RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy2648
(708 letters)
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 517 bits (1334), Expect = 0.0
Identities = 238/355 (67%), Positives = 268/355 (75%), Gaps = 45/355 (12%)
Query: 35 SSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFR 94
+ ++PHIG Y+LLKTIGKGNFAKVKLA+H+ TG+EVAIKIIDKTQLNP SLQKLFR
Sbjct: 4 IASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR 63
Query: 95 EVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQI 154
EVRIMK+L+HPNIVKLF+VIETEKTLYL+MEYASGGEVFDYLV HGRMKEKEAR+KFRQI
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 123
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 214
VSAVQYCHQK+I+HRDLKAENLLLD++MNIKIADFGFSNEFT G KLD FCG+PPYAAPE
Sbjct: 124 VSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPE 183
Query: 215 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCEN 274
LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG L+ELRERVLRGKYRIPFYMSTDCEN
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 243
Query: 275 LLKKFLVLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNH----THNSSISPAPTNFKRQN 330
LLK+FLVLNP KR +LE ++ + P +
Sbjct: 244 LLKRFLVLNPIKRGTLE---QI--------------MKDRWINAGHEEDELKPFVEPELD 286
Query: 331 TIDSASIKENTARLNAGRPAKNTASIAPLDTKALVGLGYSRSEIEESLSQAKYDD 385
D I +VG+GYS+ EI+ESLS+ KYD+
Sbjct: 287 ISDQKRID------------------------IMVGMGYSQEEIQESLSKMKYDE 317
Score = 247 bits (632), Expect = 3e-76
Identities = 98/111 (88%), Positives = 107/111 (96%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+KLF+VIETEKTLYL+MEYASGGEVFDYLV HGRMKEKEAR+KFRQIVSAVQYCHQK+I+
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 136
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
HRDLKAENLLLD++MNIKIADFGFSNEFT G KLD FCG+PPYAAPELFQG
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQG 187
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 485 bits (1252), Expect = e-169
Identities = 122/255 (47%), Positives = 173/255 (67%), Gaps = 1/255 (0%)
Query: 38 RERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSL-QKLFREV 96
+ IG Y L T+G G F KVK+ +H TG +VA+KI+++ ++ + K+ RE+
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREI 62
Query: 97 RIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVS 156
+ +K+ HP+I+KL+QVI T ++VMEY SGGE+FDY+ HGR++E EAR F+QI+S
Sbjct: 63 QNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS 122
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
AV YCH+ ++HRDLK EN+LLD+ MN KIADFG SN + G L T CGSP YAAPE+
Sbjct: 123 AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVI 182
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
G+ Y GPEVD+WS GVILY L+ G+LPFD + L +++ G + IP Y++ LL
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLL 242
Query: 277 KKFLVLNPAKRASLE 291
L ++P KRA+++
Sbjct: 243 MHMLQVDPLKRATIK 257
Score = 234 bits (599), Expect = 4e-72
Identities = 66/111 (59%), Positives = 83/111 (74%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+KL+QVI T ++VMEY SGGE+FDY+ HGR++E EAR F+QI+SAV YCH+ ++
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVV 133
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
HRDLK EN+LLD+ MN KIADFG SN + G L T CGSP YAAPE+ G
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG 184
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 491 bits (1265), Expect = e-168
Identities = 147/513 (28%), Positives = 227/513 (44%), Gaps = 85/513 (16%)
Query: 35 SSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLF 93
++ IG Y L T+G G F KVK+ KH TG +VA+KI+++ ++ + + K+
Sbjct: 5 EKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIR 64
Query: 94 REVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQ 153
RE++ +K+ HP+I+KL+QVI T +++VMEY SGGE+FDY+ +GR+ EKE+R F+Q
Sbjct: 65 REIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQ 124
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
I+S V YCH+ ++HRDLK EN+LLD+ MN KIADFG SN + G L T CGSP YAAP
Sbjct: 125 ILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAP 184
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E+ G+ Y GPEVD+WS GVILY L+ G+LPFD + L +++ G + P Y++
Sbjct: 185 EVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVI 244
Query: 274 NLLKKFLVLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHT-----HNSSISPAPTNFKR 328
+LLK L ++P KRA+++ ++ H + P ++
Sbjct: 245 SLLKHMLQVDPMKRATIK---DI--------------REHEWFKQDLPKYLFPEDPSYSS 287
Query: 329 QNTIDSASIKENTARLNAGRPAKNTASIAPLDTKALVGLGYSRSEIEESLSQAKYDDPES 388
ID ++KE S E+ L + DP +
Sbjct: 288 TM-IDDEALKE-----------------------VCEKFECSEEEVLSCLYNRNHQDPLA 323
Query: 389 D----------GSRSGSSLSLRNLQPGSGGGATGGSGSSRSWRNMQPGSGGVATGGSGGG 438
L P S + A
Sbjct: 324 VAYHLIIDNRRIMNEAKDFYLATSPPDSFLDDHHLTRPHPERVPFLVAETPRARHTLDEL 383
Query: 439 GGGGAAQSPSHRGVHRSISASNAKPS---------------------------RRASSGG 471
+ + S ++P+ RR +
Sbjct: 384 NPQKSKHQGVRKAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVT 443
Query: 472 ETLLKL-FQVIETEKTLYLVMEYASGGEVFDYL 503
T K+ Q+ + + YL+ + E+ + L
Sbjct: 444 STFSKMSLQLYQVDSRTYLLDFRSIDDEILEVL 476
Score = 235 bits (601), Expect = 5e-70
Identities = 64/111 (57%), Positives = 83/111 (74%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+KL+QVI T +++VMEY SGGE+FDY+ +GR+ EKE+R F+QI+S V YCH+ ++
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVV 138
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
HRDLK EN+LLD+ MN KIADFG SN + G L T CGSP YAAPE+ G
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG 189
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 482 bits (1244), Expect = e-167
Identities = 119/254 (46%), Positives = 173/254 (68%), Gaps = 2/254 (0%)
Query: 39 ERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLFREVR 97
+ HIG Y + +T+G+G+F KVKLA H T ++VA+K I + L + ++ RE+
Sbjct: 2 AISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREIS 61
Query: 98 IMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSA 157
+K+L HP+I+KL+ VI T + +V+EYA GGE+FDY+V RM E E R F+QI+ A
Sbjct: 62 YLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICA 120
Query: 158 VQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 217
++YCH+ KI+HRDLK ENLLLD +N+KIADFG SN T GN L T CGSP YAAPE+
Sbjct: 121 IEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIN 180
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLK 277
GK Y GPEVDVWS G++LY ++ G LPFD + L ++V Y +P ++S ++L++
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIR 240
Query: 278 KFLVLNPAKRASLE 291
+ +V +P +R +++
Sbjct: 241 RMIVADPMQRITIQ 254
Score = 229 bits (587), Expect = 2e-69
Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+KL+ VI T + +V+EYA GGE+FDY+V RM E E R F+QI+ A++YCH+ KI+
Sbjct: 72 IKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIV 130
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
HRDLK ENLLLD +N+KIADFG SN T GN L T CGSP YAAPE+ G
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVING 181
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 476 bits (1227), Expect = e-166
Identities = 129/258 (50%), Positives = 181/258 (70%), Gaps = 2/258 (0%)
Query: 35 SSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ-KLF 93
D HIG Y+++KT+G+G+FAKVKLA H TG++VA+KII+K L +Q ++
Sbjct: 2 PKSSLADGAHIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE 61
Query: 94 REVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQ 153
RE+ +++L HP+I+KL+ VI+++ + +V+EYA G E+FDY+V +M E+EAR F+Q
Sbjct: 62 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQ 120
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
I+SAV+YCH+ KI+HRDLK ENLLLD +N+KIADFG SN T GN L T CGSP YAAP
Sbjct: 121 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 180
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCE 273
E+ GK Y GPEVDVWS GVILY ++ LPFD ++ L + + G Y +P ++S
Sbjct: 181 EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAA 240
Query: 274 NLLKKFLVLNPAKRASLE 291
L+K+ L++NP R S+
Sbjct: 241 GLIKRMLIVNPLNRISIH 258
Score = 225 bits (576), Expect = 8e-69
Identities = 65/111 (58%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+KL+ VI+++ + +V+EYA G E+FDY+V +M E+EAR F+QI+SAV+YCH+ KI+
Sbjct: 76 IKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIV 134
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
HRDLK ENLLLD +N+KIADFG SN T GN L T CGSP YAAPE+ G
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 185
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 467 bits (1203), Expect = e-161
Identities = 90/269 (33%), Positives = 134/269 (49%), Gaps = 13/269 (4%)
Query: 30 SSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL----- 84
+ + + KY + +G G F V A KEV +K I K ++
Sbjct: 8 KAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCW 67
Query: 85 -NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVME-YASGGEVFDYLVLHGRM 142
L K+ E+ I+ ++H NI+K+ + E + LVME + SG ++F ++ H R+
Sbjct: 68 IEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRL 127
Query: 143 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD 202
E A FRQ+VSAV Y K IIHRD+K EN+++ + IK+ DFG + G
Sbjct: 128 DEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY 187
Query: 203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY 262
TFCG+ Y APE+ G Y GPE+++WSLGV LYTLV PF E +
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE------LEETVEAAI 241
Query: 263 RIPFYMSTDCENLLKKFLVLNPAKRASLE 291
P+ +S + +L+ L P +R +LE
Sbjct: 242 HPPYLVSKELMSLVSGLLQPVPERRTTLE 270
Score = 228 bits (584), Expect = 3e-69
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 475 LKLFQVIETEKTLYLVME-YASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+K+ + E + LVME + SG ++F ++ H R+ E A FRQ+VSAV Y K I
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDI 151
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K EN+++ + IK+ DFG + G TFCG+ Y APE+ G
Sbjct: 152 IHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMG 203
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 457 bits (1177), Expect = e-157
Identities = 91/257 (35%), Positives = 147/257 (57%), Gaps = 7/257 (2%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + + + +E+ I K
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINK 60
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 275 LLKKFLVLNPAKRASLE 291
LL K LV NP+ R ++
Sbjct: 241 LLHKILVENPSARITIP 257
Score = 227 bits (580), Expect = 1e-68
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 7/122 (5%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+K + YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQG----GA 587
HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 588 PV 589
PV
Sbjct: 188 PV 189
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 454 bits (1171), Expect = e-156
Identities = 98/270 (36%), Positives = 146/270 (54%), Gaps = 11/270 (4%)
Query: 30 SSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSL 89
+ +Y +K IG GNF +L + T + VA+K I++
Sbjct: 4 APVTTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID--- 60
Query: 90 QKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARA 149
+ + RE+ + L HPNIV+ +VI T L ++MEYASGGE+++ + GR E EAR
Sbjct: 61 ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARF 120
Query: 150 KFRQIVSAVQYCHQKKIIHRDLKAENLLLDS--EMNIKIADFGFSNEFTPGNKLDTFCGS 207
F+Q++S V YCH +I HRDLK EN LLD +KI DFG+S ++ + G+
Sbjct: 121 FFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGT 180
Query: 208 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTL----RELRERVLRGKYR 263
P Y APE+ ++YDG DVWS GV LY ++ G+ PF+ R+ +R+L KY
Sbjct: 181 PAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS 240
Query: 264 IP--FYMSTDCENLLKKFLVLNPAKRASLE 291
IP +S +C +L+ + V +PA R S+
Sbjct: 241 IPDDIRISPECCHLISRIFVADPATRISIP 270
Score = 223 bits (569), Expect = 1e-66
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
++ +VI T L ++MEYASGGE+++ + GR E EAR F+Q++S V YCH +I
Sbjct: 79 VRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQIC 138
Query: 535 HRDLKAENLLLDS--EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
HRDLK EN LLD +KI DFG+S ++ + G+P Y APE+
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLR 191
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 451 bits (1163), Expect = e-156
Identities = 91/257 (35%), Positives = 147/257 (57%), Gaps = 7/257 (2%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
P + + L++T+G+G + +V+LA + T + VA+KI+D + + + +E+ I K
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINK 60
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
ML+H N+VK + YL +EY SGGE+FD + M E +A+ F Q+++ V Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQ 217
H I HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFD--GSTLRELRERVLRGKYRIPF-YMSTDCEN 274
+++ VDVWS G++L +++G LP+D + +E + + Y P+ + +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 275 LLKKFLVLNPAKRASLE 291
LL K LV NP+ R ++
Sbjct: 241 LLHKILVENPSARITIP 257
Score = 224 bits (574), Expect = 2e-68
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 7/122 (5%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+K + YL +EY SGGE+FD + M E +A+ F Q+++ V Y H I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK---LDTFCGSPPYAAPELFQG----GA 587
HRD+K ENLLLD N+KI+DFG + F N+ L+ CG+ PY APEL +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 588 PV 589
PV
Sbjct: 188 PV 189
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 444 bits (1143), Expect = e-152
Identities = 78/272 (28%), Positives = 131/272 (48%), Gaps = 17/272 (6%)
Query: 30 SSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGS- 88
+ + E +Y+L +GKG F V + +VAIK+I + ++ S
Sbjct: 15 GTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSP 74
Query: 89 ---LQKLFREVRIMKMLD----HPNIVKLFQVIETEKTLYLVMEYA-SGGEVFDYLVLHG 140
EV ++ + HP +++L ET++ LV+E ++FDY+ G
Sbjct: 75 LSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG 134
Query: 141 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGN 199
+ E +R F Q+V+A+Q+CH + ++HRD+K EN+L+D K+ DFG
Sbjct: 135 PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGA-LLHDE 193
Query: 200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
F G+ Y+ PE +Y VWSLG++LY +V G +PF+ + +L
Sbjct: 194 PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER------DQEILE 247
Query: 260 GKYRIPFYMSTDCENLLKKFLVLNPAKRASLE 291
+ P ++S DC L+++ L P+ R SLE
Sbjct: 248 AELHFPAHVSPDCCALIRRCLAPKPSSRPSLE 279
Score = 216 bits (551), Expect = 1e-64
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 475 LKLFQVIETEKTLYLVMEYA-SGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++L ET++ LV+E ++FDY+ G + E +R F Q+V+A+Q+CH + +
Sbjct: 101 IRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGV 160
Query: 534 IHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG----GAP 588
+HRD+K EN+L+D K+ DFG F G+ Y+ PE P
Sbjct: 161 VHRDIKDENILIDLRRGCAKLIDFGSGA-LLHDEPYTDFDGTRVYSPPEWISRHQYHALP 219
Query: 589 VT 590
T
Sbjct: 220 AT 221
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 443 bits (1142), Expect = e-152
Identities = 74/287 (25%), Positives = 141/287 (49%), Gaps = 15/287 (5%)
Query: 13 SETGRGSENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGK 72
+G + + + + + EP +Y++ +G G F V V
Sbjct: 10 HSSGLVPRGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL 69
Query: 73 EVAIKIIDKTQLN----PGSLQKLFREVRIMKMLDH--PNIVKLFQVIETEKTLYLVMEY 126
VAIK ++K +++ + ++ EV ++K + +++L E + L++E
Sbjct: 70 PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 129
Query: 127 ASG-GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE-MNI 184
++FD++ G ++E+ AR+ F Q++ AV++CH ++HRD+K EN+L+D +
Sbjct: 130 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 189
Query: 185 KIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 244
K+ DFG F G+ Y+ PE + +Y G VWSLG++LY +V G +P
Sbjct: 190 KLIDFGSGA-LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
Query: 245 FDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRASLE 291
F+ E ++RG+ +S++C++L++ L L P+ R + E
Sbjct: 249 FEH------DEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 289
Score = 215 bits (549), Expect = 3e-64
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 475 LKLFQVIETEKTLYLVMEYASG-GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++L E + L++E ++FD++ G ++E+ AR+ F Q++ AV++CH +
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 170
Query: 534 IHRDLKAENLLLDSE-MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG----GAP 588
+HRD+K EN+L+D +K+ DFG F G+ Y+ PE + G
Sbjct: 171 LHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 229
Query: 589 VT 590
Sbjct: 230 AA 231
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 441 bits (1136), Expect = e-151
Identities = 84/257 (32%), Positives = 137/257 (53%), Gaps = 11/257 (4%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN--PGSLQKLFREVRIMKML 102
IGKY + +G+G++ KVK T A+KI+ K +L P + +E+++++ L
Sbjct: 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL 63
Query: 103 DHPNIVKLFQVI--ETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAV 158
H N+++L V+ E ++ +Y+VMEY G E+ D + R +A F Q++ +
Sbjct: 64 RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP-EKRFPVCQAHGYFCQLIDGL 122
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN---EFTPGNKLDTFCGSPPYAAPEL 215
+Y H + I+H+D+K NLLL + +KI+ G + F + T GSP + PE+
Sbjct: 123 EYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEI 182
Query: 216 FQGKK-YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCEN 274
G + G +VD+WS GV LY + +G PF+G + +L E + +G Y IP +
Sbjct: 183 ANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSD 242
Query: 275 LLKKFLVLNPAKRASLE 291
LLK L PAKR S+
Sbjct: 243 LLKGMLEYEPAKRFSIR 259
Score = 206 bits (527), Expect = 3e-61
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 475 LKLFQVI--ETEKTLYLVMEYASGG--EVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
++L V+ E ++ +Y+VMEY G E+ D + R +A F Q++ ++Y H
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHS 127
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSN---EFTPGNKLDTFCGSPPYAAPELFQG 585
+ I+H+D+K NLLL + +KI+ G + F + T GSP + PE+ G
Sbjct: 128 QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANG 185
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 420 bits (1083), Expect = e-143
Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 3/270 (1%)
Query: 24 SSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQ 83
+ +E D +Y + +GKG FAK T + A KI+ K+
Sbjct: 19 GAPAAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSL 78
Query: 84 L-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRM 142
L P +K+ E+ I + L H ++V E +++V+E + + +
Sbjct: 79 LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL 138
Query: 143 KEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKL 201
E EAR RQIV QY H+ ++IHRDLK NL L+ ++ +KI DFG + + G +
Sbjct: 139 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 198
Query: 202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGK 261
CG+P Y APE+ K + EVDVWS+G I+YTL+ G PF+ S L+E R+ + +
Sbjct: 199 KVLCGTPNYIAPEVLSKKGHS-FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE 257
Query: 262 YRIPFYMSTDCENLLKKFLVLNPAKRASLE 291
Y IP +++ +L++K L +P R ++
Sbjct: 258 YSIPKHINPVAASLIQKMLQTDPTARPTIN 287
Score = 201 bits (514), Expect = 4e-59
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+ E +++V+E + + + E EAR RQIV QY H+ ++I
Sbjct: 104 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 163
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
HRDLK NL L+ ++ +KI DFG + + G + CG+P Y APE+
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK 215
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 418 bits (1076), Expect = e-142
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 3/261 (1%)
Query: 33 RESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQK 91
+E D +Y + +GKG FAK T + A KI+ K+ L P +K
Sbjct: 2 KEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK 61
Query: 92 LFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF 151
+ E+ I + L H ++V E +++V+E + + + E EAR
Sbjct: 62 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL 121
Query: 152 RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPY 210
RQIV QY H+ ++IHRDLK NL L+ ++ +KI DFG + + G + CG+P Y
Sbjct: 122 RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY 181
Query: 211 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMST 270
APE+ K + EVDVWS+G I+YTL+ G PF+ S L+E R+ + +Y IP +++
Sbjct: 182 IAPEVLSKKGHS-FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINP 240
Query: 271 DCENLLKKFLVLNPAKRASLE 291
+L++K L +P R ++
Sbjct: 241 VAASLIQKMLQTDPTARPTIN 261
Score = 202 bits (516), Expect = 7e-60
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+ E +++V+E + + + E EAR RQIV QY H+ ++I
Sbjct: 78 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 137
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
HRDLK NL L+ ++ +KI DFG + + G + CG+P Y APE+
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK 189
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 413 bits (1064), Expect = e-141
Identities = 91/288 (31%), Positives = 144/288 (50%), Gaps = 32/288 (11%)
Query: 35 SSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL---------- 84
SS D + +Y L IGKG++ VKLA + A+K++ K +L
Sbjct: 2 SSGSSGDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRP 61
Query: 85 --------------NPGSLQKLFREVRIMKMLDHPNIVKLFQVIE--TEKTLYLVMEYAS 128
G ++++++E+ I+K LDHPN+VKL +V++ E LY+V E +
Sbjct: 62 PPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVN 121
Query: 129 GGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIAD 188
G V + + E +AR F+ ++ ++Y H +KIIHRD+K NLL+ + +IKIAD
Sbjct: 122 QGPVMEV-PTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIAD 180
Query: 189 FGFSNEFTPGNK-LDTFCGSPPYAAPELFQG--KKYDGPEVDVWSLGVILYTLVSGSLPF 245
FG SNEF + L G+P + APE K + G +DVW++GV LY V G PF
Sbjct: 181 FGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
Query: 246 DGSTLRELRERVLRGKYRIPFY--MSTDCENLLKKFLVLNPAKRASLE 291
+ L ++ P ++ D ++L+ + L NP R +
Sbjct: 241 MDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVP 288
Score = 200 bits (512), Expect = 3e-59
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Query: 474 LLKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++KL +V++ E LY+V E + G V + + E +AR F+ ++ ++Y H +
Sbjct: 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-PTLKPLSEDQARFYFQDLIKGIEYLHYQ 156
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQGG 586
KIIHRD+K NLL+ + +IKIADFG SNEF + L G+P + APE
Sbjct: 157 KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSET 212
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 399 bits (1029), Expect = e-136
Identities = 101/251 (40%), Positives = 144/251 (57%), Gaps = 4/251 (1%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKML 102
I +K+ +GKG+FA V A+ + TG EVAIK+IDK + G +Q++ EV+I L
Sbjct: 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL 68
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYC 161
HP+I++L+ E +YLV+E GE+ YL E EAR QI++ + Y
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKK 220
H I+HRDL NLLL MNIKIADFG + + P K T CG+P Y +PE+
Sbjct: 129 HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA 188
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFL 280
+ G E DVWSLG + YTL+ G PFD T++ +V+ Y +P ++S + ++L+ + L
Sbjct: 189 H-GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLL 247
Query: 281 VLNPAKRASLE 291
NPA R SL
Sbjct: 248 RRNPADRLSLS 258
Score = 192 bits (491), Expect = 2e-56
Identities = 46/113 (40%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKI 533
L+L+ E +YLV+E GE+ YL E EAR QI++ + Y H I
Sbjct: 74 LELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGI 133
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
+HRDL NLLL MNIKIADFG + + P K T CG+P Y +PE+
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATR 186
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 393 bits (1013), Expect = e-133
Identities = 85/257 (33%), Positives = 145/257 (56%), Gaps = 3/257 (1%)
Query: 36 SRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK-LFR 94
+ + + I + + + +GKG F V LA+ +A+K++ K+QL ++ L R
Sbjct: 4 AEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 95 EVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQI 154
E+ I L HPNI++++ K +YL++E+A GE++ L HGR E+ + ++
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 214
A+ YCH++K+IHRD+K ENLL+ + +KIADFG+S P + T CG+ Y PE
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVH-APSLRRRTMCGTLDYLPPE 182
Query: 215 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCEN 274
+ +GK +D +VD+W GV+ Y + G PFD + E R++ + P ++S ++
Sbjct: 183 MIEGKTHD-EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKD 241
Query: 275 LLKKFLVLNPAKRASLE 291
L+ K L +P +R L+
Sbjct: 242 LISKLLRYHPPQRLPLK 258
Score = 193 bits (493), Expect = 1e-56
Identities = 42/112 (37%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+++ K +YL++E+A GE++ L HGR E+ + ++ A+ YCH++K+
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLL+ + +KIADFG+S P + T CG+ Y PE+ +G
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVH-APSLRRRTMCGTLDYLPPEMIEG 186
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 388 bits (999), Expect = e-130
Identities = 67/321 (20%), Positives = 128/321 (39%), Gaps = 48/321 (14%)
Query: 16 GRGSENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVA 75
G S + + + + +I Y++++T+ +G F K+ L + K A
Sbjct: 1 GPLGSMKDILSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYA 58
Query: 76 IKIIDKTQL---------------NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTL 120
+K +K+ L E++I+ + + + +I +
Sbjct: 59 LKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEV 118
Query: 121 YLVMEYASGGEVFDYLVLHGRMK--------EKEARAKFRQIVSAVQYCH-QKKIIHRDL 171
Y++ EY + + + + + + ++++ Y H +K I HRD+
Sbjct: 119 YIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDV 178
Query: 172 KAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK-YDGPEVDVWS 230
K N+L+D +K++DFG S K+ G+ + PE F + Y+G +VD+WS
Sbjct: 179 KPSNILMDKNGRVKLSDFGESEYM-VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWS 237
Query: 231 LGVILYTLVSGSLPFDG-STLRELRERVLRGKYRIPF-------------------YMST 270
LG+ LY + +PF +L EL + P ++S
Sbjct: 238 LGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSN 297
Query: 271 DCENLLKKFLVLNPAKRASLE 291
+ + LK FL NPA+R + E
Sbjct: 298 EDIDFLKLFLRKNPAERITSE 318
Score = 194 bits (496), Expect = 2e-56
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMK--------EKEARAKFRQIVSAV 525
L +I +Y++ EY + + + + + + ++++
Sbjct: 105 CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSF 164
Query: 526 QYCH-QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
Y H +K I HRD+K N+L+D +K++DFG S K+ G+ + PE F
Sbjct: 165 SYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM-VDKKIKGSRGTYEFMPPEFFS 223
Query: 585 G 585
Sbjct: 224 N 224
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 379 bits (976), Expect = e-128
Identities = 85/254 (33%), Positives = 146/254 (57%), Gaps = 3/254 (1%)
Query: 39 ERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSL-QKLFREVR 97
++ + + +++ + +GKG F V LA+ + +A+K++ K QL + +L REV
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 98 IMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSA 157
I L HPNI++L+ +YL++EYA G V+ L + E+ ++ +A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 158 VQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 217
+ YCH K++IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIE 180
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLK 277
G+ +D +VD+WSLGV+ Y + G PF+ +T +E +R+ R ++ P +++ +L+
Sbjct: 181 GRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 239
Query: 278 KFLVLNPAKRASLE 291
+ L NP++R L
Sbjct: 240 RLLKHNPSQRPMLR 253
Score = 186 bits (475), Expect = 4e-54
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
+L+L+ +YL++EYA G V+ L + E+ ++ +A+ YCH K++
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
IHRD+K ENLLL S +KIADFG+S P ++ CG+ Y PE+ +G
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEG 181
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 383 bits (984), Expect = e-124
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 37 RRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREV 96
G +++ + +G G F V H TG++VAIK + +L+P + ++ E+
Sbjct: 5 SPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQ-ELSPKNRERWCLEI 63
Query: 97 RIMKMLDHPNIVKLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGR---MKEKEA 147
+IMK L+HPN+V +V + + L L MEY GG++ YL +KE
Sbjct: 64 QIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 123
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNKLDTF 204
R I SA++Y H+ +IIHRDLK EN++L + KI D G++ E G F
Sbjct: 124 RTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF 183
Query: 205 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRI 264
G+ Y APEL + KKY VD WS G + + ++G PF + +R K
Sbjct: 184 VGTLQYLAPELLEQKKYT-VTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNE 242
Query: 265 PFYMSTDC------------------------ENLLKKFLVLNPAKRASLE 291
+ D E L+ L+ + +R +
Sbjct: 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDP 293
Score = 200 bits (509), Expect = 2e-55
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 476 KLFQVIETEKTL------YLVMEYASGGEVFDYLVLHGR---MKEKEARAKFRQIVSAVQ 526
+V + + L L MEY GG++ YL +KE R I SA++
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 527 YCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 583
Y H+ +IIHRDLK EN++L + KI D G++ E G F G+ Y APEL
Sbjct: 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL 195
Query: 584 QG 585
+
Sbjct: 196 EQ 197
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 355 bits (914), Expect = e-118
Identities = 67/289 (23%), Positives = 116/289 (40%), Gaps = 46/289 (15%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
+ L +G+G A V +H TG AIK+ + + RE ++K L+H NI
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNI 69
Query: 108 VKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGR---MKEKEARAKFRQIVSAVQYCH 162
VKLF + E T + L+ME+ G ++ L + E E R +V + +
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 163 QKKIIHRDLKAENLLL----DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 218
+ I+HR++K N++ D + K+ DFG + E + + G+ Y P++++
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYER 189
Query: 219 K-------KYDGPEVDVWSLGVILYTLVSGSLPFD----GSTLRELRERVLRGKY----- 262
K G VD+WS+GV Y +GSLPF +E+ +++ GK
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249
Query: 263 --------------------RIPFYMSTDCENLLKKFLVLNPAKRASLE 291
+ + +L L + K +
Sbjct: 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD 298
Score = 194 bits (494), Expect = 2e-56
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
Query: 476 KLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGR---MKEKEARAKFRQIVSAVQYCHQ 530
KLF + E T + L+ME+ G ++ L + E E R +V + + +
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 531 KKIIHRDLKAENLLL----DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGG 586
I+HR++K N++ D + K+ DFG + E + + G+ Y P++++
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERA 190
Query: 587 APVTSSG 593
Sbjct: 191 VLRKDHQ 197
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 358 bits (919), Expect = e-118
Identities = 67/289 (23%), Positives = 116/289 (40%), Gaps = 46/289 (15%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
+ L +G+G A V +H TG AIK+ + + RE ++K L+H NI
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNI 69
Query: 108 VKLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGR---MKEKEARAKFRQIVSAVQYCH 162
VKLF + E T + L+ME+ G ++ L + E E R +V + +
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 163 QKKIIHRDLKAENLLL----DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 218
+ I+HR++K N++ D + K+ DFG + E + + G+ Y P++++
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYER 189
Query: 219 K-------KYDGPEVDVWSLGVILYTLVSGSLPFD----GSTLRELRERVLRGKY----- 262
K G VD+WS+GV Y +GSLPF +E+ +++ GK
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249
Query: 263 --------------------RIPFYMSTDCENLLKKFLVLNPAKRASLE 291
+ + +L L + K +
Sbjct: 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD 298
Score = 195 bits (496), Expect = 7e-56
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
Query: 476 KLFQVIE--TEKTLYLVMEYASGGEVFDYLVLHGR---MKEKEARAKFRQIVSAVQYCHQ 530
KLF + E T + L+ME+ G ++ L + E E R +V + + +
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 531 KKIIHRDLKAENLLL----DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGG 586
I+HR++K N++ D + K+ DFG + E + + G+ Y P++++
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERA 190
Query: 587 APVTSSG 593
Sbjct: 191 VLRKDHQ 197
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 343 bits (882), Expect = e-113
Identities = 102/261 (39%), Positives = 144/261 (55%), Gaps = 17/261 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGS------LQKLFREVRIMK 100
+Y + KT+G G +VKLA T K+VAIKII K + GS + E+ I+K
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
L+HP I+K+ + E Y+V+E GGE+FD +V + R+KE + F Q++ AVQY
Sbjct: 71 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 161 CHQKKIIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 217
H+ IIHRDLK EN+LL S + IKI DFG S + + T CG+P Y APE+
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 218 GKKYD--GPEVDVWSLGVILYTLVSGSLPF-DGSTLRELRERVLRGKYRIP----FYMST 270
VD WSLGVIL+ +SG PF + T L++++ GKY +S
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 271 DCENLLKKFLVLNPAKRASLE 291
+L+KK LV++P R + E
Sbjct: 250 KALDLVKKLLVVDPKARFTTE 270
Score = 178 bits (453), Expect = 2e-50
Identities = 48/114 (42%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+K+ + E Y+V+E GGE+FD +V + R+KE + F Q++ AVQY H+ II
Sbjct: 78 IKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 136
Query: 535 HRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
HRDLK EN+LL S + IKI DFG S + + T CG+P Y APE+
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 190
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 344 bits (884), Expect = e-112
Identities = 72/301 (23%), Positives = 128/301 (42%), Gaps = 21/301 (6%)
Query: 9 STGKSETGRGSENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHV 68
T ++ R ++ + SS E Y +LK IG G +KV +
Sbjct: 19 ETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLN- 77
Query: 69 PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN--IVKLFQVIETEKTLYLVMEY 126
+ AIK ++ + + +L E+ + L + I++L+ T++ +Y+VME
Sbjct: 78 EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC 137
Query: 127 ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKI 186
++ +L + E ++ ++ ++ AV HQ I+H DLK N L+ + +K+
Sbjct: 138 G-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKL 195
Query: 187 ADFGFSNEF---TPGNKLDTFCGSPPYAAPELFQGKKYD----------GPEVDVWSLGV 233
DFG +N+ T D+ G+ Y PE + P+ DVWSLG
Sbjct: 196 IDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 255
Query: 234 ILYTLVSGSLPFDGSTLR-ELRERVLRGKYRIPF--YMSTDCENLLKKFLVLNPAKRASL 290
ILY + G PF + ++ + I F D +++LK L +P +R S+
Sbjct: 256 ILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 315
Query: 291 E 291
Sbjct: 316 P 316
Score = 174 bits (443), Expect = 2e-48
Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
+L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ I+H
Sbjct: 120 RLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 178
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEF---TPGNKLDTFCGSPPYAAPELFQGGAPVTSS 592
DLK N L+ + +K+ DFG +N+ T D+ G+ Y PE + + +
Sbjct: 179 SDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSREN 237
Query: 593 GGAGTNHTHNSSI 605
G + + + S +
Sbjct: 238 GKSKSKISPKSDV 250
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 338 bits (868), Expect = e-112
Identities = 89/252 (35%), Positives = 141/252 (55%), Gaps = 11/252 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
Y L TIG+G++ +VK+A T A K I K + + + +E+ IMK LDHPN
Sbjct: 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDHPN 67
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I++L++ E +YLVME +GGE+F+ +V +E +A + ++SAV YCH+ +
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 127
Query: 167 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
HRDLK EN L + + +K+ DFG + F PG + T G+P Y +P++ +G Y G
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG-LY-G 185
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKKF 279
PE D WS GV++Y L+ G PF T E+ ++ G + P +S E+L+++
Sbjct: 186 PECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRL 245
Query: 280 LVLNPAKRASLE 291
L +P +R +
Sbjct: 246 LTKSPKQRITSL 257
Score = 174 bits (444), Expect = 7e-50
Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
+L++ E +YLVME +GGE+F+ +V +E +A + ++SAV YCH+ + H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 129
Query: 536 RDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGG 586
RDLK EN L + + +K+ DFG + F PG + T G+P Y +P++ +G
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL 183
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 336 bits (865), Expect = e-111
Identities = 92/250 (36%), Positives = 136/250 (54%), Gaps = 8/250 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
Y + + +GKG F+ V+ H TG E A KII+ +L+ QKL RE RI + L HPN
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV+L I+ E YLV + +GGE+F+ +V E +A +QI+ ++ YCH I
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 167 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+HR+LK ENLLL S+ +K+ADFG + E F G+P Y +PE+ + Y
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY-S 185
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKKF 279
VD+W+ GVILY L+ G PF L ++ G Y P ++ + ++L+
Sbjct: 186 KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSM 245
Query: 280 LVLNPAKRAS 289
L +NP KR +
Sbjct: 246 LTVNPKKRIT 255
Score = 167 bits (425), Expect = 5e-47
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
++L I+ E YLV + +GGE+F+ +V E +A +QI+ ++ YCH I+
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV 127
Query: 535 HRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
HR+LK ENLLL S+ +K+ADFG + E F G+P Y +PE+ +
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 181
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 334 bits (860), Expect = e-110
Identities = 77/255 (30%), Positives = 133/255 (52%), Gaps = 13/255 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+ + +G G F V L + +G E IK I+K + ++++ E+ ++K LDHPN
Sbjct: 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPN 81
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQYCH 162
I+K+F+V E +Y+VME GGE+ + +V + E +Q+++A+ Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 163 QKKIIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
+ ++H+DLK EN+L IKI DFG + F G+ Y APE+F+
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR- 200
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---RIPFYMSTDCENLL 276
+ D+WS GV++Y L++G LPF G++L E++++ + ++ +LL
Sbjct: 201 DV-TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLL 259
Query: 277 KKFLVLNPAKRASLE 291
K+ L +P +R S
Sbjct: 260 KQMLTKDPERRPSAA 274
Score = 170 bits (432), Expect = 4e-48
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFDYLV----LHGRMKEKEARAKFRQIVSAVQYCHQK 531
K+F+V E +Y+VME GGE+ + +V + E +Q+++A+ Y H +
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 532 KIIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGG 586
++H+DLK EN+L IKI DFG + F G+ Y APE+F+
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRD 201
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 333 bits (855), Expect = e-109
Identities = 69/290 (23%), Positives = 125/290 (43%), Gaps = 21/290 (7%)
Query: 20 ENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII 79
++ S + E+ + Y +LK IG G +KV + + AIK +
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYV 60
Query: 80 DKTQLNPGSLQKLFREVRIMKMLDHPN--IVKLFQVIETEKTLYLVMEYASGGEVFDYLV 137
+ + + +L E+ + L + I++L+ T++ +Y+VME ++ +L
Sbjct: 61 NLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLK 119
Query: 138 LHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-- 195
+ E ++ ++ ++ AV HQ I+H DLK N L+ + +K+ DFG +N+
Sbjct: 120 KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 178
Query: 196 -TPGNKLDTFCGSPPYAAPELFQGKKYD----------GPEVDVWSLGVILYTLVSGSLP 244
T D+ G+ Y PE + P+ DVWSLG ILY + G P
Sbjct: 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
Query: 245 FDGSTLR-ELRERVLRGKYRIPF--YMSTDCENLLKKFLVLNPAKRASLE 291
F + ++ + I F D +++LK L +P +R S+
Sbjct: 239 FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIP 288
Score = 171 bits (435), Expect = 3e-48
Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
+L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ I+H
Sbjct: 92 RLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 150
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEF---TPGNKLDTFCGSPPYAAPELFQGGAPVTSS 592
DLK N L+ + +K+ DFG +N+ T D+ G+ Y PE + + +
Sbjct: 151 SDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 209
Query: 593 GGAGTNHTHNSSI 605
G + + + S +
Sbjct: 210 GKSKSKISPKSDV 222
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 329 bits (847), Expect = e-108
Identities = 98/260 (37%), Positives = 143/260 (55%), Gaps = 17/260 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK-------LFREVRIM 99
Y+ + +G+G + V+ H PT KE A+KIID T S ++ +EV I+
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 100 KMLD-HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAV 158
+ + HPNI++L ET +LV + GE+FDYL + EKE R R ++ +
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 218
H+ I+HRDLK EN+LLD +MNIK+ DFGFS + PG KL CG+P Y APE+ +
Sbjct: 138 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIEC 197
Query: 219 KKYD-----GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMS 269
D G EVD+WS GVI+YTL++GS PF + ++ G Y+ S
Sbjct: 198 SMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYS 257
Query: 270 TDCENLLKKFLVLNPAKRAS 289
++L+ +FLV+ P KR +
Sbjct: 258 DTVKDLVSRFLVVQPQKRYT 277
Score = 180 bits (458), Expect = 2e-51
Identities = 49/119 (41%), Positives = 67/119 (56%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
++L ET +LV + GE+FDYL + EKE R R ++ + H+ I+
Sbjct: 87 IQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIV 146
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSG 593
HRDLK EN+LLD +MNIK+ DFGFS + PG KL CG+P Y APE+ + G
Sbjct: 147 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPG 205
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 333 bits (857), Expect = e-108
Identities = 101/261 (38%), Positives = 146/261 (55%), Gaps = 17/261 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK------LFREVRIMK 100
+Y + KT+G G +VKLA T K+VAI+II K + GS ++ + E+ I+K
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 195
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
L+HP I+K+ + E Y+V+E GGE+FD +V + R+KE + F Q++ AVQY
Sbjct: 196 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 254
Query: 161 CHQKKIIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 217
H+ IIHRDLK EN+LL S + IKI DFG S + + T CG+P Y APE+
Sbjct: 255 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 314
Query: 218 GKKYD--GPEVDVWSLGVILYTLVSGSLPF-DGSTLRELRERVLRGKYRIP----FYMST 270
VD WSLGVIL+ +SG PF + T L++++ GKY +S
Sbjct: 315 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 374
Query: 271 DCENLLKKFLVLNPAKRASLE 291
+L+KK LV++P R + E
Sbjct: 375 KALDLVKKLLVVDPKARFTTE 395
Score = 171 bits (435), Expect = 5e-47
Identities = 48/115 (41%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+K+ + E Y+V+E GGE+FD +V + R+KE + F Q++ AVQY H+ II
Sbjct: 203 IKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 261
Query: 535 HRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGG 586
HRDLK EN+LL S + IKI DFG S + + T CG+P Y APE+
Sbjct: 262 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSV 316
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 328 bits (842), Expect = e-108
Identities = 95/250 (38%), Positives = 146/250 (58%), Gaps = 9/250 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y ++ +GKG+F +V K T +E A+K+I+K + REV ++K LDHPN
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
I+KLF+++E + Y+V E +GGE+FD ++ R E +A +Q+ S + Y H+ I
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 167 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+HRDLK EN+LL+S + +IKI DFG S F K+ G+ Y APE+ + Y
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR-GTY-D 200
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKKF 279
+ DVWS GVILY L+SG+ PF G ++ +RV GKY +S D ++L++K
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKM 260
Query: 280 LVLNPAKRAS 289
L +P+ R +
Sbjct: 261 LTFHPSLRIT 270
Score = 165 bits (421), Expect = 1e-46
Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++KLF+++E + Y+V E +GGE+FD ++ R E +A +Q+ S + Y H+ I
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 534 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGG 586
+HRDLK EN+LL+S + +IKI DFG S F K+ G+ Y APE+ +G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 329 bits (845), Expect = e-107
Identities = 92/250 (36%), Positives = 136/250 (54%), Gaps = 8/250 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
Y + + +GKG F+ V+ H TG E A KII+ +L+ QKL RE RI + L HPN
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 89
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV+L I+ E YLV + +GGE+F+ +V E +A +QI+ ++ YCH I
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 149
Query: 167 IHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+HR+LK ENLLL S+ +K+ADFG + E F G+P Y +PE+ + Y
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY-S 208
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKKF 279
VD+W+ GVILY L+ G PF L ++ G Y P ++ + ++L+
Sbjct: 209 KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSM 268
Query: 280 LVLNPAKRAS 289
L +NP KR +
Sbjct: 269 LTVNPKKRIT 278
Score = 162 bits (412), Expect = 2e-44
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
++L I+ E YLV + +GGE+F+ +V E +A +QI+ ++ YCH I+
Sbjct: 91 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV 150
Query: 535 HRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
HR+LK ENLLL S+ +K+ADFG + E F G+P Y +PE+ +
Sbjct: 151 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 204
