  Aligned_cols=174  Identities=39%  Similarity=0.598  Sum_probs=144.2

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....||||+.||+++++..++|||+||++||.|++++.++|+++|.+++.+++||+.|+.|||..+|+||||||||+|||
T Consensus        67 kLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd  146 (786)
T KOG0588|consen   67 KLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLD  146 (786)
T ss_pred             HHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhh
Confidence            34689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccCCCCcccccccCCcccccccccCCCCccCCCCCC-CCCcccCCCCCCCcc----------cccc
Q psy2648         547 SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAG-TNHTHNSSISPAPTN----------FKRQ  615 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~-~~~~~~~~~~~~~~~----------~~~~  615 (708)
                      ..+++||+|||+|..-.++..+.+.||+|+|.|||++.|..+......++ ++-.+++...+....          -+.+
T Consensus       147 ~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~  226 (786)
T KOG0588|consen  147 VKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQR  226 (786)
T ss_pred             cccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHc
Confidence            99999999999999888888999999999999999999887655444333 333333332222220          0122


Q ss_pred             cccc-----ccchhhhHHHHhhCCCCCCCC
Q psy2648         616 NTID-----SASIKENTARLNAGRPAKNTA  640 (708)
Q Consensus       616 ~~~~-----~~~~~~~~~~~~~~~~~~~~~  640 (708)
                      ..++     +..+++++.|++.=+|+++.-
T Consensus       227 G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT  256 (786)
T KOG0588|consen  227 GVFEMPSNISSEAQDLLRRMLDVDPSTRIT  256 (786)
T ss_pred             CcccCCCcCCHHHHHHHHHHhccCcccccc
Confidence            2222     778899999988888887754


No 414
>KOG0590|consensus
Probab=99.95  E-value=7.4e-30  Score=293.28  Aligned_cols=254  Identities=29%  Similarity=0.484  Sum_probs=204.9

Q ss_pred             cCCe-EEEeEEcccCceEEEEEEEcCCCcEEEEEEecc----CCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE
Q psy2648          45 IGKY-KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK----TQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT  119 (708)
Q Consensus        45 ~~~Y-~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~----~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  119 (708)
                      ...| .....+|.|+||.|+.+......+.++.|....    ..........+..|..+-..|.||||+..+..+.....
T Consensus       316 ~~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~  395 (601)
T KOG0590|consen  316 SEKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG  395 (601)
T ss_pred             ccccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc
Confidence            3456 456789999999999998887777777775542    11111122236678888889999999988887777766


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCC-
Q psy2648         120 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-  198 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~-  198 (708)
                      ++-+||||++ ||+.++...+.+...++..+|+||+.||+|||++||.||||||+|+|+..+|.+||+|||.+..+.-+ 
T Consensus       396 ~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~  474 (601)
T KOG0590|consen  396 ILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW  474 (601)
T ss_pred             chhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence            6667999999 99999988889999999999999999999999999999999999999999999999999998766432 


Q ss_pred             ----CCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHH-------HHcCCCCCC
Q psy2648         199 ----NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLREL--RER-------VLRGKYRIP  265 (708)
Q Consensus       199 ----~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l--~~~-------i~~~~~~~p  265 (708)
                          .....++|+.+|+|||++.+..|+...+||||.||+++.|++|+.||.-....+-  .+.       +..|..++-
T Consensus       475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~  554 (601)
T KOG0590|consen  475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLL  554 (601)
T ss_pred             chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHH
Confidence                2346789999999999999999999999999999999999999999975433221  111       112222222


Q ss_pred             CCCCHHHHHHHHHhhhhCCCCCCCHHHHh---hhhhC
Q psy2648         266 FYMSTDCENLLKKFLVLNPAKRASLEVSG---EVTLG  299 (708)
Q Consensus       266 ~~~s~~~~~Li~~~L~~dP~~Rps~~~~~---~~~~~  299 (708)
                      ..++.+++.+|.+||++||.+|.|+++|+   |++..
T Consensus       555 ~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  555 SLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI  591 (601)
T ss_pred             HhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence            34678899999999999999999999998   98753


No 415
>KOG0575|consensus
Probab=99.95  E-value=5.3e-29  Score=272.92  Aligned_cols=181  Identities=30%  Similarity=0.458  Sum_probs=147.9

Q ss_pred             cccccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCee
Q psy2648         465 RRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL  544 (708)
Q Consensus       465 ~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NIL  544 (708)
                      ...+..|||||++|++|++.+++|||+|+|+.++|..++++++.++|.+|+.|++||+.||.|||+++|||||||..|++
T Consensus        71 IHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlf  150 (592)
T KOG0575|consen   71 IHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLF  150 (592)
T ss_pred             HHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhhee
Confidence            34678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCCEEEeeccCccccC-CCCcccccccCCcccccccccCCCC-----ccCCCCCCCCCcccCCCCCCCc-----ccc
Q psy2648         545 LDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGGAP-----VTSSGGAGTNHTHNSSISPAPT-----NFK  613 (708)
Q Consensus       545 l~~~~~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~APEvl~g~~~-----~~~s~~~~~~~~~~~~~~~~~~-----~~~  613 (708)
                      |+.+.+|||+|||||..+. +++...+.||||.|+||||+.....     .|+.|.+-+.++.+.+++-.-.     ...
T Consensus       151 L~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~I  230 (592)
T KOG0575|consen  151 LNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKI  230 (592)
T ss_pred             ecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHH
Confidence            9999999999999999886 4477889999999999999986543     4444444444444433332111     011


Q ss_pred             ccccc-----cccchhhhHHHHhhCCCCCCCCCCCCc
Q psy2648         614 RQNTI-----DSASIKENTARLNAGRPAKNTASIAPL  645 (708)
Q Consensus       614 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  645 (708)
                      .++..     -|..++++.+.|+.-.|.+|..-.+.+
T Consensus       231 k~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL  267 (592)
T KOG0575|consen  231 KLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVL  267 (592)
T ss_pred             HhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence            22222     278899999999999999886554444


No 416
>KOG0694|consensus
Probab=99.95  E-value=1.3e-29  Score=280.45  Aligned_cols=208  Identities=29%  Similarity=0.395  Sum_probs=157.6

Q ss_pred             cCCCCCCCCCCcCCCccccccccccccccC-----cc------------cccccccCceeEEEEEEEeCCEEEEEEeccC
Q psy2648         433 GGSGGGGGGGAAQSPSHRGVHRSISASNAK-----PS------------RRASSGGETLLKLFQVIETEKTLYLVMEYAS  495 (708)
Q Consensus       433 ~~~~ggg~~g~v~s~~hr~~~R~i~~~~~~-----~~------------~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~  495 (708)
                      ....|.|.||.|.....++....-..+..+     ..            ......||.+++||..|++++++|+||||+.
T Consensus       373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~  452 (694)
T KOG0694|consen  373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVA  452 (694)
T ss_pred             EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecC
Confidence            556788999988777665554421111100     00            1122489999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCCCEEEeeccCccccC-CCCcccccccC
Q psy2648         496 GGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGS  574 (708)
Q Consensus       496 gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~-~~~~~~~~~Gt  574 (708)
                      |||++ ++...+.|+|..+++|+++|+.||+|||++||||||||.+|||||.+|++||+|||+++... .+..+.++|||
T Consensus       453 Ggdm~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGT  531 (694)
T KOG0694|consen  453 GGDLM-HHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGT  531 (694)
T ss_pred             CCcEE-EEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCccccccCC
Confidence            99944 45555789999999999999999999999999999999999999999999999999999754 67788999999


Q ss_pred             CcccccccccCCCCccCCCCCCCCCc------ccCCCCCCCcc---c-------cccccccccchhhhHHHHhhCCCCCC
Q psy2648         575 PPYAAPELFQGGAPVTSSGGAGTNHT------HNSSISPAPTN---F-------KRQNTIDSASIKENTARLNAGRPAKN  638 (708)
Q Consensus       575 ~~Y~APEvl~g~~~~~~s~~~~~~~~------~~~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  638 (708)
                      |.|||||++.+.. |+.+..|+....      .+-++.++-..   |       ++.-..-|..+-.++.||+...|.++
T Consensus       532 pey~aPEil~e~~-Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kR  610 (694)
T KOG0694|consen  532 PEFLAPEVLTEQS-YTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKR  610 (694)
T ss_pred             hhhcChhhhccCc-ccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccc
Confidence            9999999998877 455544443221      12222232221   1       01111127888899999999999999


Q ss_pred             CCCC
Q psy2648         639 TASI  642 (708)
Q Consensus       639 ~~~~  642 (708)
                      +|+.
T Consensus       611 LG~~  614 (694)
T KOG0694|consen  611 LGSG  614 (694)
T ss_pred             cCCC
Confidence            9996


No 417
>KOG0593|consensus
Probab=99.95  E-value=2.3e-29  Score=254.55  Aligned_cols=182  Identities=24%  Similarity=0.421  Sum_probs=151.8

Q ss_pred             CCCCCCCCCcCCCccccccccccccc-cCcc--------------cccccccCceeEEEEEEEeCCEEEEEEeccCCCCH
Q psy2648         435 SGGGGGGGAAQSPSHRGVHRSISASN-AKPS--------------RRASSGGETLLKLFQVIETEKTLYLVMEYASGGEV  499 (708)
Q Consensus       435 ~~ggg~~g~v~s~~hr~~~R~i~~~~-~~~~--------------~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L  499 (708)
                      ..|.|..|.|...+++..++-...+. .+..              ......|||+|.|.++|.....+|||+|||+..-|
T Consensus         9 kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL   88 (396)
T KOG0593|consen    9 KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVL   88 (396)
T ss_pred             ccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHHH
Confidence            35667778777777766655322211 1111              11346899999999999999999999999998666


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCCCEEEeeccCccccC-CCCcccccccCCccc
Q psy2648         500 FDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYA  578 (708)
Q Consensus       500 ~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~  578 (708)
                      .+.-.....++++.++.|++|++.|+.|||+++||||||||||||++..|.+||||||+|+.+. ++...+.++.|.||+
T Consensus        89 ~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYR  168 (396)
T KOG0593|consen   89 HELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYR  168 (396)
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhcc
Confidence            5555555679999999999999999999999999999999999999999999999999999886 777888899999999


Q ss_pred             ccccccCCCCccCCCCCCCCCcccCCCCCCCccccccccccccchhhhHHHHhhCCCCCCCCC
Q psy2648         579 APELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASIKENTARLNAGRPAKNTAS  641 (708)
Q Consensus       579 APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  641 (708)
                      |||++.|...|..+                         +|.|.++|+.++|..|+|==++-|
T Consensus       169 aPELLvGDtqYG~p-------------------------VDiWAiGCv~aEl~~G~pL~PG~S  206 (396)
T KOG0593|consen  169 APELLVGDTQYGKP-------------------------VDIWAIGCVFAELLTGEPLWPGRS  206 (396)
T ss_pred             ChhhhcccCcCCCc-------------------------ccchhhhHHHHHHhcCCcCCCCcc
Confidence            99999999988888                         899999999999999998654444


No 418
>KOG0605|consensus
Probab=99.95  E-value=5.1e-29  Score=269.20  Aligned_cols=206  Identities=26%  Similarity=0.371  Sum_probs=151.6

Q ss_pred             CCCCCCCCCcCCCcccccccccccc----------------ccCcccccccccCceeEEEEEEEeCCEEEEEEeccCCCC
Q psy2648         435 SGGGGGGGAAQSPSHRGVHRSISAS----------------NAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGGE  498 (708)
Q Consensus       435 ~~ggg~~g~v~s~~hr~~~R~i~~~----------------~~~~~~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~  498 (708)
                      .-|.|++|-|..+..+..+..-..+                .++-........+.||+||..|++.+++||||||++|||
T Consensus       148 ~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD  227 (550)
T KOG0605|consen  148 VIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGD  227 (550)
T ss_pred             eeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCcc
Confidence            3466777777666655544321111                112223355788999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCCCEEEeeccCccccCC--------------
Q psy2648         499 VFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP--------------  564 (708)
Q Consensus       499 L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~--------------  564 (708)
                      +..+|.+.+.|+|+++++|+++++.|+.-+|+.|+|||||||+|+|||..|++||+||||+.-+..              
T Consensus       228 ~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~  307 (550)
T KOG0605|consen  228 MMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQ  307 (550)
T ss_pred             HHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhh
Confidence            999999999999999999999999999999999999999999999999999999999999742110              


Q ss_pred             --------C--C------------------------cccccccCCcccccccccCCCCccCCCCCCCCCcccCCCC--CC
Q psy2648         565 --------G--N------------------------KLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSIS--PA  608 (708)
Q Consensus       565 --------~--~------------------------~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~--~~  608 (708)
                              .  .                        ...+++|||-||||||+.+..+.-..+-|+.+++.+....  |+
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPP  387 (550)
T KOG0605|consen  308 INLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPP  387 (550)
T ss_pred             hhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCC
Confidence                    0  0                        0124789999999999998774333333332322222211  11


Q ss_pred             Ccc------------------ccccccccccchhhhHHHHhhCCCCCCCCCC
Q psy2648         609 PTN------------------FKRQNTIDSASIKENTARLNAGRPAKNTASI  642 (708)
Q Consensus       609 ~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  642 (708)
                      ...                  |+....+ +..++|+..||+. .|++++|++
T Consensus       388 F~s~tp~~T~rkI~nwr~~l~fP~~~~~-s~eA~DLI~rll~-d~~~RLG~~  437 (550)
T KOG0605|consen  388 FCSETPQETYRKIVNWRETLKFPEEVDL-SDEAKDLITRLLC-DPENRLGSK  437 (550)
T ss_pred             CCCCCHHHHHHHHHHHhhhccCCCcCcc-cHHHHHHHHHHhc-CHHHhcCcc
Confidence            110                  2222222 5789999999999 999999943


No 419
>KOG1167|consensus
Probab=99.95  E-value=1.3e-28  Score=259.66  Aligned_cols=242  Identities=29%  Similarity=0.481  Sum_probs=192.7

Q ss_pred             CCeEEEeEEcccCceEEEEEEEcC---CCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEE
Q psy2648          46 GKYKLLKTIGKGNFAKVKLAKHVP---TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEKTLY  121 (708)
Q Consensus        46 ~~Y~i~~~LG~G~fg~V~la~~~~---tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~y  121 (708)
                      ..|.+..+||+|+|+.||+|....   ..+.||+|.|.....    ..++..|+++|..+. +.||+.+.+.+..++.+.
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~  111 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA  111 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhccCCeeE
Confidence            468999999999999999999887   789999999976543    346889999999885 899999999999999999


Q ss_pred             EEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCC-CcEEEEeccCccccC----
Q psy2648         122 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE-MNIKIADFGFSNEFT----  196 (708)
Q Consensus       122 lVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~-~~iKL~DFGls~~~~----  196 (708)
                      +||||++.-+..++..   .++-.+++.|++.++.||.++|.+|||||||||.|+|.+.. +.-.|+||||+....    
T Consensus       112 ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~  188 (418)
T KOG1167|consen  112 IVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQ  188 (418)
T ss_pred             EEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhh
Confidence            9999999988877765   56789999999999999999999999999999999999865 556899999986210    


Q ss_pred             -------------C--CCC---------------c-----------cccccCCcccccccccCCccCCCchhHHHHHHHH
Q psy2648         197 -------------P--GNK---------------L-----------DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL  235 (708)
Q Consensus       197 -------------~--~~~---------------~-----------~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvil  235 (708)
                                   +  +..               .           -...||+.|.|||++...+-.++++||||.|||+
T Consensus       189 ~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~  268 (418)
T KOG1167|consen  189 TEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVIL  268 (418)
T ss_pred             hhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecccee
Confidence                         0  000               0           0134999999999998877667899999999999


Q ss_pred             HHHHcCCCCCCCCCH--------------HHHHHH-HHcCC------CCCC-----------------------------
Q psy2648         236 YTLVSGSLPFDGSTL--------------RELRER-VLRGK------YRIP-----------------------------  265 (708)
Q Consensus       236 yelltG~~Pf~~~~~--------------~~l~~~-i~~~~------~~~p-----------------------------  265 (708)
                      .-++++.+||.....              .++.+. ...|.      -.+|                             
T Consensus       269 Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~  348 (418)
T KOG1167|consen  269 LSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREI  348 (418)
T ss_pred             ehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecc
Confidence            999999999964211              111110 00111      0000                             


Q ss_pred             --CCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         266 --FYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       266 --~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                        ...+..+.||+.+||+.||.+|+|+|+.+
T Consensus       349 ~~d~~~~~~~dlLdk~le~np~kRitAEeAL  379 (418)
T KOG1167|consen  349 GSDVFPALLLDLLDKCLELNPQKRITAEDAL  379 (418)
T ss_pred             ccccccHHHHHHHHHHccCChhhcccHHHHh
Confidence              01234688999999999999999999765


No 420
>KOG0611|consensus
Probab=99.95  E-value=3.4e-28  Score=253.22  Aligned_cols=124  Identities=50%  Similarity=0.889  Sum_probs=118.7

Q ss_pred             ccccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeee
Q psy2648         466 RASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL  545 (708)
Q Consensus       466 ~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl  545 (708)
                      ..+.+||||+.+|++|+..+.+.|||||.++|+|+++|.+++.|+|.+++.+|+||++|+.|||.++|+|||||.+|||+
T Consensus       107 MSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL  186 (668)
T KOG0611|consen  107 MSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL  186 (668)
T ss_pred             HhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee
Confidence            36789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCEEEeeccCccccCCCCcccccccCCcccccccccCCCCc
Q psy2648         546 DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPV  589 (708)
Q Consensus       546 ~~~~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~~  589 (708)
                      |.++++||+||||+..+.....+.+|||+|-|.+||++.|..+.
T Consensus       187 D~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~  230 (668)
T KOG0611|consen  187 DQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYK  230 (668)
T ss_pred             cCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCC
Confidence            99999999999999998888889999999999999999876543


No 421
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95  E-value=2.5e-28  Score=293.09  Aligned_cols=193  Identities=18%  Similarity=0.159  Sum_probs=143.5

Q ss_pred             hCCC-CCeeeEEEEE-------EeCCEEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Q psy2648         101 MLDH-PNIVKLFQVI-------ETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDL  171 (708)
Q Consensus       101 ~l~H-pnIv~l~~~~-------~~~~~~ylVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDL  171 (708)
                      .++| +||.+++++|       .....++++|||+ +++|.++|... ..+++.+++.++.||+.||+|||++||+||||
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl  106 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV  106 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence            4456 5888888877       2234678889987 56999999653 46999999999999999999999999999999


