Query         psy2651
Match_columns 342
No_of_seqs    224 out of 1402
Neff          7.0 
Searched_HMMs 29240
Date          Fri Aug 16 21:43:35 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy2651.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2651hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3f02_A Neuroserpin; cleaved fo 100.0 2.2E-54 7.5E-59  421.3  13.9  230   80-340    18-258 (359)
  2 1hle_A Horse leukocyte elastas 100.0 1.1E-53 3.7E-58  414.2  15.1  225   83-340     7-237 (345)
  3 3ndd_A Alpha-1-antitrypsin; se 100.0 1.6E-53 5.5E-58  412.8  16.0  231   80-341    10-244 (343)
  4 3dy0_A N-terminus plasma serin 100.0   2E-53 6.9E-58  411.1  16.4  223   88-341    11-238 (336)
  5 3f5n_A Neuroserpin; cleaved fo 100.0   2E-53 6.7E-58  420.9  16.2  230   80-340    18-258 (407)
  6 3ne4_A Alpha-1-antitrypsin; se 100.0 3.8E-53 1.3E-57  420.6  17.1  232   79-341    54-289 (424)
  7 2h4p_A MENT, heterochromatin-a 100.0 4.2E-53 1.4E-57  417.0  16.0  239   80-340    28-289 (394)
  8 3nda_A Serpin-2; vaccination t 100.0 3.7E-53 1.3E-57  415.2  15.4  229   82-340     8-241 (377)
  9 4ga7_A Leukocyte elastase inhi 100.0 3.6E-53 1.2E-57  416.8  15.3  221   88-340    20-246 (389)
 10 1uhg_A Ovalbumin, S-ovalbumin; 100.0   6E-53   2E-57  414.6  15.0  228   82-340     4-249 (385)
 11 2xn6_A Thyroxine-binding globu 100.0 7.2E-53 2.5E-57  409.3  15.1  229   81-341    11-245 (350)
 12 3ozq_A Serpin48; SPE, hydrolas 100.0 1.1E-52 3.7E-57  411.7  15.9  228   80-340    10-240 (376)
 13 4au2_A HSP47, serpin peptidase 100.0 1.4E-52 4.7E-57  413.0  16.6  229   80-341     8-242 (392)
 14 2zv6_A Serpin B3; serine prote 100.0 1.1E-52 3.8E-57  414.9  15.3  229   80-340    14-262 (401)
 15 1as4_A Antichymotrypsin, ACT;  100.0 1.2E-52   4E-57  406.4  15.2  231   80-341     6-241 (341)
 16 3sto_A Serine protease inhibit 100.0 2.3E-52 7.9E-57  413.2  16.4  230   81-340    15-263 (406)
 17 2h4r_A MENT, heterochromatin-a 100.0 2.4E-52 8.2E-57  414.2  16.5  237   82-340    10-269 (415)
 18 1lj5_A Plasminogen activator i 100.0 3.7E-52 1.3E-56  408.3  16.4  227   82-340     9-244 (379)
 19 2ceo_A Thyroxine-binding globu 100.0 3.4E-52 1.2E-56  408.5  16.0  229   81-341     6-240 (379)
 20 2arr_A Plasminogen activator i 100.0 1.5E-52 5.1E-57  411.4  13.3  228   81-340     4-239 (382)
 21 3b9f_I Protein C inhibitor; mi 100.0 5.7E-52 1.9E-56  409.1  17.4  230   80-341    28-263 (395)
 22 4afx_A Protein Z dependent pro 100.0   3E-52   1E-56  409.8  15.4  226   80-340    53-285 (387)
 23 2vdx_A Corticosteroid-binding  100.0 3.6E-52 1.2E-56  407.5  15.6  230   80-341     6-240 (373)
 24 1sek_A Serpin K; serine protea 100.0 1.6E-52 5.6E-57  410.7  12.5  226   82-340    12-241 (378)
 25 4dy0_A GLIA-derived nexin; ser 100.0 3.8E-52 1.3E-56  408.2  13.9  225   83-341    10-243 (379)
 26 1wz9_A Maspin precursor; serpi 100.0 2.1E-52 7.3E-57  409.5  12.1  222   83-337     6-233 (375)
 27 1yxa_A Serine (OR cysteine) pr 100.0 8.7E-52   3E-56  408.1  16.4  230   80-341    26-261 (398)
 28 3f1s_A Protein Z-dependent pro 100.0 9.3E-52 3.2E-56  406.2  14.1  227   80-340    15-247 (385)
 29 4ajt_A Protein Z-dependent pro 100.0 1.5E-51 5.2E-56  409.3  14.4  226   80-339    57-288 (427)
 30 3pzf_A Serpin 2; protease inhi 100.0 4.2E-51 1.4E-55  403.0  16.2  225   83-340    20-254 (397)
 31 1qmn_A AACT, alpha-1-antichymo 100.0 2.6E-51 8.9E-56  405.1  13.9  231   80-341    26-261 (401)
 32 3kcg_I Antithrombin-III, ATIII 100.0 1.6E-51 5.3E-56  410.0  11.0  231   81-341    51-290 (432)
 33 1imv_A PEDF, pigment epitheliu 100.0 9.8E-51 3.4E-55  400.6  15.2  227   80-341    33-265 (398)
 34 2v95_A Corticosteroid-binding  100.0 9.1E-51 3.1E-55  397.4  14.5  227   80-341     8-239 (371)
 35 3le2_A Serpin-ZX; apoplast, gl 100.0 6.9E-51 2.4E-55  401.0  13.2  220   88-341    14-247 (393)
 36 1mtp_A Serine proteinase inhib 100.0   3E-50   1E-54  386.9  15.1  218   80-338     5-225 (323)
 37 1jmo_A HC-II, heparin cofactor 100.0 1.2E-49   4E-54  400.5  13.9  228   81-340   107-344 (480)
 38 1sng_A COG4826: serine proteas 100.0 3.9E-49 1.3E-53  385.7  15.3  218   80-338     9-229 (370)
 39 2wxy_C Angiotensinogen, serpin 100.0 4.2E-49 1.4E-53  394.7  14.5  234   80-340    72-317 (453)
 40 2pef_A Serine protease inhibit 100.0 3.4E-49 1.2E-53  386.4  13.1  221   81-341     9-233 (373)
 41 2wxw_A Angiotensinogen, serpin 100.0 5.2E-49 1.8E-53  394.0  12.8  234   80-340    73-318 (453)
 42 2r9y_A Alpha-2-antiplasmin; in 100.0 3.2E-48 1.1E-52  385.7  15.2  224   81-340    21-245 (430)
 43 1f0c_A ICE inhibitor; apoptosi 100.0 1.7E-47 5.7E-52  365.1  14.8  194  113-341     6-205 (305)
 44 2oay_A C1-inhibitor, plasma pr 100.0 2.2E-47 7.4E-52  375.8  13.9  218   81-340    32-253 (390)
 45 1m93_B Serine proteinase inhib 100.0 1.4E-35 4.9E-40  274.4  10.9  144  187-341     3-150 (245)
 46 1m93_A Serine proteinase inhib  99.4 1.4E-13 4.9E-18   97.9   3.1   46  113-158     6-52  (55)
 47 1je8_A Nitrate/nitrite respons  23.7      53  0.0018   23.6   2.8   35  140-186    34-68  (82)
 48 3ulq_B Transcriptional regulat  23.5      70  0.0024   23.5   3.5   34  141-186    43-76  (90)

No 1  
>3f02_A Neuroserpin; cleaved form, fenib, human, disease MUT glycoprotein, protease inhibitor, secreted, serine protease inhibitor, hydrolase inhibitor; 1.80A {Homo sapiens} PDB: 3fgq_A 1jjo_C 1jjo_A
Probab=100.00  E-value=2.2e-54  Score=421.35  Aligned_cols=230  Identities=30%  Similarity=0.531  Sum_probs=205.3

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      .++++.+ +||++||+                 ++.+. +++|+||||+||+.+|+|+++||+|+|++||.++||++...
T Consensus        18 ~l~~~~~-~Fa~~L~~-----------------~l~~~~~~~Niv~SP~Si~~aLaml~~GA~G~T~~ql~~~L~~~~~~   79 (359)
T 3f02_A           18 FPEEAIA-DLSVNMYN-----------------RLRATGEDENILFSPLSIALAMGMMELGAQGSTQKEIRHSMGYDSLK   79 (359)
T ss_dssp             ---CHHH-HHHHHHHH-----------------HHHHHSTTCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHTCCC--
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHhhcCCCCCEEEcHHHHHHHHHHHHhhcCChHHHHHHHHhCCCCCC
Confidence            4556667 99999999                 88776 78999999999999999999999999999999999998654


Q ss_pred             cchhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhch
Q psy2651         159 TLLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMND  235 (342)
Q Consensus       159 ~~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~  235 (342)
                      ..+         ++..|+.++..+.+.+   .+.+||+||+++++++.++|++.++++|+++++.+||.+++.+++.||+
T Consensus        80 ~~~---------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN~  150 (359)
T 3f02_A           80 NGE---------EFSFLKEFSNMVTAKESQYVMKIANSLFVQNGFHVNEEFLQMMKKYFNAAVNHVDFSQNVAVANYINK  150 (359)
T ss_dssp             --C---------HHHHHHCC----------CEEEEEEEEEEETTCCCCHHHHHHHHHHHCCEEEEECTTSHHHHHHHHHH
T ss_pred             HHH---------HHHHHHHHHHHHhcCCCCcEEEEEEEEEEeCCCccchHHHHHHHHHhcCceEEcCCCCHHHHHHHHHH
Confidence            334         8888998888776433   8999999999999999999999999999999999999988889999999


Q ss_pred             hhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCC
Q psy2651         236 WVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDG  315 (342)
Q Consensus       236 WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~  315 (342)
                      ||+++|+|+|++++++++++++|+++|+||+||||.|+++|++.+|++++|+..+|++++||||++.+. |+|+++++++
T Consensus       151 WV~~~T~gkI~~ll~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~v~V~mM~~~~~-~~y~~~~~l~  229 (359)
T 3f02_A          151 WVENNTNNLVKDLVSPRDFDAATYLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGE-FYYGEFSDGS  229 (359)
T ss_dssp             HHHHTTTTCSCCSSCGGGCSTTEEEEEEEEEEEEEEBSSCCCGGGCEEEEEECTTSCEEEEEEEEEEEE-EEEEEEECCC
T ss_pred             HHHhhhCCcccccCCcccCCCCceEEEEeHHHHhHHhhccCCcccceeeeeEecCCcEEEccceEeece-EeEEEccCcC
Confidence            999999999999999999999999999999999999999999999999999999999999999999998 9999999998


Q ss_pred             e------EEEEEeC-CCcEEEEEeecCCCCCC
Q psy2651         316 F------KMLELPY-GVSISFIIKSQVVPEMG  340 (342)
Q Consensus       316 ~------~vLELPY-~~~~SMlI~~~ILP~~g  340 (342)
                      +      +|||||| ++++||+|   |||+++
T Consensus       230 a~~~~~~~vleLPY~~~~~sm~i---iLP~~~  258 (359)
T 3f02_A          230 NEAGGIYQVLEIPYEGDEISMML---VLSRQE  258 (359)
T ss_dssp             ---CCEEEEEEEEBTTSSEEEEE---EECCTT
T ss_pred             cccccccEEEEeEcCCCcEEEEE---EEcCCC
Confidence            8      9999999 99999999   899986


No 2  
>1hle_A Horse leukocyte elastase inhibitor; hydrolase inhibitor(serine proteinase); 1.95A {Equus caballus} SCOP: e.1.1.1
Probab=100.00  E-value=1.1e-53  Score=414.25  Aligned_cols=225  Identities=33%  Similarity=0.566  Sum_probs=211.0

Q ss_pred             ccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcccch
Q psy2651          83 SILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLL  161 (342)
Q Consensus        83 ~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~~~  161 (342)
                      ++.+ +||++||+                 ++.+. +++|+||||+||+.+|+|+++||+|+|++||.++||++...  +
T Consensus         7 ~~~~-~Fa~~l~~-----------------~l~~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~--~   66 (345)
T 1hle_A            7 TANT-HFAVDLFR-----------------ALNESDPTGNIFISPLSISSALAMIFLGTRGNTAAQVSKALYFDTVE--D   66 (345)
T ss_dssp             HHHH-HHHHHHHH-----------------HHHHHCSSSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHHTGGGST--T
T ss_pred             HHHH-HHHHHHHH-----------------HHhhcCCCCCEEEchHHHHHHHHHHHHhccChHHHHHHHHhCCCCHH--H
Confidence            4445 99999999                 88776 78999999999999999999999999999999999997532  4


Q ss_pred             hcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecC-CCcHHHHHhhchhh
Q psy2651         162 KDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDF-SQPPAAAKEMNDWV  237 (342)
Q Consensus       162 ~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF-~~~~~a~~~IN~WV  237 (342)
                               ++..|+.++..+...+   .+.+||+||+++++++.++|.+.++++|+++++.+|| .+++.+++.||+||
T Consensus        67 ---------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~WV  137 (345)
T 1hle_A           67 ---------IHSRFQSLNADINKPGAPYILKLANRLYGEKTYNFLADFLASTQKMYGAELASVDFQQAPEDARKEINEWV  137 (345)
T ss_dssp             ---------HHHHHHHHHHHHTCSSCSSEEEEEEEEEEETTCCCCHHHHHHHHHHHCCEEEEECTTTCHHHHHHHHHHHH
T ss_pred             ---------HHHHHHHHHHHHhCCCCCcEEEEEEEeeecCCCchhHHHHHHHHHHhCCeEEEecCCCCHHHHHHHHHHHH
Confidence                     8899999999987643   8999999999999999999999999999999999999 56777899999999


Q ss_pred             hcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCCeE
Q psy2651         238 SNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDGFK  317 (342)
Q Consensus       238 ~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~~~  317 (342)
                      +++|+|+|++++++++++++|+++|+||+||||.|+++|++..|++++||..+|+.++||||++.+. |+|+++++++++
T Consensus       138 ~~~T~gkI~~ll~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~-~~~~~~~~~~~~  216 (345)
T 1hle_A          138 KGQTEGKIPELLVKGMVDNMTKLVLVNAIYFKGNWQQKFMKEATRDAPFRLNKKDTKTVKMMYQKKK-FPYNYIEDLKCR  216 (345)
T ss_dssp             HHHTTTSSSCSSCTTSSCTTEEEEEEEEEEEEEEBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEE-EEEEEEGGGTEE
T ss_pred             HHHhcCchhhhcCCcCCCCcceEEEEEeeEecccccCCCCcccCcceeEEeCCCeEEEEEEEEeece-EeeEEeCCCCeE
Confidence            9999999999999999999999999999999999999999999999999999999999999999998 999999999999


Q ss_pred             EEEEeC-CCcEEEEEeecCCCCCC
Q psy2651         318 MLELPY-GVSISFIIKSQVVPEMG  340 (342)
Q Consensus       318 vLELPY-~~~~SMlI~~~ILP~~g  340 (342)
                      |||||| ++++||+|   |||+++
T Consensus       217 vleLPy~~~~~sm~i---iLP~~~  237 (345)
T 1hle_A          217 VLELPYQGKELSMII---LLPDDI  237 (345)
T ss_dssp             EEEEEBTTSSEEEEE---EEESSC
T ss_pred             EEEecCCCCeEEEEE---EecCCC
Confidence            999999 99999999   899986


No 3  
>3ndd_A Alpha-1-antitrypsin; serpin, hydrolase inhibitor; 1.50A {Homo sapiens} PDB: 3ndf_A 7api_A* 8api_A* 9api_A* 1d5s_A 1ezx_A 3t1p_A 2d26_A 1qmb_A
Probab=100.00  E-value=1.6e-53  Score=412.78  Aligned_cols=231  Identities=26%  Similarity=0.463  Sum_probs=211.8

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      .++.+.+ +||++||+                 ++++. +++|+||||+||+.+|+|+++||+|+|++||.++||++..+
T Consensus        10 ~l~~~~~-~Fa~~l~~-----------------~l~~~~~~~Ni~~SP~Si~~aLaml~~GA~g~T~~ql~~~L~~~~~~   71 (343)
T 3ndd_A           10 KITPNLA-EFAFSLYR-----------------QLAHQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTE   71 (343)
T ss_dssp             TTHHHHH-HHHHHHHH-----------------HHHHHCTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTTT
T ss_pred             HHHHHHh-HHHHHHHH-----------------HHhhcCCCCCEEEChHHHHHHHHHHHhhccchHHHHHHHHhCCCCCC
Confidence            4555666 99999999                 88776 78899999999999999999999999999999999998643


Q ss_pred             cchhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhch
Q psy2651         159 TLLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMND  235 (342)
Q Consensus       159 ~~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~  235 (342)
                      .++.+       ++..|+.++..+.+++   .+.+||+||+++++++.++|++.++++|+++++.+||.+++.+++.||+
T Consensus        72 ~~~~~-------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN~  144 (343)
T 3ndd_A           72 IPEAQ-------IHEGFQELLRTLNQPDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQIND  144 (343)
T ss_dssp             SCHHH-------HHHHHHHHHHHHTSCCTTCEEEEEEEEEEETTCCCCHHHHHHHHHHHCEEEEEECTTSHHHHHHHHHH
T ss_pred             CCHHH-------HHHHHHHHHHHHhCCCCCceEEeehhhHhhCCCChhHHHHHHHHHHhccccEeecCCCHHHHHHHHHH
Confidence            22222       8899999999887643   8999999999999999999999999999999999999988889999999


Q ss_pred             hhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCC
Q psy2651         236 WVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDG  315 (342)
Q Consensus       236 WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~  315 (342)
                      ||+++|+|+|+++++  +++++|+++|+||+||||.|+++|++.+|++++||..+|++++||||++.+. |+|+++++++
T Consensus       145 wV~~~T~g~I~~ll~--~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~-~~~~~~~~l~  221 (343)
T 3ndd_A          145 YVEKGTQGKIVDLVK--ELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGM-FNIQHAKKLS  221 (343)
T ss_dssp             HHHHHTTTSSCSCCS--CCCTTCCEEEEEEEEEEEEBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEE-EEEEEEGGGT
T ss_pred             HHHHhhcCchhhhhh--cCCCCceEEEEeHHHHhHHHhcccCCccccCcceecCCCcEEEEEEEEEEee-EEEEEeccCC
Confidence            999999999999997  7999999999999999999999999999999999999999999999999998 9999999999


Q ss_pred             eEEEEEeCCCcEEEEEeecCCCCCCC
Q psy2651         316 FKMLELPYGVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       316 ~~vLELPY~~~~SMlI~~~ILP~~g~  341 (342)
                      ++||||||.+++||+|   |||++|.
T Consensus       222 ~~vleLPY~~~~sm~i---iLP~~~~  244 (343)
T 3ndd_A          222 SWVLLMKYLGNATAIF---FLPDEGK  244 (343)
T ss_dssp             EEEEEEEBSSSEEEEE---EEECTTC
T ss_pred             eEEEEEecCCCeEEEE---EEeCccC
Confidence            9999999933589999   8999865


No 4  
>3dy0_A N-terminus plasma serine protease inhibitor; serpin, blood clotting, hydrolase inhibitor; HET: IDS SGN; 1.55A {Homo sapiens} PDB: 1lq8_A* 2hi9_A*
Probab=100.00  E-value=2e-53  Score=411.10  Aligned_cols=223  Identities=26%  Similarity=0.532  Sum_probs=207.6

Q ss_pred             cccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcccchhcccc
Q psy2651          88 RFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKG  166 (342)
Q Consensus        88 ~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~~~~~~~~  166 (342)
                      +||++||+                 +++.. +++|+||||+||+.+|+|+++||+|+|++||.++||++.....+.+   
T Consensus        11 ~Fa~~l~~-----------------~l~~~~~~~Ni~~SP~Si~~aLaml~~GA~g~T~~ql~~~L~~~~~~~~~~~---   70 (336)
T 3dy0_A           11 DFTFDLYR-----------------ALASAAPSQNIFFSPVSISMSLAMLSLGAGSSTKMQILEGLGLNLQKSSEKE---   70 (336)
T ss_dssp             CHHHHHHH-----------------HHHHHSTTSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHTTCCSCHHHHHH---
T ss_pred             HHHHHHHH-----------------HHhhhCCCCCEEEchHHHHHHHHHHHhHCcHHHHHHHHHHhCCCCCcCCHHH---
Confidence            99999999                 88876 7899999999999999999999999999999999999875322212   