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 328 bits (842), Expect = e-107
Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 21/263 (7%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
Y +LK IG G +KV + + AIK ++ + + +L E+ + L +
Sbjct: 10 IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68
Query: 107 --IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
I++L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ
Sbjct: 69 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEF---TPGNKLDTFCGSPPYAAPELFQGKKY 221
I+H DLK N L+ + +K+ DFG +N+ T D+ G+ Y PE +
Sbjct: 128 GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 222 D----------GPEVDVWSLGVILYTLVSGSLPFDGSTLR-ELRERVLRGKYRIPF--YM 268
P+ DVWSLG ILY + G PF + ++ + I F
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 246
Query: 269 STDCENLLKKFLVLNPAKRASLE 291
D +++LK L +P +R S+
Sbjct: 247 EKDLQDVLKCCLKRDPKQRISIP 269
Score = 171 bits (435), Expect = 7e-48
Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
+L+ T++ +Y+VME ++ +L + E ++ ++ ++ AV HQ I+H
Sbjct: 73 RLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 131
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEF---TPGNKLDTFCGSPPYAAPELFQGGAPVTSS 592
DLK N L+ + +K+ DFG +N+ T D+ G+ Y PE + + +
Sbjct: 132 SDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 190
Query: 593 GGAGTNHTHNSSI 605
G + + + S +
Sbjct: 191 GKSKSKISPKSDV 203
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 327 bits (840), Expect = e-106
Identities = 90/298 (30%), Positives = 143/298 (47%), Gaps = 17/298 (5%)
Query: 9 STGKSETGRGSENNISSSRLMSSRRESSRRERDEPHIG-KYKLLKTIGKGNFAKVKLAKH 67
+ K + + + KY IG+G + V+ H
Sbjct: 56 AEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVH 115
Query: 68 VPTGKEVAIKIIDKTQLNP------GSLQKLFREVRIMKML-DHPNIVKLFQVIETEKTL 120
TG E A+KI++ T + RE I++ + HP+I+ L E+ +
Sbjct: 116 RATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFM 175
Query: 121 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 180
+LV + GE+FDYL + EKE R+ R ++ AV + H I+HRDLK EN+LLD
Sbjct: 176 FLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD 235
Query: 181 EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD-----GPEVDVWSLGVIL 235
M I+++DFGFS PG KL CG+P Y APE+ + + G EVD+W+ GVIL
Sbjct: 236 NMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295
Query: 236 YTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKKFLVLNPAKRAS 289
+TL++GS PF + ++ G+Y+ S+ ++L+ + L ++P R +
Sbjct: 296 FTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLT 353
Score = 178 bits (453), Expect = 4e-50
Identities = 49/119 (41%), Positives = 68/119 (57%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+ L E+ ++LV + GE+FDYL + EKE R+ R ++ AV + H I+
Sbjct: 163 ITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIV 222
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSG 593
HRDLK EN+LLD M I+++DFGFS PG KL CG+P Y APE+ + T G
Sbjct: 223 HRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPG 281
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 326 bits (838), Expect = e-104
Identities = 100/275 (36%), Positives = 154/275 (56%), Gaps = 13/275 (4%)
Query: 23 ISSSRLMSSRRESSRRERDEPHIGK-YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK 81
+ SS RE+ + + Y ++ +GKG+F +V K T +E A+K+I+K
Sbjct: 1 MHHHHHHSSGRENLYFQGT---FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINK 57
Query: 82 TQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR 141
+ REV ++K LDHPNI+KLF+++E + Y+V E +GGE+FD ++ R
Sbjct: 58 ASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR 117
Query: 142 MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPG 198
E +A +Q+ S + Y H+ I+HRDLK EN+LL+S + +IKI DFG S F
Sbjct: 118 FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
Query: 199 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVL 258
K+ G+ Y APE+ +G Y + DVWS GVILY L+SG+ PF G ++ +RV
Sbjct: 178 TKMKDRIGTAYYIAPEVLRG-TY-DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
Query: 259 RGKYRIPF----YMSTDCENLLKKFLVLNPAKRAS 289
GKY +S D ++L++K L +P+ R +
Sbjct: 236 TGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT 270
Score = 159 bits (405), Expect = 2e-42
Identities = 45/114 (39%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+KLF+++E + Y+V E +GGE+FD ++ R E +A +Q+ S + Y H+ I+
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIV 143
Query: 535 HRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
HRDLK EN+LL+S + +IKI DFG S F K+ G+ Y APE+ +G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 323 bits (831), Expect = e-104
Identities = 93/251 (37%), Positives = 143/251 (56%), Gaps = 9/251 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+L + +GKG F+ V+ V G+E A II+ +L+ QKL RE RI ++L HPN
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPN 71
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV+L I E YL+ + +GGE+F+ +V E +A +QI+ AV +CHQ +
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 131
Query: 167 IHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQGKKYD 222
+HR+LK ENLLL S+ +K+ADFG + E + F G+P Y +PE+ + Y
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY- 190
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKK 278
G VD+W+ GVILY L+ G PF L +++ G Y P ++ + ++L+ K
Sbjct: 191 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 250
Query: 279 FLVLNPAKRAS 289
L +NP+KR +
Sbjct: 251 MLTINPSKRIT 261
Score = 154 bits (392), Expect = 5e-41
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 7/122 (5%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
++L I E YL+ + +GGE+F+ +V E +A +QI+ AV +CHQ ++
Sbjct: 73 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVV 132
Query: 535 HRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQG---GA 587
HR+LK ENLLL S+ +K+ADFG + E + F G+P Y +PE+ + G
Sbjct: 133 HRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK 192
Query: 588 PV 589
PV
Sbjct: 193 PV 194
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 321 bits (824), Expect = e-102
Identities = 101/278 (36%), Positives = 152/278 (54%), Gaps = 9/278 (3%)
Query: 19 SENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKI 78
N+ + + + Y+ +K +G G + +V L + T E AIKI
Sbjct: 10 GRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKI 69
Query: 79 IDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVL 138
I KT ++ S KL EV ++K+LDHPNI+KL+ E ++ YLVME GGE+FD ++
Sbjct: 70 IRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH 129
Query: 139 HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS---EMNIKIADFGFSNEF 195
+ E +A +Q++S V Y H+ I+HRDLK ENLLL+S + IKI DFG S F
Sbjct: 130 RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189
Query: 196 TPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRE 255
K+ G+ Y APE+ + KY + DVWS+GVIL+ L++G PF G T +E+
Sbjct: 190 ENQKKMKERLGTAYYIAPEVLRK-KY-DEKCDVWSIGVILFILLAGYPPFGGQTDQEILR 247
Query: 256 RVLRGKYRIPF----YMSTDCENLLKKFLVLNPAKRAS 289
+V +GKY +S ++L+K+ L + +R S
Sbjct: 248 KVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRIS 285
Score = 157 bits (399), Expect = 2e-41
Identities = 46/114 (40%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+KL+ E ++ YLVME GGE+FD ++ + E +A +Q++S V Y H+ I+
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIV 158
Query: 535 HRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
HRDLK ENLLL+S + IKI DFG S F K+ G+ Y APE+ +
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK 212
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 314 bits (807), Expect = e-102
Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 62/329 (18%)
Query: 19 SENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKI 78
++ S + + S + KY L IG+G++ V++A T AIKI
Sbjct: 4 HHHHSSGRENLYFQGGSLLELQK-----KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKI 58
Query: 79 IDKTQL---NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDY 135
++K ++ NP ++++ EVR+MK L HPNI +L++V E E+ + LVME GG + D
Sbjct: 59 MNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDK 118
Query: 136 LVLHGRMK----------------------------------------EKEARAKFRQIV 155
L + EK RQI
Sbjct: 119 LNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDS--EMNIKIADFGFSNEFTPGN-----KLDTFCGSP 208
SA+ Y H + I HRD+K EN L + IK+ DFG S EF N + T G+P
Sbjct: 179 SALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTP 238
Query: 209 PYAAPELFQG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF 266
+ APE+ + Y GP+ D WS GV+L+ L+ G++PF G + +VL K
Sbjct: 239 YFVAPEVLNTTNESY-GPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFEN 297
Query: 267 ----YMSTDCENLLKKFLVLNPAKRASLE 291
+S +LL L N +R
Sbjct: 298 PNYNVLSPLARDLLSNLLNRNVDERFDAM 326
Score = 146 bits (371), Expect = 4e-39
Identities = 44/159 (27%), Positives = 61/159 (38%), Gaps = 47/159 (29%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMK----------------------- 510
+ +L++V E E+ + LVME GG + D L +
Sbjct: 90 IARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149
Query: 511 -----------------EKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS--EMNI 551
EK RQI SA+ Y H + I HRD+K EN L + I
Sbjct: 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEI 209
Query: 552 KIADFGFSNEFTPGN-----KLDTFCGSPPYAAPELFQG 585
K+ DFG S EF N + T G+P + APE+
Sbjct: 210 KLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT 248
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 312 bits (801), Expect = e-101
Identities = 65/288 (22%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 35 SSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFR 94
S R D ++ + +G+G F +V A++ + AIK I T+ L +
Sbjct: 1 SLRYASD------FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE---EKLSTILS 51
Query: 95 EVRIMKMLDHPNIVKLFQV-------------IETEKTLYLVMEYASGGEVFDYLVLHGR 141
EV ++ L+H +V+ + ++ + TL++ MEY G ++D +
Sbjct: 52 EVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL 111
Query: 142 MKEKEARAK-FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-------- 192
++++ + FRQI+ A+ Y H + IIHRDLK N+ +D N+KI DFG +
Sbjct: 112 NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 193 -------NEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 245
N + L + G+ Y A E+ G + ++D++SLG+I + ++
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--FS 229
Query: 246 DGSTLRELRERVLRGKYRIPFYM----STDCENLLKKFLVLNPAKRAS 289
G + +++ P + +++ + +P KR
Sbjct: 230 TGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
Score = 159 bits (404), Expect = 5e-44
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 479 QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAK-FRQIVSAVQYCHQKKIIHRD 537
++ + TL++ MEY G ++D + ++++ + FRQI+ A+ Y H + IIHRD
Sbjct: 82 TAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRD 141
Query: 538 LKAENLLLDSEMNIKIADFGFS---------------NEFTPGNKLDTFCGSPPYAAPEL 582
LK N+ +D N+KI DFG + N + L + G+ Y A E+
Sbjct: 142 LKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV 201
Query: 583 FQG 585
G
Sbjct: 202 LDG 204
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 312 bits (802), Expect = e-101
Identities = 90/250 (36%), Positives = 131/250 (52%), Gaps = 11/250 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+ ++ +G G F++V L K TGK A+K I K+ L E+ ++K + H N
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHEN 67
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV L + E+ YLVM+ SGGE+FD ++ G EK+A +Q++SAV+Y H+ I
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGI 127
Query: 167 IHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+HRDLK ENLL + I I DFG S G + T CG+P Y APE+ K Y
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLAQKPY-S 185
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKKF 279
VD WS+GVI Y L+ G PF T +L E++ G Y +S ++ +
Sbjct: 186 KAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHL 245
Query: 280 LVLNPAKRAS 289
L +P +R +
Sbjct: 246 LEKDPNERYT 255
Score = 154 bits (391), Expect = 4e-42
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+ L + E+ YLVM+ SGGE+FD ++ G EK+A +Q++SAV+Y H+ I+
Sbjct: 69 VTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIV 128
Query: 535 HRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
HRDLK ENLL + I I DFG S G + T CG+P Y APE+
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLAQ 181
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 317 bits (814), Expect = e-101
Identities = 103/251 (41%), Positives = 151/251 (60%), Gaps = 10/251 (3%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-NPGSLQKLFREVRIMKMLDHP 105
+YK + +GKG+F +V L K TG+E A+K+I K Q+ + L REV+++K LDHP
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
NI+KL++ E + YLV E +GGE+FD ++ R E +A RQ++S + Y H+ K
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 166 IIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
I+HRDLK ENLLL+S + NI+I DFG S F K+ G+ Y APE+ G Y
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TY- 204
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKK 278
+ DVWS GVILY L+SG PF+G+ ++ ++V +GKY +S ++L++K
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 264
Query: 279 FLVLNPAKRAS 289
L P+ R S
Sbjct: 265 MLTYVPSMRIS 275
Score = 158 bits (401), Expect = 6e-42
Identities = 48/114 (42%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+KL++ E + YLV E +GGE+FD ++ R E +A RQ++S + Y H+ KI+
Sbjct: 89 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIV 148
Query: 535 HRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
HRDLK ENLLL+S + NI+I DFG S F K+ G+ Y APE+ G
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 202
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 317 bits (814), Expect = e-101
Identities = 93/261 (35%), Positives = 146/261 (55%), Gaps = 20/261 (7%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL-----------NPGSLQKLFRE 95
Y ++ +G G + +V L K E AIK+I K+Q ++++ E
Sbjct: 37 SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNE 96
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIV 155
+ ++K LDHPNI+KLF V E +K YLV E+ GGE+F+ ++ + E +A +QI+
Sbjct: 97 ISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQIL 156
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAA 212
S + Y H+ I+HRD+K EN+LL++ +NIKI DFG S+ F+ KL G+ Y A
Sbjct: 157 SGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIA 216
Query: 213 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YM 268
PE+ + KY + DVWS GVI+Y L+ G PF G +++ ++V +GKY F +
Sbjct: 217 PEVLKK-KY-NEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNI 274
Query: 269 STDCENLLKKFLVLNPAKRAS 289
S + + L+K L + KR +
Sbjct: 275 SDEAKELIKLMLTYDYNKRCT 295
Score = 159 bits (404), Expect = 3e-42
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIH 535
KLF V E +K YLV E+ GGE+F+ ++ + E +A +QI+S + Y H+ I+H
Sbjct: 110 KLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVH 169
Query: 536 RDLKAENLLLDS---EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
RD+K EN+LL++ +NIKI DFG S+ F+ KL G+ Y APE+ +
Sbjct: 170 RDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK 222
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 310 bits (796), Expect = e-100
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 25/268 (9%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
Y ++ +G+G F+ V L + + G A+K I + ++ RE + ++ +HPN
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQ--DREEAQREADMHRLFNHPN 87
Query: 107 IVKLFQVIETEKT----LYLVMEYASGGEVFDYL----VLHGRMKEKEARAKFRQIVSAV 158
I++L E+ +L++ + G +++ + + E + I +
Sbjct: 88 ILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGL 147
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN----------EFTPGNKLDTFCGSP 208
+ H K HRDLK N+LL E + D G N + +
Sbjct: 148 EAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 209 PYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFDGSTLR-ELRERVLRGKYRIP 265
Y APELF + + DVWSLG +LY ++ G P+D + + ++ + IP
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIP 267
Query: 266 FY--MSTDCENLLKKFLVLNPAKRASLE 291
S+ LL + ++P +R +
Sbjct: 268 QSPRHSSALWQLLNSMMTVDPHQRPHIP 295
Score = 147 bits (372), Expect = 2e-39
Identities = 27/129 (20%), Positives = 45/129 (34%), Gaps = 18/129 (13%)
Query: 475 LKLFQVIETEKT----LYLVMEYASGGEVFDYL----VLHGRMKEKEARAKFRQIVSAVQ 526
L+L E+ +L++ + G +++ + + E + I ++
Sbjct: 89 LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLE 148
Query: 527 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN----------EFTPGNKLDTFCGSPP 576
H K HRDLK N+LL E + D G N + +
Sbjct: 149 AIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS 208
Query: 577 YAAPELFQG 585
Y APELF
Sbjct: 209 YRAPELFSV 217
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 310 bits (796), Expect = e-100
Identities = 88/258 (34%), Positives = 143/258 (55%), Gaps = 17/258 (6%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL---NPGSLQKLFREVRIMKMLD 103
Y+L + IGKG F+ V+ + TG++ A+KI+D + S + L RE I ML
Sbjct: 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMK----EKEARAKFRQIVSAVQ 159
HP+IV+L + ++ LY+V E+ G ++ +V E A RQI+ A++
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 160 YCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPEL 215
YCH IIHRD+K +LL S+ +K+ FG + + G G+P + APE+
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV 204
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPF----YMSTD 271
+ + Y G VDVW GVIL+ L+SG LPF G+ L E +++GKY++ ++S
Sbjct: 205 VKREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISES 262
Query: 272 CENLLKKFLVLNPAKRAS 289
++L+++ L+L+PA+R +
Sbjct: 263 AKDLVRRMLMLDPAERIT 280
Score = 152 bits (385), Expect = 7e-41
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMK----EKEARAKFRQIVSAVQYCHQK 531
+L + ++ LY+V E+ G ++ +V E A RQI+ A++YCH
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 532 KIIHRDLKAENLLLDSE---MNIKIADFGFSNEFT-PGNKLDTFCGSPPYAAPELFQG 585
IIHRD+K +LL S+ +K+ FG + + G G+P + APE+ +
Sbjct: 150 NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR 207
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 305 bits (784), Expect = 3e-99
Identities = 80/263 (30%), Positives = 132/263 (50%), Gaps = 14/263 (5%)
Query: 42 EPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKM 101
Y++L TIG G++ + + + GK + K +D + Q L EV +++
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 102 LDHPNIVKLFQVI--ETEKTLYLVMEYASGGEVFDYLVLHGRMK----EKEARAKFRQIV 155
L HPNIV+ + I T TLY+VMEY GG++ + + + E+ Q+
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121
Query: 156 SAVQYCHQKK-----IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-DTFCGSPP 209
A++ CH++ ++HRDLK N+ LD + N+K+ DFG + TF G+P
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPY 181
Query: 210 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIPFYM 268
Y +PE Y+ + D+WSLG +LY L + PF + +EL ++ GK+ RIP+
Sbjct: 182 YMSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY 240
Query: 269 STDCENLLKKFLVLNPAKRASLE 291
S + ++ + L L R S+E
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVE 263
Score = 137 bits (346), Expect = 2e-36
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 480 VIETEKTLYLVMEYASGGEVFDYLVLHGRMK----EKEARAKFRQIVSAVQYCHQKK--- 532
+ T TLY+VMEY GG++ + + + E+ Q+ A++ CH++
Sbjct: 75 IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGG 134
Query: 533 --IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-DTFCGSPPYAAPELFQG 585
++HRDLK N+ LD + N+K+ DFG + TF G+P Y +PE
Sbjct: 135 HTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNR 190
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 303 bits (778), Expect = 3e-98
Identities = 88/255 (34%), Positives = 139/255 (54%), Gaps = 13/255 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL----NPGSLQKLFREVRIMKML 102
Y++ + +G G FA V+ + TGKE A K I K +L S +++ REV I++ +
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
HPNI+ L + E + + L++E SGGE+FD+L + E EA +QI+ V Y H
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 125
Query: 163 QKKIIHRDLKAENLLLDSE----MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 218
K+I H DLK EN++L + IK+ DFG +++ GN+ G+P + APE+
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 185
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---RIPF-YMSTDCEN 274
+ G E D+WS+GVI Y L+SG+ PF G T +E + Y F S ++
Sbjct: 186 EPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKD 244
Query: 275 LLKKFLVLNPAKRAS 289
+++ LV +P +R +
Sbjct: 245 FIRRLLVKDPKRRMT 259
Score = 159 bits (405), Expect = 3e-44
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L + E + + L++E SGGE+FD+L + E EA +QI+ V Y H K+I
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRI 129
Query: 534 IHRDLKAENLLLDSE----MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
H DLK EN++L + IK+ DFG +++ GN+ G+P + APE
Sbjct: 130 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 302 bits (776), Expect = 2e-97
Identities = 88/255 (34%), Positives = 135/255 (52%), Gaps = 13/255 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL----NPGSLQKLFREVRIMKML 102
Y + +G G FA VK + TG + A K I K + S + + REV I+K +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
HPN++ L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 QKKIIHRDLKAENLLLDSE----MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 218
+I H DLK EN++L IKI DFG +++ GN+ G+P + APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---RIPF-YMSTDCEN 274
+ G E D+WS+GVI Y L+SG+ PF G T +E V Y F S ++
Sbjct: 192 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKD 250
Query: 275 LLKKFLVLNPAKRAS 289
+++ LV +P KR +
Sbjct: 251 FIRRLLVKDPKKRMT 265
Score = 158 bits (401), Expect = 3e-43
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L +V E + + L++E +GGE+FD+L + E+EA +QI++ V Y H +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 534 IHRDLKAENLLLDSE----MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
H DLK EN++L IKI DFG +++ GN+ G+P + APE
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 302 bits (776), Expect = 3e-97
Identities = 82/294 (27%), Positives = 134/294 (45%), Gaps = 38/294 (12%)
Query: 30 SSRRESSRRERDEPHIG--KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG 87
+S R+ S +G + ++ + + +G FA V A+ V +G+E A+K +
Sbjct: 10 ASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEE 67
Query: 88 SLQKLFREVRIMKML-DHPNIVKLF-------QVIETEKTLYLVMEYASGGEVFDYLV-- 137
+ + +EV MK L HPNIV+ + +T + +L++ G++ ++L
Sbjct: 68 KNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKM 127
Query: 138 -LHGRMKEKEARAKFRQIVSAVQYCHQKK--IIHRDLKAENLLLDSEMNIKIADFGFSNE 194
G + F Q AVQ+ H++K IIHRDLK ENLLL ++ IK+ DFG +
Sbjct: 128 ESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187
Query: 195 FTPGNKLD-------------TFCGSPPYAAPELFQ--GKKYDGPEVDVWSLGVILYTLV 239
+ T +P Y PE+ G + D+W+LG ILY L
Sbjct: 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLC 247
Query: 240 SGSLPFDGSTLRELRERVLRGKYRIPFY--MSTDCENLLKKFLVLNPAKRASLE 291
PF+ R++ GKY IP + T +L++ L +NP +R S+
Sbjct: 248 FRQHPFEDGAKL----RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIA 297
Score = 141 bits (356), Expect = 4e-37
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 20/132 (15%)
Query: 479 QVIETEKTLYLVMEYASGGEVFDYLV---LHGRMKEKEARAKFRQIVSAVQYCHQKK--I 533
+ +T + +L++ G++ ++L G + F Q AVQ+ H++K I
Sbjct: 100 EESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPI 159
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD-------------TFCGSPPYAAP 580
IHRDLK ENLLL ++ IK+ DFG + + T +P Y P
Sbjct: 160 IHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTP 219
Query: 581 ELFQ--GGAPVT 590
E+ P+
Sbjct: 220 EIIDLYSNFPIG 231
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 301 bits (773), Expect = 1e-96
Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 17/300 (5%)
Query: 2 NDKSFRYSTGKSETGRGSENNISSSRLMSSRRESSRRERDEPHIG----KYKLLKTIGKG 57
+ S G S +++++S + D + +++ +G+G
Sbjct: 5 HHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRG 64
Query: 58 NFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE 117
+ V K T K A+K++ KT + + E+ ++ L HPNI+KL ++ ET
Sbjct: 65 ATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETP 120
Query: 118 KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 177
+ LV+E +GGE+FD +V G E++A +QI+ AV Y H+ I+HRDLK ENLL
Sbjct: 121 TEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLL 180
Query: 178 L---DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 234
+ +KIADFG S + T CG+P Y APE+ +G Y GPEVD+WS+G+I
Sbjct: 181 YATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAY-GPEVDMWSVGII 239
Query: 235 LYTLVSGSLPFDGSTL-RELRERVLRGKYRIPF----YMSTDCENLLKKFLVLNPAKRAS 289
Y L+ G PF + + R+L +Y +S + ++L++K +VL+P KR +
Sbjct: 240 TYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLT 299
Score = 157 bits (399), Expect = 7e-43
Identities = 48/114 (42%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+KL ++ ET + LV+E +GGE+FD +V G E++A +QI+ AV Y H+ I+
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIV 170
Query: 535 HRDLKAENLLL---DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
HRDLK ENLL + +KIADFG S + T CG+P Y APE+ +G
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRG 224
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 300 bits (770), Expect = 1e-96
Identities = 89/255 (34%), Positives = 135/255 (52%), Gaps = 13/255 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL----NPGSLQKLFREVRIMKML 102
Y + + +G G FA VK + TG E A K I K Q S +++ REV I++ +
Sbjct: 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV 72
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
H N++ L V E + L++E SGGE+FD+L + E+EA + +QI+ V Y H
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 163 QKKIIHRDLKAENLLLDSE----MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 218
KKI H DLK EN++L + +IK+ DFG ++E G + G+P + APE+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---RIPF-YMSTDCEN 274
+ G E D+WS+GVI Y L+SG+ PF G T +E + Y F + S ++
Sbjct: 193 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 275 LLKKFLVLNPAKRAS 289
++K LV KR +
Sbjct: 252 FIRKLLVKETRKRLT 266
Score = 157 bits (399), Expect = 4e-43
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L V E + L++E SGGE+FD+L + E+EA + +QI+ V Y H KKI
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 534 IHRDLKAENLLLDSE----MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
H DLK EN++L + +IK+ DFG ++E G + G+P + APE
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE 188
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 299 bits (769), Expect = 4e-96
Identities = 85/256 (33%), Positives = 136/256 (53%), Gaps = 20/256 (7%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHP 105
Y++ + IG G+++ K H T E A+KIIDK++ +P E+ I+ HP
Sbjct: 23 GYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP------TEEIEILLRYGQHP 76
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
NI+ L V + K +Y+V E GGE+ D ++ E+EA A I V+Y H +
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 166 IIHRDLKAENLLLDSE----MNIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQGKK 220
++HRDLK N+L E +I+I DFGF+ + N L T C + + APE+ + +
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQG 196
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGS---TLRELRERVLRGKYRIPF----YMSTDCE 273
YD D+WSLGV+LYT+++G PF T E+ R+ GK+ + +S +
Sbjct: 197 YD-AACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 274 NLLKKFLVLNPAKRAS 289
+L+ K L ++P +R +
Sbjct: 256 DLVSKMLHVDPHQRLT 271
Score = 158 bits (402), Expect = 3e-43
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+ L V + K +Y+V E GGE+ D ++ E+EA A I V+Y H + ++
Sbjct: 79 ITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVV 138
Query: 535 HRDLKAENLLLDSE----MNIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQG 585
HRDLK N+L E +I+I DFGF+ + N L T C + + APE+ +
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLER 194
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 298 bits (765), Expect = 8e-96
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 12/254 (4%)
Query: 47 KYKLL-KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH- 104
Y L K +G+G FA V+ TG+E A K + K + ++ E+ ++++
Sbjct: 29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSC 88
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLV--LHGRMKEKEARAKFRQIVSAVQYCH 162
P ++ L +V E + L++EYA+GGE+F + L + E + +QI+ V Y H
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 163 QKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
Q I+H DLK +N+LL S +IKI DFG S + +L G+P Y APE+
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYD 208
Query: 220 KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---RIPF-YMSTDCENL 275
D+W++G+I Y L++ + PF G +E + + F +S +
Sbjct: 209 PI-TTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDF 267
Query: 276 LKKFLVLNPAKRAS 289
++ LV NP KR +
Sbjct: 268 IQSLLVKNPEKRPT 281
Score = 158 bits (402), Expect = 2e-43
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLV--LHGRMKEKEARAKFRQIVSAVQYCHQK 531
++ L +V E + L++EYA+GGE+F + L + E + +QI+ V Y HQ
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN 150
Query: 532 KIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
I+H DLK +N+LL S +IKI DFG S + +L G+P Y APE
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPE 203
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 297 bits (763), Expect = 5e-95
Identities = 90/255 (35%), Positives = 134/255 (52%), Gaps = 13/255 (5%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL----NPGSLQKLFREVRIMKML 102
Y + + +G G FA VK + TG E A K I K Q +++ REV I++ +
Sbjct: 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV 72
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
HPNI+ L V E + L++E SGGE+FD+L + E+EA + +QI+ V Y H
Sbjct: 73 LHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 163 QKKIIHRDLKAENLLLDSE----MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 218
KKI H DLK EN++L + +IK+ DFG ++E G + G+P + APE+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---RIPF-YMSTDCEN 274
+ G E D+WS+GVI Y L+SG+ PF G T +E + Y F S ++
Sbjct: 193 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 275 LLKKFLVLNPAKRAS 289
++K LV KR +
Sbjct: 252 FIRKLLVKETRKRLT 266
Score = 156 bits (397), Expect = 2e-42
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ L V E + L++E SGGE+FD+L + E+EA + +QI+ V Y H KKI
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 534 IHRDLKAENLLLDSE----MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
H DLK EN++L + +IK+ DFG ++E G + G+P + APE
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE 188
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 295 bits (757), Expect = 1e-94
Identities = 91/262 (34%), Positives = 138/262 (52%), Gaps = 25/262 (9%)
Query: 47 KYKLL---KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD 103
Y L K +G+G+F+ + H + + A+KII K +E+ +K+ +
Sbjct: 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME-----ANTQKEITALKLCE 63
Query: 104 -HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
HPNIVKL +V + +LVME +GGE+F+ + E EA R++VSAV + H
Sbjct: 64 GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMH 123
Query: 163 QKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQG 218
++HRDLK ENLL E + IKI DFGF+ P N+ L T C + YAAPEL
Sbjct: 124 DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQ 183
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGST-------LRELRERVLRGKYRIPF----Y 267
YD D+WSLGVILYT++SG +PF E+ +++ +G +
Sbjct: 184 NGYD-ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKN 242
Query: 268 MSTDCENLLKKFLVLNPAKRAS 289
+S + ++L++ L ++P KR
Sbjct: 243 VSQEAKDLIQGLLTVDPNKRLK 264
Score = 156 bits (397), Expect = 9e-43
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
+KL +V + +LVME +GGE+F+ + E EA R++VSAV + H ++
Sbjct: 69 VKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVV 128
Query: 535 HRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNK-LDTFCGSPPYAAPELFQG 585
HRDLK ENLL E + IKI DFGF+ P N+ L T C + YAAPEL
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQ 183
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 289 bits (741), Expect = 3e-92
Identities = 63/250 (25%), Positives = 120/250 (48%), Gaps = 11/250 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY + + +G+G F V + K K + + + +E+ I+ + H N
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD---QVLVKKEISILNIARHRN 62
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKK 165
I+ L + E+ + L ++ E+ SG ++F+ + + E+E + Q+ A+Q+ H
Sbjct: 63 ILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 166 IIHRDLKAENLLLDSEMN--IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
I H D++ EN++ + + IKI +FG + + PG+ +P Y APE+ Q
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVV-S 181
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---RIPF-YMSTDCENLLKKF 279
D+WSLG ++Y L+SG PF T +++ E ++ +Y F +S + + + +
Sbjct: 182 TATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRL 241
Query: 280 LVLNPAKRAS 289
LV R +
Sbjct: 242 LVKERKSRMT 251
Score = 151 bits (384), Expect = 5e-41
Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKK 532
+L L + E+ + L ++ E+ SG ++F+ + + E+E + Q+ A+Q+ H
Sbjct: 63 ILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 533 IIHRDLKAENLLLDSEMN--IKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
I H D++ EN++ + + IKI +FG + + PG+ +P Y APE
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE 173
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 290 bits (745), Expect = 5e-92
Identities = 72/287 (25%), Positives = 128/287 (44%), Gaps = 10/287 (3%)
Query: 10 TGKSETGRGSENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVP 69
GK + + ++ + + + Y +L+ +G G F V
Sbjct: 15 RGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKA 74
Query: 70 TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASG 129
TG+ K I+ + E+ IM L HP ++ L E + + L++E+ SG
Sbjct: 75 TGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG 132
Query: 130 GEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS--EMNIKI 186
GE+FD + +M E E RQ +++ H+ I+H D+K EN++ ++ ++KI
Sbjct: 133 GELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKI 192
Query: 187 ADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 246
DFG + + P + + +AAPE+ + G D+W++GV+ Y L+SG PF
Sbjct: 193 IDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPV-GFYTDMWAIGVLGYVLLSGLSPFA 251
Query: 247 GSTLRELRERVLRGKY---RIPF-YMSTDCENLLKKFLVLNPAKRAS 289
G E + V R + F +S + ++ +K L P KR +
Sbjct: 252 GEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT 298
Score = 149 bits (378), Expect = 1e-39
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKK 532
L+ L E + + L++E+ SGGE+FD + +M E E RQ +++ H+
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 169
Query: 533 IIHRDLKAENLLLDS--EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
I+H D+K EN++ ++ ++KI DFG + + P + + +AAPE+
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR 224
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 286 bits (734), Expect = 2e-91
Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 40/280 (14%)
Query: 47 KYKLLK-TIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DH 104
Y+L + +G+G A+V+ ++ T +E A+KII+K + ++FREV ++ H
Sbjct: 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH--IRSRVFREVEMLYQCQGH 70
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
N+++L + E E YLV E GG + ++ E EA + + SA+ + H K
Sbjct: 71 RNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK 130
Query: 165 KIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGN--------KLDTFCGSPPYAAP 213
I HRDLK EN+L + +KI DF + +L T CGS Y AP
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 214 ELFQG-----KKYDGPEVDVWSLGVILYTLVSGSLPFDG---------------STLREL 253
E+ + YD D+WSLGVILY L+SG PF G + L
Sbjct: 191 EVVEAFSEEASIYD-KRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249
Query: 254 RERVLRGKYRIPF----YMSTDCENLLKKFLVLNPAKRAS 289
E + GKY P ++S ++L+ K LV + +R S
Sbjct: 250 FESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS 289
Score = 152 bits (387), Expect = 1e-41
Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKII 534
L+L + E E YLV E GG + ++ E EA + + SA+ + H K I
Sbjct: 74 LELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 535 HRDLKAENLLLDSE---MNIKIADFGFSNEFTPGN--------KLDTFCGSPPYAAPELF 583
HRDLK EN+L + +KI DF + +L T CGS Y APE+
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 584 QGGAPVTSS 592
+ + S
Sbjct: 194 EAFSEEASI 202
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 289 bits (741), Expect = 3e-91
Identities = 89/300 (29%), Positives = 135/300 (45%), Gaps = 27/300 (9%)
Query: 9 STGKSETGRGSENNISSSRLMSSRRESSRRERDEPHIGKYKLL-KTIGKGNFAKVKLAKH 67
T + +S + + I YK+ + +G G KV +
Sbjct: 24 PTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFN 83
Query: 68 VPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHPNIVKLFQVIET----EKTLYL 122
T ++ A+K++ K REV + P+IV++ V E K L +
Sbjct: 84 KRTQEKFALKMLQDCP-------KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136
Query: 123 VMEYASGGEVFDYLVLHGRMK--EKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 180
VME GGE+F + G E+EA + I A+QY H I HRD+K ENLL S
Sbjct: 137 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTS 196
Query: 181 E---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 237
+ +K+ DFGF+ E T N L T C +P Y APE+ +KYD D+WSLGVI+Y
Sbjct: 197 KRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYI 255
Query: 238 LVSGSLPFDG----STLRELRERVLRGKYRIPF----YMSTDCENLLKKFLVLNPAKRAS 289
L+ G PF + ++ R+ G+Y P +S + + L++ L P +R +
Sbjct: 256 LLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT 315
Score = 147 bits (374), Expect = 5e-39
Identities = 46/115 (40%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 476 KLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGRMK--EKEARAKFRQIVSAVQYCH 529
++ V E K L +VME GGE+F + G E+EA + I A+QY H
Sbjct: 119 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 178
Query: 530 QKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
I HRD+K ENLL S+ +K+ DFGF+ E T N L T C +P Y APE
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 233
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 286 bits (733), Expect = 9e-91
Identities = 75/266 (28%), Positives = 141/266 (53%), Gaps = 5/266 (1%)
Query: 30 SSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSL 89
SS + + KY L+ IG+G+F K L K G++ IK I+ ++++
Sbjct: 8 SSGVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKER 67
Query: 90 QKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH--GRMKEKEA 147
++ REV ++ + HPNIV+ + E +LY+VM+Y GG++F + +E +
Sbjct: 68 EESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI 127
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-DTFCG 206
F QI A+++ H +KI+HRD+K++N+ L + +++ DFG + +L G
Sbjct: 128 LDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIG 187
Query: 207 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY-RIP 265
+P Y +PE+ + K Y+ + D+W+LG +LY L + F+ +++ L +++ G + +
Sbjct: 188 TPYYLSPEICENKPYN-NKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVS 246
Query: 266 FYMSTDCENLLKKFLVLNPAKRASLE 291
+ S D +L+ + NP R S+
Sbjct: 247 LHYSYDLRSLVSQLFKRNPRDRPSVN 272
Score = 129 bits (327), Expect = 5e-33
Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKI 533
+ + E +LY+VM+Y GG++F + +E + F QI A+++ H +KI
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKI 146
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL-DTFCGSPPYAAPELFQG 585
+HRD+K++N+ L + +++ DFG + +L G+P Y +PE+ +
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICEN 199
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 281 bits (722), Expect = 9e-89
Identities = 79/252 (31%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 47 KYKLLKT--IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
Y + KT +G G F +V + TG ++A KII + +++ E+ +M LDH
Sbjct: 88 FYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK--DKEEVKNEISVMNQLDH 145
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQ 163
N+++L+ E++ + LVMEY GGE+FD ++ + E + +QI +++ HQ
Sbjct: 146 ANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ 205
Query: 164 KKIIHRDLKAENLLLDS--EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
I+H DLK EN+L + IKI DFG + + P KL G+P + APE+ +
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNY-DF 264
Query: 222 DGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---RIPF-YMSTDCENLLK 277
D+WS+GVI Y L+SG PF G E +L ++ F +S + + +
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFIS 324
Query: 278 KFLVLNPAKRAS 289
K L+ + R S
Sbjct: 325 KLLIKEKSWRIS 336
Score = 150 bits (380), Expect = 5e-40
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKK 532
L++L+ E++ + LVMEY GGE+FD ++ + E + +QI +++ HQ
Sbjct: 148 LIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY 207
Query: 533 IIHRDLKAENLLLDS--EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
I+H DLK EN+L + IKI DFG + + P KL G+P + APE+
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNY 262
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 280 bits (718), Expect = 1e-88
Identities = 87/262 (33%), Positives = 131/262 (50%), Gaps = 28/262 (10%)
Query: 47 KYKLLK-TIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DH 104
Y+L K +G G KV H TG++ A+K++ + K +EV
Sbjct: 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-------KARQEVDHHWQASGG 81
Query: 105 PNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGRMK--EKEARAKFRQIVSAV 158
P+IV + V E ++ L ++ME GGE+F + G E+EA R I +A+
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 159 QYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 215
Q+ H I HRD+K ENLL S+ +K+ DFGF+ E T L T C +P Y APE+
Sbjct: 142 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTPCYTPYYVAPEV 200
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST----LRELRERVLRGKYRIPF----Y 267
+KYD D+WSLGVI+Y L+ G PF +T ++ R+ G+Y P
Sbjct: 201 LGPEKYD-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSE 259
Query: 268 MSTDCENLLKKFLVLNPAKRAS 289
+S D + L++ L +P +R +
Sbjct: 260 VSEDAKQLIRLLLKTDPTERLT 281
Score = 144 bits (366), Expect = 2e-38
Identities = 46/122 (37%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 469 SGGETLLKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGRMK--EKEARAKFRQIV 522
SGG ++ + V E ++ L ++ME GGE+F + G E+EA R I
Sbjct: 79 SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIG 138
Query: 523 SAVQYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNKLDTFCGSPPYAA 579
+A+Q+ H I HRD+K ENLL S+ +K+ DFGF+ E T L T C +P Y A
Sbjct: 139 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTPCYTPYYVA 197
Query: 580 PE 581
PE
Sbjct: 198 PE 199
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 284 bits (727), Expect = 4e-87
Identities = 71/250 (28%), Positives = 121/250 (48%), Gaps = 10/250 (4%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
Y + + +G G F V TG A K + + + + +E++ M +L HP
Sbjct: 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRHPT 215
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKK 165
+V L E + + ++ E+ SGGE+F+ + H +M E EA RQ+ + + H+
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 166 IIHRDLKAENLLLDS--EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
+H DLK EN++ + +K+ DFG + P + G+ +AAPE+ +GK G
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV-G 334
Query: 224 PEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKY---RIPF-YMSTDCENLLKKF 279
D+WS+GV+ Y L+SG PF G E V + F +S D ++ ++K
Sbjct: 335 YYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKL 394
Query: 280 LVLNPAKRAS 289
L+ +P R +
Sbjct: 395 LLADPNTRMT 404
Score = 147 bits (372), Expect = 1e-37
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVL-HGRMKEKEARAKFRQIVSAVQYCHQKK 532
L+ L E + + ++ E+ SGGE+F+ + H +M E EA RQ+ + + H+
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 533 IIHRDLKAENLLLDS--EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+H DLK EN++ + +K+ DFG + P + G+ +AAPE+ +G
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG 330
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 265 bits (679), Expect = 1e-83
Identities = 73/263 (27%), Positives = 109/263 (41%), Gaps = 31/263 (11%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
+K ++ IG G F +V AKH GK IK + +K REV+ + LDH NI
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNI 66
Query: 108 VKLFQVIETE----------------KTLYLVMEYASGGEVFDYLVLH--GRMKEKEARA 149
V + K L++ ME+ G + ++ ++ + A
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 150 KFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP 209
F QI V Y H KK+I+RDLK N+ L +KI DFG K G+
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLR 186
Query: 210 YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIPFYM 268
Y +PE + Y EVD+++LG+IL L+ F+ S + + G I
Sbjct: 187 YMSPEQISSQDYG-KEVDLYALGLILAELLHVCDTAFETS---KFFTDLRDGI--ISDIF 240
Query: 269 STDCENLLKKFLVLNPAKRASLE 291
+ LL+K L P R +
Sbjct: 241 DKKEKTLLQKLLSKKPEDRPNTS 263
Score = 140 bits (355), Expect = 2e-37
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 483 TEKTLYLVMEYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
K L++ ME+ G + ++ ++ + A F QI V Y H KK+I+RDLK
Sbjct: 91 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKP 150
Query: 541 ENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
N+ L +KI DFG K G+ Y +PE
Sbjct: 151 SNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISS 195
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 264 bits (676), Expect = 8e-83
Identities = 90/249 (36%), Positives = 139/249 (55%), Gaps = 15/249 (6%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQ-LNPGSLQKLFREVRIMKMLDHPN 106
+K K +G+G+F+ V LA+ + T +E AIKI++K + + + RE +M LDHP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 107 IVKL---FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYC 161
VKL FQ ++ LY + YA GE+ Y+ G E +F +IVSA++Y
Sbjct: 92 FVKLYFTFQ---DDEKLYFGLSYAKNGELLKYIRKIGSFDE--TCTRFYTAEIVSALEYL 146
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD---TFCGSPPYAAPELFQG 218
H K IIHRDLK EN+LL+ +M+I+I DFG + +P +K +F G+ Y +PEL
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 206
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKK 278
K D+W+LG I+Y LV+G PF + +++++ +Y P +L++K
Sbjct: 207 KSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEK 265
Query: 279 FLVLNPAKR 287
LVL+ KR
Sbjct: 266 LLVLDATKR 274
Score = 136 bits (345), Expect = 7e-36
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIH 535
FQ ++ LY + YA GE+ Y+ G E +F +IVSA++Y H K IIH