Q ss_pred             CCCCEEEcC-------------------CCcEEEEeccCccccCCC-----------------CCccccccCCccccccc
Q psy2648         172 KAENLLLDS-------------------EMNIKIADFGFSNEFTPG-----------------NKLDTFCGSPPYAAPEL  215 (708)
Q Consensus       172 KPeNILld~-------------------~~~iKL~DFGls~~~~~~-----------------~~~~~~~Gt~~Y~APE~  215 (708)
                      ||+||||+.                   ++.+||+|||+++.....                 ......+||+.|||||+
T Consensus       107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~  186 (793)
T PLN00181        107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE  186 (793)
T ss_pred             CchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence            999999965                   445666666666532100                 00012468899999999


Q ss_pred             ccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR-IPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       216 l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~-~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                      +.+..| +.++|||||||+||||++|..||....  .....+.....+ .+....++..+++.+||.+||.+||++.++.
T Consensus       187 ~~~~~~-~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil  263 (793)
T PLN00181        187 DNGSSS-NCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELL  263 (793)
T ss_pred             hccCCC-CchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHh
Confidence            998888 489999999999999999999876422  122222211111 1112356778999999999999999999987


Q ss_pred             ---hhh
Q psy2648         295 ---EVT  297 (708)
Q Consensus       295 ---~~~  297 (708)
                         |+.
T Consensus       264 ~h~~~~  269 (793)
T PLN00181        264 QSEFIN  269 (793)
T ss_pred             hchhhh
Confidence               664


No 422
>KOG0599|consensus
Probab=99.94  E-value=5.3e-28  Score=241.25  Aligned_cols=152  Identities=39%  Similarity=0.656  Sum_probs=132.1

Q ss_pred             cccccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCee
Q psy2648         465 RRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL  544 (708)
Q Consensus       465 ~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NIL  544 (708)
                      .++.++||+|++|+++|+++..+++|+|+|+.|+|+++|...-.++|.+++.+|+|++.|+.|||.++||||||||||||
T Consensus        76 LRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENIL  155 (411)
T KOG0599|consen   76 LRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENIL  155 (411)
T ss_pred             HHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhhee
Confidence            34678999999999999999999999999999999999999989999999999999999999999999999999999999


Q ss_pred             ecCCCCEEEeeccCccccCCCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCccccccccccccchh
Q psy2648         545 LDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASIK  624 (708)
Q Consensus       545 l~~~~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  624 (708)
                      +|++.++||+|||+|+.+.++..+...||||.|+|||.+...-+-+.-|..                    .-+|.|..+
T Consensus       156 lddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs--------------------~EVD~Wa~G  215 (411)
T KOG0599|consen  156 LDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYS--------------------KEVDEWACG  215 (411)
T ss_pred             eccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCcc--------------------chhhHHHHH
Confidence            999999999999999999999999999999999999999754432222211                    115556666


Q ss_pred             hhHHHHhhCCCC
Q psy2648         625 ENTARLNAGRPA  636 (708)
Q Consensus       625 ~~~~~~~~~~~~  636 (708)
                      -.+=-|++|+|+
T Consensus       216 VImyTLLaGcpP  227 (411)
T KOG0599|consen  216 VIMYTLLAGCPP  227 (411)
T ss_pred             HHHHHHHcCCCc
Confidence            666666777665


No 423
>KOG0600|consensus
Probab=99.94  E-value=1.4e-27  Score=255.90  Aligned_cols=145  Identities=28%  Similarity=0.529  Sum_probs=130.1

Q ss_pred             ccccccCceeEEEEEEEeC--CEEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCC
Q psy2648         466 RASSGGETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN  542 (708)
Q Consensus       466 ~~~~~~~~Iv~L~~~~~~~--~~~yLVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~N  542 (708)
                      .....|||||+|.+...+.  ..+|||+|||+. ||.-++...+ .|++.+++.||.||+.||.|||++||+|||||..|
T Consensus       170 Lr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SN  248 (560)
T KOG0600|consen  170 LRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSN  248 (560)
T ss_pred             HHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccc
Confidence            3567999999999998877  689999999987 8888776643 69999999999999999999999999999999999


Q ss_pred             eeecCCCCEEEeeccCccccCCCC--cccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCccccccccccc
Q psy2648         543 LLLDSEMNIKIADFGFSNEFTPGN--KLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDS  620 (708)
Q Consensus       543 ILl~~~~~vKl~DFGla~~~~~~~--~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  620 (708)
                      ||||.+|.+||+|||||+.+....  .++..+.|+||.|||+|+|...|+.+                         ||.
T Consensus       249 iLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~a-------------------------VDl  303 (560)
T KOG0600|consen  249 ILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTA-------------------------VDL  303 (560)
T ss_pred             eEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccc-------------------------eee
Confidence            999999999999999999765443  56778999999999999999999988                         899


Q ss_pred             cchhhhHHHHhhCCCC
Q psy2648         621 ASIKENTARLNAGRPA  636 (708)
Q Consensus       621 ~~~~~~~~~~~~~~~~  636 (708)
                      |+.+|++++|.+|.|-
T Consensus       304 WS~GCIl~El~~gkPI  319 (560)
T KOG0600|consen  304 WSVGCILAELFLGKPI  319 (560)
T ss_pred             hhhhHHHHHHHcCCCC
Confidence            9999999999887763


No 424
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94  E-value=8.4e-27  Score=252.73  Aligned_cols=170  Identities=19%  Similarity=0.223  Sum_probs=136.1

Q ss_pred             CCCCCccCCeEEEeEEcccCceEEEEEEEcC-CCcEEEEEEeccCCC---ChhhHHHHHHHHHHHHhCCCCCeee-EEEE
Q psy2648          39 ERDEPHIGKYKLLKTIGKGNFAKVKLAKHVP-TGKEVAIKIIDKTQL---NPGSLQKLFREVRIMKMLDHPNIVK-LFQV  113 (708)
Q Consensus        39 ~~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~-tg~~vAvK~i~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~-l~~~  113 (708)
                      +...+..++|.+.+.||+|+||+||+|++.. +++.||||++.....   .....+.+.+|+++|+.|+|+|||. +++.
T Consensus        11 ~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~   90 (365)
T PRK09188         11 DQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT   90 (365)
T ss_pred             cccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc
Confidence            3445667789999999999999999999886 778889998764321   2334556889999999999999984 5542


Q ss_pred             EEeCCEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCC-CCCCEEEcCCCcEEEEeccCc
Q psy2648         114 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDL-KAENLLLDSEMNIKIADFGFS  192 (708)
Q Consensus       114 ~~~~~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDL-KPeNILld~~~~iKL~DFGls  192 (708)
                          +..|||||||+|++|.. +.   ...   ...++.|++.||.|||++||+|||| ||+|||++.++.+||+|||++
T Consensus        91 ----~~~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA  159 (365)
T PRK09188         91 ----GKDGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLA  159 (365)
T ss_pred             ----CCcEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence                45899999999999963 21   111   2468899999999999999999999 999999999999999999999


Q ss_pred             cccCCCC---------CccccccCCcccccccccCC
Q psy2648         193 NEFTPGN---------KLDTFCGSPPYAAPELFQGK  219 (708)
Q Consensus       193 ~~~~~~~---------~~~~~~Gt~~Y~APE~l~~~  219 (708)
                      +.+....         ...+.++++.|+|||.+...
T Consensus       160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             eecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            8764432         12457789999999998643


No 425
>KOG0658|consensus
Probab=99.94  E-value=4.5e-28  Score=252.10  Aligned_cols=147  Identities=29%  Similarity=0.393  Sum_probs=133.1

Q ss_pred             cccccCceeEEEEEEEeC-----CEEEEEEeccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCccCC
Q psy2648         467 ASSGGETLLKLFQVIETE-----KTLYLVMEYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD  537 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~-----~~~yLVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRD  537 (708)
                      ....|||||+|..+|...     -++.||||||+. +|.+.++.    +..++.-.++.|+.||++||.|||+.||+|||
T Consensus        72 ~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRD  150 (364)
T KOG0658|consen   72 RKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRD  150 (364)
T ss_pred             HhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCC
Confidence            357999999999998643     246799999986 88888874    56799999999999999999999999999999


Q ss_pred             CCCCCeeecCC-CCEEEeeccCccccCCCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCccccccc
Q psy2648         538 LKAENLLLDSE-MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQN  616 (708)
Q Consensus       538 lKp~NILl~~~-~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  616 (708)
                      |||+|||+|.+ |.+||||||.|+.+..++...++..|.+|+|||++.|...|+++                        
T Consensus       151 IKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~------------------------  206 (364)
T KOG0658|consen  151 IKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTS------------------------  206 (364)
T ss_pred             CChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCce------------------------
Confidence            99999999976 89999999999999988888999999999999999999999999                        


Q ss_pred             cccccchhhhHHHHhhCCCCCCC
Q psy2648         617 TIDSASIKENTARLNAGRPAKNT  639 (708)
Q Consensus       617 ~~~~~~~~~~~~~~~~~~~~~~~  639 (708)
                       ||-|+++|+.++|+.|+|==.+
T Consensus       207 -IDiWSaGCV~aELl~g~plFpG  228 (364)
T KOG0658|consen  207 -IDIWSAGCVMAELLKGQPLFPG  228 (364)
T ss_pred             -eEEhhhhHHHHHHhcCCcccCC
Confidence             9999999999999999996444


No 426
>KOG0663|consensus
Probab=99.94  E-value=4.7e-27  Score=240.68  Aligned_cols=148  Identities=26%  Similarity=0.384  Sum_probs=132.1

Q ss_pred             ccccCceeEEEEEEEeC--CEEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCee
Q psy2648         468 SSGGETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL  544 (708)
Q Consensus       468 ~~~~~~Iv~L~~~~~~~--~~~yLVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NIL  544 (708)
                      ..+|||||.+.++....  +.+|||||||+. ||...+..-+ +|.+.+++.++.|++.||+|||.+.|+||||||+|+|
T Consensus       131 ~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLL  209 (419)
T KOG0663|consen  131 KARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLL  209 (419)
T ss_pred             hcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhhee
Confidence            45799999999998754  679999999986 8888887554 8999999999999999999999999999999999999


Q ss_pred             ecCCCCEEEeeccCccccCCC-CcccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCccccccccccccch
Q psy2648         545 LDSEMNIKIADFGFSNEFTPG-NKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASI  623 (708)
Q Consensus       545 l~~~~~vKl~DFGla~~~~~~-~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  623 (708)
                      ++..|.+||+|||+|+.+... ...+..+.|.||+|||+++|...|+++                         ||.|++
T Consensus       210 m~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~-------------------------iDMWSv  264 (419)
T KOG0663|consen  210 LSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTA-------------------------VDMWSV  264 (419)
T ss_pred             eccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcc-------------------------hhhhhH
Confidence            999999999999999987543 446778899999999999999999988                         999999


Q ss_pred             hhhHHHHhhCCCCCCCCC
Q psy2648         624 KENTARLNAGRPAKNTAS  641 (708)
Q Consensus       624 ~~~~~~~~~~~~~~~~~~  641 (708)
                      +|.+++++.+.|-=++-+
T Consensus       265 GCI~aE~l~~kPlf~G~s  282 (419)
T KOG0663|consen  265 GCIFAELLTQKPLFPGKS  282 (419)
T ss_pred             HHHHHHHHhcCCCCCCCc
Confidence            999999998887655443


No 427
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94  E-value=3e-26  Score=223.80  Aligned_cols=152  Identities=24%  Similarity=0.310  Sum_probs=123.7

Q ss_pred             CChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCCCCCccccccCC
Q psy2648         130 GEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSP  208 (708)
Q Consensus       130 g~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~~~~~~~~~Gt~  208 (708)
                      |+|.+++..+ ..+++.+++.++.||+.||+|||+++      ||+|||++.++.+|+  ||+++.....    ...||+
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~----~~~g~~   68 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE----QSRVDP   68 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc----cCCCcc
Confidence            6899999875 45999999999999999999999998      999999999999999  9998765432    237899


Q ss_pred             cccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHcCCCCC-------CCCCCH--HHHHHHHH
Q psy2648         209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTL-RELRERVLRGKYRI-------PFYMST--DCENLLKK  278 (708)
Q Consensus       209 ~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~-~~l~~~i~~~~~~~-------p~~~s~--~~~~Li~~  278 (708)
                      .|||||++.+..|+ .++|||||||++|+|++|+.||..... ......+.......       +...+.  ++.++|.+
T Consensus        69 ~y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  147 (176)
T smart00750       69 YFMAPEVIQGQSYT-EKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRV  147 (176)
T ss_pred             cccChHHhcCCCCc-chhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHH
Confidence            99999999988875 799999999999999999999976532 23333333322211       112233  69999999


Q ss_pred             hhhhCCCCCCCHHHHh
Q psy2648         279 FLVLNPAKRASLEVSG  294 (708)
Q Consensus       279 ~L~~dP~~Rps~~~~~  294 (708)
                      ||..||.+||++.++.
T Consensus       148 cl~~~p~~Rp~~~~ll  163 (176)
T smart00750      148 CASRLPQRREAANHYL  163 (176)
T ss_pred             HHhcccccccCHHHHH
Confidence            9999999999999876


No 428
>KOG0659|consensus
Probab=99.93  E-value=8.1e-27  Score=232.77  Aligned_cols=143  Identities=27%  Similarity=0.395  Sum_probs=124.3

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeee
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL  545 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl  545 (708)
                      ....|+|||.|.++|...+.+.||+|||+ .||...|+... .++..+++.|+.|++.||.|||++.|+||||||.|+|+
T Consensus        56 qel~h~nIi~LiD~F~~~~~l~lVfEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi  134 (318)
T KOG0659|consen   56 QELKHPNIIELIDVFPHKSNLSLVFEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI  134 (318)
T ss_pred             HHccCcchhhhhhhccCCCceEEEEEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE
Confidence            45689999999999999999999999997 48988887544 59999999999999999999999999999999999999


Q ss_pred             cCCCCEEEeeccCccccCCCCc-ccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCccccccccccccchh
Q psy2648         546 DSEMNIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASIK  624 (708)
Q Consensus       546 ~~~~~vKl~DFGla~~~~~~~~-~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  624 (708)
                      +.+|.+||+|||+|+.+.+... ....+.|.||+|||++.|...|++.                         +|.|+++
T Consensus       135 s~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~-------------------------VDmWavG  189 (318)
T KOG0659|consen  135 SSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTG-------------------------VDMWAVG  189 (318)
T ss_pred             cCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCc-------------------------chhhhHH
Confidence            9999999999999998754433 3344899999999999999988877                         6677777


Q ss_pred             hhHHHHhhCCC
Q psy2648         625 ENTARLNAGRP  635 (708)
Q Consensus       625 ~~~~~~~~~~~  635 (708)
                      |.+++|+.+.|
T Consensus       190 CI~AELllr~P  200 (318)
T KOG0659|consen  190 CIFAELLLRVP  200 (318)
T ss_pred             HHHHHHHccCC
Confidence            77777665444


No 429
>KOG1163|consensus
Probab=99.93  E-value=9.2e-26  Score=222.06  Aligned_cols=238  Identities=26%  Similarity=0.405  Sum_probs=189.3

Q ss_pred             CCCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCC-CCeeeEEEEEEeC
Q psy2648          39 ERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH-PNIVKLFQVIETE  117 (708)
Q Consensus        39 ~~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~H-pnIv~l~~~~~~~  117 (708)
                      ..+...+|+|++++.||.|+||.+|+|.+..+|++||||+-......+    .+..|.++.+.|+| ..|..+..+....
T Consensus         8 ~~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hp----qL~yEskvY~iL~~g~GiP~i~~y~~e~   83 (341)
T KOG1163|consen    8 LEELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHP----QLLYESKVYRILQGGVGIPHIRHYGTEK   83 (341)
T ss_pred             hhhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCc----chhHHHHHHHHhccCCCCchhhhhcccc
Confidence            344566889999999999999999999999999999999876543332    36789999999985 5677777777778


Q ss_pred             CEEEEEEeccCCCChHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCC---CcEEEEeccCcc
Q psy2648         118 KTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSN  193 (708)
Q Consensus       118 ~~~ylVmEy~~gg~L~~~i~~~-~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~---~~iKL~DFGls~  193 (708)
                      .+-.+|||++ |-+|.+..... .+++...+.-++-|++.-++|+|.++.|||||||+|+|..-.   ..+.|+|||||+
T Consensus        84 ~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK  162 (341)
T KOG1163|consen   84 DYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK  162 (341)
T ss_pred             ccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchh
Confidence            8889999998 55777766543 568889999999999999999999999999999999998643   468999999998


Q ss_pred             ccCCCC--------CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHHHcCCC
Q psy2648         194 EFTPGN--------KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS---TLRELRERVLRGKY  262 (708)
Q Consensus       194 ~~~~~~--------~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~---~~~~l~~~i~~~~~  262 (708)
                      .+.+..        .-....||..|++-....+...+ ...|+-|+|.+|.++..|.+||++.   +..+-+++|.+.+.
T Consensus       163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqS-RRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~  241 (341)
T KOG1163|consen  163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQS-RRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKM  241 (341)
T ss_pred             hhccccccccCccccCCccceeeeehhhhhhhhhhhh-hhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhc
Confidence            764321        22456799999998887776653 7889999999999999999999985   34556777877766


Q ss_pred             CCCC-----CCCHHHHHHHHHhhhh
Q psy2648         263 RIPF-----YMSTDCENLLKKFLVL  282 (708)
Q Consensus       263 ~~p~-----~~s~~~~~Li~~~L~~  282 (708)
                      ..|.     ..+.|+...|.-|=..
T Consensus       242 s~~ie~LC~G~P~EF~myl~Y~R~L  266 (341)
T KOG1163|consen  242 STPIEVLCKGFPAEFAMYLNYCRGL  266 (341)
T ss_pred             CCCHHHHhCCCcHHHHHHHHHHhhc
Confidence            6552     3455665555555443


No 430
>KOG0661|consensus
Probab=99.93  E-value=4.6e-27  Score=250.38  Aligned_cols=127  Identities=28%  Similarity=0.445  Sum_probs=116.3

Q ss_pred             ccccccCceeEEEEEEEeCC-EEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCe
Q psy2648         466 RASSGGETLLKLFQVIETEK-TLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL  543 (708)
Q Consensus       466 ~~~~~~~~Iv~L~~~~~~~~-~~yLVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NI  543 (708)
                      +....|||||+|++++.+.+ .+|||||||+. +|+++++.++ .|+|..++.|+.||+.||.|+|.+|+.|||+|||||
T Consensus        63 ~kln~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENi  141 (538)
T KOG0661|consen   63 RKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENI  141 (538)
T ss_pred             HhcCCCCcchhhHHHhhccCceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhhe
Confidence            34567999999999999988 99999999974 9999998654 599999999999999999999999999999999999


