RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy2650
(108 letters)
>3le2_A Serpin-ZX; apoplast, glycoprotein, protease inhibitor, secreted,
serine protease inhibitor, hydrolase; 2.20A {Arabidopsis
thaliana}
Length = 393
Score = 107 bits (269), Expect = 2e-29
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
S D+ TKL+ NA++FKG W F T++G F+L D N V P M K Y+
Sbjct: 159 GSADSMTKLIFANALYFKGTWNEKFDESLTQEGEFHLLDGNKVTAPFMTSKKKQYVSA-- 216
Query: 86 GEDGFKMLELPYGIGTY 102
DGFK+L LPY G
Sbjct: 217 -YDGFKVLGLPYLQGQD 232
>1m93_B Serine proteinase inhibitor 2; serpin, CRMA, apoptosis, ICE
inhibitor, viral protein; 1.65A {Cowpox virus} SCOP:
e.1.1.1
Length = 245
Score = 104 bits (261), Expect = 4e-29
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 24 FTDSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYE 83
+ L T L+ I+A++FK KW +PF+ E T D PFY+ T V V +M + + +
Sbjct: 60 LDEPLSPDTSLLAISAVYFKAKWLMPFEKEFTSDYPFYVSPTEMVDVSMMSMYGEAFNHA 119
Query: 84 EAGE--DGFKMLELPY 97
E F ++ELPY
Sbjct: 120 SVKESFGNFSIIELPY 135
>3kcg_I Antithrombin-III, ATIII; michaelis complex, blood coagulation,
calcium, disulfide bond, EGF-like domain, glycoprotein,
hemophilia, hydrolase; HET: NAG FUC MAN NTP; 1.70A {Homo
sapiens} PDB: 1e04_I* 1ath_A 1ant_L* 1br8_L 1azx_I*
1dzh_L* 1e03_L* 1dzg_L* 1e05_L* 1jvq_L* 1lk6_L* 1nq9_I*
1oyh_L* 1r1l_L* 1sr5_A* 2ant_L* 2beh_L* 2hij_L* 2znh_A*
3evj_I* ...
Length = 432
Score = 106 bits (268), Expect = 5e-29
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 22 VFFTDSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYM 81
V +++++ T LVL+N I+FKG W F PE T+ FY D S +M+ + F
Sbjct: 201 VIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRY 260
Query: 82 YEEAGEDGFKMLELPY 97
+G ++LELP+
Sbjct: 261 RRV--AEGTQVLELPF 274
>1f0c_A ICE inhibitor; apoptosis, caspase inhibitor, protease inhibitor,
serpin, viral protein; 2.26A {Cowpox virus} SCOP:
e.1.1.1 PDB: 1c8o_A
Length = 305
Score = 104 bits (261), Expect = 1e-28
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 24 FTDSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYE 83
+ L T L+ I+A++FK KW +PF+ E T D PFY+ T V V +M + + +
Sbjct: 115 LDEPLSPDTCLLAISAVYFKAKWLMPFEKEFTSDYPFYVSPTEMVDVSMMSMYGEAFNHA 174
Query: 84 EAGE--DGFKMLELPY 97
E F ++ELPY
Sbjct: 175 SVKESFGNFSIIELPY 190
>3ozq_A Serpin48; SPE, hydrolase I; 1.90A {Tenebrio molitor}
Length = 376
Score = 104 bits (263), Expect = 1e-28
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
+ L+ T++VLINA++F KW VPF P T+ F+ VQV M++ + ++ Y E
Sbjct: 155 EILNNLTRVVLINALYFNAKWLVPFPPFHTRKSDFHKSAKEVVQVDTMYLDEQYFNYYEC 214
Query: 86 GEDGFKMLELPY 97
K+LELP+
Sbjct: 215 HHLDAKLLELPF 226
>2pef_A Serine protease inhibitor; serpin; 1.60A {Thermoanaerobacter
tengcongensis} PDB: 2vh4_A 2pee_A
Length = 373
Score = 104 bits (262), Expect = 2e-28
Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
+ +D + LINA+ F +W ++ + + F N +V M +++ Y+
Sbjct: 150 NKIDPEDVMYLINAVAFDAEWETVYEKASVHEDIFTDVYGNRQKVEFMNSEENLYI---- 205
Query: 86 GEDGFKMLELPY 97
E+ PY
Sbjct: 206 EEENAVGFVKPY 217
>3sto_A Serine protease inhibitor; serpin fold, hydrolase inhibitor; 2.41A
{Schistosoma haematobium}
Length = 406
Score = 104 bits (262), Expect = 2e-28
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 24 FTDSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYE 83
FTD + T ++L+N +F+ W PF+P T+ FY+ + V +M + +
Sbjct: 176 FTDDIPDDTAMILVNVFYFRDFWQSPFEPHYTRKEDFYISPDRQITVDMMTQEGVMKYGK 235
Query: 84 EAGEDGFKMLELPY 97
++GF+++ P
Sbjct: 236 FE-DEGFEIVSKPL 248
>3nda_A Serpin-2; vaccination target, TICK, hydrolase inhibitor; HET: 1PE;
1.80A {Ixodes ricinus}
Length = 377
Score = 104 bits (261), Expect = 3e-28
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 24 FTDSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYE 83
F + LD T LVL+NAI+FKG+W F E T+ F+ V+V M ++
Sbjct: 154 FNEPLDPDTLLVLLNAIYFKGEWNTAFVKEHTEKRQFFNGGVTPVEVDTMRLEARIKYRF 213
Query: 84 EAGEDGFKMLELPY 97
+ +++ELPY
Sbjct: 214 FD-DLQVEVVELPY 226
>1lj5_A Plasminogen activator inhibitor-1; beta-barrell, blood clotting;
1.80A {Homo sapiens} SCOP: e.1.1.1 PDB: 1dvn_A 1c5g_A
1a7c_A* 3q02_A 3q03_A 3r4l_A* 1oc0_A 1b3k_A 3pb1_I
1dvm_A 3eox_A 3cvm_A 1db2_A 9pai_A 3lw2_A 9pai_B
Length = 379
Score = 103 bits (260), Expect = 4e-28
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYE-- 83
++D T+LVL+NA++F G+W PF +T F+ D ++V VP+M + F E
Sbjct: 155 GAVDQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFT 214
Query: 84 EAGEDGFKMLELPY 97
+ +LELPY
Sbjct: 215 TPDGHYYDILELPY 228
>2h4r_A MENT, heterochromatin-associated protein MENT; serine protease
inhibitor, serpin, hydrolase inhibitor; 2.70A {Gallus
gallus} PDB: 2dut_A
Length = 415
Score = 104 bits (261), Expect = 4e-28
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
D + A+T+L+L+NAI+FK +W V F+ E T PF L S V +M+++D+F +
Sbjct: 184 DDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVKMMYMRDTFPVLIME 243
Query: 86 GEDGFKMLELPY 97
+ FKM+ELPY
Sbjct: 244 -KMNFKMIELPY 254
>2h4p_A MENT, heterochromatin-associated protein MENT; serine protease
inhibitor, serpin, hydrolase inhibitor; 1.70A {Gallus
gallus} PDB: 2h4q_A
Length = 394
Score = 103 bits (260), Expect = 4e-28
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
D + A+T+L+L+NAI+FK +W V F+ E T PF L S V +M+++D+F +
Sbjct: 204 DDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVKMMYMRDTFPVLIME 263
Query: 86 GEDGFKMLELPY 97
+ FKM+ELPY
Sbjct: 264 -KMNFKMIELPY 274
>2arr_A Plasminogen activator inhibitor-2; serpin, peptide binding,
hydrolase inhibitor-PEPT complex; 1.55A {Homo sapiens}
PDB: 2arq_A 1jrr_A 1by7_A
Length = 382
Score = 103 bits (259), Expect = 5e-28