Sbjct: 99 FQ---DDEKLYFGLSYAKNGELLKYIRKIGSFDE--TCTRFYTAEIVSALEYLHGKGIIH 153
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD---TFCGSPPYAAPELFQG 585
RDLK EN+LL+ +M+I+I DFG + +P +K +F G+ Y +PEL
Sbjct: 154 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 206
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 265 bits (680), Expect = 6e-82
Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 49/283 (17%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD-HP 105
K +G G+ V G+ VA+K + E++++ D HP
Sbjct: 16 LVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFC-----DIALMEIKLLTESDDHP 69
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-------RMKEKEARAKFRQIVSAV 158
N+++ + T++ LY+ +E + D + KE + RQI S V
Sbjct: 70 NVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 159 QYCHQKKIIHRDLKAENLLLDSE-------------MNIKIADFGFSNEFTPGN-----K 200
+ H KIIHRDLK +N+L+ + + I I+DFG + G
Sbjct: 129 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN 188
Query: 201 LDTFCGSPPYAAPELFQG------KKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLREL 253
L+ G+ + APEL + K+ +D++S+G + Y ++S G PF RE
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE- 247
Query: 254 RERVLRGKYRIPFY-------MSTDCENLLKKFLVLNPAKRAS 289
++RG + + + + +L+ + + +P KR +
Sbjct: 248 -SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPT 289
Score = 141 bits (358), Expect = 1e-36
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 26/148 (17%)
Query: 475 LKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-------RMKEKEARAKFRQIVSAVQY 527
++ + T++ LY+ +E + D + KE + RQI S V +
Sbjct: 72 IRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 528 CHQKKIIHRDLKAENLLLDSE-------------MNIKIADFGFSNEFTPGN-----KLD 569
H KIIHRDLK +N+L+ + + I I+DFG + G L+
Sbjct: 131 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 570 TFCGSPPYAAPELFQGGAPVTSSGGAGT 597
G+ + APEL + + +
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTR 218
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 260 bits (666), Expect = 2e-81
Identities = 73/291 (25%), Positives = 119/291 (40%), Gaps = 10/291 (3%)
Query: 2 NDKSFRYSTGKSETGRGSENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAK 61
+ + S + + R S +S L S + SR E ++ L +G G++ +
Sbjct: 15 TENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQ--SFQRLSRLGHGSYGE 72
Query: 62 VKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIM-KMLDHPNIVKLFQVIETEKTL 120
V + G+ A+K P + EV K+ HP V+L Q E L
Sbjct: 73 VFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL 132
Query: 121 YLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 179
YL E G + + G + E + R + A+ + H + ++H D+K N+ L
Sbjct: 133 YLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG 191
Query: 180 SEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 239
K+ DFG E + G P Y APEL QG Y DV+SLG+ + +
Sbjct: 192 PRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYG-TAADVFSLGLTILEVA 249
Query: 240 SG-SLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRAS 289
LP G ++LR+ L +S++ ++L L +P RA+
Sbjct: 250 CNMELPHGGEGWQQLRQGYLPP--EFTAGLSSELRSVLVMMLEPDPKLRAT 298
Score = 136 bits (344), Expect = 9e-36
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQKKII 534
+L Q E LYL E G + + G + E + R + A+ + H + ++
Sbjct: 121 RLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLV 179
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGG 586
H D+K N+ L K+ DFG E + G P Y APEL QG
Sbjct: 180 HLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGS 231
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 260 bits (665), Expect = 2e-80
Identities = 42/323 (13%), Positives = 96/323 (29%), Gaps = 51/323 (15%)
Query: 13 SETGRGSENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGK 72
SE + + +++ S+ L ++ + +G+ + A TG+
Sbjct: 40 SEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGE 99
Query: 73 EVAIKIIDKTQLNPGS-LQKLFREVRIMKML-------------------------DHPN 106
+ + T+ P + ++++ EV +++L
Sbjct: 100 SFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKK 159
Query: 107 IVKLFQVIETE--KTLYLVMEYAS------GGEVFDYLVLHGRMKEKEARAKFRQIVSAV 158
++++ + + + G + + H + Q++ +
Sbjct: 160 MIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLL 219
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ- 217
H ++H L+ +++LD + + F S + PEL
Sbjct: 220 ASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL---VRDGARVVSSVSRGFEPPELEAR 276
Query: 218 ---------GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYM 268
+ D W+LG+++Y + LP E + R IP
Sbjct: 277 RATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKNIP--- 333
Query: 269 STDCENLLKKFLVLNPAKRASLE 291
LL+ FL R
Sbjct: 334 -QPVRALLEGFLRYPKEDRLLPL 355
Score = 128 bits (322), Expect = 3e-32
Identities = 16/122 (13%), Positives = 36/122 (29%), Gaps = 9/122 (7%)
Query: 486 TLYLVMEYAS------GGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLK 539
+ + + G + + H + Q++ + H ++H L+
Sbjct: 174 SRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLR 233
Query: 540 AENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNH 599
+++LD + + F S + PEL A ++ T
Sbjct: 234 PVDIVLDQRGGVFLTGFEHL---VRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLM 290
Query: 600 TH 601
T
Sbjct: 291 TF 292
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 252 bits (647), Expect = 1e-78
Identities = 66/286 (23%), Positives = 135/286 (47%), Gaps = 14/286 (4%)
Query: 19 SENNISSSRLMSSRRESSRRERDEPH---IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVA 75
E + + + + R + + +++ K IG+G F++V A + G VA
Sbjct: 2 DEQSQGMQGPPVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVA 61
Query: 76 IKIIDKTQL-NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFD 134
+K + L + + +E+ ++K L+HPN++K + + L +V+E A G++
Sbjct: 62 LKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSR 121
Query: 135 YLVLHGR----MKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFG 190
+ + + E+ F Q+ SA+++ H ++++HRD+K N+ + + +K+ D G
Sbjct: 122 MIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLG 181
Query: 191 FSNEFTPGN-KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS- 248
F+ + G+P Y +PE Y+ + D+WSLG +LY + + PF G
Sbjct: 182 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDK 240
Query: 249 -TLRELRERVLRGKY-RIPF-YMSTDCENLLKKFLVLNPAKRASLE 291
L L +++ + Y +P + S + L+ + +P KR +
Sbjct: 241 MNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVT 286
Score = 124 bits (313), Expect = 2e-31
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGR----MKEKEARAKFRQIVSAVQYCHQKKIIHR 536
+ L +V+E A G++ + + + E+ F Q+ SA+++ H ++++HR
Sbjct: 101 FIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHR 160
Query: 537 DLKAENLLLDSEMNIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQG 585
D+K N+ + + +K+ D G F+ + G+P Y +PE
Sbjct: 161 DIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE 210
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 252 bits (645), Expect = 1e-78
Identities = 80/275 (29%), Positives = 123/275 (44%), Gaps = 48/275 (17%)
Query: 34 ESSRRERDEPHIGKYKLL-KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKL 92
+S + + I YK+ + +G G KV + T ++ A+K++ K
Sbjct: 5 KSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-------KA 57
Query: 93 FREVRIM-KMLDHPNIVKLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGRMK--EK 145
REV + + P+IV++ V E K L +VME GGE+F + G E+
Sbjct: 58 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 117
Query: 146 EARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGNKLD 202
EA + I A+QY H I HRD+K ENLL S+ +K+ DFGF
Sbjct: 118 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF----------- 166
Query: 203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG----STLRELRERVL 258
A E G+KYD D+WSLGVI+Y L+ G PF + ++ R+
Sbjct: 167 ---------AKET-TGEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 215
Query: 259 RGKYRIPF----YMSTDCENLLKKFLVLNPAKRAS 289
G+Y P +S + + L++ L P +R +
Sbjct: 216 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT 250
Score = 118 bits (297), Expect = 2e-29
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 476 KLFQVIET----EKTLYLVMEYASGGEVFDYLVLHGRMK--EKEARAKFRQIVSAVQYCH 529
++ V E K L +VME GGE+F + G E+EA + I A+QY H
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 530 QKKIIHRDLKAENLLLDSE---MNIKIADFGFSNEFTPGN 566
I HRD+K ENLL S+ +K+ DFGF+ E T
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEK 174
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 253 bits (649), Expect = 2e-78
Identities = 94/285 (32%), Positives = 153/285 (53%), Gaps = 13/285 (4%)
Query: 11 GKSETGRGSENNISSSRLMSSRRESSRRERDEPHIGKYKL-----LKTIGKGNFAKVKLA 65
G + + S ++ +E ++ + P +L +KT+G G+F +V L
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 66 KHVPTGKEVAIKIIDKTQ-LNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVM 124
KH +G A+KI+DK + + ++ E RI++ ++ P +VKL + LY+VM
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 125 EYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIHRDLKAENLLLDSEM 182
EY +GGE+F +L GR E A+F QIV +Y H +I+RDLK ENLL+D +
Sbjct: 121 EYVAGGEMFSHLRRIGRFSE--PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
Query: 183 NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 242
I++ DFGF+ + T CG+P APE+ K Y VD W+LGV++Y + +G
Sbjct: 179 YIQVTDFGFAKRV--KGRTWTLCGTPEALAPEIILSKGY-NKAVDWWALGVLIYEMAAGY 235
Query: 243 LPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKR 287
PF ++ E+++ GK R P + S+D ++LL+ L ++ KR
Sbjct: 236 PPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Score = 127 bits (322), Expect = 2e-32
Identities = 45/115 (39%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 473 TLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQ 530
L F+ LY+VMEY +GGE+F +L GR E A+F QIV +Y H
Sbjct: 105 KLEFSFK---DNSNLYMVMEYVAGGEMFSHLRRIGRFSE--PHARFYAAQIVLTFEYLHS 159
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+I+RDLK ENLL+D + I++ DFGF+ + T CG+P APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWTLCGTPEALAPEIILS 212
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 251 bits (643), Expect = 5e-77
Identities = 80/249 (32%), Positives = 133/249 (53%), Gaps = 16/249 (6%)
Query: 50 LLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQ-LNPGSLQKLFREVRIMKMLDHPNIV 108
+L+ IGKG+F KV + + T K A+K ++K + + ++ +F+E++IM+ L+HP +V
Sbjct: 19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLV 78
Query: 109 KL---FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQ 163
L FQ E+ +++V++ GG++ +L + KE K ++V A+ Y
Sbjct: 79 NLWYSFQ---DEEDMFMVVDLLLGGDLRYHLQQNVHFKE--ETVKLFICELVMALDYLQN 133
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 223
++IIHRD+K +N+LLD ++ I DF + ++ T G+ PY APE+F +K G
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAG 193
Query: 224 --PEVDVWSLGVILYTLVSGSLPFDGST---LRELRERVLRGKYRIPFYMSTDCENLLKK 278
VD WSLGV Y L+ G P+ + +E+ P S + +LLKK
Sbjct: 194 YSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKK 253
Query: 279 FLVLNPAKR 287
L NP +R
Sbjct: 254 LLEPNPDQR 262
Score = 137 bits (346), Expect = 3e-35
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIH 535
FQ E+ +++V++ GG++ +L + KE K ++V A+ Y ++IIH
Sbjct: 84 FQ---DEEDMFMVVDLLLGGDLRYHLQQNVHFKE--ETVKLFICELVMALDYLQNQRIIH 138
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
RD+K +N+LLD ++ I DF + ++ T G+ PY APE+F
Sbjct: 139 RDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFS 187
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 252 bits (646), Expect = 6e-77
Identities = 60/279 (21%), Positives = 115/279 (41%), Gaps = 26/279 (9%)
Query: 30 SSRRESSRRERDEPHIGK--YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG 87
S ++ E +GK + +G G + + + + ++VA+K I
Sbjct: 6 SLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTI-VYRGMFDNRDVAVKRILPECF--- 61
Query: 88 SLQKLFREVRIMKMLD-HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRM-KEK 145
REV++++ D HPN+++ F + + Y+ +E + +Y+
Sbjct: 62 --SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGL 118
Query: 146 EARAKFRQIVSAVQYCHQKKIIHRDLKAENLLL-----DSEMNIKIADFGFSNEFTPG-- 198
E +Q S + + H I+HRDLK N+L+ ++ I+DFG + G
Sbjct: 119 EPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178
Query: 199 --NKLDTFCGSPPYAAPELFQGKKYD--GPEVDVWSLGVILYTLVS-GSLPFDGSTLREL 253
++ G+ + APE+ + VD++S G + Y ++S GS PF S R+
Sbjct: 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA 238
Query: 254 RERVLRGKY---RIPFYMSTDCENLLKKFLVLNPAKRAS 289
+ + L++K + ++P KR S
Sbjct: 239 NILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPS 277
Score = 133 bits (336), Expect = 1e-33
Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 11/130 (8%)
Query: 466 RASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRM-KEKEARAKFRQIVSA 524
R S +++ F + + Y+ +E + +Y+ E +Q S
Sbjct: 72 RESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLLQQTTSG 130
Query: 525 VQYCHQKKIIHRDLKAENLLL-----DSEMNIKIADFGFSNEFTPG----NKLDTFCGSP 575
+ + H I+HRDLK N+L+ ++ I+DFG + G ++ G+
Sbjct: 131 LAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 576 PYAAPELFQG 585
+ APE+
Sbjct: 191 GWIAPEMLSE 200
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 246 bits (630), Expect = 6e-76
Identities = 77/250 (30%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK-----LFREVRIMKML 102
+++L+T+G G+F +V L + G+ A+K++ K + ++ E ++ ++
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV----VRLKQVEHTNDERLMLSIV 63
Query: 103 DHPNIVKL---FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSA 157
HP I+++ FQ + ++++M+Y GGE+F L R AKF ++ A
Sbjct: 64 THPFIIRMWGTFQ---DAQQIFMIMDYIEGGELFSLLRKSQRFPN--PVAKFYAAEVCLA 118
Query: 158 VQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 217
++Y H K II+RDLK EN+LLD +IKI DFGF+ + T CG+P Y APE+
Sbjct: 119 LEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV--PDVTYTLCGTPDYIAPEVVS 176
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLK 277
K Y +D WS G+++Y +++G PF S + E++L + R P + + D ++LL
Sbjct: 177 TKPY-NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLS 235
Query: 278 KFLVLNPAKR 287
+ + + ++R
Sbjct: 236 RLITRDLSQR 245
Score = 129 bits (328), Expect = 2e-33
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIH 535
FQ + ++++M+Y GGE+F L R AKF ++ A++Y H K II+
Sbjct: 75 FQ---DAQQIFMIMDYIEGGELFSLLRKSQRFPN--PVAKFYAAEVCLALEYLHSKDIIY 129
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
RDLK EN+LLD +IKI DFGF+ + T CG+P Y APE+
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAKYV--PDVTYTLCGTPDYIAPEVVST 177
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 242 bits (620), Expect = 6e-75
Identities = 65/278 (23%), Positives = 114/278 (41%), Gaps = 35/278 (12%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD 103
++ ++ ++ +G+G F V AK+ AIK I + +K+ REV+ + L+
Sbjct: 3 YLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLE 61
Query: 104 HPNIVKLFQVIETE------------KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAK- 150
HP IV+ F + LY+ M+ + D++ ++E+E
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 151 --FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-------------NEF 195
F QI AV++ H K ++HRDLK N+ + +K+ DFG
Sbjct: 122 HIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 196 TPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLR-ELR 254
+ G+ Y +PE G Y +VD++SLG+IL+ L+ PF R
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYS-HKVDIFSLGLILFELLY---PFSTQMERVRTL 237
Query: 255 ERVLRGKY-RIPFYMSTDCENLLKKFLVLNPAKRASLE 291
V K+ + +++ L +P +R
Sbjct: 238 TDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAI 275
Score = 120 bits (302), Expect = 3e-30
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 16/120 (13%)
Query: 482 ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAK---FRQIVSAVQYCHQKKIIHRDL 538
+ LY+ M+ + D++ ++E+E F QI AV++ H K ++HRDL
Sbjct: 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDL 144
Query: 539 KAENLLLDSEMNIKIADFGFS-------------NEFTPGNKLDTFCGSPPYAAPELFQG 585
K N+ + +K+ DFG + G+ Y +PE G
Sbjct: 145 KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG 204
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 240 bits (615), Expect = 1e-73
Identities = 94/251 (37%), Positives = 139/251 (55%), Gaps = 21/251 (8%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK-----LFREVRIMKML 102
+ LK +GKG F KV L + TG+ A+KI+ K + + K E R+++
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVLQNT 62
Query: 103 DHPNIVKL---FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSA 157
HP + L FQ T L VMEYA+GGE+F +L E+ RA+F +IVSA
Sbjct: 63 RHPFLTALKYAFQ---THDRLCFVMEYANGGELFFHLSRERVFTEE--RARFYGAEIVSA 117
Query: 158 VQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELF 216
++Y H + +++RD+K ENL+LD + +IKI DFG E + G + TFCG+P Y APE+
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 177
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLL 276
+ Y G VD W LGV++Y ++ G LPF L E +L + R P +S + ++LL
Sbjct: 178 EDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLL 236
Query: 277 KKFLVLNPAKR 287
L +P +R
Sbjct: 237 AGLLKKDPKQR 247
Score = 130 bits (328), Expect = 2e-33
Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 8/111 (7%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIH 535
FQ T L VMEYA+GGE+F +L E+ RA+F +IVSA++Y H + +++
Sbjct: 74 FQ---THDRLCFVMEYANGGELFFHLSRERVFTEE--RARFYGAEIVSALEYLHSRDVVY 128
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQG 585
RD+K ENL+LD + +IKI DFG E + G + TFCG+P Y APE+ +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 179
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 238 bits (611), Expect = 4e-73
Identities = 91/250 (36%), Positives = 137/250 (54%), Gaps = 17/250 (6%)
Query: 49 KLLKTIGKGNFAKVKLAKHVP---TGKEVAIKIIDKTQL--NPGSLQKLFREVRIMKMLD 103
+LL+ +GKG + KV + V TGK A+K++ K + N E I++ +
Sbjct: 20 ELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK 79
Query: 104 HPNIVKL---FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAV 158
HP IV L FQ T LYL++EY SGGE+F L G E A F +I A+
Sbjct: 80 HPFIVDLIYAFQ---TGGKLYLILEYLSGGELFMQLEREGIFMED--TACFYLAEISMAL 134
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQ 217
+ HQK II+RDLK EN++L+ + ++K+ DFG E G TFCG+ Y APE+
Sbjct: 135 GHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM 194
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLK 277
+ VD WSLG ++Y +++G+ PF G ++ +++L+ K +P Y++ + +LLK
Sbjct: 195 RSGH-NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLK 253
Query: 278 KFLVLNPAKR 287
K L N A R
Sbjct: 254 KLLKRNAASR 263
Score = 128 bits (324), Expect = 8e-33
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIH 535
FQ T LYL++EY SGGE+F L G E A F +I A+ + HQK II+
Sbjct: 90 FQ---TGGKLYLILEYLSGGELFMQLEREGIFMED--TACFYLAEISMALGHLHQKGIIY 144
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQG 585
RDLK EN++L+ + ++K+ DFG E G TFCG+ Y APE+
Sbjct: 145 RDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMR 195
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 238 bits (609), Expect = 9e-73
Identities = 89/277 (32%), Positives = 145/277 (52%), Gaps = 19/277 (6%)
Query: 20 ENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVP---TGKEVAI 76
E +I + +E + +++LLK +G+G+F KV L K + + A+
Sbjct: 2 EGSIKEIAITHHVKEGHEKAD----PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAM 57
Query: 77 KIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL---FQVIETEKTLYLVMEYASGGEVF 133
K++ K L + E I+ ++HP IVKL FQ TE LYL++++ GG++F
Sbjct: 58 KVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQ---TEGKLYLILDFLRGGDLF 114
Query: 134 DYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF 191
L E+ KF ++ A+ + H II+RDLK EN+LLD E +IK+ DFG
Sbjct: 115 TRLSKEVMFTEE--DVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL 172
Query: 192 SNE-FTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTL 250
S E K +FCG+ Y APE+ + + D WS GV+++ +++G+LPF G
Sbjct: 173 SKESIDHEKKAYSFCGTVEYMAPEVVNRRGH-TQSADWWSFGVLMFEMLTGTLPFQGKDR 231
Query: 251 RELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKR 287
+E +L+ K +P ++S + ++LL+ NPA R
Sbjct: 232 KETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANR 268
Score = 128 bits (324), Expect = 7e-33
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIH 535
FQ TE LYL++++ GG++F L E+ KF ++ A+ + H II+
Sbjct: 95 FQ---TEGKLYLILDFLRGGDLFTRLSKEVMFTEE--DVKFYLAELALALDHLHSLGIIY 149
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQG 585
RDLK EN+LLD E +IK+ DFG S E K +FCG+ Y APE+
Sbjct: 150 RDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 239 bits (612), Expect = 1e-72
Identities = 92/291 (31%), Positives = 143/291 (49%), Gaps = 24/291 (8%)
Query: 11 GKSETGRGSENNISSSRLMSSRRESSRRERDEPHIG--KYKLLKTIGKGNFAKVKLAKHV 68
G S+ N + + + ++ + PH + LK IGKG+F KV LA+H
Sbjct: 1 GISQPQEPELMNANPAPPPAPSQQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHK 60
Query: 69 PTGKEVAIKIIDKTQLNPGSLQK-----LFREVRIM-KMLDHPNIVKL---FQVIETEKT 119
A+K++ K + L+K + E ++ K + HP +V L FQ T
Sbjct: 61 AEEVFYAVKVLQKKAI----LKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ---TADK 113
Query: 120 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIHRDLKAENLL 177
LY V++Y +GGE+F +L E RA+F +I SA+ Y H I++RDLK EN+L
Sbjct: 114 LYFVLDYINGGELFYHLQRERCFLEP--RARFYAAEIASALGYLHSLNIVYRDLKPENIL 171
Query: 178 LDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILY 236
LDS+ +I + DFG E + TFCG+P Y APE+ + Y VD W LG +LY
Sbjct: 172 LDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPY-DRTVDWWCLGAVLY 230
Query: 237 TLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKR 287
++ G PF E+ + +L ++ ++ +LL+ L + KR
Sbjct: 231 EMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKR 281
Score = 129 bits (326), Expect = 9e-33
Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 8/111 (7%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIH 535
FQ T LY V++Y +GGE+F +L E RA+F +I SA+ Y H I++
Sbjct: 108 FQ---TADKLYFVLDYINGGELFYHLQRERCFLEP--RARFYAAEIASALGYLHSLNIVY 162
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQG 585
RDLK EN+LLDS+ +I + DFG E + TFCG+P Y APE+
Sbjct: 163 RDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHK 213
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 235 bits (602), Expect = 1e-71
Identities = 89/252 (35%), Positives = 134/252 (53%), Gaps = 22/252 (8%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK-----LFREVRIMKM- 101
+ L K +GKG+F KV LA+ T + AIK + K + L E R++ +
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV----LMDDDVECTMVEKRVLSLA 74
Query: 102 LDHPNIVKL---FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVS 156
+HP + + FQ T++ L+ VMEY +GG++ ++ + RA F +I+
Sbjct: 75 WEHPFLTHMFCTFQ---TKENLFFVMEYLNGGDLMYHIQSCHKFDLS--RATFYAAEIIL 129
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPEL 215
+Q+ H K I++RDLK +N+LLD + +IKIADFG E K +TFCG+P Y APE+
Sbjct: 130 GLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEI 189
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENL 275
G+KY VD WS GV+LY ++ G PF G EL + P ++ + ++L
Sbjct: 190 LLGQKY-NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDL 248
Query: 276 LKKFLVLNPAKR 287
L K V P KR
Sbjct: 249 LVKLFVREPEKR 260
Score = 129 bits (327), Expect = 5e-33
Identities = 45/111 (40%), Positives = 67/111 (60%), Gaps = 8/111 (7%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIH 535
FQ T++ L+ VMEY +GG++ ++ + RA F +I+ +Q+ H K I++
Sbjct: 87 FQ---TKENLFFVMEYLNGGDLMYHIQSCHKFDLS--RATFYAAEIILGLQFLHSKGIVY 141
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
RDLK +N+LLD + +IKIADFG E K +TFCG+P Y APE+ G
Sbjct: 142 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLG 192
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 234 bits (599), Expect = 4e-71
Identities = 89/268 (33%), Positives = 136/268 (50%), Gaps = 18/268 (6%)
Query: 30 SSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSL 89
+ + + RD + + L +GKG+F KV L++ T + A+KI+ K + +
Sbjct: 4 TVSKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV----I 59
Query: 90 QK-----LFREVRIM-KMLDHPNIVKL---FQVIETEKTLYLVMEYASGGEVFDYLVLHG 140
Q E R++ P + +L FQ T LY VMEY +GG++ ++ G
Sbjct: 60 QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ---TMDRLYFVMEYVNGGDLMYHIQQVG 116
Query: 141 RMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGN 199
R KE A +I + + K II+RDLK +N++LDSE +IKIADFG E G
Sbjct: 117 RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 176
Query: 200 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLR 259
TFCG+P Y APE+ + Y G VD W+ GV+LY +++G PF+G EL + ++
Sbjct: 177 TTKTFCGTPDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235
Query: 260 GKYRIPFYMSTDCENLLKKFLVLNPAKR 287
P MS + + K + +P KR
Sbjct: 236 HNVAYPKSMSKEAVAICKGLMTKHPGKR 263
Score = 127 bits (322), Expect = 2e-32
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 537
FQ T LY VMEY +GG++ ++ GR KE A +I + + K II+RD
Sbjct: 90 FQ---TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 146
Query: 538 LKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQG 585
LK +N++LDSE +IKIADFG E G TFCG+P Y APE+
Sbjct: 147 LKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAY 195
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 233 bits (596), Expect = 1e-70
Identities = 94/270 (34%), Positives = 143/270 (52%), Gaps = 20/270 (7%)
Query: 30 SSRRESSRRERDEPHIG--KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG 87
SS+ + +G ++ ++ +GKG+F KV LA+ TG A+K++ K +
Sbjct: 5 SSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI--- 61
Query: 88 SLQK-----LFREVRIM-KMLDHPNIVKL---FQVIETEKTLYLVMEYASGGEVFDYLVL 138
LQ E RI+ +HP + +L FQ T L+ VME+ +GG++ ++
Sbjct: 62 -LQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ---TPDRLFFVMEFVNGGDLMFHIQK 117
Query: 139 HGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TP 197
R E AR +I+SA+ + H K II+RDLK +N+LLD E + K+ADFG E
Sbjct: 118 SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177
Query: 198 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERV 257
G TFCG+P Y APE+ Q Y GP VD W++GV+LY ++ G PF+ +L E +
Sbjct: 178 GVTTATFCGTPDYIAPEILQEMLY-GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI 236
Query: 258 LRGKYRIPFYMSTDCENLLKKFLVLNPAKR 287
L + P ++ D +LK F+ NP R
Sbjct: 237 LNDEVVYPTWLHEDATGILKSFMTKNPTMR 266
Score = 127 bits (322), Expect = 2e-32
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 537
FQ T L+ VME+ +GG++ ++ R E AR +I+SA+ + H K II+RD
Sbjct: 93 FQ---TPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRD 149
Query: 538 LKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
LK +N+LLD E + K+ADFG E G TFCG+P Y APE+ Q
Sbjct: 150 LKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQE 198
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 233 bits (595), Expect = 2e-70
Identities = 45/313 (14%), Positives = 94/313 (30%), Gaps = 45/313 (14%)
Query: 22 NISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK 81
++ + E++ K KL++ + G+ + V L + V ++ A+K+
Sbjct: 38 EAVTATVWPQNAETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTM 97
Query: 82 TQLNPGS-LQKLFREVRIMKMLDHPNIVKLFQVI-------------------------- 114
N S L++L L + +
Sbjct: 98 GAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDD 157
Query: 115 ETEKTLYLVMEYASG-----GEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKIIH 168
L+M AS D++ + + A Q++ K ++H
Sbjct: 158 YAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVH 217
Query: 169 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD-GPEVD 227
+NL + + + + D + G + YA E ++
Sbjct: 218 GHFTPDNLFIMPDGRLMLGDVSALWK--VGTRGPASSVPVTYAPREFLNASTATFTHALN 275
Query: 228 VWSLGVILYTLVSGSLPFDGST-----LRELRERVLRGKYRIPFY----MSTDCENLLKK 278
W LG+ +Y + LPF T + + G + F + + L+ +
Sbjct: 276 AWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGR 335
Query: 279 FLVLNPAKRASLE 291
FL + +R
Sbjct: 336 FLNFDRRRRLLPL 348
Score = 115 bits (288), Expect = 7e-28
Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 8/107 (7%)
Query: 487 LYLVMEYASG-----GEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKIIHRDLKA 540
L+M AS D++ + + A Q++ K ++H
Sbjct: 163 YLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTP 222
Query: 541 ENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGA 587
+NL + + + + D + G + YA E
Sbjct: 223 DNLFIMPDGRLMLGDVSALWK--VGTRGPASSVPVTYAPREFLNAST 267
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 235 bits (601), Expect = 3e-70
Identities = 99/291 (34%), Positives = 148/291 (50%), Gaps = 26/291 (8%)
Query: 21 NNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIID 80
+ S + S + + + +++ LK +GKG F KV L K TG+ A+KI+
Sbjct: 123 GSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK 182
Query: 81 KTQLNPGSLQK-----LFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDY 135
K + + K E R+++ HP + L +T L VMEYA+GGE+F +
Sbjct: 183 KEVI----VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFH 238
Query: 136 LVLHGRMKEKEARAKF--RQIVSAVQYCHQKK-IIHRDLKAENLLLDSEMNIKIADFGFS 192
L E RA+F +IVSA+ Y H +K +++RDLK ENL+LD + +IKI DFG
Sbjct: 239 LSRERVFSED--RARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC 296
Query: 193 NE-FTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLR 251
E G + TFCG+P Y APE+ + Y G VD W LGV++Y ++ G LPF
Sbjct: 297 KEGIKDGATMKTFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHE 355
Query: 252 ELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRASLEVSGEVTLGGAP 302
+L E +L + R P + + ++LL L +P +R LGG
Sbjct: 356 KLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQR----------LGGGS 396
Score = 124 bits (312), Expect = 2e-30
Identities = 51/116 (43%), Positives = 69/116 (59%), Gaps = 6/116 (5%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQK 531
L L +T L VMEYA+GGE+F +L E RA+F +IVSA+ Y H +
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED--RARFYGAEIVSALDYLHSE 267
Query: 532 K-IIHRDLKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQG 585
K +++RDLK ENL+LD + +IKI DFG E G + TFCG+P Y APE+ +
Sbjct: 268 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED 323
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 231 bits (592), Expect = 2e-69
Identities = 84/292 (28%), Positives = 142/292 (48%), Gaps = 32/292 (10%)
Query: 21 NNISSSRLMSSRRESSRRERDEPHIGKYK----------LLKTIGKGNFAKVKLAKHVPT 70
++ L ++ + R + I K + ++K IG+G F +V+L +H T
Sbjct: 34 YDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKST 93
Query: 71 GKEVAIKIIDKTQLNPGSLQKLFR-EVRIMKMLDHPNIVKL---FQVIETEKTLYLVMEY 126
K A+K++ K ++ S F E IM + P +V+L FQ ++ LY+VMEY
Sbjct: 94 RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ---DDRYLYMVMEY 150
Query: 127 ASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI 184
GG++ + + E A+F ++V A+ H IHRD+K +N+LLD ++
Sbjct: 151 MPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL 207
Query: 185 KIADFGFSNEFTPGNKL--DTFCGSPPYAAPELFQGKKYD---GPEVDVWSLGVILYTLV 239
K+ADFG + + DT G+P Y +PE+ + + D G E D WS+GV LY ++
Sbjct: 208 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267
Query: 240 SGSLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLKKFLVLNPAKR 287
G PF +L +++ K + F +S + +NL+ FL + R
Sbjct: 268 VGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVR 318
Score = 124 bits (312), Expect = 1e-30
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 10/112 (8%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIH 535
FQ ++ LY+VMEY GG++ + + E A+F ++V A+ H IH
Sbjct: 138 FQ---DDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDAIHSMGFIH 191
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL--DTFCGSPPYAAPELFQG 585
RD+K +N+LLD ++K+ADFG + + DT G+P Y +PE+ +
Sbjct: 192 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 243
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 229 bits (586), Expect = 3e-69
Identities = 87/256 (33%), Positives = 145/256 (56%), Gaps = 21/256 (8%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK-----LFREVRIM-KM 101
+ LL+ IG+G++AKV L + T + A+K++ K + + E + +
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV----NDDEDIDWVQTEKHVFEQA 66
Query: 102 LDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 161
+HP +V L +TE L+ V+EY +GG++ ++ ++ E+ AR +I A+ Y
Sbjct: 67 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 126
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKK 220
H++ II+RDLK +N+LLDSE +IK+ D+G E PG+ TFCG+P Y APE+ +G+
Sbjct: 127 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED 186
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPF---------DGSTLRELRERVLRGKYRIPFYMSTD 271
Y G VD W+LGV+++ +++G PF D +T L + +L + RIP +S
Sbjct: 187 Y-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVK 245
Query: 272 CENLLKKFLVLNPAKR 287
++LK FL +P +R
Sbjct: 246 AASVLKSFLNKDPKER 261
Score = 130 bits (330), Expect = 1e-33
Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 4/109 (3%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 537
FQ TE L+ V+EY +GG++ ++ ++ E+ AR +I A+ Y H++ II+RD
Sbjct: 79 FQ---TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 135
Query: 538 LKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
LK +N+LLDSE +IK+ D+G E PG+ TFCG+P Y APE+ +G
Sbjct: 136 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG 184
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 229 bits (585), Expect = 5e-69
Identities = 89/297 (29%), Positives = 156/297 (52%), Gaps = 33/297 (11%)
Query: 13 SETGRGSENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVP--- 69
++ G G E ++ + + + E+ ++LLK +G G + KV L + +
Sbjct: 23 ADGGDGGEQLLTVKHELRTANLTGHAEKVGIE--NFELLKVLGTGAYGKVFLVRKISGHD 80
Query: 70 TGKEVAIKIIDKTQLNPGSLQKL------FREVRIMKMLDH-PNIVKL---FQVIETEKT 119
TGK A+K++ K + +QK E ++++ + P +V L FQ TE
Sbjct: 81 TGKLYAMKVLKKATI----VQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ---TETK 133
Query: 120 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIHRDLKAENLL 177
L+L+++Y +GGE+F +L R E + +IV A+++ H+ II+RD+K EN+L
Sbjct: 134 LHLILDYINGGELFTHLSQRERFTEH--EVQIYVGEIVLALEHLHKLGIIYRDIKLENIL 191
Query: 178 LDSEMNIKIADFGFSNEF--TPGNKLDTFCGSPPYAAPELFQGKKY-DGPEVDVWSLGVI 234
LDS ++ + DFG S EF + FCG+ Y AP++ +G VD WSLGV+
Sbjct: 192 LDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVL 251
Query: 235 LYTLVSGSLPFDG----STLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKR 287
+Y L++G+ PF ++ E+ R+L+ + P MS ++L+++ L+ +P KR
Sbjct: 252 MYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 308
Score = 128 bits (324), Expect = 1e-32
Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 9/112 (8%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIH 535
FQ TE L+L+++Y +GGE+F +L R E + +IV A+++ H+ II+
Sbjct: 128 FQ---TETKLHLILDYINGGELFTHLSQRERFTEH--EVQIYVGEIVLALEHLHKLGIIY 182
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEF--TPGNKLDTFCGSPPYAAPELFQG 585
RD+K EN+LLDS ++ + DFG S EF + FCG+ Y AP++ +G
Sbjct: 183 RDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 234
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 229 bits (586), Expect = 1e-68
Identities = 89/301 (29%), Positives = 157/301 (52%), Gaps = 21/301 (6%)
Query: 3 DKSFRYSTGKSETGRGSENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKV 62
+ T ++ +G+ + + S + + + LL+ IG+G++AKV
Sbjct: 9 HHDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKV 68
Query: 63 KLAKHVPTGKEVAIKIIDKTQLNPGSLQK-----LFREVRIM-KMLDHPNIVKLFQVIET 116
L + T + A++++ K + + E + + +HP +V L +T
Sbjct: 69 LLVRLKKTDRIYAMRVVKKELV----NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT 124
Query: 117 EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 176
E L+ V+EY +GG++ ++ ++ E+ AR +I A+ Y H++ II+RDLK +N+
Sbjct: 125 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNV 184
Query: 177 LLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 235
LLDSE +IK+ D+G E PG+ TFCG+P Y APE+ +G+ Y G VD W+LGV++
Sbjct: 185 LLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY-GFSVDWWALGVLM 243
Query: 236 YTLVSGSLPF---------DGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAK 286
+ +++G PF D +T L + +L + RIP +S ++LK FL +P +
Sbjct: 244 FEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKE 303
Query: 287 R 287
R
Sbjct: 304 R 304
Score = 130 bits (329), Expect = 5e-33
Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 4/109 (3%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 537
FQ TE L+ V+EY +GG++ ++ ++ E+ AR +I A+ Y H++ II+RD
Sbjct: 122 FQ---TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 178
Query: 538 LKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
LK +N+LLDSE +IK+ D+G E PG+ TFCG+P Y APE+ +G
Sbjct: 179 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG 227
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 234 bits (599), Expect = 1e-68
Identities = 68/251 (27%), Positives = 123/251 (49%), Gaps = 16/251 (6%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK-----LFREVRIMKML 102
++ + +GKG F +V + TGK A K ++K ++ ++ E +I++ +
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI----KKRKGEAMALNEKQILEKV 241
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQY 160
+ +V L ET+ L LV+ +GG++ ++ G+ EARA F +I ++
Sbjct: 242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLED 301
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H+++I++RDLK EN+LLD +I+I+D G + G + G+ Y APE+ + ++
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNER 361
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDG----STLRELRERVLRGKYRIPFYMSTDCENLL 276
Y D W+LG +LY +++G PF E+ V S +L
Sbjct: 362 Y-TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLC 420
Query: 277 KKFLVLNPAKR 287
+ L +PA+R
Sbjct: 421 SQLLCKDPAER 431
Score = 131 bits (331), Expect = 2e-32
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQK 531
++ L ET+ L LV+ +GG++ ++ G+ EARA F +I ++ H++
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+I++RDLK EN+LLD +I+I+D G + G + G+ Y APE+ +
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN 359
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 229 bits (585), Expect = 2e-68
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 28/294 (9%)
Query: 20 ENNISSSRLMSSRRESSRRERDEPHIGKYK----------LLKTIGKGNFAKVKLAKHVP 69
+ +S L + + + EP + + K +LK IG+G F++V + K
Sbjct: 25 HQELGASELAQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQ 84
Query: 70 TGKEVAIKIIDKTQLNPGSLQKLFR-EVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYAS 128
TG+ A+KI++K + FR E ++ D I +L + E LYLVMEY
Sbjct: 85 TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYV 144
Query: 129 GGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKI 186
GG++ L G + A+F +IV A+ H+ +HRD+K +N+LLD +I++
Sbjct: 145 GGDLLTLLSKFGE-RIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRL 203
Query: 187 ADFGFSNEFTPGNKL--DTFCGSPPYAAPELFQGKKYD------GPEVDVWSLGVILYTL 238
ADFG + + G+P Y +PE+ Q GPE D W+LGV Y +
Sbjct: 204 ADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEM 263
Query: 239 VSGSLPFDGSTLRELRERVLRGKYRIPF-----YMSTDCENLLKKFLVLNPAKR 287
G PF + E +++ K + + + + +++ L P R
Sbjct: 264 FYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETR 316
Score = 124 bits (313), Expect = 8e-31
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIH 535
FQ E LYLVMEY GG++ L G + A+F +IV A+ H+ +H
Sbjct: 130 FQ---DENYLYLVMEYYVGGDLLTLLSKFGE-RIPAEMARFYLAEIVMAIDSVHRLGYVH 185
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKL--DTFCGSPPYAAPELFQGGAPVTSSG 593
RD+K +N+LLD +I++ADFG + + G+P Y +PE+ Q +G
Sbjct: 186 RDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTG 245
Query: 594 GAG 596
G
Sbjct: 246 SYG 248
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 226 bits (578), Expect = 5e-68
Identities = 41/268 (15%), Positives = 89/268 (33%), Gaps = 33/268 (12%)
Query: 47 KYKLLKTIGKGNFAKVKLAKH-----VPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKM 101
+ +G+G FA+V A ++ +K+ NP + + +K
Sbjct: 66 LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKP 123
Query: 102 LDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-----MKEKEARAKFRQIVS 156
+K + + LV E S G + + + L+ M + + +++
Sbjct: 124 SMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLY 183
Query: 157 AVQYCHQKKIIHRDLKAENLLL-----------DSEMNIKIADFGFS---NEFTPGNKLD 202
++ H +IIH D+K +N +L D + + D G S F G
Sbjct: 184 MIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFT 243
Query: 203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGSTLRELRERVLRGK 261
C + + E+ K ++ ++D + + +Y ++ G+ E + R
Sbjct: 244 AKCETSGFQCVEMLSNKPWN-YQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRL 302
Query: 262 YRIPFYMSTDCENLLKKFLVLNPAKRAS 289
+ + L +
Sbjct: 303 PHLDMW-----NEFFHVMLNIPDCHHLP 325
Score = 127 bits (319), Expect = 5e-32
Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 19/131 (14%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-----MKEKEARAKFRQIVSAVQYC 528
+K + + LV E S G + + + L+ M + + +++ ++
Sbjct: 129 FMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV 188
Query: 529 HQKKIIHRDLKAENLLL-----------DSEMNIKIADFGFS---NEFTPGNKLDTFCGS 574
H +IIH D+K +N +L D + + D G S F G C +
Sbjct: 189 HDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCET 248
Query: 575 PPYAAPELFQG 585
+ E+
Sbjct: 249 SGFQCVEMLSN 259
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 230 bits (589), Expect = 1e-67
Identities = 79/253 (31%), Positives = 127/253 (50%), Gaps = 19/253 (7%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK-----LFREVRIMKMLD 103
+ +G+G F +V + TGK A K ++K +L ++ E +I+ +
Sbjct: 188 LDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL----KKRKGYQGAMVEKKILAKVH 243
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKF--RQIVSAVQ 159
IV L ET+ L LVM +GG++ ++ +E RA F QIVS ++
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 218
+ HQ+ II+RDLK EN+LLD + N++I+D G + E K + G+P + APEL G
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDG----STLRELRERVLRGKYRIPFYMSTDCEN 274
++Y VD ++LGV LY +++ PF +EL++RVL P S ++
Sbjct: 364 EEY-DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKD 422
Query: 275 LLKKFLVLNPAKR 287
+ L +P KR
Sbjct: 423 FCEALLQKDPEKR 435
Score = 125 bits (315), Expect = 2e-30
Identities = 43/117 (36%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE--KEARAKF--RQIVSAVQYCH 529
++ L ET+ L LVM +GG++ ++ +E RA F QIVS +++ H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-TPGNKLDTFCGSPPYAAPELFQG 585
Q+ II+RDLK EN+LLD + N++I+D G + E K + G+P + APEL G
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 233 bits (596), Expect = 2e-67
Identities = 87/276 (31%), Positives = 136/276 (49%), Gaps = 12/276 (4%)
Query: 19 SENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKI 78
+ + + RD + + L +GKG+F KV L++ T + A+KI
Sbjct: 314 GTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKI 373
Query: 79 IDKTQLNPGSLQK-----LFREVRIMKM-LDHPNIVKLFQVIETEKTLYLVMEYASGGEV 132
+ K + +Q E R++ + P + +L +T LY VMEY +GG++
Sbjct: 374 LKKDVV----IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL 429
Query: 133 FDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 192
++ GR KE A +I + + K II+RDLK +N++LDSE +IKIADFG
Sbjct: 430 MYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMC 489
Query: 193 NE-FTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLR 251
E G TFCG+P Y APE+ + Y G VD W+ GV+LY +++G PF+G
Sbjct: 490 KENIWDGVTTKTFCGTPDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDED 548
Query: 252 ELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKR 287
EL + ++ P MS + + K + +P KR
Sbjct: 549 ELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKR 584
Score = 127 bits (321), Expect = 8e-31
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 537
FQ T LY VMEY +GG++ ++ GR KE A +I + + K II+RD
Sbjct: 411 FQ---TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 467
Query: 538 LKAENLLLDSEMNIKIADFGFSNE-FTPGNKLDTFCGSPPYAAPELFQG 585
LK +N++LDSE +IKIADFG E G TFCG+P Y APE+
Sbjct: 468 LKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAY 516
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 225 bits (575), Expect = 1e-66
Identities = 83/290 (28%), Positives = 138/290 (47%), Gaps = 30/290 (10%)
Query: 24 SSSRLMSSRRESSRRERDEPHIGKYK----------LLKTIGKGNFAKVKLAKHVPTGKE 73
++S L + E +P K K +LK IG+G F +V + K K
Sbjct: 42 NNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKV 101
Query: 74 VAIKIIDKTQLNPGSLQKLFR-EVRIMKMLDHPNIVKL---FQVIETEKTLYLVMEYASG 129
A+KI++K ++ + FR E ++ D I L FQ + LYLVM+Y G
Sbjct: 102 FAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ---DDNNLYLVMDYYVG 158
Query: 130 GEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIAD 188
G++ L R+ E+ AR ++V A+ HQ +HRD+K +N+L+D +I++AD
Sbjct: 159 GDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLAD 218
Query: 189 FGFSNEFTPGNKL--DTFCGSPPYAAPELFQGKKYD----GPEVDVWSLGVILYTLVSGS 242
FG + + G+P Y +PE+ Q + GPE D WSLGV +Y ++ G
Sbjct: 219 FGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
Query: 243 LPFDGSTLRELRERVLRGKYRIPF-----YMSTDCENLLKKFLVLNPAKR 287
PF +L E +++ K R F +S + ++L+++ + + R
Sbjct: 279 TPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLIC-SREHR 327
Score = 122 bits (307), Expect = 6e-30
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLV-LHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 536
FQ + LYLVM+Y GG++ L R+ E+ AR ++V A+ HQ +HR
Sbjct: 143 FQ---DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHR 199
Query: 537 DLKAENLLLDSEMNIKIADFGFSNEFTPGNKL--DTFCGSPPYAAPELFQG 585
D+K +N+L+D +I++ADFG + + G+P Y +PE+ Q
Sbjct: 200 DIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 215 bits (548), Expect = 4e-63
Identities = 42/326 (12%), Positives = 92/326 (28%), Gaps = 47/326 (14%)
Query: 9 STGKSETGRGSENNISSSRLMSSRRESSRRERDEPHIGKYKLL---KTIGKGNFAKVKLA 65
T ++ S S + + + L +G+ + A
Sbjct: 38 QANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEA 97
Query: 66 KHVPTGKEVAIKIIDKTQLNPGS-LQKLFREVRIMK----------------------ML 102
TG+ + + T+ P + ++++ EV ++ ++
Sbjct: 98 TDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157
Query: 103 DHPNIVKLFQVIETEK-----TLYLVMEYASG------GEVFDYLVLHGRMKEKEARAKF 151
P K+ +V E+ + + + + + H +
Sbjct: 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLT 217
Query: 152 RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT--FCGSPP 209
Q++ + H ++H L+ +++LD + + F P
Sbjct: 218 LQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPE 277
Query: 210 YAAPELFQGKKYD----GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP 265
A + ++ D W+LG+ +Y + LP E + R IP
Sbjct: 278 TTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIP 337