Q ss_pred             eecCCCCEEEeeccCccccCCCCcccccccCCcccccccccCCCCccCCC
Q psy2648         544 LLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSG  593 (708)
Q Consensus       544 Ll~~~~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~  593 (708)
                      |+.....|||+|||+||........+.++.|.||+|||+++....|+...
T Consensus       142 Li~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pv  191 (538)
T KOG0661|consen  142 LISGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPV  191 (538)
T ss_pred             EecccceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCch
Confidence            99999999999999999998888888999999999999999887777653


No 431
>KOG0604|consensus
Probab=99.93  E-value=1.8e-26  Score=233.21  Aligned_cols=179  Identities=33%  Similarity=0.469  Sum_probs=150.3

Q ss_pred             ccccCceeEEEEEEEe----CCEEEEEEeccCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCC
Q psy2648         468 SSGGETLLKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAE  541 (708)
Q Consensus       468 ~~~~~~Iv~L~~~~~~----~~~~yLVmEy~~gg~L~~~l~~~~~--l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~  541 (708)
                      .++|+|||.++++|++    ...+.+|||+|+||+|++.|..++.  |+|.+|..+++||+.|+.|||+.+|.|||||||
T Consensus       111 ~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpE  190 (400)
T KOG0604|consen  111 ASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPE  190 (400)
T ss_pred             hcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChh
Confidence            4799999999999875    4679999999999999999998876  999999999999999999999999999999999


Q ss_pred             CeeecCC---CCEEEeeccCccccCCCCcccccccCCcccccccccCCCCccCC--------------CCCCCCCcccCC
Q psy2648         542 NLLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSS--------------GGAGTNHTHNSS  604 (708)
Q Consensus       542 NILl~~~---~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s--------------~~~~~~~~~~~~  604 (708)
                      |+|....   ..+||+|||||+.......+.+.|.||+|.|||++..+++--+.              |...+..+|+-.
T Consensus       191 NLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a  270 (400)
T KOG0604|consen  191 NLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA  270 (400)
T ss_pred             heeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc
Confidence            9999754   56999999999988777778899999999999999766532222              344466777777


Q ss_pred             CCCCCcccccccccc---------ccchhhhHHHHhhCCCCCCCCCCCCcc
Q psy2648         605 ISPAPTNFKRQNTID---------SASIKENTARLNAGRPAKNTASIAPLD  646 (708)
Q Consensus       605 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (708)
                      ++|+.....+-..+.         |-.+|++..-|++=.|.+++-.....|
T Consensus       271 ispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  271 ISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             CChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            888887655444443         788999999999999999987655544


No 432
>KOG1164|consensus
Probab=99.93  E-value=1.2e-24  Score=234.49  Aligned_cols=244  Identities=26%  Similarity=0.363  Sum_probs=191.3

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCC-cEEEEEEeccCCCChhhHHHHHHHHHHHHhCCC----CCeeeEEEEE-EeCCEE
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTG-KEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH----PNIVKLFQVI-ETEKTL  120 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg-~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~H----pnIv~l~~~~-~~~~~~  120 (708)
                      +|++.+.||+|+||.||+|.+..++ +.+|+|+.........  ..+..|+.+|+.+..    +++.++++.. ..+..-
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~   96 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN   96 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence            8999999999999999999998775 6899998876432211  146679999988873    6999999999 577889


Q ss_pred             EEEEeccCCCChHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCC-----CcEEEEeccCcc
Q psy2648         121 YLVMEYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE-----MNIKIADFGFSN  193 (708)
Q Consensus       121 ylVmEy~~gg~L~~~i~~~--~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~-----~~iKL~DFGls~  193 (708)
                      ||||+.+ |.+|.+.....  +.++...+..++.|++.+|++||+.|++||||||+|+++...     ..+.|.|||+++
T Consensus        97 ~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen   97 FIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             EEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence            9999987 67999876544  579999999999999999999999999999999999999865     369999999998


Q ss_pred             ccC--CCC--------C-ccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC--
Q psy2648         194 EFT--PGN--------K-LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG--  260 (708)
Q Consensus       194 ~~~--~~~--------~-~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~--  260 (708)
                      .+.  ...        . ...+.||..|+++.+..+... +++.|+||++.++.+|+.|.+||.+........++...  
T Consensus       176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~-~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~  254 (322)
T KOG1164|consen  176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQ-GRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR  254 (322)
T ss_pred             cccccCCCCcccccCCCCccCCCCccccccHHHhCCCcc-CCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence            322  111        1 123559999999999998876 68999999999999999999999875532222222221  


Q ss_pred             -CC-C-CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHh
Q psy2648         261 -KY-R-IPFYMSTDCENLLKKFLVLNPAKRASLEVSG  294 (708)
Q Consensus       261 -~~-~-~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~  294 (708)
                       .. . .....+.++..+...+-..+...+|..+.+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~  291 (322)
T KOG1164|consen  255 KLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLA  291 (322)
T ss_pred             hhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHH
Confidence             11 1 2233456777777777778899999887665


No 433
>KOG0597|consensus
Probab=99.93  E-value=2e-26  Score=248.69  Aligned_cols=133  Identities=31%  Similarity=0.532  Sum_probs=118.6

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|||||.++++|++..++|+|.|||.| +|+.+|...+.++|+.++.+..+++.||.|||+++|+|||+||.|||++
T Consensus        56 r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~  134 (808)
T KOG0597|consen   56 RSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLE  134 (808)
T ss_pred             HhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeec
Confidence            467999999999999999999999999998 9999999999999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccCCCC-cccccccCCcccccccccCCCCccCCCCCCCCCc
Q psy2648         547 SEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHT  600 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~~~~-~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~  600 (708)
                      ..|.+|+||||+|+.+..+. ...+.-|||.|||||++.+..+..+++-|+.++.
T Consensus       135 ~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGci  189 (808)
T KOG0597|consen  135 KGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCI  189 (808)
T ss_pred             CCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHH
Confidence            99999999999999886554 3566789999999999996665555544433333


No 434
>KOG0610|consensus
Probab=99.93  E-value=2.3e-26  Score=241.71  Aligned_cols=208  Identities=25%  Similarity=0.315  Sum_probs=152.9

Q ss_pred             CCCCCCCCCCcCCCcccccccccccc----------------ccCcccccccccCceeEEEEEEEeCCEEEEEEeccCCC
Q psy2648         434 GSGGGGGGGAAQSPSHRGVHRSISAS----------------NAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGG  497 (708)
Q Consensus       434 ~~~ggg~~g~v~s~~hr~~~R~i~~~----------------~~~~~~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg  497 (708)
                      ...|.|..|.|+.+.-++..+.-..+                ..+.......+||.+++||..|++++.+|||||||+||
T Consensus        83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGG  162 (459)
T KOG0610|consen   83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGG  162 (459)
T ss_pred             HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCc
Confidence            34567777777766665543311111                11222345689999999999999999999999999999


Q ss_pred             CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCCCEEEeeccCccccC------------
Q psy2648         498 EVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFT------------  563 (708)
Q Consensus       498 ~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~------------  563 (708)
                      ||...++++  ++|++..+++|+++|+.||+|||-.|||+||||||||||-++|+|-|+||-|+....            
T Consensus       163 dL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~  242 (459)
T KOG0610|consen  163 DLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPR  242 (459)
T ss_pred             cHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCC
Confidence            999988765  469999999999999999999999999999999999999999999999998753210            


Q ss_pred             ----------------------C-C----------------------CcccccccCCcccccccccCCC-----CccCCC
Q psy2648         564 ----------------------P-G----------------------NKLDTFCGSPPYAAPELFQGGA-----PVTSSG  593 (708)
Q Consensus       564 ----------------------~-~----------------------~~~~~~~Gt~~Y~APEvl~g~~-----~~~~s~  593 (708)
                                            . .                      ....+++||-.|+|||||.|..     .+|+-|
T Consensus       243 ~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfG  322 (459)
T KOG0610|consen  243 SSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFG  322 (459)
T ss_pred             CCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHH
Confidence                                  0 0                      1124689999999999999765     222222


Q ss_pred             CCCCCCcccCCCCCCCcc-------------ccccccccccchhhhHHHHhhCCCCCCCCCC
Q psy2648         594 GAGTNHTHNSSISPAPTN-------------FKRQNTIDSASIKENTARLNAGRPAKNTASI  642 (708)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  642 (708)
                      -..+..+++..++.+..+             |+ ..+-.+..++|+..+|+.+.|.+++|+-
T Consensus       323 IflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp-~~~~vs~~akDLIr~LLvKdP~kRlg~~  383 (459)
T KOG0610|consen  323 IFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFP-EEPEVSSAAKDLIRKLLVKDPSKRLGSK  383 (459)
T ss_pred             HHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCC-CCCcchhHHHHHHHHHhccChhhhhccc
Confidence            222233333333333221             21 1225578999999999999999999953


No 435
>KOG0594|consensus
Probab=99.93  E-value=1.2e-25  Score=234.10  Aligned_cols=150  Identities=28%  Similarity=0.431  Sum_probs=126.8

Q ss_pred             cccccCc-eeEEEEEEEeCC------EEEEEEeccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q psy2648         467 ASSGGET-LLKLFQVIETEK------TLYLVMEYASGGEVFDYLVLHG----RMKEKEARAKFRQIVSAVQYCHQKKIIH  535 (708)
Q Consensus       467 ~~~~~~~-Iv~L~~~~~~~~------~~yLVmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~~IiH  535 (708)
                      ....|+| ||.|++++.+.+      .+||||||++. ||..++....    .++...++.+++||+.||.|||+++|+|
T Consensus        65 k~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlH  143 (323)
T KOG0594|consen   65 KRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILH  143 (323)
T ss_pred             HHhCCCcceEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            3457777 999999999988      89999999975 9999997655    5788899999999999999999999999


Q ss_pred             CCCCCCCeeecCCCCEEEeeccCccccC-CCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCccccc
Q psy2648         536 RDLKAENLLLDSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFKR  614 (708)
Q Consensus       536 RDlKp~NILl~~~~~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  614 (708)
                      |||||+|||++..|.+||+|||+|+... +.......++|.+|.|||++.|...|.++                      
T Consensus       144 RDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~----------------------  201 (323)
T KOG0594|consen  144 RDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTS----------------------  201 (323)
T ss_pred             ccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCC----------------------
Confidence            9999999999999999999999999765 44556778999999999999999877776                      


Q ss_pred             cccccccchhhhHHHHhhCCCCCCCCCC
Q psy2648         615 QNTIDSASIKENTARLNAGRPAKNTASI  642 (708)
Q Consensus       615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  642 (708)
                         +|.|+++|..+++..++|=-...|.
T Consensus       202 ---vDiWs~GcIfaEm~~~~~LFpG~se  226 (323)
T KOG0594|consen  202 ---VDIWSLGCIFAEMFTRRPLFPGDSE  226 (323)
T ss_pred             ---cchHhHHHHHHHHHhCCCCCCCCcH
Confidence               5666666666666665555444443


No 436
>KOG1165|consensus
Probab=99.93  E-value=1.2e-24  Score=222.90  Aligned_cols=210  Identities=28%  Similarity=0.450  Sum_probs=178.4

Q ss_pred             CeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEEEEe
Q psy2648          47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        47 ~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      .|+++++||+|+||+.++|.+..+++.||||.-.+....    -.+..|.+..+.|. .++|.++|.+-+...+-.||||
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A----PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid  104 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA----PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID  104 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccccCCc----chHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence            799999999999999999999999999999987654332    34667888888886 6899999988888888899999


Q ss_pred             ccCCCChHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCC-----cEEEEeccCccccCCCC
Q psy2648         126 YASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM-----NIKIADFGFSNEFTPGN  199 (708)
Q Consensus       126 y~~gg~L~~~i~~~~-~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~-----~iKL~DFGls~~~~~~~  199 (708)
                      ++ |-+|.|.....+ +|+...+.-++.|++.-++|+|++.+|+|||||+|+||...+     .|.|+|||+++.+.+..
T Consensus       105 LL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~  183 (449)
T KOG1165|consen  105 LL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK  183 (449)
T ss_pred             hh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence            98 557877776664 699999999999999999999999999999999999998654     48999999999875432


Q ss_pred             --------CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHHHcCCC
Q psy2648         200 --------KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS---TLRELRERVLRGKY  262 (708)
Q Consensus       200 --------~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~---~~~~l~~~i~~~~~  262 (708)
                              ..++..||..||+-....|.+.+ ...|+-|||-++++.|.|.+||.|.   +.++-+++|-..+-
T Consensus       184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQS-RRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr  256 (449)
T KOG1165|consen  184 TKQHIPYREHKSLSGTARYMSINTHLGREQS-RRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKR  256 (449)
T ss_pred             ccccCccccccccccceeeeEeeccccchhh-hhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccc
Confidence                    33567899999999999988865 7899999999999999999999974   55666777765543


No 437
>KOG0986|consensus
Probab=99.93  E-value=6.7e-27  Score=247.26  Aligned_cols=211  Identities=24%  Similarity=0.301  Sum_probs=164.2

Q ss_pred             ccCCCCCCCCCCcCCCccccccccc-----cccccC---cc--------cccccccCceeEEEEEEEeCCEEEEEEeccC
Q psy2648         432 TGGSGGGGGGGAAQSPSHRGVHRSI-----SASNAK---PS--------RRASSGGETLLKLFQVIETEKTLYLVMEYAS  495 (708)
Q Consensus       432 ~~~~~ggg~~g~v~s~~hr~~~R~i-----~~~~~~---~~--------~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~  495 (708)
                      .....|.||||-|.....+...+.-     ..+..+   ..        ...-...+.||.|-..|++.+.++|||..|.
T Consensus       189 ~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMN  268 (591)
T KOG0986|consen  189 VYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMN  268 (591)
T ss_pred             eeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeec
Confidence            4556677888877666555544321     111000   00        0111244589999999999999999999999


Q ss_pred             CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCCCEEEeeccCccccCCCCccccccc
Q psy2648         496 GGEVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCG  573 (708)
Q Consensus       496 gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~G  573 (708)
                      ||||..+|.+.+  .|+|..+++|++||+.||.+||+.+||+|||||+|||||+.|+++|+|+|||..+..+......+|
T Consensus       269 GGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvG  348 (591)
T KOG0986|consen  269 GGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVG  348 (591)
T ss_pred             CCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCccccccC
Confidence            999999998877  799999999999999999999999999999999999999999999999999999988888888899


Q ss_pred             CCcccccccccCCCCccCCCCCCCCCcccCCCCCCCcccccccc-----cc--------------ccchhhhHHHHhhCC
Q psy2648         574 SPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNT-----ID--------------SASIKENTARLNAGR  634 (708)
Q Consensus       574 t~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--------------~~~~~~~~~~~~~~~  634 (708)
                      |.+||||||++++.+..+.+-++.+++.+.++-+-.....++..     +|              |-.++++.+-|+...
T Consensus       349 T~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kd  428 (591)
T KOG0986|consen  349 TVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKD  428 (591)
T ss_pred             cccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHHHHHccC
Confidence            99999999999999555555555555666555433332111111     11              788999999999999


Q ss_pred             CCCCCCCC
Q psy2648         635 PAKNTASI  642 (708)
Q Consensus       635 ~~~~~~~~  642 (708)
                      |++++|.-
T Consensus       429 p~~RLGcr  436 (591)
T KOG0986|consen  429 PEKRLGCR  436 (591)
T ss_pred             HHHhccCC
Confidence            99999975


No 438
>KOG0033|consensus
Probab=99.93  E-value=2.1e-26  Score=226.87  Aligned_cols=178  Identities=28%  Similarity=0.437  Sum_probs=144.9

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|||||+|++.+..+...|||+|+|+|++|..-|..+--++|..+..+++||+.||.|||.+||||||+||+|+|+.
T Consensus        65 ~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLA  144 (355)
T KOG0033|consen   65 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLA  144 (355)
T ss_pred             HhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeee
Confidence            45799999999999999999999999999999999888777789999999999999999999999999999999999996


Q ss_pred             CC---CCEEEeeccCccccCCCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCC------------------C
Q psy2648         547 SE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSS------------------I  605 (708)
Q Consensus       547 ~~---~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~------------------~  605 (708)
                      +.   .-+||+|||+|..+..+..+..++|||.|||||++....+.....-|+.+-..+-.                  +
T Consensus       145 SK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I  224 (355)
T KOG0033|consen  145 SKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQI  224 (355)
T ss_pred             eccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHH
Confidence            54   45999999999999988889999999999999999877655444444332222221                  2


Q ss_pred             CCCCcccc-ccccccccchhhhHHHHhhCCCCCCCCCCCC
Q psy2648         606 SPAPTNFK-RQNTIDSASIKENTARLNAGRPAKNTASIAP  644 (708)
Q Consensus       606 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (708)
                      .-+.+++. ++-+-.+.+++++..|.+.=.|+|+--..+-
T Consensus       225 ~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EA  264 (355)
T KOG0033|consen  225 KAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEA  264 (355)
T ss_pred             hccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHH
Confidence            22233332 2444447889999999999999998654443


No 439
>KOG0591|consensus
Probab=99.92  E-value=8.2e-27  Score=234.03  Aligned_cols=137  Identities=20%  Similarity=0.355  Sum_probs=117.2

Q ss_pred             cccccCceeEEEE-EEEeCCE-EEEEEeccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh--CC--CccC
Q psy2648         467 ASSGGETLLKLFQ-VIETEKT-LYLVMEYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQ--KK--IIHR  536 (708)
Q Consensus       467 ~~~~~~~Iv~L~~-~~~~~~~-~yLVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~--~~--IiHR  536 (708)
                      ....|||||+.++ .|.++.. ++||||||.+|||.++|+.    ++.++|..++.++.|+|.||.+||+  ..  |+||
T Consensus        73 kQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHR  152 (375)
T KOG0591|consen   73 KQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHR  152 (375)
T ss_pred             HhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeec
Confidence            4579999999998 5555554 9999999999999999963    3469999999999999999999999  45  9999


Q ss_pred             CCCCCCeeecCCCCEEEeeccCccccCCCC-cccccccCCcccccccccCCCCccCCCCCCCCCcccC
Q psy2648         537 DLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNS  603 (708)
Q Consensus       537 DlKp~NILl~~~~~vKl~DFGla~~~~~~~-~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~  603 (708)
                      ||||.||+|+.+|.|||.||||++.+.... ...+++|||+||+||++.+..+...|+-|+.++....
T Consensus       153 DIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyE  220 (375)
T KOG0591|consen  153 DIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYE  220 (375)
T ss_pred             cCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHH
Confidence            999999999999999999999999886544 3567899999999999999888888866655544443