Q ss_pred             hhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhchhhhcccCC
Q psy2651         167 IIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMNDWVSNHTND  243 (342)
Q Consensus       167 ~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~WV~~~T~g  243 (342)
                          ++..|+.++..+...+   .+.+||+||+++++++.++|++.++++|+++++.+||.+++.+++.||+||+++|+|
T Consensus        71 ----~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN~wV~~~T~g  146 (336)
T 3dy0_A           71 ----LHRGFQQLLQELNQPRDGFQLSLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRDSAGAMKQINDYVAKQTKG  146 (336)
T ss_dssp             ----HHHHHHHHHHHTTSCCSSSEEEEEEEEEECTTCCBCHHHHHHHHHHHCCEEEECCTTSHHHHHHHHHHHHHHHTTT
T ss_pred             ----HHHHHHHHHHHHhCCCCCcEEEEeehhhhCCCCCccHHHHHHHHHHhCCeeEEECCCChHHHHHHHHHHHHHhhcC
Confidence                8899999999887643   899999999999999999999999999999999999998888999999999999999


Q ss_pred             ccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCCeEEEEEeC
Q psy2651         244 KIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDGFKMLELPY  323 (342)
Q Consensus       244 ~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~~~vLELPY  323 (342)
                      +|+++++  +++++|+++|+||+||||.|+++|++.+|++++||..+|++++||||++.+. |+|+++++++++||||||
T Consensus       147 ~I~~l~~--~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~-f~~~~~~~l~~~vleLPy  223 (336)
T 3dy0_A          147 KIVDLLK--NLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQ-YHYLLDRNLSCRVVGVPY  223 (336)
T ss_dssp             SSCCCCC--SCCSCEEEEEEEEEEEEEEBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEE-EEEEEETTTTEEEEEEEB
T ss_pred             cHhHhhc--CCCCCCeEEeEehheeeeeccCCCCcccccccceeccCCcEEEEeeEEEEeE-EEEEEecCCCeEEEEeec
Confidence            9999998  7999999999999999999999999999999999999999999999999998 999999999999999999


Q ss_pred             -CCcEEEEEeecCCCCCCC
Q psy2651         324 -GVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       324 -~~~~SMlI~~~ILP~~g~  341 (342)
                       | ++||+|   |||+++.
T Consensus       224 ~~-~~sm~i---iLP~~~~  238 (336)
T 3dy0_A          224 QG-NATALF---ILPSEGK  238 (336)
T ss_dssp             SS-SCEEEE---EEECTTC
T ss_pred             CC-CeEEEE---EecCCCC
Confidence             6 589999   8999864


No 5  
>3f5n_A Neuroserpin; cleaved form, fenib, human, tissue PLAS activator, hydrolase inhibitor; 3.15A {Homo sapiens}
Probab=100.00  E-value=2e-53  Score=420.93  Aligned_cols=230  Identities=30%  Similarity=0.543  Sum_probs=211.3

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      .++++.+ +||++||+                 ++++. +++|+||||+||+.+|+|+++||+|+|++||.++||++...
T Consensus        18 ~l~~~~~-~Fa~~L~~-----------------~l~~~~~~~Niv~SP~SI~~aLaml~~GA~G~T~~el~~~L~~~~~~   79 (407)
T 3f5n_A           18 FPEEAIA-DLSVNMYN-----------------RLRATGEDENILFSPLSIALAMGMMELGAQGSTQKEIRHSMGYDSLK   79 (407)
T ss_dssp             -CTHHHH-HHHHHHHH-----------------HHHHTTTTSCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC---
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHHhhCCCCCEEEchHHHHHHHHHHHhhcCchHHHHHHHHhCCCCCC
Confidence            4556666 99999999                 98877 78999999999999999999999999999999999998654


Q ss_pred             cchhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhch
Q psy2651         159 TLLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMND  235 (342)
Q Consensus       159 ~~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~  235 (342)
                      ..+         ++..++.++..+.+.+   .+.+||+||+++++++.++|++.++++|+++++.+||.+++.+++.||+
T Consensus        80 ~~~---------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~F~~~~~~~y~a~~~~vdF~~~~~a~~~IN~  150 (407)
T 3f5n_A           80 NGE---------EFSFLKEFSNMVTAKESQYVMKIANSLFVQNGFHVNEEFLQMMKKYFNAAVNHVDFSQNVAVANYINK  150 (407)
T ss_dssp             -CC---------CHHHHHHHHHHTTC-CCSCEEEEEEEEEEETTCCBCTTHHHHHHHTSCCEEEEECTTSHHHHHHHHHH
T ss_pred             HHH---------HHHHHHHHHHHHhccCCCcEEEEEEEEEEeCCCccCHHHHHHHHHhhcCceEEcCCCChHHHHHHHHH
Confidence            333         7889999999887543   8999999999999999999999999999999999999988889999999


Q ss_pred             hhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCC
Q psy2651         236 WVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDG  315 (342)
Q Consensus       236 WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~  315 (342)
                      ||+++|+|+|++++++++++++|+++|+||+||||.|+++|++.+|++++||..+|++++||||++.+. |+|+++++++
T Consensus       151 WV~~~T~gkI~~ll~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~v~V~mM~~~~~-f~y~~~~~l~  229 (407)
T 3f5n_A          151 WVENNTNNLVKDLVSPRDFDAATYLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGE-FYYGEFSDGS  229 (407)
T ss_dssp             HHHHTTTTCSCCCCCGGGCCTTCCEEEEEEEEEECCBSSCCCGGGCEEEEEECTTSCEEEEEEEEEEEE-EEEEEEECC-
T ss_pred             HHHHhhCCchhhcCCcccCCCCceEEEEEeeeeecccccCCCccCceeeeEEcCCCeEEEEeEEEEeee-eeeEEccccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999998 9999999988


Q ss_pred             ------eEEEEEeC-CCcEEEEEeecCCCCCC
Q psy2651         316 ------FKMLELPY-GVSISFIIKSQVVPEMG  340 (342)
Q Consensus       316 ------~~vLELPY-~~~~SMlI~~~ILP~~g  340 (342)
                            ++|||||| ++++||+|   |||+++
T Consensus       230 ~~~~~~~~vleLPY~~~~~sm~i---iLP~~~  258 (407)
T 3f5n_A          230 NEAGGIYQVLEIPYEGDEISMML---VLSRQE  258 (407)
T ss_dssp             ----CEEEEEEEEBTTSSEEEEE---EECCTT
T ss_pred             cccCcceEEEEEECCCCcEEEEE---EECCCC
Confidence                  99999999 99999999   899986


No 6  
>3ne4_A Alpha-1-antitrypsin; serpin, LUNG disease, liver disease, polymerisation, hydrolase inhibitor; 1.81A {Homo sapiens} PDB: 1qlp_A 2qug_A 3cwl_A 3cwm_A* 1psi_A 3drm_A 1kct_A 3dru_A 1hp7_A 1iz2_A* 1oph_A 1oo8_A 1atu_A 1d5s_B 1qmb_B
Probab=100.00  E-value=3.8e-53  Score=420.61  Aligned_cols=232  Identities=25%  Similarity=0.455  Sum_probs=213.3

Q ss_pred             ccccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCc
Q psy2651          79 VSFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHS  157 (342)
Q Consensus        79 ~~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~  157 (342)
                      ..++.+.+ +||++||+                 +++.. +++|+||||+||+.+|+|+++||+|+|++||.++||++..
T Consensus        54 ~~l~~~~~-~Fa~~L~~-----------------~l~~~~~~~Ni~~SP~SI~~aLaml~~GA~g~T~~ql~~~L~~~~~  115 (424)
T 3ne4_A           54 NKITPNLA-EFAFSLYR-----------------QLAHQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLT  115 (424)
T ss_dssp             CTTHHHHH-HHHHHHHH-----------------HHHHHCSSSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTT
T ss_pred             HHHHHHHH-HHHHHHHH-----------------HHHhhCCCCCEEECHHHHHHHHHHHHhhcccHHHHHHHHHhCCCCC
Confidence            35666777 99999999                 88876 7899999999999999999999999999999999999864


Q ss_pred             ccchhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhc
Q psy2651         158 ETLLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMN  234 (342)
Q Consensus       158 ~~~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN  234 (342)
                      +.++.+       ++..|+.++..+..++   .+.+||+||+++++++.++|++.++++|+++++.+||.+++.+++.||
T Consensus       116 ~~~~~~-------i~~~f~~ll~~l~~~~~~~~l~~an~lf~~~~~~l~~~F~~~~~~~y~a~~~~vdF~~~~~a~~~IN  188 (424)
T 3ne4_A          116 EIPEAQ-------IHEGFQELLRTLNQPDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQIN  188 (424)
T ss_dssp             TSCHHH-------HHHHHHHHHHHHTCSSCSSCCEEEEEEEEETTSCBCHHHHHHHHTTTCCEEEEECTTSHHHHHHHHH
T ss_pred             CCCHHH-------HHHHHHHHHHHhcCCCCCcEEEEEEEEEEcCCCCcCHHHHHHHHHhhcceEEEecCCChHHHHHHHH
Confidence            322222       8899999999987643   899999999999999999999999999999999999998888999999


Q ss_pred             hhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCC
Q psy2651         235 DWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGED  314 (342)
Q Consensus       235 ~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l  314 (342)
                      +||+++|+|+|+++++  +++++|+++|+|||||||.|+++|++.+|++++|+..+|++++||||++.+. |+|++++++
T Consensus       189 ~wV~~~T~gkI~~ll~--~l~~~t~lvLvNaiyFKg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~-f~y~~~~~l  265 (424)
T 3ne4_A          189 DYVEKGTQGKIVDLVK--ELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGM-FNIQHCKKL  265 (424)
T ss_dssp             HHHHHHTTTSSCSCCC--CCCTTCCEEEEEEEEEECCBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEE-EEEEEETTT
T ss_pred             HHHHHhhCCCcccccc--CCCCcchhhhhhHHhhehhhhcCCCcccceeEeeeccCCcEEEEEEEEeecc-eeEEEecCC
Confidence            9999999999999998  7999999999999999999999999999999999999999999999999998 999999999


Q ss_pred             CeEEEEEeCCCcEEEEEeecCCCCCCC
Q psy2651         315 GFKMLELPYGVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       315 ~~~vLELPY~~~~SMlI~~~ILP~~g~  341 (342)
                      +++||||||.+++||+|   |||++|.
T Consensus       266 ~~~vleLPY~~~~sm~i---iLP~~~~  289 (424)
T 3ne4_A          266 SSWVLLMKYLGNATAIF---FLPDEGK  289 (424)
T ss_dssp             TEEEEEEEETTTEEEEE---EEECTTC
T ss_pred             CeEEEEEecCCCeEEEE---EEcCcCC
Confidence            99999999933589999   8999875


No 7  
>2h4p_A MENT, heterochromatin-associated protein MENT; serine protease inhibitor, serpin, hydrolase inhibitor; 1.70A {Gallus gallus} PDB: 2h4q_A
Probab=100.00  E-value=4.2e-53  Score=417.01  Aligned_cols=239  Identities=31%  Similarity=0.558  Sum_probs=211.8

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      ++.++.+ +||++||+                 ++... +++|+||||+||+.+|+|+++||+|+|++||.++||++...
T Consensus        28 ~l~~~~~-~Fa~~L~k-----------------~l~~~~~~~Niv~SP~SI~~aLaml~~GA~G~T~~el~~~L~~~~~~   89 (394)
T 2h4p_A           28 QVSASIG-NFTVDLFN-----------------KLNETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHFTEAV   89 (394)
T ss_dssp             HHHHHHH-HHHHHHHH-----------------HHHHHCTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTSSCC-
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHhccCCCCCEEEChHHHHHHHHHHHHhccChHHHHHHHHhCCCccc
Confidence            3455566 99999999                 88776 78999999999999999999999999999999999998632


Q ss_pred             cc---h-----------hccc---chhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhccccc
Q psy2651         159 TL---L-----------KDYK---GIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSEL  218 (342)
Q Consensus       159 ~~---~-----------~~~~---~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v  218 (342)
                      ..   .           .+++   ...+.++..|+.++..+...+   .+.+||+||+++++++.++|++.++++|++++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~F~~~~~~~y~a~~  169 (394)
T 2h4p_A           90 RAESSSVARPSRGRPKRRRMDPEHEQAENIHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEP  169 (394)
T ss_dssp             -----------------------CCCCHHHHHHHHHHHHHHTCCCSSSEEEEEEEEEEETTSCCCHHHHHHHHHHHCCEE
T ss_pred             ccccccccccccccccccccccccccHHHHHHHHHHHHHHhhcCCCCcEEEEEEEEEEeCCCCccHHHHHHHHHHhCCee
Confidence            00   0           0000   000128899999999887643   89999999999999999999999999999999


Q ss_pred             EEecC-CCcHHHHHhhchhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEe
Q psy2651         219 GKVDF-SQPPAAAKEMNDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVP  297 (342)
Q Consensus       219 ~~vdF-~~~~~a~~~IN~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~Vp  297 (342)
                      +.+|| .+++++++.||+||+++|+|+|++++++++++++|+++|+||+||||.|+++|++..|++++|+..+|+.++||
T Consensus       170 ~~vdF~~~~~~a~~~IN~WV~~~T~gkI~~ll~~~~l~~~T~lvLvNAiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~  249 (394)
T 2h4p_A          170 QKVNFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVK  249 (394)
T ss_dssp             EEECTTTCHHHHHHHHHHHHHHHTTTCC-CCSCTTTSCTTCCEEEEEEEEEEEEBSSCCCGGGCEEEEEEEETTEEEEEE
T ss_pred             EEecCcCCHHHHHHHHHHHHHHhhCCchhhccCccccCCccceeeeeeeeEEceeCCCCCcccccceEEEecCCeEEECc
Confidence            99999 56778999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeecceeeeEEEeCCCCeEEEEEeC-CCcEEEEEeecCCCCCC
Q psy2651         298 LMFVKDSFYMYEEAGEDGFKMLELPY-GVSISFIIKSQVVPEMG  340 (342)
Q Consensus       298 MM~~~~~~f~y~~~~~l~~~vLELPY-~~~~SMlI~~~ILP~~g  340 (342)
                      ||++.+. |+|+++++++++|||||| ++++||+|   |||+++
T Consensus       250 mM~~~~~-f~~~~~~~l~~~vleLPY~~~~~sM~i---iLP~~~  289 (394)
T 2h4p_A          250 MMYMRDT-FPVLIMEKMNFKMIELPYVKRELSMFI---LLPDDI  289 (394)
T ss_dssp             EEEEEEE-EEEEEETTTTEEEEEEEBGGGSEEEEE---EEESSC
T ss_pred             eEeccCc-eeeEEeCCCCEEEEEeecCCCcEEEEE---EecCCC
Confidence            9999998 999999999999999999 99999999   899986


No 8  
>3nda_A Serpin-2; vaccination target, TICK, hydrolase inhibitor; HET: 1PE; 1.80A {Ixodes ricinus}
Probab=100.00  E-value=3.7e-53  Score=415.18  Aligned_cols=229  Identities=31%  Similarity=0.547  Sum_probs=209.2

Q ss_pred             cccccccccccccccccCCcchhhhhhhhhhhhhccCCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcccch
Q psy2651          82 SSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLL  161 (342)
Q Consensus        82 ~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~~~  161 (342)
                      +++.+ +||++||+                 ++++..++|+||||+||+.+|+|+++||+|+|++||.++||++..+..+
T Consensus         8 ~~~~~-~Fa~~l~~-----------------~l~~~~~~Ni~~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~   69 (377)
T 3nda_A            8 TKANN-RFGLRLLR-----------------ALPSGPEKNVFFSPYSVSTAMGMAFAGARGQTQQELSQGLGFSDVDLTD   69 (377)
T ss_dssp             HHHHH-HHHHHHHH-----------------HSCCBTTBCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTTGGGTCCH
T ss_pred             HHHHH-HHHHHHHH-----------------HHhhcCCCCEEEecHHHHHHHHHHHhhccchhHHHHHHHhCCCCcCCCH
Confidence            34445 99999999                 8865457899999999999999999999999999999999998543222


Q ss_pred             hcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecC-CCcHHHHHhhchhh
Q psy2651         162 KDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDF-SQPPAAAKEMNDWV  237 (342)
Q Consensus       162 ~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF-~~~~~a~~~IN~WV  237 (342)
                      ++       ++..|+.++..+.+.+   .+.+||+||+++++++.++|++.++++|+++++.+|| .+++.+++.||+||
T Consensus        70 ~~-------i~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~wV  142 (377)
T 3nda_A           70 AG-------VLDAYTHHTERLKSTPSNSTLDVANAAAIQRTLALLNSYESALQSSFGAELHKVDFAGEPQAAVDFVNNWV  142 (377)
T ss_dssp             HH-------HHHHHHHHHHHHHHCCCSSEEEEEEEEEEETTCCCCHHHHHHHHHHHCCEEEEECTTTCHHHHHHHHHHHH
T ss_pred             HH-------HHHHHHHHHHHhcCCCCCcEEEEEeEEEEeCCCCchHHHHHHHHHhccCceEEecCCCCHHHHHHHHHHHH
Confidence            22       8889999988875432   8999999999999999999999999999999999999 67777999999999


Q ss_pred             hcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCCeE
Q psy2651         238 SNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDGFK  317 (342)
Q Consensus       238 ~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~~~  317 (342)
                      +++|+|+|++++ +++++++|+++|+||+||||.|+++|++.+|++++||..+|++++||||++.+. |+|+++++++++
T Consensus       143 ~~~T~g~I~~ll-~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~-~~y~~~~~~~~~  220 (377)
T 3nda_A          143 KRKTHDKIEKLF-NEPLDPDTLLVLLNAIYFKGEWNTAFVKEHTEKRQFFNGGVTPVEVDTMRLEAR-IKYRFFDDLQVE  220 (377)
T ss_dssp             HHHTTTSCCCSC-SSCCCTTCCEEEEEEEEEEEEBSSCCCGGGCEEEEEEETTTEEEEEEEEEEEEE-EEEEEETTTTEE
T ss_pred             HHHhcCchhhhc-CCCCCCCceEEEEehheeccccccCCCCccccccceecCCCeEEEEeeEeeECe-EEEEEEcCCCeE
Confidence            999999999999 889999999999999999999999999999999999999999999999999998 999999999999


Q ss_pred             EEEEeC-CCcEEEEEeecCCCCCC
Q psy2651         318 MLELPY-GVSISFIIKSQVVPEMG  340 (342)
Q Consensus       318 vLELPY-~~~~SMlI~~~ILP~~g  340 (342)
                      |||||| ++++||+|   |||+++
T Consensus       221 vleLPy~~~~~sm~i---iLP~~~  241 (377)
T 3nda_A          221 VVELPYRGLDYTMAI---LLPKEN  241 (377)
T ss_dssp             EEEEEBTTSSEEEEE---EEESST
T ss_pred             EEEEecCCCcEEEEE---EEcCCC
Confidence            999999 88999999   899964


No 9  
>4ga7_A Leukocyte elastase inhibitor; serpin, conformational change, serine protease inhibitor, Ca inhibitor, chymase inhibitor, chymotrypsin inhibitor; 2.90A {Homo sapiens}
Probab=100.00  E-value=3.6e-53  Score=416.79  Aligned_cols=221  Identities=32%  Similarity=0.576  Sum_probs=209.4

Q ss_pred             cccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcccchhcccc
Q psy2651          88 RFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKG  166 (342)
Q Consensus        88 ~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~~~~~~~~  166 (342)
                      +||++||+                 ++.+. +++|+||||+||+.+|+|+++||+|+|++||.++||++..+  +     
T Consensus        20 ~Fa~~L~~-----------------~l~~~~~~~Ni~~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~--~-----   75 (389)
T 4ga7_A           20 RFALDLFL-----------------ALSENNPAGNIFISPFSISSAMAMVFLGTRGNTAAQLSKTFHFNTVE--E-----   75 (389)
T ss_dssp             HHHHHHHH-----------------HHHHHCSSSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTGGGCT--T-----
T ss_pred             HHHHHHHH-----------------HHhhcCCCCCEEEchHHHHHHHHHHHhhccCcHHHHHHHHhCCCCHH--H-----
Confidence            99999999                 98876 78999999999999999999999999999999999997543  3     