Query: 266 FYMSTDCENLLKKFLVLNPAKRASLE 291
LL+ FL R
Sbjct: 338 ----QPVRALLEGFLRYPKEDRLLPL 359
Score = 100 bits (250), Expect = 8e-23
Identities = 11/118 (9%), Positives = 30/118 (25%), Gaps = 8/118 (6%)
Query: 486 TLYLVMEYASG------GEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLK 539
+ + + + + H + Q++ + H ++H L+
Sbjct: 179 SRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLR 238
Query: 540 AENLLLDSEMNIKIADFGFSNEFTPGNKLDT--FCGSPPYAAPELFQGGAPVTSSGGA 595
+++LD + + F P A + G +
Sbjct: 239 PVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTF 296
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 210 bits (537), Expect = 7e-63
Identities = 62/269 (23%), Positives = 103/269 (38%), Gaps = 33/269 (12%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIM-KMLDHP 105
++ L+ IG G F V G AIK K Q REV + H
Sbjct: 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS 71
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR----MKEKEARAKFRQIVSAVQYC 161
++V+ F + + + EY +GG + D + + R KE E + Q+ ++Y
Sbjct: 72 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131
Query: 162 HQKKIIHRDLKAENLLLDSEMNI-------------------KIADFGFSNEFTPGNKLD 202
H ++H D+K N+ + KI D G T +
Sbjct: 132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV---TRISSPQ 188
Query: 203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS-LPFDGSTLRELRERVLRGK 261
G + A E+ Q P+ D+++L + + LP +G E+R +G+
Sbjct: 189 VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIR----QGR 244
Query: 262 Y-RIPFYMSTDCENLLKKFLVLNPAKRAS 289
RIP +S + LLK + +P +R S
Sbjct: 245 LPRIPQVLSQEFTELLKVMIHPDPERRPS 273
Score = 103 bits (259), Expect = 1e-24
Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 26/130 (20%)
Query: 482 ETEKTLYLVMEYASGGEVFDYLVLHGR----MKEKEARAKFRQIVSAVQYCHQKKIIHRD 537
+ + + EY +GG + D + + R KE E + Q+ ++Y H ++H D
Sbjct: 81 AEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMD 140
Query: 538 LKAENLLLDSEMNI-------------------KIADFGFSNEFTPGNKLDTFCGSPPYA 578
+K N+ + KI D G T + G +
Sbjct: 141 IKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV---TRISSPQVEEGDSRFL 197
Query: 579 APELFQGGAP 588
A E+ Q
Sbjct: 198 ANEVLQENYT 207
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 220 bits (563), Expect = 1e-62
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 16/250 (6%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQK-----LFREVRI---MK 100
+ + IG+G F +V + TGK A+K +DK ++ K E + +
Sbjct: 192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI----KMKQGETLALNERIMLSLVS 247
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
D P IV + T L +++ +GG++ +L HG E + R +I+ +++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H + +++RDLK N+LLD +++I+D G + +F K G+ Y APE+ Q
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGV 366
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGSTLR---ELRERVLRGKYRIPFYMSTDCENLLK 277
D +SLG +L+ L+ G PF + E+ L +P S + +LL+
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 278 KFLVLNPAKR 287
L + +R
Sbjct: 427 GLLQRDVNRR 436
Score = 126 bits (317), Expect = 3e-30
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++ + T L +++ +GG++ +L HG E + R +I+ +++ H + +
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSS 592
++RDLK N+LLD +++I+D G + +F K G+ Y APE+ Q G SS
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSS 371
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 206 bits (526), Expect = 4e-61
Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 11/247 (4%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ + IG G+F V A+ G +VA+KI+ + + + + REV IMK L HPNIV
Sbjct: 40 NIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR---QIVSAVQYCHQKK 165
+ L +V EY S G ++ L G ++ + R + + + Y H +
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 166 --IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT-FCGSPPYAAPELFQGKKYD 222
I+HR+LK+ NLL+D + +K+ DFG S G+P + APE+ + + +
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 223 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR--IPFYMSTDCENLLKKFL 280
+ DV+S GVIL+ L + P+ ++ V R IP ++ +++
Sbjct: 218 -EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCW 276
Query: 281 VLNPAKR 287
P KR
Sbjct: 277 TNEPWKR 283
Score = 103 bits (259), Expect = 2e-24
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR---QIVSAVQYCHQKK--IIHRDLKAE 541
L +V EY S G ++ L G ++ + R + + + Y H + I+HR+LK+
Sbjct: 109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSP 168
Query: 542 NLLLDSEMNIKIADFGFSNEFTPGNKLDT-FCGSPPYAAPELFQG 585
NLL+D + +K+ DFG S G+P + APE+ +
Sbjct: 169 NLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRD 213
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 199 bits (508), Expect = 8e-59
Identities = 68/277 (24%), Positives = 121/277 (43%), Gaps = 20/277 (7%)
Query: 30 SSRRESSRRERDEPHI------GKY-KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT 82
++ E E G++ K IG+G+F V T EVA +
Sbjct: 3 ERNQQQDDIEELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDR 62
Query: 83 QLNPGSLQKLFREVRIMKMLDHPNIVKLF----QVIETEKTLYLVMEYASGGEVFDYLVL 138
+L Q+ E ++K L HPNIV+ + ++ +K + LV E + G + YL
Sbjct: 63 KLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR 122
Query: 139 HGRMKEKEARAKFRQIVSAVQYCHQKK--IIHRDLKAENLLLDSEM-NIKIADFGFSNEF 195
MK K R+ RQI+ +Q+ H + IIHRDLK +N+ + ++KI D G +
Sbjct: 123 FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA-TL 181
Query: 196 TPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGSTLRELR 254
+ G+P + APE+++ K VDV++ G+ + + + P+ + ++
Sbjct: 182 KRASFAKAVIGTPEFMAPEMYEEK--YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY 239
Query: 255 ERVLRGK--YRIPFYMSTDCENLLKKFLVLNPAKRAS 289
RV G + + +++ + N +R S
Sbjct: 240 RRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYS 276
Score = 104 bits (261), Expect = 6e-25
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 482 ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKK--IIHRDLK 539
+ +K + LV E + G + YL MK K R+ RQI+ +Q+ H + IIHRDLK
Sbjct: 99 KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK 158
Query: 540 AENLLLDSEM-NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGG 586
+N+ + ++KI D G + + G+P + APE+++
Sbjct: 159 CDNIFITGPTGSVKIGDLGLA-TLKRASFAKAVIGTPEFMAPEMYEEK 205
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 196 bits (500), Expect = 6e-58
Identities = 77/255 (30%), Positives = 119/255 (46%), Gaps = 22/255 (8%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQKLFREVRIMKMLDHPN 106
L + IG G F KV A G EVA+K D + +++ + +E ++ ML HPN
Sbjct: 10 TLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 165
I+ L V E L LVME+A GG + L G+ + + QI + Y H +
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRV--LSGKRIPPDILVNWAVQIARGMNYLHDEA 125
Query: 166 ---IIHRDLKAENLLLDSEM--------NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 214
IIHRDLK+ N+L+ ++ +KI DFG + E+ K+ + G+ + APE
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM-SAAGAYAWMAPE 184
Query: 215 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR--IPFYMSTDC 272
+ + + DVWS GV+L+ L++G +PF G + V K IP
Sbjct: 185 VIRASMFS-KGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPF 243
Query: 273 ENLLKKFLVLNPAKR 287
L++ +P R
Sbjct: 244 AKLMEDCWNPDPHSR 258
Score = 100 bits (252), Expect = 8e-24
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 15/124 (12%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
++ L V E L LVME+A GG + L G+ + + QI + Y H +
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNWAVQIARGMNYLHDEA 125
Query: 533 ---IIHRDLKAENLLLDSEM--------NIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
IIHRDLK+ N+L+ ++ +KI DFG + E+ K+ + G+ + APE
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM-SAAGAYAWMAPE 184
Query: 582 LFQG 585
+ +
Sbjct: 185 VIRA 188
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 193 bits (493), Expect = 7e-57
Identities = 48/249 (19%), Positives = 104/249 (41%), Gaps = 16/249 (6%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
L + + + ++ + G ++ +K++ + + E +++ HPN++
Sbjct: 13 NFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVL 70
Query: 109 KLFQVIET--EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARA-KF-RQIVSAVQYCHQK 164
+ ++ L+ + G +++ L +++A KF + + + H
Sbjct: 71 PVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL 130
Query: 165 K--IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYD 222
+ I L + ++++D +M +I+ F + +P + APE Q K D
Sbjct: 131 EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR----MYAPAWVAPEALQKKPED 186
Query: 223 GPE--VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYR--IPFYMSTDCENLLKK 278
D+WS V+L+ LV+ +PF + E+ +V R IP +S L+K
Sbjct: 187 TNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKI 246
Query: 279 FLVLNPAKR 287
+ +PAKR
Sbjct: 247 CMNEDPAKR 255
Score = 99.6 bits (249), Expect = 2e-23
Identities = 18/106 (16%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 484 EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARA-KF-RQIVSAVQYCHQKK--IIHRDLK 539
L+ + G +++ L +++A KF + + + H + I L
Sbjct: 81 APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALN 140
Query: 540 AENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+ ++++D +M +I+ F + +P + APE Q
Sbjct: 141 SRSVMIDEDMTARISMADVKFSFQSPGR----MYAPAWVAPEALQK 182
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 193 bits (492), Expect = 2e-56
Identities = 71/260 (27%), Positives = 116/260 (44%), Gaps = 28/260 (10%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGS-----LQKLFREVRIMKMLD 103
+ K IGKG F V + V VAIK + + Q+ REV IM L+
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR---QIVSAVQY 160
HPNIVKL+ + +VME+ G+++ L + + K R I ++Y
Sbjct: 82 HPNIVKLYGL--MHNPPRMVMEFVPCGDLYHR--LLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 161 CHQKK--IIHRDLKAENLLLDS-----EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
+ I+HRDL++ N+ L S + K+ADFG S + + + G+ + AP
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV--HSVSGLLGNFQWMAP 195
Query: 214 ELFQG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELR--ERVLRGKYR--IPFY 267
E + Y + D +S +ILYT+++G PFD + +++ + R IP
Sbjct: 196 ETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPED 254
Query: 268 MSTDCENLLKKFLVLNPAKR 287
N+++ +P KR
Sbjct: 255 CPPRLRNVIELCWSGDPKKR 274
Score = 97.8 bits (244), Expect = 1e-22
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR---QIVSAVQYCHQKK--IIHRDLK 539
+VME+ G+++ L + + K R I ++Y + I+HRDL+
Sbjct: 94 NPPRMVMEFVPCGDLYHRL--LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLR 151
Query: 540 AENLLLDS-----EMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
+ N+ L S + K+ADFG S + + + G+ + APE
Sbjct: 152 SPNIFLQSLDENAPVCAKVADFGLSQQSV--HSVSGLLGNFQWMAPETIGA 200
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 194 bits (494), Expect = 2e-56
Identities = 67/292 (22%), Positives = 117/292 (40%), Gaps = 27/292 (9%)
Query: 18 GSENNIS--SSRLMSSRRESSRRERDEPHI--GKYKLLKTIGKGNFAKVKLAKHVPTGKE 73
G E N+S S+R + + E I + ++ + IGKG F +V + E
Sbjct: 1 GPEMNLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRW---HGE 57
Query: 74 VAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVF 133
VAI++ID + N L+ REV + H N+V + L ++ G ++
Sbjct: 58 VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLY 117
Query: 134 DYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 192
+ + + + ++IV + Y H K I+H+DLK++N+ D + I DFG
Sbjct: 118 SVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLF 176
Query: 193 NEFTP------GNKLDTFCGSPPYAAPELFQGKKYDGPE--------VDVWSLGVILYTL 238
+ +KL G + APE+ + D E DV++LG I Y L
Sbjct: 177 SISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
Query: 239 VSGSLPFDGSTLRELRERVLRGKYR---IPFYMSTDCENLLKKFLVLNPAKR 287
+ PF + ++ G + M + ++L +R
Sbjct: 237 HAREWPFKTQPAEAIIWQMGTG-MKPNLSQIGMGKEISDILLFCWAFEQEER 287
Score = 103 bits (258), Expect = 3e-24
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKIIHRDLKAENLLL 545
L ++ G ++ + + + + ++IV + Y H K I+H+DLK++N+
Sbjct: 104 LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY 163
Query: 546 DSEMNIKIADFGFSNEFTP------GNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGTNH 599
D + I DFG + +KL G + APE+ + +P T +
Sbjct: 164 D-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSK 222
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 192 bits (489), Expect = 7e-56
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 19/274 (6%)
Query: 24 SSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQ 83
+ S + S + D P + L+ IGKG+F +V T K VAIKIID +
Sbjct: 2 AHSPVQSGLPGMQNLKAD-PE-ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE 59
Query: 84 LNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMK 143
++ + +E+ ++ D P + K + + L+++MEY GG D L+ G +
Sbjct: 60 AED-EIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLD 117
Query: 144 EKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLD 202
E + R+I+ + Y H +K IHRD+KA N+LL +K+ADFG + + T K +
Sbjct: 118 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 177
Query: 203 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGSTLREL----RER- 256
TF G+P + APE+ + YD + D+WSLG+ L G P + ++ L +
Sbjct: 178 TFVGTPFWMAPEVIKQSAYD-SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP 236
Query: 257 -VLRGKYRIPFYMSTDCENLLKKFLVLNPAKRAS 289
L G Y S + ++ L P+ R +
Sbjct: 237 PTLEGNY------SKPLKEFVEACLNKEPSFRPT 264
Score = 100 bits (250), Expect = 2e-23
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 484 EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ L+++MEY GG D L+ G + E + R+I+ + Y H +K IHRD+KA N+
Sbjct: 92 DTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANV 150
Query: 544 LLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPELFQGG 586
LL +K+ADFG + + T K +TF G+P + APE+ +
Sbjct: 151 LLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 194
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 191 bits (487), Expect = 2e-55
Identities = 69/254 (27%), Positives = 133/254 (52%), Gaps = 22/254 (8%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
IG+G+ V LA+ +G++VA+K++D + + LF EV IM+ H N
Sbjct: 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHFN 103
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
+V++++ + L+++ME+ GG + D +V R+ E++ ++ A+ Y H + +
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGV 162
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPG-NKLDTFCGSPPYAAPELFQGKKYDGPE 225
IHRD+K++++LL + +K++DFGF + + K + G+P + APE+ Y E
Sbjct: 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYA-TE 221
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP----------FYMSTDCENL 275
VD+WSLG+++ +V G P+ + ++ R+ +S +
Sbjct: 222 VDIWSLGIMVIEMVDGEPPY-------FSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDF 274
Query: 276 LKKFLVLNPAKRAS 289
L++ LV +P +RA+
Sbjct: 275 LERMLVRDPQERAT 288
Score = 100 bits (251), Expect = 3e-23
Identities = 30/102 (29%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD 546
L+++ME+ GG + D +V R+ E++ ++ A+ Y H + +IHRD+K++++LL
Sbjct: 117 LWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT 175
Query: 547 SEMNIKIADFGFSNEFTPG-NKLDTFCGSPPYAAPELFQGGA 587
+ +K++DFGF + + K + G+P + APE+
Sbjct: 176 LDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSL 217
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 191 bits (488), Expect = 2e-55
Identities = 65/293 (22%), Positives = 114/293 (38%), Gaps = 23/293 (7%)
Query: 9 STGKSETGRGSENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHV 68
S G E + L++ + + E E + +G+G+F +V K
Sbjct: 22 SGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREE-VHWMTHQPRVGRGSFGEVHRMKDK 80
Query: 69 PTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYAS 128
TG + A+K + E+ L P IV L+ + + + ME
Sbjct: 81 QTGFQCAVKKVRLEVFRV-------EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133
Query: 129 GGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE-MNIKIA 187
GG + + G + E A Q + ++Y H ++I+H D+KA+N+LL S+ +
Sbjct: 134 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALC 193
Query: 188 DFGFSNEFTPGN------KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 241
DFG + P D G+ + APE+ GK D VD+WS ++ +++G
Sbjct: 194 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK-VDIWSSCCMMLHMLNG 252
Query: 242 SLPFDGSTLRELRERVLRGKYR-----IPFYMSTDCENLLKKFLVLNPAKRAS 289
P+ + + IP + +++ L P RAS
Sbjct: 253 CHPW--TQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRAS 303
Score = 106 bits (266), Expect = 3e-25
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 482 ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAE 541
+ + ME GG + + G + E A Q + ++Y H ++I+H D+KA+
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKAD 179
Query: 542 NLLLDSE-MNIKIADFGFSNEFTPGN------KLDTFCGSPPYAAPELFQG 585
N+LL S+ + DFG + P D G+ + APE+ G
Sbjct: 180 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 190 bits (485), Expect = 2e-55
Identities = 81/254 (31%), Positives = 131/254 (51%), Gaps = 22/254 (8%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY + IG+G V A V TG+EVAI+ ++ Q + + E+ +M+ +PN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPN 78
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 166
IV L++VMEY +GG + D +V M E + A R+ + A+++ H ++
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPELFQGKKYDGPE 225
IHRD+K++N+LL + ++K+ DFGF + TP +K T G+P + APE+ K Y P+
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG-PK 196
Query: 226 VDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIP----------FYMSTDCENL 275
VD+WSLG++ ++ G P+ L E LR Y I +S +
Sbjct: 197 VDIWSLGIMAIEMIEGEPPY-------LNENPLRALYLIATNGTPELQNPEKLSAIFRDF 249
Query: 276 LKKFLVLNPAKRAS 289
L + L ++ KR S
Sbjct: 250 LNRCLEMDVEKRGS 263
Score = 100 bits (250), Expect = 2e-23
Identities = 38/105 (36%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Query: 484 EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
L++VMEY +GG + D +V M E + A R+ + A+++ H ++IHRD+K++N+
Sbjct: 89 GDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 544 LLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPELFQGGA 587
LL + ++K+ DFGF + TP +K T G+P + APE+ A
Sbjct: 148 LLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 192
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 190 bits (485), Expect = 3e-55
Identities = 67/260 (25%), Positives = 111/260 (42%), Gaps = 26/260 (10%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+ +GKG F + H TG+ + +K + + + + + +EV++M+ L+HPN++
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVL 70
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKII 167
K V+ +K L + EY GG + + R F + I S + Y H II
Sbjct: 71 KFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNII 130
Query: 168 HRDLKAENLLLDSEMNIKIADFGFS---------------NEFTPGNKLDTFCGSPPYAA 212
HRDL + N L+ N+ +ADFG + + K T G+P + A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 213 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLR-ELRERVLRGKYRIPFYMSTD 271
PE+ G+ YD +VDV+S G++L ++ R +RG +
Sbjct: 191 PEMINGRSYD-EKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY--CPPN 247
Query: 272 CENLLKKFLV----LNPAKR 287
C V L+P KR
Sbjct: 248 CPPSFFPITVRCCDLDPEKR 267
Score = 100 bits (251), Expect = 2e-23
Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 16/129 (12%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
+LK V+ +K L + EY GG + + R F + I S + Y H
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS---------------NEFTPGNKLDTFCGSPPY 577
IIHRDL + N L+ N+ +ADFG + + K T G+P +
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 578 AAPELFQGG 586
APE+ G
Sbjct: 189 MAPEMINGR 197
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 190 bits (485), Expect = 3e-55
Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 25/251 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLF-REVRIMKMLDHPNI 107
++ + +G+G F V AK K+VAIK + S +K F E+R + ++HPNI
Sbjct: 11 EVEEVVGRGAFGVVCKAKW--RAKDVAIKQ-----IESESERKAFIVELRQLSRVNHPNI 63
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR---QIVSAVQYCHQ- 163
VKL+ + LVMEYA GG +++ L + A Q V Y H
Sbjct: 64 VKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121
Query: 164 --KKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
K +IHRDLK NLLL + +KI DFG + + + GS + APE+F+G
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSN 179
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDG--STLRELRERVLRGKYR--IPFYMSTDCENLL 276
Y + DV+S G+IL+ +++ PFD + V G R + + E+L+
Sbjct: 180 YS-EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT-RPPLIKNLPKPIESLM 237
Query: 277 KKFLVLNPAKR 287
+ +P++R
Sbjct: 238 TRCWSKDPSQR 248
Score = 100 bits (251), Expect = 2e-23
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 485 KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR---QIVSAVQYCHQ---KKIIHRDL 538
+ LVMEYA GG +++ L + A Q V Y H K +IHRDL
Sbjct: 72 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDL 131
Query: 539 KAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
K NLLL + +KI DFG + + + GS + APE+F+G
Sbjct: 132 KPPNLLLVAGGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEG 177
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 189 bits (483), Expect = 7e-55
Identities = 82/287 (28%), Positives = 130/287 (45%), Gaps = 56/287 (19%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY+ + IG+G++ V ++ TG+ VAIK +++ +P + RE+R++K L HPN
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKK 165
+V L +V ++ L+LV EY V L + R + E ++ Q + AV +CH+
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDH-TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----------YAAPE 214
IHRD+K EN+L+ IK+ DFGF+ P Y +PE
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLL----------TGPSDYYDDEVATRWYRSPE 172
Query: 215 -LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS-----------TLRELRERVLRG-- 260
L +Y GP VDVW++G + L+SG + G TL +L R +
Sbjct: 173 LLVGDTQY-GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFS 231
Query: 261 ------KYRIPFY------------MSTDCENLLKKFLVLNPAKRAS 289
+IP +S LLK L ++P +R +
Sbjct: 232 TNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLT 278
Score = 94.2 bits (235), Expect = 3e-21
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 23/119 (19%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKKII 534
L +V ++ L+LV EY V L + R + E ++ Q + AV +CH+ I
Sbjct: 66 NLLEVFRRKRRLHLVFEYCDH-TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCI 124
Query: 535 HRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----------YAAPEL 582
HRD+K EN+L+ IK+ DFGF+ P Y +PEL
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARLL----------TGPSDYYDDEVATRWYRSPEL 173
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 187 bits (478), Expect = 2e-54
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 22/274 (8%)
Query: 30 SSRRESSRRERDEPHI--GKYKLLKTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNP 86
SR D+ I G+ + + IG G+F V K H +VA+K+++ T P
Sbjct: 6 HHHHHGSRDAADDWEIPDGQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTP 61
Query: 87 GSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKE 146
LQ EV +++ H NI+ T L +V ++ G ++ +L E +
Sbjct: 62 QQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASETKFEMK 120
Query: 147 ARAKF-RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLD 202
RQ + Y H K IIHRDLK+ N+ L + +KI DFG + + ++ ++ +
Sbjct: 121 KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 203 TFCGSPPYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFDG-STLRELRERVLR 259
GS + APE+ + + + + DV++ G++LY L++G LP+ + ++ E V R
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
Query: 260 GKYRIPFYMS--TDCENLLKKFLV----LNPAKR 287
G P ++C +K+ + +R
Sbjct: 241 G-SLSPDLSKVRSNCPKRMKRLMAECLKKKRDER 273
Score = 101 bits (254), Expect = 7e-24
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 483 TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKIIHRDLKAE 541
T L +V ++ G ++ +L E + RQ + Y H K IIHRDLK+
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSN 149
Query: 542 NLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPELFQGGAP 588
N+ L + +KI DFG + + ++ ++ + GS + APE+ +
Sbjct: 150 NIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 186 bits (475), Expect = 1e-53
Identities = 77/308 (25%), Positives = 127/308 (41%), Gaps = 59/308 (19%)
Query: 30 SSRRESSRRERDEPHIG-----KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL 84
SS + ++ KY+ L +G+G++ V ++ TG+ VAIK ++
Sbjct: 4 HHHHHSSGVDLGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD 63
Query: 85 NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-MK 143
+ + RE++++K L H N+V L +V + +K YLV E+ + D L L +
Sbjct: 64 DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNGLD 122
Query: 144 EKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT 203
+ + QI++ + +CH IIHRD+K EN+L+ +K+ DFGF+
Sbjct: 123 YQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTL-------- 174
Query: 204 FCGSPP-----------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS---- 248
+P Y APEL G G VDVW++G ++ + G F G
Sbjct: 175 --AAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID 232
Query: 249 -------TLRELRERVLRGKYRIPFY--------------------MSTDCENLLKKFLV 281
L L R + P + +S +L KK L
Sbjct: 233 QLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLH 292
Query: 282 LNPAKRAS 289
++P KR
Sbjct: 293 IDPDKRPF 300
Score = 93.8 bits (234), Expect = 5e-21
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 23/121 (19%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR-MKEKEARAKFRQIVSAVQYCHQKK 532
L+ L +V + +K YLV E+ + D L L + + + QI++ + +CH
Sbjct: 86 LVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN 144
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----------YAAPE 581
IIHRD+K EN+L+ +K+ DFGF+ +P Y APE
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTL----------AAPGEVYDDEVATRWYRAPE 194
Query: 582 L 582
L
Sbjct: 195 L 195
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 185 bits (471), Expect = 2e-53
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 23/280 (8%)
Query: 25 SSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL 84
S R S + + +GKG + V + + +AIK I +
Sbjct: 1 SMRSTEEGDCESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER-- 58
Query: 85 NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL-VLHGRMK 143
+ Q L E+ + K L H NIV+ + + ME GG + L G +K
Sbjct: 59 DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLK 118
Query: 144 EKEARAKF--RQIVSAVQYCHQKKIIHRDLKAENLLLDSEM-NIKIADFGFSNEFTPGN- 199
+ E F +QI+ ++Y H +I+HRD+K +N+L+++ +KI+DFG S N
Sbjct: 119 DNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178
Query: 200 KLDTFCGSPPYAAPELFQGKK--YDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRE-- 255
+TF G+ Y APE+ Y D+WSLG + + +G PF EL E
Sbjct: 179 CTETFTGTLQYMAPEIIDKGPRGYGKA-ADIWSLGCTIIEMATGKPPF-----YELGEPQ 232
Query: 256 ----RVLRGKYR--IPFYMSTDCENLLKKFLVLNPAKRAS 289
+V K IP MS + + + K +P KRA
Sbjct: 233 AAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRAC 272
Score = 100 bits (252), Expect = 1e-23
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 480 VIETEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIHR 536
+ + ME GG + L G +K+ E F +QI+ ++Y H +I+HR
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 537 DLKAENLLLDSEM-NIKIADFGFSNEFTPGN-KLDTFCGSPPYAAPELFQGGA 587
D+K +N+L+++ +KI+DFG S N +TF G+ Y APE+ G
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 199
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 184 bits (470), Expect = 4e-53
Identities = 76/256 (29%), Positives = 129/256 (50%), Gaps = 26/256 (10%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+ +L+ +G+G++ V A H TG+ VAIK + LQ++ +E+ IM+ D P+
Sbjct: 30 VFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPH 85
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFD-YLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 165
+VK + L++VMEY G V D + + + E E + + ++Y H +
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPELFQGKKYDGP 224
IHRD+KA N+LL++E + K+ADFG + + T K +T G+P + APE+ Q Y+
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYN-C 204
Query: 225 EVDVWSLGVILYTLVSGSLP-FDGSTLRELRERVLRGKYRIP----------FYMSTDCE 273
D+WSLG+ + G P D +R + + IP S +
Sbjct: 205 VADIWSLGITAIEMAEGKPPYADIHPMRAI--------FMIPTNPPPTFRKPELWSDNFT 256
Query: 274 NLLKKFLVLNPAKRAS 289
+ +K+ LV +P +RA+
Sbjct: 257 DFVKQCLVKSPEQRAT 272
Score = 100 bits (251), Expect = 2e-23
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 484 EKTLYLVMEYASGGEVFD-YLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
L++VMEY G V D + + + E E + + ++Y H + IHRD+KA N
Sbjct: 96 NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGN 155
Query: 543 LLLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPELFQGGA 587
+LL++E + K+ADFG + + T K +T G+P + APE+ Q
Sbjct: 156 ILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG 201
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 183 bits (466), Expect = 1e-52
Identities = 70/288 (24%), Positives = 127/288 (44%), Gaps = 22/288 (7%)
Query: 17 RGSENNISSSRLMSS--RRESSRRERDEPHI--GKYKLLKTIGKGNFAKVKLAK-HVPTG 71
RGS ++ + R R I + L IG G+F V K H
Sbjct: 3 RGSHHHHHHGTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWH---- 58
Query: 72 KEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGE 131
+VA+KI+ P Q EV +++ H NI+ + T+ L +V ++ G
Sbjct: 59 GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM-TKDNLAIVTQWCEGSS 117
Query: 132 VFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFG 190
++ +L V + + + RQ + Y H K IIHRD+K+ N+ L + +KI DFG
Sbjct: 118 LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFG 177
Query: 191 FS---NEFTPGNKLDTFCGSPPYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPF 245
+ + ++ +++ GS + APE+ + + + + DV+S G++LY L++G LP+
Sbjct: 178 LATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
Query: 246 DGSTLRELRERVLRGKYRIPFY--MSTDCENLLKKFLVL----NPAKR 287
R+ ++ Y P + +C +K+ + +R
Sbjct: 238 SHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEER 285
Score = 100 bits (251), Expect = 2e-23
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 483 TEKTLYLVMEYASGGEVFDYL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAE 541
T+ L +V ++ G ++ +L V + + + RQ + Y H K IIHRD+K+
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSN 161
Query: 542 NLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSS 592
N+ L + +KI DFG + + ++ +++ GS + APE+ + S
Sbjct: 162 NIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 182 bits (463), Expect = 3e-52
Identities = 85/279 (30%), Positives = 131/279 (46%), Gaps = 29/279 (10%)
Query: 29 MSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGS 88
M RE RD ++++ +G G F KV AK+ TG A K+I+
Sbjct: 2 MRKSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE--E 59
Query: 89 LQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFD-YLVLHGRMKEKEA 147
L+ E+ I+ DHP IVKL + L++++E+ GG V L L + E +
Sbjct: 60 LEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI 119
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP-GNKLDTFCG 206
+ RQ++ A+ + H K+IIHRDLKA N+L+ E +I++ADFG S + K D+F G
Sbjct: 120 QVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIG 179
Query: 207 SPPYAAPEL-----FQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGSTLRELRERVLRG 260
+P + APE+ + YD + D+WSLG+ L + P + + +R L
Sbjct: 180 TPYWMAPEVVMCETMKDTPYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVL------- 231
Query: 261 KYRIPF----------YMSTDCENLLKKFLVLNPAKRAS 289
+I S + + LK L NP R S
Sbjct: 232 -LKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPS 269
Score = 98.9 bits (247), Expect = 7e-23
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 484 EKTLYLVMEYASGGEVFD-YLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAEN 542
+ L++++E+ GG V L L + E + + RQ++ A+ + H K+IIHRDLKA N
Sbjct: 88 DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGN 147
Query: 543 LLLDSEMNIKIADFGFSNEFTP-GNKLDTFCGSPPYAAPE 581
+L+ E +I++ADFG S + K D+F G+P + APE
Sbjct: 148 VLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 187
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 181 bits (462), Expect = 2e-51
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 4/210 (1%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
++ + +G GN V H P+G +A K+I + P ++ RE++++ + P I
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYI 93
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KI 166
V + ++ + + ME+ GG + L GR+ E+ ++ + Y +K KI
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 153
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEV 226
+HRD+K N+L++S IK+ DFG S + + ++F G+ Y +PE QG Y +
Sbjct: 154 MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSV-QS 211
Query: 227 DVWSLGVILYTLVSGSLPFDGSTLRELRER 256
D+WS+G+ L + G P +EL
Sbjct: 212 DIWSMGLSLVEMAVGRYPIPPPDAKELELM 241
Score = 98.4 bits (245), Expect = 3e-22
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 483 TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAE 541
++ + + ME+ GG + L GR+ E+ ++ + Y +K KI+HRD+K
Sbjct: 102 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 161
Query: 542 NLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGG 586
N+L++S IK+ DFG S + + ++F G+ Y +PE QG
Sbjct: 162 NILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGT 205
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 177 bits (451), Expect = 1e-50
Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 67/292 (22%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII----DKTQLNPGSLQKLFREVRIMKML 102
KY+ L+ IG+G + V AK+ T + VA+K + D + +L RE+ ++K L
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL----REICLLKEL 58
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFD---YL-VLHGRMKEKEARAKFRQIVSAV 158
H NIV+L V+ ++K L LV E+ D Y +G + + ++ Q++ +
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGL 114
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--------- 209
+CH + ++HRDLK +NLL++ +K+A+FG + F G P
Sbjct: 115 GFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF----------GIPVRCYSAEVVT 164
Query: 210 --YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGST-LRELR----------E 255
Y P++ G K +D+WS G I L + P F G+ +L+ E
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE 224
Query: 256 RVLRGKYRIPFY------------------MSTDCENLLKKFLVLNPAKRAS 289
++P Y ++ +LL+ L NP +R S
Sbjct: 225 EQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS 276
Score = 91.4 bits (228), Expect = 2e-20
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 29/125 (23%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFD---YL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 531
+L V+ ++K L LV E+ D Y +G + + ++ Q++ + +CH +
Sbjct: 65 RLHDVLHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----------YAAP 580
++HRDLK +NLL++ +K+A+FG + F G P Y P
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAF----------GIPVRCYSAEVVTLWYRPP 170
Query: 581 ELFQG 585
++ G
Sbjct: 171 DVLFG 175
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 177 bits (451), Expect = 2e-50
Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 31/269 (11%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 107
Y+L + IG G A V+ A P ++VAIK I+ + S+ +L +E++ M HPNI
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT-SMDELLKEIQAMSQCHHPNI 75
Query: 108 VKLFQVIETEKTLYLVMEYASGGEVFDYL--------VLHGRMKEKEARAKFRQIVSAVQ 159
V + + L+LVM+ SGG V D + G + E R+++ ++
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS------NEFTPGNKLDTFCGSPPYAAP 213
Y H+ IHRD+KA N+LL + +++IADFG S + T TF G+P + AP
Sbjct: 136 YLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 195
Query: 214 E-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGSTLR-----------ELRERVLRG 260
E + Q + YD + D+WS G+ L +G+ P+ ++ L V
Sbjct: 196 EVMEQVRGYD-FKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDK 254
Query: 261 KYRIPFYMSTDCENLLKKFLVLNPAKRAS 289
+ + ++ L +P KR +
Sbjct: 255 EMLKKY--GKSFRKMISLCLQKDPEKRPT 281
Score = 90.9 bits (226), Expect = 3e-20
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 14/112 (12%)
Query: 487 LYLVMEYASGGEVFDYL--------VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDL 538
L+LVM+ SGG V D + G + E R+++ ++Y H+ IHRD+
Sbjct: 88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDV 147
Query: 539 KAENLLLDSEMNIKIADFGFS------NEFTPGNKLDTFCGSPPYAAPELFQ 584
KA N+LL + +++IADFG S + T TF G+P + APE+ +
Sbjct: 148 KAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 199
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 178 bits (454), Expect = 2e-50
Identities = 78/295 (26%), Positives = 120/295 (40%), Gaps = 36/295 (12%)
Query: 19 SENNISSSRLMSSRRESSRRERDEPHI----------GKYKLLKTIGKGNFAKVKLAKHV 68
+EN + +P + + L+ IG G+F V A+ V
Sbjct: 17 TENLYFQGAMDPMPAGGRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDV 76
Query: 69 PTGKEVAIKIIDKTQLNPG-SLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYA 127
+ VAIK + + Q + +EVR ++ L HPN ++ E T +LVMEY
Sbjct: 77 RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC 136
Query: 128 SGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIA 187
G V ++E E A + + Y H +IHRD+KA N+LL +K+
Sbjct: 137 LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLG 196
Query: 188 DFGFSNEFTPGNKLDTFCGSPPYAAPEL---FQGKKYDGPEVDVWSLGVILYTLVSGSLP 244
DFG ++ P N +F G+P + APE+ +YD +VDVWSLG+ L P
Sbjct: 197 DFGSASIMAPAN---SFVGTPYWMAPEVILAMDEGQYD-GKVDVWSLGITCIELAERKPP 252
Query: 245 -FDGSTLRELRERVLRGKYRIPF---------YMSTDCENLLKKFLVLNPAKRAS 289
F+ + + L Y I + S N + L P R +
Sbjct: 253 LFNMNAMSAL--------YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT 299
Score = 96.7 bits (241), Expect = 7e-22
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 484 EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
E T +LVMEY G V ++E E A + + Y H +IHRD+KA N+
Sbjct: 126 EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNI 185
Query: 544 LLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE 581
LL +K+ DFG ++ P N +F G+P + APE
Sbjct: 186 LLSEPGLVKLGDFGSASIMAPAN---SFVGTPYWMAPE 220
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 176 bits (450), Expect = 2e-50
Identities = 85/292 (29%), Positives = 132/292 (45%), Gaps = 67/292 (22%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII----DKTQLNPGSLQKLFREVRIMKML 102
++ ++ IG+G + V A++ TG+ VA+K I + + ++ RE+ ++K L
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI----REISLLKEL 59
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFD---YLVLHGR--MKEKEARAKFRQIVSA 157
+HPNIVKL VI TE LYLV E+ D ++ + ++ Q++
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 158 VQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-------- 209
+ +CH +++HRDLK +NLL+++E IK+ADFG + F G P
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF----------GVPVRTYTHEVV 165
Query: 210 ---YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST--------LRELR---E 255
Y APE+ G KY VD+WSLG I +V+ F G + R L E
Sbjct: 166 TLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 256 RVLRGKYRIPFY------------------MSTDCENLLKKFLVLNPAKRAS 289
V G +P Y + D +LL + L +P KR S
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Score = 91.0 bits (227), Expect = 3e-20
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 30/126 (23%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFD---YLVLHGR--MKEKEARAKFRQIVSAVQYCHQ 530
KL VI TE LYLV E+ D ++ + ++ Q++ + +CH
Sbjct: 66 KLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----------YAA 579
+++HRDLK +NLL+++E IK+ADFG + F G P Y A
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF----------GVPVRTYTHEVVTLWYRA 171
Query: 580 PELFQG 585
PE+ G
Sbjct: 172 PEILLG 177
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 176 bits (449), Expect = 4e-50
Identities = 66/254 (25%), Positives = 106/254 (41%), Gaps = 11/254 (4%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRI-MKMLDHPN 106
+ L +G G +V + TG +A+K + ++ N +++ ++ + +K D P
Sbjct: 27 LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS-GNKEENKRILMDLDVVLKSHDCPY 85
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH-QKK 165
IV+ F T +++ ME + G + E+ IV A+ Y +
Sbjct: 86 IVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG 145
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPE 225
+IHRD+K N+LLD IK+ DFG S D G Y APE P+
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPD 205
Query: 226 ----VDVWSLGVILYTLVSGSLPFDG-STLRELRERVLRG---KYRIPFYMSTDCENLLK 277
DVWSLG+ L L +G P+ T E+ +VL+ S D ++ +K
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVK 265
Query: 278 KFLVLNPAKRASLE 291
L + KR
Sbjct: 266 DCLTKDHRKRPKYN 279
Score = 97.8 bits (244), Expect = 2e-22
Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Query: 483 TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH-QKKIIHRDLKAE 541
T +++ ME + G + E+ IV A+ Y + +IHRD+K
Sbjct: 95 TNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPS 154
Query: 542 NLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAP 588
N+LLD IK+ DFG S D G Y APE P
Sbjct: 155 NILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDP 201
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 177 bits (450), Expect = 4e-50
Identities = 71/328 (21%), Positives = 131/328 (39%), Gaps = 75/328 (22%)
Query: 19 SENNISSSRLMSSRRESSRRERDEP----HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEV 74
++ L + + I +Y+ + +G+G + +V A T + V
Sbjct: 3 HHHHHHMGTLEAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETV 62
Query: 75 AIKII----DKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGG 130
AIK I ++ + ++ REV ++K L H NI++L VI L+L+ EYA
Sbjct: 63 AIKRIRLEHEEEGVPGTAI----REVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-- 116
Query: 131 EVFD---YLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS-----EM 182
D Y+ + + + ++ Q+++ V +CH ++ +HRDLK +NLLL
Sbjct: 117 --NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETP 174
Query: 183 NIKIADFGFSNEFTPGNKLDTFCGSPP-----------YAAPELFQGKKYDGPEVDVWSL 231
+KI DFG + F G P Y PE+ G ++ VD+WS+
Sbjct: 175 VLKIGDFGLARAF----------GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSI 224
Query: 232 GVILYTLVSGSLPFDGST-------------------------LRELRERVLRGKYR--- 263
I ++ + F G + L + ++ + + +
Sbjct: 225 ACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLK 284
Query: 264 --IPFYMSTDCENLLKKFLVLNPAKRAS 289
+ + + +LL L ++P KR S
Sbjct: 285 RVLGALLDDEGLDLLTAMLEMDPVKRIS 312
Score = 88.8 bits (221), Expect = 2e-19
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 33/126 (26%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFD---YLVLHGRMKEKEARAKFRQIVSAVQYCHQKK 532
+L VI L+L+ EYA D Y+ + + + ++ Q+++ V +CH ++
Sbjct: 97 ELKSVIHHNHRLHLIFEYAE----NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR 152
Query: 533 IIHRDLKAENLLLDS-----EMNIKIADFGFSNEFTPGNKLDTFCGSPP----------- 576
+HRDLK +NLLL +KI DFG + F G P
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF----------GIPIRQFTHEIITLW 202
Query: 577 YAAPEL 582
Y PE+
Sbjct: 203 YRPPEI 208
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 178 bits (452), Expect = 8e-50
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 16/231 (6%)
Query: 29 MSSRRESSRRERDEPHIGKYKLLKTIGKG--NFAKVKLAKHVPTGKEVAIKIIDKTQLNP 86
M + G Y+LL IGKG + V LA++ PTG+ V ++ I+ +
Sbjct: 9 MENLYFQGMSSFLPEG-GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN 67
Query: 87 GSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH--GRMKE 144
+ L E+ + K+ +HPNIV + L++V + + G D + H M E
Sbjct: 68 EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNE 127
Query: 145 KEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF--------T 196
+ ++ A+ Y H +HR +KA ++L+ + + ++ +
Sbjct: 128 LAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRV 187
Query: 197 PGNKLDTFCGSPPYAAPELFQ--GKKYDGPEVDVWSLGVILYTLVSGSLPF 245
+ P+ +PE+ Q + YD + D++S+G+ L +G +PF
Sbjct: 188 VHDFPKYSVKVLPWLSPEVLQQNLQGYD-AKSDIYSVGITACELANGHVPF 237
Score = 90.7 bits (225), Expect = 1e-19
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 10/108 (9%)
Query: 487 LYLVMEYASGGEVFDYLVLH--GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
L++V + + G D + H M E + ++ A+ Y H +HR +KA ++L
Sbjct: 101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHIL 160
Query: 545 LDSEMNIKIADFGFSNEF--------TPGNKLDTFCGSPPYAAPELFQ 584
+ + + ++ + + P+ +PE+ Q
Sbjct: 161 ISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQ 208
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 175 bits (446), Expect = 1e-49
Identities = 81/313 (25%), Positives = 131/313 (41%), Gaps = 71/313 (22%)
Query: 29 MSSRRESSRRERDEPHIGK---YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII----DK 81
M S + G Y+ L+ +G+G + V AK G+ VA+K I +
Sbjct: 1 MHHHHHHSSGRENLYFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAED 59
Query: 82 TQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFD---YL-V 137
+ ++ RE+ ++K L HPNIV L VI +E+ L LV E+ D L
Sbjct: 60 EGIPSTAI----REISLLKELHHPNIVSLIDVIHSERCLTLVFEFME----KDLKKVLDE 111
Query: 138 LHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTP 197
+++ + + Q++ V +CHQ +I+HRDLK +NLL++S+ +K+ADFG + F
Sbjct: 112 NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF-- 169
Query: 198 GNKLDTFCGSPP-----------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 246
G P Y AP++ G K VD+WS+G I +++G F
Sbjct: 170 --------GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP 221
Query: 247 G-------------------------STLRELRERVLRGKYRIPF-----YMSTDCENLL 276
G L ++R + + P+ + +LL
Sbjct: 222 GVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLL 281
Query: 277 KKFLVLNPAKRAS 289
L +P KR S
Sbjct: 282 SNMLCFDPNKRIS 294
Score = 91.5 bits (228), Expect = 3e-20
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 29/125 (23%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFD---YL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 531
L VI +E+ L LV E+ D L +++ + + Q++ V +CHQ
Sbjct: 83 SLIDVIHSERCLTLVFEFME----KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----------YAAP 580
+I+HRDLK +NLL++S+ +K+ADFG + F G P Y AP
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAF----------GIPVRSYTHEVVTLWYRAP 188
Query: 581 ELFQG 585
++ G
Sbjct: 189 DVLMG 193
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 174 bits (443), Expect = 3e-49
Identities = 74/300 (24%), Positives = 121/300 (40%), Gaps = 75/300 (25%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKML 102