No 440
>KOG0690|consensus
Probab=99.92  E-value=9.8e-27  Score=236.83  Aligned_cols=234  Identities=30%  Similarity=0.393  Sum_probs=176.5

Q ss_pred             ccccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeee
Q psy2648         466 RASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL  545 (708)
Q Consensus       466 ~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl  545 (708)
                      .....||.+..|...|++.+++++||||+.||+|+.+|.+...|+|+.+++|-.+|++||.|||+++||+||||.+|+|+
T Consensus       222 L~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL  301 (516)
T KOG0690|consen  222 LQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL  301 (516)
T ss_pred             HHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee
Confidence            34568999999999999999999999999999999999999899999999999999999999999999999999999999


Q ss_pred             cCCCCEEEeeccCccc-cCCCCcccccccCCcccccccccCCCCccCCCCCCC-CCcccCCCCCCCccccccc-------
Q psy2648         546 DSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGT-NHTHNSSISPAPTNFKRQN-------  616 (708)
Q Consensus       546 ~~~~~vKl~DFGla~~-~~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~~~-------  616 (708)
                      |++|++||+|||+++. +..+..+.++||||.|+||||+... .|..+..++. +-.-+.++.+....+...+       
T Consensus       302 DkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDn-DYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI  380 (516)
T KOG0690|consen  302 DKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDN-DYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI  380 (516)
T ss_pred             ccCCceEeeecccchhcccccceeccccCChhhcCchhhccc-cccceeehhhhhHHHHHHHhccCcccccchhHHHHHH
Confidence            9999999999999986 4667788999999999999999644 3444433332 1112223333333211110       


Q ss_pred             ---c-----ccccchhhhHHHHhhCCCCCCCCCCCCc-------------------cccCCCCCCCcccccccCc-----
Q psy2648         617 ---T-----IDSASIKENTARLNAGRPAKNTASIAPL-------------------DTNTSNIGKPRGVTKSNTM-----  664 (708)
Q Consensus       617 ---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~-----  664 (708)
                         .     --+..++.+++-|+...|.|++|-+.--                   .-...++=||.-++..+|.     
T Consensus       381 l~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqVtSetDTryFD~E  460 (516)
T KOG0690|consen  381 LMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQVTSETDTRYFDEE  460 (516)
T ss_pred             HhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCCCCcccccchhhhhhh
Confidence               0     1177899999999999999999865321                   2236788899866665553     


Q ss_pred             -CCCccccCCCCCcc--------ccc---cchhhhhhhccccccCCCC
Q psy2648         665 -TGNRTTLTPGGSVG--------RRS---TISYDAKAASNEKTNTAGD  700 (708)
Q Consensus       665 -~~~~~~~~~~~~~~--------~~~---~~~~~~~~~~~~~~~~~~~  700 (708)
                       |+.-.++||+-.-|        ||+   ..||-+...|.+++.++..
T Consensus       461 FT~q~v~lTPP~r~~~~~~~~~e~~~~FpQFsy~~~~~s~~r~~~~~~  508 (516)
T KOG0690|consen  461 FTSQPVTLTPPDRYGSTVDEDEERRPHFPQFSYSASMGSINRIHEASE  508 (516)
T ss_pred             hhcceeEecCCCCCCcccchhhhhccCCcceeeecchhhhhchhhccc
Confidence             46666777763322        333   3567666666666655443


No 441
>KOG0660|consensus
Probab=99.92  E-value=5.2e-26  Score=236.32  Aligned_cols=143  Identities=27%  Similarity=0.466  Sum_probs=130.8

Q ss_pred             ccccCceeEEEEEEEe-----CCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCC
Q psy2648         468 SSGGETLLKLFQVIET-----EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN  542 (708)
Q Consensus       468 ~~~~~~Iv~L~~~~~~-----~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~N  542 (708)
                      ...|+|||.+++++..     -..+|+|+|+| +.||...|+.+..++++.++.++.||+.||+|+|+.+|+||||||.|
T Consensus        77 ~~~HeNIi~l~di~~p~~~~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsN  155 (359)
T KOG0660|consen   77 HLRHENIIGLLDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSN  155 (359)
T ss_pred             HhcCCCcceEEeecccccccccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhh
Confidence            4569999999999976     36799999999 56888888887779999999999999999999999999999999999


Q ss_pred             eeecCCCCEEEeeccCccccCC---CCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCcccccccccc
Q psy2648         543 LLLDSEMNIKIADFGFSNEFTP---GNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTID  619 (708)
Q Consensus       543 ILl~~~~~vKl~DFGla~~~~~---~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (708)
                      +|++.++.+||||||+|+....   ...++..+.|.||.|||++.....|+.+                         ||
T Consensus       156 ll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~a-------------------------iD  210 (359)
T KOG0660|consen  156 LLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKA-------------------------ID  210 (359)
T ss_pred             eeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccch-------------------------hh
Confidence            9999999999999999998753   4456778999999999999999999998                         99


Q ss_pred             ccchhhhHHHHhhCCCC
Q psy2648         620 SASIKENTARLNAGRPA  636 (708)
Q Consensus       620 ~~~~~~~~~~~~~~~~~  636 (708)
                      .|+++|.+++++.|.|-
T Consensus       211 iWSvGCI~AEmL~gkpl  227 (359)
T KOG0660|consen  211 IWSVGCILAEMLTGKPL  227 (359)
T ss_pred             hhhhhHHHHHHHcCCCC
Confidence            99999999999999986


No 442
>KOG0606|consensus
Probab=99.92  E-value=2.2e-25  Score=255.96  Aligned_cols=212  Identities=34%  Similarity=0.613  Sum_probs=173.2

Q ss_pred             CCCCccCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE
Q psy2648          40 RDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKT  119 (708)
Q Consensus        40 ~~~~~~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  119 (708)
                      +..+.-.+|..++.|-.|+||.||+++|+.+.+.+|+| |+++.+       ++|-  |+.....|++|           
T Consensus        77 ~~~p~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-------ilRn--ilt~a~npfvv-----------  135 (1205)
T KOG0606|consen   77 RRAPSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-------ILRN--ILTFAGNPFVV-----------  135 (1205)
T ss_pred             ccCCCccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-------hhhc--cccccCCccee-----------
Confidence            34455568999999999999999999999999999994 554432       2221  55556677766           


Q ss_pred             EEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEeccCccccCC--
Q psy2648         120 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP--  197 (708)
Q Consensus       120 ~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DFGls~~~~~--  197 (708)
                                ||=...++.-+.++.+-        +.|++|||+.||+|||+||+|.||..-|++|+.|||+++....  
T Consensus       136 ----------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~  197 (1205)
T KOG0606|consen  136 ----------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSL  197 (1205)
T ss_pred             ----------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhc
Confidence                      55555555556666433        7899999999999999999999999999999999999875321  


Q ss_pred             ------CC--------CccccccCCcccccccccCCccCCCchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC
Q psy2648         198 ------GN--------KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR  263 (708)
Q Consensus       198 ------~~--------~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyelltG~~Pf~~~~~~~l~~~i~~~~~~  263 (708)
                            +.        .-+..||||.|.|||++..+.| |..+|||++|+|+|+.+.|+.||.+.+.++|+..+......
T Consensus       198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgy-gkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~  276 (1205)
T KOG0606|consen  198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGY-GKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE  276 (1205)
T ss_pred             cchhhhcchHHHHHHhhhccccCCccccChhhhhhhcc-CCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcc
Confidence                  10        0134699999999999998888 68999999999999999999999999999999999988777


Q ss_pred             CCC---CCCHHHHHHHHHhhhhCCCCCCCHH
Q psy2648         264 IPF---YMSTDCENLLKKFLVLNPAKRASLE  291 (708)
Q Consensus       264 ~p~---~~s~~~~~Li~~~L~~dP~~Rps~~  291 (708)
                      +|.   .+.+|++++|.++|+.+|..|..-.
T Consensus       277 wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~  307 (1205)
T KOG0606|consen  277 WPEEDEALPPEAQDLIEQLLRQNPLCRLGTG  307 (1205)
T ss_pred             ccccCcCCCHHHHHHHHHHHHhChHhhcccc
Confidence            774   4678999999999999999997543


No 443
>KOG1035|consensus
Probab=99.92  E-value=1.1e-23  Score=244.75  Aligned_cols=197  Identities=20%  Similarity=0.181  Sum_probs=138.5

Q ss_pred             HHHHHHHHHHHhCCCCCeeeEEEEEEeCC----EEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy2648          90 QKLFREVRIMKMLDHPNIVKLFQVIETEK----TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK  165 (708)
Q Consensus        90 ~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~g  165 (708)
                      .....|...+..+.|+|++.++.+--...    .+.+..|+|+.-++...+..-+.++.+.++.+..++++||.|+|+..
T Consensus       227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~  306 (1351)
T KOG1035|consen  227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLS  306 (1351)
T ss_pred             HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhc
Confidence            33445667788889999999998854332    23456689999999999988899999999999999999999999986


Q ss_pred             ceecCCCCC---CEEEcCCCcEEEE--eccCccccCCCCCccccccCCcccccccccCCccC-CCchhHHHHHHHHHHHH
Q psy2648         166 IIHRDLKAE---NLLLDSEMNIKIA--DFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLV  239 (708)
Q Consensus       166 IvHRDLKPe---NILld~~~~iKL~--DFGls~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~-~~~~DIWSlGvilyell  239 (708)
                      ..|.-|--.   +-..+.++.+.+.  ||+.+.............-...+.+||......+. ....|+|.+|..+..+.
T Consensus       307 l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~  386 (1351)
T KOG1035|consen  307 LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLS  386 (1351)
T ss_pred             cceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhh
Confidence            655544444   3344556666666  88887766544433344445668888888766554 12369999999999998


Q ss_pred             cCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHhh
Q psy2648         240 SGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRASLEVSGE  295 (708)
Q Consensus       240 tG~~Pf~~~~~~~l~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rps~~~~~~  295 (708)
                      .|..+-.-.   .+...++      +.....+..+++.+|+.-|+++|++..++..
T Consensus       387 ~~~~i~~~~---~~~~~~l------~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~  433 (1351)
T KOG1035|consen  387 QGEDISEKS---AVPVSLL------DVLSTSELLDALPKCLDEDSEERLSALELLT  433 (1351)
T ss_pred             hcCcccccc---cchhhhh------ccccchhhhhhhhhhcchhhhhccchhhhhh
Confidence            876542111   1111111      1111116778899999999999999988763


No 444
>KOG0586|consensus
Probab=99.92  E-value=2.1e-25  Score=244.98  Aligned_cols=178  Identities=56%  Similarity=0.748  Sum_probs=146.7

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      .+..|||||+||++++++..+||||||+.+|++++++.+++++.+..++.++.|+++|++|||+++|||||||.+||||+
T Consensus       110 k~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~  189 (596)
T KOG0586|consen  110 KSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLD  189 (596)
T ss_pred             HhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccc
Confidence            56799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccCCCCcccccccCCcccccccccCCCCc------cCCCCCCCCCcccCCCCCCCccc--------
Q psy2648         547 SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPV------TSSGGAGTNHTHNSSISPAPTNF--------  612 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~~------~~s~~~~~~~~~~~~~~~~~~~~--------  612 (708)
                      .+.++||+|||++..+..+....++||++.|.|||++.|..+.      ++.|...+.+.+++.++-+.+-.        
T Consensus       190 ~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~  269 (596)
T KOG0586|consen  190 ENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR  269 (596)
T ss_pred             cccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhee
Confidence            9999999999999999999999999999999999999987643      33333333433333332222211        


Q ss_pred             --cccccccccchhhhHHHHhhCCCCCCCCCCCC
Q psy2648         613 --KRQNTIDSASIKENTARLNAGRPAKNTASIAP  644 (708)
Q Consensus       613 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (708)
                        -|-....+.+-++++.+++.-.|.++.-.++-
T Consensus       270 gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqi  303 (596)
T KOG0586|consen  270 GKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQI  303 (596)
T ss_pred             eeecccceeechhHHHHHHhhccCccccCCHHHh
Confidence              12233347788888888888888887654443


No 445
>KOG0614|consensus
Probab=99.91  E-value=7.4e-27  Score=249.24  Aligned_cols=175  Identities=29%  Similarity=0.448  Sum_probs=151.3

Q ss_pred             ccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecC
Q psy2648         468 SSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS  547 (708)
Q Consensus       468 ~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~  547 (708)
                      ....+.||+||-.|.++.++|+.||-|-||+|...|+.++.|++..+++|+..+++|+.|||++|||+|||||||+|+|.
T Consensus       476 ~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~  555 (732)
T KOG0614|consen  476 ECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDN  555 (732)
T ss_pred             hcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeecc
Confidence            34578899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEeeccCccccCCCCcccccccCCcccccccccCCC-----CccCCCCCCCCCcccCCCCCCCcccccccccc---
Q psy2648         548 EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGA-----PVTSSGGAGTNHTHNSSISPAPTNFKRQNTID---  619 (708)
Q Consensus       548 ~~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~-----~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---  619 (708)
                      .|++||.|||+|+.+..+..+.++||||.|.|||+++...     .|++.|-.-+.++.+.+++.+...+...+.|=   
T Consensus       556 ~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGi  635 (732)
T KOG0614|consen  556 RGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGI  635 (732)
T ss_pred             CCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhh
Confidence            9999999999999999999999999999999999998543     45555544456666777766666544333322   


Q ss_pred             ---------ccchhhhHHHHhhCCCCCCCCCC
Q psy2648         620 ---------SASIKENTARLNAGRPAKNTASI  642 (708)
Q Consensus       620 ---------~~~~~~~~~~~~~~~~~~~~~~~  642 (708)
                               ...+.++..+|-+..|+.++|+.
T Consensus       636 d~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~  667 (732)
T KOG0614|consen  636 DKIEFPRRITKTATDLIKKLCRDNPTERLGYQ  667 (732)
T ss_pred             hhhhcccccchhHHHHHHHHHhcCcHhhhccc
Confidence                     55678889999999999999953


No 446
>KOG0032|consensus
Probab=99.91  E-value=8.7e-25  Score=238.84  Aligned_cols=177  Identities=34%  Similarity=0.480  Sum_probs=141.2

Q ss_pred             cccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCC
Q psy2648         469 SGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE  548 (708)
Q Consensus       469 ~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~  548 (708)
                      ++|+|||.|+++|++...+|||||+|.||+|++.|.+. .++|..+..+++||+.++.|||+.|||||||||||+|+...
T Consensus        93 ~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~  171 (382)
T KOG0032|consen   93 SGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASK  171 (382)
T ss_pred             cCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccc
Confidence            34999999999999999999999999999999999887 59999999999999999999999999999999999999643


Q ss_pred             ----CCEEEeeccCccccCCCCcccccccCCcccccccccCCCCccCCCCCC-----CCCcccCCCCCCCcc--------
Q psy2648         549 ----MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAG-----TNHTHNSSISPAPTN--------  611 (708)
Q Consensus       549 ----~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~-----~~~~~~~~~~~~~~~--------  611 (708)
                          +.+|++|||+|....++......|||+.|+|||++.+..+....+.|+     +..+.+.+++-+...        
T Consensus       172 ~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~  251 (382)
T KOG0032|consen  172 DEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAIL  251 (382)
T ss_pred             cCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHH
Confidence                479999999999988877888999999999999998655444444333     222333333222221        


Q ss_pred             -----c-cccccccccchhhhHHHHhhCCCCCCCCCCCCcc
Q psy2648         612 -----F-KRQNTIDSASIKENTARLNAGRPAKNTASIAPLD  646 (708)
Q Consensus       612 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (708)
                           | ....+--+.++++...+++.-.|.+|.-...-+.
T Consensus       252 ~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  252 RGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             cCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence                 1 1111122888999999999999988876555443


No 447
>KOG4717|consensus
Probab=99.91  E-value=1.3e-24  Score=232.07  Aligned_cols=145  Identities=40%  Similarity=0.740  Sum_probs=129.5

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeee
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL  545 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl  545 (708)
                      ...+|||||+||+++.+...+|||+|+-.+|||+++|.++. .+.|+.++.||+||+.|+.|||+..||||||||||+.+
T Consensus        72 KLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVF  151 (864)
T KOG4717|consen   72 KLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVF  151 (864)
T ss_pred             HHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEE
Confidence            34699999999999999999999999999999999997664 69999999999999999999999999999999999875


Q ss_pred             -cCCCCEEEeeccCccccCCCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCccccccccccccchh
Q psy2648         546 -DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASIK  624 (708)
Q Consensus       546 -~~~~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  624 (708)
                       .+-|-|||+||||+..+.++..+.+.||++.|-|||+++|..+...+                         +|-|+++
T Consensus       152 FEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPA-------------------------VDiWSLG  206 (864)
T KOG4717|consen  152 FEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPA-------------------------VDIWSLG  206 (864)
T ss_pred             eeecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcc-------------------------hhhhHHH
Confidence             56789999999999999999999999999999999999998865555                         5666666


Q ss_pred             hhHHHHhhCCCC
Q psy2648         625 ENTARLNAGRPA  636 (708)
Q Consensus       625 ~~~~~~~~~~~~  636 (708)
                      -.+--|.-|||+
T Consensus       207 VILyMLVCGq~P  218 (864)
T KOG4717|consen  207 VILYMLVCGQPP  218 (864)
T ss_pred             HHHHHHHhCCCc
Confidence            666666677665


No 448
>KOG0198|consensus
Probab=99.91  E-value=9.2e-25  Score=230.66  Aligned_cols=118  Identities=30%  Similarity=0.556  Sum_probs=105.1

Q ss_pred             ccccCceeEEEEEEEeCC--EEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCee
Q psy2648         468 SSGGETLLKLFQVIETEK--TLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL  544 (708)
Q Consensus       468 ~~~~~~Iv~L~~~~~~~~--~~yLVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NIL  544 (708)
                      ...|+|||+.++......  .++|.|||+++|+|.+++.+.+ .|+|..++.|.+||+.||.|||++|||||||||+|||
T Consensus        70 ~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiL  149 (313)
T KOG0198|consen   70 RLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANIL  149 (313)
T ss_pred             hCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEE
Confidence            345999999999755544  7999999999999999999887 7999999999999999999999999999999999999


Q ss_pred             ecC-CCCEEEeeccCccccCC----CCcccccccCCcccccccccC
Q psy2648         545 LDS-EMNIKIADFGFSNEFTP----GNKLDTFCGSPPYAAPELFQG  585 (708)
Q Consensus       545 l~~-~~~vKl~DFGla~~~~~----~~~~~~~~Gt~~Y~APEvl~g  585 (708)
                      ++. ++.+||+|||+++....    ......+.||+.|||||++..
T Consensus       150 l~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~  195 (313)
T KOG0198|consen  150 LDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRN  195 (313)
T ss_pred             EeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcC
Confidence            999 79999999999987653    122446889999999999996