Q ss_pred             hhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCC-cHHHHHhhchhhhcccC
Q psy2651         167 IIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQ-PPAAAKEMNDWVSNHTN  242 (342)
Q Consensus       167 ~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~-~~~a~~~IN~WV~~~T~  242 (342)
                          ++..|+.++..+.+.+   .+.+||+||++++++++++|++.++++|+++++.+||.+ ++.+++.||+||+++|+
T Consensus        76 ----~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~WV~~~T~  151 (389)
T 4ga7_A           76 ----VHSRFQSLNADINKRGASYILKLANRLYGEKTYNFLPEFLVSTQKTYGADLASVDFQHASEDARKTINQWVKGQTE  151 (389)
T ss_dssp             ----HHHHHHHHHHHHTCTTCSSEEEEEEEEEEETTSCBCHHHHHHHHHHTSCCEEEECHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ----HHHHHHHHHHHHhCCCCCcEEEEeeeeeecCCCccCHHHHHHHHHHhCCeeEecccccCHHHHHHHHHHHHHHhhC
Confidence                8899999999887543   899999999999999999999999999999999999987 56788999999999999


Q ss_pred             CccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCCeEEEEEe
Q psy2651         243 DKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDGFKMLELP  322 (342)
Q Consensus       243 g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~~~vLELP  322 (342)
                      |+|++++++++++++|+++|+||+||||.|+++|++.+|++++||..+|++++||||++.+. |+|+++++++++|||||
T Consensus       152 g~I~~ll~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~-~~~~~~~~~~~~vleLP  230 (389)
T 4ga7_A          152 GKIPELLASGMVDNMTKLVLVNAIYFKGNWKDKFMKEATTNAPFRLNKKDRKTVKMMYQKKK-FAYGYIEDLKCRVLELP  230 (389)
T ss_dssp             TSSTTSSCTTSSCTTCCEEEEEEEEEECCBSSCCCTTTCEEEEEEEETTEEEEEEEEEEEEE-EEEEEETTTTEEEEEEE
T ss_pred             CchhhccCCCCCCCCceEEEEEEEEEEeeecCCCCccCccccceEeCCCcEEEEEEEEEeee-EEEEEECCCCEEEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999998 99999999999999999


Q ss_pred             C-CCcEEEEEeecCCCCCC
Q psy2651         323 Y-GVSISFIIKSQVVPEMG  340 (342)
Q Consensus       323 Y-~~~~SMlI~~~ILP~~g  340 (342)
                      | ++++||+|   |||+++
T Consensus       231 y~~~~~sm~i---iLP~~~  246 (389)
T 4ga7_A          231 YQGEELSMVI---LLPDDI  246 (389)
T ss_dssp             BTTSSEEEEE---EEESSC
T ss_pred             CCCCCEEEEE---EecCCC
Confidence            9 99999999   899985


No 10 
>1uhg_A Ovalbumin, S-ovalbumin; allergen, egg white protein, serpin; HET: SEP NAG; 1.90A {Gallus gallus} SCOP: e.1.1.1 PDB: 1ova_A* 1jti_A
Probab=100.00  E-value=6e-53  Score=414.63  Aligned_cols=228  Identities=25%  Similarity=0.468  Sum_probs=209.8

Q ss_pred             cccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCccc-
Q psy2651          82 SSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSET-  159 (342)
Q Consensus        82 ~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~-  159 (342)
                      .++.+ +||++||+                 ++.+. +++|+||||+||+.+|+|+++||+|+|++||.++||++.... 
T Consensus         4 ~~~~~-~Fa~~l~~-----------------~l~~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~   65 (385)
T 1uhg_A            4 GAASM-EFCFDVFK-----------------ELKVHHANENIFYCPIAIMSALAMVYLGAKDSTRTQINKVVRFDKLPGF   65 (385)
T ss_dssp             HHHHH-HHHHHHHH-----------------HHHHHCTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHHTCTTCTTC
T ss_pred             hhHHH-HHHHHHHH-----------------HHHhcCCCCCEEECHHHHHHHHHHHHhhccCcHHHHHHHHhCCCccccc
Confidence            34455 99999999                 88776 789999999999999999999999999999999999986531 


Q ss_pred             --------c---hhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecC-C
Q psy2651         160 --------L---LKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDF-S  224 (342)
Q Consensus       160 --------~---~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF-~  224 (342)
                              .   +         ++..|+.++..+.+.+   .+.+||+||+++++++.++|++.++++|+++++.+|| .
T Consensus        66 ~~~~~~~~~~~~~---------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~  136 (385)
T 1uhg_A           66 GDSIEAQCGTSVN---------VHSSLRDILNQITKPNDVYSFSLASRLYAEERYPILPEYLQCVKELYRGGLEPINFQT  136 (385)
T ss_dssp             SHHHHTTTTSCTT---------TTHHHHHHHHHHTSCCSSEEEEEEEEEEEETTSCBCHHHHHHHHHHCSSCEEEECCTT
T ss_pred             ccccccccchHHH---------HHHHHHHHHHHHhCCCCCcEEEEEEEeeccCCCCccHHHHHHHHHHhCCEEEEecCCC
Confidence                    1   3         7888999999887643   8999999999999999999999999999999999999 6


Q ss_pred             CcHHHHHhhchhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecce
Q psy2651         225 QPPAAAKEMNDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDS  304 (342)
Q Consensus       225 ~~~~a~~~IN~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~  304 (342)
                      +++++++.||+||+++|+|+|++++++++++++|+++|+||+||||.|+++|++..|++++||..+|++++||||++.+.
T Consensus       137 ~~~~a~~~IN~wV~~~T~gkI~~l~~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~  216 (385)
T 1uhg_A          137 AADQARELINSWVESQTNGIIRNVLQPSSVDSQTAMVLVNAIVFKGLWEKAFKDEDTQAMPFRVTEQESKPVQMMYQIGL  216 (385)
T ss_dssp             THHHHHHHHHHHHHHHTTTCSCCCSCTTSSCTTCCEEEEEEEEEEECEEECCCGGGCEEEEECCCC--CEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHhcCchhhhCCcccCCCccceEeeeeeEEeeeecCCCCcCCCcCcEEEECCCeEEEEEEEEeece
Confidence            67789999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             eeeEEEeCCCCeEEEEEeC-CCcEEEEEeecCCCCCC
Q psy2651         305 FYMYEEAGEDGFKMLELPY-GVSISFIIKSQVVPEMG  340 (342)
Q Consensus       305 ~f~y~~~~~l~~~vLELPY-~~~~SMlI~~~ILP~~g  340 (342)
                       |+|+++++++++|||||| ++++||+|   |||+++
T Consensus       217 -~~~~~~~~~~~~vleLPy~~~~~sm~i---iLP~~~  249 (385)
T 1uhg_A          217 -FRVASMASEKMKILELPFASGTMSMLV---LLPDEV  249 (385)
T ss_dssp             -EEEEEEGGGTEEEEEEEBTTSSEEEEE---EEESST
T ss_pred             -EEEEEeCCCCeEEEEeccCCCcEEEEE---EeCCCC
Confidence             999999999999999999 99999999   899986


No 11 
>2xn6_A Thyroxine-binding globulin; transport, cleaved protein; HET: F6Y T44; 1.29A {Homo sapiens} PDB: 2xn7_A* 2xn5_A* 2riv_A 2xn3_A* 2riw_A*
Probab=100.00  E-value=7.2e-53  Score=409.33  Aligned_cols=229  Identities=30%  Similarity=0.496  Sum_probs=209.1

Q ss_pred             ccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCccc
Q psy2651          81 FSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSET  159 (342)
Q Consensus        81 ~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~  159 (342)
                      +.+..+ +||++||+                 ++... +++|+||||+||+.+|+|+++||+|+|++||.++||++..+.
T Consensus        11 l~~~~~-~Fa~~l~~-----------------~l~~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~   72 (350)
T 2xn6_A           11 MSSINA-DFAFNLYR-----------------RFTVETPDKNIFFSPVSISAALVMLSFGACCSTQTEIVETLGFNLTDT   72 (350)
T ss_dssp             HHHHHH-HHHHHHHH-----------------HHHHHSTTSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHTTCCTTTS
T ss_pred             HHHHHH-HHHHHHHH-----------------HHHhcCCCCCEEEchHHHHHHHHHHHhhccChHHHHHHHHhCCCccCC
Confidence            444556 99999999                 88766 788999999999999999999999999999999999976432


Q ss_pred             chhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhchh
Q psy2651         160 LLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMNDW  236 (342)
Q Consensus       160 ~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~W  236 (342)
                      +..+       ++..|+.++..+...+   .+.+||+||+++++++.++|.+.++++|+++++.+||.++.++++.||+|
T Consensus        73 ~~~~-------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN~W  145 (350)
T 2xn6_A           73 PMVE-------IQHGFQHLICSLNFPKKELELQIGNALFIGKHLKPLAKFLNDVKTLYETEVFSTDFSNISAAKQEINSH  145 (350)
T ss_dssp             CHHH-------HHHHHHHHHHHHHSCBTTEEEEEEEEEEEETTCCBCHHHHHHHHHHSCEEEEEECTTSHHHHHHHHHHH
T ss_pred             CHHH-------HHHHHHHHHHHhhCCCCCcEEEEEEeehhhCCCcHHHHHHHHHHHHhCCEEEeeCCCCHHHHHHHHHHH
Confidence            2212       8899999998886543   89999999999999999999999999999999999999888899999999


Q ss_pred             hhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccC-eeecCCCeEEEeeeeecceeeeEEEeCCCC
Q psy2651         237 VSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGP-FYLDDTNSVQVPLMFVKDSFYMYEEAGEDG  315 (342)
Q Consensus       237 V~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~-F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~  315 (342)
                      |+++|+|+|+++++  +++++|+++|+||+||||.|+++|++..|++++ ||..+|+.++||||++.+. |+|+++++++
T Consensus       146 V~~~T~gkI~~ll~--~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~~F~~~~~~~~~V~mM~~~~~-~~~~~~~~l~  222 (350)
T 2xn6_A          146 VEMQTKGKVVGLIQ--DLKPNTIMVLVNYIHFKAQWANPFDPSKTEDSSSFLIDKTTTVQVPMMHQMDQ-YYHLVDMELN  222 (350)
T ss_dssp             HHHHTTTCSCCCCS--CCCTTCCEEEEEEEEEEEEBSSCCCGGGCEEEEEEEEETTEEEEEEEEEEEEE-EEEEEETTTT
T ss_pred             HHHhhCCchhhhhc--ccCCCceeeeeeHHHHhhHhhccCChhhCccCCceEeCCCcEEEEEEEEEeee-EeEEEeCCCC
Confidence            99999999999996  599999999999999999999999999999999 9999999999999999998 9999999999


Q ss_pred             eEEEEEeC-CCcEEEEEeecCCCCCCC
Q psy2651         316 FKMLELPY-GVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       316 ~~vLELPY-~~~~SMlI~~~ILP~~g~  341 (342)
                      ++|||||| |+. ||+|   |||++|.
T Consensus       223 ~~vleLPy~~~~-sm~i---iLP~~~~  245 (350)
T 2xn6_A          223 CTVLQMDYSKNA-LALF---VLPKEGQ  245 (350)
T ss_dssp             EEEEEEEBSSSE-EEEE---EEECTTC
T ss_pred             eEEEEeecCCCe-EEEE---EecCCCC
Confidence            99999999 664 9999   7999864


No 12 
>3ozq_A Serpin48; SPE, hydrolase I; 1.90A {Tenebrio molitor}
Probab=100.00  E-value=1.1e-52  Score=411.72  Aligned_cols=228  Identities=33%  Similarity=0.523  Sum_probs=210.3

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhccCCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCccc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSET  159 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~  159 (342)
                      +++++.+ +||++||+                 ++...+++|+||||+||+.+|+|+++||+|+|++||.++||++... 
T Consensus        10 ~l~~~~~-~Fa~~l~~-----------------~l~~~~~~Ni~~SP~Si~~aLaml~~GA~g~T~~ql~~~L~~~~~~-   70 (376)
T 3ozq_A           10 EFPNAVN-SFTPSVYK-----------------EVLKTEKANFLVSPFSAATLLALAQSGCRGDTAEEIRQVLHFVGDR-   70 (376)
T ss_dssp             HHHHHHH-HHHHHHHH-----------------HHHHHCCSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHTTCCSCH-
T ss_pred             HHHHHHh-HHHHHHHH-----------------HHhhCCCCCEEEcHHHHHHHHHHHHhHCchHHHHHHHHHHCCCCcH-
Confidence            3444555 99999999                 8873388999999999999999999999999999999999995433 


Q ss_pred             chhcccchhHHHHHHHHHHHHHhCCCc-chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhchhhh
Q psy2651         160 LLKDYKGIIDQLSKDYKGIIDQLSKSP-ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMNDWVS  238 (342)
Q Consensus       160 ~~~~~~~~~~~v~~~~~~l~~~l~~~~-~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~WV~  238 (342)
                      .+         ++..++.++..+...+ .+.+||+||+++++++.++|++.++++|+++++.+||.+++++++.||+||+
T Consensus        71 ~~---------~~~~~~~~l~~l~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN~wV~  141 (376)
T 3ozq_A           71 EK---------AEGAVKEVLSKLTNEEYTLHTANKIYVKTNFSVREEFQKIAVEVYGAQSENVDFSEKNDAAKLMNAWVE  141 (376)
T ss_dssp             HH---------HHHHHHHHHHHTBCSSCEEEEEEEEEEETTSCCCHHHHHHHHHTTSCEEEEECCSSHHHHHHHHHHHHH
T ss_pred             HH---------HHHHHHHHHHHhcCCCcEEeeehhHHHhCCCcchHHHHHHHHHhhCCeeEEecCCChHHHHHHHHHHHH
Confidence            22         7888888888876444 8999999999999999999999999999999999999998889999999999


Q ss_pred             cccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeee-ecceeeeEEEeCCCCeE
Q psy2651         239 NHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMF-VKDSFYMYEEAGEDGFK  317 (342)
Q Consensus       239 ~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~-~~~~~f~y~~~~~l~~~  317 (342)
                      ++|+|+|++++++++++++|+++|+||+||||.|+++|++.+|++++||..+|++++||||+ +.+. |+|+++++++++
T Consensus       142 ~~T~gkI~~ll~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~-~~y~~~~~~~~~  220 (376)
T 3ozq_A          142 EQTQHKIQNLVDPEILNNLTRVVLINALYFNAKWLVPFPPFHTRKSDFHKSAKEVVQVDTMYLDEQY-FNYYECHHLDAK  220 (376)
T ss_dssp             HHTTTCSCCCSCGGGCCTTCCEEEEEEEEEEEEBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEE-EEEEEETTTTEE
T ss_pred             hhhcCchhhccCcccCCCcceEEEEehhhhhhhhccCCCcccceeeeeEecCCcEEEEeehhhccCc-eeEEEecCCCeE
Confidence            99999999999988999999999999999999999999999999999999999999999999 9998 999999999999


Q ss_pred             EEEEeC-CCcEEEEEeecCCCCCC
Q psy2651         318 MLELPY-GVSISFIIKSQVVPEMG  340 (342)
Q Consensus       318 vLELPY-~~~~SMlI~~~ILP~~g  340 (342)
                      |||||| ++ +||+|   |||+++
T Consensus       221 vleLPy~~~-~sm~i---iLP~~~  240 (376)
T 3ozq_A          221 LLELPFKGG-ASLTI---VLSNQI  240 (376)
T ss_dssp             EEEEEBTTS-CEEEE---EEESST
T ss_pred             EEEEeCCCC-EEEEE---EeCCCC
Confidence            999999 77 99999   899975


No 13 
>4au2_A HSP47, serpin peptidase inhibitor, clade H (heat shock P 47), member 1, (collagen binding...; chaperone-peptide complex; 2.30A {Canis lupus familiaris} PDB: 4au3_A 4au4_A 4awr_A 4au3_B
Probab=100.00  E-value=1.4e-52  Score=413.03  Aligned_cols=229  Identities=21%  Similarity=0.404  Sum_probs=212.0

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      +++++.+ +||++||+                 ++++. +++|+||||+||+.+|+|+++||+|+|++||.++||++...
T Consensus         8 ~l~~~~~-~Fa~~L~~-----------------~l~~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~   69 (392)
T 4au2_A            8 TLAERSA-GLAFSLYQ-----------------AMAKDQAVENILLSPVVVASSLGLVSLGGKATTASQAKAVLSAEQLR   69 (392)
T ss_dssp             HHHHHHH-HHHHHHHH-----------------HHHHCTTCCSEEECHHHHHHHHHHHHHHCCHHHHHHHHHHTTCTTSC
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHhhcCCCCeEEECHHHHHHHHHHHHhhcCcHHHHHHHHhcCCCCCC
Confidence            3445556 99999999                 99887 88999999999999999999999999999999999998655


Q ss_pred             cchhcccchhHHHHHHHHHHHHHhCCCc----chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhc
Q psy2651         159 TLLKDYKGIIDQLSKDYKGIIDQLSKSP----ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMN  234 (342)
Q Consensus       159 ~~~~~~~~~~~~v~~~~~~l~~~l~~~~----~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN  234 (342)
                      ..+         ++..+++++..+....    .+.+||+||+++++++.++|++.++++|+++++.+||.+++.+++.||
T Consensus        70 ~~~---------~~~~~~~l~~~l~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN  140 (392)
T 4au2_A           70 DEE---------VHAGLGELLRSLSNSTARNVTWKLGSRLYGPSSVSFAEDFVRSSKQHYNCEHSKINFRDKRSALQSIN  140 (392)
T ss_dssp             HHH---------HHHHHHHHHHHTTC-----CCCEEEEEEEEETTCCCCHHHHHHHHHHHCEEEEEECTTSHHHHHHHHH
T ss_pred             HHH---------HHHHHHHHHHHHhcCCCCCceEEEEEEEEeecCCchhHHHHHHHHHhhCCeeEEecCCChHHHHHHHH
Confidence            333         8899999998885432    789999999999999999999999999999999999999888999999


Q ss_pred             hhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCC
Q psy2651         235 DWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGED  314 (342)
Q Consensus       235 ~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l  314 (342)
                      +||+++|+|+|+++++  +++++|+++|+||+||||.|+++|++..|++++||..+|++++||||++.+. ++|++++++
T Consensus       141 ~WV~~~T~gkI~~l~~--~~~~~t~lvLvNAiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~-~~~~~~~~~  217 (392)
T 4au2_A          141 EWAAQTTDGKLPEVTK--DVERTDGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSYTVGVTMMHRTGL-YNYYDDEKE  217 (392)
T ss_dssp             HHHHHHTTTSSCCSCS--CCCCSSSEEEEEEEEECCCBSSCCCTTSEEEEEEESSSSCEEEEEEEEEEEE-EEEEEETTT
T ss_pred             HHHHHhcCCCccchhc--ccCCcchhhheehhheeccccCCCCccccccCceecCCCceeEEeeeeecce-eeEEeeccC
Confidence            9999999999999996  6999999999999999999999999999999999999999999999999998 999999999


Q ss_pred             CeEEEEEeC-CCcEEEEEeecCCCCCCC
Q psy2651         315 GFKMLELPY-GVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       315 ~~~vLELPY-~~~~SMlI~~~ILP~~g~  341 (342)
                      ++++||||| ++.+||+|   |||+++.
T Consensus       218 ~~~vleLPy~~~~~sm~i---llP~~~~  242 (392)
T 4au2_A          218 KLQIVEMPLAHKLSSLII---LMPHHVE  242 (392)
T ss_dssp             TEEEEEEEBGGGSEEEEE---EEESSSC
T ss_pred             ceeEEEeecCCCcEEEEE---EeCCCCC
Confidence            999999999 99999999   7999864


No 14 
>2zv6_A Serpin B3; serine proteinase inhibitor, reactive site loop, acetylation, alternative splicing, cytoplasm, polymorphism, protease inhibitor; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.1e-52  Score=414.89  Aligned_cols=229  Identities=30%  Similarity=0.523  Sum_probs=209.0

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      ++.+..+ +||++||+                 ++.+. + +|+||||+||+.+|+|+++||+|+|++||.++||++...
T Consensus        14 ~~~~~~~-~Fa~~l~~-----------------~l~~~~~-~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~   74 (401)
T 2zv6_A           14 SLSEANT-KFMFDLFQ-----------------QFRKSKE-NNIFYSPISITSALGMVLLGAKDNTAQQIKKVLHFDQVT   74 (401)
T ss_dssp             HHHHHHH-HHHHHHHH-----------------HHHHHCC-SCEEECHHHHHHHHHHHHHTCCTHHHHHHHHHTTC----
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHhhCCC-CCEEEchHHHHHHHHHHHHhccChHHHHHHHHhCCCccc
Confidence            4445556 99999999                 88766 6 999999999999999999999999999999999997642