++K L+ +G G +A V + TG VA+K + K G ++ RE+ +MK L
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV-KLDSEEGTPSTAI----REISLMKEL 60
Query: 103 DHPNIVKLFQVIETEKTLYLVMEY-----ASGGEVFDYLVLHGRMKEKEARAKFRQIVSA 157
H NIV+L+ VI TE L LV E+ + ++ + Q++
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 158 VQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-------- 209
+ +CH+ KI+HRDLK +NLL++ +K+ DFG + F G P
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF----------GIPVNTFSSEVV 170
Query: 210 ---YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST----------------- 249
Y AP++ G + +D+WS G IL +++G F G+
Sbjct: 171 TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNE 230
Query: 250 --------------------LRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRAS 289
R+LR+ + + + + + L L LNP R S
Sbjct: 231 SLWPSVTKLPKYNPNIQQRPPRDLRQVL---QPHTKEPLDGNLMDFLHGLLQLNPDMRLS 287
Score = 90.7 bits (226), Expect = 5e-20
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 26/123 (21%)
Query: 476 KLFQVIETEKTLYLVMEY-----ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 530
+L+ VI TE L LV E+ + ++ + Q++ + +CH+
Sbjct: 67 RLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE 126
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----------YAA 579
KI+HRDLK +NLL++ +K+ DFG + F G P Y A
Sbjct: 127 NKILHRDLKPQNLLINKRGQLKLGDFGLARAF----------GIPVNTFSSEVVTLWYRA 176
Query: 580 PEL 582
P++
Sbjct: 177 PDV 179
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 172 bits (438), Expect = 7e-49
Identities = 82/291 (28%), Positives = 132/291 (45%), Gaps = 67/291 (23%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII----DKTQLNPGSLQKLFREVRIMKML 102
KY L+ IG+G + V A++ G+ A+K I + + ++ RE+ I+K L
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTI----REISILKEL 57
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFD---YL-VLHGRMKEKEARAKFRQIVSAV 158
H NIVKL+ VI T+K L LV E+ D L V G ++ A++ Q+++ +
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--------- 209
YCH ++++HRDLK +NLL++ E +KIADFG + F G P
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF----------GIPVRKYTHEIVT 163
Query: 210 --YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST-LRELR----------ER 256
Y AP++ G K +D+WS+G I +V+G+ F G + +L +
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK 223
Query: 257 VLRGKYRIPFY------------------MSTDCENLLKKFLVLNPAKRAS 289
+P Y + +LL K L L+P +R +
Sbjct: 224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT 274
Score = 91.0 bits (227), Expect = 3e-20
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 29/125 (23%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFD---YL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 531
KL+ VI T+K L LV E+ D L V G ++ A++ Q+++ + YCH +
Sbjct: 64 KLYDVIHTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----------YAAP 580
+++HRDLK +NLL++ E +KIADFG + F G P Y AP
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAF----------GIPVRKYTHEIVTLWYRAP 169
Query: 581 ELFQG 585
++ G
Sbjct: 170 DVLMG 174
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 173 bits (441), Expect = 8e-49
Identities = 75/292 (25%), Positives = 114/292 (39%), Gaps = 68/292 (23%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG----SLQKLFREVRIMKML 102
Y L +G+G +A V K T VA+K I + + G ++ REV ++K L
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI-RLEHEEGAPCTAI----REVSLLKDL 57
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFD---YL-VLHGRMKEKEARAKFRQIVSAV 158
H NIV L +I TEK+L LV EY D YL + + Q++ +
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYLD----KDLKQYLDDCGNIINMHNVKLFLFQLLRGL 113
Query: 159 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--------- 209
YCH++K++HRDLK +NLL++ +K+ADFG + P
Sbjct: 114 AYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAK----------SIPTKTYDNEVVT 163
Query: 210 --YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST------------------ 249
Y P++ G ++D+W +G I Y + +G F GST
Sbjct: 164 LWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEE 223
Query: 250 -------LRELRERVLRGKYRIPF-----YMSTDCENLLKKFLVLNPAKRAS 289
E + + +D +LL K L R S
Sbjct: 224 TWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRIS 275
Score = 89.6 bits (223), Expect = 1e-19
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 29/125 (23%)
Query: 476 KLFQVIETEKTLYLVMEYASGGEVFD---YL-VLHGRMKEKEARAKFRQIVSAVQYCHQK 531
L +I TEK+L LV EY D YL + + Q++ + YCH++
Sbjct: 64 TLHDIIHTEKSLTLVFEYLD----KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----------YAAP 580
K++HRDLK +NLL++ +K+ADFG + P Y P
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAK----------SIPTKTYDNEVVTLWYRPP 169
Query: 581 ELFQG 585
++ G
Sbjct: 170 DILLG 174
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 173 bits (440), Expect = 9e-49
Identities = 55/287 (19%), Positives = 104/287 (36%), Gaps = 22/287 (7%)
Query: 23 ISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKT 82
I +R + R + + +++ + + + + D
Sbjct: 39 IRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWP 98
Query: 83 QLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRM 142
+P + ++R M N V Q + LY+ M+ + D++ +
Sbjct: 99 LSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL 158
Query: 143 KEKE---ARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS------- 192
+++E F QI AV++ H K ++HRDLK N+ + +K+ DFG
Sbjct: 159 EDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 218
Query: 193 ------NEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 246
G+ Y +PE G Y +VD++SLG+IL+ L+ F
Sbjct: 219 EEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYS-HKVDIFSLGLILFELLY---SFS 274
Query: 247 GSTLR-ELRERVLRGKYRIPFYMSTDCE-NLLKKFLVLNPAKRASLE 291
R + V K+ + F E +++ L +P +R
Sbjct: 275 TQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEAT 321
Score = 113 bits (283), Expect = 1e-27
Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 16/120 (13%)
Query: 482 ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKE---ARAKFRQIVSAVQYCHQKKIIHRDL 538
+ LY+ M+ + D++ ++++E F QI AV++ H K ++HRDL
Sbjct: 131 SPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDL 190
Query: 539 KAENLLLDSEMNIKIADFGFS-------------NEFTPGNKLDTFCGSPPYAAPELFQG 585
K N+ + +K+ DFG G+ Y +PE G
Sbjct: 191 KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHG 250
Score = 72.6 bits (178), Expect = 6e-14
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 35 SSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFR 94
+SR D ++ ++ +G+G F V AK+ AIK I + +K+ R
Sbjct: 1 ASRYLTD------FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMR 53
Query: 95 EVRIMKMLDHPNIVKLF 111
EV+ + L+HP IV+ F
Sbjct: 54 EVKALAKLEHPGIVRYF 70
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 173 bits (441), Expect = 1e-48
Identities = 78/302 (25%), Positives = 115/302 (38%), Gaps = 86/302 (28%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKL------FREVRIMK 100
+Y+ L +G+G FA V A+ T + VAIK K +L S K RE+++++
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIK---KIKLGHRSEAKDGINRTALREIKLLQ 67
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEY---------ASGGEVFDYLVLHGRMKEKEARAKF 151
L HPNI+ L + + LV ++ V +A
Sbjct: 68 ELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLT---------PSHIKAYM 118
Query: 152 RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-- 209
+ ++Y HQ I+HRDLK NLLLD +K+ADFG + F GSP
Sbjct: 119 LMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF----------GSPNRA 168
Query: 210 ---------YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSG------------------ 241
Y APE LF + Y G VD+W++G IL L+
Sbjct: 169 YTHQVVTRWYRAPELLFGARMY-GVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFE 227
Query: 242 --------------SLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKR 287
SLP D T + L + D +L++ + NP R
Sbjct: 228 TLGTPTEEQWPDMCSLP-DYVTFKSFPGIPLHHIFS---AAGDDLLDLIQGLFLFNPCAR 283
Query: 288 AS 289
+
Sbjct: 284 IT 285
Score = 88.0 bits (219), Expect = 5e-19
Identities = 34/130 (26%), Positives = 46/130 (35%), Gaps = 39/130 (30%)
Query: 476 KLFQVIETEKTLYLVMEY---------ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 526
L + + LV ++ V +A + ++
Sbjct: 76 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLT---------PSHIKAYMLMTLQGLE 126
Query: 527 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP---------- 576
Y HQ I+HRDLK NLLLD +K+ADFG + F GSP
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF----------GSPNRAYTHQVVTR 176
Query: 577 -YAAPELFQG 585
Y APEL G
Sbjct: 177 WYRAPELLFG 186
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 172 bits (438), Expect = 2e-48
Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 16/259 (6%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRI-MKMLDHPN 106
K L IG+G + V H P+G+ +A+K I T ++ ++L ++ + M+ D P
Sbjct: 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRST-VDEKEQKQLLMDLDVVMRSSDCPY 82
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDY----LVLHGRMKEKEARAKFRQIVSAVQYCH 162
IV+ + + E ++ ME S Y VL + E+ V A+ +
Sbjct: 83 IVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK 142
Query: 163 QK-KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY 221
+ KIIHRD+K N+LLD NIK+ DFG S + G PY APE
Sbjct: 143 ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSAS 202
Query: 222 DGP---EVDVWSLGVILYTLVSGSLPFDG-STLRELRERVLRG-----KYRIPFYMSTDC 272
DVWSLG+ LY L +G P+ +++ + +V++G S
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSF 262
Query: 273 ENLLKKFLVLNPAKRASLE 291
N + L + +KR +
Sbjct: 263 INFVNLCLTKDESKRPKYK 281
Score = 88.9 bits (221), Expect = 2e-19
Identities = 35/109 (32%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 484 EKTLYLVMEYASGGEVFDY----LVLHGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDL 538
E ++ ME S Y VL + E+ V A+ + + KIIHRD+
Sbjct: 93 EGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDI 152
Query: 539 KAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGA 587
K N+LLD NIK+ DFG S + G PY APE A
Sbjct: 153 KPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA 201
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 170 bits (434), Expect = 2e-48
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 14/254 (5%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRI-MKMLDHPN 106
+ + +G+G + V+ +HVP+G+ +A+K I T +N ++L ++ I M+ +D P
Sbjct: 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT-VNSQEQKRLLMDLDISMRTVDCPF 67
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDY---LVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
V + + E +++ ME Y + + E IV A+++ H
Sbjct: 68 TVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 127
Query: 164 K-KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE----LFQG 218
K +IHRD+K N+L+++ +K+ DFG S D G PY APE
Sbjct: 128 KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQ 187
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDG-STLRELRERVLRGK--YRIPFYMSTDCENL 275
K Y D+WSLG+ + L P+D T + ++V+ S + +
Sbjct: 188 KGYSVK-SDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDF 246
Query: 276 LKKFLVLNPAKRAS 289
+ L N +R +
Sbjct: 247 TSQCLKKNSKERPT 260
Score = 91.9 bits (229), Expect = 1e-20
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Query: 483 TEKTLYLVMEYASGGEVFDY---LVLHGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDL 538
E +++ ME Y + + E IV A+++ H K +IHRD+
Sbjct: 77 REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDV 136
Query: 539 KAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG 585
K N+L+++ +K+ DFG S D G PY APE
Sbjct: 137 KPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINP 183
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 170 bits (432), Expect = 7e-48
Identities = 73/254 (28%), Positives = 123/254 (48%), Gaps = 17/254 (6%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMKMLD 103
+YK++ +G G + V LA+ +VAIK I +L++ REV L
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAI-FIPPREKEETLKRFEREVHNSSQLS 69
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
H NIV + V E + YLVMEY G + +Y+ HG + A QI+ +++ H
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD 129
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGF-----SNEFTPGNKLDTFCGSPPYAAPELFQG 218
+I+HRD+K +N+L+DS +KI DFG T N G+ Y +PE +G
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTN---HVLGTVQYFSPEQAKG 186
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDGST-----LRELRERVLRGKYRIPFYMSTDCE 273
+ D D++S+G++LY ++ G PF+G T ++ +++ V + +
Sbjct: 187 EATD-ECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLS 245
Query: 274 NLLKKFLVLNPAKR 287
N++ + + A R
Sbjct: 246 NVILRATEKDKANR 259
Score = 92.3 bits (230), Expect = 1e-20
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 482 ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAE 541
E + YLVMEY G + +Y+ HG + A QI+ +++ H +I+HRD+K +
Sbjct: 81 EEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQ 140
Query: 542 NLLLDSEMNIKIADFGF-----SNEFTPGNKLDTFCGSPPYAAPELFQGGA 587
N+L+DS +KI DFG T N G+ Y +PE +G A
Sbjct: 141 NILIDSNKTLKIFDFGIAKALSETSLTQTN---HVLGTVQYFSPEQAKGEA 188
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 170 bits (432), Expect = 1e-47
Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 20/239 (8%)
Query: 22 NISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDK 81
+++S S E +P G ++L++ +G G + +V +HV TG+ AIK++D
Sbjct: 1 SMASDSPARSLDEIDLSALRDPA-GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD- 58
Query: 82 TQLNPGSLQKLFREVRIMKML-DHPNIVKLF------QVIETEKTLYLVMEYASGGEVFD 134
+ +++ +E+ ++K H NI + + L+LVME+ G V D
Sbjct: 59 --VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD 116
Query: 135 YL--VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 192
+ +KE+ R+I+ + + HQ K+IHRD+K +N+LL +K+ DFG S
Sbjct: 117 LIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176
Query: 193 NEFTPG-NKLDTFCGSPPYAAPELFQGKK-----YDGPEVDVWSLGVILYTLVSGSLPF 245
+ + +TF G+P + APE+ + YD + D+WSLG+ + G+ P
Sbjct: 177 AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDF-KSDLWSLGITAIEMAEGAPPL 234
Score = 96.3 bits (240), Expect = 8e-22
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 487 LYLVMEYASGGEVFDYL--VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLL 544
L+LVME+ G V D + +KE+ R+I+ + + HQ K+IHRD+K +N+L
Sbjct: 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL 161
Query: 545 LDSEMNIKIADFGFSNEFTPG-NKLDTFCGSPPYAAPE 581
L +K+ DFG S + + +TF G+P + APE
Sbjct: 162 LTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPE 199
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 169 bits (430), Expect = 5e-47
Identities = 70/300 (23%), Positives = 135/300 (45%), Gaps = 63/300 (21%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII----DKTQLNPGSLQKLFREVRIM 99
+ KY+ L IG+G F +V A+H TG++VA+K + +K +L RE++I+
Sbjct: 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL----REIKIL 70
Query: 100 KMLDHPNIVKLFQVIETEKT--------LYLVMEYASGGEVFD---YL-VLHGRMKEKEA 147
++L H N+V L ++ T+ + +YLV ++ D L + + E
Sbjct: 71 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE----HDLAGLLSNVLVKFTLSEI 126
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGS 207
+ + +++ + Y H+ KI+HRD+KA N+L+ + +K+ADFG + F+ +
Sbjct: 127 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYT 186
Query: 208 PP-----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG--------------------- 241
Y PEL G++ GP +D+W G I+ + +
Sbjct: 187 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 246
Query: 242 -----------SLP-FDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRAS 289
+ ++ L + ++R ++ + + + +L+ K LVL+PA+R
Sbjct: 247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLK-AYVRDPYALDLIDKLLVLDPAQRID 305
Score = 83.4 bits (207), Expect = 2e-17
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 13/113 (11%)
Query: 482 ETEKTLYLVMEYASGGEVFD---YL-VLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 537
+ ++YLV ++ D L + + E + + +++ + Y H+ KI+HRD
Sbjct: 94 RCKGSIYLVFDFCE----HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRD 149
Query: 538 LKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-----YAAPELFQG 585
+KA N+L+ + +K+ADFG + F+ + Y PEL G
Sbjct: 150 MKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLG 202
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 167 bits (424), Expect = 1e-46
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Query: 45 IGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMKML 102
G Y+L + +G+G V A+ + VA+K++ L +P ++ RE R L
Sbjct: 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLM-SETLSSDPVFRTRMQREARTAGRL 91
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
P++V + E + LY+ M +G ++ L G + A A RQI SA+ H
Sbjct: 92 QEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAH 151
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGF-----SNEFTPGNKLDTFCGSPPYAAPELFQ 217
HRD+K EN+L+ ++ + DFG + T G+ Y APE F
Sbjct: 152 AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLG---NTVGTLYYMAPERFS 208
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTL 250
D+++L +LY ++GS P+ G L
Sbjct: 209 ESHAT-YRADIYALTCVLYECLTGSPPYQGDQL 240
Score = 91.9 bits (229), Expect = 2e-20
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 8/111 (7%)
Query: 482 ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAE 541
E + LY+ M +G ++ L G + A A RQI SA+ H HRD+K E
Sbjct: 104 EIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPE 163
Query: 542 NLLLDSEMNIKIADFGF-----SNEFTPGNKLDTFCGSPPYAAPELFQGGA 587
N+L+ ++ + DFG + T G+ Y APE F
Sbjct: 164 NILVSADDFAYLVDFGIASATTDEKLTQLG---NTVGTLYYMAPERFSESH 211
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 165 bits (420), Expect = 4e-46
Identities = 71/303 (23%), Positives = 108/303 (35%), Gaps = 76/303 (25%)
Query: 44 HIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII-------DKTQLNPGSLQKLFREV 96
+Y+ + IG G + V A+ +G VA+K + L ++ REV
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTV----REV 62
Query: 97 RIMKML---DHPNIVKLFQVI-----ETEKTLYLVMEYASGGEVFD---YLVLHGRMKEK 145
+++ L +HPN+V+L V + E + LV E+ D YL
Sbjct: 63 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLP 118
Query: 146 EARAK--FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT 203
K RQ + + + H I+HRDLK EN+L+ S +K+ADFG + +
Sbjct: 119 AETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-------- 170
Query: 204 FCGSPP----------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST---- 249
Y APE+ Y VD+WS+G I + F G++
Sbjct: 171 --SYQMALTPVVVTLWYRAPEVLLQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 227
Query: 250 ------------------LRELRERVLRGKYRIPF-----YMSTDCENLLKKFLVLNPAK 286
L + P M LL + L NP K
Sbjct: 228 LGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHK 287
Query: 287 RAS 289
R S
Sbjct: 288 RIS 290
Score = 83.8 bits (208), Expect = 9e-18
Identities = 32/127 (25%), Positives = 47/127 (37%), Gaps = 34/127 (26%)
Query: 476 KLFQVI-----ETEKTLYLVMEYASGGEVFD---YLVLHGRMKEKEARAK--FRQIVSAV 525
+L V + E + LV E+ D YL K RQ + +
Sbjct: 78 RLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 133
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--------- 576
+ H I+HRDLK EN+L+ S +K+ADFG + +
Sbjct: 134 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY----------SYQMALTPVVVTL 183
Query: 577 -YAAPEL 582
Y APE+
Sbjct: 184 WYRAPEV 190
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 163 bits (416), Expect = 3e-45
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 76/308 (24%)
Query: 39 ERDEP--HIGKYKLLKTIGKGNFAKVKLAKHV-PTGKEVAIKII----DKTQLNPGSLQK 91
E+D +Y+ + IG+G + KV A+ + G+ VA+K + + + ++
Sbjct: 2 EKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTI-- 59
Query: 92 LFREVRIMKML---DHPNIVKLFQVI-----ETEKTLYLVMEYASGGEVFD---YLVLHG 140
REV +++ L +HPN+V+LF V + E L LV E+ D YL
Sbjct: 60 --REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVP 113
Query: 141 RMKEKEARAK--FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPG 198
K Q++ + + H +++HRDLK +N+L+ S IK+ADFG + +
Sbjct: 114 EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--- 170
Query: 199 NKLDTFCGSPP----------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS 248
Y APE+ Y VD+WS+G I + F GS
Sbjct: 171 -------SFQMALTSVVVTLWYRAPEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGS 222
Query: 249 TLRELRERVLR--G--------------KYRIPFY-----------MSTDCENLLKKFLV 281
+ + ++L G + + ++LL K L
Sbjct: 223 SDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLT 282
Query: 282 LNPAKRAS 289
NPAKR S
Sbjct: 283 FNPAKRIS 290
Score = 86.5 bits (215), Expect = 1e-18
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 34/127 (26%)
Query: 476 KLFQVI-----ETEKTLYLVMEYASGGEVFD---YLVLHGRMKEKEARAK--FRQIVSAV 525
+LF V + E L LV E+ D YL K Q++ +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 526 QYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--------- 576
+ H +++HRDLK +N+L+ S IK+ADFG + +
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY----------SFQMALTSVVVTL 183
Query: 577 -YAAPEL 582
Y APE+
Sbjct: 184 WYRAPEV 190
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 163 bits (415), Expect = 1e-44
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
L + IG+GNF +V + VA+K + L P K +E RI+K HPNIV
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSC-RETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKII 167
+L V ++ +Y+VME GG+ +L G + + + ++Y K I
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235
Query: 168 HRDLKAENLLLDSEMNIKIADFGFS-----NEFTPGNKLDTFCGSPPY--AAPELFQGKK 220
HRDL A N L+ + +KI+DFG S + L P APE +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV----PVKWTAPEALNYGR 291
Query: 221 YDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
Y E DVWS G++L+ S G+ P+ + ++ RE V +G R+P
Sbjct: 292 YS-SESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG-GRLP 335
Score = 81.5 bits (202), Expect = 1e-16
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
+++L V ++ +Y+VME GG+ +L G + + + ++Y K
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
IHRDL A N L+ + +KI+DFG S
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMS 260
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 161 bits (409), Expect = 1e-44
Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 18/257 (7%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL--NPGSLQKLFREVRIMKMLD 103
+Y+L + +G G ++V LA+ + ++VA+K++ + L +P + RE + L+
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALN 70
Query: 104 HPNIVKLFQVIETE----KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 159
HP IV ++ E E Y+VMEY G + D + G M K A A+
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFG----FSNEFTPGNKLDTFCGSPPYAAPEL 215
+ HQ IIHRD+K N+++ + +K+ DFG ++ + G+ Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGST-----LRELRERVLRGKYRIPFYMST 270
+G D DV+SLG +LY +++G PF G + + +RE + R +S
Sbjct: 191 ARGDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE-GLSA 248
Query: 271 DCENLLKKFLVLNPAKR 287
D + ++ K L NP R
Sbjct: 249 DLDAVVLKALAKNPENR 265
Score = 90.8 bits (226), Expect = 4e-20
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDS 547
Y+VMEY G + D + G M K A A+ + HQ IIHRD+K N+++ +
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 548 EMNIKIADFG----FSNEFTPGNKLDTFCGSPPYAAPELFQGGA 587
+K+ DFG ++ + G+ Y +PE +G +
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 162 bits (411), Expect = 2e-44
Identities = 60/245 (24%), Positives = 109/245 (44%), Gaps = 16/245 (6%)
Query: 12 KSETGRGSENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTG 71
+ +T ++ S +S ++ + D+ + + +G+G + V+ +HVP+G
Sbjct: 22 QPQTSSTPPRDLDSKACISIGNQNFEVKADD-----LEPIMELGRGAYGVVEKMRHVPSG 76
Query: 72 KEVAIKIIDKTQLNPGSLQKLFREVRI-MKMLDHPNIVKLFQVIETEKTLYLVMEYASGG 130
+ +A+K I T +N ++L ++ I M+ +D P V + + E +++ ME
Sbjct: 77 QIMAVKRIRAT-VNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTS 135
Query: 131 EVFDY---LVLHGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAENLLLDSEMNIKI 186
Y + + E IV A+++ H K +IHRD+K N+L+++ +K+
Sbjct: 136 LDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKM 195
Query: 187 ADFGFSNEFTPGNKLDTFCGSPPYAAPE----LFQGKKYDGPEVDVWSLGVILYTLVSGS 242
DFG S G PY APE K Y D+WSLG+ + L
Sbjct: 196 CDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVK-SDIWSLGITMIELAILR 254
Query: 243 LPFDG 247
P+D
Sbjct: 255 FPYDS 259
Score = 87.0 bits (216), Expect = 1e-18
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Query: 483 TEKTLYLVMEYASGGEVFDY---LVLHGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDL 538
E +++ ME Y + + E IV A+++ H K +IHRD+
Sbjct: 121 REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDV 180
Query: 539 KAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGA 587
K N+L+++ +K+ DFG S G PY APE
Sbjct: 181 KPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPEL 229
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 160 bits (406), Expect = 5e-44
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 41/240 (17%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKE----VAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K +K +G G F V +P G++ VAIK + + +P + +++ E +M +D+
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDN 76
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF---------RQIV 155
P++ +L + T+ L+ + G + DY+ +E + QI
Sbjct: 77 PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYV--------REHKDNIGSQYLLNWCVQIA 127
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEF---TPGNKLDTFCGS 207
+ Y ++++HRDL A N+L+ + ++KI DFG + E G K+
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV------ 181
Query: 208 P-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
P + A E + Y + DVWS GV ++ L++ GS P+DG E+ + +G R+P
Sbjct: 182 PIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-ERLP 239
Score = 78.4 bits (194), Expect = 6e-16
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF---------RQIVSA 524
+ +L + T+ L+ + G + DY+ +E + QI
Sbjct: 79 VCRLLGIC-LTSTVQLITQLMPFGCLLDYV--------REHKDNIGSQYLLNWCVQIAKG 129
Query: 525 VQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
+ Y ++++HRDL A N+L+ + ++KI DFG +
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 161 bits (410), Expect = 8e-44
Identities = 74/332 (22%), Positives = 130/332 (39%), Gaps = 87/332 (26%)
Query: 32 RRESSRRERDEPHIGKYKLLKT-IGKGNFAKVKLA--KHVPTGKEVAIKIIDKTQLNPGS 88
+ SS RER E ++ +G+G + V A K K+ A+K I+ T ++ +
Sbjct: 9 VKLSSERERVED---LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA 65
Query: 89 LQKLFREVRIMKMLDHPNIVKLFQVI--ETEKTLYLVMEYASGGEVFD---YLVLHGRMK 143
RE+ +++ L HPN++ L +V ++ ++L+ +YA D + H K
Sbjct: 66 C----REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE----HDLWHIIKFHRASK 117
Query: 144 EKEARAKF---------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN----IKIADFG 190
+ + QI+ + Y H ++HRDLK N+L+ E +KIAD G
Sbjct: 118 ANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG 177
Query: 191 FSNEFTPGNKLDTFCGSPP------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 244
F+ F + L P Y APEL G ++ +D+W++G I L++
Sbjct: 178 FARLF--NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI 235
Query: 245 FDGST-------------------------------LRELRE-RVLRGKYRIPFY----- 267
F ++++ E L +R Y
Sbjct: 236 FHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSL 295
Query: 268 ----------MSTDCENLLKKFLVLNPAKRAS 289
+ +LL+K L ++P KR +
Sbjct: 296 IKYMEKHKVKPDSKAFHLLQKLLTMDPIKRIT 327
Score = 87.5 bits (217), Expect = 1e-18
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 30/131 (22%)
Query: 476 KLFQVI--ETEKTLYLVMEYASGGEVFD---YLVLHGRMKEKEARAKF---------RQI 521
L +V ++ ++L+ +YA D + H K + + QI
Sbjct: 82 SLQKVFLSHADRKVWLLFDYAE----HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQI 137
Query: 522 VSAVQYCHQKKIIHRDLKAENLLLDSEMN----IKIADFGFSNEFTPGNKLDTFCGSPP- 576
+ + Y H ++HRDLK N+L+ E +KIAD GF+ F + L P
Sbjct: 138 LDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF--NSPLKPLADLDPV 195
Query: 577 -----YAAPEL 582
Y APEL
Sbjct: 196 VVTFWYRAPEL 206
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 160 bits (408), Expect = 1e-43
Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 54/292 (18%)
Query: 41 DEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIK--IIDKTQLNPGSLQKLFREVRI 98
E Y K IG G+F V AK V + EVAIK + DK N RE++I
Sbjct: 35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESD-EVAIKKVLQDKRFKN--------RELQI 85
Query: 99 MKMLDHPNIVKLFQVI------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK--EARAK 150
M+++ HPN+V L + E L LV+EY V+ + ++K+ K
Sbjct: 86 MRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV-PETVYRASRHYAKLKQTMPMLLIK 144
Query: 151 FR--QIVSAVQYCHQKKIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGS 207
Q++ ++ Y H I HRD+K +NLLLD +K+ DFG + G ++ S
Sbjct: 145 LYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICS 204
Query: 208 PPYAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-STLRELRE--RVL----- 258
Y APEL F Y +D+WS G ++ L+ G F G S + +L E +VL
Sbjct: 205 RYYRAPELIFGATNYTTN-IDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSR 263
Query: 259 ---------RGKYRIPFY------------MSTDCENLLKKFLVLNPAKRAS 289
+++ P D +L+ + L P+ R +
Sbjct: 264 EQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT 315
Score = 70.8 bits (174), Expect = 3e-13
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 482 ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK--EARAKFR--QIVSAVQYCHQKKIIHRD 537
+ E L LV+EY V+ + ++K+ K Q++ ++ Y H I HRD
Sbjct: 108 KDEVFLNLVLEYV-PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRD 166
Query: 538 LKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
+K +NLLLD +K+ DFG + G ++ S Y APEL
Sbjct: 167 IKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPEL 212
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 158 bits (402), Expect = 2e-43
Identities = 69/284 (24%), Positives = 130/284 (45%), Gaps = 52/284 (18%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML-DHP 105
Y+L++ +G+G +++V A ++ ++V +KI+ P +K+ RE++I++ L P
Sbjct: 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL-----KPVKKKKIKREIKILENLRGGP 91
Query: 106 NIVKLFQVI--ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQ 163
NI+ L ++ +T LV E+ D+ L+ + + + R +I+ A+ YCH
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS 148
Query: 164 KKIIHRDLKAENLLLDSE-MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE-LFQGKKY 221
I+HRD+K N+++D E +++ D+G + + PG + + S + PE L + Y
Sbjct: 149 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 208
Query: 222 DGPEVDVWSLGVILYTLVSGSLP-FDG-STLRELRE--RVL--------RGKY------- 262
D +D+WSLG +L +++ P F G +L +VL KY
Sbjct: 209 D-YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 267
Query: 263 ---------RIPF----------YMSTDCENLLKKFLVLNPAKR 287
R + +S + + L K L + R
Sbjct: 268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 311
Score = 74.2 bits (183), Expect = 2e-14
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 469 SGGETLLKLFQVI--ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 526
GG ++ L ++ +T LV E+ D+ L+ + + + R +I+ A+
Sbjct: 88 RGGPNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDYDIRFYMYEILKALD 144
Query: 527 YCHQKKIIHRDLKAENLLLDSE-MNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
YCH I+HRD+K N+++D E +++ D+G + + PG + + S + PEL
Sbjct: 145 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 201
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 159 bits (405), Expect = 5e-43
Identities = 88/334 (26%), Positives = 132/334 (39%), Gaps = 68/334 (20%)
Query: 9 STGKSETGRGSENNISSSRLMSSRRESSR-----RERDEPHIGKYKLLKTIGKGNFAKVK 63
+ K + ++ SR + ++ + D P Y K IG G+F V
Sbjct: 12 ESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVY 71
Query: 64 LAKHVPTGKEVAIK--IIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVI------E 115
AK +G+ VAIK + DK N RE++IM+ LDH NIV+L +
Sbjct: 72 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 123
Query: 116 TEKTLYLVMEYASGGEVFD---YLVLHGRMKEK----EARAKFR--QIVSAVQYCHQKKI 166
E L LV++Y Y V + K K Q+ ++ Y H I
Sbjct: 124 DEVYLNLVLDY------VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 177
Query: 167 IHRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYAAPEL-FQGKKYDGP 224
HRD+K +NLLLD + + K+ DFG + + G ++ S Y APEL F Y
Sbjct: 178 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 237
Query: 225 EVDVWSLGVILYTLVSGSLPFDG-STLRELRE--RVL--------------RGKYRIPFY 267
+DVWS G +L L+ G F G S + +L E +VL +++ P
Sbjct: 238 -IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI 296
Query: 268 ------------MSTDCENLLKKFLVLNPAKRAS 289
+ L + L P R +
Sbjct: 297 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 330
Score = 70.1 bits (172), Expect = 7e-13
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 16/109 (14%)
Query: 484 EKTLYLVMEYASGGEVFD---YLVLHGRMKEK----EARAKFR--QIVSAVQYCHQKKII 534
E L LV++Y Y V + K K Q+ ++ Y H I
Sbjct: 125 EVYLNLVLDY------VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 178
Query: 535 HRDLKAENLLLDSEMNI-KIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
HRD+K +NLLLD + + K+ DFG + + G ++ S Y APEL
Sbjct: 179 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 227
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 154 bits (392), Expect = 1e-42
Identities = 75/227 (33%), Positives = 114/227 (50%), Gaps = 26/227 (11%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLF-REVRIMKMLDHPNI 107
KLL+TIGKG F V L + G +VA+K + + + F E +M L H N+
Sbjct: 24 KLLQTIGKGEFGDVMLGDY--RGNKVAVK-----CIKNDATAQAFLAEASVMTQLRHSNL 76
Query: 108 VKLFQVIETEK-TLYLVMEYASGGEVFDYLVLHGRMKEKEAR-AKF-RQIVSAVQYCHQK 164
V+L VI EK LY+V EY + G + DYL GR KF + A++Y
Sbjct: 77 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 136
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPY--AAPELFQGK 219
+HRDL A N+L+ + K++DFG + + KL P APE + K
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-------PVKWTAPEALREK 189
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
K+ + DVWS G++L+ + S G +P+ L+++ RV +G Y++
Sbjct: 190 KFS-TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YKMD 234
Score = 72.2 bits (178), Expect = 4e-14
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 474 LLKLFQVIETEK-TLYLVMEYASGGEVFDYLVLHGRMKEKEAR-AKF-RQIVSAVQYCHQ 530
L++L VI EK LY+V EY + G + DYL GR KF + A++Y
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+L+ + K++DFG +
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLT 164
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 155 bits (394), Expect = 1e-42
Identities = 60/286 (20%), Positives = 102/286 (35%), Gaps = 56/286 (19%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKM--LDHPN 106
LL+ +GKG + +V G+ VA+KI + + FRE + L H N
Sbjct: 11 TLLECVGKGRYGEVWRGSW--QGENVAVKI-----FSSRDEKSWFRETELYNTVMLRHEN 63
Query: 107 IVKLF----QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYC 161
I+ + L+L+ Y G ++DYL + + + I S + +
Sbjct: 64 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHL 121
Query: 162 H--------QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD-----TFCGSP 208
H + I HRDLK++N+L+ IAD G + + G+
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181
Query: 209 PYAAPELFQGKKYDGPE-----VDVWSLGVILYTLVSGS----------LPFDG-----S 248
Y APE+ VD+W+ G++L+ + PF
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241
Query: 249 TLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL-------NPAKR 287
+ ++R+ V + R + L L NP+ R
Sbjct: 242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
Score = 90.5 bits (225), Expect = 4e-20
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 16/113 (14%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCH--------QKKIIHRD 537
L+L+ Y G ++DYL + + + I S + + H + I HRD
Sbjct: 81 LWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRD 138
Query: 538 LKAENLLLDSEMNIKIADFGFSNEFTPGNKLD-----TFCGSPPYAAPELFQG 585
LK++N+L+ IAD G + + G+ Y APE+
Sbjct: 139 LKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 154 bits (392), Expect = 2e-42
Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 29/249 (11%)
Query: 34 ESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAK-HVPTGKE--VAIKIIDKTQLNPGSLQ 90
+S E + +LL+ +G G+F V+ + P+GK VA+K + L+
Sbjct: 9 QSLTCLIGEKDL---RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM 65
Query: 91 KLF-REVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARA 149
F REV M LDH N+++L+ V+ + +V E A G + D L H +
Sbjct: 66 DDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS 124
Query: 150 KF-RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-------NEFTP--GN 199
++ Q+ + Y K+ IHRDL A NLLL + +KI DFG + +
Sbjct: 125 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 184
Query: 200 KLDTFCGSPPYA--APELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRER 256
K+ P+A APE + + + D W GV L+ + + G P+ G ++ +
Sbjct: 185 KV-------PFAWCAPESLKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 236
Query: 257 VLRGKYRIP 265
+ + R+P
Sbjct: 237 IDKEGERLP 245
Score = 75.4 bits (186), Expect = 5e-15
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
L++L+ V+ + +V E A G + D L H +++ Q+ + Y K+
Sbjct: 83 LIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
IHRDL A NLLL + +KI DFG
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLM 168
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 159 bits (403), Expect = 2e-42
Identities = 74/227 (32%), Positives = 114/227 (50%), Gaps = 26/227 (11%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLF-REVRIMKMLDHPNI 107
KLL+TIGKG F V L + G +VA+K + + + F E +M L H N+
Sbjct: 196 KLLQTIGKGEFGDVMLGDY--RGNKVAVKC-----IKNDATAQAFLAEASVMTQLRHSNL 248
Query: 108 VKLFQVI-ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEAR-AKF-RQIVSAVQYCHQK 164
V+L VI E + LY+V EY + G + DYL GR KF + A++Y
Sbjct: 249 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 308
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPY--AAPELFQGK 219
+HRDL A N+L+ + K++DFG + + KL P APE + K
Sbjct: 309 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-------PVKWTAPEALREK 361
Query: 220 KYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
K+ + DVWS G++L+ + S G +P+ L+++ RV +G Y++
Sbjct: 362 KFST-KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YKMD 406
Score = 73.9 bits (182), Expect = 5e-14
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 474 LLKLFQVI-ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEAR-AKF-RQIVSAVQYCHQ 530
L++L VI E + LY+V EY + G + DYL GR KF + A++Y
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPPY--AAPE 581
+HRDL A N+L+ + K++DFG + + KL P APE
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-------PVKWTAPE 356
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 159 bits (404), Expect = 3e-42
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 24/229 (10%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPG--SLQKLFREVRIMKMLDHPN 106
+ +G G + +V VA+K L +++ +E +MK + HPN
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKHPN 277
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEAR-AKF-RQIVSAVQYCHQK 164
+V+L V E Y++ E+ + G + DYL R + QI SA++Y +K
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 337
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTPGNKLDTFCGSPPY--AAPELFQ 217
IHR+L A N L+ +K+ADFG S + +T P APE
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-----AKFPIKWTAPESLA 392
Query: 218 GKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
K+ + DVW+ GV+L+ + + G P+ G L ++ E + + YR+
Sbjct: 393 YNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRME 439
Score = 76.3 bits (188), Expect = 9e-15
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEAR-AKF-RQIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + QI SA++Y +K
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 337
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFS 559
IHR+L A N L+ +K+ADFG S
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLS 365
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 154 bits (390), Expect = 5e-42
Identities = 67/286 (23%), Positives = 105/286 (36%), Gaps = 56/286 (19%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRI--MKMLDHPN 106
L ++IGKG F +V K G+EVA+KI + + FRE I ML H N
Sbjct: 6 VLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE-----RSWFREAEIYQTVMLRHEN 58
Query: 107 IVKLF----QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYC 161
I+ + T L+LV +Y G +FDYL + E K S + +
Sbjct: 59 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHL 116
Query: 162 HQK--------KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF-----CGSP 208
H + I HRDLK++N+L+ IAD G + G+
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176
Query: 209 PYAAPELFQGKKYDGPE-----VDVWSLGVILYTLVSGS----------LPFDG-----S 248
Y APE+ D++++G++ + + LP+
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236
Query: 249 TLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL-------NPAKR 287
++ E+R+ V K R L+ + N A R
Sbjct: 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 282
Score = 90.9 bits (226), Expect = 4e-20
Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQK--------KIIHRD 537
L+LV +Y G +FDYL + E K S + + H + I HRD
Sbjct: 76 LWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD 133
Query: 538 LKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF-----CGSPPYAAPELFQG 585
LK++N+L+ IAD G + G+ Y APE+
Sbjct: 134 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 186
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 153 bits (388), Expect = 7e-42
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 28/231 (12%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSL--QKLFREVRIMKMLDHPN 106
+ +G G + +V VA+K L ++ ++ +E +MK + HPN
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVK-----TLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEAR-AKF-RQIVSAVQYCHQK 164
+V+L V E Y++ E+ + G + DYL R + QI SA++Y +K
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPY--AAPEL 215
IHRDL A N L+ +K+ADFG S + +T G K P APE
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-------PIKWTAPES 183
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
K+ + DVW+ GV+L+ + + G P+ G L ++ E + + YR+
Sbjct: 184 LAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRME 232
Score = 75.0 bits (185), Expect = 6e-15
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEAR-AKF-RQIVSAVQYCHQK 531
L++L V E Y++ E+ + G + DYL R + QI SA++Y +K
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFS 559
IHRDL A N L+ +K+ADFG S
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLS 158
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 152 bits (386), Expect = 7e-42
Identities = 73/241 (30%), Positives = 118/241 (48%), Gaps = 31/241 (12%)
Query: 38 RERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSL--QKLFRE 95
E I LLK +G G F VKL K VA+K + GS+ + F+E
Sbjct: 3 MELKREEI---TLLKELGSGQFGVVKLGKWKGQYD-VAVK-----MIKEGSMSEDEFFQE 53
Query: 96 VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQI 154
+ M L HP +VK + V E +Y+V EY S G + +YL HG+ E + +
Sbjct: 54 AQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDV 113
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGS 207
+ + + IHRDL A N L+D ++ +K++DFG + +++ G K
Sbjct: 114 CEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF------ 167
Query: 208 PPY--AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
P +APE+F KY + DVW+ G++++ + S G +P+D T E+ +V +G +R+
Sbjct: 168 -PVKWSAPEVFHYFKYS-SKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG-HRL 224
Query: 265 P 265
Sbjct: 225 Y 225
Score = 75.3 bits (186), Expect = 4e-15
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
L+K + V E +Y+V EY S G + +YL HG+ E + + + + +
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ 124
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
IHRDL A N L+D ++ +K++DFG +
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMT 151
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 154 bits (390), Expect = 7e-42
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 16/237 (6%)
Query: 38 RERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGK----EVAIKIIDKTQLNPGSLQKLF 93
R E + + LK +G G F V +P G+ V IK+I + + S Q +
Sbjct: 8 RIFKETEL---RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI-EDKSGRQSFQAVT 63
Query: 94 REVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFR 152
+ + LDH +IV+L + +L LV +Y G + D++ H G + +
Sbjct: 64 DHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGV 122
Query: 153 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGS--P-P 209
QI + Y + ++HR+L A N+LL S +++ADFG ++ P +K + + P
Sbjct: 123 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 182
Query: 210 YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ A E KY + DVWS GV ++ L++ G+ P+ G L E+ + + +G R+
Sbjct: 183 WMALESIHFGKYT-HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG-ERLA 237
Score = 75.1 bits (185), Expect = 8e-15
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L + +L LV +Y G + D++ H G + + QI + Y +
Sbjct: 77 IVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
++HR+L A N+LL S +++ADFG +
Sbjct: 136 MVHRNLAARNVLLKSPSQVQVADFGVA 162
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 152 bits (386), Expect = 8e-42
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 28/230 (12%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSL--QKLFREVRIMKMLDHPN 106
++ IG G F V L + K VAIK + G++ + E +M L HP
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDK-VAIK-----TIREGAMSEEDFIEEAEVMMKLSHPK 64
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 165
+V+L+ V + + LV E+ G + DYL + E + + Y +
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPY--AAPELF 216
+IHRDL A N L+ IK++DFG + +++T G K P A+PE+F
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-------PVKWASPEVF 177
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+Y + DVWS GV+++ + S G +P++ + E+ E + G +R+
Sbjct: 178 SFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-FRLY 225
Score = 73.4 bits (181), Expect = 2e-14
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
L++L+ V + + LV E+ G + DYL + E + + Y +
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+IHRDL A N L+ IK++DFG +
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMT 151
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 155 bits (393), Expect = 9e-42
Identities = 72/297 (24%), Positives = 126/297 (42%), Gaps = 60/297 (20%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H N