No 449
>KOG0578|consensus
Probab=99.91  E-value=4.2e-25  Score=240.61  Aligned_cols=175  Identities=23%  Similarity=0.382  Sum_probs=140.6

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+|||++++.|--.+.+|.|||||+||+|.+.+... .++|.+++.++++++.||.|||.+||||||||.+|||++
T Consensus       325 ~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~  403 (550)
T KOG0578|consen  325 RDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT  403 (550)
T ss_pred             HhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec
Confidence            4679999999999999999999999999999998877654 699999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccCCCC-cccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCccccccccc-------
Q psy2648         547 SEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTI-------  618 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~~~~-~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~-------  618 (708)
                      .+|.+||+||||+..+.... ...+.+|||+|||||++....+-+.-+-|+.+.|.-.++-+.+.+|. .+++       
T Consensus       404 ~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln-E~PlrAlyLIa  482 (550)
T KOG0578|consen  404 MDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIA  482 (550)
T ss_pred             cCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC-CChHHHHHHHh
Confidence            99999999999998876554 66788999999999999876655555555555555555554444432 1111       


Q ss_pred             ------------cccchhhhHHHHhhCCCCCCCCCCC
Q psy2648         619 ------------DSASIKENTARLNAGRPAKNTASIA  643 (708)
Q Consensus       619 ------------~~~~~~~~~~~~~~~~~~~~~~~~~  643 (708)
                                  -|...++-+.|-+.=++.++.-..+
T Consensus       483 ~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~e  519 (550)
T KOG0578|consen  483 TNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKE  519 (550)
T ss_pred             hcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHH
Confidence                        1667777777777767766655443


No 450
>KOG0612|consensus
Probab=99.91  E-value=2.2e-25  Score=256.79  Aligned_cols=203  Identities=24%  Similarity=0.313  Sum_probs=150.2

Q ss_pred             CCCCCCCCcCCCccccccccccccc----------------cCcccccccccCceeEEEEEEEeCCEEEEEEeccCCCCH
Q psy2648         436 GGGGGGGAAQSPSHRGVHRSISASN----------------AKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGGEV  499 (708)
Q Consensus       436 ~ggg~~g~v~s~~hr~~~R~i~~~~----------------~~~~~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L  499 (708)
                      -|.|+||-|..++|++..+.-..+.                .+-...+....+.||.||..|+++.++||||||++||||
T Consensus        83 IGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDl  162 (1317)
T KOG0612|consen   83 IGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDL  162 (1317)
T ss_pred             hcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchH
Confidence            3678888888888877654321111                111122445678899999999999999999999999999


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCCCEEEeeccCccccCCCCc--ccccccCCcc
Q psy2648         500 FDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--LDTFCGSPPY  577 (708)
Q Consensus       500 ~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~--~~~~~Gt~~Y  577 (708)
                      ..++.+.++++|+.|++|+++|+.||.-||+.|.|||||||+|||||..|++||+|||.+-.+..+..  ....+|||-|
T Consensus       163 ltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDY  242 (1317)
T KOG0612|consen  163 LTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDY  242 (1317)
T ss_pred             HHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCc
Confidence            99999988999999999999999999999999999999999999999999999999998876654332  4567899999


Q ss_pred             cccccccCCC----CccCCCCCCCCCcccC-CCCCCC--------------------ccccccccccccchhhhHHHHhh
Q psy2648         578 AAPELFQGGA----PVTSSGGAGTNHTHNS-SISPAP--------------------TNFKRQNTIDSASIKENTARLNA  632 (708)
Q Consensus       578 ~APEvl~g~~----~~~~s~~~~~~~~~~~-~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~  632 (708)
                      ++||+++...    .|...-.|+..+.+.- ++-+..                    -.|+ ...-.|.-++++..+|+.
T Consensus       243 ISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP-~~~~VSeeakdLI~~ll~  321 (1317)
T KOG0612|consen  243 ISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP-DETDVSEEAKDLIEALLC  321 (1317)
T ss_pred             cCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC-cccccCHHHHHHHHHHhc
Confidence            9999997432    2222222221111100 010000                    0134 333468889999999888


Q ss_pred             CCCCCCCC
Q psy2648         633 GRPAKNTA  640 (708)
Q Consensus       633 ~~~~~~~~  640 (708)
                       .|..++|
T Consensus       322 -~~e~RLg  328 (1317)
T KOG0612|consen  322 -DREVRLG  328 (1317)
T ss_pred             -Chhhhcc
Confidence             7888888


No 451
>KOG0585|consensus
Probab=99.91  E-value=4.4e-25  Score=234.98  Aligned_cols=176  Identities=32%  Similarity=0.449  Sum_probs=132.0

Q ss_pred             cccccCceeEEEEEEEeC--CEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCee
Q psy2648         467 ASSGGETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL  544 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~--~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NIL  544 (708)
                      .-..|+|||+|+++..+.  +.+|||+|||..|.+...-.....+++.+|+.|++.++.||.|||.+|||||||||.|+|
T Consensus       163 Kkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLL  242 (576)
T KOG0585|consen  163 KKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLL  242 (576)
T ss_pred             HhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheE
Confidence            346889999999999875  689999999999987643322223999999999999999999999999999999999999


Q ss_pred             ecCCCCEEEeeccCccccCC------CCcccccccCCcccccccccCCCCccCCC---------CCCCCCcccCCCCCCC
Q psy2648         545 LDSEMNIKIADFGFSNEFTP------GNKLDTFCGSPPYAAPELFQGGAPVTSSG---------GAGTNHTHNSSISPAP  609 (708)
Q Consensus       545 l~~~~~vKl~DFGla~~~~~------~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~---------~~~~~~~~~~~~~~~~  609 (708)
                      |+.+|+|||+|||++.....      ...+...+|||.|||||.+.++.....+|         .-.++..++..++-+-
T Consensus       243 l~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~  322 (576)
T KOG0585|consen  243 LSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD  322 (576)
T ss_pred             EcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc
Confidence            99999999999999876522      22345579999999999999865333332         2223444333333222


Q ss_pred             cccc------------ccccccccchhhhHHHHhhCCCCCCCCCC
Q psy2648         610 TNFK------------RQNTIDSASIKENTARLNAGRPAKNTASI  642 (708)
Q Consensus       610 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  642 (708)
                      ..+.            .-++.-...++|++.||+.++|.++..-.
T Consensus       323 ~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~  367 (576)
T KOG0585|consen  323 FELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLP  367 (576)
T ss_pred             hHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehh
Confidence            2111            11223367889999999999999886543


No 452
>KOG0608|consensus
Probab=99.91  E-value=1.7e-24  Score=235.84  Aligned_cols=129  Identities=29%  Similarity=0.579  Sum_probs=112.0

Q ss_pred             ccccccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCe
Q psy2648         464 SRRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL  543 (708)
Q Consensus       464 ~~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NI  543 (708)
                      ...+..+.+.||+||..|++.+.+|+||||++|||+..+|.+.+.|+|+.|++|++++.+|+++.|..|.|||||||+||
T Consensus       681 DILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNI  760 (1034)
T KOG0608|consen  681 DILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNI  760 (1034)
T ss_pred             hhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccce
Confidence            34467788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCCEEEeeccCccccC---------CC------------------C----------------cccccccCCccccc
Q psy2648         544 LLDSEMNIKIADFGFSNEFT---------PG------------------N----------------KLDTFCGSPPYAAP  580 (708)
Q Consensus       544 Ll~~~~~vKl~DFGla~~~~---------~~------------------~----------------~~~~~~Gt~~Y~AP  580 (708)
                      |||.+|++||+||||+.-+.         .+                  .                ...+.+||+.|+||
T Consensus       761 LIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiap  840 (1034)
T KOG0608|consen  761 LIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAP  840 (1034)
T ss_pred             EEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccCh
Confidence            99999999999999975321         10                  0                01246899999999


Q ss_pred             ccccCCCCccCC
Q psy2648         581 ELFQGGAPVTSS  592 (708)
Q Consensus       581 Evl~g~~~~~~s  592 (708)
                      |||....+....
T Consensus       841 evl~r~g~~q~c  852 (1034)
T KOG0608|consen  841 EVLARTGYTQLC  852 (1034)
T ss_pred             HHhcccCccccc
Confidence            999866644444


No 453
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.90  E-value=4.2e-24  Score=212.77  Aligned_cols=141  Identities=25%  Similarity=0.236  Sum_probs=112.6

Q ss_pred             EeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhh------------------------HHHHHHHHHHHHhCCCCC
Q psy2648          51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGS------------------------LQKLFREVRIMKMLDHPN  106 (708)
Q Consensus        51 ~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~------------------------~~~~~~Ei~il~~l~Hpn  106 (708)
                      ...||+|+||.||+|.+. +|+.||||+++........                        .....+|+++|+.+.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999999987 8999999999765321111                        112345999999998877


Q ss_pred             eeeEEEEEEeCCEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHH-HHCCceecCCCCCCEEEcCCCcEE
Q psy2648         107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC-HQKKIIHRDLKAENLLLDSEMNIK  185 (708)
Q Consensus       107 Iv~l~~~~~~~~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yL-H~~gIvHRDLKPeNILld~~~~iK  185 (708)
                      |...+.+ .... .||||||++|+++...+...+.+++.++..++.||+.+|.|| |+.||+||||||+|||++ ++.++
T Consensus        81 v~~p~~~-~~~~-~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~  157 (190)
T cd05147          81 IPCPEPI-LLKS-HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLY  157 (190)
T ss_pred             CCCCcEE-EecC-CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEE
Confidence            6443322 2222 389999999988876655567899999999999999999999 799999999999999998 47899


Q ss_pred             EEeccCcccc
Q psy2648         186 IADFGFSNEF  195 (708)
Q Consensus       186 L~DFGls~~~  195 (708)
                      |+|||+|...
T Consensus       158 LiDFG~a~~~  167 (190)
T cd05147         158 IIDVSQSVEH  167 (190)
T ss_pred             EEEccccccC
Confidence            9999998643


No 454
>KOG0696|consensus
Probab=99.90  E-value=5.7e-25  Score=229.67  Aligned_cols=172  Identities=31%  Similarity=0.411  Sum_probs=135.8

Q ss_pred             ccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCC
Q psy2648         470 GGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM  549 (708)
Q Consensus       470 ~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~  549 (708)
                      .-|.+++||..|++-+++|+||||+.||||..+|++-|+|.|..|.+|+++|+.||-+||++|||+||||.+|||||.+|
T Consensus       408 kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eG  487 (683)
T KOG0696|consen  408 KPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG  487 (683)
T ss_pred             CCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCC
Confidence            44679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CEEEeeccCcccc-CCCCcccccccCCcccccccccCCCCccCCCCCCCC-CcccCCCCCCCccccc-----------cc
Q psy2648         550 NIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTN-HTHNSSISPAPTNFKR-----------QN  616 (708)
Q Consensus       550 ~vKl~DFGla~~~-~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~-~~~~~~~~~~~~~~~~-----------~~  616 (708)
                      ++||+|||++++- .++..+.++||||.|+|||++.-.. |..|..|+.. -+.+.+.-+ ...|.+           ..
T Consensus       488 HiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqP-YgksvDWWa~GVLLyEmlaG-QpPFdGeDE~elF~aI~eh  565 (683)
T KOG0696|consen  488 HIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAG-QPPFDGEDEDELFQAIMEH  565 (683)
T ss_pred             ceEeeecccccccccCCcceeeecCCCcccccceEEecc-cccchhHHHHHHHHHHHHcC-CCCCCCCCHHHHHHHHHHc
Confidence            9999999999874 4566778999999999999997654 4544443322 122221111 111110           00


Q ss_pred             ccc-----ccchhhhHHHHhhCCCCCCCCCCC
Q psy2648         617 TID-----SASIKENTARLNAGRPAKNTASIA  643 (708)
Q Consensus       617 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  643 (708)
                      +..     |..+.+.-.-++...|+|++|...
T Consensus       566 nvsyPKslSkEAv~ickg~ltK~P~kRLGcg~  597 (683)
T KOG0696|consen  566 NVSYPKSLSKEAVAICKGLLTKHPGKRLGCGP  597 (683)
T ss_pred             cCcCcccccHHHHHHHHHHhhcCCccccCCCC
Confidence            111     555666667788999999998753


No 455
>KOG0192|consensus
Probab=99.90  E-value=3.4e-24  Score=232.35  Aligned_cols=129  Identities=27%  Similarity=0.429  Sum_probs=113.0

Q ss_pred             cccccCceeEEEEEEEeCC-EEEEEEeccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-CccCCCCCCC
Q psy2648         467 ASSGGETLLKLFQVIETEK-TLYLVMEYASGGEVFDYLVL--HGRMKEKEARAKFRQIVSAVQYCHQKK-IIHRDLKAEN  542 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~-~~yLVmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~N  542 (708)
                      ....|||||++++++.++. .+.|||||+++|+|.+++..  ++.++...+..++.||+.||.|||+++ ||||||||+|
T Consensus        94 ~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~N  173 (362)
T KOG0192|consen   94 SRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDN  173 (362)
T ss_pred             HhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhh
Confidence            4489999999999999988 89999999999999999987  578999999999999999999999999 9999999999


Q ss_pred             eeecCCC-CEEEeeccCccccCCC-CcccccccCCcccccccccCC--CCccCCCCC
Q psy2648         543 LLLDSEM-NIKIADFGFSNEFTPG-NKLDTFCGSPPYAAPELFQGG--APVTSSGGA  595 (708)
Q Consensus       543 ILl~~~~-~vKl~DFGla~~~~~~-~~~~~~~Gt~~Y~APEvl~g~--~~~~~s~~~  595 (708)
                      ||++..+ ++||||||+++..... .......||+.|||||++.+.  .+...++..
T Consensus       174 iLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~Dvy  230 (362)
T KOG0192|consen  174 ILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVY  230 (362)
T ss_pred             EEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhh
Confidence            9999998 9999999999876544 344457899999999999963  444444433


No 456
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.90  E-value=4.3e-24  Score=233.56  Aligned_cols=129  Identities=29%  Similarity=0.491  Sum_probs=111.8

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|++|+++++++++...+|||||||+||+|.+++.+.+.+++.+++.++.||+.||.|||++|||||||||+|||++
T Consensus        56 ~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~  135 (363)
T cd05628          56 VEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD  135 (363)
T ss_pred             HhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC
Confidence            34579999999999999999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccCCCC------------------------------------cccccccCCcccccccccCCCCcc
Q psy2648         547 SEMNIKIADFGFSNEFTPGN------------------------------------KLDTFCGSPPYAAPELFQGGAPVT  590 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~~~~------------------------------------~~~~~~Gt~~Y~APEvl~g~~~~~  590 (708)
                      .++.+||+|||+++......                                    .....+||+.|||||++.+.....
T Consensus       136 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~  215 (363)
T cd05628         136 SKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNK  215 (363)
T ss_pred             CCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCC
Confidence            99999999999987542210                                    113468999999999998765444


Q ss_pred             CCCCC
Q psy2648         591 SSGGA  595 (708)
Q Consensus       591 ~s~~~  595 (708)
                      .++-+
T Consensus       216 ~~Dvw  220 (363)
T cd05628         216 LCDWW  220 (363)
T ss_pred             chhhh
Confidence            44333


No 457
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.90  E-value=7.8e-24  Score=227.76  Aligned_cols=175  Identities=32%  Similarity=0.413  Sum_probs=139.0

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+||++++++|++.+.+|||||||++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        50 ~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~  129 (323)
T cd05571          50 QNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD  129 (323)
T ss_pred             HhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC
Confidence            34579999999999999999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCcccc-CCCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCcccc------------
Q psy2648         547 SEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFK------------  613 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~-~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~------------  613 (708)
                      .++.+||+|||+++.. .........+||+.|||||++.+..+...++-++.+.+......+......            
T Consensus       130 ~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~  209 (323)
T cd05571         130 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM  209 (323)
T ss_pred             CCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence            9999999999998754 233344567899999999999877655555555444443333221111000            


Q ss_pred             ---ccccccccchhhhHHHHhhCCCCCCCCC
Q psy2648         614 ---RQNTIDSASIKENTARLNAGRPAKNTAS  641 (708)
Q Consensus       614 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  641 (708)
                         .....-+..+.+++.+++..+|.+|.+.
T Consensus       210 ~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~  240 (323)
T cd05571         210 EEIRFPRTLSPEAKSLLAGLLKKDPKQRLGG  240 (323)
T ss_pred             CCCCCCCCCCHHHHHHHHHHccCCHHHcCCC
Confidence               0001125678899999999999999853


No 458
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.90  E-value=1.3e-23  Score=226.01  Aligned_cols=179  Identities=32%  Similarity=0.398  Sum_probs=140.7

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeee
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLL  545 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~-~~IiHRDlKp~NILl  545 (708)
                      ....|+||++++++|+++..+|||||||++|+|..++...+.+++..+..++.||+.||.|||+ +||+||||||+|||+
T Consensus        50 ~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll  129 (325)
T cd05594          50 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML  129 (325)
T ss_pred             HhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE
Confidence            3467999999999999999999999999999999999888889999999999999999999997 799999999999999


Q ss_pred             cCCCCEEEeeccCccccC-CCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCcccc-----------
Q psy2648         546 DSEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFK-----------  613 (708)
Q Consensus       546 ~~~~~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~-----------  613 (708)
                      +.++.+||+|||+++... ........+||+.|||||++.+......++-++.+.+......+......           
T Consensus       130 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~  209 (325)
T cd05594         130 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL  209 (325)
T ss_pred             CCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh
Confidence            999999999999987543 23334567899999999999877655555555544444333222111100           


Q ss_pred             ----ccccccccchhhhHHHHhhCCCCCCCCCCCCc
Q psy2648         614 ----RQNTIDSASIKENTARLNAGRPAKNTASIAPL  645 (708)
Q Consensus       614 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  645 (708)
                          ......+..+.+++.+++.-+|.+|.+...|.
T Consensus       210 ~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~  245 (325)
T cd05594         210 MEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDD  245 (325)
T ss_pred             cCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCC
Confidence                00112366788999999999999997654443


No 459
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.90  E-value=4.1e-23  Score=205.61  Aligned_cols=143  Identities=23%  Similarity=0.245  Sum_probs=115.1