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
S+D T++VL+NA++FKGKW PF+ + PF ++ V +M++++
Sbjct: 155 GSVDGDTRMVLVNAVYFKGKWKTPFEKKLNGLFPFRVNSAQRTPVQMMYLREKLN-IGYI 213
Query: 86 GEDGFKMLELPYG 98
+ ++LELPY
Sbjct: 214 EDLKAQILELPYA 226
>1wz9_A Maspin precursor; serpin, tumor suppressor, serpinb5, signaling
protein; HET: CME; 2.10A {Homo sapiens} PDB: 1xu8_A
1xqg_A 1xqj_A
Length = 375
Score = 103 bits (259), Expect = 6e-28
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
+S++ TK++++NA +F GKW F TK+ PF L+ T++ V +M ++ +F M
Sbjct: 151 NSVNDQTKILVVNAAYFVGKWMKKFPESETKECPFRLNKTDTKPVQMMNMEATFCMGNID 210
Query: 86 GEDGFKMLELPY 97
K++ELP+
Sbjct: 211 -SINCKIIELPF 221
>1sek_A Serpin K; serine protease inhibitor, protease; 2.10A {Manduca
sexta} SCOP: e.1.1.1 PDB: 1k9o_I
Length = 378
Score = 103 bits (259), Expect = 6e-28
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
D+LD +T+ VL+NAI+FKG W F E T D F++ +++VP M K +
Sbjct: 156 DALDETTRSVLVNAIYFKGSWKDKFNKERTMDRDFHVSKDKTIKVPTMIGKKDVRYADVP 215
Query: 86 GEDGFKMLELPY 97
E KM+E+ Y
Sbjct: 216 -ELDAKMIEMSY 226
>1hle_A Horse leukocyte elastase inhibitor; hydrolase inhibitor(serine
proteinase); 1.95A {Equus caballus} SCOP: e.1.1.1
Length = 345
Score = 102 bits (257), Expect = 6e-28
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
+D TKLVL+NAI+FKG W F EAT+D PF L+ ++ V +M+ K F
Sbjct: 152 GMVDNMTKLVLVNAIYFKGNWQQKFMKEATRDAPFRLNKKDTKTVKMMYQKKKFPYN-YI 210
Query: 86 GEDGFKMLELPY 97
+ ++LELPY
Sbjct: 211 EDLKCRVLELPY 222
>1yxa_A Serine (OR cysteine) proteinase inhibitor, clade 3N; serpin,
antichymotrypsin, protease inhibitor, reactive centr
plasma, hydrolase inhibitor; 2.10A {Mus musculus}
Length = 398
Score = 103 bits (259), Expect = 7e-28
Identities = 28/72 (38%), Positives = 36/72 (50%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
LD T +VL+N I+FK KW VPF P T FY V VP+M ++D Y
Sbjct: 175 SDLDKRTLMVLVNYIYFKAKWKVPFDPLDTFKSEFYCGKRRPVIVPMMSMEDLTTPYFRD 234
Query: 86 GEDGFKMLELPY 97
E ++EL Y
Sbjct: 235 EELSCTVVELKY 246
>1as4_A Antichymotrypsin, ACT; serpin, serine protease inhibitor; 2.10A
{Homo sapiens} SCOP: e.1.1.1 PDB: 2ach_A* 4caa_A 3caa_A
Length = 341
Score = 101 bits (255), Expect = 1e-27
Identities = 27/72 (37%), Positives = 36/72 (50%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
LD+ T +VL+N I FK KW +PF P+ T FYL V VP+M + Y
Sbjct: 155 KDLDSQTMMVLVNYIFFKAKWEMPFDPQDTHQSRFYLSKKKWVMVPMMSLHHLTIPYFRD 214
Query: 86 GEDGFKMLELPY 97
E ++EL Y
Sbjct: 215 EELSCTVVELKY 226
>3f1s_A Protein Z-dependent protease inhibitor; PZ, ZPI, complex, serpin,
protease inhibitor, protease, GLYC secreted, serine
protease inhibitor, blood coagulation; HET: FLC NAG;
2.30A {Homo sapiens} PDB: 3h5c_A*
Length = 385
Score = 102 bits (257), Expect = 1e-27
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
D ++ TKL+L++ I FKGKW PF P T+ F+LD +++VP+M+ F +