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 107 IVKLFQVI------ETEKTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFR--QIVS 156
I+ L V E + +Y+VME + L +M+ R + Q++
Sbjct: 86 IIGLLNVFTPQKSLEEFQDVYIVMELMD----AN---LCQVIQMELDHERMSYLLYQMLC 138
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELF 216
+++ H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 217 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS-------------------TLRELRERV 257
G Y VD+WS+G I+ ++ G + F G+ +++L+ V
Sbjct: 199 LGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 257
Query: 258 ------LRGKYRIPF-----------------YMSTDCENLLKKFLVLNPAKRASLE 291
F ++ +LL K LV++ +KR S++
Sbjct: 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 314
Score = 65.5 bits (160), Expect = 2e-11
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFR--QIVSAVQYCHQKKIIHR 536
+E + +Y+VME + L +M+ R + Q++ +++ H IIHR
Sbjct: 99 LEEFQDVYIVMELMD----AN---LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 151
Query: 537 DLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
DLK N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 152 DLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 157 bits (398), Expect = 9e-42
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 12/222 (5%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+L +G+G F +V + T + VAIK + ++P + +E ++MK L H +V
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLV 242
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAK--FRQIVSAVQYCHQKKI 166
+L+ V+ +E+ +Y+V EY S G + D+L + + QI S + Y +
Sbjct: 243 QLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPY--AAPELFQGKKYDGP 224
+HRDL+A N+L+ + K+ADFG + P APE ++
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT-I 360
Query: 225 EVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ DVWS G++L L + G +P+ G RE+ ++V RG YR+P
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP 401
Score = 76.7 bits (189), Expect = 6e-15
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAK--FRQIVSAVQYCHQK 531
L++L+ V+ +E+ +Y+V EY S G + D+L + + QI S + Y +
Sbjct: 241 LVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL+A N+L+ + K+ADFG +
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 152 bits (387), Expect = 1e-41
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 52 KTIGKGNFAKVKLAKHVPTGKE--VAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVK 109
K +G GNF VK + VA+KI+ +P +L E +M+ LD+P IV+
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHR 169
+ + ++ LVME A G + YL + +K+K Q+ ++Y + +HR
Sbjct: 83 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 141
Query: 170 DLKAENLLLDSEMNIKIADFGFS-------NEFTP--GNKLDTFCGSPPY--AAPELFQG 218
DL A N+LL ++ KI+DFG S N + K P APE
Sbjct: 142 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-------PVKWYAPECINY 194
Query: 219 KKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
K+ + DVWS GV+++ S G P+ G E+ + +G R+
Sbjct: 195 YKFS-SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-ERMG 240
Score = 77.3 bits (191), Expect = 1e-15
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKI 533
++++ + ++ LVME A G + YL + +K+K Q+ ++Y +
Sbjct: 80 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF 138
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+LL ++ KI+DFG S
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLS 164
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 151 bits (385), Expect = 1e-41
Identities = 71/233 (30%), Positives = 116/233 (49%), Gaps = 34/233 (14%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSL--QKLFREVRIMKMLDHPN 106
KL++ +G G F +V + + K VA+K L GS+ E +MK L H
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTK-VAVK-----SLKQGSMSPDAFLAEANLMKQLQHQR 69
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEAR----AKFRQIVSAVQYCH 162
+V+L+ V+ T++ +Y++ EY G + D+L +K + A QI + +
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA--AQIAEGMAFIE 126
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPY--AAP 213
++ IHRDL+A N+L+ ++ KIADFG + NE+T G K P AP
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-------PIKWTAP 179
Query: 214 ELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
E + + DVWS G++L +V+ G +P+ G T E+ + + RG YR+
Sbjct: 180 EAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRMV 230
Score = 73.4 bits (181), Expect = 2e-14
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEAR----AKFRQIVSAVQYCH 529
L++L+ V+ T++ +Y++ EY G + D+L +K + A QI + +
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA--AQIAEGMAFIE 126
Query: 530 QKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
++ IHRDL+A N+L+ ++ KIADFG +
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLA 156
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 152 bits (387), Expect = 2e-41
Identities = 62/232 (26%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKE----VAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
K +K +G G F V +P G++ VAIK + + +P + +++ E +M +D+
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDN 76
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQ 163
P++ +L + T+ L+ + G + DY+ H + + QI + Y
Sbjct: 77 PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 164 KKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEF---TPGNKLDTFCGSP-PYAAPE 214
++++HRDL A N+L+ + ++KI DFG + E G K+ P + A E
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV------PIKWMALE 189
Query: 215 LFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ Y + DVWS GV ++ L++ GS P+DG E+ + +G R+P
Sbjct: 190 SILHRIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-ERLP 239
Score = 75.4 bits (186), Expect = 7e-15
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+ +L + T+ L+ + G + DY+ H + + QI + Y ++
Sbjct: 79 VCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
++HRDL A N+L+ + ++KI DFG +
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLA 164
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 152 bits (386), Expect = 3e-41
Identities = 79/279 (28%), Positives = 124/279 (44%), Gaps = 44/279 (15%)
Query: 19 SENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVP----TGKEV 74
+EN + S+ + + +E H+ K L+ +GKGNF V++ ++ P TG+ V
Sbjct: 17 TENLYFQGAMGSAFEDRDPTQFEERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVV 73
Query: 75 AIKIIDKTQLNPGS---LQKLFREVRIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASG 129
A+K +L + L+ RE+ I+K L H NIVK V + + L L+MEY
Sbjct: 74 AVK-----KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 128
Query: 130 GEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIAD 188
G + DYL H R+ + QI ++Y K+ IHRDL N+L+++E +KI D
Sbjct: 129 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 188
Query: 189 FGFSNEFTPGNKLDTFCGSPP------YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-- 240
FG + + + P + APE K+ DVWS GV+LY L +
Sbjct: 189 FGLTKVLPQDK--EYYKVKEPGESPIFWYAPESLTESKFS-VASDVWSFGVVLYELFTYI 245
Query: 241 --------------GSLPFDGSTLRELRERVLRGKYRIP 265
G+ + L E + R+P
Sbjct: 246 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-GRLP 283
Score = 76.3 bits (188), Expect = 4e-15
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 474 LLKLFQVIET--EKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQ 530
++K V + + L L+MEY G + DYL H R+ + QI ++Y
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFS 559
K+ IHRDL N+L+++E +KI DFG +
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLT 192
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 150 bits (382), Expect = 4e-41
Identities = 73/242 (30%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 39 ERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKE--VAIKIIDKTQLNPGSLQKLFREV 96
+RD I +L G GNF V+ + K+ VAIK++ K +++ RE
Sbjct: 7 KRDNLLIADIEL----GCGNFGSVRQGVYRMRKKQIDVAIKVL-KQGTEKADTEEMMREA 61
Query: 97 RIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIV 155
+IM LD+P IV+L V + L LVME A GG + +LV A+ Q+
Sbjct: 62 QIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVS 120
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-------NEFTP--GNKLDTFCG 206
++Y +K +HRDL A N+LL + KI+DFG S + +T K
Sbjct: 121 MGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW----- 175
Query: 207 SPPYA--APELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYR 263
P APE +K+ DVWS GV ++ +S G P+ E+ + +G R
Sbjct: 176 --PLKWYAPECINFRKFS-SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG-KR 231
Query: 264 IP 265
+
Sbjct: 232 ME 233
Score = 75.4 bits (186), Expect = 5e-15
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
+++L V + L LVME A GG + +LV A+ Q+ ++Y +K
Sbjct: 72 IVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+LL + KI+DFG S
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLS 157
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 150 bits (382), Expect = 4e-41
Identities = 77/260 (29%), Positives = 117/260 (45%), Gaps = 44/260 (16%)
Query: 38 RERDEPHIGKYKLLKTIGKGNFAKVKLAKHVP----TGKEVAIKIIDKTQLNPGS---LQ 90
+ +E H+ K L+ +GKGNF V++ ++ P TG+ VA+K +L + L+
Sbjct: 5 TQFEERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLR 56
Query: 91 KLFREVRIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLH-GRMKEKEA 147
RE+ I+K L H NIVK V + + L L+MEY G + DYL H R+ +
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
Query: 148 RAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGS 207
QI ++Y K+ IHRDL N+L+++E +KI DFG + + F
Sbjct: 117 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK--EFFKVK 174
Query: 208 PP------YAAPELFQGKKYDGPEVDVWSLGVILYTLVS----------------GSLPF 245
P + APE K+ DVWS GV+LY L + G+
Sbjct: 175 EPGESPIFWYAPESLTESKFS-VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 233
Query: 246 DGSTLRELRERVLRGKYRIP 265
+ L E + R+P
Sbjct: 234 GQMIVFHLIELLKNN-GRLP 252
Score = 75.8 bits (187), Expect = 3e-15
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 474 LLKLFQVIET--EKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQ 530
++K V + + L L+MEY G + DYL H R+ + QI ++Y
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFS 559
K+ IHRDL N+L+++E +KI DFG +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLT 161
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 151 bits (383), Expect = 6e-41
Identities = 58/305 (19%), Positives = 109/305 (35%), Gaps = 57/305 (18%)
Query: 30 SSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSL 89
SS + + +LL+ +G F V A+ + VA+KI
Sbjct: 9 SSGVDLGTENLYFQSM-PLQLLEVKARGRFGCVWKAQL--LNEYVAVKI-----FPIQDK 60
Query: 90 QKLFREVRI--MKMLDHPNIVKLF----QVIETEKTLYLVMEYASGGEVFDYLVLHGRMK 143
Q E + + + H NI++ + + L+L+ + G + D+L +
Sbjct: 61 QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL--KANVV 118
Query: 144 EKEARAKF-RQIVSAVQYCHQK----------KIIHRDLKAENLLLDSEMNIKIADFGFS 192
+ + Y H+ I HRD+K++N+LL + + IADFG +
Sbjct: 119 SWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178
Query: 193 NEFTPGNKLD---TFCGSPPYAAPELFQGKKYDGPE----VDVWSLGVILYTLVSGSLPF 245
+F G G+ Y APE+ +G + +D++++G++L+ L S
Sbjct: 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAA 238
Query: 246 DGS----------------TLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL------- 282
DG +L +++E V+ K R +
Sbjct: 239 DGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDH 298
Query: 283 NPAKR 287
+ R
Sbjct: 299 DAEAR 303
Score = 84.8 bits (210), Expect = 4e-18
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 16/114 (14%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQK----------KIIH 535
L+L+ + G + D+L + + + Y H+ I H
Sbjct: 97 LWLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISH 154
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD---TFCGSPPYAAPELFQGG 586
RD+K++N+LL + + IADFG + +F G G+ Y APE+ +G
Sbjct: 155 RDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGA 208
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 158 bits (400), Expect = 1e-40
Identities = 78/377 (20%), Positives = 144/377 (38%), Gaps = 42/377 (11%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVP-TGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH 104
G+Y++ I G + LA G+ V +K + + + E + + + H
Sbjct: 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGL-VHSGDAEAQAMAMAERQFLAEVVH 138
Query: 105 PNIVKLFQVIETE-----KTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQ 159
P+IV++F +E Y+VMEY G + ++ EA A +I+ A+
Sbjct: 139 PSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK--GQKLPVAEAIAYLLEILPALS 196
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGK 219
Y H +++ DLK EN++L E +K+ D G + G+P + APE+ +
Sbjct: 197 YLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFG---YLYGTPGFQAPEIVRT- 251
Query: 220 KYDGPEV--DVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLK 277
GP V D++++G L L +G + L E + LL+
Sbjct: 252 ---GPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVL--KTYDSY----GRLLR 302
Query: 278 KFLVLNPAKR-------------ASLEVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAPT 324
+ + +P +R EV + T P S+ + + T + A T
Sbjct: 303 RAIDPDPRQRFTTAEEMSAQLTGVLREVVAQDTGVPRPGLSTIFSPSRSTFGVDLLVAHT 362
Query: 325 NFKRQNTIDSASIKENTARLNAGRPAKNTASIAPLDTKALVGLGYSR-SEIEESLSQAKY 383
+ + + + N P + +A L S+ + +SL A++
Sbjct: 363 DVYLDGQVHAEKLTANEIVTALSVPLVDPTDVA---ASVLQATVLSQPVQTLDSLRAARH 419
Query: 384 DDPESDGSRSGSSLSLR 400
++DG S+ L
Sbjct: 420 GALDADGVDFSESVELP 436
Score = 84.9 bits (210), Expect = 3e-17
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 484 EKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENL 543
+ Y+VMEY G + ++ EA A +I+ A+ Y H +++ DLK EN+
Sbjct: 156 DPVGYIVMEYVGGQSLKRSK--GQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENI 213
Query: 544 LLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTS 591
+L E +K+ D G + G+P + APE+ + G V +
Sbjct: 214 MLTEE-QLKLIDLGAVSRINSFG---YLYGTPGFQAPEIVRTGPTVAT 257
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 150 bits (381), Expect = 1e-40
Identities = 73/253 (28%), Positives = 114/253 (45%), Gaps = 32/253 (12%)
Query: 38 RERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKE----VAIKIIDKTQLNPGSLQKLF 93
+ ++ K ++ +G+G+F KV L + PT VA+K + K P
Sbjct: 26 TVFHKRYL---KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADAGPQHRSGWK 81
Query: 94 REVRIMKMLDHPNIVKLFQVI--ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF 151
+E+ I++ L H +I+K +L LVMEY G + DYL H + +
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFA 140
Query: 152 RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN---KLDTFCGSP 208
+QI + Y H + IHRDL A N+LLD++ +KI DFG + G+ ++ SP
Sbjct: 141 QQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 200
Query: 209 -PYAAPELFQGKKYDGPEVDVWSLGVILYTLVS---------------GSLPFDGSTLRE 252
+ APE + K+ DVWS GV LY L++ + T+
Sbjct: 201 VFWYAPECLKEYKFY-YASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR 259
Query: 253 LRERVLRGKYRIP 265
L E + RG R+P
Sbjct: 260 LTELLERG-ERLP 271
Score = 74.7 bits (184), Expect = 1e-14
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 474 LLKLFQVI--ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 531
++K +L LVMEY G + DYL H + + +QI + Y H +
Sbjct: 95 IIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFS 559
IHRDL A N+LLD++ +KI DFG +
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLA 181
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 150 bits (381), Expect = 1e-40
Identities = 70/247 (28%), Positives = 110/247 (44%), Gaps = 29/247 (11%)
Query: 35 SSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKE---VAIKIIDKTQLNPGSLQK 91
S RE + I + K IG G+ +V + G+ VAIK + K +
Sbjct: 41 SFTREIEASRI---HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQRRD 96
Query: 92 LFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAK 150
E IM DHPNI++L V+ + +V EY G + +L H G+ +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
Query: 151 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGNKL 201
R + + ++Y +HRDL A N+L+DS + K++DFG S T G K+
Sbjct: 157 LRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI 216
Query: 202 DTFCGSPPY--AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVL 258
P APE + + DVWS GV+++ +++ G P+ T R++ V
Sbjct: 217 -------PIRWTAPEAIAFRTFS-SASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE 268
Query: 259 RGKYRIP 265
G YR+P
Sbjct: 269 EG-YRLP 274
Score = 77.0 bits (190), Expect = 2e-15
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ + +V EY G + +L H G+ + R + + ++Y
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+L+DS + K++DFG S
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLS 198
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 149 bits (378), Expect = 2e-40
Identities = 63/256 (24%), Positives = 112/256 (43%), Gaps = 36/256 (14%)
Query: 38 RERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKE----VAIKIIDKTQLNPGSLQKLF 93
++ + K ++ +G+G+F KV+L ++ P G VA+K + K + + L
Sbjct: 16 THFEKRFL---KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPESGGNHIADLK 71
Query: 94 REVRIMKMLDHPNIVKLFQVIETEKT--LYLVMEYASGGEVFDYLVLH-GRMKEKEARAK 150
+E+ I++ L H NIVK + + + L+ME+ G + +YL + ++ K+
Sbjct: 72 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY 131
Query: 151 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP- 209
QI + Y ++ +HRDL A N+L++SE +KI DFG + + +
Sbjct: 132 AVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK--EYYTVKDDR 189
Query: 210 -----YAAPELFQGKKYDGPEVDVWSLGVILYTLVS---------------GSLPFDGST 249
+ APE K+ DVWS GV L+ L++ T
Sbjct: 190 DSPVFWYAPECLMQSKFY-IASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMT 248
Query: 250 LRELRERVLRGKYRIP 265
+ L + G R+P
Sbjct: 249 VTRLVNTLKEG-KRLP 263
Score = 75.8 bits (187), Expect = 3e-15
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 474 LLKLFQVIETEKT--LYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQ 530
++K + + + L+ME+ G + +YL + ++ K+ QI + Y
Sbjct: 85 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFS 559
++ +HRDL A N+L++SE +KI DFG +
Sbjct: 145 RQYVHRDLAARNVLVESEHQVKIGDFGLT 173
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 148 bits (377), Expect = 2e-40
Identities = 64/238 (26%), Positives = 116/238 (48%), Gaps = 44/238 (18%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSL--QKLFREVRIMKMLDHPN 106
LK +G G F VK K +VAIK + GS+ + E ++M L H
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQ-YDVAIK-----MIKEGSMSEDEFIEEAKVMMNLSHEK 80
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF---------RQIVSA 157
+V+L+ V ++ ++++ EY + G + +YL +E R +F + + A
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYL--------REMRHRFQTQQLLEMCKDVCEA 132
Query: 158 VQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPY 210
++Y K+ +HRDL A N L++ + +K++DFG S +E+T G+K P
Sbjct: 133 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-------PV 185
Query: 211 --AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ PE+ K+ + D+W+ GV+++ + S G +P++ T E E + +G R+
Sbjct: 186 RWSPPEVLMYSKFS-SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLY 241
Score = 72.3 bits (178), Expect = 4e-14
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 17/95 (17%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF---------RQIVSA 524
L++L+ V ++ ++++ EY + G + +YL +E R +F + + A
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYL--------REMRHRFQTQQLLEMCKDVCEA 132
Query: 525 VQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
++Y K+ +HRDL A N L++ + +K++DFG S
Sbjct: 133 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 150 bits (381), Expect = 3e-40
Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 46/284 (16%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
Y +G G + V A +G++VAIK + + + ++ +RE+ ++K + H N
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 107 IVKLFQVI------ETEKTLYLVMEYASGGEVFD-YLVLHGRMKEKEARAKFRQIVSAVQ 159
++ L V YLVM + D ++ + E++ + Q++ ++
Sbjct: 85 VIGLLDVFTPASSLRNFYDFYLVMPFMQT----DLQKIMGLKFSEEKIQYLVYQMLKGLK 140
Query: 160 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQG- 218
Y H ++HRDLK NL ++ + +KI DFG + ++ + + Y APE+
Sbjct: 141 YIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSW 198
Query: 219 KKYDGPEVDVWSLGVILYTLVSGSLPFDG-STLRELRE---------------------- 255
Y+ VD+WS+G I+ +++G F G L +L +
Sbjct: 199 MHYN-QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257
Query: 256 ---RVLRGKYRIPFY-----MSTDCENLLKKFLVLNPAKRASLE 291
+ L R F S +LL+K L L+ KR +
Sbjct: 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAA 301
Score = 60.4 bits (147), Expect = 6e-10
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 481 IETEKTLYLVMEYASGGEVFD-YLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLK 539
+ YLVM + D ++ + E++ + Q++ ++Y H ++HRDLK
Sbjct: 98 LRNFYDFYLVMPFMQT----DLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLK 153
Query: 540 AENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
NL ++ + +KI DFG + ++ + + Y APE+
Sbjct: 154 PGNLAVNEDCELKILDFGLARHADA--EMTGYVVTRWYRAPEV 194
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 150 bits (382), Expect = 3e-40
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 53/288 (18%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ L +G G + V A TG VA+K + + + ++ +RE+R++K + H N
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 107 IVKLFQVI------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK---EARAKF--RQIV 155
++ L V E +YLV D L+ +K + + +F QI+
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGA----D---LNNIVKCQKLTDDHVQFLIYQIL 142
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE- 214
++Y H IIHRDLK NL ++ + +KI DFG + ++ + + Y APE
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD--EMTGYVATRWYRAPEI 200
Query: 215 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-STLRELRE------------------ 255
+ Y+ VD+WS+G I+ L++G F G + +L+
Sbjct: 201 MLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 256 -------RVLRGKYRIPFY-----MSTDCENLLKKFLVLNPAKRASLE 291
+ L ++ F + +LL+K LVL+ KR +
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Score = 60.0 bits (146), Expect = 9e-10
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEK---EARAKF--RQIVSAVQYCHQKKIIH 535
+E +YLV D L+ +K + + +F QI+ ++Y H IIH
Sbjct: 103 LEEFNDVYLVTHLMGA----D---LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 155
Query: 536 RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
RDLK NL ++ + +KI DFG + ++ + + Y APE+
Sbjct: 156 RDLKPSNLAVNEDCELKILDFGLARHTAD--EMTGYVATRWYRAPEI 200
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 147 bits (374), Expect = 4e-40
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 25/231 (10%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKE---VAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
+L + IG+G F V ++ VAIK K + +K +E M+ DHP
Sbjct: 18 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHP 76
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQK 164
+IVKL VI TE ++++ME + GE+ +L + + Q+ +A+ Y K
Sbjct: 77 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 135
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPP--YAAPEL 215
+ +HRD+ A N+L+ S +K+ DFG S + + KL P + APE
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-------PIKWMAPES 188
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+++ DVW GV ++ ++ G PF G ++ R+ G R+P
Sbjct: 189 INFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-ERLP 237
Score = 73.4 bits (181), Expect = 2e-14
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
++KL VI TE ++++ME + GE+ +L + + Q+ +A+ Y K+
Sbjct: 78 IVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 136
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRD+ A N+L+ S +K+ DFG S
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLS 163
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 153 bits (389), Expect = 6e-40
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 12/222 (5%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+L +G+G F +V + T + VAIK + ++P + +E ++MK L H +V
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLV 325
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAK--FRQIVSAVQYCHQKKI 166
+L+ V+ +E+ +Y+V EY S G + D+L + + QI S + Y +
Sbjct: 326 QLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 384
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPY--AAPELFQGKKYDGP 224
+HRDL+A N+L+ + K+ADFG + P APE ++
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT-I 443
Query: 225 EVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ DVWS G++L L + G +P+ G RE+ ++V RG YR+P
Sbjct: 444 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP 484
Score = 75.7 bits (186), Expect = 2e-14
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAK--FRQIVSAVQYCHQK 531
L++L+ V+ +E+ +Y+V EY S G + D+L + + QI S + Y +
Sbjct: 324 LVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL+A N+L+ + K+ADFG +
Sbjct: 383 NYVHRDLRAANILVGENLVCKVADFGLA 410
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 147 bits (373), Expect = 6e-40
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 23/230 (10%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKE---VAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
L + +G+G F +V + E VA+K K + +K E IMK LDHP
Sbjct: 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC-KKDCTLDNKEKFMSEAVIMKNLDHP 73
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQK 164
+IVKL +I E+ +++ME GE+ YL + +K QI A+ Y
Sbjct: 74 HIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 132
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSP-PYAAPELF 216
+HRD+ N+L+ S +K+ DFG S ++ +L P + +PE
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL------PIKWMSPESI 186
Query: 217 QGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+++ DVW V ++ ++S G PF +++ + +G R+P
Sbjct: 187 NFRRFT-TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG-DRLP 234
Score = 72.6 bits (179), Expect = 3e-14
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
++KL +I E+ +++ME GE+ YL + +K QI A+ Y
Sbjct: 75 IVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN 133
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRD+ N+L+ S +K+ DFG S
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLS 160
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 149 bits (378), Expect = 7e-40
Identities = 75/308 (24%), Positives = 121/308 (39%), Gaps = 64/308 (20%)
Query: 39 ERDEPHIG-KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVR 97
+R +I ++L +G+G + V A H PTG+ VAIK I+ P + RE++
Sbjct: 3 KRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIK 61
Query: 98 IMKMLDHPNIVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK---EARA 149
I+K H NI+ +F + E +Y++ E D LH + + +
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT----D---LHRVISTQMLSDDHI 114
Query: 150 KF--RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGS 207
++ Q + AV+ H +IHRDLK NLL++S ++K+ DFG + ++
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 208 PP-----------YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS------- 248
Y APE + KY +DVWS G IL L F G
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYS-RAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
Query: 249 ---------TLRELRERV-----------LRGKYRIPFY-----MSTDCENLLKKFLVLN 283
+ L P ++ +LL++ LV +
Sbjct: 234 LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD 293
Query: 284 PAKRASLE 291
PAKR + +
Sbjct: 294 PAKRITAK 301
Score = 60.0 bits (146), Expect = 1e-09
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--- 576
Q + AV+ H +IHRDLK NLL++S ++K+ DFG + ++
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 577 --------YAAPEL 582
Y APE+
Sbjct: 180 VEFVATRWYRAPEV 193
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 148 bits (376), Expect = 9e-40
Identities = 66/286 (23%), Positives = 105/286 (36%), Gaps = 56/286 (19%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKM--LDHPN 106
L ++IGKG F +V K G+EVA+KI + + FRE I + L H N
Sbjct: 45 VLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE-----RSWFREAEIYQTVMLRHEN 97
Query: 107 IVKLF----QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYC 161
I+ + T L+LV +Y G +FDYL + E K S + +
Sbjct: 98 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHL 155
Query: 162 HQK--------KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF-----CGSP 208
H + I HRDLK++N+L+ IAD G + G+
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 215
Query: 209 PYAAPELFQGKKYDGPE-----VDVWSLGVILYTLVSGS----------LPFDG-----S 248
Y APE+ D++++G++ + + LP+
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 275
Query: 249 TLRELRERVLRGKYRIPFYMSTDCENLLKKFLVL-------NPAKR 287
++ E+R+ V K R L+ + N A R
Sbjct: 276 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 321
Score = 86.8 bits (215), Expect = 1e-18
Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQK--------KIIHRD 537
L+LV +Y G +FDYL + E K S + + H + I HRD
Sbjct: 115 LWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD 172
Query: 538 LKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF-----CGSPPYAAPELFQG 585
LK++N+L+ IAD G + G+ Y APE+
Sbjct: 173 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 225
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 151 bits (383), Expect = 1e-39
Identities = 73/293 (24%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y+ LK IG G V A + VAIK + + N ++ +RE+ +MK ++H N
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 122
Query: 107 IVKLFQVI------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQY 160
I+ L V E + +YLVME + V+ + + Q++ +++
Sbjct: 123 IISLLNVFTPQKTLEEFQDVYLVMELM---DANLCQVIQMELDHERMSYLLYQMLCGIKH 179
Query: 161 CHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKK 220
H IIHRDLK N+++ S+ +KI DFG + + + + Y APE+ G
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 239
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDGS-------------------TLRELRERV---- 257
Y VD+WS+G I+ +V + F G +++L+ V
Sbjct: 240 YK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 298
Query: 258 --LRGKYRIPF-----------------YMSTDCENLLKKFLVLNPAKRASLE 291
+ F ++ +LL K LV++PAKR S++
Sbjct: 299 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 351
Score = 65.3 bits (159), Expect = 3e-11
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKA 540
+E + +YLVME + V+ + + Q++ +++ H IIHRDLK
Sbjct: 136 LEEFQDVYLVMELM---DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
Query: 541 ENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPEL 582
N+++ S+ +KI DFG + + + + Y APE+
Sbjct: 193 SNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 147 bits (374), Expect = 1e-39
Identities = 64/284 (22%), Positives = 112/284 (39%), Gaps = 52/284 (18%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
+++K IGKG + +V + K G++VA+K+ T+ + E+ ++ H NI+
Sbjct: 40 QMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENIL 94
Query: 109 KLF----QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQ 163
+ + LYL+ +Y G ++DYL + ++ K VS + + H
Sbjct: 95 GFIAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCHLHT 152
Query: 164 K--------KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF-----CGSPPY 210
+ I HRDLK++N+L+ IAD G + +F G+ Y
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRY 212
Query: 211 AAPELFQGKKYDGPE-----VDVWSLGVILYTLVSGS----------LPFDG-----STL 250
PE+ D++S G+IL+ + LP+ +
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSY 272
Query: 251 RELRERVLRGKYRIPFYMSTDCENLLKKFLVL-------NPAKR 287
++RE V K R F + L++ L NPA R
Sbjct: 273 EDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASR 316
Score = 87.9 bits (218), Expect = 5e-19
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 16/117 (13%)
Query: 483 TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQK--------KI 533
+ LYL+ +Y G ++DYL + ++ K VS + + H + I
Sbjct: 106 SWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAI 163
Query: 534 IHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF-----CGSPPYAAPELFQG 585
HRDLK++N+L+ IAD G + +F G+ Y PE+
Sbjct: 164 AHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE 220
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 151 bits (382), Expect = 1e-39
Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 26/229 (11%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIV 108
KL K +G G F +V +A + K VA+K + ++ + E +MK L H +V
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSV---EAFLAEANVMKTLQHDKLV 246
Query: 109 KLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEAR-AKF-RQIVSAVQYCHQKKI 166
KL V+ T++ +Y++ E+ + G + D+L K+ + F QI + + Q+
Sbjct: 247 KLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 305
Query: 167 IHRDLKAENLLLDSEMNIKIADFGFS-----NEFTP--GNKLDTFCGSPPY--AAPELFQ 217
IHRDL+A N+L+ + + KIADFG + NE+T G K P APE
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-------PIKWTAPEAIN 358
Query: 218 GKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ + DVWS G++L +V+ G +P+ G + E+ + RG YR+P
Sbjct: 359 FGSFT-IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMP 405
Score = 74.4 bits (183), Expect = 4e-14
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEAR-AKF-RQIVSAVQYCHQK 531
L+KL V+ T++ +Y++ E+ + G + D+L K+ + F QI + + Q+
Sbjct: 245 LVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFS 559
IHRDL+A N+L+ + + KIADFG +
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLA 331
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 146 bits (371), Expect = 3e-39
Identities = 75/254 (29%), Positives = 113/254 (44%), Gaps = 33/254 (12%)
Query: 38 RERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKE----VAIKIIDKTQLNPGSLQKLF 93
+E H+ K + +GKGNF V+L ++ P G VA+K + + P +
Sbjct: 18 TIFEERHL---KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQ 72
Query: 94 REVRIMKMLDHPNIVKLFQVIET--EKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAK 150
RE++I+K L IVK V ++L LVMEY G + D+L H R+
Sbjct: 73 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 132
Query: 151 FRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGN---KLDTFCGS 207
QI ++Y ++ +HRDL A N+L++SE ++KIADFG + + S
Sbjct: 133 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 192
Query: 208 P-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF--------------DGSTLR 251
P + APE + + DVWS GV+LY L + D L
Sbjct: 193 PIFWYAPESLSDNIFS-RQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALS 251
Query: 252 ELRERVLRGKYRIP 265
L E + G R+P
Sbjct: 252 RLLELLEEG-QRLP 264
Score = 75.1 bits (185), Expect = 8e-15
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 474 LLKLFQVIET--EKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQ 530
++K V ++L LVMEY G + D+L H R+ QI ++Y
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 531 KKIIHRDLKAENLLLDSEMNIKIADFGFS 559
++ +HRDL A N+L++SE ++KIADFG +
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLA 174
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 151 bits (384), Expect = 8e-39
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKE---VAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
+L + IG+G F V ++ VAIK K + +K +E M+ DHP
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHP 451
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQK 164
+IVKL VI TE ++++ME + GE+ +L + + Q+ +A+ Y K
Sbjct: 452 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK 510
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTPGNKLDTFCGSPP--YAAPELFQ 217
+ +HRD+ A N+L+ S +K+ DFG S + + +K G P + APE
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK-----GKLPIKWMAPESIN 565
Query: 218 GKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+++ DVW GV ++ ++ G PF G ++ R+ G R+P
Sbjct: 566 FRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-ERLP 612
Score = 76.0 bits (187), Expect = 2e-14
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
++KL VI TE ++++ME + GE+ +L + + Q+ +A+ Y K+
Sbjct: 453 IVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 511
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRD+ A N+L+ S +K+ DFG S
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLS 538
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 145 bits (369), Expect = 1e-38
Identities = 76/315 (24%), Positives = 123/315 (39%), Gaps = 60/315 (19%)
Query: 26 SRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQ 83
+MS ++ ER + ++++ + G+G F V+L K TG VAIK + D
Sbjct: 3 GSMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF 62
Query: 84 LNPGSLQKLFREVRIMKML---DHPNIVKLFQVIETEKT-------LYLVMEY--ASGGE 131
N RE++IM+ L HPNIV+L T L +VMEY +
Sbjct: 63 RN--------RELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHR 114
Query: 132 VFDYLVLHG-RMKEKEARAKFRQIVSAVQYCHQK--KIIHRDLKAENLLLDSEMN-IKIA 187
+ Q++ ++ H + HRD+K N+L++ +K+
Sbjct: 115 CCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLC 174
Query: 188 DFGFSNEFTPGNKLDTFCGSPPYAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 246
DFG + + +P + S Y APEL F + Y VD+WS+G I ++ G F
Sbjct: 175 DFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYT-TAVDIWSVGCIFAEMMLGEPIFR 233
Query: 247 G-STLRELRE--RVL------------RGKYRIPFY-----------------MSTDCEN 274
G ++ +L E RVL + Y + + +
Sbjct: 234 GDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYD 293
Query: 275 LLKKFLVLNPAKRAS 289
LL L P +R
Sbjct: 294 LLSALLQYLPEERMK 308
Score = 58.8 bits (143), Expect = 2e-09
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 520 QIVSAVQYCHQK--KIIHRDLKAENLLLDSEMN-IKIADFGFSNEFTPGNKLDTFCGSPP 576
Q++ ++ H + HRD+K N+L++ +K+ DFG + + +P + S
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY 196
Query: 577 YAAPEL 582
Y APEL
Sbjct: 197 YRAPEL 202
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 145 bits (369), Expect = 2e-38
Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 53/288 (18%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
Y+ L+ +G G + V A TG +VAIK + + + ++ +RE+R++K + H N
Sbjct: 26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHEN 85
Query: 107 IVKLFQVI------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK---EARAKF--RQIV 155
++ L V + YLVM + D L MK + E R +F Q++
Sbjct: 86 VIGLLDVFTPDETLDDFTDFYLVMPFMGT----D---LGKLMKHEKLGEDRIQFLVYQML 138
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPE- 214
++Y H IIHRDLK NL ++ + +KI DFG + + ++ + + Y APE
Sbjct: 139 KGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS--EMTGYVVTRWYRAPEV 196
Query: 215 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-STLRELRE------------------ 255
+ +Y VD+WS+G I+ +++G F G L +L+E
Sbjct: 197 ILNWMRYT-QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255
Query: 256 -------RVLRGKYRIPFY-----MSTDCENLLKKFLVLNPAKRASLE 291
+ L + F S NLL+K LVL+ +R +
Sbjct: 256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAG 303
Score = 57.3 bits (139), Expect = 7e-09
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEK---EARAKF--RQIVSAVQYCHQKKIIH 535
++ YLVM + D L MK + E R +F Q++ ++Y H IIH
Sbjct: 99 LDDFTDFYLVMPFMGT----D---LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIH 151
Query: 536 RDLKAENLLLDSEMNIKIADFGFS 559
RDLK NL ++ + +KI DFG +
Sbjct: 152 RDLKPGNLAVNEDCELKILDFGLA 175
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 146 bits (369), Expect = 2e-38
Identities = 77/316 (24%), Positives = 120/316 (37%), Gaps = 81/316 (25%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
KY L KT+G G+F V + +GK A+K K +P + RE+ IMK+LDH N
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALK---KVLQDP---RYKNRELDIMKVLDHVN 61
Query: 107 IVKLFQVI--------------------------------------ETEKTLYLVMEYAS 128
I+KL K L ++MEY
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV- 120
Query: 129 GGEVFDYLVLHGRMKEK--EARAKFR--QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI 184
+ L R Q+ AV + H I HRD+K +NLL++S+ N
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT 180
Query: 185 -KIADFGFSNEFTPGNKLDTFCGSPPYAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSGS 242
K+ DFG + + P + S Y APEL +Y P +D+WS+G + L+ G
Sbjct: 181 LKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYT-PSIDLWSIGCVFGELILGK 239
Query: 243 LPFDG-STLRELRE--RVL--------------RGKYRIPFY------------MSTDCE 273
F G +++ +L +++ + R P +
Sbjct: 240 PLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAI 299
Query: 274 NLLKKFLVLNPAKRAS 289
+LL++ L P R +
Sbjct: 300 DLLEQILRYEPDLRIN 315
Score = 67.8 bits (166), Expect = 3e-12
Identities = 33/138 (23%), Positives = 51/138 (36%), Gaps = 6/138 (4%)
Query: 450 RGVHRSISASNAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRM 509
+ K + + + K L ++MEY + L R
Sbjct: 76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV-PDTLHKVLKSFIRS 134
Query: 510 KEK--EARAKFR--QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI-KIADFGFSNEFTP 564
Q+ AV + H I HRD+K +NLL++S+ N K+ DFG + + P
Sbjct: 135 GRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIP 194
Query: 565 GNKLDTFCGSPPYAAPEL 582
+ S Y APEL
Sbjct: 195 SEPSVAYICSRFYRAPEL 212
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 145 bits (368), Expect = 2e-38
Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 29/244 (11%)
Query: 38 RERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKE---VAIKIIDKTQLNPGSLQKLFR 94
+E D +I + K +G G F +V + K+ VAIK + K +
Sbjct: 40 KELDATNI---SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG 95
Query: 95 EVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQ 153
E IM DHPNI++L V+ K + +V EY G + +L H + + R
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGNKLDTF 204
I S ++Y +HRDL A N+L++S + K++DFG T G K+
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI--- 212
Query: 205 CGSPPY--AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
P +PE +K+ DVWS G++L+ ++S G P+ + +++ + V G
Sbjct: 213 ----PIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG- 266
Query: 262 YRIP 265
YR+P
Sbjct: 267 YRLP 270
Score = 74.3 bits (183), Expect = 2e-14
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLH-GRMKEKEARAKFRQIVSAVQYCHQKK 532
+++L V+ K + +V EY G + +L H + + R I S ++Y
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+L++S + K++DFG
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLG 194
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 145 bits (367), Expect = 3e-38
Identities = 76/291 (26%), Positives = 120/291 (41%), Gaps = 55/291 (18%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y L IG+G + V A VAIK I + + Q+ RE++I+ H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 86
Query: 107 IVKLFQVI-----ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK---EARAKF--RQIVS 156
I+ + +I E K +Y+V + D L+ +K + + QI+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMET----D---LYKLLKTQHLSNDHICYFLYQILR 139
Query: 157 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF----CGSPPYAA 212
++Y H ++HRDLK NLLL++ ++KI DFG + P + F + Y A
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 213 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-STLRELRE--------------- 255
PE + K Y +D+WS+G IL ++S F G L +L
Sbjct: 200 PEIMLNSKGYT-KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 256 ----------RVLRGKYRIPFY-----MSTDCENLLKKFLVLNPAKRASLE 291
L K ++P+ + +LL K L NP KR +E
Sbjct: 259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Score = 56.9 bits (138), Expect = 8e-09
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTF----CGSP 575
QI+ ++Y H ++HRDLK NLLL++ ++KI DFG + P + F +
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 576 PYAAPEL 582
Y APE+
Sbjct: 196 WYRAPEI 202
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 149 bits (378), Expect = 3e-38
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 30/249 (12%)
Query: 32 RRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKE--VAIKIIDKTQLNPGSL 89
+ + +RD I +L G GNF V+ + K+ VAIK++ K
Sbjct: 326 KDKKLFLKRDNLLIADIEL----GCGNFGSVRQGVYRMRKKQIDVAIKVL-KQGTEKADT 380
Query: 90 QKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARA 149
+++ RE +IM LD+P IV+L V + L LVME A GG + +LV A
Sbjct: 381 EEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVA 439
Query: 150 KF-RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-------NEFTP--GN 199
+ Q+ ++Y +K +HR+L A N+LL + KI+DFG S + +T
Sbjct: 440 ELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499
Query: 200 KLDTFCGSPPYA--APELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRER 256
K P APE +K+ DVWS GV ++ +S G P+ E+
Sbjct: 500 KW-------PLKWYAPECINFRKFS-SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 551
Query: 257 VLRGKYRIP 265
+ +G R+
Sbjct: 552 IEQG-KRME 559
Score = 75.0 bits (184), Expect = 4e-14
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
+++L V + L LVME A GG + +LV A+ Q+ ++Y +K
Sbjct: 398 IVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HR+L A N+LL + KI+DFG S
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLS 483
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 144 bits (364), Expect = 4e-38
Identities = 64/249 (25%), Positives = 102/249 (40%), Gaps = 38/249 (15%)
Query: 38 RERDEPHIGKYKLLKTIGKGNFAKVKLAK-HVPTGKE---VAIKIIDKTQLNPGS----L 89
E + K IG G F +V +GK+ VAIK L G
Sbjct: 39 TEIHPSCV---TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIK-----TLKAGYTEKQR 90
Query: 90 QKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARA 149
E IM H NI++L VI K + ++ EY G + +L
Sbjct: 91 VDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLV 150
Query: 150 KF-RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF---------TPGN 199
R I + ++Y +HRDL A N+L++S + K++DFG S T G
Sbjct: 151 GMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGG 210
Query: 200 KLDTFCGSPPY--AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRER 256
K+ P APE +K+ DVWS G++++ +++ G P+ + E+ +
Sbjct: 211 KI-------PIRWTAPEAISYRKFT-SASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA 262
Query: 257 VLRGKYRIP 265
+ G +R+P
Sbjct: 263 INDG-FRLP 270
Score = 74.7 bits (184), Expect = 1e-14
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
+++L VI K + ++ EY G + +L R I + ++Y
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+HRDL A N+L++S + K++DFG S
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLS 194
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 144 bits (366), Expect = 4e-38
Identities = 67/320 (20%), Positives = 112/320 (35%), Gaps = 66/320 (20%)
Query: 29 MSSRRESSRRERDEP--HIG-KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQL- 84
M ++ E++ R+ + Y + + I G++ V G VAIK + T
Sbjct: 2 MQAKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSD 60