Q ss_pred             EEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChh----------------------h--HHHHHHHHHHHHhCCCC
Q psy2648          50 LLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----------------------S--LQKLFREVRIMKMLDHP  105 (708)
Q Consensus        50 i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~----------------------~--~~~~~~Ei~il~~l~Hp  105 (708)
                      +.+.||+|+||.||+|.+. +|+.||||++++......                      .  ...+.+|.+.+.++.|+
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   79 (190)
T cd05145           1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA   79 (190)
T ss_pred             CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            3578999999999999987 899999999986532100                      0  11235799999999999


Q ss_pred             CeeeEEEEEEeCCEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCCEEEcCCCcE
Q psy2648         106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ-KKIIHRDLKAENLLLDSEMNI  184 (708)
Q Consensus       106 nIv~l~~~~~~~~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~-~gIvHRDLKPeNILld~~~~i  184 (708)
                      +|.....+....  .||||||++|+++.........+++.++..++.|++.+|.++|+ +||+||||||+|||++ ++.+
T Consensus        80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~  156 (190)
T cd05145          80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKP  156 (190)
T ss_pred             CCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCE
Confidence            875443333222  48999999998665544456778999999999999999999999 9999999999999999 8899


Q ss_pred             EEEeccCccccC
Q psy2648         185 KIADFGFSNEFT  196 (708)
Q Consensus       185 KL~DFGls~~~~  196 (708)
                      +|+|||++....
T Consensus       157 ~liDFG~a~~~~  168 (190)
T cd05145         157 YIIDVSQAVELD  168 (190)
T ss_pred             EEEEcccceecC
Confidence            999999987654


No 460
>KOG0580|consensus
Probab=99.90  E-value=1.9e-24  Score=213.08  Aligned_cols=207  Identities=28%  Similarity=0.418  Sum_probs=150.6

Q ss_pred             cCCCCCCCCCCcCCCccccccccccccc----------------cCcccccccccCceeEEEEEEEeCCEEEEEEeccCC
Q psy2648         433 GGSGGGGGGGAAQSPSHRGVHRSISASN----------------AKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASG  496 (708)
Q Consensus       433 ~~~~ggg~~g~v~s~~hr~~~R~i~~~~----------------~~~~~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~g  496 (708)
                      +.-.|.|-||-|+..+++..+.-+..+.                .+-..+....||||++||.+|.++..+||++||...
T Consensus        27 gr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~  106 (281)
T KOG0580|consen   27 GRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPR  106 (281)
T ss_pred             cccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCC
Confidence            3345667777776666555443222211                122234567999999999999999999999999999


Q ss_pred             CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCCCEEEeeccCccccCCCCcccccccC
Q psy2648         497 GEVFDYLV--LHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGS  574 (708)
Q Consensus       497 g~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~Gt  574 (708)
                      |+|+..|.  ...+|+|..+..|+.|++.||.|||.++||||||||+|+|++..+.+|++|||-+-... .....+.|||
T Consensus       107 gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-~~kR~tlcgt  185 (281)
T KOG0580|consen  107 GELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-SNKRKTLCGT  185 (281)
T ss_pred             chHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC-CCCceeeecc
Confidence            99999998  66679999999999999999999999999999999999999999999999999876543 5667789999


Q ss_pred             CcccccccccCCCCccCCCCCCCCCcccCCC--CCCCcc------c--cccc-----cccccchhhhHHHHhhCCCCCCC
Q psy2648         575 PPYAAPELFQGGAPVTSSGGAGTNHTHNSSI--SPAPTN------F--KRQN-----TIDSASIKENTARLNAGRPAKNT  639 (708)
Q Consensus       575 ~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~--~~~~~~------~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  639 (708)
                      .-|.+||.+.+......-.-+...-.++.-+  .|+...      +  .++.     ..-+..++|+..||+...|.++.
T Consensus       186 ~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~  265 (281)
T KOG0580|consen  186 LDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAADLISRLLVKNPIERL  265 (281)
T ss_pred             cccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHHHHHHHhccCccccc
Confidence            9999999998765333222221111111111  111110      0  0111     22377889999999999888876


Q ss_pred             C
Q psy2648         640 A  640 (708)
Q Consensus       640 ~  640 (708)
                      .
T Consensus       266 ~  266 (281)
T KOG0580|consen  266 A  266 (281)
T ss_pred             c
Confidence            4


No 461
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90  E-value=1.7e-23  Score=212.23  Aligned_cols=172  Identities=15%  Similarity=0.158  Sum_probs=134.9

Q ss_pred             cCCeEEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCCh-hhHHH------HHHHHHHHHhCCCCCeeeEEEEEEeC
Q psy2648          45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNP-GSLQK------LFREVRIMKMLDHPNIVKLFQVIETE  117 (708)
Q Consensus        45 ~~~Y~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~-~~~~~------~~~Ei~il~~l~HpnIv~l~~~~~~~  117 (708)
                      -++|++.+.||.|+||.||++..  ++..||||++....... ...++      +.+|++.+.+++||+|..+.+++...
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~  107 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA  107 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence            36899999999999999999755  47789999997654432 22233      46899999999999999999886643


Q ss_pred             --------CEEEEEEeccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCCCCEEEcCCCcEEEEec
Q psy2648         118 --------KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADF  189 (708)
Q Consensus       118 --------~~~ylVmEy~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDLKPeNILld~~~~iKL~DF  189 (708)
                              ...||||||++|.+|.++.    .+++    ....||+.+|..||++|++|||+||.|||++.+| ++|+||
T Consensus       108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDf  178 (232)
T PRK10359        108 ERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDL  178 (232)
T ss_pred             ccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEEC
Confidence                    3579999999999998863    2333    2456999999999999999999999999999999 999999


Q ss_pred             cCccccCCCCCccccccCCcccccccccCCccCCCchhHHHHHHHHHHHH
Q psy2648         190 GFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV  239 (708)
Q Consensus       190 Gls~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~DIWSlGvilyell  239 (708)
                      |...........           ..++....|. .++|+|||||.+..+.
T Consensus       179 g~~~~~~e~~a~-----------d~~vler~y~-~~~di~~lg~~~~~~~  216 (232)
T PRK10359        179 SGKRCTAQRKAK-----------DRIDLERHYG-IKNEIKDLGYYLLIYK  216 (232)
T ss_pred             CCcccccchhhH-----------HHHHHHhHhc-ccccccceeEeehHHH
Confidence            987655322111           1144555676 7899999999876543


No 462
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.90  E-value=1.4e-23  Score=231.02  Aligned_cols=94  Identities=33%  Similarity=0.641  Sum_probs=89.9

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|++||+++++|+++..+|||||||++|+|.+++.+.+.+++..++.++.||+.||.|||++|||||||||+|||++
T Consensus        56 ~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~  135 (382)
T cd05625          56 AEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILID  135 (382)
T ss_pred             HhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence            44589999999999999999999999999999999998888899999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCcc
Q psy2648         547 SEMNIKIADFGFSN  560 (708)
Q Consensus       547 ~~~~vKl~DFGla~  560 (708)
                      .++.+||+|||+++
T Consensus       136 ~~g~~kL~DFGla~  149 (382)
T cd05625         136 RDGHIKLTDFGLCT  149 (382)
T ss_pred             CCCCEEEeECCCCc
Confidence            99999999999975


No 463
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.89  E-value=1.4e-23  Score=226.43  Aligned_cols=179  Identities=31%  Similarity=0.375  Sum_probs=138.4

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+||+++++++++++.+||||||+++|+|..++...+.+++.++..++.||+.||.|||++||+||||||+|||++
T Consensus        50 ~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~  129 (328)
T cd05593          50 KNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD  129 (328)
T ss_pred             HhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEEC
Confidence            44579999999999999999999999999999999998888899999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccC-CCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCC-----CCCCcccc-------
Q psy2648         547 SEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSI-----SPAPTNFK-------  613 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~-----~~~~~~~~-------  613 (708)
                      .++.+||+|||+++... ........+||+.|+|||++.+......++-++.+.+.....     ........       
T Consensus       130 ~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~  209 (328)
T cd05593         130 KDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM  209 (328)
T ss_pred             CCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc
Confidence            99999999999987643 223345678999999999998766544454444333322221     11111000       


Q ss_pred             cc---ccccccchhhhHHHHhhCCCCCCCCCCCCc
Q psy2648         614 RQ---NTIDSASIKENTARLNAGRPAKNTASIAPL  645 (708)
Q Consensus       614 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  645 (708)
                      ..   ...-+..+.+++.+++.-.|.+|.+...|.
T Consensus       210 ~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~  244 (328)
T cd05593         210 EDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDD  244 (328)
T ss_pred             CCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCC
Confidence            00   011256788999999999999997654443


No 464
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.89  E-value=2.6e-23  Score=223.79  Aligned_cols=176  Identities=26%  Similarity=0.345  Sum_probs=138.9

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+||++++++|+.++.+|||||||++|+|..++...+.+++.++..++.||+.||.|||++||+||||||+|||++
T Consensus        51 ~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~  130 (325)
T cd05604          51 KNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLD  130 (325)
T ss_pred             HhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC
Confidence            34689999999999999999999999999999999998888999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccC-CCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCcccc------------
Q psy2648         547 SEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFK------------  613 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~------------  613 (708)
                      .++.+||+|||+++... ........+||+.|||||++.+......++-++.+.+......+......            
T Consensus       131 ~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~  210 (325)
T cd05604         131 SQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH  210 (325)
T ss_pred             CCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc
Confidence            99999999999987542 22334567899999999999877655555544444443333221111100            


Q ss_pred             ---ccccccccchhhhHHHHhhCCCCCCCCCC
Q psy2648         614 ---RQNTIDSASIKENTARLNAGRPAKNTASI  642 (708)
Q Consensus       614 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  642 (708)
                         ...+-.+..+.+++.+++..+|.+|....
T Consensus       211 ~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~  242 (325)
T cd05604         211 KPLVLRPGASLTAWSILEELLEKDRQRRLGAK  242 (325)
T ss_pred             CCccCCCCCCHHHHHHHHHHhccCHHhcCCCC
Confidence               01112355677899999999999997653


No 465
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=99.89  E-value=1.8e-23  Score=225.00  Aligned_cols=176  Identities=28%  Similarity=0.367  Sum_probs=138.3

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+||+++++++++.+.+|||||||++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        51 ~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~  130 (325)
T cd05602          51 KNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD  130 (325)
T ss_pred             HhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC
Confidence            34689999999999999999999999999999999998888899999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccC-CCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCccc------------c
Q psy2648         547 SEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNF------------K  613 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~------------~  613 (708)
                      .++.+||+|||+++... ........+||+.|||||++.+......++-++.+.+......+.....            .
T Consensus       131 ~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  210 (325)
T cd05602         131 SQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN  210 (325)
T ss_pred             CCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh
Confidence            99999999999997542 2333456789999999999987665555554443333322221111100            0


Q ss_pred             ---ccccccccchhhhHHHHhhCCCCCCCCCC
Q psy2648         614 ---RQNTIDSASIKENTARLNAGRPAKNTASI  642 (708)
Q Consensus       614 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  642 (708)
                         ...+--+..+++++.+++...|.+|....
T Consensus       211 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (325)
T cd05602         211 KPLQLKPNITNSARHLLEGLLQKDRTKRLGAK  242 (325)
T ss_pred             CCcCCCCCCCHHHHHHHHHHcccCHHHCCCCC
Confidence               01112256778999999999999998654


No 466
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.89  E-value=2.1e-23  Score=225.06  Aligned_cols=121  Identities=37%  Similarity=0.649  Sum_probs=109.6

Q ss_pred             cccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCC
Q psy2648         469 SGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE  548 (708)
Q Consensus       469 ~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~  548 (708)
                      ..|+||++++++|++...+|||||||++|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus        53 ~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~  132 (329)
T cd05588          53 SNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAE  132 (329)
T ss_pred             cCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC
Confidence            37999999999999999999999999999999999888899999999999999999999999999999999999999999


Q ss_pred             CCEEEeeccCcccc-CCCCcccccccCCcccccccccCCCCc
Q psy2648         549 MNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGGAPV  589 (708)
Q Consensus       549 ~~vKl~DFGla~~~-~~~~~~~~~~Gt~~Y~APEvl~g~~~~  589 (708)
                      +.+||+|||+++.. .........+||+.|+|||++.+....
T Consensus       133 ~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (329)
T cd05588         133 GHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYG  174 (329)
T ss_pred             CCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCC
Confidence            99999999998753 333445567899999999999875533


No 467
>KOG0589|consensus
Probab=99.89  E-value=1.3e-23  Score=227.59  Aligned_cols=194  Identities=23%  Similarity=0.370  Sum_probs=152.0

Q ss_pred             CCCCCCCCCCcCCCcccccccccccccc------Cccc---------ccccccCceeEEEEEEEeCCE-EEEEEeccCCC
Q psy2648         434 GSGGGGGGGAAQSPSHRGVHRSISASNA------KPSR---------RASSGGETLLKLFQVIETEKT-LYLVMEYASGG  497 (708)
Q Consensus       434 ~~~ggg~~g~v~s~~hr~~~R~i~~~~~------~~~~---------~~~~~~~~Iv~L~~~~~~~~~-~yLVmEy~~gg  497 (708)
                      ...|.|+||.+..+.|+.....+..+..      .+.+         .....|||||...+.|..++. ++||||||+||
T Consensus        10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg   89 (426)
T KOG0589|consen   10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGG   89 (426)
T ss_pred             hhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCC
Confidence            3457788998888888877664333211      1111         133699999999999999988 99999999999


Q ss_pred             CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCCCEEEeeccCccccCCCC-cccccccC
Q psy2648         498 EVFDYLVLHG--RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGS  574 (708)
Q Consensus       498 ~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~-~~~~~~Gt  574 (708)
                      +|.+.|.+++  .|+|+.+..|+.|++.||.|||++.|+|||||+.||++++++.|||.|||+|+.+.+.. ...+.+||
T Consensus        90 ~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGT  169 (426)
T KOG0589|consen   90 DLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGT  169 (426)
T ss_pred             CHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCC
Confidence            9999997654  59999999999999999999999999999999999999999999999999999998776 67889999


Q ss_pred             CcccccccccCCCCccCCCCCCCCCcccCCCCCCCccccccccccccchhhhHHHHhhCC
Q psy2648         575 PPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASIKENTARLNAGR  634 (708)
Q Consensus       575 ~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  634 (708)
                      |.||.||++.+-.+-..++-|..++-.+..-       --+..+.+.+...+..++..+.
T Consensus       170 p~YmcPEil~d~pYn~KSDiWsLGC~~yEm~-------~lk~aF~a~~m~~Li~ki~~~~  222 (426)
T KOG0589|consen  170 PYYMCPEILSDIPYNEKSDIWSLGCCLYEMC-------TLKPAFKASNMSELILKINRGL  222 (426)
T ss_pred             CcccCHHHhCCCCCCccCcchhhcchHHHHH-------hcccccCccchHHHHHHHhhcc
Confidence            9999999999877666665554333322211       2234455666666666666655


No 468
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=99.89  E-value=1.8e-23  Score=229.86  Aligned_cols=94  Identities=31%  Similarity=0.563  Sum_probs=90.2

Q ss_pred             ccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecC
Q psy2648         468 SSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS  547 (708)
Q Consensus       468 ~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~  547 (708)
                      ...|+|||+++++|++...+|||||||++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus        57 ~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~  136 (377)
T cd05629          57 ESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDR  136 (377)
T ss_pred             hCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC
Confidence            46899999999999999999999999999999999988889999999999999999999999999999999999999999


Q ss_pred             CCCEEEeeccCccc
Q psy2648         548 EMNIKIADFGFSNE  561 (708)
Q Consensus       548 ~~~vKl~DFGla~~  561 (708)
                      ++.+||+|||+|+.
T Consensus       137 ~~~~kl~DfGla~~  150 (377)
T cd05629         137 GGHIKLSDFGLSTG  150 (377)
T ss_pred             CCCEEEeecccccc
Confidence            99999999999863


No 469
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.89  E-value=2.8e-23  Score=223.93  Aligned_cols=172  Identities=27%  Similarity=0.368  Sum_probs=134.5

Q ss_pred             ccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCC
Q psy2648         470 GGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM  549 (708)
Q Consensus       470 ~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~  549 (708)
                      .|++|++++++|++...+|||||||++|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus        54 ~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~  133 (330)
T cd05586          54 ESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG  133 (330)
T ss_pred             CCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC
Confidence            79999999999999999999999999999999999888999999999999999999999999999999999999999999


Q ss_pred             CEEEeeccCccccC-CCCcccccccCCcccccccccCCCCcc-CCCCCCCCCcccCCCCCCCcccc------------c-
Q psy2648         550 NIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGGAPVT-SSGGAGTNHTHNSSISPAPTNFK------------R-  614 (708)
Q Consensus       550 ~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~APEvl~g~~~~~-~s~~~~~~~~~~~~~~~~~~~~~------------~-  614 (708)
                      .+||+|||+++... ........+||+.|||||++.+...++ .++-++.+.+......+......            . 
T Consensus       134 ~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~  213 (330)
T cd05586         134 HIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGK  213 (330)
T ss_pred             CEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCC
Confidence            99999999987543 233345678999999999998654333 34434333333322211111000            0 


Q ss_pred             ---cccccccchhhhHHHHhhCCCCCCCCC
Q psy2648         615 ---QNTIDSASIKENTARLNAGRPAKNTAS  641 (708)
Q Consensus       615 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~  641 (708)
                         ....-+..+.+++.+++.-+|.+|...
T Consensus       214 ~~~~~~~~~~~~~~li~~~L~~~P~~R~~~  243 (330)
T cd05586         214 VRFPKNVLSDEGRQFVKGLLNRNPQHRLGA  243 (330)
T ss_pred             CCCCCccCCHHHHHHHHHHcCCCHHHCCCC
Confidence               001235667889999999999999753


No 470
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.89  E-value=3.1e-23  Score=222.64  Aligned_cols=175  Identities=27%  Similarity=0.374  Sum_probs=137.6

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+|||+++++|++.+.+|||||||++|+|..++.....+++.++..++.||+.||.|||++||+||||||+|||++
T Consensus        51 ~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~  130 (321)
T cd05603          51 KNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLD  130 (321)
T ss_pred             HhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC
Confidence            45689999999999999999999999999999999998888899999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCcccc-CCCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCcccc------------
Q psy2648         547 SEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFK------------  613 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~-~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~------------  613 (708)
                      .++.+||+|||+++.. .........+||+.|+|||++.+......++-++.+.+......+......            
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  210 (321)
T cd05603         131 SQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH  210 (321)
T ss_pred             CCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhc
Confidence            9999999999998763 223334567899999999999876544445544444343333221111100            