Sbjct: 163 DEINPETKLILVDYILFKGKWLTPFDPVFTEVDTFHLDKYKTIKVPMMYGAGKFASTFDK 222
Query: 86 GEDGFKMLELPY 97
+L+LPY
Sbjct: 223 -NFRCHVLKLPY 233
>1mtp_A Serine proteinase inhibitor (serpin), chain A; structural genomics,
protease inhibitor; 1.50A {Thermobifida fusca} SCOP:
e.1.1.1
Length = 323
Score = 101 bits (254), Expect = 1e-27
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
++ + +L NA+ K +WT PF+ T++G F +VP M +
Sbjct: 146 GAVTPDLRAILTNALWAKARWTTPFEAHLTREGTFRTPR-GPKRVPFMHRTKTMPYAT-- 202
Query: 86 GEDGFKMLELPYG 98
G++M+ L
Sbjct: 203 -ARGWRMVTLHAH 214
>1uhg_A Ovalbumin, S-ovalbumin; allergen, egg white protein, serpin; HET:
SEP NAG; 1.90A {Gallus gallus} SCOP: e.1.1.1 PDB:
1ova_A* 1jti_A
Length = 385
Score = 102 bits (256), Expect = 2e-27
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
S+D+ T +VL+NAI FKG W FK E T+ PF + + S V +M+ F + A
Sbjct: 164 SSVDSQTAMVLVNAIVFKGLWEKAFKDEDTQAMPFRVTEQESKPVQMMYQIGLFRVASMA 223
Query: 86 GEDGFKMLELPY 97
+ K+LELP+
Sbjct: 224 -SEKMKILELPF 234
>2r9y_A Alpha-2-antiplasmin; inhibitory serpin, plasmin inhibitor, AC
phase, glycoprotein, protease inhibitor, secreted,
serine P inhibitor, sulfation; 2.65A {Mus musculus}
Length = 430
Score = 102 bits (257), Expect = 2e-27
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
L ST L+L+NAIHF G W F P T+ F+LD+ +V V +M +
Sbjct: 160 SELPDSTVLLLLNAIHFHGFWRTKFDPSLTQKDFFHLDERFTVSVDMMHAVSYPLRWFLL 219
Query: 86 GEDGFKMLELPYG 98
+ ++ P+
Sbjct: 220 EQPEIQVAHFPFK 232
>3f5n_A Neuroserpin; cleaved form, fenib, human, tissue PLAS activator,
hydrolase inhibitor; 3.15A {Homo sapiens}
Length = 407
Score = 102 bits (256), Expect = 2e-27
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYE-- 83
DA+T L LINA++FKG W F+PE T+ F DD + VQ+P+M+ + FY E
Sbjct: 167 RDFDAATYLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFS 226
Query: 84 ---EAGEDGFKMLELPY 97
+++LE+PY
Sbjct: 227 DGSNEAGGIYQVLEIPY 243
>2zv6_A Serpin B3; serine proteinase inhibitor, reactive site loop,
acetylation, alternative splicing, cytoplasm,
polymorphism, protease inhibitor; 2.70A {Homo sapiens}
Length = 401
Score = 102 bits (255), Expect = 2e-27
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
++ ++T LVL+NAI+FKG+W F E TK+ F+ + + +M SF+
Sbjct: 177 GNIGSNTTLVLVNAIYFKGQWEKKFNKEDTKEEKFWPNKNTYKSIQMMRQYTSFHFASLE 236
Query: 86 GEDGFKMLELPY 97
+ K+LE+PY
Sbjct: 237 -DVQAKVLEIPY 247
>1imv_A PEDF, pigment epithelium-derived factor; serpin, angiogenesis,
signaling protein; HET: NAG; 2.85A {Homo sapiens} SCOP:
e.1.1.1
Length = 398
Score = 101 bits (255), Expect = 2e-27
Identities = 20/72 (27%), Positives = 33/72 (45%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
+ ++L+ HFKG+W F T FYLD+ +V+VP+M + Y
Sbjct: 177 KEIPDEISILLLGVAHFKGQWVTKFDSRKTSLEDFYLDEERTVRVPMMSDPKAVLRYGLD 236
Query: 86 GEDGFKMLELPY 97
+ K+ +LP