Query: 85 --------NPGSLQKLFREVRIMKMLDHPNIVKLFQVI-----ETEKTLYLVMEYASGGE 131
+ +++ RE+R++ HPNI+ L + LYLV E
Sbjct: 61 GRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR--- 117
Query: 132 VFDYLVLH-----GRMKEKEARAKF--RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNI 184
D L R+ ++ I+ + H+ ++HRDL N+LL +I
Sbjct: 118 -TD---LAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDI 173
Query: 185 KIADFGFSNEFTPGNKLDTFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSL 243
I DF + E T + Y APE + Q K + VD+WS G ++ + +
Sbjct: 174 TICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFT-KLVDMWSAGCVMAEMFNRKA 232
Query: 244 PFDG-STLRELR--------------------------ERVLRGKYRIPFY-----MSTD 271
F G + +L L +
Sbjct: 233 LFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPV 292
Query: 272 CENLLKKFLVLNPAKRASLE 291
+L+ K L NP +R S E
Sbjct: 293 ALDLIAKMLEFNPQRRISTE 312
Score = 61.9 bits (151), Expect = 2e-10
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAA 579
I+ + H+ ++HRDL N+LL +I I DF + E T + Y A
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRA 201
Query: 580 PEL 582
PEL
Sbjct: 202 PEL 204
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 143 bits (361), Expect = 7e-38
Identities = 62/307 (20%), Positives = 109/307 (35%), Gaps = 69/307 (22%)
Query: 41 DEPHI--GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRI 98
EP + KLL+ IG+G + V + VA+K+ + + Q E I
Sbjct: 6 SEPSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKV-----FSFANRQNFINEKNI 58
Query: 99 MKM--LDHPNIVKLF-----QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF 151
++ ++H NI + + LVMEY G + YL LH +
Sbjct: 59 YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLA 117
Query: 152 RQIVSAVQYCH---------QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLD 202
+ + Y H + I HRDL + N+L+ ++ I+DFG S T +
Sbjct: 118 HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVR 177
Query: 203 ---------TFCGSPPYAAPELFQGK------KYDGPEVDVWSLGVILYTLVSGS----- 242
+ G+ Y APE+ +G + +VD+++LG+I + +
Sbjct: 178 PGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237
Query: 243 --------LPFDGS-----TLRELRERVLRGKYR--IPFYMSTDCENLLKKFLVL----- 282
+ F T +++ V R K R P + ++
Sbjct: 238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSL-AVRSLKETIEDCW 296
Query: 283 --NPAKR 287
+ R
Sbjct: 297 DQDAEAR 303
Score = 84.9 bits (210), Expect = 5e-18
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 19/118 (16%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH---------QKKIIHRD 537
LVMEY G + YL LH + + + Y H + I HRD
Sbjct: 87 YLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRD 145
Query: 538 LKAENLLLDSEMNIKIADFGFSNEFTPGNKLD---------TFCGSPPYAAPELFQGG 586
L + N+L+ ++ I+DFG S T + + G+ Y APE+ +G
Sbjct: 146 LNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGA 203
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 141 bits (358), Expect = 1e-37
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 17/238 (7%)
Query: 39 ERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKE---VAIKIIDKTQLNPGSLQKLFRE 95
+ + IG+G+F V + + A+K + + G + + E
Sbjct: 21 GPSSLIV---HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTE 76
Query: 96 VRIMKMLDHPNIVKLFQVI-ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQ 153
IMK HPN++ L + +E + +V+ Y G++ +++ + F Q
Sbjct: 77 GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 136
Query: 154 IVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS---NEFTPGNKLDTFCGSPP- 209
+ ++Y KK +HRDL A N +LD + +K+ADFG + + + + P
Sbjct: 137 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 196
Query: 210 -YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ A E Q +K+ + DVWS GV+L+ L++ G+ P+ ++ +L+G R+
Sbjct: 197 KWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-RRLL 252
Score = 71.5 bits (176), Expect = 9e-14
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 480 VIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKIIHRDL 538
+ +E + +V+ Y G++ +++ + F Q+ ++Y KK +HRDL
Sbjct: 95 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDL 154
Query: 539 KAENLLLDSEMNIKIADFGFS 559
A N +LD + +K+ADFG +
Sbjct: 155 AARNCMLDEKFTVKVADFGLA 175
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 140 bits (356), Expect = 1e-37
Identities = 51/236 (21%), Positives = 93/236 (39%), Gaps = 27/236 (11%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGK-------EVAIKIIDKTQLNPGSLQKLFREVRIMKM 101
+++G+G F K+ G EV +K++DK N + F +M
Sbjct: 11 IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNY--SESFFEAASMMSK 68
Query: 102 LDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQY 160
L H ++V + V LV E+ G + YL + + + +Q+ +A+ +
Sbjct: 69 LSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHF 128
Query: 161 CHQKKIIHRDLKAENLLLDSEMN--------IKIADFGFSNEFTPGNKLDTFCGSP-PYA 211
+ +IH ++ A+N+LL E + IK++D G S P P+
Sbjct: 129 LEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP----KDILQERIPWV 184
Query: 212 APE-LFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
PE + K + D WS G L+ + S G P + + +++P
Sbjct: 185 PPECIENPKNLN-LATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR-HQLP 238
Score = 66.2 bits (162), Expect = 5e-12
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKK 532
L+ + V LV E+ G + YL + + + +Q+ +A+ + +
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT 133
Query: 533 IIHRDLKAENLLLDSEMN--------IKIADFGFS 559
+IH ++ A+N+LL E + IK++D G S
Sbjct: 134 LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 144 bits (365), Expect = 2e-37
Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 45/269 (16%)
Query: 7 RYSTGKSETGRGSENNISSSRLMSSRRESSRRERDEP--HIG-KYKLLKTIGKGNFAKVK 63
++++G T GS+ + S + ++ R I +Y++ IG G++ V
Sbjct: 11 QHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVC 70
Query: 64 LAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETE-----K 118
A + VAIK I + + +++ RE+ I+ L+H ++VK+ ++ +
Sbjct: 71 EAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130
Query: 119 TLYLVMEYASGGEVFD-YLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIHRDLKAEN 175
LY+V+E A D + + E K ++ V+Y H I+HRDLK N
Sbjct: 131 ELYVVLEIADS----DFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPAN 186
Query: 176 LLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP-------------------------- 209
L++ + ++K+ DFG + ++ P
Sbjct: 187 CLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVT 246
Query: 210 --YAAPE-LFQGKKYDGPEVDVWSLGVIL 235
Y APE + + Y +DVWS+G I
Sbjct: 247 RWYRAPELILLQENYT-EAIDVWSIGCIF 274
Score = 66.0 bits (161), Expect = 2e-11
Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 7/122 (5%)
Query: 481 IETEKTLYLVMEYASGGEVFD-YLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIHRD 537
+E LY+V+E A D + + E K ++ V+Y H I+HRD
Sbjct: 126 VEKFDELYVVLEIADS----DFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRD 181
Query: 538 LKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGGAPVTSSGGAGT 597
LK N L++ + ++K+ DFG + ++ P + T
Sbjct: 182 LKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLT 241
Query: 598 NH 599
H
Sbjct: 242 GH 243
Score = 30.6 bits (69), Expect = 1.8
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Query: 256 RVLRGKYRIPFY-----MSTDCENLLKKFLVLNPAKRASLE 291
R+ + S D +LLK+ LV NP KR ++
Sbjct: 352 RIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITIN 392
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 142 bits (359), Expect = 9e-37
Identities = 75/354 (21%), Positives = 124/354 (35%), Gaps = 97/354 (27%)
Query: 30 SSRRESSRRERDEPHIG-KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGS 88
S R + H+ Y + IG+G++ V LA T K VAIK +++ +
Sbjct: 9 SGRENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLID 68
Query: 89 LQKLFREVRIMKMLDHPNIVKLFQVI-----ETEKTLYLVMEYASGGEVFD-YLVLHGRM 142
+++ RE+ I+ L I++L+ +I LY+V+E A D + +
Sbjct: 69 CKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADS----DLKKLFKTPI 124
Query: 143 KEKEARAKF--RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFG----FSNEFT 196
E K ++ + H+ IIHRDLK N LL+ + ++K+ DFG ++E
Sbjct: 125 FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKD 184
Query: 197 PGNKLDTFCGSPP-------------------YAAPE-LFQGKKYDGPEVDVWSLGVILY 236
D P Y APE + + Y +D+WS G I
Sbjct: 185 TNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYT-KSIDIWSTGCIFA 243
Query: 237 TLVSGSLP-----------FDGSTLRELRE------------------------------ 255
L++ F GS+ L
Sbjct: 244 ELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDD 303
Query: 256 -------------RVLRGKYRIPFY-----MSTDCENLLKKFLVLNPAKRASLE 291
++ + I +S D NLL+ L NP KR +++
Sbjct: 304 LKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITID 357
Score = 60.5 bits (147), Expect = 9e-10
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 485 KTLYLVMEYASGGEVFD-YLVLHGRMKEKEARAKF--RQIVSAVQYCHQKKIIHRDLKAE 541
LY+V+E A D + + E K ++ + H+ IIHRDLK
Sbjct: 103 DELYIVLEIADS----DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPA 158
Query: 542 NLLLDSEMNIKIADFG 557
N LL+ + ++K+ DFG
Sbjct: 159 NCLLNQDCSVKVCDFG 174
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 139 bits (352), Expect = 1e-36
Identities = 71/300 (23%), Positives = 123/300 (41%), Gaps = 65/300 (21%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPN 106
+Y LK +G G V A K VAIK I +P S++ RE++I++ LDH N
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI--VLTDPQSVKHALREIKIIRRLDHDN 69
Query: 107 IVKLFQVI--------------ETEKTLYLVMEYASGGEVFDYLVLHGRMKEK---EARA 149
IVK+F+++ ++Y+V EY D L +++ E A
Sbjct: 70 IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET----D---LANVLEQGPLLEEHA 122
Query: 150 KF--RQIVSAVQYCHQKKIIHRDLKAENLLLDSE-MNIKIADFG----FSNEFTPGNKLD 202
+ Q++ ++Y H ++HRDLK NL +++E + +KI DFG ++ L
Sbjct: 123 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 203 TFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS------------- 248
+ Y +P L Y +D+W+ G I +++G F G+
Sbjct: 183 EGLVTKWYRSPRLLLSPNNYT-KAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI 241
Query: 249 ------TLRELRERV------LRGKYRIPFY-----MSTDCENLLKKFLVLNPAKRASLE 291
+EL + + P +S + + L++ L +P R + E
Sbjct: 242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAE 301
Score = 56.5 bits (137), Expect = 9e-09
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 17/112 (15%)
Query: 481 IETEKTLYLVMEYASGGEVFDYLVLHGRMKEK---EARAKF--RQIVSAVQYCHQKKIIH 535
+ ++Y+V EY D L +++ E A+ Q++ ++Y H ++H
Sbjct: 91 LTELNSVYIVQEYMET----D---LANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLH 143
Query: 536 RDLKAENLLLDSE-MNIKIADFG----FSNEFTPGNKLDTFCGSPPYAAPEL 582
RDLK NL +++E + +KI DFG ++ L + Y +P L
Sbjct: 144 RDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRL 195
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 138 bits (350), Expect = 1e-36
Identities = 60/241 (24%), Positives = 111/241 (46%), Gaps = 23/241 (9%)
Query: 38 RERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKE---VAIKIIDKTQLNPGSLQKLFR 94
ER H + IGKG+F V +++ + AIK + ++ R
Sbjct: 18 HERVVTHSDR-----VIGKGHFGVVYHGEYIDQAQNRIQCAIKSL-SRITEMQQVEAFLR 71
Query: 95 EVRIMKMLDHPNIVKLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-R 152
E +M+ L+HPN++ L + + E ++++ Y G++ ++ R + F
Sbjct: 72 EGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL 131
Query: 153 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-----NEFTPGNKLDTFCGS 207
Q+ ++Y ++K +HRDL A N +LD +K+ADFG + E+ +
Sbjct: 132 QVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQ--HRHAR 189
Query: 208 PP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYRI 264
P + A E Q ++ + DVWS GV+L+ L++ G+ P+ +L + +G R+
Sbjct: 190 LPVKWTALESLQTYRFT-TKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQG-RRL 247
Query: 265 P 265
P
Sbjct: 248 P 248
Score = 70.8 bits (174), Expect = 2e-13
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 474 LLKLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQK 531
+L L + + E ++++ Y G++ ++ R + F Q+ ++Y ++
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 532 KIIHRDLKAENLLLDSEMNIKIADFGFS 559
K +HRDL A N +LD +K+ADFG +
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLA 171
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 137 bits (348), Expect = 1e-36
Identities = 42/290 (14%), Positives = 90/290 (31%), Gaps = 47/290 (16%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQ-LNPGSLQKLFREVRIMKMLDH 104
G+Y+LL G + A ++VA+ +D L LQ+ + +D
Sbjct: 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDK 90
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
P + ++ V+ T +V E+ GG + + V A + + +A H+
Sbjct: 91 PGVARVLDVVHTRAGGLVVAEWIRGGSLQE--VADTSPSPVGAIRAMQSLAAAADAAHRA 148
Query: 165 KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGP 224
+ + + + ++ +A P
Sbjct: 149 GVALSIDHPSRVRVSIDGDVVLAYPA-------------------TMPDA--------NP 181
Query: 225 EVDVWSLGVILYTLVSGSLPFDGST--------LRELRERVLRGKYR---IPFYMSTDCE 273
+ D+ +G LY L+ P + R+ + + IPF +S
Sbjct: 182 QDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAA 241
Query: 274 NLLKKFLVLNPAKRASLEVSGEVTLGGAPVTSSGGAGTNHTHNSSISPAP 323
++ + R++ + + A + + +S AP
Sbjct: 242 RSVQG----DGGIRSASTLLNL--MQQATAVADRTEVLGPIDEAPVSAAP 285
Score = 66.7 bits (163), Expect = 3e-12
Identities = 12/87 (13%), Positives = 29/87 (33%), Gaps = 2/87 (2%)
Query: 478 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRD 537
V+ T +V E+ GG + + V A + + +A H+ +
Sbjct: 97 LDVVHTRAGGLVVAEWIRGGSLQE--VADTSPSPVGAIRAMQSLAAAADAAHRAGVALSI 154
Query: 538 LKAENLLLDSEMNIKIADFGFSNEFTP 564
+ + + ++ +A + P
Sbjct: 155 DHPSRVRVSIDGDVVLAYPATMPDANP 181
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 139 bits (351), Expect = 2e-36
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 33/242 (13%)
Query: 49 KLLKTIGKGNFAKV---KLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
L + +GKG F V +L + + +VA+K++ + +++ RE MK DHP
Sbjct: 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHP 85
Query: 106 NIVKLFQV------IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVS-AV 158
++ KL V +++ + G++ +L+ R+ E + +V V
Sbjct: 86 HVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLAS-RIGENPFNLPLQTLVRFMV 144
Query: 159 Q------YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS------NEFTPGNKLDTFCG 206
Y + IHRDL A N +L +M + +ADFG S + + G
Sbjct: 145 DIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCA-----S 199
Query: 207 SPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGKYR 263
P + A E Y DVW+ GV ++ +++ G P+ G E+ ++ G R
Sbjct: 200 KLPVKWLALESLADNLYT-VHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG-NR 257
Query: 264 IP 265
+
Sbjct: 258 LK 259
Score = 69.7 bits (171), Expect = 5e-13
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 482 ETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVS-AVQ------YCHQKKII 534
+++ + G++ +L+ R+ E + +V V Y + I
Sbjct: 101 GRLPIPMVILPFMKHGDLHAFLLAS-RIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFI 159
Query: 535 HRDLKAENLLLDSEMNIKIADFGFS 559
HRDL A N +L +M + +ADFG S
Sbjct: 160 HRDLAARNCMLAEDMTVCVADFGLS 184
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 137 bits (348), Expect = 3e-36
Identities = 60/270 (22%), Positives = 114/270 (42%), Gaps = 34/270 (12%)
Query: 22 NISSSRLMSSRRESSRRERDEPHI--GKYKLLKTIGKGNFAKV---KLAKHVPTGKEVAI 76
+ SS L+ E + + ++ I L K +G+G F V L + T +VA+
Sbjct: 8 HHHSSGLVPRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAV 67
Query: 77 KIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVI-----ETEKTLYLVMEYASGGE 131
K + + +++ E MK HPN+++L V + +++ + G+
Sbjct: 68 KTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGD 127
Query: 132 VFDYLVLHGRMKEKEARAKFRQIVS-AVQ------YCHQKKIIHRDLKAENLLLDSEMNI 184
+ YL+ R++ + ++ V Y + +HRDL A N +L +M +
Sbjct: 128 LHTYLLYS-RLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTV 186
Query: 185 KIADFGFS------NEFTPGNKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILY 236
+ADFG S + + G P + A E + Y + DVW+ GV ++
Sbjct: 187 CVADFGLSKKIYSGDYYRQGRI-----AKMPVKWIAIESLADRVYT-SKSDVWAFGVTMW 240
Query: 237 TLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
+ + G P+ G E+ + +L G +R+
Sbjct: 241 EIATRGMTPYPGVQNHEMYDYLLHG-HRLK 269
Score = 68.5 bits (168), Expect = 1e-12
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 486 TLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVS-AVQ------YCHQKKIIHRDL 538
+++ + G++ YL+ R++ + ++ V Y + +HRDL
Sbjct: 115 KPMVILPFMKYGDLHTYLLYS-RLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDL 173
Query: 539 KAENLLLDSEMNIKIADFGFS 559
A N +L +M + +ADFG S
Sbjct: 174 AARNCMLRDDMTVCVADFGLS 194
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 136 bits (344), Expect = 7e-36
Identities = 66/264 (25%), Positives = 104/264 (39%), Gaps = 45/264 (17%)
Query: 36 SRRERDEPHI--GKYKLLKTIGKGNFAKVKL--AKHVPTGKE---VAIKIIDKTQLNPGS 88
HI L + +G+G F KV L ++ K+ VA+K L +
Sbjct: 3 MHSGIHVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKA-----LKDPT 57
Query: 89 LQ---KLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEK 145
L RE ++ L H +IVK + V L +V EY G++ +L HG
Sbjct: 58 LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMI 117
Query: 146 EARAKFR----------------QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADF 189
+ R QI S + Y + +HRDL N L+ + + +KI DF
Sbjct: 118 LVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDF 177
Query: 190 GFS-----NEFTPGNKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-G 241
G S ++ P + PE +K+ E DVWS GVIL+ + + G
Sbjct: 178 GMSRDVYSTDYYRVGGHTML----PIRWMPPESIMYRKFT-TESDVWSFGVILWEIFTYG 232
Query: 242 SLPFDGSTLRELRERVLRGKYRIP 265
P+ + E+ E + +G +
Sbjct: 233 KQPWFQLSNTEVIECITQG-RVLE 255
Score = 67.6 bits (166), Expect = 2e-12
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR-------------- 519
++K + V L +V EY G++ +L HG + R
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 520 --QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
QI S + Y + +HRDL N L+ + + +KI DFG S
Sbjct: 139 ASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 136 bits (344), Expect = 1e-35
Identities = 54/253 (21%), Positives = 101/253 (39%), Gaps = 38/253 (15%)
Query: 41 DEPHI--GKYKLLKTIGKGNFAKV--KLAKHVPTGKE---VAIKIIDKTQLNPGSLQKLF 93
DE + K + + +G+G+F V +AK V + VAIK + + +
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFL 76
Query: 94 REVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-- 151
E +MK + ++V+L V+ + ++ME + G++ YL
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136
Query: 152 --------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE--------F 195
+I + Y + K +HRDL A N ++ + +KI DFG + +
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 196 TPGNKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRE 252
L P + +PE + + DVWS GV+L+ + + P+ G + +
Sbjct: 197 GGKGLL-------PVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
Query: 253 LRERVLRGKYRIP 265
+ V+ G +
Sbjct: 249 VLRFVMEG-GLLD 260
Score = 71.2 bits (175), Expect = 1e-13
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 10/96 (10%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----------RQIVS 523
+++L V+ + ++ME + G++ YL +I
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 524 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
+ Y + K +HRDL A N ++ + +KI DFG +
Sbjct: 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 185
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 137 bits (347), Expect = 1e-35
Identities = 59/270 (21%), Positives = 116/270 (42%), Gaps = 14/270 (5%)
Query: 7 RYSTGKSETGRGSENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAK 66
+ + + +I S L ++ + P + IG+G+F V
Sbjct: 50 KAGSENLYFQGANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT 109
Query: 67 HVPTGKE---VAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVI-ETEKTLYL 122
+ + A+K + + G + + E IMK HPN++ L + +E + +
Sbjct: 110 LLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168
Query: 123 VMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKIIHRDLKAENLLLDSE 181
V+ Y G++ +++ + F Q+ +++ KK +HRDL A N +LD +
Sbjct: 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK 228
Query: 182 MNIKIADFGFSNEFTPGNKLDTFCGSP---P--YAAPELFQGKKYDGPEVDVWSLGVILY 236
+K+ADFG + + + P + A E Q +K+ + DVWS GV+L+
Sbjct: 229 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLW 287
Query: 237 TLVS-GSLPFDGSTLRELRERVLRGKYRIP 265
L++ G+ P+ ++ +L+G R+
Sbjct: 288 ELMTRGAPPYPDVNTFDITVYLLQG-RRLL 316
Score = 70.6 bits (173), Expect = 4e-13
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 480 VIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-RQIVSAVQYCHQKKIIHRDL 538
+ +E + +V+ Y G++ +++ + F Q+ +++ KK +HRDL
Sbjct: 159 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDL 218
Query: 539 KAENLLLDSEMNIKIADFGFS 559
A N +LD + +K+ADFG +
Sbjct: 219 AARNCMLDEKFTVKVADFGLA 239
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 135 bits (343), Expect = 2e-35
Identities = 74/244 (30%), Positives = 104/244 (42%), Gaps = 37/244 (15%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKE--VAIKIIDKTQLNPGSLQKLFREVRIMKML-DHP 105
K IG+GNF +V A+ G AIK + K + + E+ ++ L HP
Sbjct: 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLGHHP 86
Query: 106 NIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-------------- 151
NI+ L E LYL +EYA G + D+L ++ A A
Sbjct: 87 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 152 --RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEF-----TPGNKLDTF 204
+ + Y QK+ IHRDL A N+L+ KIADFG S +L
Sbjct: 147 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL--- 203
Query: 205 CGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELRERVLRGK 261
P + A E Y DVWS GV+L+ +VS G P+ G T EL E++ +G
Sbjct: 204 ----PVRWMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG- 257
Query: 262 YRIP 265
YR+
Sbjct: 258 YRLE 261
Score = 70.8 bits (174), Expect = 2e-13
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--------------- 518
++ L E LYL +EYA G + D+L ++ A A
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 519 -RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
+ + Y QK+ IHRDL A N+L+ KIADFG S
Sbjct: 148 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 189
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 133 bits (337), Expect = 1e-34
Identities = 56/260 (21%), Positives = 96/260 (36%), Gaps = 38/260 (14%)
Query: 34 ESSRRERDEPHI--GKYKLLKTIGKGNFAKV--KLAKHVPTGKE---VAIKIIDKTQLNP 86
+ D + L++ +G G F +V +P VA+K + +
Sbjct: 16 GKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSE 74
Query: 87 GSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKE 146
E I+ +H NIV+ V +++ME +GG++ +L +
Sbjct: 75 QDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQP 134
Query: 147 ARAKFRQIVS-AVQ------YCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNE-- 194
+ ++ A Y + IHRD+ A N LL KI DFG + +
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 194
Query: 195 ------FTPGNKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF 245
L P + PE F + + D WS GV+L+ + S G +P+
Sbjct: 195 RASYYRKGGCAML-------PVKWMPPEAFMEGIFT-SKTDTWSFGVLLWEIFSLGYMPY 246
Query: 246 DGSTLRELRERVLRGKYRIP 265
+ +E+ E V G R+
Sbjct: 247 PSKSNQEVLEFVTSG-GRMD 265
Score = 63.1 bits (154), Expect = 7e-11
Identities = 21/96 (21%), Positives = 38/96 (39%), Gaps = 10/96 (10%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVS-AVQ------ 526
+++ V +++ME +GG++ +L + + ++ A
Sbjct: 95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 527 YCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFS 559
Y + IHRD+ A N LL KI DFG +
Sbjct: 155 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 131 bits (333), Expect = 2e-34
Identities = 55/251 (21%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 49 KLLKTIGKGNFAKV---KLAKHVPTGKE--VAIKIIDKTQLNPGS----LQKLFREVRIM 99
+ ++ +G+ F KV L P + VAIK L + ++ E +
Sbjct: 12 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKT-----LKDKAEGPLREEFRHEAMLR 66
Query: 100 KMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF-------- 151
L HPN+V L V+ ++ L ++ Y S G++ ++LV+ + +
Sbjct: 67 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 126
Query: 152 --------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS------NEFTP 197
QI + ++Y ++H+DL N+L+ ++N+KI+D G + +
Sbjct: 127 PPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 186
Query: 198 GNKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELR 254
P + APE K+ + D+WS GV+L+ + S G P+ G + +++
Sbjct: 187 LGN-----SLLPIRWMAPEAIMYGKFS-IDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV 240
Query: 255 ERVLRGKYRIP 265
E + +P
Sbjct: 241 EMIRNR-QVLP 250
Score = 67.6 bits (166), Expect = 1e-12
Identities = 21/102 (20%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--------------- 518
++ L V+ ++ L ++ Y S G++ ++LV+ + +
Sbjct: 74 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 519 -RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
QI + ++Y ++H+DL N+L+ ++N+KI+D G
Sbjct: 134 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLF 175
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 134 bits (339), Expect = 2e-34
Identities = 84/329 (25%), Positives = 132/329 (40%), Gaps = 87/329 (26%)
Query: 42 EPHIG-KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
+ H+ KY+L+K +GKG + V + TG+ VA+K I N Q+ FRE+ I+
Sbjct: 4 DRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILT 63
Query: 101 -MLDHPNIVKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKE---KEARAKF--R 152
+ H NIV L V+ + + +YLV +Y D LH ++ + ++
Sbjct: 64 ELSGHENIVNLLNVLRADNDRDVYLVFDYMET----D---LHAVIRANILEPVHKQYVVY 116
Query: 153 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP--- 209
Q++ ++Y H ++HRD+K N+LL++E ++K+ADFG S F ++
Sbjct: 117 QLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 210 -------------------YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-S 248
Y APE L KY +D+WSLG IL ++ G F G S
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGSTKYT-KGIDMWSLGCILGEILCGKPIFPGSS 235
Query: 249 TLRELRE-------------------------RVLRGKYRIPFY---------------- 267
T+ +L L+ K I
Sbjct: 236 TMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKI 295
Query: 268 -----MSTDCENLLKKFLVLNPAKRASLE 291
+ + +LL K L NP KR S
Sbjct: 296 NPKADCNEEALDLLDKLLQFNPNKRISAN 324
Score = 58.5 bits (142), Expect = 3e-09
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 472 ETLLKLFQVIETE--KTLYLVMEYASGGEVFDYLVLHGRMKE---KEARAKF--RQIVSA 524
E ++ L V+ + + +YLV +Y D LH ++ + ++ Q++
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMET----D---LHAVIRANILEPVHKQYVVYQLIKV 121
Query: 525 VQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQ 584
++Y H ++HRD+K N+LL++E ++K+ADFG S F ++ E F
Sbjct: 122 IKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 585 GGAP 588
P
Sbjct: 182 DDQP 185
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 132 bits (334), Expect = 3e-34
Identities = 62/251 (24%), Positives = 101/251 (40%), Gaps = 48/251 (19%)
Query: 49 KLLKTIGKGNFAKVKL--AKHVPTGKE---VAIKIIDKTQLNPGS---LQKLFREVRIMK 100
L +G+G F KV L ++ ++ VA+K L S Q RE ++
Sbjct: 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVK-----ALKEASESARQDFQREAELLT 98
Query: 101 MLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--------- 151
ML H +IV+ F V + L +V EY G++ +L HG + A +
Sbjct: 99 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 158
Query: 152 ------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE--------FTP 197
Q+ + + Y +HRDL N L+ + +KI DFG S +
Sbjct: 159 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 218
Query: 198 GNKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELR 254
L P + PE +K+ E DVWS GV+L+ + + G P+ + E
Sbjct: 219 RTML-------PIRWMPPESILYRKFT-TESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 270
Query: 255 ERVLRGKYRIP 265
+ + +G +
Sbjct: 271 DCITQG-RELE 280
Score = 66.9 bits (164), Expect = 4e-12
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 15/101 (14%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--------------- 518
+++ F V + L +V EY G++ +L HG + A +
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 519 RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
Q+ + + Y +HRDL N L+ + +KI DFG S
Sbjct: 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 205
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 132 bits (334), Expect = 7e-34
Identities = 55/260 (21%), Positives = 96/260 (36%), Gaps = 38/260 (14%)
Query: 34 ESSRRERDEPHI--GKYKLLKTIGKGNFAKV--KLAKHVPTGKE---VAIKIIDKTQLNP 86
+ D + L++ +G G F +V +P VA+K + +
Sbjct: 57 GKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSE 115
Query: 87 GSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKE 146
E I+ +H NIV+ V ++++E +GG++ +L +
Sbjct: 116 QDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP 175
Query: 147 ARAKFRQIVS-AVQ------YCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFSNE-- 194
+ ++ A Y + IHRD+ A N LL KI DFG + +
Sbjct: 176 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 235
Query: 195 ------FTPGNKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF 245
L P + PE F + + D WS GV+L+ + S G +P+
Sbjct: 236 RAGYYRKGGCAML-------PVKWMPPEAFMEGIFT-SKTDTWSFGVLLWEIFSLGYMPY 287
Query: 246 DGSTLRELRERVLRGKYRIP 265
+ +E+ E V G R+
Sbjct: 288 PSKSNQEVLEFVTSG-GRMD 306
Score = 62.0 bits (151), Expect = 2e-10
Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 10/96 (10%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVS-AVQ------ 526
+++ V ++++E +GG++ +L + + ++ A
Sbjct: 136 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195
Query: 527 YCHQKKIIHRDLKAENLLLDSE---MNIKIADFGFS 559
Y + IHRD+ A N LL KI DFG +
Sbjct: 196 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 128 bits (324), Expect = 5e-33
Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 48/256 (18%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKE-----VAIKIIDKTQLNPGSLQKLFREVRIMKMLD 103
L KT+G+G F KV A VA+K++ K +P L+ L E ++K ++
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLSEFNVLKQVN 84
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF------------ 151
HP+++KL+ + L L++EYA G + +L ++ +
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 152 ------------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS------N 193
QI +QY + K++HRDL A N+L+ +KI+DFG S +
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 194 EFTPGNKLDTFCGSPP--YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGST 249
+ ++ G P + A E LF Y + DVWS GV+L+ +V+ G P+ G
Sbjct: 205 SYVKRSQ-----GRIPVKWMAIESLFDH-IYT-TQSDVWSFGVLLWEIVTLGGNPYPGIP 257
Query: 250 LRELRERVLRGKYRIP 265
L + G +R+
Sbjct: 258 PERLFNLLKTG-HRME 272
Score = 64.6 bits (158), Expect = 2e-11
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 24/110 (21%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--------------- 518
++KL+ + L L++EYA G + +L ++ +
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 519 ---------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
QI +QY + K++HRDL A N+L+ +KI+DFG S
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS 197
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 127 bits (321), Expect = 1e-32
Identities = 64/251 (25%), Positives = 99/251 (39%), Gaps = 42/251 (16%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKE-----VAIKIIDKTQLNPGSLQKLFREVRIMKML- 102
KT+G G F KV A K VA+K++ K + + L E++++ L
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KPSAHLTEREALMSELKVLSYLG 84
Query: 103 DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYL-----------VLHGRMKEKEARAKF 151
+H NIV L ++ EY G++ ++L M++ E
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 152 RQIVS-AVQ------YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS------NEFTPG 198
++S + Q + K IHRDL A N+LL KI DFG + + +
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 199 NKLDTFCGSPPY--AAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG-STLRELR 254
P APE Y E DVWS G+ L+ L S GS P+ G +
Sbjct: 205 GN-----ARLPVKWMAPESIFNCVYT-FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258
Query: 255 ERVLRGKYRIP 265
+ + G +R+
Sbjct: 259 KMIKEG-FRML 268
Score = 67.7 bits (166), Expect = 2e-12
Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 18/104 (17%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYL-----------VLHGRMKEKEARAKFRQIV 522
++ L ++ EY G++ ++L M++ E ++
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 523 S-AVQ------YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
S + Q + K IHRDL A N+LL KI DFG +
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA 192
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 127 bits (321), Expect = 2e-32
Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 52/258 (20%)
Query: 49 KLLKTIGKGNFAKVKL--AKHVPTGKE---VAIKIIDKTQLNPGSLQKLFREVRIMKMLD 103
+ ++ IG+G F +V A + + VA+K++ K + + RE +M D
Sbjct: 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKML-KEEASADMQADFQREAALMAEFD 108
Query: 104 HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF------------ 151
+PNIVKL V K + L+ EY + G++ ++L
Sbjct: 109 NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 152 ------------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE----- 194
RQ+ + + Y ++K +HRDL N L+ M +KIADFG S
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 228
Query: 195 ---FTPGNKLDTFCGSPP--YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG 247
+ + P + PE +F +Y E DVW+ GV+L+ + S G P+ G
Sbjct: 229 YYKADGNDAI-------PIRWMPPESIFYN-RYT-TESDVWAYGVVLWEIFSYGLQPYYG 279
Query: 248 STLRELRERVLRGKYRIP 265
E+ V G +
Sbjct: 280 MAHEEVIYYVRDG-NILA 296
Score = 63.9 bits (156), Expect = 5e-11
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 24/110 (21%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--------------- 518
++KL V K + L+ EY + G++ ++L
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 519 ---------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
RQ+ + + Y ++K +HRDL N L+ M +KIADFG S
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS 221
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 125 bits (316), Expect = 8e-32
Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 38/247 (15%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKE-----VAIKIIDKTQLNPGSLQKLFREVRIMKMLD 103
+ KT+G G F KV A GKE VA+K++ K+ + + L E++IM L
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLG 107
Query: 104 -HPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF----------- 151
H NIV L + ++ EY G++ ++L R+ E +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 152 ---RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS------NEFTPGNKLD 202
Q+ + + K IHRD+ A N+LL + KI DFG + + +
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN-- 225
Query: 203 TFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGS-TLRELRERVL 258
P + APE Y + DVWS G++L+ + S G P+ G + + V
Sbjct: 226 ---ARLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281
Query: 259 RGKYRIP 265
G Y++
Sbjct: 282 DG-YQMA 287
Score = 68.4 bits (168), Expect = 1e-12
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 14/87 (16%)
Query: 487 LYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--------------RQIVSAVQYCHQKK 532
+ ++ EY G++ ++L R+ E + Q+ + + K
Sbjct: 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN 184
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
IHRD+ A N+LL + KI DFG +
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLA 211
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 125 bits (315), Expect = 1e-31
Identities = 71/251 (28%), Positives = 115/251 (45%), Gaps = 43/251 (17%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIMKM 101
L K +G+G F +V +A+ V K+ VA+K++ K L L E+ +MKM
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKM 96
Query: 102 L-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR-------- 152
+ H NI+ L + LY+++EYAS G + +YL + + R
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 153 --------QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS------NEFTPG 198
Q+ ++Y +K IHRDL A N+L+ +KIADFG + + +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 199 NKLDTFCGSPP--YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRELR 254
G P + APE LF Y + DVWS GV+++ + + G P+ G + EL
Sbjct: 217 TN-----GRLPVKWMAPEALFDR-VYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 255 ERVLRGKYRIP 265
+ + G +R+
Sbjct: 270 KLLKEG-HRMD 279
Score = 66.5 bits (163), Expect = 6e-12
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR-------------- 519
++ L + LY+++EYAS G + +YL + + R
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 520 --QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
Q+ ++Y +K IHRDL A N+L+ +KIADFG +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 125 bits (317), Expect = 2e-31
Identities = 73/253 (28%), Positives = 117/253 (46%), Gaps = 47/253 (18%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKE-------VAIKIIDKTQLNPGSLQKLFREVRIMKM 101
L K +G+G F +V LA+ + K+ VA+K++ K+ L L E+ +MKM
Sbjct: 72 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKM 130
Query: 102 L-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--------- 151
+ H NI+ L + LY+++EYAS G + +YL + +
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 152 -------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN--------EFT 196
Q+ ++Y KK IHRDL A N+L+ + +KIADFG + + T
Sbjct: 191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 197 PGNKLDTFCGSPP--YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRE 252
+L P + APE LF Y + DVWS GV+L+ + + G P+ G + E
Sbjct: 251 TNGRL-------PVKWMAPEALFDR-IYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 301
Query: 253 LRERVLRGKYRIP 265
L + + G +R+
Sbjct: 302 LFKLLKEG-HRMD 313
Score = 68.2 bits (167), Expect = 2e-12
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--------------- 518
++ L + LY+++EYAS G + +YL + +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 519 -RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
Q+ ++Y KK IHRDL A N+L+ + +KIADFG +
Sbjct: 197 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 123 bits (310), Expect = 4e-31
Identities = 63/252 (25%), Positives = 102/252 (40%), Gaps = 45/252 (17%)
Query: 49 KLLKTIGKGNFAKVKLAK-----HVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD 103
KL K +G+G F +V A T + VA+K++ K + L E++I+ +
Sbjct: 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSELKILIHIG 88
Query: 104 -HPNIVKLFQV-IETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR--------- 152
H N+V L + L +++E+ G + YL A
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 153 -------QIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN--------EFTP 197
Q+ +++ +K IHRDL A N+LL + +KI DFG +
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 198 GNKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG-STLREL 253
+L P + APE + Y + DVWS GV+L+ + S G+ P+ G E
Sbjct: 209 DARL-------PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
Query: 254 RERVLRGKYRIP 265
R+ G R+
Sbjct: 261 CRRLKEG-TRMR 271
Score = 66.1 bits (162), Expect = 8e-12
Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 16/96 (16%)
Query: 480 VIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFR----------------QIVS 523
+ L +++E+ G + YL A Q+
Sbjct: 100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK 159
Query: 524 AVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
+++ +K IHRDL A N+LL + +KI DFG +
Sbjct: 160 GMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 124 bits (312), Expect = 6e-31
Identities = 70/253 (27%), Positives = 111/253 (43%), Gaps = 47/253 (18%)
Query: 49 KLLKTIGKGNFAKVK--LAKHVPTGKE-----VAIKIIDKTQLNPGSLQKLFREVRIMKM 101
L K +G+G F +V A + K VA+K++ K L L E+ +MKM
Sbjct: 84 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKM 142
Query: 102 L-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--------- 151
+ H NI+ L + LY+++EYAS G + +YL R E
Sbjct: 143 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR-RPPGMEYSYDINRVPEEQMT 201
Query: 152 --------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSN--------EF 195
Q+ ++Y +K IHRDL A N+L+ +KIADFG + +
Sbjct: 202 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 196 TPGNKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGSTLRE 252
T +L P + APE + Y + DVWS GV+++ + + G P+ G + E
Sbjct: 262 TTNGRL-------PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 313
Query: 253 LRERVLRGKYRIP 265
L + + G +R+
Sbjct: 314 LFKLLKEG-HRMD 325
Score = 66.6 bits (163), Expect = 8e-12
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 18/103 (17%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--------------- 518
++ L + LY+++EYAS G + +YL R E
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR-RPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 519 --RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
Q+ ++Y +K IHRDL A N+L+ +KIADFG +
Sbjct: 208 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 250
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 123 bits (311), Expect = 8e-31
Identities = 62/318 (19%), Positives = 116/318 (36%), Gaps = 79/318 (24%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML--- 102
+Y L++ +G G+F+ V LAK + VA+KI+ + + E+++++ +
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDA 75
Query: 103 -----DHP---NIVKL---FQVIETEKT-LYLVMEYASGGEVFDYLVL--HGRMKEKEAR 148
D +I+KL F + +V E G + + H + +
Sbjct: 76 DNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFE-VLGENLLALIKKYEHRGIPLIYVK 134
Query: 149 AKFRQIVSAVQYCHQK-KIIHRDLKAENLLLDSE------MNIKIADFGFSNEFTPGNKL 201
+Q++ + Y H++ IIH D+K EN+L++ + IKIAD G + +
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG-NACWY-DEHY 192
Query: 202 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLREL-------- 253
+ Y +PE+ G + D+WS +++ L++G F+
Sbjct: 193 TNSIQTREYRSPEVLLGAPWGCG-ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251
Query: 254 ----------------------------------------RERVLRGKYRIPFYMSTDCE 273
E VL KY+ + +
Sbjct: 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 311
Query: 274 NLLKKFLVLNPAKRASLE 291
+ L L L+P KRA
Sbjct: 312 DFLSPMLQLDPRKRADAG 329
Score = 51.2 bits (123), Expect = 5e-07
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 515 RAKFRQIVSAVQYCHQK-KIIHRDLKAENLLLDSE------MNIKIADFGFSNEFTPGNK 567
+ +Q++ + Y H++ IIH D+K EN+L++ + IKIAD G + +
Sbjct: 134 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG-NACWY-DEH 191
Query: 568 LDTFCGSPPYAAPELFQG 585
+ Y +PE+ G
Sbjct: 192 YTNSIQTREYRSPEVLLG 209
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 122 bits (307), Expect = 2e-30
Identities = 61/261 (23%), Positives = 99/261 (37%), Gaps = 57/261 (21%)
Query: 49 KLLKTIGKGNFAKVKLAKHVPTGKE-----VAIKIIDKTQLNPGS----LQKLFREVRIM 99
+ K +G G F KV A K VA+K L + + L E+++M
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVK-----MLKEKADSSEREALMSELKMM 102
Query: 100 KML-DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF------- 151
L H NIV L +YL+ EY G++ +YL R K E ++
Sbjct: 103 TQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK-REKFSEDEIEYENQKRLE 161
Query: 152 -----------------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-- 192
Q+ +++ K +HRDL A N+L+ +KI DFG +
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 193 ----NEFTPGNKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF 245
+ + P + APE Y + DVWS G++L+ + S G P+
Sbjct: 222 IMSDSNYVVRGN-----ARLPVKWMAPESLFEGIYT-IKSDVWSYGILLWEIFSLGVNPY 275
Query: 246 DG-STLRELRERVLRGKYRIP 265
G + + G +++
Sbjct: 276 PGIPVDANFYKLIQNG-FKMD 295
Score = 63.9 bits (156), Expect = 4e-11
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 25/110 (22%)
Query: 474 LLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF--------------- 518
++ L +YL+ EY G++ +YL R K E ++
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK-REKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 519 ---------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
Q+ +++ K +HRDL A N+L+ +KI DFG +
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLA 219
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 115 bits (291), Expect = 7e-28
Identities = 58/239 (24%), Positives = 108/239 (45%), Gaps = 24/239 (10%)
Query: 44 HI-GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML 102
H+ +Y++LK IGKG+F +V A + VA+K++ ++ E+RI++ L
Sbjct: 94 HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN---EKRFHRQAAEEIRILEHL 150
Query: 103 ------DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHG--RMKEKEARAKFRQI 154
+ N++ + + + + E S +++ + + R I
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLDSEM--NIKIADFG---FSNEFTPGNKLDTFCGSPP 209
+ + H+ +IIH DLK EN+LL + IK+ DFG + ++ ++ T+ S
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ-----RVYTYIQSRF 264
Query: 210 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYM 268
Y APE+ G +Y P +D+WSLG IL L++G G + ++ +
Sbjct: 265 YRAPEVILGARYGMP-IDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322
Score = 53.2 bits (128), Expect = 2e-07
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 519 RQIVSAVQYCHQKKIIHRDLKAENLLLDSEM--NIKIADFG---FSNE 561
I+ + H+ +IIH DLK EN+LL + IK+ DFG + ++
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 113 bits (284), Expect = 3e-27
Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 29/240 (12%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFR-----EVRIMK 100
+Y++ IGKG+F +V A + VAIKII +K F EVR+++
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN--------KKAFLNQAQIEVRLLE 105
Query: 101 ML------DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFR 152
++ IV L + L LV E S ++D L + R +
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 153 QIVSAVQYCHQKK--IIHRDLKAENLLLDSEMN--IKIADFGFSNEFTPGNKLDTFCGSP 208
Q+ +A+ + + IIH DLK EN+LL + IKI DFG S+ G ++ + S
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQL-GQRIYQYIQSR 222
Query: 209 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYM 268
Y +PE+ G YD +D+WSLG IL + +G F G+ + +++ P ++
Sbjct: 223 FYRSPEVLLGMPYDLA-IDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHI 281
Score = 51.6 bits (124), Expect = 5e-07
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 519 RQIVSAVQYCHQKK--IIHRDLKAENLLLDSEMN--IKIADFGFSNEFTPGNKLDTFCGS 574
+Q+ +A+ + + IIH DLK EN+LL + IKI DFG S+ G ++ + S
Sbjct: 164 QQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQL-GQRIYQYIQS 221
Query: 575 PPYAAPE 581
Y +PE
Sbjct: 222 RFYRSPE 228
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 107 bits (268), Expect = 3e-25