Q ss_pred             ---ccccccccchhhhHHHHhhCCCCCCCCC
Q psy2648         614 ---RQNTIDSASIKENTARLNAGRPAKNTAS  641 (708)
Q Consensus       614 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  641 (708)
                         ......+..+.+++.+++...|.+|.+.
T Consensus       211 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  241 (321)
T cd05603         211 KPLQLPGGKTVAACDLLVGLLHKDQRRRLGA  241 (321)
T ss_pred             CCCCCCCCCCHHHHHHHHHHccCCHhhcCCC
Confidence               0011234567889999999999999765


No 471
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.89  E-value=1.3e-22  Score=202.12  Aligned_cols=187  Identities=16%  Similarity=0.162  Sum_probs=143.2

Q ss_pred             EEEeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCC--hhhHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEEEEe
Q psy2648          49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN--PGSLQKLFREVRIMKMLD-HPNIVKLFQVIETEKTLYLVME  125 (708)
Q Consensus        49 ~i~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~--~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ylVmE  125 (708)
                      .+...|++|+||+|+++..  .+.+|+.+.+.....-  .-....+.+|+++|++|+ |++|++++++    ...|++||
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme   78 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS   78 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence            4567899999999998765  6778887777644331  112235779999999996 5889999886    34699999


Q ss_pred             ccCCCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCC-CCCCEEEcCCCcEEEEeccCccccCCCCCc---
Q psy2648         126 YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDL-KAENLLLDSEMNIKIADFGFSNEFTPGNKL---  201 (708)
Q Consensus       126 y~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL~yLH~~gIvHRDL-KPeNILld~~~~iKL~DFGls~~~~~~~~~---  201 (708)
                      |+.|.+|.+.+..      . ...++.|++.+|++||++||+|||| ||+|||++.++.++|+|||++.........   
T Consensus        79 yI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~  151 (218)
T PRK12274         79 YLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRL  151 (218)
T ss_pred             eecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHH
Confidence            9999998754321      1 2457899999999999999999999 799999999999999999999865543321   


Q ss_pred             -c----------ccccCCcccccccccCC-ccCCCchhHHHHHHHHHHHHcCCCCCCCC
Q psy2648         202 -D----------TFCGSPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPFDGS  248 (708)
Q Consensus       202 -~----------~~~Gt~~Y~APE~l~~~-~~~~~~~DIWSlGvilyelltG~~Pf~~~  248 (708)
                       .          -...++.|++|+...-. ..+-...++++.|.-+|.|+|+.+|+.+.
T Consensus       152 L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        152 LAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence             0          11257888999865432 12225679999999999999999998654


No 472
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.89  E-value=2.5e-23  Score=229.18  Aligned_cols=95  Identities=32%  Similarity=0.586  Sum_probs=90.4

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|++||++++++++.+.+|||||||++|+|.+++...+.+++..++.++.||+.||.|||++|||||||||+|||++
T Consensus        56 ~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~  135 (381)
T cd05626          56 AEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILID  135 (381)
T ss_pred             HhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEEC
Confidence            34589999999999999999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccc
Q psy2648         547 SEMNIKIADFGFSNE  561 (708)
Q Consensus       547 ~~~~vKl~DFGla~~  561 (708)
                      ..+.+||+|||+++.
T Consensus       136 ~~~~~kL~DFGl~~~  150 (381)
T cd05626         136 LDGHIKLTDFGLCTG  150 (381)
T ss_pred             CCCCEEEeeCcCCcc
Confidence            999999999999753


No 473
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.89  E-value=3.7e-23  Score=221.35  Aligned_cols=127  Identities=34%  Similarity=0.562  Sum_probs=112.1

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+|||+++++|.++..+|||||||++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus        48 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~  127 (312)
T cd05585          48 AQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLD  127 (312)
T ss_pred             HhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEEC
Confidence            34589999999999999999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccCC-CCcccccccCCcccccccccCCCCccCCC
Q psy2648         547 SEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPELFQGGAPVTSSG  593 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~~-~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~  593 (708)
                      .++.+||+|||+++.... .......+||+.|+|||++.+......++
T Consensus       128 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  175 (312)
T cd05585         128 YQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVD  175 (312)
T ss_pred             CCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccc
Confidence            999999999999875432 23345578999999999998765444443


No 474
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.89  E-value=3.7e-23  Score=222.45  Aligned_cols=176  Identities=29%  Similarity=0.374  Sum_probs=138.9

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+||+++++++++.+.+|||||||++|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus        51 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~  130 (323)
T cd05575          51 KNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD  130 (323)
T ss_pred             hhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC
Confidence            34689999999999999999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccC-CCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCccc-------------
Q psy2648         547 SEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNF-------------  612 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~-------------  612 (708)
                      .++.+||+|||+++... ........+||+.|||||++.+......++-++.+.+............             
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~  210 (323)
T cd05575         131 SQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILN  210 (323)
T ss_pred             CCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence            99999999999987542 2333455789999999999987665444544443333333221111100             


Q ss_pred             --cccccccccchhhhHHHHhhCCCCCCCCCC
Q psy2648         613 --KRQNTIDSASIKENTARLNAGRPAKNTASI  642 (708)
Q Consensus       613 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  642 (708)
                        ....+.-+..+.+++.+++...|.+|....
T Consensus       211 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         211 KPLRLKPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             CCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence              011112266788999999999999998764


No 475
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.89  E-value=2e-23  Score=227.98  Aligned_cols=126  Identities=32%  Similarity=0.553  Sum_probs=109.2

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+||++++++|+++..+|||||||++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        56 ~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~  135 (364)
T cd05599          56 AEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLD  135 (364)
T ss_pred             HhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC
Confidence            34579999999999999999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccCCCC---------------------------------------cccccccCCcccccccccCCC
Q psy2648         547 SEMNIKIADFGFSNEFTPGN---------------------------------------KLDTFCGSPPYAAPELFQGGA  587 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~~~~---------------------------------------~~~~~~Gt~~Y~APEvl~g~~  587 (708)
                      .++.+||+|||+++.+....                                       ...+.+||+.|||||++.+..
T Consensus       136 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  215 (364)
T cd05599         136 AKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTG  215 (364)
T ss_pred             CCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCC
Confidence            99999999999986542111                                       112357999999999997655


Q ss_pred             CccCC
Q psy2648         588 PVTSS  592 (708)
Q Consensus       588 ~~~~s  592 (708)
                      ....+
T Consensus       216 ~~~~~  220 (364)
T cd05599         216 YNKEC  220 (364)
T ss_pred             CCCee
Confidence            43333


No 476
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.89  E-value=4.3e-23  Score=221.40  Aligned_cols=128  Identities=39%  Similarity=0.605  Sum_probs=112.6

Q ss_pred             ccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecC
Q psy2648         468 SSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS  547 (708)
Q Consensus       468 ~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~  547 (708)
                      ...|+||+++++++++...+|||||||++|+|..++...+.+++..+..++.||+.||.|||+++|+||||||+|||++.
T Consensus        52 ~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~  131 (316)
T cd05592          52 AWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDK  131 (316)
T ss_pred             ccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECC
Confidence            34799999999999999999999999999999999988889999999999999999999999999999999999999999


Q ss_pred             CCCEEEeeccCccccCC-CCcccccccCCcccccccccCCCCccCCCCC
Q psy2648         548 EMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPELFQGGAPVTSSGGA  595 (708)
Q Consensus       548 ~~~vKl~DFGla~~~~~-~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~  595 (708)
                      ++.+||+|||+++.... .......+||+.|||||++.+......++-+
T Consensus       132 ~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvw  180 (316)
T cd05592         132 DGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWW  180 (316)
T ss_pred             CCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccch
Confidence            99999999999976432 2334567899999999999876544444333


No 477
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.89  E-value=4e-23  Score=224.24  Aligned_cols=176  Identities=26%  Similarity=0.355  Sum_probs=138.5

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+|||++++++.++..+|||||||++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus        86 ~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~  165 (340)
T PTZ00426         86 NYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD  165 (340)
T ss_pred             HhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC
Confidence            34579999999999999999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccCCCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCc-----ccc--------
Q psy2648         547 SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPT-----NFK--------  613 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~-----~~~--------  613 (708)
                      .++.+||+|||+++....  .....+||+.|||||++.+......++-++.+.+......+...     ...        
T Consensus       166 ~~~~ikL~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~  243 (340)
T PTZ00426        166 KDGFIKMTDFGFAKVVDT--RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEG  243 (340)
T ss_pred             CCCCEEEecCCCCeecCC--CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcC
Confidence            999999999999986543  23457899999999999876554445444433333222211111     100        


Q ss_pred             --ccccccccchhhhHHHHhhCCCCCCCCCCCC
Q psy2648         614 --RQNTIDSASIKENTARLNAGRPAKNTASIAP  644 (708)
Q Consensus       614 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (708)
                        .....-+..+++++.+++..+|.+|.+...|
T Consensus       244 ~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~  276 (340)
T PTZ00426        244 IIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKK  276 (340)
T ss_pred             CCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCC
Confidence              0011125567899999999999999765444


No 478
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=99.89  E-value=3.6e-23  Score=227.15  Aligned_cols=119  Identities=33%  Similarity=0.562  Sum_probs=106.8

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+||++++++|+++..+|||||||++|+|.+++... .+++.+++.++.||+.||.|||+++|+||||||+|||++
T Consensus        98 ~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~  176 (370)
T cd05621          98 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD  176 (370)
T ss_pred             HhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC
Confidence            3468999999999999999999999999999999988654 689999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccCCCC--cccccccCCcccccccccCC
Q psy2648         547 SEMNIKIADFGFSNEFTPGN--KLDTFCGSPPYAAPELFQGG  586 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~~~~--~~~~~~Gt~~Y~APEvl~g~  586 (708)
                      .++.+||+|||+|.......  ...+.+||+.|||||++.+.
T Consensus       177 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~  218 (370)
T cd05621         177 KHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQ  218 (370)
T ss_pred             CCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhcc
Confidence            99999999999998764332  23467899999999999764


No 479
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.89  E-value=4.7e-23  Score=221.80  Aligned_cols=127  Identities=38%  Similarity=0.586  Sum_probs=112.0

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+||++++++|...+.+|||||||++|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        50 ~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~  129 (323)
T cd05595          50 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD  129 (323)
T ss_pred             HhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEc
Confidence            34579999999999999999999999999999999998888899999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccC-CCCcccccccCCcccccccccCCCCccCCC
Q psy2648         547 SEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGGAPVTSSG  593 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~  593 (708)
                      .++.+||+|||+++... ........+||+.|||||++.+......++
T Consensus       130 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  177 (323)
T cd05595         130 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVD  177 (323)
T ss_pred             CCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhc
Confidence            99999999999987642 233345578999999999998765444443


No 480
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.89  E-value=5.5e-23  Score=220.86  Aligned_cols=128  Identities=33%  Similarity=0.499  Sum_probs=112.3

Q ss_pred             cccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCC
Q psy2648         469 SGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE  548 (708)
Q Consensus       469 ~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~  548 (708)
                      ..|++|++++++|+++..+|||||||++|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus        53 ~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~  132 (321)
T cd05591          53 AKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAE  132 (321)
T ss_pred             cCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC
Confidence            47999999999999999999999999999999999888899999999999999999999999999999999999999999


Q ss_pred             CCEEEeeccCccccC-CCCcccccccCCcccccccccCCCCccCCCCCC
Q psy2648         549 MNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAG  596 (708)
Q Consensus       549 ~~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~  596 (708)
                      +.+||+|||+++... ........+||+.|+|||++.+......++-++
T Consensus       133 ~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws  181 (321)
T cd05591         133 GHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWA  181 (321)
T ss_pred             CCEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceec
Confidence            999999999987543 233345678999999999998765444444333


No 481
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.89  E-value=6.1e-23  Score=221.54  Aligned_cols=127  Identities=38%  Similarity=0.610  Sum_probs=112.0

Q ss_pred             cccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCC
Q psy2648         469 SGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE  548 (708)
Q Consensus       469 ~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~  548 (708)
                      ..|+|||++++++.+...+|||||||++|+|..++...+.+++..++.++.||+.||.|||+++|+||||||+|||++.+
T Consensus        53 ~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~  132 (329)
T cd05618          53 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE  132 (329)
T ss_pred             CCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC
Confidence            47999999999999999999999999999999999888899999999999999999999999999999999999999999


Q ss_pred             CCEEEeeccCcccc-CCCCcccccccCCcccccccccCCCCccCCCCC
Q psy2648         549 MNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGA  595 (708)
Q Consensus       549 ~~vKl~DFGla~~~-~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~  595 (708)
                      +.+||+|||+++.. .........+||+.|+|||++.+......++-+
T Consensus       133 ~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  180 (329)
T cd05618         133 GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWW  180 (329)
T ss_pred             CCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCcccee
Confidence            99999999998753 233344567899999999999876544444333


No 482
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.89  E-value=6.4e-23  Score=221.15  Aligned_cols=121  Identities=36%  Similarity=0.654  Sum_probs=109.4

Q ss_pred             cccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCC
Q psy2648         469 SGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE  548 (708)
Q Consensus       469 ~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~  548 (708)
                      ..|++|++++++|++...+|||||||++|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus        53 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~  132 (327)
T cd05617          53 SSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDAD  132 (327)
T ss_pred             cCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCC
Confidence            47899999999999999999999999999999999888899999999999999999999999999999999999999999


Q ss_pred             CCEEEeeccCcccc-CCCCcccccccCCcccccccccCCCCc
Q psy2648         549 MNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGGAPV  589 (708)
Q Consensus       549 ~~vKl~DFGla~~~-~~~~~~~~~~Gt~~Y~APEvl~g~~~~  589 (708)
                      +.+||+|||+++.. .........+||+.|+|||++.+....
T Consensus       133 ~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (327)
T cd05617         133 GHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYG  174 (327)
T ss_pred             CCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCC
Confidence            99999999998753 233344567899999999999866543


No 483
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.88  E-value=5.9e-23  Score=220.73  Aligned_cols=127  Identities=37%  Similarity=0.541  Sum_probs=111.7

Q ss_pred             cccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCC
Q psy2648         469 SGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE  548 (708)
Q Consensus       469 ~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~  548 (708)
                      ..|+||++++++|++.+.+|||||||++|+|.+++...+.+++..+..++.||+.||.|||+++|+||||||+|||++.+
T Consensus        53 ~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~  132 (320)
T cd05590          53 RNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHE  132 (320)
T ss_pred             cCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC
Confidence            36999999999999999999999999999999999888899999999999999999999999999999999999999999


Q ss_pred             CCEEEeeccCccccC-CCCcccccccCCcccccccccCCCCccCCCCC
Q psy2648         549 MNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGGAPVTSSGGA  595 (708)
Q Consensus       549 ~~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~  595 (708)
                      +.+||+|||+++... ........+||+.|||||++.+......++-+
T Consensus       133 ~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  180 (320)
T cd05590         133 GHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWW  180 (320)
T ss_pred             CcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchh
Confidence            999999999987642 23334567899999999999866544444333


No 484
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.88  E-value=4.3e-23  Score=226.63  Aligned_cols=136  Identities=28%  Similarity=0.489  Sum_probs=113.8

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|++|++++++|++++.+|||||||++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        56 ~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~  135 (376)
T cd05598          56 AEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID  135 (376)
T ss_pred             HhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEEC
Confidence            34689999999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccCCC--------------------------------------------CcccccccCCccccccc
Q psy2648         547 SEMNIKIADFGFSNEFTPG--------------------------------------------NKLDTFCGSPPYAAPEL  582 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~~~--------------------------------------------~~~~~~~Gt~~Y~APEv  582 (708)
                      .++.+||+|||+|..+...                                            ......+||+.|||||+
T Consensus       136 ~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  215 (376)
T cd05598         136 RDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEV  215 (376)
T ss_pred             CCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHH
Confidence            9999999999997532100                                            00124589999999999


Q ss_pred             ccCCCCccCCCCCCCCCccc
Q psy2648         583 FQGGAPVTSSGGAGTNHTHN  602 (708)
Q Consensus       583 l~g~~~~~~s~~~~~~~~~~  602 (708)
                      +.+......++-++.+.+..
T Consensus       216 ~~~~~~~~~~DiwSlGvily  235 (376)
T cd05598         216 LLRTGYTQLCDWWSVGVILY  235 (376)
T ss_pred             HcCCCCCcceeeeeccceee
Confidence            98766544554444444433


No 485
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.88  E-value=8.2e-23  Score=219.26  Aligned_cols=124  Identities=38%  Similarity=0.588  Sum_probs=110.4

Q ss_pred             cccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCC
Q psy2648         469 SGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE  548 (708)
Q Consensus       469 ~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~  548 (708)
                      ..|++|++++++|++.+.+|||||||.+|+|..++...+.+++.++..++.||+.||.|||++||+||||||+|||++.+
T Consensus        53 ~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~  132 (316)
T cd05620          53 WENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRD  132 (316)
T ss_pred             cCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC
Confidence            47899999999999999999999999999999999888899999999999999999999999999999999999999999


Q ss_pred             CCEEEeeccCccccCC-CCcccccccCCcccccccccCCCCccCC
Q psy2648         549 MNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPELFQGGAPVTSS  592 (708)
Q Consensus       549 ~~vKl~DFGla~~~~~-~~~~~~~~Gt~~Y~APEvl~g~~~~~~s  592 (708)
                      +.+||+|||+++.... .......+||+.|+|||++.+......+
T Consensus       133 ~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  177 (316)
T cd05620         133 GHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSV  177 (316)
T ss_pred             CCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCccc
Confidence            9999999999875322 2234567899999999999876544334


No 486
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.88  E-value=8.9e-23  Score=219.45  Aligned_cols=127  Identities=39%  Similarity=0.542  Sum_probs=111.9

Q ss_pred             cccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCC
Q psy2648         469 SGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE  548 (708)
Q Consensus       469 ~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~  548 (708)
                      ..+++|+++++++++.+.+|||||||++|+|.+++...+.+++.++..++.||+.||.|||++||+||||||+|||++.+
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~  137 (323)
T cd05616          58 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE  137 (323)
T ss_pred             cCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCC
Confidence            46789999999999999999999999999999999888899999999999999999999999999999999999999999


Q ss_pred             CCEEEeeccCccccC-CCCcccccccCCcccccccccCCCCccCCCCC
Q psy2648         549 MNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGGAPVTSSGGA  595 (708)
Q Consensus       549 ~~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~  595 (708)
                      +.+||+|||+++... ........+||+.|||||++.+......++-+
T Consensus       138 ~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  185 (323)
T cd05616         138 GHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWW  185 (323)
T ss_pred             CcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchh
Confidence            999999999997643 23344567899999999999876644444333