Q ss_pred             --------------cchhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEe
Q psy2651         159 --------------TLLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKV  221 (342)
Q Consensus       159 --------------~~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~v  221 (342)
                                    ..+         ++..|+.++..+.+.+   .+.+||+||+++++++.++|++.++++|+++++.+
T Consensus        75 ~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~v  145 (401)
T 2zv6_A           75 ENTTGKAATYHVDRSGN---------VHHQFQKLLTEFNKSTDAYELKIANKLFGEKTYLFLQEYLDAIKKFYQTSVESV  145 (401)
T ss_dssp             ----------------C---------THHHHHHHHHHHHSCCSSCCEEEECCEEEETTSCCCHHHHHHHHHHHSCCEEEE
T ss_pred             ccccccccccccccHHH---------HHHHHHHHHHHhhCCCCCcEEEEEEEEEecCCCChhHHHHHHHHHHhCCEEEEc
Confidence                          122         7888999988886543   89999999999999999999999999999999999


Q ss_pred             cC-CCcHHHHHhhchhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeee
Q psy2651         222 DF-SQPPAAAKEMNDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMF  300 (342)
Q Consensus       222 dF-~~~~~a~~~IN~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~  300 (342)
                      || .+++++++.||+||+++|+|+|++++++++++++|+++|+||+||||.|+++|++..|++++|+..+|+.++||||+
T Consensus       146 dF~~~~~~a~~~IN~WV~~~T~gkI~~ll~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~  225 (401)
T 2zv6_A          146 DFANAPEESRKKINSWVESQTNEKIKNLIPEGNIGSNTTLVLVNAIYFKGQWEKKFNKEDTKEEKFWPNKNTYKSIQMMR  225 (401)
T ss_dssp             CTTTCHHHHHHHHHHHHHHHTTTCSCCSSCTTTSCTTCCEEEEEEEEECCCBSSCCCTTSEEEEEECSSSSCCEEEEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHhhCCccccccCcccCCCcceEEEEEhheeccccCCCCCCCCceeeEEEecCCceEEeEEEe
Confidence            99 56778999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecceeeeEEEeCCCCeEEEEEeC-CCcEEEEEeecCCCCCC
Q psy2651         301 VKDSFYMYEEAGEDGFKMLELPY-GVSISFIIKSQVVPEMG  340 (342)
Q Consensus       301 ~~~~~f~y~~~~~l~~~vLELPY-~~~~SMlI~~~ILP~~g  340 (342)
                      +.+. |+|+++++++++|||||| ++++||+|   |||+++
T Consensus       226 ~~~~-f~~~~~~~l~~~vleLPY~~~~~sm~i---iLP~~~  262 (401)
T 2zv6_A          226 QYTS-FHFASLEDVQAKVLEIPYKGKDLSMIV---LLPNEI  262 (401)
T ss_dssp             EEEE-EEECEETTTTEEEEEEEBTTSSSEEEE---EEESST
T ss_pred             ccCc-eeEEEeCCCCEEEEEeecCCCcEEEEE---EecCCC
Confidence            9998 999999999999999999 99999999   899975


No 15 
>1as4_A Antichymotrypsin, ACT; serpin, serine protease inhibitor; 2.10A {Homo sapiens} SCOP: e.1.1.1 PDB: 2ach_A* 4caa_A 3caa_A
Probab=100.00  E-value=1.2e-52  Score=406.44  Aligned_cols=231  Identities=32%  Similarity=0.535  Sum_probs=208.9

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      ++++..+ +||++||+                 ++... +++|+||||+||+.+|+|+++||+|+|++||.++||++...
T Consensus         6 ~l~~~~~-~Fa~~l~~-----------------~l~~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~   67 (341)
T 1as4_A            6 GLASANV-DFAFSLYK-----------------QLVLKAPDKNVIFSPLSISTALAFLSLGAHNTTLTEILKGLKFNLTE   67 (341)
T ss_dssp             CHHHHHH-HHHHHHHH-----------------HHHHHCTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTTT
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHhccCCCCcEEEchHHHHHHHHHHHhhccChHHHHHHHHhCCCCcC
Confidence            3445556 99999999                 88766 78899999999999999999999999999999999997643


Q ss_pred             cchhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhch
Q psy2651         159 TLLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMND  235 (342)
Q Consensus       159 ~~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~  235 (342)
                      .+..+       ++..|+.++..+...+   .+.+||+||+++++++.++|.+.++++|+++++.+||.++.++++.||+
T Consensus        68 ~~~~~-------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN~  140 (341)
T 1as4_A           68 TSEAE-------IHQSFQHLLRTLNQSSDELQLSMGNAMFVKEQLSLLDRFTEDAKRLYGSEAFATDFQDSAAAKKLIND  140 (341)
T ss_dssp             SCHHH-------HHHHHHHHHHHHCEECSSCEEEEEEEEEEETTCCCCHHHHHHHHHHHCCEEEEECTTSHHHHHHHHHH
T ss_pred             CCHHH-------HHHHHHHHHHHHhccCCCcEEEeeehhHHhCCCchhHHHHHHHHHHhCCceEecCCCCHHHHHHHHHH
Confidence            22212       8899999999886533   8999999999999999999999999999999999999988889999999


Q ss_pred             hhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCC
Q psy2651         236 WVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDG  315 (342)
Q Consensus       236 WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~  315 (342)
                      ||+++|+|+|+++++  +++++|+++|+||+||||.|+++|++..|++++||..+|++++||||++.+..|+|+++++++
T Consensus       141 WV~~~T~gkI~~ll~--~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~y~~~~~l~  218 (341)
T 1as4_A          141 YVKNGTRGKITDLIK--DLDSQTMMVLVNYIFFKAKWEMPFDPQDTHQSRFYLSKKKWVMVPMMSLHHLTIPYFRDEELS  218 (341)
T ss_dssp             HHHHHTTTSCCCSCC--CCCTTEEEEEEEEEEEEEEBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEEEEEEEEETTTT
T ss_pred             HHHHhhcCchhhHhh--ccCCCceEEEEEhHhhcchhcCCCCccccccceeEeCCCeEEEEEEEEecCceEEEEEecCCC
Confidence            999999999999996  599999999999999999999999999999999999999999999999998438999999999


Q ss_pred             eEEEEEeC-CCcEEEEEeecCCCCCCC
Q psy2651         316 FKMLELPY-GVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       316 ~~vLELPY-~~~~SMlI~~~ILP~~g~  341 (342)
                      ++|||||| ++. ||+|   |||++|.
T Consensus       219 ~~vleLPY~~~~-sm~i---iLP~~~~  241 (341)
T 1as4_A          219 CTVVELKYTGNA-SALF---ILPDQDK  241 (341)
T ss_dssp             EEEEEEEBSSSE-EEEE---EEECTTC
T ss_pred             eEEEEecCCCCc-EEEE---EeeCCCC
Confidence            99999999 664 9999   7999864


No 16 
>3sto_A Serine protease inhibitor; serpin fold, hydrolase inhibitor; 2.41A {Schistosoma haematobium}
Probab=100.00  E-value=2.3e-52  Score=413.19  Aligned_cols=230  Identities=23%  Similarity=0.482  Sum_probs=203.5

Q ss_pred             ccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHc--cCChhHHHHHHHHcCCCCc
Q psy2651          81 FSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASF--GAAGSTAEAMMKGLRIKHS  157 (342)
Q Consensus        81 ~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~--GA~G~T~~qL~~~Lgl~~~  157 (342)
                      .+.+.+ +||++||+                 +++.. +++|+||||+||+.+|+|+++  ||+|+|++||.++||++..
T Consensus        15 ~~~~~~-~Fa~~l~~-----------------~l~~~~~~~Ni~~SP~Si~~aLaml~~~~GA~g~T~~ql~~~L~~~~~   76 (406)
T 3sto_A           15 NISSHK-AFTHAYLS-----------------TVTADFGGDNFLTCPLGILFTLGILLGSGGAQGRTGYQIGKTMRLKST   76 (406)
T ss_dssp             -CCHHH-HHHHHHHH-----------------HHTGGGTTSCEEECHHHHHHHHHHHHHTSCSCHHHHHHHHHHTTCSTT
T ss_pred             ccchhh-HHHHHHHH-----------------HHhhcCCCCCEEEccHHHHHHHHHHHhccccCchHHHHHHHHhCCCcc
Confidence            344555 99999999                 98876 889999999999999999999  9999999999999999865


Q ss_pred             cc------chhcccchhHHHHHHHHHHHHHhCCC--------c-chhhhhhhhhccCcccchHHHHHhhhhcccccEEec
Q psy2651         158 ET------LLKDYKGIIDQLSKDYKGIIDQLSKS--------P-ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVD  222 (342)
Q Consensus       158 ~~------~~~~~~~~~~~v~~~~~~l~~~l~~~--------~-~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vd  222 (342)
                      +.      .+       +.++..|+.++..+.+.        + .+.+||+||+++++++.++|++.++++|+++++.+|
T Consensus        77 ~~~~~~~~~~-------~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~an~l~~~~~~~l~~~F~~~~~~~y~a~~~~vd  149 (406)
T 3sto_A           77 SSSWNSSEAQ-------QEMKSLYQELNNSLTSEKTFLNEKEENVVRISTGIFVEKTYEVERRFNESIANDSEGELKQVD  149 (406)
T ss_dssp             SSSCCHHHHH-------HHHHHHHHHHHHHHHTCEECC---CEESEEEEEEEEEETTSCCCHHHHHHHHTCSSEEEEEEC
T ss_pred             cccccccCCH-------HHHHHHHHHHHHHHhccCcccccCCCcEEEEEeeeeecCCCccCHHHHHHHHHHhCCeEEEeC
Confidence            32      11       12889999998887553        3 799999999999999999999999999999999999


Q ss_pred             CCCcHHHHHhhchhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeec
Q psy2651         223 FSQPPAAAKEMNDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVK  302 (342)
Q Consensus       223 F~~~~~a~~~IN~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~  302 (342)
                      |.+++++++.||+||+++|+|+|+++++++ ++++|+++|+||+||||.|+++|++.+|++++||..+|++++||||++.
T Consensus       150 F~~~~~a~~~IN~WV~~~T~gkI~~ll~~~-l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~  228 (406)
T 3sto_A          150 FSNRTSATVDINDWVDQQSNGLLEKFFTDD-IPDDTAMILVNVFYFRDFWQSPFEPHYTRKEDFYISPDRQITVDMMTQE  228 (406)
T ss_dssp             TTSHHHHHHHHHHHHHHHTTTCC---------CCSCCEEEEEEEEECEEBSSCCCGGGCEEEEEEEETTEEEEEEEEEEE
T ss_pred             CCChHHHHHHHHHHHHHHhcCcchhhccCC-CCCCceEEEEEeeEEEeecccCCCccCCcCceEECCCCeEEEEeEEEee
Confidence            988888999999999999999999999977 9999999999999999999999999999999999999999999999999


Q ss_pred             ceeeeEEEeCCCCeEEEEEeC-CCcEEEEEeecCCCCCC
Q psy2651         303 DSFYMYEEAGEDGFKMLELPY-GVSISFIIKSQVVPEMG  340 (342)
Q Consensus       303 ~~~f~y~~~~~l~~~vLELPY-~~~~SMlI~~~ILP~~g  340 (342)
                      +. |+|+++++++++|||||| ++++||+|   |||+++
T Consensus       229 ~~-~~y~~~~~~~~~vleLPy~~~~~sm~i---iLP~~~  263 (406)
T 3sto_A          229 GV-MKYGKFEDEGFEIVSKPLNNTRFTFVI---VLPLEK  263 (406)
T ss_dssp             EE-EEEEEETTTTEEEEEEEBSSTTEEEEE---EEESSS
T ss_pred             Cc-eEEEEEcCCCeEEEEEecCCCcEEEEE---EecCCC
Confidence            98 999999999999999999 99999999   899953


No 17 
>2h4r_A MENT, heterochromatin-associated protein MENT; serine protease inhibitor, serpin, hydrolase inhibitor; 2.70A {Gallus gallus} PDB: 2dut_A
Probab=100.00  E-value=2.4e-52  Score=414.15  Aligned_cols=237  Identities=32%  Similarity=0.563  Sum_probs=211.4

Q ss_pred             cccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcccc
Q psy2651          82 SSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETL  160 (342)
Q Consensus        82 ~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~~  160 (342)
                      +++.+ +||++||+                 ++... +++|+||||+||+.+|+|+++||+|+|++||.++||++.....
T Consensus        10 ~~~~~-~Fa~~l~~-----------------~l~~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~   71 (415)
T 2h4r_A           10 SASIG-NFTVDLFN-----------------KLNETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHFTEAVRA   71 (415)
T ss_dssp             HHHHH-HHHHHHHH-----------------HHHTTCSSSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTSCCC---
T ss_pred             HHHHH-HHHHHHHH-----------------HHhccCCCCCEEEchHHHHHHHHHHHhhccchHHHHHHHHhCCCccccc
Confidence            34445 99999999                 88776 7899999999999999999999999999999999999864200


Q ss_pred             ---h-----------hccc---chhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEE
Q psy2651         161 ---L-----------KDYK---GIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGK  220 (342)
Q Consensus       161 ---~-----------~~~~---~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~  220 (342)
                         .           .+++   ...+.++..|+.++..+.+.+   .+.+||+||+++++++.++|.+.++++|+++++.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~  151 (415)
T 2h4r_A           72 ESSSVARPSRGRPKRRRMDPEHEQAENIHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQK  151 (415)
T ss_dssp             ------------------------CHHHHHHHHHHHHHHTCSSCSSEEEEEEEEEEETTSCBCHHHHHHHHHHHSCCCEE
T ss_pred             ccccccccccccccccccccccccHHHHHHHHHHHHHHHhCCCCCcEEEEEEeehhhCCCCcCHHHHHHHHHHhCCeEEE
Confidence               0           0000   000128899999999887643   8999999999999999999999999999999999


Q ss_pred             ecC-CCcHHHHHhhchhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeee
Q psy2651         221 VDF-SQPPAAAKEMNDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLM  299 (342)
Q Consensus       221 vdF-~~~~~a~~~IN~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM  299 (342)
                      +|| .+++++++.||+||+++|+|+|++++++++++++|+++|+||+||||.|+++|++..|++++||..+|+.++||||
T Consensus       152 vdF~~~~~~a~~~IN~WV~~~T~gkI~~ll~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM  231 (415)
T 2h4r_A          152 VNFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVKMM  231 (415)
T ss_dssp             ECTTTCHHHHHHHHHHHHHHHTTTSCCCCSCGGGCCSSCCEEEEEEEEEECBBSSCCCGGGCEEEEEESSSSCEEEEEEE
T ss_pred             ecCCCCHHHHHHHHHHHHHHHhcCchhhhcCccccCCcceEEEEEhheEeceecCCCCcccCeeeEEEecCCcEEEeeEE
Confidence            999 5677799999999999999999999998899999999999999999999999999999999999999999999999


Q ss_pred             eecceeeeEEEeCCCCeEEEEEeC-CCcEEEEEeecCCCCCC
Q psy2651         300 FVKDSFYMYEEAGEDGFKMLELPY-GVSISFIIKSQVVPEMG  340 (342)
Q Consensus       300 ~~~~~~f~y~~~~~l~~~vLELPY-~~~~SMlI~~~ILP~~g  340 (342)
                      ++.+. |+|+++++++++|||||| ++++||+|   |||+++
T Consensus       232 ~~~~~-~~~~~~~~l~~~vleLPY~~~~~sm~i---iLP~~~  269 (415)
T 2h4r_A          232 YMRDT-FPVLIMEKMNFKMIELPYVKRELSMFI---LLPDDI  269 (415)
T ss_dssp             EEEEE-EEEEEETTTTEEEEEEEBGGGSEEEEE---EEESSC
T ss_pred             eecCc-EeEEEeCCCCEEEEEeeCCCCcEEEEE---EecCCC
Confidence            99998 999999999999999999 99999999   899986


No 18 
>1lj5_A Plasminogen activator inhibitor-1; beta-barrell, blood clotting; 1.80A {Homo sapiens} SCOP: e.1.1.1 PDB: 1dvn_A 1c5g_A 1a7c_A* 3q02_A 3q03_A 3r4l_A* 1oc0_A 1b3k_A 3pb1_I 1dvm_A 3eox_A 3cvm_A 1db2_A 9pai_A 3lw2_A 9pai_B
Probab=100.00  E-value=3.7e-52  Score=408.26  Aligned_cols=227  Identities=27%  Similarity=0.519  Sum_probs=209.9

Q ss_pred             cccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcccc
Q psy2651          82 SSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETL  160 (342)
Q Consensus        82 ~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~~  160 (342)
                      .+..+ +||++||+                 ++.+. +++|+||||+||+.+|+|+++||+|+|++||.++||++... .
T Consensus         9 ~~~~~-~Fa~~l~~-----------------~l~~~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~-~   69 (379)
T 1lj5_A            9 AHLAS-DFGVRVFQ-----------------QVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDD-K   69 (379)
T ss_dssp             HHHHH-HHHHHHHH-----------------HHHHHSTTBCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHTSCTTS-T
T ss_pred             HHHHH-HHHHHHHH-----------------HHhhcCCCCCEEEchHHHHHHHHHHHhhccChHHHHHHHHhCCCCCH-H
Confidence            34445 99999999                 88733 78899999999999999999999999999999999998653 2


Q ss_pred             hhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhchhh
Q psy2651         161 LKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMNDWV  237 (342)
Q Consensus       161 ~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~WV  237 (342)
                      +         ++..|+.++..+...+   .+++||+||+++++++.++|.+.++++|+++++.+||.++.++++.||+||
T Consensus        70 ~---------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN~Wv  140 (379)
T 1lj5_A           70 G---------MAPALRHLYKELMGPWNKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWV  140 (379)
T ss_dssp             T---------HHHHHHHHHHHHHCGGGSSEEEEEEEEEEETTSCCCTTHHHHHHHHHSCCCEEECTTSHHHHHHHHHHHH
T ss_pred             H---------HHHHHHHHHHHHhCCCCCcEEEEEEeeeeeCCcchhHHHHHHHHHHhCCEEEEECCCChHHHHHHHHHHH
Confidence            3         8888999988886543   899999999999999999999999999999999999999888899999999


Q ss_pred             hcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEE--EeCC-C
Q psy2651         238 SNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYE--EAGE-D  314 (342)
Q Consensus       238 ~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~--~~~~-l  314 (342)
                      +++|+|+|++++++++++++|+++|+||+||||.|+++|++..|++++||..+|++++||||++.+. |+|+  ++++ +
T Consensus       141 ~~~T~g~I~~l~~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~-~~~~~~~~~~gl  219 (379)
T 1lj5_A          141 KTHTKGMISNLLGKGAVDQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNK-FNYTEFTTPDGH  219 (379)
T ss_dssp             HHTTTTSCCCSSCTTSSCTTCCEEEEEEEEEEEEBSSCCCCCTTCEEEEECTTSCEEEEEEEEEEEE-EEEEEEECTTSC
T ss_pred             HhhcCCccccccCcccCCCccceeeeeeeeecccccCCCCcccccceeEEeCCCeEEEEeEEeeEee-eceeeeEcCCCC
Confidence            9999999999999989999999999999999999999999999999999999999999999999998 9996  7778 8


Q ss_pred             CeEEEEEeC-CCcEEEEEeecCCC-CCC
Q psy2651         315 GFKMLELPY-GVSISFIIKSQVVP-EMG  340 (342)
Q Consensus       315 ~~~vLELPY-~~~~SMlI~~~ILP-~~g  340 (342)
                      +++|||||| ++++||+|   ||| +++
T Consensus       220 ~~~vleLPy~~~~~sm~i---iLP~~~~  244 (379)
T 1lj5_A          220 YYDILELPYHGDTLSMFI---AAPYEKE  244 (379)
T ss_dssp             EEEEEEEEBTTSSEEEEE---EEESSTT
T ss_pred             ceEEEEEecCCCcEEEEE---EEecCCC
Confidence            999999999 99999999   899 764


No 19 
>2ceo_A Thyroxine-binding globulin; transport, serpin, hormone trans thyroxine, disease mutation, glycoprotein; HET: T44; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.4e-52  Score=408.52  Aligned_cols=229  Identities=30%  Similarity=0.493  Sum_probs=209.4