Identities = 58/273 (21%), Positives = 104/273 (38%), Gaps = 53/273 (19%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKM 101
+ +++ +G G F +V L +H+ K A+K++ +++K R E I+K
Sbjct: 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVR-------NIKKYTRSAKIEADILKK 87
Query: 102 L-----DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFRQI 154
+ ++ NIVK + L+ E G +++ + + ++ + +I
Sbjct: 88 IQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEI 146
Query: 155 VSAVQYCHQKKIIHRDLKAENLLLDSEM-------------------------NIKIADF 189
+ A+ Y + + H DLK EN+LLD IK+ DF
Sbjct: 147 LKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDF 206
Query: 190 G---FSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 246
G F ++ + + Y APE+ +D D+WS G +L L +GSL F
Sbjct: 207 GCATFKSD-----YHGSIINTRQYRAPEVILNLGWDVS-SDMWSFGCVLAELYTGSLLFR 260
Query: 247 GSTLRELRERVLRGKYRIPFYMSTDCENLLKKF 279
E + IP M +
Sbjct: 261 THEHMEHLAMMESIIQPIPKNMLYEATKTNGSK 293
Score = 47.3 bits (113), Expect = 9e-06
Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 28/71 (39%)
Query: 519 RQIVSAVQYCHQKKIIHRDLKAENLLLDSEM-------------------------NIKI 553
+I+ A+ Y + + H DLK EN+LLD IK+
Sbjct: 144 IEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKL 203
Query: 554 ADFG---FSNE 561
DFG F ++
Sbjct: 204 IDFGCATFKSD 214
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 104 bits (261), Expect = 1e-24
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 32/213 (15%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ--KLFR-EVRIMKMLDHPNIVKL 110
+G+G F V K VA+K + ++ + + + F E+++M H N+V+L
Sbjct: 39 MGEGGFGVV--YKGYVNNTTVAVKKL-AAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEK----EARAKFRQIV--SA--VQYCH 162
L LV Y G + D L R K I +A + + H
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCK---IAQGAANGINFLH 150
Query: 163 QKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-------LDTFCGSPPYAAPEL 215
+ IHRD+K+ N+LLD KI+DFG + + + T Y APE
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTT-A---YMAPEA 206
Query: 216 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGS 248
+G+ + D++S GV+L +++G D
Sbjct: 207 LRGEITP--KSDIYSFGVVLLEIITGLPAVDEH 237
Score = 63.3 bits (155), Expect = 5e-11
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
Query: 527 YCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK-------LDTFCGSPPYAA 579
+ H+ IHRD+K+ N+LLD KI+DFG + + + T Y A
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTT-A---YMA 203
Query: 580 PE 581
PE
Sbjct: 204 PE 205
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 103 bits (260), Expect = 1e-24
Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 38/255 (14%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH- 104
+Y+L + IG G+F + L + G+EVAIK+ +P L E +I KM+
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ----LHIESKIYKMMQGG 64
Query: 105 PNIVKLFQVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
I + +VME S ++F++ + K Q++S ++Y H
Sbjct: 65 VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIH 122
Query: 163 QKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFTPGNKLD--------TFCGSPPYA 211
K IHRD+K +N L+ + I DFG + ++ G+ YA
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 182
Query: 212 AP----ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---STLRELRERVLRGKYRI 264
+ + Q ++ D D+ SLG +L GSLP+ G +T R+ ER+ K
Sbjct: 183 SINTHLGIEQSRR-D----DLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK--- 234
Query: 265 PFYMSTDCENLLKKF 279
MST E L K +
Sbjct: 235 ---MSTPIEVLCKGY 246
Score = 47.7 bits (114), Expect = 5e-06
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFT 563
Q++S ++Y H K IHRD+K +N L+ + I DFG + ++
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 105 bits (263), Expect = 1e-24
Identities = 65/325 (20%), Positives = 117/325 (36%), Gaps = 93/325 (28%)
Query: 46 GKYKLLKTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMK 100
+Y+++ +G+G F KV H +VA+KII ++ K E+ ++K
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR-------NVGKYREAARLEINVLK 71
Query: 101 ML------DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFR 152
+ + V + + + E G F++L + R
Sbjct: 72 KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAY 130
Query: 153 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMN-------------------IKIADFG--- 190
Q+ A+++ H+ ++ H DLK EN+L + I++ADFG
Sbjct: 131 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 190
Query: 191 FSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTL 250
F +E T + Y PE+ + P DVWS+G IL+ G F
Sbjct: 191 FDHE-----HHTTIVATRHYRPPEVILELGWAQP-CDVWSIGCILFEYYRGFTLFQTHEN 244
Query: 251 RE-LR--ERVL------------RGKY----RIPFYMST--------------------- 270
RE L E++L + KY + + ++
Sbjct: 245 REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDS 304
Query: 271 ----DCENLLKKFLVLNPAKRASLE 291
+L+++ L +PA+R +L
Sbjct: 305 LEHVQLFDLMRRMLEFDPAQRITLA 329
Score = 47.3 bits (113), Expect = 9e-06
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 22/65 (33%)
Query: 519 RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN-------------------IKIADFG-- 557
Q+ A+++ H+ ++ H DLK EN+L + I++ADFG
Sbjct: 130 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 189
Query: 558 -FSNE 561
F +E
Sbjct: 190 TFDHE 194
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 104 bits (261), Expect = 2e-24
Identities = 75/325 (23%), Positives = 122/325 (37%), Gaps = 93/325 (28%)
Query: 46 GKYKLLKTIGKGNFAKVKLAK-HVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMK 100
+Y+++ T+G+G F KV H G+ VA+KI+ ++ + E+++++
Sbjct: 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK-------NVDRYCEAARSEIQVLE 66
Query: 101 ML------DHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGR--MKEKEARAKFR 152
L V++ + E + +V E G +D++ +G + R
Sbjct: 67 HLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAY 125
Query: 153 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMN-------------------IKIADFG--- 190
QI +V + H K+ H DLK EN+L IK+ DFG
Sbjct: 126 QICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185
Query: 191 FSNEFTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTL 250
+ +E T + Y APE+ + P DVWS+G IL G F
Sbjct: 186 YDDE-----HHSTLVSTRHYRAPEVILALGWSQP-CDVWSIGCILIEYYLGFTVFPTHDS 239
Query: 251 RE-LR--ERVL-----------------------------RGKYRIP-------FYMSTD 271
+E L ER+L G+Y F +S D
Sbjct: 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQD 299
Query: 272 CEN-----LLKKFLVLNPAKRASLE 291
E+ L++K L +PAKR +L
Sbjct: 300 VEHERLFDLIQKMLEYDPAKRITLR 324
Score = 48.0 bits (115), Expect = 6e-06
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 22/65 (33%)
Query: 519 RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN-------------------IKIADFG-- 557
QI +V + H K+ H DLK EN+L IK+ DFG
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
Query: 558 -FSNE 561
+ +E
Sbjct: 185 TYDDE 189
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 103 bits (260), Expect = 2e-24
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 54 IGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQ--KLFR-EVRIMKMLDHPNIVKL 110
IG G F KV + G +VA+K + P S Q + F E+ + HP++V L
Sbjct: 47 IGHGVFGKVYKG-VLRDGAKVALK-----RRTPESSQGIEEFETEIETLSFCRHPHLVSL 100
Query: 111 FQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEK-----EARAKFRQIV--SA--VQYC 161
+ + L+ +Y G + +L +G E R + I +A + Y
Sbjct: 101 IGFCDERNEMILIYKYMENGNLKRHL--YGSDLPTMSMSWEQRLE---ICIGAARGLHYL 155
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNK--LDTFC-GSPPYAAPELFQ- 217
H + IIHRD+K+ N+LLD KI DFG S + T ++ L T G+ Y PE F
Sbjct: 156 HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIK 215
Query: 218 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRE 252
G+ + + DV+S GV+L+ ++ S RE
Sbjct: 216 GRLTE--KSDVYSFGVVLFEVLCARSAIVQSLPRE 248
Score = 64.5 bits (158), Expect = 2e-11
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 17/110 (15%)
Query: 489 LVMEYASGGEVFDYLVLHGRMKEK-----EARAKFRQIV--SA--VQYCHQKKIIHRDLK 539
L+ +Y G + +L +G E R + I +A + Y H + IIHRD+K
Sbjct: 112 LIYKYMENGNLKRHL--YGSDLPTMSMSWEQRLE---ICIGAARGLHYLHTRAIIHRDVK 166
Query: 540 AENLLLDSEMNIKIADFGFSNEFTPGNK--LDTFC-GSPPYAAPELFQGG 586
+ N+LLD KI DFG S + T ++ L T G+ Y PE F G
Sbjct: 167 SINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKG 216
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 102 bits (255), Expect = 9e-24
Identities = 67/264 (25%), Positives = 110/264 (41%), Gaps = 54/264 (20%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH- 104
+++ K IG GNF +++L K++ T + VAIK+ P L E R K L
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQ----LHLEYRFYKQLGSG 64
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF---------RQIV 155
I +++ K +V+E G + D L R F Q++
Sbjct: 65 DGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDR--------TFSLKTVLMIAIQLI 115
Query: 156 SAVQYCHQKKIIHRDLKAENLLLDSEMN-----IKIADFGFSNEFT--------PGNKLD 202
S ++Y H K +I+RD+K EN L+ N I I DF + E+ P +
Sbjct: 116 SRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHK 175
Query: 203 TFCGSPPYAAP----ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---STLRELRE 255
+ G+ Y + Q ++ D D+ +LG + + GSLP+ G TL+E +
Sbjct: 176 SLTGTARYMSINTHLGKEQSRR-D----DLEALGHMFMYFLRGSLPWQGLKADTLKERYQ 230
Query: 256 RVLRGKYRIPFYMSTDCENLLKKF 279
++ K +T E L + F
Sbjct: 231 KIGDTK------RATPIEVLCENF 248
Score = 47.8 bits (114), Expect = 7e-06
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMN-----IKIADFGFSNEF 562
Q++S ++Y H K +I+RD+K EN L+ N I I DF + E+
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 100 bits (251), Expect = 2e-23
Identities = 57/257 (22%), Positives = 104/257 (40%), Gaps = 40/257 (15%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDH- 104
YK+ + IG+G+F + ++ ++VAIK + P L E R K+L
Sbjct: 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQ----LRDEYRTYKLLAGC 65
Query: 105 PNIVKLFQVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 162
I ++ + LV++ S ++ D + K +Q+++ VQ H
Sbjct: 66 TGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDL--CGRKFSVKTVAMAAKQMLARVQSIH 123
Query: 163 QKKIIHRDLKAENLLLDSEMN-----IKIADFGFSNEFT--------PGNKLDTFCGSPP 209
+K +++RD+K +N L+ + I + DFG + P + G+
Sbjct: 124 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTAR 183
Query: 210 YAAPE----LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---STLRELRERVLRGKY 262
Y + Q ++ D D+ +LG + + GSLP+ G +T ++ ER+ K
Sbjct: 184 YMSINTHLGREQSRR-D----DLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK- 237
Query: 263 RIPFYMSTDCENLLKKF 279
ST L F
Sbjct: 238 -----QSTPLRELCAGF 249
Score = 46.2 bits (110), Expect = 2e-05
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMN-----IKIADFGFSNEF 562
Q+++ VQ H+K +++RD+K +N L+ + I + DFG +
Sbjct: 114 QMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 98.4 bits (246), Expect = 1e-22
Identities = 65/227 (28%), Positives = 96/227 (42%), Gaps = 38/227 (16%)
Query: 54 IGKGNFAKV---KLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFR----EVRIMKMLDHPN 106
+G+G F KV +L G VA+K +L Q EV ++ M H N
Sbjct: 38 LGRGGFGKVYKGRL----ADGTLVAVK-----RLKEERTQGGELQFQTEVEMISMAVHRN 88
Query: 107 IVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEA---RAKFRQIVSA---VQY 160
+++L T LV Y + G V L R + + + R + + + Y
Sbjct: 89 LLRLRGFCMTPTERLLVYPYMANGSVASCL--RERPESQPPLDWPKRQRIALGSARGLAY 146
Query: 161 CHQK---KIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDT--FCGSPPYAAPE- 214
H KIIHRD+KA N+LLD E + DFG + + T G+ + APE
Sbjct: 147 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 206
Query: 215 LFQGK---KYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVL 258
L GK K DV+ GV+L L++G FD + L + +L
Sbjct: 207 LSTGKSSEK-----TDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
Score = 58.8 bits (143), Expect = 2e-09
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 489 LVMEYASGGEVFDYLVLHGRMKEKEA---RAKFRQIVSA---VQYCHQK---KIIHRDLK 539
LV Y + G V L R + + + R + + + Y H KIIHRD+K
Sbjct: 104 LVYPYMANGSVASCL--RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVK 161
Query: 540 AENLLLDSEMNIKIADFGFSNEFTPGNKLDT--FCGSPPYAAPE 581
A N+LLD E + DFG + + T G+ + APE
Sbjct: 162 AANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 205
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 98.3 bits (245), Expect = 2e-22
Identities = 48/267 (17%), Positives = 99/267 (37%), Gaps = 45/267 (16%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHP 105
++ L K IG G F + LA ++ A ++ ++ LF E++ + +
Sbjct: 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVV---KVEYQENGPLFSELKFYQRVAKK 93
Query: 106 NIVKLFQVIETEKTL-------------------YLVMEYASGGEVFDYLVLHGRMKEKE 146
+ +K + + L ++VME G ++ +G K+
Sbjct: 94 DCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKST 152
Query: 147 ARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD--SEMNIKIADFGFSNEFTPGNKL--- 201
+++ ++Y H+ + +H D+KA NLLL + + +AD+G S + P
Sbjct: 153 VLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQY 212
Query: 202 -----DTFCGSPPYAAPELFQGKKY---DGPEVDVWSLGVILYTLVSGSLPFDGSTLREL 253
G+ + + + +G DV LG + + G LP++ +
Sbjct: 213 QENPRKGHNGTIEFTSLDAHKGVALSRRS----DVEILGYCMLRWLCGKLPWEQ--NLKD 266
Query: 254 RERVLRGKYRIPFYMSTDCENLLKKFL 280
V K + +++LK
Sbjct: 267 PVAVQTAKTN---LLDELPQSVLKWAP 290
Score = 55.1 bits (133), Expect = 3e-08
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 488 YLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLD- 546
++VME G ++ +G K+ +++ ++Y H+ + +H D+KA NLLL
Sbjct: 128 FMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGY 186
Query: 547 -SEMNIKIADFGFSNEFTPGNK 567
+ + +AD+G S + P
Sbjct: 187 KNPDQVYLADYGLSYRYCPNGN 208
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 98.5 bits (245), Expect = 7e-22
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 39/260 (15%)
Query: 42 EPHIG-KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
EP +G K++L + IG G+F ++ L ++ T +EVAIK+ + +P L E +I +
Sbjct: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ----LLYESKIYR 57
Query: 101 ML-DHPNIVKLFQVIETEKTLYLVMEY--ASGGEVFDYLVLHGRMKEKEARAKFRQIVSA 157
+L I + LVM+ S ++F++ ++ K Q+++
Sbjct: 58 ILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF--CSRKLSLKTVLMLADQMINR 115
Query: 158 VQYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFT--------PGNKLDTFCG 206
V++ H K +HRD+K +N L+ + I DFG + ++ P + G
Sbjct: 116 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTG 175
Query: 207 SPPYAAP----ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---STLRELRERVLR 259
+ YA+ + Q ++ D D+ SLG +L + GSLP+ G T ++ E++
Sbjct: 176 TARYASVNTHLGIEQSRR-D----DLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 230
Query: 260 GKYRIPFYMSTDCENLLKKF 279
K ++T E L + +
Sbjct: 231 KK------VATSIEALCRGY 244
Score = 45.8 bits (108), Expect = 4e-05
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMN---IKIADFGFSNEFT 563
Q+++ V++ H K +HRD+K +N L+ + I DFG + ++
Sbjct: 111 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 95.7 bits (238), Expect = 3e-21
Identities = 54/267 (20%), Positives = 105/267 (39%), Gaps = 73/267 (27%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKML--- 102
G+Y +++ +G G+F+ V L+ + K VA+K++ + + E+R++K +
Sbjct: 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVV---KSAEHYTETALDEIRLLKSVRNS 93
Query: 103 --DHPN---IVKL---FQVIETEKT-LYLVMEYASGGEVFDYLVL--HGRMKEKEARAKF 151
+ PN +V+L F++ T + +V E G + +++ + + +
Sbjct: 94 DPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKII 152
Query: 152 RQIVSAVQYCHQK-KIIHRDLKAENLLLDSE----------------------------- 181
+Q++ + Y H K +IIH D+K EN+LL
Sbjct: 153 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 212
Query: 182 --------------------MNIKIADFGFSNEFTPGNKLDTFCGSPP-YAAPELFQGKK 220
+ +KIAD G + +K T Y + E+ G
Sbjct: 213 APATAGNFLVNPLEPKNAEKLKVKIADLGNA---CWVHKHFTEDIQTRQYRSLEVLIGSG 269
Query: 221 YDGPEVDVWSLGVILYTLVSGSLPFDG 247
Y+ P D+WS + + L +G F+
Sbjct: 270 YNTP-ADIWSTACMAFELATGDYLFEP 295
Score = 43.4 bits (102), Expect = 2e-04
Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 20/137 (14%)
Query: 489 LVMEYASGGEVFDYLVL--HGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAENLLL 545
+V E G + +++ + + + +Q++ + Y H K +IIH D+K EN+LL
Sbjct: 122 MVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180
Query: 546 DSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP--------------ELFQGGAPVTS 591
I + GS AP + +
Sbjct: 181 SVN-EQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIAD 239
Query: 592 SGGAG-TNHTHNSSISP 607
G A + I
Sbjct: 240 LGNACWVHKHFTEDIQT 256
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 89.4 bits (222), Expect = 2e-19
Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 68/270 (25%)
Query: 46 GKYKLLKTIGKGNFAKVKLA-----KHVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMK 100
+K+ IG+G F + LA + V + +K+ P LF E++ +
Sbjct: 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKV------EPSDNGPLFTELKFYQ 88
Query: 101 MLDHPNIVKLFQVIETEKTL-------------------YLVMEYASGGEVFDYLVLHGR 141
P ++ + K L +++M+ G ++ + +
Sbjct: 89 RAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAK 147
Query: 142 MKEKEARAKF---------RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMN--IKIADFG 190
+F +I+ ++Y H+ + +H D+KA NLLL+ + + + D+G
Sbjct: 148 --------RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYG 199
Query: 191 FSNEFTPGNKLD--------TFCGSPPYAAPELFQGKKY---DGPEVDVWSLGVILYTLV 239
+ + P G+ + + + G D+ LG + +
Sbjct: 200 LAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRG----DLEILGYCMIQWL 255
Query: 240 SGSLPFDG---STLRELRERVLRGKYRIPF 266
+G LP++ ++ +
Sbjct: 256 TGHLPWEDNLKDPKYVRDSKIRYRENIASL 285
Score = 55.5 bits (134), Expect = 3e-08
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLLDSEMN--IKIADFGFSNEFTPGNK 567
+I+ ++Y H+ + +H D+KA NLLL+ + + + D+G + + P
Sbjct: 160 RILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGV 209
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 84.5 bits (208), Expect = 7e-18
Identities = 43/234 (18%), Positives = 70/234 (29%), Gaps = 65/234 (27%)
Query: 47 KYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII--DKTQLNPGSLQK----LFREVRIMK 100
K + + IG+G F +V VAIKII + L GS QK + E+ I K
Sbjct: 21 KLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISK 78
Query: 101 ML---------DHPNIVKLFQV------------------------------IETEKTLY 121
L + L V + L+
Sbjct: 79 ELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLF 138
Query: 122 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAENLLLDS 180
+V+E+ GG + + A++ Q+ +++ + HRDL N+LL
Sbjct: 139 IVLEFEFGGIDLEQMRTK-LSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKK 197
Query: 181 EMNIKIADFGFSNEFTPGN------------KLDTFCGSPPYA----APELFQG 218
K+ T + G + +LF G
Sbjct: 198 TSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTG 251
Score = 61.1 bits (147), Expect = 4e-10
Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 18/120 (15%)
Query: 483 TEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAE 541
+ L++V+E+ GG + + A++ Q+ +++ + HRDL
Sbjct: 133 KDDQLFIVLEFEFGGIDLEQMRTK-LSSLATAKSILHQLTASLAVAEASLRFEHRDLHWG 191
Query: 542 NLLLDSEMNIKIADFGFSNEFTPGN------------KLDTFCGSPPYA----APELFQG 585
N+LL K+ T + G + +LF G
Sbjct: 192 NVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTG 251
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 81.3 bits (201), Expect = 9e-17
Identities = 43/271 (15%), Positives = 95/271 (35%), Gaps = 54/271 (19%)
Query: 46 GKYKLLKTIGKGNFAKVKLAKHVPTG--------KEVAIKIIDKTQLNPGSLQKLFREVR 97
++KL + N + A T ++ ++K+ K +LF E
Sbjct: 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDG-------RLFNEQN 94
Query: 98 IMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDY--LV--LHGR----MKEKEARA 149
+ P V ++ + + L + G Y LV GR + +
Sbjct: 95 FFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKH 154
Query: 150 KF---------RQIVSAVQYCHQKKIIHRDLKAENLLL--DSEMNIKIADFGFSNEFTPG 198
+++ A+++ H+ + +H ++ AEN+ + + + + +A +GF+ + P
Sbjct: 155 VLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPS 214
Query: 199 --------NKLDTFCGSPPYAAPELFQGKKY---DGPEVDVWSLGVILYTLVSGSLPFDG 247
G + + +L +G D+ SLG + + G LP+
Sbjct: 215 GKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRS----DLQSLGYCMLKWLYGFLPWTN 270
Query: 248 ---STLRELRERVLRGKYRIPFYMSTDCENL 275
+T ++++ PF C +
Sbjct: 271 CLPNTEDIMKQKQKFVDKPGPF--VGPCGHW 299
Score = 55.9 bits (135), Expect = 2e-08
Identities = 11/50 (22%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 520 QIVSAVQYCHQKKIIHRDLKAENLLL--DSEMNIKIADFGFSNEFTPGNK 567
+++ A+++ H+ + +H ++ AEN+ + + + + +A +GF+ + P K
Sbjct: 167 RLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGK 216
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 71.1 bits (174), Expect = 2e-13
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 152 RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS-NEFTPGNKLDTFCGSPPY 210
Q+ +++ +K IHRDL A N+LL + +KI DFG + + + + + P
Sbjct: 200 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 211 A--APELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDG-STLRELRERVLRGKYRIP 265
APE + Y + DVWS GV+L+ + S G+ P+ G E R+ G R+
Sbjct: 260 KWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMR 316
Score = 63.4 bits (154), Expect = 8e-11
Identities = 35/168 (20%), Positives = 61/168 (36%), Gaps = 12/168 (7%)
Query: 49 KLLKTIGKGNFAKVKLAK-----HVPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLD 103
KL K +G+G F +V A T + VA+K++ K + L E++I+ +
Sbjct: 25 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSELKILIHIG 83
Query: 104 -HPNIVKLF-QVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYC 161
H N+V L + L +++E+ G + YL R K E + Q
Sbjct: 84 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL----RSKRNEFVPYKTKGARFRQGK 139
Query: 162 HQKKIIHRDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP 209
I DLK + S + + F + + +
Sbjct: 140 DYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYK 187
Score = 54.2 bits (130), Expect = 6e-08
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 519 RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFS 559
Q+ +++ +K IHRDL A N+LL + +KI DFG +
Sbjct: 200 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 240
Score = 31.4 bits (71), Expect = 1.1
Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 4/97 (4%)
Query: 480 VIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLK 539
+ L +++E+ G + YL R K E + Q I DLK
Sbjct: 95 CTKPGGPLMVIVEFCKFGNLSTYL----RSKRNEFVPYKTKGARFRQGKDYVGAIPVDLK 150
Query: 540 AENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPP 576
+ S + + F + + +
Sbjct: 151 RRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYK 187
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 58.3 bits (140), Expect = 8e-09
Identities = 47/269 (17%), Positives = 78/269 (28%), Gaps = 87/269 (32%)
Query: 50 LLKTIGK---------GNFAKVKLAKHVPTGKEVAIKIIDKT--QLNPGSLQKLFREVRI 98
L I + N+ V K II+ + L P +K+F + +
Sbjct: 329 RLSIIAESIRDGLATWDNWKHVNCDKL--------TTIIESSLNVLEPAEYRKMFDRLSV 380
Query: 99 MKMLDHPNI-VKLFQVIETEKTLYLVMEYASGGEVFDY-LV----------LHG-----R 141
+I L +I + VM + ++ Y LV + +
Sbjct: 381 FP--PSAHIPTILLSLIWFDVIKSDVMVVVN--KLHKYSLVEKQPKESTISIPSIYLELK 436
Query: 142 MKEKEARAKFRQIVSAVQYCHQKKIIHRDL------------------KAENLLLDSEMN 183
+K + A R IV Y K DL E+ +
Sbjct: 437 VKLENEYALHRSIVD--HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFR 494
Query: 184 IKIADFGFSNEFTPGNKL---DTFCGSPPYAAPELFQGKKY------DGPEVDVWSLGVI 234
+ DF F K+ T + L Q K Y + P+ +
Sbjct: 495 MVFLDFRFL-----EQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYE------- 542
Query: 235 LYTLVSGSLPFDGSTLRELRERVLRGKYR 263
LV+ L F L ++ E ++ KY
Sbjct: 543 --RLVNAILDF----LPKIEENLICSKYT 565
Score = 51.8 bits (123), Expect = 8e-07
Identities = 85/590 (14%), Positives = 159/590 (26%), Gaps = 189/590 (32%)
Query: 36 SRRERD----EPHI--GKYKLLKTI-GKGN-----FAKVKLAKHVPTGKEVAIKIIDKTQ 83
S+ E D G +L T+ K F + L + IK +
Sbjct: 47 SKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMS-PIKTEQR-- 103
Query: 84 LNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYL---VMEYASGGEVFDYLVLHG 140
P + +++ E R D+ K V + L L ++E +++ G
Sbjct: 104 -QPSMMTRMYIEQRDRLYNDNQVFAKYN-VSRLQPYLKLRQALLELRPA----KNVLIDG 157
Query: 141 RMK--------------EKEARAKFRQI--VSAVQYCHQKKIIHRDLKAENLLLDSEMNI 184
+ K +I ++ ++ C+ + + L + LL + N
Sbjct: 158 -VLGSGKTWVALDVCLSYKVQCKMDFKIFWLN-LKNCNSPETVLEML--QKLLYQIDPNW 213
Query: 185 KIADFGFSNEFTPGNKLDTFCGSPPYAAPELFQGKKY-------DGPEVDVWSLGVILYT 237
SN + + L + K Y +V +
Sbjct: 214 TSRSDHSSNIKLRIHSIQA-------ELRRLLKSKPYENCLLVLL----NVQNAKAWNA- 261
Query: 238 LVSGSLPFDGS--TLRELRER----VLRGKYRIPFYMS--------TDCENLLKKFLVLN 283
F+ S L R + L + + ++LL K+L
Sbjct: 262 -------FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR 314
Query: 284 PAKRASLEVSGEVTLGGAPVTSSG-GA----GTNHTHNSSISPAPTNFKRQNTIDSASIK 338
P ++ EV L P S G N N + TI +S+
Sbjct: 315 PQ-----DLPREV-LTTNPRRLSIIAESIRDGLATWDNWK----HVNCDKLTTIIESSLN 364
Query: 339 ENTARLNAG--RPAKNTASIAPLDTK----ALVGL--GYSRSEIEESLSQ-AKYDDPESD 389
L R + S+ P L + +S++ +++ KY E
Sbjct: 365 V----LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ 420
Query: 390 GSRSGSSLSLRNLQPGSGGGATGGSGSSRSWRNMQPGSGGVATGGSGGGGGGGAAQSPSH 449
S++S+ ++ ++ + +
Sbjct: 421 PKE--STISIPSIY-----------------LELK-------------------VKLENE 442
Query: 450 RGVHRSISASNAKPSRRASSGGETLLKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRM 509
+HRSI P + S L Q Y + ++ H +
Sbjct: 443 YALHRSIVDHYNIP-KTFDSDDLIPPYLDQ--------Y----------FYSHIGHH--L 481
Query: 510 KEKEARAK---FRQIVSAVQYCH----QKKIIHRDLKAE------NLLLD 546
K E + FR + + ++KI H N L
Sbjct: 482 KNIEHPERMTLFRMV-----FLDFRFLEQKIRHDSTAWNASGSILNTLQQ 526
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP,
manganese, transferase; HET: ADP; 1.89A {Archaeoglobus
fulgidus} PDB: 1zp9_A* 1ztf_A*
Length = 258
Score = 45.4 bits (107), Expect = 3e-05
Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 29/164 (17%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGK--EVAIKI--------------------IDKTQLN 85
+ I G A V A V GK +A+KI D +++
Sbjct: 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRIS 108
Query: 86 PGSLQKL--FREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLV--LHGR 141
P + +E R ++ V + Q K + L+ME+ E+ + L
Sbjct: 109 PKEKVFIWTEKEFRNLERA-KEAGVSVPQPYTYMKNV-LLMEFIGEDELPAPTLVELGRE 166
Query: 142 MKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAENLLLDSEMNI 184
+KE + F +V V+ +Q+ +++H DL N++ ++
Sbjct: 167 LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYIDKVYF 210
Score = 37.3 bits (86), Expect = 0.011
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 489 LVMEYASGGEVFDYLV--LHGRMKEKEARAKFRQIVSAVQYCHQK-KIIHRDLKAENLLL 545
L+ME+ E+ + L +KE + F +V V+ +Q+ +++H DL N++
Sbjct: 145 LLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMY 204
Query: 546 DSEMNI 551
++
Sbjct: 205 IDKVYF 210
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn
complex, rRNA processing, transferase; HET: ADP; 1.75A
{Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB:
1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Length = 282
Score = 43.4 bits (102), Expect = 1e-04
Identities = 25/159 (15%), Positives = 51/159 (32%), Gaps = 29/159 (18%)
Query: 48 YKLLKTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLN----------------PGSLQK 91
+ K +G+G + V E +K + +++
Sbjct: 92 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 150
Query: 92 LFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKF 151
E R ++ L + K++ ++ME E++ + +
Sbjct: 151 ARNEFRALQKLQGLAVPKVYAWEGNA----VLMELIDAKELYRV-------RVENPDEVL 199
Query: 152 RQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFG 190
I+ V + + I+H DL N+L+ E I DF
Sbjct: 200 DMILEEVAKFYHRGIVHGDLSQYNVLVSEEGIWII-DFP 237
Score = 34.9 bits (80), Expect = 0.074
Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 8/69 (11%)
Query: 489 LVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSE 548
++ME E++ + + I+ V + + I+H DL N+L+ E
Sbjct: 177 VLMELIDAKELYRV-------RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE 229
Query: 549 MNIKIADFG 557
I DF
Sbjct: 230 GIWII-DFP 237
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 42.0 bits (98), Expect = 7e-04
Identities = 44/252 (17%), Positives = 67/252 (26%), Gaps = 115/252 (45%)
Query: 20 ENNISSSRLMSSRRESSRRERDEPHIGKYKLLKTIGKGNFAKVKLAKHVPTGKEVAIKII 79
ENN M S ++ + + + K N H+P GK+V I ++
Sbjct: 329 ENNEGVPSPMLSISNLTQEQ----------VQDYVNKTN-------SHLPAGKQVEISLV 371
Query: 80 D-KTQL----NPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVFD 134
+ L P SL L +R K A G
Sbjct: 372 NGAKNLVVSGPPQSLYGLNLTLRKAK--------------------------APSG---- 401
Query: 135 YLVLHGRMKEKEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGFSNE 194
++R F + R LK FSN
Sbjct: 402 ---------LDQSRIPFSE---------------RKLK------------------FSNR 419
Query: 195 FTPGNKLDTFCGSP---PY---AAPELFQGKKYDGPEVDVWSLGVILY-TLVSGSLPFDG 247
F P SP A+ + + + + + + +Y T FDG
Sbjct: 420 FLP-------VASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDT-------FDG 465
Query: 248 STLRELRERVLR 259
S LR L +
Sbjct: 466 SDLRVLSGSISE 477
Score = 39.6 bits (92), Expect = 0.004
Identities = 57/364 (15%), Positives = 92/364 (25%), Gaps = 157/364 (43%)
Query: 217 QG--KK------YDGPEV--DVW---------SLGVILYTLVSGSLP------FDGSTLR 251
QG ++ Y + DVW + G + +V + P F G +
Sbjct: 1624 QGSQEQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINN-PVNLTIHFGGEKGK 1682
Query: 252 ELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPAKRASLEVSGEVTLGGAPVTSSGGAGT 311
+RE Y + E ++ K + ++ E+ T G
Sbjct: 1683 RIREN----------YSAMIFETIVD-------GKLKTEKIFKEINEHSTSYTFRSEKGL 1725
Query: 312 -NHTHNSSISPAPTNFKRQNTIDSASIKENTARLNAGRPAKNTASIA-----------PL 359
+ T T Q PA A P
Sbjct: 1726 LSATQF-------T----Q-------------------PALTLMEKAAFEDLKSKGLIPA 1755
Query: 360 DTKALVG--LG-YSRSEIEESL-SQAKYDDPESDGSRSGSSLSLRNLQPGSGGGATGGSG 415
D G LG Y+ +L S A E + R G +
Sbjct: 1756 D-ATFAGHSLGEYA------ALASLADVMSIE-SLVE---VVFYR-------GMTMQVA- 1796
Query: 416 SSRSWRNMQPGSGGVATGGSGGGGGGGAAQSPSHRGVHRSISASNAKPSRRASSGGETLL 475
V G G A P R A+S + L
Sbjct: 1797 --------------VPRDELGRSNYGMIA----------------INPGRVAASFSQEAL 1826
Query: 476 KLFQVIET--EKTLYLVMEYA----SGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCH 529
+ V+E ++T +LV E + V G + A +++ +
Sbjct: 1827 Q--YVVERVGKRTGWLV-EIVNYNVENQQY----VAAG---DLRALDTVTNVLN---FIK 1873
Query: 530 QKKI 533
+KI
Sbjct: 1874 LQKI 1877
Score = 34.3 bits (78), Expect = 0.19
Identities = 53/398 (13%), Positives = 118/398 (29%), Gaps = 114/398 (28%)
Query: 38 RERDEPHIGKYK-LLKTIGKGNFAKVKLAKHVPTGKEV---AIKIIDKTQLNPGSLQKLF 93
+ +G++ +L F L G ++ A K++ + ++L
Sbjct: 70 SLVEPSKVGQFDQVLNLC-LTEFENCYLE-----GNDIHALAAKLLQENDTTLVKTKELI 123
Query: 94 R---EVRIM--KMLDHPNIVKLFQVIETEKT-LYLVMEYASGG-----EVFD-----YLV 137
+ RIM + D + LF+ + L + GG + F+ Y
Sbjct: 124 KNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIF----GGQGNTDDYFEELRDLYQT 179
Query: 138 LHGRMKE--KEARAKFRQIVSAVQYCHQKKIIHRDLKAENLLLDSEMNIKIADFGF--SN 193
H + + K + +++ +K+ + L L + D + S
Sbjct: 180 YHVLVGDLIKFSAETLSELIRTTLDA--EKVFTQGLNILEWLENPS---NTPDKDYLLSI 234
Query: 194 EFT-PGNKLDTFC---------GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 243
+ P + G P +G S G++ ++ +
Sbjct: 235 PISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKG-------ATGHSQGLVTAVAIAET- 286
Query: 244 PFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKF--LVLNPAKRASLEVSGEVTLGGA 301
+ V + + F++ C + + L P+ + E G
Sbjct: 287 ----DSWESFFVSVRKA-ITVLFFIGVRC---YEAYPNTSLPPSILEDSLENNE----GV 334
Query: 302 PVTSSGGAGTNHTHNSSISP--APTNFKRQNTIDSASIKENTARLNAGRPAKNTASIA-- 357
P SP + +N + +++ + N+ PA I+
Sbjct: 335 P-----------------SPMLSISNLTQ------EQVQDYVNKTNSHLPAGKQVEISLV 371
Query: 358 -----------PLDTKALVGLGYS--RSEIEESLSQAK 382
P ++L GL + +++ L Q++
Sbjct: 372 NGAKNLVVSGPP---QSLYGLNLTLRKAKAPSGLDQSR 406
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold,
diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Length = 238
Score = 34.0 bits (78), Expect = 0.11
Identities = 16/100 (16%), Positives = 19/100 (19%), Gaps = 9/100 (9%)
Query: 362 KALVGLGYSRSEIEESLSQAKYDDPESDGSRSGSSLSLRNLQPG---------SGGGATG 412
L + YS S S+ SL L P G T
Sbjct: 40 HGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYFCASGDLGQTN 99
Query: 413 GSGSSRSWRNMQPGSGGVATGGSGGGGGGGAAQSPSHRGV 452
+ G QSP V
Sbjct: 100 ERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTV 139
>1ixr_A Holliday junction DNA helicase RUVA; heterooligomeric complex,
octameric RUVA, AAA-ATPase domain, complex with
nucleotide, hydrolase; HET: ANP; 3.30A {Thermus
thermophilus} SCOP: a.60.2.1 b.40.4.2
Length = 191
Score = 33.7 bits (78), Expect = 0.12
Identities = 5/27 (18%), Positives = 12/27 (44%)
Query: 363 ALVGLGYSRSEIEESLSQAKYDDPESD 389
AL LG+ ++ + +P++
Sbjct: 152 ALAALGFKEAQARAVVLDLLAQNPKAR 178
>2ztd_A Holliday junction ATP-dependent DNA helicase RUVA; recombination,
branch migration, DNA BIND oligomerization, acidic PIN;
2.40A {Mycobacterium tuberculosis} PDB: 2ztc_A 2zte_A
2h5x_A 1bvs_A
Length = 212
Score = 32.6 bits (75), Expect = 0.26
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 363 ALVGLGYSRSEIEESLSQAKYDDPESD 389
ALVGLG++ + EE+ + ++
Sbjct: 170 ALVGLGFAAKQAEEATDTVLAANHDAT 196
>3ntt_A Capsid protein; gene therapy vector, cystic fibros sialic acid
receptor, icosahedral virus; 3.45A {Adeno-associated
virus - 5}
Length = 724
Score = 32.5 bits (73), Expect = 0.59
Identities = 20/94 (21%), Positives = 28/94 (29%)
Query: 362 KALVGLGYSRSEIEESLSQAKYDDPESDGSRSGSSLSLRNLQPGSGGGATGGSGSSRSWR 421
K V + E + + R + + S G SGS +
Sbjct: 121 KKRVLEPFGLVEEGAKTAPTGKRIDDHFPKRKKARTEEDSKPSTSSDAEAGPSGSQQLQI 180
Query: 422 NMQPGSGGVATGGSGGGGGGGAAQSPSHRGVHRS 455
QP S A S GGGG + GV +
Sbjct: 181 PAQPASSLGADTMSAGGGGPLGDNNQGADGVGNA 214
Score = 31.4 bits (70), Expect = 1.3
Identities = 19/95 (20%), Positives = 26/95 (27%)
Query: 350 AKNTASIAPLDTKALVGLGYSRSEIEESLSQAKYDDPESDGSRSGSSLSLRNLQPGSGGG 409
AK + + I++ + K E D S SS +
Sbjct: 120 AKKRVLEPFGLVEEGAKTAPTGKRIDDHFPKRKKARTEEDSKPSTSSDAEAGPSGSQQLQ 179
Query: 410 ATGGSGSSRSWRNMQPGSGGVATGGSGGGGGGGAA 444
SS M G GG + G G G A
Sbjct: 180 IPAQPASSLGADTMSAGGGGPLGDNNQGADGVGNA 214
>2q83_A YTAA protein; 2635576, structural genomics, joint center for
structu genomics, JCSG, protein structure initiative,
PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus
subtilis}
Length = 346
Score = 32.3 bits (73), Expect = 0.60
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 166 IIHRDLKAENLLLDSEMNIKIADFGFS 192
+ H+D N LL I + D
Sbjct: 224 LCHQDYGTGNTLLGENEQIWVIDLDTV 250
Score = 32.3 bits (73), Expect = 0.60
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 533 IIHRDLKAENLLLDSEMNIKIADFGFS 559
+ H+D N LL I + D
Sbjct: 224 LCHQDYGTGNTLLGENEQIWVIDLDTV 250
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide
3-kinase gamma, secondary messenger generation, PI3K, PI
3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP:
a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A*
1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A*
3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A*
3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Length = 961
Score = 32.1 bits (72), Expect = 0.67
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 13/112 (11%)
Query: 110 LFQVIETEKTLYLVMEYASG--GEVFDYLVLH-----GRMKEKEARAKFRQIVSAVQYCH 162
+ ++++ T+ + + G G D ++ H ++EK A R + S YC
Sbjct: 737 MIEIVKDATTIAKIQQSTVGNTGAFKDEVLSHWLKEKCPIEEKFQAAVERFVYSCAGYCV 796
Query: 163 QKKIIH-RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 213
++ D +N+++ N+ DFG F G P
Sbjct: 797 ATFVLGIGDRHNDNIMISETGNLFHIDFGHILGNYKS-----FLGINKERVP 843
Score = 32.1 bits (72), Expect = 0.67
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 13/112 (11%)
Query: 477 LFQVIETEKTLYLVMEYASG--GEVFDYLVLH-----GRMKEKEARAKFRQIVSAVQYCH 529
+ ++++ T+ + + G G D ++ H ++EK A R + S YC
Sbjct: 737 MIEIVKDATTIAKIQQSTVGNTGAFKDEVLSHWLKEKCPIEEKFQAAVERFVYSCAGYCV 796
Query: 530 QKKIIH-RDLKAENLLLDSEMNIKIADFGFSNEFTPGNKLDTFCGSPPYAAP 580
++ D +N+++ N+ DFG F G P
Sbjct: 797 ATFVLGIGDRHNDNIMISETGNLFHIDFGHILGNYKS-----FLGINKERVP 843
>3p0s_A Capsid protein VP; icosahedral virus capsid, virus-like particle,
capsid protei barrel; 3.10A {Bombyx mori densovirus 1}
Length = 494
Score = 31.8 bits (71), Expect = 0.82
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 20/90 (22%)
Query: 400 RNLQPGSGGGATGGSGSSRSWRNMQPGSGGVATGGSGGGGGGGAA------------QSP 447
++QP GAT ++ + P +GG A GGSGG G GG+A Q
Sbjct: 3 EDIQPMETVGATDTGAGAQ----VDPRTGGQAAGGSGGMGAGGSANDGRQDIFSGAPQPN 58
Query: 448 SHRGVHRSIS----ASNAKPSRRASSGGET 473
H + S +N P R + +
Sbjct: 59 QHHTLVYGKSYHFTITNGLPEFRHLATTNS 88
>1cuk_A RUVA protein; DNA repair, SOS response, DNA-binding, DNA
recombination; 1.90A {Escherichia coli} SCOP: a.5.1.1
a.60.2.1 b.40.4.2 PDB: 1hjp_A 1bdx_A* 1c7y_A 1d8l_A
Length = 203
Score = 30.8 bits (70), Expect = 1.0
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 363 ALVGLGYSRSEIEESLSQAKYDDPESD 389
LV LGY E +S+ D S+
Sbjct: 166 RLVALGYKPQEASRMVSKIARPDASSE 192
>3o0g_D Cyclin-dependent kinase 5 activator 1; kinase activator complex,
kinase inhibitor complex, transferase-transferase
activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB:
1h4l_D
Length = 149
Score = 30.3 bits (68), Expect = 1.3
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 233 VILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
V LY L + + + EL+ +L Y YM + LK FLV +
Sbjct: 58 VFLYMLCRDVISSEVGSDHELQAVLLTCLYLSYSYMGNEISYPLKPFLVES 108
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta
protein, PIK3C3, compound 15E, structural genomics, SGC
stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Length = 614
Score = 31.4 bits (70), Expect = 1.3
Identities = 18/94 (19%), Positives = 28/94 (29%), Gaps = 6/94 (6%)
Query: 110 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE---KEARAKFRQIVSAVQYCHQKKI 166
Q I++ ++ S F E + + S YC I
Sbjct: 416 FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVK--SCAGYCVITYI 473
Query: 167 IH-RDLKAENLLLDSEMNIKIADFGFSNEFTPGN 199
+ D +NLLL + DFG+ P
Sbjct: 474 LGVGDRHLDNLLLTKTGKLFHIDFGYILGRDPKP 507
Score = 31.4 bits (70), Expect = 1.3
Identities = 18/94 (19%), Positives = 28/94 (29%), Gaps = 6/94 (6%)
Query: 477 LFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKE---KEARAKFRQIVSAVQYCHQKKI 533
Q I++ ++ S F E + + S YC I
Sbjct: 416 FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVK--SCAGYCVITYI 473
Query: 534 IH-RDLKAENLLLDSEMNIKIADFGFSNEFTPGN 566
+ D +NLLL + DFG+ P
Sbjct: 474 LGVGDRHLDNLLLTKTGKLFHIDFGYILGRDPKP 507
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta
isoform; transferase, phosphoinositide 3-kinase, RTK;
HET: GD9; 3.30A {Mus musculus}
Length = 1092
Score = 31.4 bits (70), Expect = 1.4
Identities = 10/96 (10%), Positives = 26/96 (27%), Gaps = 3/96 (3%)
Query: 105 PNIVKLFQVIETEKTLYLVMEYASGGEVFDYLVLHGRMKEKEARAKFRQIVSAVQYCHQK 164
+ + + + + + A +F +S YC
Sbjct: 877 STSETIADIQLNSSNVAATAAFNKDALLNWLKEYNSGDDLDRAIEEF--TLSCAGYCVAS 934
Query: 165 KIIH-RDLKAENLLLDSEMNIKIADFGFSNEFTPGN 199
++ D ++N+++ + DFG
Sbjct: 935 YVLGIGDRHSDNIMVKKTGQLFHIDFGHILGNFKSK 970
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets,
alpha helices, AMY amyloidosis, blood coagulation,
disease mutation, glycoprot phosphoprotein; HET: NAG NDG
BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A*
2a45_G*
Length = 562
Score = 31.0 bits (69), Expect = 1.4
Identities = 22/92 (23%), Positives = 31/92 (33%), Gaps = 12/92 (13%)
Query: 351 KNTASIAPLDTKALVGLGYSRSEIEESLSQAKYDDPESDGSRSGSSLSLRNLQPGSGGGA 410
K+ P + KAL + R E+E P + G S + GS +
Sbjct: 219 KSQLQKVPPEWKALTDMPQMRMELER---------PGGNEITRGGST---SYGTGSETES 266
Query: 411 TGGSGSSRSWRNMQPGSGGVATGGSGGGGGGG 442
S+ SW + G G G G GG
Sbjct: 267 PRNPSSAGSWNSGSSGPGSTGNRNPGSSGTGG 298
Score = 30.2 bits (67), Expect = 2.9
Identities = 16/66 (24%), Positives = 24/66 (36%)
Query: 384 DDPESDGSRSGSSLSLRNLQPGSGGGATGGSGSSRSWRNMQPGSGGVATGGSGGGGGGGA 443
+ S S + + PGS G GS + +PGS G + GS G G
Sbjct: 263 ETESPRNPSSAGSWNSGSSGPGSTGNRNPGSSGTGGTATWKPGSSGPGSTGSWNSGSSGT 322
Query: 444 AQSPSH 449
+ +
Sbjct: 323 GSTGNQ 328
Score = 30.2 bits (67), Expect = 2.9
Identities = 26/177 (14%), Positives = 44/177 (24%), Gaps = 13/177 (7%)
Query: 295 EVTLGGAPVTSSGGAGTNHTHNSSISPAPTNFKRQNTIDSASIKENTARLNAGRPAKNTA 354
+ L G+ S + +P N + +S S G
Sbjct: 239 RMELERPGGNEITRGGSTSYGTGSETESPRNPSSAGSWNSGSS-------GPGSTGNRNP 291
Query: 355 SIAPLDTKALVGLGYSRSEIEESLSQAKYDDPESDGSRSGSSLSLRNLQPGSGGGATGGS 414
+ A G S + S G+ S + + + +PGS G GS
Sbjct: 292 GSSGTGGTATWKPGSSGP------GSTGSWNSGSSGTGSTGNQNPGSPRPGSTGTWNPGS 345
Query: 415 GSSRSWRNMQPGSGGVATGGSGGGGGGGAAQSPSHRGVHRSISASNAKPSRRASSGG 471
S + S + G G G R + + +
Sbjct: 346 SERGSAGHWTSESSVSGSTGQWHSESGSFRPDSPGSGNARPNNPDWGTFEEVSGNVS 402
Score = 29.8 bits (66), Expect = 3.7
Identities = 18/88 (20%), Positives = 28/88 (31%), Gaps = 1/88 (1%)
Query: 385 DPESDGSRSGSSLSLRNLQPGSGGGATGGSGSSRSWRNMQPGSGGVATGGSGGGGGGGAA 444
+P S S + + GS G SGS R + G+ G
Sbjct: 342 NPGSSERGSAGHWTSESSVSGSTGQWHSESGSFRP-DSPGSGNARPNNPDWGTFEEVSGN 400
Query: 445 QSPSHRGVHRSISASNAKPSRRASSGGE 472
SP R + + +K + +G E
Sbjct: 401 VSPGTRREYHTEKLVTSKGDKELRTGKE 428
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation,
ribosome inhibitor, hydrolase; HET: CIT; 2.30A
{Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1
PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Length = 551
Score = 31.1 bits (69), Expect = 1.4
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 386 PESDGSR-SGSSLSLRNLQPGSGGGATGGSGSSRS---WRNMQPGSGGVATGGSGGGGGG 441
+ G+ + +++ G GGGA+ GSG S W GGSG G GG
Sbjct: 8 GHNTGAHSTSGNINGGPTGLGVGGGASDGSGWSSENNPWGGGSGSGIH-WGGGSGHGNGG 66
Query: 442 GAAQSPSHRGVHRSISAS 459
G S G ++SA
Sbjct: 67 GNGNSGGGSGTGGNLSAV 84
Score = 29.6 bits (65), Expect = 4.2
Identities = 14/66 (21%), Positives = 19/66 (28%)
Query: 406 SGGGATGGSGSSRSWRNMQPGSGGVATGGSGGGGGGGAAQSPSHRGVHRSISASNAKPSR 465
SGG G + + S G G G G G + + G S
Sbjct: 2 SGGDGRGHNTGAHSTSGNINGGPTGLGVGGGASDGSGWSSENNPWGGGSGSGIHWGGGSG 61
Query: 466 RASSGG 471
+ GG
Sbjct: 62 HGNGGG 67
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen,
beta-turn, immune system; HET: NLE; NMR {Rattus
norvegicus} SCOP: b.1.1.1 b.1.1.1
Length = 257
Score = 30.5 bits (69), Expect = 1.7
Identities = 23/104 (22%), Positives = 34/104 (32%), Gaps = 13/104 (12%)
Query: 389 DGSRSGSSLSLRNLQP----------GSGGGATGGSGSSRSW---RNMQPGSGGVATGGS 435
D S++ L + +LQ GG G W + SGG +GG
Sbjct: 72 DTSKNQVFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGG 131
Query: 436 GGGGGGGAAQSPSHRGVHRSISASNAKPSRRASSGGETLLKLFQ 479
G GGGG + + + S + S L +Q
Sbjct: 132 GSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNINNYLAWYQ 175
>3iax_B Colicin-A; TOLB, TOLB BOX, complex, protein transport, trans
antibiotic, antimicrobial, bacteriocin, cell membrane,
MEMB transmembrane; 2.60A {Citrobacter freundii}
Length = 115
Score = 29.0 bits (64), Expect = 2.3
Identities = 14/47 (29%), Positives = 18/47 (38%)
Query: 404 PGSGGGATGGSGSSRSWRNMQPGSGGVATGGSGGGGGGGAAQSPSHR 450
PG G G S R P GG + G SGG G ++ +
Sbjct: 2 PGFNYGGKGDGTGWSSERGSGPEPGGGSHGNSGGHDRGDSSNVGNES 48
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody,
virus/viral protein/antibiotic complex; 2.30A {Homo
sapiens} SCOP: b.1.1.1 b.1.1.1
Length = 247
Score = 29.9 bits (68), Expect = 2.5
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 426 GSGGVATGGSGGGGGGGAA-QSPS 448
G GG GGSGGGG QSP+
Sbjct: 120 GGGGSGGGGSGGGGSETTLTQSPA 143
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase;
2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A*
2x6j_A* 2x6k_A*
Length = 696
Score = 30.2 bits (67), Expect = 2.7
Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 8/119 (6%)
Query: 89 LQKLFRE------VRIMKMLDHPNIVKLFQVIETEKTLYLVMEYASGGEVF-DYLVLHGR 141
+ KL R + K+L + Q +++ ++ + F +
Sbjct: 463 MDKLLRRENLDLKLTPYKVLATSSKHGFLQYVDSCTVAEVLAREGNIHNFFRKHHPCDNG 522
Query: 142 MKEKEARAKFRQIVSAVQYCHQKKIIH-RDLKAENLLLDSEMNIKIADFGFSNEFTPGN 199
A I S YC ++ D +NLLL + + DFG+ P
Sbjct: 523 PYGISAEVMDTYIKSCAGYCVITYLLGVGDRHLDNLLLTTNGKLFHIDFGYILGRDPKP 581
>1unl_D Cyclin-dependent kinase 5 activator 1; inhibitor, ATP-analogue,
neurodegen diseases; HET: RRC; 2.2A {Homo sapiens} SCOP:
a.74.1.1 PDB: 1unh_D* 1ung_D*
Length = 208
Score = 29.7 bits (66), Expect = 2.9
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 233 VILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLKKFLVLN 283
V LY L + + + EL+ +L Y YM + LK FLV +
Sbjct: 103 VFLYMLCRDVISSEVGSDHELQAVLLTCLYLSYSYMGNEISYPLKPFLVES 153
>4dpv_Z Protein (parvovirus coat protein); complex (virus/DNA), FULL
capsid, single-stranded DNA, icosahedral virus; HET:
DNA; 2.90A {Canine parvovirus} SCOP: b.121.5.2 PDB:
1c8h_A* 1c8d_A 1ijs_P* 1fpv_A 2cas_A 1p5w_A* 1p5y_A
1c8e_A 1c8f_A 1c8g_A
Length = 584
Score = 29.9 bits (66), Expect = 4.0
Identities = 10/48 (20%), Positives = 13/48 (27%)
Query: 406 SGGGATGGSGSSRSWRNMQPGSGGVATGGSGGGGGGGAAQSPSHRGVH 453
G G + G GG GG GG G + +
Sbjct: 3 DGAVQPDGGQPAVRNERATGSGNGSGGGGGGGSGGVGISTGTFNNQTE 50
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin,
CD277, immune system; 3.52A {Mus musculus}
Length = 254
Score = 29.2 bits (66), Expect = 4.4
Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 425 PGSGGVATGGSGGGGGGGAAQSPSHRGVHRSISASNAKPSRRASSGG 471
GG + GG GGGG + S + + S S RAS
Sbjct: 120 GSGGGGSGGGGSGGGGSDIVLTQSPVTLSVTPGDS-VSLSCRASQSI 165
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system;
2.88A {Mus musculus}
Length = 291
Score = 28.1 bits (63), Expect = 9.8
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Query: 426 GSGGVATGGSGGGGGGGAA--QSPS 448
GG + GG GGGG QSPS
Sbjct: 143 RGGGGSGGGGSGGGGSDLVMSQSPS 167
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.312 0.130 0.370
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 10,418,210
Number of extensions: 641609
Number of successful extensions: 3145
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1803
Number of HSP's successfully gapped: 591
Length of query: 708
Length of database: 6,701,793
Length adjustment: 100
Effective length of query: 608
Effective length of database: 3,909,693
Effective search space: 2377093344
Effective search space used: 2377093344
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (27.4 bits)