No 487
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.88  E-value=1.4e-22  Score=221.34  Aligned_cols=173  Identities=25%  Similarity=0.392  Sum_probs=131.5

Q ss_pred             ccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecC
Q psy2648         468 SSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS  547 (708)
Q Consensus       468 ~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~  547 (708)
                      ...|++|++++++|++...+|||||||+||+|.+++.+.+.+++..++.++.||+.||.|||++|||||||||+|||++.
T Consensus        57 ~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~  136 (360)
T cd05627          57 EADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDA  136 (360)
T ss_pred             hCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC
Confidence            45789999999999999999999999999999999998889999999999999999999999999999999999999999


Q ss_pred             CCCEEEeeccCccccCCCC------------------------------------cccccccCCcccccccccCCCCccC
Q psy2648         548 EMNIKIADFGFSNEFTPGN------------------------------------KLDTFCGSPPYAAPELFQGGAPVTS  591 (708)
Q Consensus       548 ~~~vKl~DFGla~~~~~~~------------------------------------~~~~~~Gt~~Y~APEvl~g~~~~~~  591 (708)
                      ++.+||+|||+++......                                    ...+.+||+.|||||++.+......
T Consensus       137 ~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~  216 (360)
T cd05627         137 KGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKL  216 (360)
T ss_pred             CCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCc
Confidence            9999999999986542110                                    1124689999999999987665555


Q ss_pred             CCCCCCCCcccCCCCCCC-----ccc---------ccccc-----ccccchhhhHHHHhhCCCCCCCCC
Q psy2648         592 SGGAGTNHTHNSSISPAP-----TNF---------KRQNT-----IDSASIKENTARLNAGRPAKNTAS  641 (708)
Q Consensus       592 s~~~~~~~~~~~~~~~~~-----~~~---------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  641 (708)
                      ++-++.+.+......+..     ...         .....     .-+..+++++.++.. .|.++.+.
T Consensus       217 ~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~  284 (360)
T cd05627         217 CDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGS  284 (360)
T ss_pred             ceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCC
Confidence            544443333333221111     100         00000     124567778888765 77777764


No 488
>KOG0695|consensus
Probab=99.88  E-value=2.2e-23  Score=212.92  Aligned_cols=124  Identities=36%  Similarity=0.659  Sum_probs=117.0

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      +.+.+|.+|.|+..|+++..+++|.||+.||||..+++++..++|+.|++|..+|+.||.|||++|||+||||.+|+|+|
T Consensus       306 ~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlld  385 (593)
T KOG0695|consen  306 QASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLD  385 (593)
T ss_pred             hccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEc
Confidence            55789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccc-cCCCCcccccccCCcccccccccCCCCcc
Q psy2648         547 SEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGGAPVT  590 (708)
Q Consensus       547 ~~~~vKl~DFGla~~-~~~~~~~~~~~Gt~~Y~APEvl~g~~~~~  590 (708)
                      ..|++||+|+|+++. +.++....++||||.|+|||+++|..+-.
T Consensus       386 aeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygf  430 (593)
T KOG0695|consen  386 AEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGF  430 (593)
T ss_pred             cCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCc
Confidence            999999999999986 46788889999999999999999887433


No 489
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.88  E-value=1.8e-22  Score=217.66  Aligned_cols=120  Identities=37%  Similarity=0.606  Sum_probs=108.3

Q ss_pred             ccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCC
Q psy2648         470 GGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM  549 (708)
Q Consensus       470 ~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~  549 (708)
                      .|++|++++++|+.+..+|||||||++|+|.+++..++.+++.+++.++.||+.||.|||++||+||||||+|||++.++
T Consensus        63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~  142 (332)
T cd05614          63 QSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG  142 (332)
T ss_pred             CCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC
Confidence            68999999999999999999999999999999998888899999999999999999999999999999999999999999


Q ss_pred             CEEEeeccCccccCCC--CcccccccCCcccccccccCCCCc
Q psy2648         550 NIKIADFGFSNEFTPG--NKLDTFCGSPPYAAPELFQGGAPV  589 (708)
Q Consensus       550 ~vKl~DFGla~~~~~~--~~~~~~~Gt~~Y~APEvl~g~~~~  589 (708)
                      .+||+|||+++.....  ......+||+.|||||++.+...+
T Consensus       143 ~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  184 (332)
T cd05614         143 HVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGH  184 (332)
T ss_pred             CEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCC
Confidence            9999999999865332  233457899999999999875433


No 490
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.88  E-value=1.2e-22  Score=219.22  Aligned_cols=174  Identities=27%  Similarity=0.419  Sum_probs=137.3

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+|||++++++.+++.+|+|||||++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        73 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~  152 (329)
T PTZ00263         73 MELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLD  152 (329)
T ss_pred             HhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEC
Confidence            34689999999999999999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccCCCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCC-----CCcccc-------c
Q psy2648         547 SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISP-----APTNFK-------R  614 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~-----~~~~~~-------~  614 (708)
                      .++.+||+|||+++.....  ....+||+.|+|||++.+......++-++.+.+......+     ......       .
T Consensus       153 ~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~  230 (329)
T PTZ00263        153 NKGHVKVTDFGFAKKVPDR--TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG  230 (329)
T ss_pred             CCCCEEEeeccCceEcCCC--cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC
Confidence            9999999999999866432  2356899999999999877655445444433322222111     111000       0


Q ss_pred             c---ccccccchhhhHHHHhhCCCCCCCCCC
Q psy2648         615 Q---NTIDSASIKENTARLNAGRPAKNTASI  642 (708)
Q Consensus       615 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  642 (708)
                      .   ...-+..+++++.+++...|.+|.++.
T Consensus       231 ~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~  261 (329)
T PTZ00263        231 RLKFPNWFDGRARDLVKGLLQTDHTKRLGTL  261 (329)
T ss_pred             CcCCCCCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence            0   111245678999999999999998753


No 491
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.88  E-value=1.4e-22  Score=222.65  Aligned_cols=119  Identities=33%  Similarity=0.564  Sum_probs=106.4

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+||++++++++++..+|+|||||++|+|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        98 ~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~  176 (371)
T cd05622          98 AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD  176 (371)
T ss_pred             HhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC
Confidence            3468999999999999999999999999999999988654 689999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccCCCC--cccccccCCcccccccccCC
Q psy2648         547 SEMNIKIADFGFSNEFTPGN--KLDTFCGSPPYAAPELFQGG  586 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~~~~--~~~~~~Gt~~Y~APEvl~g~  586 (708)
                      .++.+||+|||+++......  .....+||+.|||||++.+.
T Consensus       177 ~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~  218 (371)
T cd05622         177 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ  218 (371)
T ss_pred             CCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhcc
Confidence            99999999999998764332  23467899999999999754


No 492
>KOG4721|consensus
Probab=99.88  E-value=4e-23  Score=223.04  Aligned_cols=151  Identities=23%  Similarity=0.360  Sum_probs=126.0

Q ss_pred             CCCCCCCCcCCCccccccccc----cccccCcccccccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCH
Q psy2648         436 GGGGGGGAAQSPSHRGVHRSI----SASNAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE  511 (708)
Q Consensus       436 ~ggg~~g~v~s~~hr~~~R~i----~~~~~~~~~~~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e  511 (708)
                      .|.|+.|+|+...-++..-.+    ...+..-+-..-..|+|||++.+|+.....++||||||..|-|...|+....+..
T Consensus       132 lGSGaQGAVF~Grl~netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp  211 (904)
T KOG4721|consen  132 LGSGAQGAVFLGRLHNETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITP  211 (904)
T ss_pred             hccCcccceeeeeccCceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCH
Confidence            456667777766544432221    1111112222346899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCCCEEEeeccCccccCCCCcccccccCCcccccccccCC
Q psy2648         512 KEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGG  586 (708)
Q Consensus       512 ~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~  586 (708)
                      .....|..+|+.|++|||.+.|||||||..||||..+..|||+|||-++....-....+|+||..|||||+|...
T Consensus       212 ~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrne  286 (904)
T KOG4721|consen  212 SLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNE  286 (904)
T ss_pred             HHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcC
Confidence            999999999999999999999999999999999999999999999999988766667789999999999998654


No 493
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.87  E-value=1.6e-22  Score=217.70  Aligned_cols=119  Identities=39%  Similarity=0.605  Sum_probs=107.2

Q ss_pred             ccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCC
Q psy2648         470 GGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM  549 (708)
Q Consensus       470 ~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~  549 (708)
                      .+++|+++++++++.+.+|||||||++|+|.+++...+.+++.++..++.||+.||.|||++||+||||||+|||++.++
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~  138 (323)
T cd05615          59 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG  138 (323)
T ss_pred             CCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence            56788999999999999999999999999999999888999999999999999999999999999999999999999999


Q ss_pred             CEEEeeccCccccCC-CCcccccccCCcccccccccCCCC
Q psy2648         550 NIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPELFQGGAP  588 (708)
Q Consensus       550 ~vKl~DFGla~~~~~-~~~~~~~~Gt~~Y~APEvl~g~~~  588 (708)
                      .+||+|||+++.... .......+||+.|||||++.+...
T Consensus       139 ~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  178 (323)
T cd05615         139 HIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPY  178 (323)
T ss_pred             CEEEeccccccccCCCCccccCccCCccccCHHHHcCCCC
Confidence            999999999876432 223456789999999999976553


No 494
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.87  E-value=2.3e-22  Score=216.27  Aligned_cols=119  Identities=39%  Similarity=0.597  Sum_probs=106.4

Q ss_pred             ccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCCC
Q psy2648         470 GGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM  549 (708)
Q Consensus       470 ~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~~  549 (708)
                      .+++|++++++|.+.+.+|||||||++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~  138 (324)
T cd05587          59 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG  138 (324)
T ss_pred             CCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCC
Confidence            44569999999999999999999999999999998888999999999999999999999999999999999999999999


Q ss_pred             CEEEeeccCccccC-CCCcccccccCCcccccccccCCCC
Q psy2648         550 NIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGGAP  588 (708)
Q Consensus       550 ~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~APEvl~g~~~  588 (708)
                      .+||+|||+++... ........+||+.|+|||++.+...
T Consensus       139 ~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  178 (324)
T cd05587         139 HIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPY  178 (324)
T ss_pred             CEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCC
Confidence            99999999987532 2333456789999999999987653


No 495
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.87  E-value=2e-22  Score=216.41  Aligned_cols=124  Identities=36%  Similarity=0.566  Sum_probs=110.1

Q ss_pred             cccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeecCC
Q psy2648         469 SGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE  548 (708)
Q Consensus       469 ~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~  548 (708)
                      ..|++|+++++++++.+.+|||||||++|+|..++.....+++.++..++.||+.||.|||+++|+||||||+|||++.+
T Consensus        53 ~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~  132 (316)
T cd05619          53 WEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTD  132 (316)
T ss_pred             cCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC
Confidence            58999999999999999999999999999999999888889999999999999999999999999999999999999999


Q ss_pred             CCEEEeeccCccccC-CCCcccccccCCcccccccccCCCCccCC
Q psy2648         549 MNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGGAPVTSS  592 (708)
Q Consensus       549 ~~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s  592 (708)
                      +.+||+|||+++... ........+||+.|||||++.+......+
T Consensus       133 ~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  177 (316)
T cd05619         133 GHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSV  177 (316)
T ss_pred             CCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchh
Confidence            999999999987532 22334567899999999999866544433


No 496
>KOG0662|consensus
Probab=99.87  E-value=4.7e-23  Score=194.86  Aligned_cols=125  Identities=25%  Similarity=0.486  Sum_probs=110.9

Q ss_pred             ccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         468 SSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       468 ~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ...|.|||+|+++.+.+..+-||+|||.. +|..+... +|.++.+.++.++.|++.||.+||+++++||||||+|+|++
T Consensus        57 elkhknivrl~dvlhsdkkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin  135 (292)
T KOG0662|consen   57 ELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLIN  135 (292)
T ss_pred             HhhhcceeehhhhhccCceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEec
Confidence            45789999999999999999999999975 77776653 56799999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccCCC-CcccccccCCcccccccccCCCCccCCC
Q psy2648         547 SEMNIKIADFGFSNEFTPG-NKLDTFCGSPPYAAPELFQGGAPVTSSG  593 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~~~-~~~~~~~Gt~~Y~APEvl~g~~~~~~s~  593 (708)
                      .+|.+|++|||+|+.+.-. ......+.|.+|.+|.++.|.+-|++|.
T Consensus       136 ~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsi  183 (292)
T KOG0662|consen  136 RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSI  183 (292)
T ss_pred             cCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccch
Confidence            9999999999999976433 2345567899999999999999888883


No 497
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.87  E-value=3e-22  Score=215.43  Aligned_cols=177  Identities=28%  Similarity=0.377  Sum_probs=137.2

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+||++++++|+++..+||||||+++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus        55 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~  134 (323)
T cd05584          55 EAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLD  134 (323)
T ss_pred             HhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC
Confidence            45689999999999999999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccC-CCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCC-----CCCCccc-------c
Q psy2648         547 SEMNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSI-----SPAPTNF-------K  613 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~-~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~-----~~~~~~~-------~  613 (708)
                      .++.+||+|||+++... ........+||+.|+|||++.+......++-++.+.+.....     .......       .
T Consensus       135 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~  214 (323)
T cd05584         135 AQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILK  214 (323)
T ss_pred             CCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            99999999999987543 233344568999999999998765444444444333322221     1111100       0


Q ss_pred             c---cccccccchhhhHHHHhhCCCCCCCCCCC
Q psy2648         614 R---QNTIDSASIKENTARLNAGRPAKNTASIA  643 (708)
Q Consensus       614 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  643 (708)
                      .   ....-+..+.+++.+++.-.|.+|.++..
T Consensus       215 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  247 (323)
T cd05584         215 GKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGP  247 (323)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCC
Confidence            0   01122556789999999999999975443


No 498
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.87  E-value=3.3e-22  Score=226.91  Aligned_cols=124  Identities=35%  Similarity=0.592  Sum_probs=108.8

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCC
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVL----HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN  542 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~N  542 (708)
                      ....|+|||+++++|++++.+|||||||++|+|.+++..    ...+++.++..++.||+.||.|||+++||||||||+|
T Consensus       120 ~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~N  199 (478)
T PTZ00267        120 AACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSAN  199 (478)
T ss_pred             HhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHh
Confidence            457899999999999999999999999999999987753    3468999999999999999999999999999999999


Q ss_pred             eeecCCCCEEEeeccCccccCCCC---cccccccCCcccccccccCCCCcc
Q psy2648         543 LLLDSEMNIKIADFGFSNEFTPGN---KLDTFCGSPPYAAPELFQGGAPVT  590 (708)
Q Consensus       543 ILl~~~~~vKl~DFGla~~~~~~~---~~~~~~Gt~~Y~APEvl~g~~~~~  590 (708)
                      ||++.++.+||+|||+++......   .....+||+.|||||++.+.....
T Consensus       200 Ill~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  250 (478)
T PTZ00267        200 IFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSK  250 (478)
T ss_pred             EEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCc
Confidence            999999999999999998764332   234578999999999997665433


No 499
>PRK10345 hypothetical protein; Provisional
Probab=99.87  E-value=1.1e-21  Score=197.84  Aligned_cols=135  Identities=21%  Similarity=0.344  Sum_probs=109.5

Q ss_pred             EeEEcccCceEEEEEEEcCCCcEEEEEEeccCCCChhhHHHHHHHHHHHHhC-----CCCCeeeEEEEEEeCC---EEE-
Q psy2648          51 LKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-----DHPNIVKLFQVIETEK---TLY-  121 (708)
Q Consensus        51 ~~~LG~G~fg~V~la~~~~tg~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~l~~~~~~~~---~~y-  121 (708)
                      .+.||+|+||.||.  |..++.. +||++.....  ...+.+.+|+++++.+     +||||+++|++++++.   .+| 
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            46899999999995  7777776 6999876432  2345688999999999     6799999999999974   434 


Q ss_pred             EEEec--cCCCChHHHHHHcCCCCHHHHHHHHHHHHHHH-HHHHHCCceecCCCCCCEEEcCC----CcEEEEeccCcc
Q psy2648         122 LVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV-QYCHQKKIIHRDLKAENLLLDSE----MNIKIADFGFSN  193 (708)
Q Consensus       122 lVmEy--~~gg~L~~~i~~~~~l~e~~~~~i~~QI~~aL-~yLH~~gIvHRDLKPeNILld~~----~~iKL~DFGls~  193 (708)
                      +||||  +.+|+|.+++.. +.+++.  ..++.|++.++ +|||+++|+||||||+|||++..    ..++|+||+.++
T Consensus        82 ~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~  157 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES  157 (210)
T ss_pred             EEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence            89999  568999999965 456666  35688888888 99999999999999999999743    379999955443


No 500
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.87  E-value=9.6e-23  Score=215.82  Aligned_cols=142  Identities=35%  Similarity=0.601  Sum_probs=121.4

Q ss_pred             cccccCceeEEEEEEEeCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeec
Q psy2648         467 ASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD  546 (708)
Q Consensus       467 ~~~~~~~Iv~L~~~~~~~~~~yLVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  546 (708)
                      ....|+||+++++++.+...+|+||||+++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus        56 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~  135 (291)
T cd05612          56 KEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD  135 (291)
T ss_pred             HhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC
Confidence            44579999999999999999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             CCCCEEEeeccCccccCCCCcccccccCCcccccccccCCCCccCCCCCCCCCcccCCCCCCCccccccccccccchhhh
Q psy2648         547 SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASIKEN  626 (708)
Q Consensus       547 ~~~~vKl~DFGla~~~~~~~~~~~~~Gt~~Y~APEvl~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  626 (708)
                      .++.+||+|||+++.....  ....+||+.|+|||++.+......                          .|-|+++++
T Consensus       136 ~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~--------------------------~DiwSlG~i  187 (291)
T cd05612         136 KEGHIKLTDFGFAKKLRDR--TWTLCGTPEYLAPEVIQSKGHNKA--------------------------VDWWALGIL  187 (291)
T ss_pred             CCCCEEEEecCcchhccCC--cccccCChhhcCHHHHcCCCCCch--------------------------hhHHHHHHH
Confidence            9999999999999865432  235689999999999876543221                          455666667


Q ss_pred             HHHHhhCCCC
Q psy2648         627 TARLNAGRPA  636 (708)
Q Consensus       627 ~~~~~~~~~~  636 (708)
                      +-++..|.+.
T Consensus       188 l~~l~~g~~p  197 (291)
T cd05612         188 IYEMLVGYPP  197 (291)
T ss_pred             HHHHHhCCCC
Confidence            6666666654


Done!