Q ss_pred             ccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCccc
Q psy2651          81 FSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSET  159 (342)
Q Consensus        81 ~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~  159 (342)
                      +++..+ +||++||+                 ++... +++|+||||+||+.+|+|+++||+|+|++||.++||++..+.
T Consensus         6 l~~~~~-~Fa~~l~~-----------------~l~~~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~   67 (379)
T 2ceo_A            6 MSSINA-DFAFNLYR-----------------RFTVETPDKNIFFSPVSISAALVMLSFGACCSTQTEIVETLGFNLTDT   67 (379)
T ss_dssp             HHHHHH-HHHHHHHH-----------------HHHHHSTTSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHTTCCTTTS
T ss_pred             HHHHHH-HHHHHHHH-----------------HHHhcCCCCCEEEchHHHHHHHHHHHhhccchHHHHHHHHhCCCCcCC
Confidence            344555 99999999                 88766 788999999999999999999999999999999999986432


Q ss_pred             chhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhchh
Q psy2651         160 LLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMNDW  236 (342)
Q Consensus       160 ~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~W  236 (342)
                      +..+       ++..|+.++..+...+   .+.+||+||+++++++.++|.+.++++|+++++.+||.++.++++.||+|
T Consensus        68 ~~~~-------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN~W  140 (379)
T 2ceo_A           68 PMVE-------IQHGFQHLICSLNFPKKELELQIGNALFIGKHLKPLAKFLNDVKTLYETEVFSTDFSNISAAKQEINSH  140 (379)
T ss_dssp             CHHH-------HHHHHHHHHHHHSSCCTTEEEEEEEEEEEETTSCBCHHHHHHHHHHHCEEEEEECTTCHHHHHHHHHHH
T ss_pred             CHHH-------HHHHHHHHHHHhhCCCCCcEEEEeEhhhhhCCCChhHHHHHHHHHHhCCeeeecCCCCHHHHHHHHHHH
Confidence            2212       8899999999987643   89999999999999999999999999999999999999888899999999


Q ss_pred             hhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccC-eeecCCCeEEEeeeeecceeeeEEEeCCCC
Q psy2651         237 VSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGP-FYLDDTNSVQVPLMFVKDSFYMYEEAGEDG  315 (342)
Q Consensus       237 V~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~-F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~  315 (342)
                      |+++|+|+|+++++  +++++|+++|+||+||||.|+++|++..|++++ ||..+|++++||||++.+. |+|+++++++
T Consensus       141 V~~~T~gkI~~l~~--~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~~F~~~~~~~~~V~mM~~~~~-~~y~~~~~l~  217 (379)
T 2ceo_A          141 VEMQTKGKVVGLIQ--DLKPNTIMVLVNYIHFKAQWANPFDPSKTEDSSSFLIDKTTTVQVPMMHQMEQ-YYHLVDMELN  217 (379)
T ss_dssp             HHHHTTTSSCCCCC--CCCSSCCEEEEEEEEEEEBBSSCCCGGGCEEEEEEESSSSCEEEEEEEEEEEE-EEEEEETTTT
T ss_pred             HHHHhCCcchhhcc--CCCCCCEEEEEEHhhhhchhcCCCChhhCccCCceEeCCCcEEEEEEEEeeee-EeEEEeCCCC
Confidence            99999999999996  599999999999999999999999999999999 9999999999999999998 9999999999


Q ss_pred             eEEEEEeC-CCcEEEEEeecCCCCCCC
Q psy2651         316 FKMLELPY-GVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       316 ~~vLELPY-~~~~SMlI~~~ILP~~g~  341 (342)
                      ++|||||| ++. ||+|   |||++|.
T Consensus       218 ~~vleLPy~~~~-sm~i---iLP~~~~  240 (379)
T 2ceo_A          218 CTVLQMDYSKNA-LALF---VLPKEGQ  240 (379)
T ss_dssp             EEEEEEEBSSSE-EEEE---EEECTTC
T ss_pred             eEEEEeecCCCe-eEEE---EeeCCCc
Confidence            99999999 765 9999   7999864


No 20 
>2arr_A Plasminogen activator inhibitor-2; serpin, peptide binding, hydrolase inhibitor-PEPT complex; 1.55A {Homo sapiens} PDB: 2arq_A 1jrr_A 1by7_A
Probab=100.00  E-value=1.5e-52  Score=411.40  Aligned_cols=228  Identities=27%  Similarity=0.486  Sum_probs=206.2

Q ss_pred             ccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc-
Q psy2651          81 FSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE-  158 (342)
Q Consensus        81 ~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~-  158 (342)
                      ++++.+ +||++||+                 ++.+. +++|+||||+||+.+|+|+++||+|+|++||.++||++... 
T Consensus         4 l~~~~~-~Fa~~l~~-----------------~l~~~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~   65 (382)
T 2arr_A            4 LCVANT-LFALNLFK-----------------HLAKASPTQNLFLSPWSISSTMAMVYMGSRGSTEDQMASVLQFNEVGA   65 (382)
T ss_dssp             TTHHHH-HHHHHHHH-----------------HHHHHCSSSCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHTTTTC--
T ss_pred             HHHHHH-HHHHHHHH-----------------HHhhcCCCCCEEEchHHHHHHHHHHHhhccCcHHHHHHHHhCCCCccc
Confidence            345556 99999999                 88776 78999999999999999999999999999999999998632 


Q ss_pred             -cchhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecC-CCcHHHHHhh
Q psy2651         159 -TLLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDF-SQPPAAAKEM  233 (342)
Q Consensus       159 -~~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF-~~~~~a~~~I  233 (342)
                       ..+         ++..|+.++..+...+   .+.+||+||+++++++.++|.+.++++|+++++.+|| .+++++++.|
T Consensus        66 ~~~~---------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~I  136 (382)
T 2arr_A           66 AADK---------IHSSFRSLSSAINASTGNYLLESVNKLFGEKSASFREEYIRLCQKYYSSEPQAVDFLECAEEARKKI  136 (382)
T ss_dssp             ---C---------HHHHHHHHHHHHHCCCSSEEEEEEEEEEEETTCCCCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHH
T ss_pred             cHHH---------HHHHHHHHHHHHhCCCCCcEEEeeeehHHhCCCCccHHHHHHHHHHhCCEEEEecCcCcHHHHHHHH
Confidence             123         8899999998886543   8999999999999999999999999999999999999 5667789999


Q ss_pred             chhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCC
Q psy2651         234 NDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGE  313 (342)
Q Consensus       234 N~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~  313 (342)
                      |+||+++|+|+|++++++++++++|+++|+||+||||.|+++|++..|++++||..+|+.++||||++.+. |+|+++++
T Consensus       137 N~wV~~~T~g~I~~l~~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~-~~~~~~~~  215 (382)
T 2arr_A          137 NSWVKTQTKGKIPNLLPEGSVDGDTRMVLVNAVYFKGKWKTPFEKKLNGLFPFRVNSAQRTPVQMMYLREK-LNIGYIED  215 (382)
T ss_dssp             HHHHHHHTTTSSCCCSCTTSSCTTEEEEEEEEEEEEECBSSCCEECC---EEEEEETTEEEEECEEEEEEE-EEEEEEGG
T ss_pred             HHHHHHHhcCchhhhCCCcCCCCcceEEEEEeeEecccccCCCChhhcccceEecCCCceeeeeEEeccCc-EeEEEECC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998 99999999


Q ss_pred             CCeEEEEEeC-CCcEEEEEeecCCCCCC
Q psy2651         314 DGFKMLELPY-GVSISFIIKSQVVPEMG  340 (342)
Q Consensus       314 l~~~vLELPY-~~~~SMlI~~~ILP~~g  340 (342)
                      ++++|||||| + ++||+|   |||+++
T Consensus       216 ~~~~vleLPy~~-~~sm~i---iLP~~~  239 (382)
T 2arr_A          216 LKAQILELPYAG-DVSMFL---LLPDEI  239 (382)
T ss_dssp             GTEEEEEEEBSS-SEEEEE---EEEC--
T ss_pred             CCeEEEEecCCC-cEEEEE---EecCCC
Confidence            9999999999 8 999999   899986


No 21 
>3b9f_I Protein C inhibitor; michaelis complex, acute phase, blood coagulation, cleavage of basic residues, disease mutation; HET: NAG FUC SGN IDS; 1.60A {Homo sapiens} PDB: 2ol2_A*
Probab=100.00  E-value=5.7e-52  Score=409.05  Aligned_cols=230  Identities=25%  Similarity=0.513  Sum_probs=204.2

Q ss_pred             cccccc-cccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCc
Q psy2651          80 SFSSIL-DQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHS  157 (342)
Q Consensus        80 ~~~~~~-~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~  157 (342)
                      ++.++. + +||++||+                 ++... +++|+||||+||+.+|+|+++||+|+|++||.++||++..
T Consensus        28 ~l~~~~~~-~Fa~~L~~-----------------~l~~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~   89 (395)
T 3b9f_I           28 TVAPSSRR-DFTFDLYR-----------------ALASAAPSQNIFFSPVSISMSLAMLSLGAGSSTKMQILEGLGLNLQ   89 (395)
T ss_dssp             ---------CHHHHHHH-----------------HHHHHSTTSCEEECHHHHHHHHHHHGGGCCHHHHHHHHHHTTC---
T ss_pred             HHHHhhHH-HHHHHHHH-----------------HHhccCCCCCEEEcHHHHHHHHHHHHHHcccHHHHHHHHHhCCCCC
Confidence            556677 7 99999999                 88766 7889999999999999999999999999999999999754


Q ss_pred             ccchhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhc
Q psy2651         158 ETLLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMN  234 (342)
Q Consensus       158 ~~~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN  234 (342)
                      +.++.+       ++..|+.++..+...+   .+.+||+||+++++++.++|.+.++++|+++++.+||.++.++++.||
T Consensus        90 ~~~~~~-------i~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN  162 (395)
T 3b9f_I           90 KSSEKE-------LHRGFQQLLQELNQPRDGFQLSLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRDSAGAMKQIN  162 (395)
T ss_dssp             -CCHHH-------HHHHHHHHHHHTTSCCTTCCEEEEEEEEEETTCCBCHHHHHHHHHHHCCEEEEECTTSHHHHHHHHH
T ss_pred             CCCHHH-------HHHHHHHHHHHHhCCCCCceeEEEEEEEEECCCccchHHHHHHHHHhCCEeEEcCCCCHHHHHHHHH
Confidence            322112       8899999999887643   899999999999999999999999999999999999998888999999


Q ss_pred             hhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCC
Q psy2651         235 DWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGED  314 (342)
Q Consensus       235 ~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l  314 (342)
                      +||+++|+|+|+++++  +++++|+++|+||+||||.|+++|++..|++++|+..+|++++||||++.+. |+|++++++
T Consensus       163 ~WV~~~T~gkI~~ll~--~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~-f~y~~~~~l  239 (395)
T 3b9f_I          163 DYVAKQTKGKIVDLLK--NLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQ-YHYLLDRNL  239 (395)
T ss_dssp             HHHHHHTTTSSCCCCS--CCCTTCSEEEEEEEEECCCEEECCCTTTCEEEEEESSSSCEEEEEEEEEEEE-EEEEEETTT
T ss_pred             HHHHHHhCCchhhhcc--CCCCCceEEEEEhheeeccccCCCChhhCeeeEEEeCCCeEEEEEEEEeeee-EeEEEECCC
Confidence            9999999999999996  5999999999999999999999999999999999999999999999999998 999999999


Q ss_pred             CeEEEEEeC-CCcEEEEEeecCCCCCCC
Q psy2651         315 GFKMLELPY-GVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       315 ~~~vLELPY-~~~~SMlI~~~ILP~~g~  341 (342)
                      +++|||||| |+. ||+|   |||+++.
T Consensus       240 ~~~vleLPY~~~~-sm~i---iLP~~~~  263 (395)
T 3b9f_I          240 SCRVVGVPYQGNA-TALF---ILPSEGK  263 (395)
T ss_dssp             TEEEEEEEBSSSC-EEEE---EEECTTC
T ss_pred             CeEEEEEecCCCe-eEEE---EEeCCCC
Confidence            999999999 765 9999   7999864


No 22 
>4afx_A Protein Z dependent protease inhibitor; hydrolase inhibitor, serpin, protein Z dependent inhibitor, coagulation; 2.09A {Homo sapiens} PDB: 4aju_A 3h5c_A* 3f1s_A*
Probab=100.00  E-value=3e-52  Score=409.77  Aligned_cols=226  Identities=26%  Similarity=0.494  Sum_probs=208.3

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCC--
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKH--  156 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~--  156 (342)
                      .++.+.+ +||++||+                 ++... ++ |+||||+||+.+|+|+++||+|+|++||.++||++.  
T Consensus        53 ~l~~~~~-~Fa~~L~~-----------------~l~~~~~~-Niv~SP~SI~~aLaml~~GA~G~T~~ql~~~L~~~~~~  113 (387)
T 4afx_A           53 QLAKETS-NFGFSLLR-----------------KISMRHDG-NMVFSPFGMSLAMTGLMLGATGPTETQIKRGLHLQALK  113 (387)
T ss_dssp             HHHHHHH-HHHHHHHH-----------------HHHHHCCS-CEEECHHHHHHHHHHHHTTCCTHHHHHHHHHTTCTTCS
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHhhcCCC-CEEEChHHHHHHHHHHHhhccchHHHHHHHHhCCCccc
Confidence            4555666 99999999                 88776 55 999999999999999999999999999999999986  


Q ss_pred             -cccchhcccchhHHHHHHHHHHHHHhCCCc--chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhh
Q psy2651         157 -SETLLKDYKGIIDQLSKDYKGIIDQLSKSP--ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEM  233 (342)
Q Consensus       157 -~~~~~~~~~~~~~~v~~~~~~l~~~l~~~~--~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~I  233 (342)
                       .+..+         ++..|+.++..+...+  .+.+||+||+++++++.++|++.++++|+++++.+||.++.++++.|
T Consensus       114 ~~~~~~---------~~~~~~~l~~~l~~~~~~~l~~an~lf~~~~~~l~~~F~~~~~~~y~a~~~~vdF~~~~~a~~~I  184 (387)
T 4afx_A          114 PTKPGL---------LPSLFKGLRETLSRNLELGLTQGSFAFIHKDFDVKETFFNLSKRYFDTECVPMNFRNASQAKRLM  184 (387)
T ss_dssp             CCCTTH---------HHHHHHHHHHHHHHCGGGCEEEEEEEEEETTCCBCHHHHHHHHHHHCCEEEEECTTSHHHHHHHH
T ss_pred             cCCHHH---------HHHHHHHHHHHhccCCCceEEEEEEEeecCCCchhHHHHHHHHHHhccceEecCCCChHHHHHHH
Confidence             22123         8889999888876222  79999999999999999999999999999999999999988899999


Q ss_pred             chhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCC
Q psy2651         234 NDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGE  313 (342)
Q Consensus       234 N~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~  313 (342)
                      |+||+++|+|+|++++  ++++++|+++|+|||||||.|+++|++..|++++||..+|++++||||++.+. |+|+++++
T Consensus       185 N~WV~~~T~gkI~~ll--~~l~~~t~lvLvNAiyFKg~W~~~F~~~~T~~~~F~~~~g~~v~V~mM~~~~~-f~y~~~~~  261 (387)
T 4afx_A          185 NHYINKETRGKIPKLF--DEINPETKLILVDYILFKGKWLTPFDPVFTEVDTFHLDKYKTIKVPMMYGAGK-FASTFDKN  261 (387)
T ss_dssp             HHHHHHHTTTSSSCSC--CCCCTTEEEEEEEEEEEEEEBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEE-EEEEEETT
T ss_pred             HHHHHHhcCCCccccc--cCCCCCceEEEEeeeEEEeecccCCCcccceeeeeecCCCcEEEEEEEEeeee-EeEEEecC
Confidence            9999999999999999  58999999999999999999999999999999999999999999999999998 99999999


Q ss_pred             CCeEEEEEeC-CCcEEEEEeecCCCCCC
Q psy2651         314 DGFKMLELPY-GVSISFIIKSQVVPEMG  340 (342)
Q Consensus       314 l~~~vLELPY-~~~~SMlI~~~ILP~~g  340 (342)
                      ++++|||||| + ++||+|   |||+++
T Consensus       262 l~~~vleLPY~~-~~sM~i---iLP~~~  285 (387)
T 4afx_A          262 FRCHVLKLPYQG-NATMLV---VLMEKM  285 (387)
T ss_dssp             TTEEEEEEEBTT-SEEEEE---EEESCC
T ss_pred             CceEEEEEEcCC-cEEEEE---EecCCC
Confidence            9999999999 8 999999   899984


No 23 
>2vdx_A Corticosteroid-binding globulin; transport protein, cortisol binding globulin, glycoprotein, lipid-binding, disease mutation, CBG, SERP cleaved; 1.84A {Homo sapiens} PDB: 2vdy_A*
Probab=100.00  E-value=3.6e-52  Score=407.54  Aligned_cols=230  Identities=29%  Similarity=0.542  Sum_probs=208.6

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      ++++..+ +||++||+                 ++... +++|+||||+||+.+|+|+++||+|+|++||.++||++...
T Consensus         6 ~l~~~~~-~Fa~~l~~-----------------~l~~~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~   67 (373)
T 2vdx_A            6 GLASANV-DFAFSLYK-----------------HLVALSPKKNIFISPVSISMALAMLSLGTCGHTRAQLLQGLGFNLTE   67 (373)
T ss_dssp             CHHHHHH-HHHHHHHH-----------------HHHHHCSSSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTTT
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHHhcCCCCCEEEccHHHHHHHHHHHhhccchHHHHHHHHhCCCCCC
Confidence            3445556 99999999                 88765 78899999999999999999999999999999999997543


Q ss_pred             cchhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhch
Q psy2651         159 TLLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMND  235 (342)
Q Consensus       159 ~~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~  235 (342)
                      .+..+       ++..|+.++..+...+   .+.+||+||+++++++.++|.+.++++|+++++.+||.++.++++.||+
T Consensus        68 ~~~~~-------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN~  140 (373)
T 2vdx_A           68 RSETE-------IHQGFQHLHQLFAKSDTSLEMTMGNALFLDGSLELLESFSADIKHYYESEVLAMNFQDWATASRQINS  140 (373)
T ss_dssp             SCHHH-------HHHHHHHHHHHHHSCCSSCEEEEEEEEEEETTCCCCHHHHHHHHHHHCCEEEEECTTSHHHHHHHHHH
T ss_pred             CCHHH-------HHHHHHHHHHHhhccCCcccceeEEEEEEECCCChHHHHHHHHHHHhCCeeEeecCcchHHHHHHHHH
Confidence            21212       8899999998886543   8999999999999999999999999999999999999988889999999


Q ss_pred             hhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCC
Q psy2651         236 WVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDG  315 (342)
Q Consensus       236 WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~  315 (342)
                      ||+++|+|+|+++++  +++++|+++|+||+||||.|+++|++..|++++||..+|++++||||++.+. |+|+++++++
T Consensus       141 WV~~~T~gkI~~l~~--~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~-~~y~~~~~l~  217 (373)
T 2vdx_A          141 YVKNKTQGKIVDLFS--GLDSPAILVLVNYIFFKGTWTQPFDLASTREENFYVDETTVVKVPMMLQSST-ISYLHDSELP  217 (373)
T ss_dssp             HHHHHTTTCSCCSSC--C-CCCCSEEEEEEEEEEEEBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEE-EEEEECSSSS
T ss_pred             HHHHHhcCchhhhcc--CCCCCCeEEEEEHHhhhhhhhCcCCccccccceEEeCCCcEEEEEEEEeeee-EeeEEeCCCC
Confidence            999999999999996  5999999999999999999999999999999999999999999999999998 9999999999


Q ss_pred             eEEEEEeC-CCcEEEEEeecCCCCCCC
Q psy2651         316 FKMLELPY-GVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       316 ~~vLELPY-~~~~SMlI~~~ILP~~g~  341 (342)
                      ++|||||| ++ .||+|   |||++|.
T Consensus       218 ~~vleLPy~~~-~sm~i---iLP~~~~  240 (373)
T 2vdx_A          218 CQLVQMNYVGN-GTVFF---ILPDKGK  240 (373)
T ss_dssp             EEEEEEEBSSS-EEEEE---EEECTTC
T ss_pred             eEEEEEecCCC-eEEEE---EecCCCC
Confidence            99999999 64 79999   7999874