Sbjct: 237 SDLSCKIAQLPL 248
>3f02_A Neuroserpin; cleaved form, fenib, human, disease MUT glycoprotein,
protease inhibitor, secreted, serine protease inhibitor,
hydrolase inhibitor; 1.80A {Homo sapiens} PDB: 3fgq_A
1jjo_C 1jjo_A
Length = 359
Score = 101 bits (254), Expect = 3e-27
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYE-- 83
DA+T L LINA++FKG W F+PE T+ F DD + VQ+P+M+ + FY E
Sbjct: 167 RDFDAATYLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFS 226
Query: 84 ---EAGEDGFKMLELPY 97
+++LE+PY
Sbjct: 227 DGSNEAGGIYQVLEIPY 243
>1qmn_A AACT, alpha-1-antichymotrypsin; serpin, serine proteinase
inhibitor, partial loop insertion, loop-sheet
polymerization, emphysema, disease mutation; 2.27A {Homo
sapiens} SCOP: e.1.1.1 PDB: 3dlw_A
Length = 401
Score = 101 bits (255), Expect = 3e-27
Identities = 27/72 (37%), Positives = 36/72 (50%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
LD+ T +VL+N I FK KW +PF P+ T FYL V VP+M + Y
Sbjct: 175 KDLDSQTMMVLVNYIFFKAKWEMPFDPQDTHQSRFYLSKKKWVMVPMMSLHHLTIPYFRD 234
Query: 86 GEDGFKMLELPY 97
E ++EL Y
Sbjct: 235 EELSCTVVELKY 246
>4au2_A HSP47, serpin peptidase inhibitor, clade H (heat shock P 47),
member 1, (collagen binding...; chaperone-peptide
complex; 2.30A {Canis lupus familiaris} PDB: 4au3_A
4au4_A 4awr_A 4au3_B
Length = 392
Score = 101 bits (254), Expect = 4e-27
Identities = 14/72 (19%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
++ + +L+NA+ FK W F + + F + + +V V +M + Y++
Sbjct: 156 KDVERTDGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSYTVGVTMMHRTGLYNYYDDE 215
Query: 86 GEDGFKMLELPY 97
++ +++E+P
Sbjct: 216 -KEKLQIVEMPL 226
>1sng_A COG4826: serine protease inhibitor; serine protease inhibitor
(serpin), native state., hydrolase inhibitor; 1.76A
{Thermobifida fusca} SCOP: e.1.1.1
Length = 370
Score = 100 bits (252), Expect = 4e-27
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
++ + +L NA+ K +WT PF+ T+ G F +VP M +
Sbjct: 150 GAVTPDLRAILTNALWAKARWTTPFEAHLTRAGTFRTPR-GPKRVPFMHRTKTMPYAT-- 206
Query: 86 GEDGFKMLELPYG 98
G++M+ L
Sbjct: 207 -ARGWRMVTLHAH 218
>2oay_A C1-inhibitor, plasma protease C1 inhibitor, C1 INH, C1INH; latent
serpin, RCL insertion, immune system,hydrolase inhibi;
HET: NAG; 2.35A {Homo sapiens}
Length = 390
Score = 101 bits (253), Expect = 5e-27
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
DSL + T+LVL+NAI+ KW F P+ T+ PF+ ++ ++VP+M K +
Sbjct: 169 DSLPSDTRLVLLNAIYLSAKWKTTFDPKKTRMEPFHFKNS-VIKVPMMNSKKYPVAHFID 227
Query: 86 GEDGFKMLELPYG 98
K+ +L
Sbjct: 228 QTLKAKVGQLQLS 240
>1jmo_A HC-II, heparin cofactor II, HLS2, serin; serpin, thrombin,
protease, inhibition, inhibitor, blood CLO; HET: TYS NDG
NAG; 2.20A {Homo sapiens} SCOP: e.1.1.1 PDB: 1jmj_A*
Length = 480
Score = 101 bits (254), Expect = 7e-27
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