No 24 
>1sek_A Serpin K; serine protease inhibitor, protease; 2.10A {Manduca sexta} SCOP: e.1.1.1 PDB: 1k9o_I
Probab=100.00  E-value=1.6e-52  Score=410.68  Aligned_cols=226  Identities=31%  Similarity=0.564  Sum_probs=207.9

Q ss_pred             cccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcccc
Q psy2651          82 SSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETL  160 (342)
Q Consensus        82 ~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~~  160 (342)
                      .+..+ +||++||+                 ++.+. +++|+||||+||+.+|+|+++||+|+|++||.++||++..+  
T Consensus        12 ~~~~~-~Fa~~l~~-----------------~l~~~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~--   71 (378)
T 1sek_A           12 RESND-QFTAQMFS-----------------EVVKANPGQNVVLSAFSVLPPLGQLALASVGESHDELLRALALPNDN--   71 (378)
T ss_dssp             HHHHH-HHHHHHHH-----------------HHHHTSTTSCEEECSTTTHHHHHHHHHHCCHHHHHHHHHHHTCCCHH--
T ss_pred             HHHHH-HHHHHHHH-----------------HHHhcCCCCCEEEcHHHHHHHHHHHHhhcCCcHHHHHHHHhCCCCCc--
Confidence            34455 99999999                 88876 78899999999999999999999999999999999998643  


Q ss_pred             hhcccchhHHHHHHHHHHHHHhCCCc--chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhchhhh
Q psy2651         161 LKDYKGIIDQLSKDYKGIIDQLSKSP--ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMNDWVS  238 (342)
Q Consensus       161 ~~~~~~~~~~v~~~~~~l~~~l~~~~--~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~WV~  238 (342)
                      .         ....++.+...+...+  .+.+||+||+++++++.++|.+.++++|+++++.+||.++.++++.||+||+
T Consensus        72 ~---------~~~~~~~l~~~l~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN~WV~  142 (378)
T 1sek_A           72 V---------TKDVFADLNRGVRAVKGVDLKMASKIYVAKGLELNDDFAAVSRDVFGSEVQNVDFVKSVEAAGAINKWVE  142 (378)
T ss_dssp             H---------HHHHHHHHHHTCSCCTTEEEEEEEEEEEETTSCBCHHHHHHHHHTTCCEEEEECGGGHHHHHHHHHHHHH
T ss_pred             h---------HHHHHHHHHHHHhccCCCeEEeeeehhhhCCCCHhHHHHHHHHHHhCCeeEeeCCcCHHHHHHHHHHHHH
Confidence            1         1145677777776543  7999999999999999999999999999999999999888889999999999


Q ss_pred             cccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCCeEE
Q psy2651         239 NHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDGFKM  318 (342)
Q Consensus       239 ~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~~~v  318 (342)
                      ++|+|+|++++++++++++|+++|+||+||||.|+++|++..|++++||..+|++++||||++.+. |+|+++++++++|
T Consensus       143 ~~T~gkI~~ll~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~-~~y~~~~~l~~~v  221 (378)
T 1sek_A          143 DQTNNRIKNLVDPDALDETTRSVLVNAIYFKGSWKDKFNKERTMDRDFHVSKDKTIKVPTMIGKKD-VRYADVPELDAKM  221 (378)
T ss_dssp             HHTTTSSCCCSCGGGCCTTCCEEEEEEEEEEECBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEE-EEEEEEGGGTEEE
T ss_pred             HHhCCcccccCCcccCCCCCeEEEEEeeEEeccccCCCCCCCcccceEEeCCCEEEEeeEEEeece-EeEEEeCCCCeEE
Confidence            999999999999999999999999999999999999999999999999999999999999999998 9999999999999


Q ss_pred             EEEeC-CCcEEEEEeecCCCCCC
Q psy2651         319 LELPY-GVSISFIIKSQVVPEMG  340 (342)
Q Consensus       319 LELPY-~~~~SMlI~~~ILP~~g  340 (342)
                      ||||| |+++||+|   |||+++
T Consensus       222 leLPy~~~~~sm~i---iLP~~~  241 (378)
T 1sek_A          222 IEMSYEGDQASMII---ILPNQV  241 (378)
T ss_dssp             EEEEBGGGSEEEEE---EEESST
T ss_pred             EEEECCCCcEEEEE---EEeCCC
Confidence            99999 99999999   899974


No 25 
>4dy0_A GLIA-derived nexin; serpin, protease inhibitor, thrombin, cell surface, hydrolas inhibitor; HET: IDS SGN; 2.35A {Homo sapiens} PDB: 4dy7_C
Probab=100.00  E-value=3.8e-52  Score=408.18  Aligned_cols=225  Identities=30%  Similarity=0.528  Sum_probs=205.7

Q ss_pred             ccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcccch
Q psy2651          83 SILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLL  161 (342)
Q Consensus        83 ~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~~~  161 (342)
                      +..+ +||++||+                 ++++. +++|+||||+||+.+|+|+++||+|+|++||.++||++..+   
T Consensus        10 ~~~~-~f~~~L~~-----------------~l~~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~---   68 (379)
T 4dy0_A           10 ELGS-NTGIQVFN-----------------QIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLAMVMRYGVNG---   68 (379)
T ss_dssp             HHHH-HHHHHHHH-----------------HHHHHCTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHHTSCSTT---
T ss_pred             HHhh-HHHHHHHH-----------------HHHhhCcCCcEEECHHHHHHHHHHHHHHcChHHHHHHHHHhCCChhH---
Confidence            3334 99999999                 99877 89999999999999999999999999999999999997655   


Q ss_pred             hcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhchhhh
Q psy2651         162 KDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMNDWVS  238 (342)
Q Consensus       162 ~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~WV~  238 (342)
                               ++..++.+...+....   .+.+||+||+++++++.++|++.++++|+++++.+||.++.++++.||+||+
T Consensus        69 ---------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~~~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN~wV~  139 (379)
T 4dy0_A           69 ---------VGKILKKINKAIVSKKNKDIVTVANAVFVKNASEIEVPFVTRNKDVFQCEVRNVNFEDPASACDSINAWVK  139 (379)
T ss_dssp             ---------THHHHHHHHHHHHCGGGSSCCEEEEEEEESCTTSSCHHHHHHHHHHHCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ---------HHHHHHHHHHHHhccCCCceeeeeeeeeeEccccccchhhhhhhhcCCcEEEEeccCChHHHHHHHHHHHH
Confidence                     5666777776665433   7999999999999999999999999999999999999999889999999999


Q ss_pred             cccCCccccCCCCCCCCcc-cceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeC---CC
Q psy2651         239 NHTNDKIKDLIKADSLDAS-TKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAG---ED  314 (342)
Q Consensus       239 ~~T~g~I~~ll~~~~i~~~-t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~---~l  314 (342)
                      ++|+|+|+++++++++++. |+++|+||+||||.|+++|++.+|++++||..+|++++||||++.+. ++|+++.   ++
T Consensus       140 ~~T~g~I~~ll~~~~~~~~~T~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~v~mM~~~~~-~~~~~~~~~~~l  218 (379)
T 4dy0_A          140 NETRDMIDNLLSPDLIDGVLTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSV-FRCGSTSAPNDL  218 (379)
T ss_dssp             HHTTTCCCCCCCGGGCCTTTCCEEEEEEEEECCCBSSCCCGGGCEEEEEECTTSCEEEEEEEEEEEE-EEEEEEECTTSC
T ss_pred             HhcCCcccccCCcccCCcccceEEEEEEEEEEeeecCCCchhhCeeeeEEeCCCceEEeeeeEeeee-eccccccccccc
Confidence            9999999999999888764 99999999999999999999999999999999999999999999998 9998764   67


Q ss_pred             CeEEEEEeC-CCcEEEEEeecCCCCCCC
Q psy2651         315 GFKMLELPY-GVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       315 ~~~vLELPY-~~~~SMlI~~~ILP~~g~  341 (342)
                      ++++||||| |+++||+|   |||++++
T Consensus       219 ~~~vl~LPy~~~~~sm~i---iLP~~~~  243 (379)
T 4dy0_A          219 WYNFIELPYHGESISMLI---ALPTESS  243 (379)
T ss_dssp             EEEEEEEEBTTSSEEEEE---EEESSTT
T ss_pred             ceEEEEeccCCCceEEEE---EecCccc
Confidence            899999999 99999999   7987653


No 26 
>1wz9_A Maspin precursor; serpin, tumor suppressor, serpinb5, signaling protein; HET: CME; 2.10A {Homo sapiens} PDB: 1xu8_A 1xqg_A 1xqj_A
Probab=100.00  E-value=2.1e-52  Score=409.46  Aligned_cols=222  Identities=25%  Similarity=0.466  Sum_probs=207.2

Q ss_pred             ccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcccch
Q psy2651          83 SILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLL  161 (342)
Q Consensus        83 ~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~~~  161 (342)
                      ++.+ +||++||+                 ++.+. +++|+||||+||+.+|+|+++||+|+|++||.++||++...  +
T Consensus         6 ~~~~-~Fa~~l~~-----------------~l~~~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~--~   65 (375)
T 1wz9_A            6 LANS-AFAVDLFK-----------------QLCEKEPLGNVLFSPICLSTSLSLAQVGAKGDTANEIGQVLHFENVK--D   65 (375)
T ss_dssp             HHHH-HHHHHHHH-----------------HHHHHCTTSCCEECHHHHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS--C
T ss_pred             HHHH-HHHHHHHH-----------------HHhccCCCCCEEECHHHHHHHHHHHHhhccCcHHHHHHHHhCCCCHH--H
Confidence            3445 99999999                 88775 78999999999999999999999999999999999997543  3


Q ss_pred             hcccchhHHHHHHHHHHHHHhCCC--c-chhhhhhhhhccCcccchHHHHHhhhhcccccEEecC-CCcHHHHHhhchhh
Q psy2651         162 KDYKGIIDQLSKDYKGIIDQLSKS--P-ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDF-SQPPAAAKEMNDWV  237 (342)
Q Consensus       162 ~~~~~~~~~v~~~~~~l~~~l~~~--~-~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF-~~~~~a~~~IN~WV  237 (342)
                               ++..|+.++..+...  + .+++||+||+++++++.++|.+.++++|+++++.+|| .+++++++.||+||
T Consensus        66 ---------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~wV  136 (375)
T 1wz9_A           66 ---------VPFGFQTVTSDVNKLSSFYSLKLIKRLYVDKSLNLSTEFISSTKRPYAKELETVDFKDKLEETKGQINNSI  136 (375)
T ss_dssp             ---------HHHHHHHHHHHHHHHTTTSEEEEEEEEEEEGGGCCCHHHHHHHTTTTTTTEEEECTTTCHHHHHHHHHHHH
T ss_pred             ---------HHHHHHHHHHHhhcCCCCcEEEEeeeeeeeCCcchhHHHHHHHHHHhCCEEEEecCCCCHHHHHHHHHHHH
Confidence                     888899888877543  2 8999999999999999999999999999999999999 57778999999999


Q ss_pred             hcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCCeE
Q psy2651         238 SNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDGFK  317 (342)
Q Consensus       238 ~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~~~  317 (342)
                      +++|+|+|++++++++++++|+++|+||+||||.|+++|++..|++++||..+|+.++||||++.+. |+|+++++++++
T Consensus       137 ~~~T~g~I~~l~~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~-~~~~~~~~~~~~  215 (375)
T 1wz9_A          137 KDLTDGHFENILADNSVNDQTKILVVNAAYFVGKWMKKFPESETKECPFRLNKTDTKPVQMMNMEAT-FCMGNIDSINCK  215 (375)
T ss_dssp             HHHTTTSCSCTTTTSCCCTTCCEEEEEEEEEECCBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEE-EEEEEETTTTEE
T ss_pred             HHHhcCchhhccCcccCCccchhhheeheeeecccCCCCCccCceeeeEEeCCCeEEEEEEEEeeee-EeeEEeCCcceE
Confidence            9999999999999999999999999999999999999999999999999999999999999999998 999999999999


Q ss_pred             EEEEeC-CCcEEEEEeecCCC
Q psy2651         318 MLELPY-GVSISFIIKSQVVP  337 (342)
Q Consensus       318 vLELPY-~~~~SMlI~~~ILP  337 (342)
                      |||||| ++++||+|   |||
T Consensus       216 vleLPy~~~~~sm~i---iLP  233 (375)
T 1wz9_A          216 IIELPFQNKHLSMFI---LLP  233 (375)
T ss_dssp             EEEEEBGGGSEEEEE---EEE
T ss_pred             EEEeecCCCeEEEEE---Eec
Confidence            999999 99999999   899


No 27 
>1yxa_A Serine (OR cysteine) proteinase inhibitor, clade 3N; serpin, antichymotrypsin, protease inhibitor, reactive centr plasma, hydrolase inhibitor; 2.10A {Mus musculus}
Probab=100.00  E-value=8.7e-52  Score=408.11  Aligned_cols=230  Identities=32%  Similarity=0.552  Sum_probs=210.0

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      ++.+..+ +||++||+                 ++... +++|+||||+||+.+|+|+++||+|+|++||.++||++...
T Consensus        26 ~l~~~~~-~Fa~~l~~-----------------~l~~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~   87 (398)
T 1yxa_A           26 TLASINT-DFAFSLYK-----------------ELVLKNPDTNIVFSPLSISAALALVSLGAKGNTLEEILEGLKFNLTE   87 (398)
T ss_dssp             -CHHHHH-HHHHHHHH-----------------HHHHHSTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTTT
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHHhcCCCCCEEEchHHHHHHHHHHHhhcccHHHHHHHHHhCCCccc
Confidence            4555666 99999999                 88766 78899999999999999999999999999999999997543


Q ss_pred             cchhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhch
Q psy2651         159 TLLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMND  235 (342)
Q Consensus       159 ~~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~  235 (342)
                      .++.+       ++..|+.++..+...+   .+.+||+||+++++++.++|.+.++++|+++++.+||.+++++++.||+
T Consensus        88 ~~~~~-------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN~  160 (398)
T 1yxa_A           88 TSEAD-------IHQGFGHLLQRLNQPKDQVQISTGSALFIEKRQQILTEFQEKAKTLYQAEAFTADFQQPRQAKKLIND  160 (398)
T ss_dssp             SCHHH-------HHHHHHHHHHHHSSCBTTBEEEEEEEEEEETTSCCCHHHHHHHHHHHSCEEEEECTTSHHHHHHHHHH
T ss_pred             CCHHH-------HHHHHHHHHHHHhCCCCCceeeeeeEEEEeCCCchhHHHHHHHHHHhCCceeecCCCCHHHHHHHHHH
Confidence            21212       8899999999887643   8999999999999999999999999999999999999988888999999


Q ss_pred             hhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecc-eeeeEEEeCCC
Q psy2651         236 WVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKD-SFYMYEEAGED  314 (342)
Q Consensus       236 WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~-~~f~y~~~~~l  314 (342)
                      ||+++|+|+|+++++  +++++|+++|+||+||||.|+++|++..|++++||..+|++++||||++.+ . |+|++++++
T Consensus       161 WV~~~T~gkI~~ll~--~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~-~~y~~~~~l  237 (398)
T 1yxa_A          161 YVRKQTQGMIKELVS--DLDKRTLMVLVNYIYFKAKWKVPFDPLDTFKSEFYCGKRRPVIVPMMSMEDLT-TPYFRDEEL  237 (398)
T ss_dssp             HHHHHTTTSSSCCCC--CCCTTCCEEEEEEEEEECBBSSCCCGGGCEEEEECCCCSSCEEEEEEEEEEEE-EEEEEETTT
T ss_pred             HHHHHhcCchhhhhh--ccCCCcEEEEEEHHhhhhhhhCCCCcccCeeeEEEeCCCeEEEEEEEEEcCce-EEEEEeCCC
Confidence            999999999999996  599999999999999999999999999999999999999999999999999 8 999999999


Q ss_pred             CeEEEEEeC-CCcEEEEEeecCCCCCCC
Q psy2651         315 GFKMLELPY-GVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       315 ~~~vLELPY-~~~~SMlI~~~ILP~~g~  341 (342)
                      +++|||||| ++ .||+|   |||++|+
T Consensus       238 ~~~vleLPY~~~-~sm~i---iLP~~~~  261 (398)
T 1yxa_A          238 SCTVVELKYTGN-ASALF---ILPDQGR  261 (398)
T ss_dssp             TEEEEEEEBSSS-EEEEE---EEECTTC
T ss_pred             CeEEEEEecCCC-eeEEE---EecCcCc
Confidence            999999999 76 49999   7999875


No 28 
>3f1s_A Protein Z-dependent protease inhibitor; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} PDB: 3h5c_A*
Probab=100.00  E-value=9.3e-52  Score=406.23  Aligned_cols=227  Identities=23%  Similarity=0.411  Sum_probs=208.7

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCc-
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHS-  157 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~-  157 (342)
                      ++.+..+ +||++||+                 ++.+. ++ |+||||+||+.+|+|+++||+|+|++||.++||++.. 
T Consensus        15 ~l~~~~~-~Fa~~l~~-----------------~l~~~~~~-Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~   75 (385)
T 3f1s_A           15 QLAKETS-NFGFSLLR-----------------KISMRHDG-NMVFSPFGMSLAMTGLMLGATGPTETQIKRGLHLQALK   75 (385)
T ss_dssp             HHHHHHH-HHHHHHHH-----------------HHHHHCCS-CEEECHHHHHHHHHHHTTTCCTHHHHHHHHHTTCTTCC
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHhhCCCC-cEEEchHHHHHHHHHHHHhcchHHHHHHHHhcCCCCCc
Confidence            3445556 99999999                 88766 56 9999999999999999999999999999999999863 


Q ss_pred             -ccchhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhh
Q psy2651         158 -ETLLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEM  233 (342)
Q Consensus       158 -~~~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~I  233 (342)
                       +..+         ++..|+.++..+...+   .+.+||+||+++++++.++|.+.++++|+++++.+||.++.++++.|
T Consensus        76 ~~~~~---------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~I  146 (385)
T 3f1s_A           76 PTKPG---------LLPSLFKGLRETLSRNLELGLTQGSFAFIHKDFDVKETFFNLSKRYFDTECVPMNFRNASQAKRLM  146 (385)
T ss_dssp             CSSTT---------HHHHHHHHHHHHHHHCSSSCEEEEEEEEEETTSCBCHHHHHHHHHHHCEEEEEECCSSHHHHHHHH
T ss_pred             CCHHH---------HHHHHHHHHHHhhcCCCCcEEEEEEEEEEECCCchhHHHHHHHHHHhCCeeEEeCCCChHHHHHHH
Confidence             2123         8899999888875432   89999999999999999999999999999999999999888899999


Q ss_pred             chhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCC
Q psy2651         234 NDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGE  313 (342)
Q Consensus       234 N~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~  313 (342)
                      |+||+++|+|+|++++  ++++++|+++|+||+||||.|+++|++..|++++||..+|++++||||++.+. |+|+++++
T Consensus       147 N~WV~~~T~gkI~~l~--~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~-~~y~~~~~  223 (385)
T 3f1s_A          147 NHYINKETRGKIPKLF--DEINPETKLILVDYILFKGKWLTPFDPVFTEVDTFHLDKYKTIKVPMMYGAGK-FASTFDKN  223 (385)
T ss_dssp             HHHHHHHTTTSSSCCC--SCCCTTCCEEEEEEEEEECCBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEE-EEEEEETT
T ss_pred             HHHHHHHhcCchhhHh--hccCCCCeEEEEEhhhccchhcCCCCccCccceEEEECCCEEEEEEEEeccCc-ccEEEeCC
Confidence            9999999999999999  58999999999999999999999999999999999999999999999999998 99999999


Q ss_pred             CCeEEEEEeCCCcEEEEEeecCCCCCC
Q psy2651         314 DGFKMLELPYGVSISFIIKSQVVPEMG  340 (342)
Q Consensus       314 l~~~vLELPY~~~~SMlI~~~ILP~~g  340 (342)
                      ++++||||||++++||+|   |||+++
T Consensus       224 l~~~vleLPy~~~~sm~i---iLP~~~  247 (385)
T 3f1s_A          224 FRCHVLKLPYQGNATMLV---VLMEKM  247 (385)
T ss_dssp             TTEEEEEEEETTTEEEEE---EEECTT
T ss_pred             CCeEEEEecCCCcEEEEE---EeCCCC
Confidence            999999999988899999   899974