+++D +T+++++N I+FKG W F E T + F L++ V+V +M K +F +
Sbjct: 260 ENIDPATQMMILNCIYFKGSWVNKFPVEMTHNHNFRLNEREVVKVSMMQTKGNFLAANDQ 319
Query: 86 GEDGFKMLELPY 97
E +L+L Y
Sbjct: 320 -ELDCDILQLEY 330
>3b9f_I Protein C inhibitor; michaelis complex, acute phase, blood
coagulation, cleavage of basic residues, disease
mutation; HET: NAG FUC SGN IDS; 1.60A {Homo sapiens}
PDB: 2ol2_A*
Length = 395
Score = 100 bits (252), Expect = 7e-27
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
+LD++ ++++N I FK KW F + T++ FY+ V+VP+M +D ++ +
Sbjct: 178 KNLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLDR 237
Query: 86 GEDGFKMLELPY 97
+++ +PY
Sbjct: 238 -NLSCRVVGVPY 248
>3dy0_A N-terminus plasma serine protease inhibitor; serpin, blood
clotting, hydrolase inhibitor; HET: IDS SGN; 1.55A {Homo
sapiens} PDB: 1lq8_A* 2hi9_A*
Length = 336
Score = 99 bits (250), Expect = 7e-27
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
+LD++ ++++N I FK KW F + T++ FY+ V+VP+M +D ++ +
Sbjct: 153 KNLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLDR 212
Query: 86 GEDGFKMLELPY 97
+++ +PY
Sbjct: 213 -NLSCRVVGVPY 223
>2vdx_A Corticosteroid-binding globulin; transport protein, cortisol
binding globulin, glycoprotein, lipid-binding, disease
mutation, CBG, SERP cleaved; 1.84A {Homo sapiens} PDB:
2vdy_A*
Length = 373
Score = 100 bits (251), Expect = 9e-27
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
LD+ LVL+N I FKG WT PF +T++ FY+D+T V+VP+M + ++
Sbjct: 155 SGLDSPAILVLVNYIFFKGTWTQPFDLASTREENFYVDETTVVKVPMMLQSSTISYLHDS 214
Query: 86 GEDGFKMLELPY 97
E +++++ Y
Sbjct: 215 -ELPCQLVQMNY 225
>3ndd_A Alpha-1-antitrypsin; serpin, hydrolase inhibitor; 1.50A {Homo
sapiens} PDB: 3ndf_A 7api_A* 8api_A* 9api_A* 1d5s_A
1ezx_A 3t1p_A 2d26_A 1qmb_A
Length = 343
Score = 99.6 bits (249), Expect = 1e-26
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
LD T L+N I FKGKW PF+ + T++ F++D +V+VP+M F +
Sbjct: 159 KELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGMFNIQHAK 218
Query: 86 GEDGFKMLELPY 97
+ +L + Y
Sbjct: 219 -KLSSWVLLMKY 229
>3ne4_A Alpha-1-antitrypsin; serpin, LUNG disease, liver disease,
polymerisation, hydrolase inhibitor; 1.81A {Homo
sapiens} PDB: 1qlp_A 2qug_A 3cwl_A 3cwm_A* 1psi_A 3drm_A
1kct_A 3dru_A 1hp7_A 1iz2_A* 1oph_A 1oo8_A 1atu_A 1d5s_B
1qmb_B
Length = 424
Score = 99.3 bits (248), Expect = 3e-26
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
LD T L+N I FKGKW PF+ + T++ F++D +V+VP+M F +
Sbjct: 204 KELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGMFNIQHCK 263
Query: 86 GEDGFKMLELPY 97
+ +L + Y
Sbjct: 264 -KLSSWVLLMKY 274
>2v95_A Corticosteroid-binding globulin; transport protein, CBG, RCL,
serpin, secreted, transport, glycoprotein,
lipid-binding, glucocorticoids; HET: HCY; 1.93A {Rattus
norvegicus}
Length = 371
Score = 98.4 bits (246), Expect = 4e-26