No 29 
>4ajt_A Protein Z-dependent protease inhibitor; blood clotting, ZPI; 2.50A {Mus musculus}
Probab=100.00  E-value=1.5e-51  Score=409.28  Aligned_cols=226  Identities=26%  Similarity=0.490  Sum_probs=207.8

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhccCCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCC---
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKH---  156 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~---  156 (342)
                      .++++.+ +||++||+                 +++....+|+||||+||+.+|+|+++||+|+|++||.++||++.   
T Consensus        57 ~l~~~~~-~Fa~~L~~-----------------~l~~~~~~Niv~SP~SI~~aLaml~~GA~G~T~~el~~~L~~~~~~~  118 (427)
T 4ajt_A           57 QLSNETS-SFGFNLLR-----------------KISMRHDGNVIFSPFGLSVAMVNLMLGTKGETKVQIENGLNLQALSQ  118 (427)
T ss_dssp             HHHHHHH-HHHHHHHH-----------------HHHHHCCSCEEECHHHHHHHHHHHHHHCCTHHHHHHHHHHTCHHHHT
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHHhcCCCCEEEchHHHHHHHHHHHhhcCchHHHHHHHHhCCCcccc
Confidence            5566667 99999999                 88766334999999999999999999999999999999999973   


Q ss_pred             cccchhcccchhHHHHHHHHHHHHHhCCCc--chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhc
Q psy2651         157 SETLLKDYKGIIDQLSKDYKGIIDQLSKSP--ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMN  234 (342)
Q Consensus       157 ~~~~~~~~~~~~~~v~~~~~~l~~~l~~~~--~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN  234 (342)
                      .+..+         ++..|+.++..+...+  .+.+||+||++++++++++|++.++++|+++++.+||.++..+++.||
T Consensus       119 ~~~~~---------i~~~f~~l~~~l~~~~~~~L~~an~lf~~~~~~l~~~F~~~~~~~y~a~~~~vdF~~~~~a~~~IN  189 (427)
T 4ajt_A          119 AGPLI---------LPALFKKVKETFSSNRDLGLSQGSFAFIHKDFDIKETYFNLSKKYFDIEYVSINFQNSSQARGLIN  189 (427)
T ss_dssp             SCTTH---------HHHHHHHHHHHHHTCTTSCEEEEEEEEEETTSCCCHHHHHHHHHHSCCCEEEECTTSHHHHHHHHH
T ss_pred             CCHHH---------HHHHHHHHHHHhCCCCCceehhhhHHHHccCCchhHHHHHHHHHhhcceeEEcCCCChHHHHHHHH
Confidence            12123         8899999988876322  899999999999999999999999999999999999988888999999


Q ss_pred             hhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCC
Q psy2651         235 DWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGED  314 (342)
Q Consensus       235 ~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l  314 (342)
                      +||+++|+|+|++++  ++++++|+++|+|||||||.|+++|++.+|++++||..+|++++||||++.+. |+|++++++
T Consensus       190 ~WV~~~T~gkI~~ll--~~l~~~T~lvLvNAiyFKg~W~~~F~~~~T~~~~F~~~~g~~v~V~mM~~~~~-f~~~~~~~l  266 (427)
T 4ajt_A          190 HCIVKETEGKIPKLF--DEINPETKLILVDYVLFKGKWLTPFDPSFTEADTFHLDKYRAIKVPMMYREGN-FTSTFDKKF  266 (427)
T ss_dssp             HHHHHHTTTSSCSCC--SCCCTTCCEEEEEEEEECCCBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEE-EEEEEETTT
T ss_pred             HHHHHhhCCcccccc--cCCCCcceeEEeeeeeeeeeecCCCChhhccccceeccCCCEEEEEEEEecCc-eeEEEecCC
Confidence            999999999999999  58999999999999999999999999999999999999999999999999998 999999999


Q ss_pred             CeEEEEEeC-CCcEEEEEeecCCCCC
Q psy2651         315 GFKMLELPY-GVSISFIIKSQVVPEM  339 (342)
Q Consensus       315 ~~~vLELPY-~~~~SMlI~~~ILP~~  339 (342)
                      +++|||||| + ++||+|   |||++
T Consensus       267 ~~~vleLPY~~-~~sm~i---iLP~~  288 (427)
T 4ajt_A          267 RCHILKLPYQG-NATMLV---VLMEK  288 (427)
T ss_dssp             TEEEEEEEEGG-GEEEEE---EEECT
T ss_pred             ceEEEEEEcCC-CeEEEE---EecCC
Confidence            999999999 8 999999   89998


No 30 
>3pzf_A Serpin 2; protease inhibitor, melanization, hydrolase inhibito; 1.75A {Anopheles gambiae}
Probab=100.00  E-value=4.2e-51  Score=402.97  Aligned_cols=225  Identities=27%  Similarity=0.504  Sum_probs=205.1

Q ss_pred             ccccccccccccccccCCcchhhhhhhhhhhhhccCCCCEEEChhhHHHHHHHHHccCChhH------HHHHHHHcCCCC
Q psy2651          83 SILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAANKKENAIISPFSLHVVLGLASFGAAGST------AEAMMKGLRIKH  156 (342)
Q Consensus        83 ~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~~~~Niv~SP~sI~~aLamL~~GA~G~T------~~qL~~~Lgl~~  156 (342)
                      +..+ +||++||+                 ++++.+++|+||||+||+.+|+|+++||+|+|      .+|+.++|++..
T Consensus        20 ~~~~-~Fa~~L~k-----------------~l~~~~~~Ni~~SP~SI~~aLaml~~GA~G~T~~~~~~~~~~l~~l~~~~   81 (397)
T 3pzf_A           20 QRQN-EFDLMFVK-----------------EIFKNHNSNVVLSPFSVKILLTLIYEASDTSFGNAVSNTKRELSSVIQND   81 (397)
T ss_dssp             CCCC-HHHHHHHH-----------------HHHHTCSSCEEECHHHHHHHHHHHHHHSGGGCC-CCCHHHHHGGGGSSTT
T ss_pred             chhh-HHHHHHHH-----------------HHHhCCCCCEEEchHHHHHHHHHHHhhcCCCCccChHHHHHHHHHcCCCC
Confidence            3444 99999999                 88765788999999999999999999999998      777777777654


Q ss_pred             cccchhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhh
Q psy2651         157 SETLLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEM  233 (342)
Q Consensus       157 ~~~~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~I  233 (342)
                      .. .+         ++..|++++..+...+   .+.+||+||+++++++.++|++.++++|+++++.+||.+++.+++.|
T Consensus        82 ~~-~~---------~~~~~~~ll~~l~~~~~~~~l~~an~lf~~~~~~l~~~F~~~~~~~y~a~~~~vdF~~~~~a~~~I  151 (397)
T 3pzf_A           82 NI-DH---------TRSYYKQLLESAQQDNKDYDLNIATNFFVDDFIEVINKYQQIANTHYHAMLEKVSYSNPTQTAATI  151 (397)
T ss_dssp             CH-HH---------HHHHHHHHHHHHHCCCSSCEEEEEEEEEEETTCCBCHHHHHHHHHHHCEEEEEECTTSHHHHHHHH
T ss_pred             ch-HH---------HHHHHHHHHHHHhcCCCCcEEEEeeeeeEeCCCccchHHHHHHHHHhCCeEEEeCCCChHHHHHHH
Confidence            32 12         6677888888876543   89999999999999999999999999999999999999988888999


Q ss_pred             chhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCC
Q psy2651         234 NDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGE  313 (342)
Q Consensus       234 N~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~  313 (342)
                      |+||+++|+|+|+++++++.++ +|+++|+||+||||.|+++|++.+|++++|+..+|++++||||++.+. |+|+++++
T Consensus       152 N~WV~~~T~gkI~~ll~~~~~~-~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~v~V~mM~~~~~-~~y~~~~~  229 (397)
T 3pzf_A          152 NNWVSEHTNGRLREIVTPDSLE-GAVITLVNVIYFKGLWTYPFPEVANNVKPFYGTRGKPTNAQYMEQNGQ-FYYDNSAD  229 (397)
T ss_dssp             HHHHHHHTTTSCCCCCCGGGGT-TCSEEEEEEEEEEEEBSSCCCCCSCCEEEECCSSSSCEEEEEEEEEEE-EEEEEETT
T ss_pred             HHHHHHHhCCcccccCCCCCcc-cceeEEeeheecccccCccCCcccccccccccCCCcEEEEEEEEecCC-cCeEEccC
Confidence            9999999999999999988888 899999999999999999999999999999999999999999999998 99999999


Q ss_pred             CCeEEEEEeC-CCcEEEEEeecCCCCCC
Q psy2651         314 DGFKMLELPY-GVSISFIIKSQVVPEMG  340 (342)
Q Consensus       314 l~~~vLELPY-~~~~SMlI~~~ILP~~g  340 (342)
                      ++++|||||| ++.+||+|   |||+++
T Consensus       230 l~~~vleLPy~~~~~sm~i---iLP~~~  254 (397)
T 3pzf_A          230 LGAQILRLPYRGNKLAMYF---ILPNPD  254 (397)
T ss_dssp             TTEEEEEEEBTTSSEEEEE---EEECTT
T ss_pred             CCEEEEEEEcCCCceEEEE---EECCCC
Confidence            9999999999 99999999   899975


No 31 
>1qmn_A AACT, alpha-1-antichymotrypsin; serpin, serine proteinase inhibitor, partial loop insertion, loop-sheet polymerization, emphysema, disease mutation; 2.27A {Homo sapiens} SCOP: e.1.1.1 PDB: 3dlw_A
Probab=100.00  E-value=2.6e-51  Score=405.08  Aligned_cols=231  Identities=32%  Similarity=0.527  Sum_probs=206.2

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      .+.+..+ +||++||+                 ++... +++|+||||+||+.+|+|+++||+|+|++||.++||++...
T Consensus        26 ~l~~~~~-~Fa~~l~~-----------------~l~~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~   87 (401)
T 1qmn_A           26 GLASANV-DFAFSLYK-----------------QLVLKAPDKNVIFSPPSISTALAFLSLGAHNTTLTEILKGLKFNLTE   87 (401)
T ss_dssp             -CHHHHH-HHHHHHHH-----------------HHHHHCSSSCEEECHHHHHHHHHHHGGGCCHHHHHHHHHHTTCCTTT
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHHhcCCCCCEEEecHHHHHHHHHHHhhccCHHHHHHHHHhCCCCCC
Confidence            3455566 99999999                 88766 78899999999999999999999999999999999997543


Q ss_pred             cchhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhch
Q psy2651         159 TLLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMND  235 (342)
Q Consensus       159 ~~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~  235 (342)
                      .++.+       ++..|+.++..+...+   .+.+||+||+++++++.++|.+.++++|+++++.+||.++.++++.||+
T Consensus        88 ~~~~~-------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN~  160 (401)
T 1qmn_A           88 TSEAE-------IHQSFQHLLRTLNQSSDELQLSMGNAMFVKEQLSLLDRFTEDAKRLYGSEAFATDFQDSAAAKKLIND  160 (401)
T ss_dssp             CCHHH-------HHHHHHHHHHHHCCCSSSCEEEEEEEEEEESSCCCCHHHHHHHHHHHCCEEEEECGGGHHHHHHHHHH
T ss_pred             CCHHH-------HHHHHHHHHHHHhcCCCCceEEEEEEEEeeCCCchHHHHHHHHHHhcCCeEEecCccCHHHHHHHHHH
Confidence            22212       8899999999987643   8999999999999999999999999999999999999988888899999


Q ss_pred             hhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCC
Q psy2651         236 WVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDG  315 (342)
Q Consensus       236 WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~  315 (342)
                      ||+++|+|+|+++++  +++++|+++|+||+||||.|+++|++..|++++||..+|+.++||||++.+..|+|+++++++
T Consensus       161 WV~~~T~gkI~~ll~--~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~y~~~~~l~  238 (401)
T 1qmn_A          161 YVKNGTRGKITDLIK--DLDSQTMMVLVNYIFFKAKWEMPFDPQDTHQSRFYLSKKKWVMVPMMSLHHLTIPYFRDEELS  238 (401)
T ss_dssp             HCSSEEEEEEEECC------CCCCEEEEEEEEEEEEBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEEETTTT
T ss_pred             HHHHHhcCchhhhcc--CCCCCceEEEEEeeeeeehhcCCCChhcCccceEEcCCCcEEEeeEEEEcCceEEEEEeCCCc
Confidence            999999999999996  599999999999999999999999999999999999999999999999998438999999999


Q ss_pred             eEEEEEeC-CCcEEEEEeecCCCCCCC
Q psy2651         316 FKMLELPY-GVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       316 ~~vLELPY-~~~~SMlI~~~ILP~~g~  341 (342)
                      ++|||||| |+. ||+|   |||++|.
T Consensus       239 ~~vleLPY~~~~-sm~i---iLP~~~~  261 (401)
T 1qmn_A          239 CTVVELKYTGNA-SALF---ILPDQDK  261 (401)
T ss_dssp             EEEEEEEBSSSE-EEEE---EEECTTC
T ss_pred             eEEEEEecCCCe-EEEE---EEECCCC
Confidence            99999999 765 9999   7999864


No 32 
>3kcg_I Antithrombin-III, ATIII; michaelis complex, blood coagulation, calcium, disulfide bond, EGF-like domain, glycoprotein, hemophilia, hydrolase; HET: NAG FUC MAN NTP; 1.70A {Homo sapiens} SCOP: e.1.1.1 PDB: 1e04_I* 1ath_A 1ant_L* 1br8_L 1azx_I* 1dzh_L* 1e03_L* 1dzg_L* 1e05_L* 1jvq_L* 1lk6_L* 1nq9_I* 1oyh_L* 1r1l_L* 1sr5_A* 2ant_L* 2beh_L* 2hij_L* 2znh_A* 3evj_I* ...
Probab=100.00  E-value=1.6e-51  Score=409.98  Aligned_cols=231  Identities=27%  Similarity=0.533  Sum_probs=207.2

Q ss_pred             ccccccccccccccccccCCcchhhhhhhhhhhhhcc--CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          81 FSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN--KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        81 ~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~--~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      ++.+.+ +||++||+                 +++..  +++|+||||+||+.+|+|+++||+|+|++||.++||++...
T Consensus        51 l~~~~~-~Fa~~L~k-----------------~l~~~~~~~~Ni~~SP~SI~~aLaml~~GA~G~T~~ql~~~L~~~~~~  112 (432)
T 3kcg_I           51 LSKANS-RFATTFYQ-----------------HLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTIS  112 (432)
T ss_dssp             HHHHHH-HHHHHHHH-----------------HHHHHSCTTSCCCBCHHHHHHHHHHHHTTCCHHHHHHHHHHTTCTTSC
T ss_pred             HHHHHh-HHHHHHHH-----------------HHhhccCCCCCEEEcHHHHHHHHHHHHhhcccHHHHHHHHHhCCCccc
Confidence            344556 99999999                 88763  58899999999999999999999999999999999997432


Q ss_pred             -cchhcccchhHHHHHHHHHHHHHhCC---Cc-chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCc-HHHHHh
Q psy2651         159 -TLLKDYKGIIDQLSKDYKGIIDQLSK---SP-ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQP-PAAAKE  232 (342)
Q Consensus       159 -~~~~~~~~~~~~v~~~~~~l~~~l~~---~~-~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~-~~a~~~  232 (342)
                       ...++       ++..|+.++..+.+   .+ .+.+||+||+++++++.++|++.++++|+++++.+||.+. +.+++.
T Consensus       113 ~~~~~~-------i~~~f~~l~~~l~~~~~~~~~l~~an~lf~~~~~~l~~~F~~~~~~~y~a~~~~vdF~~~~~~a~~~  185 (432)
T 3kcg_I          113 EKTSDQ-------IHFFFAKLNCRLYRKANKASKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAA  185 (432)
T ss_dssp             HHHHHT-------HHHHHHHHHHHHHHHHTTTEEEEEEEEEEEETTSCCCHHHHHHHHHHHSSCCEEECHHHHHHHHHHH
T ss_pred             cccHHH-------HHHHHHHHHHHHhcccCCCcEEEEEEEEEEcCCCccCHHHHHHHHHHhCCeEEeccCCCCHHHHHHH
Confidence             11112       88888888776642   23 8999999999999999999999999999999999999865 445667


Q ss_pred             hchhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeC
Q psy2651         233 MNDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAG  312 (342)
Q Consensus       233 IN~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~  312 (342)
                      ||+||+++|+|+|++++++++++++|+++|+||+||||.|+++|++.+|++++||..+|++++||||++.+. |+|++++
T Consensus       186 IN~WV~~~T~gkI~~ll~~~~l~~~T~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~-f~y~~~~  264 (432)
T 3kcg_I          186 INKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGK-FRYRRVA  264 (432)
T ss_dssp             HHHHHHHHTTTSSCCSSCTTSSCTTCCEEEEEEEEEEECBSSCCCGGGCEEEEEECTTSCEEEEEEEEEEEE-EEEEECG
T ss_pred             HHHHHHhhccCchhccCCcccCCCCceEEEEeHHhhhhhhhcCCCcccceeeeEEECCCeEEEEEEEEecce-eeEEEec
Confidence            999999999999999999889999999999999999999999999999999999999999999999999998 9999998


Q ss_pred             CCCeEEEEEeC-CCcEEEEEeecCCCCCCC
Q psy2651         313 EDGFKMLELPY-GVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       313 ~l~~~vLELPY-~~~~SMlI~~~ILP~~g~  341 (342)
                      + +++|||||| |+++||+|   |||++++
T Consensus       265 ~-~~~vleLPy~~~~~sm~i---iLP~~~~  290 (432)
T 3kcg_I          265 E-GTQVLELPFKGDDITMVL---ILPKPEK  290 (432)
T ss_dssp             G-GCEEEEEEBTTSSEEEEE---EECCTTS
T ss_pred             C-CcEEEEEEcCCCceEEEE---EecCCCC
Confidence            8 999999999 99999999   8999874


No 33 
>1imv_A PEDF, pigment epithelium-derived factor; serpin, angiogenesis, signaling protein; HET: NAG; 2.85A {Homo sapiens} SCOP: e.1.1.1
Probab=100.00  E-value=9.8e-51  Score=400.57  Aligned_cols=227  Identities=23%  Similarity=0.443  Sum_probs=208.7

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      ++.+..+ +||++||+                 ++... +++|+||||+||+.+|+|+++||+|+|++||.++||++..+
T Consensus        33 ~l~~~~~-~Fa~~l~~-----------------~l~~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~   94 (398)
T 1imv_A           33 KLAAAVS-NFGYDLYR-----------------VRSSMSPTTNVLLSPLSVATALSALSLGADERTESIIHRALYYDLIS   94 (398)
T ss_dssp             HHHHHHH-HHHHHHHH-----------------HHHHHCTTSCEEECHHHHHHHHHHHGGGCCHHHHHHHHHHTTGGGCC
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHHccCCCCCEEEChHHHHHHHHHHHHhcccHHHHHHHHHhCCCCCC
Confidence            3445556 99999999                 88766 78899999999999999999999999999999999997643


Q ss_pred             cchhcccchhHHHHHHHHHHHHHhCCCc-chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhchhh
Q psy2651         159 TLLKDYKGIIDQLSKDYKGIIDQLSKSP-ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMNDWV  237 (342)
Q Consensus       159 ~~~~~~~~~~~~v~~~~~~l~~~l~~~~-~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~WV  237 (342)
                      ..+         ++..|+.++..+...+ .+.+||+||+++++++.++|.+.++++|+++++.+| .++.++++.||+||
T Consensus        95 ~~~---------~~~~~~~l~~~l~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vd-~~~~~a~~~IN~WV  164 (398)
T 1imv_A           95 SPD---------IHGTYKELLDTVTAPQKNLKSASRIVFEKKLRIKSSFVAPLEKSYGTRPRVLT-GNPRLDLQEINNWV  164 (398)
T ss_dssp             CSC---------HHHHHHHHHHHHTSTTSCEEEEEEEEECTTCCCCHHHHHHHHHHHCCCCEECC-SCHHHHHHHHHHHH
T ss_pred             cHH---------HHHHHHHHHHHhhCCCCCeEEEEEEeecCCCcHHHHHHHHHHHHhCCcceecC-CCHHHHHHHHHHHH
Confidence            234         8999999999887655 778999999999999999999999999999999999 88888999999999