Identities = 21/72 (29%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
LD+ +L+N I +G W +PF PE T++ FY+++T++V+VP+M S + ++
Sbjct: 154 SDLDSPASFILVNYIFLRGIWELPFSPENTREEDFYVNETSTVKVPMMVQSGSIGYFRDS 213
Query: 86 GEDGFKMLELPY 97
+++++ Y
Sbjct: 214 -VFPCQLIQMDY 224
>4dy0_A GLIA-derived nexin; serpin, protease inhibitor, thrombin, cell
surface, hydrolas inhibitor; HET: IDS SGN; 2.35A {Homo
sapiens} PDB: 4dy7_C
Length = 379
Score = 98.1 bits (245), Expect = 5e-26
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 26 DSLDAS-TKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYE- 83
D +D T+LVL+NA++FKG W F+PE TK F D S QVP++ F
Sbjct: 153 DLIDGVLTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGST 212
Query: 84 -EAGEDGFKMLELPY 97
+ + +ELPY
Sbjct: 213 SAPNDLWYNFIELPY 227
>3pzf_A Serpin 2; protease inhibitor, melanization, hydrolase inhibito;
1.75A {Anopheles gambiae}
Length = 397
Score = 98.5 bits (246), Expect = 5e-26
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 24 FTDSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYE 83
T + L+N I+FKG WT PF A PFY M FY
Sbjct: 167 VTPDSLEGAVITLVNVIYFKGLWTYPFPEVANNVKPFYGTRGKPTNAQYMEQNGQFYYDN 226
Query: 84 EAGEDGFKMLELPY 97
A + G ++L LPY
Sbjct: 227 SA-DLGAQILRLPY 239
>2xn6_A Thyroxine-binding globulin; transport, cleaved protein; HET: F6Y
T44; 1.29A {Homo sapiens} PDB: 2xn7_A* 2xn5_A* 2riv_A
2xn3_A* 2riw_A*
Length = 350
Score = 95.4 bits (238), Expect = 4e-25
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKD-GPFYLDDTNSVQVPLMFVKDSFYMYEE 84
L +T +VL+N IHFK +W PF P T+D F +D T +VQVP+M D +Y +
Sbjct: 159 QDLKPNTIMVLVNYIHFKAQWANPFDPSKTEDSSSFLIDKTTTVQVPMMHQMDQYYHLVD 218
Query: 85 AGEDGFKMLELPY 97
E +L++ Y
Sbjct: 219 M-ELNCTVLQMDY 230
>2ceo_A Thyroxine-binding globulin; transport, serpin, hormone trans
thyroxine, disease mutation, glycoprotein; HET: T44;
2.80A {Homo sapiens}
Length = 379
Score = 95.8 bits (239), Expect = 5e-25
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKD-GPFYLDDTNSVQVPLMFVKDSFYMYEE 84
L +T +VL+N IHFK +W PF P T+D F +D T +VQVP+M + +Y +
Sbjct: 154 QDLKPNTIMVLVNYIHFKAQWANPFDPSKTEDSSSFLIDKTTTVQVPMMHQMEQYYHLVD 213
Query: 85 AGEDGFKMLELPY 97
E +L++ Y
Sbjct: 214 M-ELNCTVLQMDY 225
>2wxy_C Angiotensinogen, serpin A8; glycoprotein, hypertension,
vasoconstrictor, renin, serpins, vasoactive, hormone;
2.10A {Mus musculus} PDB: 2wxx_A 2wy0_C 2wxz_A 2wxz_C
2wy1_A
Length = 453
Score = 93.6 bits (233), Expect = 4e-24
Identities = 15/73 (20%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
+ + + L+ +HF+G + + F++D++ SV VP++ +F + +A
Sbjct: 235 EGVSTDSTLLFNTYVHFQGTMRGFSQLPGVHE--FWVDNSISVSVPMISGTGNFQHWSDA 292
Query: 86 GEDGFKMLELPYG 98
++ F + +P G
Sbjct: 293 -QNNFSVTCVPLG 304
>2wxw_A Angiotensinogen, serpin A8; glycoprotein, hypertension,
vasoconstrictor, renin, serpins, vasoactive, hormone;
3.30A {Homo sapiens} PDB: 2x0b_B
Length = 453
Score = 92.1 bits (229), Expect = 1e-23
Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 26 DSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEA 85
+ L +HF+GK + F++D++ SV VP++ +F + +
Sbjct: 236 MGASVDSTLAFNTYVHFQGKM--KGFSLLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDI 293
Query: 86 GEDGFKMLELPYG 98
+D F + ++P+
Sbjct: 294 -QDNFSVTQVPFT 305
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 33.7 bits (76), Expect = 0.007
Identities = 22/118 (18%), Positives = 37/118 (31%), Gaps = 52/118 (44%)
Query: 11 QHIGY---------LMDVFPVFFTDS--LDASTKLVLINAIHFKGKWTVP---------- 49
HIG+ M +F + F D L+ K+ H W
Sbjct: 475 SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQ--KI-----RHDSTAWNASGSILNTLQQL 527
Query: 50 --FKPEATKDGPFY---LDD-----------------TNSVQVPLMFVKDSFYMYEEA 85
+KP + P Y ++ T+ +++ LM +D +EEA
Sbjct: 528 KFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMA-EDEAI-FEEA 583
>2g8l_A 287AA long hypothetical protein; structural genomics, joint center
for structural genomics, J protein structure initiative,
PSI-2; 2.04A {Pyrococcus horikoshii} SCOP: e.50.1.1
Length = 299
Score = 30.3 bits (68), Expect = 0.10
Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 9/97 (9%)
Query: 5 FALIKQQHIGYLMDVFPVF---FTDSLDASTKLVLI-NAIHFKGKWTVPFKPEAT----K 56
F K + V + + + KL +I N I F P E
Sbjct: 83 FIEYKLKSEEMARKVADIIKRKLKLDFELAVKLAIIGNVIDF-SVGFSPEDLEEEVEKML 141
Query: 57 DGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDGFKML 93
Y+DD+ + + ++ Y+ + GE F +
Sbjct: 142 KDKLYIDDSKELFEEVKRAENILYITDNVGEHYFDAI 178
>3hft_A WBMS, polysaccharide deacetylase involved in O-AN biosynthesis;
structural genomics, joint center for structural
genomics; HET: MSE; 1.90A {Bordetella bronchiseptica}
Length = 257
Score = 28.6 bits (63), Expect = 0.30
Identities = 17/97 (17%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Query: 9 KQQHIGYLMDVFP---VFFTDSLDASTKLVLI---NAIHFKGKWTVPFKPEATKDGPFYL 62
Q+ + +++ P + SL +T ++ + + + VP+ P+
Sbjct: 107 VQEILDRTLELAPGCVSVRSHSLVQATSILNMFGERRLRYDCNILVPWDAGIVLQ-PWRH 165
Query: 63 DDTNSVQVPLMFVKDSFYMYEEAGEDGFKMLELPYGI 99
+ V+VP ++ D +Y+ + F P GI
Sbjct: 166 WTGDMVRVPYLWEDDVACLYDWEFDSTFDYWYQPDGI 202
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.141 0.429
Gapped
Lambda K H
0.267 0.0755 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,631,204
Number of extensions: 83982
Number of successful extensions: 183
Number of sequences better than 10.0: 1
Number of HSP's gapped: 140
Number of HSP's successfully gapped: 47
Length of query: 108
Length of database: 6,701,793
Length adjustment: 72
Effective length of query: 36
Effective length of database: 4,691,481
Effective search space: 168893316
Effective search space used: 168893316
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.4 bits)