Q ss_pred             hcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeec-ceeeeEEEeCCCCe
Q psy2651         238 SNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVK-DSFYMYEEAGEDGF  316 (342)
Q Consensus       238 ~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~-~~~f~y~~~~~l~~  316 (342)
                      +++|+|+|+++++  +++++|+++|+||+||||.|+++|++..|++++||..+|++++||||++. +. |+|++++++++
T Consensus       165 ~~~T~gkI~~ll~--~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~~-f~~~~~~~l~~  241 (398)
T 1imv_A          165 QAQMKGKLARSTK--EIPDEISILLLGVAHFKGQWVTKFDSRKTSLEDFYLDEERTVRVPMMSDPKAV-LRYGLDSDLSC  241 (398)
T ss_dssp             HHHTTTCSCCCCS--CCCSSCSEEEEEEEEEECCEEECCCGGGCEEEEEESSSSCEEEEEEEEEEEEE-EEEEEETTTTE
T ss_pred             HHhhcCchhhhhh--ccCCCceEEEEEhhhhhhhhcCcCChhhCeeeEEEeCCCEEEEEEEEEEecce-eEEEEecCCCe
Confidence            9999999999996  79999999999999999999999999999999999999999999999999 98 99999999999


Q ss_pred             EEEEEeC-CCcEEEEEeecCCC--CCCC
Q psy2651         317 KMLELPY-GVSISFIIKSQVVP--EMGR  341 (342)
Q Consensus       317 ~vLELPY-~~~~SMlI~~~ILP--~~g~  341 (342)
                      +|||||| | ++||+|   |||  +++.
T Consensus       242 ~vleLPY~~-~~sm~i---iLP~~~~~~  265 (398)
T 1imv_A          242 KIAQLPLTG-SMSIIF---FLPLKVTQN  265 (398)
T ss_dssp             EEEEEEETT-TEEEEE---EEESSCCSC
T ss_pred             EEEEEccCC-CeEEEE---EEeCCCCCC
Confidence            9999999 6 599999   799  7654


No 34 
>2v95_A Corticosteroid-binding globulin; transport protein, CBG, RCL, serpin, secreted, transport, glycoprotein, lipid-binding, glucocorticoids; HET: HCY; 1.93A {Rattus norvegicus}
Probab=100.00  E-value=9.1e-51  Score=397.39  Aligned_cols=227  Identities=24%  Similarity=0.489  Sum_probs=203.3

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      .++++.+ +||++||+                 ++... +++|+||||+||+.+|+|+++||   |++||.++||++...
T Consensus         8 ~l~~~~~-~Fa~~l~~-----------------~l~~~~~~~N~v~SP~Si~~aLaml~~GA---T~~el~~~L~~~~~~   66 (371)
T 2v95_A            8 GLAPTNV-DFAFNLYQ-----------------RLVALNPDKNTLISPVSISMALAMVSLGS---AQTQSLQSLGFNLTE   66 (371)
T ss_dssp             TTHHHHH-HHHHHHHH-----------------HHHHHCTTSCEEECHHHHHHHHHHHTTTC-----CHHHHHHTCCTTT
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHhccCCCCcEEEchHHHHHHHHHHHHHH---HHHHHHHHhCCCCCC
Confidence            3445556 99999999                 88765 78999999999999999999999   999999999997543


Q ss_pred             cchhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhch
Q psy2651         159 TLLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMND  235 (342)
Q Consensus       159 ~~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~  235 (342)
                      .++.+       ++..|+.++..+...+   .+.+||+||+++++++.++|.+.++++|+++++.+||.+++++++.||+
T Consensus        67 ~~~~~-------~~~~~~~l~~~l~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~a~~~IN~  139 (371)
T 2v95_A           67 TSEAE-------IHQSFQYLNYLLKQSDTGLEMNMGNAMFLLQKLKLKDSFLADVKQYYESEALAIDFEDWTKASQQINQ  139 (371)
T ss_dssp             SCHHH-------HHHHHHHHHHHHTTGGGSEEEEEEEEEEECTTCCBCHHHHHHHHHHSCCEEEECCCSSHHHHHHHHHH
T ss_pred             CCHHH-------HHHHHHHHHHHHhCCCCCcEEEEEEEEeEeCCCchhHHHHHHHHHHhCCceEEecCccHHHHHHHHHH
Confidence            21212       8899999999887643   8999999999999999999999999999999999999988889999999


Q ss_pred             hhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCC
Q psy2651         236 WVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDG  315 (342)
Q Consensus       236 WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~  315 (342)
                      ||+++|+|+|+++++  +++++|+++|+||+||||.|+++|++.+|++++||..+|++++||||++.+. |+|+++++++
T Consensus       140 WV~~~T~gkI~~l~~--~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~-~~y~~~~~l~  216 (371)
T 2v95_A          140 HVKDKTQGKIEHVFS--DLDSPASFILVNYIFLRGIWELPFSPENTREEDFYVNETSTVKVPMMVQSGS-IGYFRDSVFP  216 (371)
T ss_dssp             HHHHHTTTCCCCSCC--C--CCCSEEEEEEEEEEECBSSCCCGGGCEEEEEECSSSCEEEEEEEEEEEE-EEEEEETTTT
T ss_pred             HHHHHhcCchhhhcc--CCCCCceEEEEEHHhhhhhhhCcCCCcccceeEEEECCCeEEEEEEEEeeee-EeeEEeCCCC
Confidence            999999999999996  5999999999999999999999999999999999999999999999999998 9999999999


Q ss_pred             eEEEEEeC-CCcEEEEEeecCCCCCCC
Q psy2651         316 FKMLELPY-GVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       316 ~~vLELPY-~~~~SMlI~~~ILP~~g~  341 (342)
                      ++|||||| |+ .||+|   |||+++.
T Consensus       217 ~~vleLPy~~~-~sm~i---iLP~~~~  239 (371)
T 2v95_A          217 CQLIQMDYVGN-GTAFF---ILPDQGQ  239 (371)
T ss_dssp             EEEEEEEBSSS-EEEEE---EEECTTC
T ss_pred             EEEEEEecCCC-eEEEE---EecCCCC
Confidence            99999999 64 79999   7999874


No 35 
>3le2_A Serpin-ZX; apoplast, glycoprotein, protease inhibitor, secreted, serine protease inhibitor, hydrolase; 2.20A {Arabidopsis thaliana} SCOP: e.1.1.0
Probab=100.00  E-value=6.9e-51  Score=401.03  Aligned_cols=220  Identities=29%  Similarity=0.516  Sum_probs=201.3

Q ss_pred             cccccccccccCCcchhhhhhhhhhhh-hcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcccchhccc
Q psy2651          88 RFNGKLHKKEDFKPFSIQLSTLVEWNL-AAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYK  165 (342)
Q Consensus        88 ~Fa~~L~~~~~~~~~~~~~~~~~~~~l-~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~~~~~~~  165 (342)
                      +||++||+                 ++ .+. +++|+||||+||+.+|+|+++||+|+|++||.++||++..+  +    
T Consensus        14 ~Fa~~L~~-----------------~l~~~~~~~~Ni~~SP~Si~~aLaml~~GA~G~T~~ql~~~L~~~~~~--~----   70 (393)
T 3le2_A           14 QVSMNLAK-----------------HVITTVSQNSNVIFSPASINVVLSIIAAGSAGATKDQILSFLKFSSTD--Q----   70 (393)
T ss_dssp             HHHHHHHH-----------------HHHHTSCTTCCEEECHHHHHHHHHHHHHTCCTHHHHHHHHHHTCSSHH--H----
T ss_pred             HHHHHHHH-----------------HHhcccCCCCCEEECHHHHHHHHHHHHhcCCCcHHHHHHHHhCCCCHH--H----
Confidence            99999999                 98 555 78999999999999999999999999999999999998432  3    


Q ss_pred             chhHHHHHHHHHHHHHhCC-----Cc-chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCC-cHHHHHhhchhhh
Q psy2651         166 GIIDQLSKDYKGIIDQLSK-----SP-ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQ-PPAAAKEMNDWVS  238 (342)
Q Consensus       166 ~~~~~v~~~~~~l~~~l~~-----~~-~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~-~~~a~~~IN~WV~  238 (342)
                           ++..++.++..+..     .+ .+.+||+||+++++++.++|++.++++|+++++.+||.+ ++.++++||+||+
T Consensus        71 -----~~~~~~~l~~~l~~~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~WV~  145 (393)
T 3le2_A           71 -----LNSFSSEIVSAVLADGSANGGPKLSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQSKAVEVIAEVNSWAE  145 (393)
T ss_dssp             -----HHHHHHHTHHHHHSCCGGGTSCEEEEEEEEEEETTSCBCHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHhhccccCCCCcEEEeeeehhhcCCCCcChHHHHHHHHhhcceEEEecccccHHHHHHHHHHHHH
Confidence                 78888888877642     12 799999999999999999999999999999999999976 5678899999999


Q ss_pred             cccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCCeEE
Q psy2651         239 NHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDGFKM  318 (342)
Q Consensus       239 ~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~~~v  318 (342)
                      ++|+|+|++++++++++++|+++|+||+||||.|+++|++.+|++++||..+|++++||||++.+. +.|++.  .+++|
T Consensus       146 ~~T~gkI~~ll~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~-~~~~~~--~~~~v  222 (393)
T 3le2_A          146 KETNGLITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQEGEFHLLDGNKVTAPFMTSKKK-QYVSAY--DGFKV  222 (393)
T ss_dssp             HHTTTSCCCSSCTTCSCTTCCEEEEEEEEEECCBSSCCCGGGCEEEEEECTTSCEEEEEEEECCSC-EEEEEE--TTEEE
T ss_pred             HhhcCchhhhCCccCCCCCcEEEEEEeeeEecccccCCChhhccccccEeCCCcEEEEccccccCe-eeeeec--cCcEE
Confidence            999999999999999999999999999999999999999999999999999999999999999998 777764  48999


Q ss_pred             EEEeC-C----CcEEEEEeecCCCCCCC
Q psy2651         319 LELPY-G----VSISFIIKSQVVPEMGR  341 (342)
Q Consensus       319 LELPY-~----~~~SMlI~~~ILP~~g~  341 (342)
                      ||||| +    .++||+|   |||++++
T Consensus       223 leLPy~~~~~~~~~sm~i---iLP~~~~  247 (393)
T 3le2_A          223 LGLPYLQGQDKRQFSMYF---YLPDANN  247 (393)
T ss_dssp             EEEEBCCTTCSCCEEEEE---EEESSTT
T ss_pred             EEeecCCCCCCCcEEEEE---EeCCCCC
Confidence            99999 7    5899999   8999874


No 36 
>1mtp_A Serine proteinase inhibitor (serpin), chain A; structural genomics, protease inhibitor; 1.50A {Thermobifida fusca} SCOP: e.1.1.1
Probab=100.00  E-value=3e-50  Score=386.95  Aligned_cols=218  Identities=21%  Similarity=0.361  Sum_probs=203.3

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      .+.+..+ +||++||+                 ++.+. +++|+||||+||+.+|+|+++||+|+|++||.++||   . 
T Consensus         5 ~l~~~~~-~Fa~~l~~-----------------~l~~~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~---~-   62 (323)
T 1mtp_A            5 FLRDDHL-EFALHLHR-----------------RLAEAVPDGEVIWSPYSVACALGVLAAGARATTRTELTTLLG---T-   62 (323)
T ss_dssp             SSCHHHH-HHHHHHHH-----------------HHHHHSTTCCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHHT---S-
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHhccCCCCCEEEchHHHHHHHHHHHhhcCchHHHHHHHHHH---H-
Confidence            4455566 99999999                 88776 789999999999999999999999999999999998   2 


Q ss_pred             cchhcccchhHHHHHHHHHHHHHhCCCc-chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCC-CcHHHHHhhchh
Q psy2651         159 TLLKDYKGIIDQLSKDYKGIIDQLSKSP-ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFS-QPPAAAKEMNDW  236 (342)
Q Consensus       159 ~~~~~~~~~~~~v~~~~~~l~~~l~~~~-~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~-~~~~a~~~IN~W  236 (342)
                        +         ++..|+.+ ..+...+ .+.+||+||+++++++.++|.+.++++|+++++.+||. +++.+++.||+|
T Consensus        63 --~---------~~~~~~~l-~~l~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~W  130 (323)
T 1mtp_A           63 --D---------PAPLLAAL-DRAVTDSPDLASRTVLWVSADVPVRSSFRATMHDRPDSDVRTADFRTNPEGVRATVNAD  130 (323)
T ss_dssp             --C---------HHHHHHHH-HHHTCSCTTEEEEEEEEECTTSCBCHHHHHHHHHSTTCEEEECCTTTCHHHHHHHHHHH
T ss_pred             --H---------HHHHHHHH-HHHhCCCcEEeeeeeeeeECCcEecHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHH
Confidence              3         78888888 7776333 89999999999999999999999999999999999997 778899999999


Q ss_pred             hhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCCe
Q psy2651         237 VSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDGF  316 (342)
Q Consensus       237 V~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~~  316 (342)
                      |+++|+|+|++++++++++++|+++|+||+||||.|+++|++..|++++|| .+|++++||||++.+. |+|++++++++
T Consensus       131 V~~~T~g~I~~l~~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~-~~~~~~~V~mM~~~~~-~~y~~~~~~~~  208 (323)
T 1mtp_A          131 IADATRGMIRELLPQGAVTPDLRAILTNALWAKARWTTPFEAHLTREGTFR-TPRGPKRVPFMHRTKT-MPYATARGWRM  208 (323)
T ss_dssp             HHHHTTTSCSCSSCTTCSCTTEEEEEEEEEEEEEEBSSCCCGGGCEEEEEE-ETTEEEEEEEEEEEEE-EEEEEETTEEE
T ss_pred             HHHHhcCcccccCCcCCCCcccceeeeeeeeeeccccCCCCcccCeeeeee-cCCeEEEeeEEEeeee-EeeEEeCCCCE
Confidence            999999999999999999999999999999999999999999999999999 9999999999999998 99999999999


Q ss_pred             EEEEEeCCCcEEEEEeecCCCC
Q psy2651         317 KMLELPYGVSISFIIKSQVVPE  338 (342)
Q Consensus       317 ~vLELPY~~~~SMlI~~~ILP~  338 (342)
                      +||||  ++++||+|   |||+
T Consensus       209 ~vleL--~~~~sm~i---iLP~  225 (323)
T 1mtp_A          209 VTLHA--HDELAVDV---LLPP  225 (323)
T ss_dssp             EEEEB--STTEEEEE---EECC
T ss_pred             EEEEE--CCcEEEEE---EecC
Confidence            99999  99999999   7998


No 37 
>1jmo_A HC-II, heparin cofactor II, HLS2, serin; serpin, thrombin, protease, inhibition, inhibitor, blood CLO; HET: TYS NDG NAG; 2.20A {Homo sapiens} SCOP: e.1.1.1 PDB: 1jmj_A*
Probab=100.00  E-value=1.2e-49  Score=400.51  Aligned_cols=228  Identities=26%  Similarity=0.452  Sum_probs=207.1

Q ss_pred             ccccccccccccccccccCCcchhhhhhhhhhhhhc--cCCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCC--
Q psy2651          81 FSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAA--NKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKH--  156 (342)
Q Consensus        81 ~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~--~~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~--  156 (342)
                      ++.+.+ +||++||+                 ++.+  .+++|+||||+||+.+|+|+++||+|+|++||.++||++.  
T Consensus       107 l~~~~~-~Fa~~L~k-----------------~l~~~~~~~~NivfSP~SI~~aLaml~~GA~G~T~~eL~~~L~~~~~~  168 (480)
T 1jmo_A          107 LNILNA-KFAFNLYR-----------------VLKDQVNTFDNIFIAPVGISTAMGMISLGLKGETHEQVHSILHFKDFV  168 (480)
T ss_dssp             HHHHHH-HHHHHHHH-----------------HHHTTSCTTSCEEECHHHHHHHHHHHGGGCCHHHHHHHHHHTTHHHHH
T ss_pred             HHHHHH-HHHHHHHH-----------------HHHhccCCCCCEEEcHHHHHHHHHHHHHhcCcHHHHHHHHHhCCCccc
Confidence            344556 99999999                 8876  3678999999999999999999999999999999999975  


Q ss_pred             --ccc-chhcccchhHHHHHHHHHHHHHhCCCc---chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHH
Q psy2651         157 --SET-LLKDYKGIIDQLSKDYKGIIDQLSKSP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAA  230 (342)
Q Consensus       157 --~~~-~~~~~~~~~~~v~~~~~~l~~~l~~~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~  230 (342)
                        .+. ++.       .++..|+.++..+...+   .+++||+||+++++++.++|++.++++|+++++.+||.++.. +
T Consensus       169 ~~~~~~~~~-------~i~~~f~~ll~~l~~~~~~~~L~~AN~lfv~~~~~l~~~F~~~~~~~y~a~~~~vDF~~~~~-~  240 (480)
T 1jmo_A          169 NASSKYEIT-------TIHNLFRKLTHRLFRRNFGYTLRSVNDLYIQKQFPILLDFKTKVREYYFAEAQIADFSDPAF-I  240 (480)
T ss_dssp             HHCTTCCHH-------HHHHHHHHHHHHHHSSCSSSEEEEEEEEEEETTSCCCHHHHHHHHHHHSCCEEEECTTCHHH-H
T ss_pred             cccccCCHH-------HHHHHHHHHHHHhhcCCCCceEEEEEEEeecCCCcccHHHHHHHHHhhccceeeecccCHHH-H
Confidence              210 011       18899999998886543   899999999999999999999999999999999999998876 8


Q ss_pred             HhhchhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEE
Q psy2651         231 KEMNDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEE  310 (342)
Q Consensus       231 ~~IN~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~  310 (342)
                      +.||+||+++|+|+|++++  ++++++|+++|+||+||||.|+++|++..|++++||..+|++++||||++.+. |+|++
T Consensus       241 ~~IN~WV~~~T~gkI~~ll--~~l~~~T~lvLvNAiyFKg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~-f~y~~  317 (480)
T 1jmo_A          241 SKTNNHIMKLTKGLIKDAL--ENIDPATQMMILNCIYFKGSWVNKFPVEMTHNHNFRLNEREVVKVSMMQTKGN-FLAAN  317 (480)
T ss_dssp             HHHHHHHHHHTTTSSCCTT--CSCCTTCCEEEEEEEEEECCBSSCCCGGGCEEEEEECSSSCEEEEEEEEEEEE-EEEEE
T ss_pred             HHHHHHHHHhhCCChhhhh--cccCCCCeEEEEehHeeeccccCCCCCCCceeEEEEeCCCcEEEEEEEEEecc-eeeEE
Confidence            8999999999999999999  58999999999999999999999999999999999999999999999999998 99999


Q ss_pred             eCCCCeEEEEEeCCCcEEEEEeecCCCCCC
Q psy2651         311 AGEDGFKMLELPYGVSISFIIKSQVVPEMG  340 (342)
Q Consensus       311 ~~~l~~~vLELPY~~~~SMlI~~~ILP~~g  340 (342)
                      +++++++||||||.+++||+|   |||+++
T Consensus       318 ~~~l~~~vleLPY~~~~SM~I---iLP~~~  344 (480)
T 1jmo_A          318 DQELDCDILQLEYVGGISMLI---VVPHKM  344 (480)
T ss_dssp             ETTTTEEEEEEEETTTEEEEE---EEESSG
T ss_pred             eCCCceEEEEEecCCcEEEEE---EecCCC
Confidence            999999999999977799999   899864


No 38 
>1sng_A COG4826: serine protease inhibitor; serine protease inhibitor (serpin), native state., hydrolase inhibitor; 1.76A {Thermobifida fusca} SCOP: e.1.1.1
Probab=100.00  E-value=3.9e-49  Score=385.73  Aligned_cols=218  Identities=21%  Similarity=0.357  Sum_probs=203.6

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      .+.+..+ +||++||+                 ++.+. +++|+||||+||+.+|+|+++||+|+|++||.++||   . 
T Consensus         9 ~l~~~~~-~Fa~~l~~-----------------~l~~~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~---~-   66 (370)
T 1sng_A            9 FLRDDHL-EFALHLHR-----------------RLAEAVPDGEVIWSPYSVAXALGVLAAGARATTRTELTTLLG---T-   66 (370)
T ss_dssp             CCCHHHH-HHHHHHHH-----------------HHHHTSTTCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHT---S-
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHHhcCCCCCEEEccHHHHHHHHHHHhhccchHHHHHHHHHH---H-
Confidence            4455666 99999999                 88876 789999999999999999999999999999999998   2 


Q ss_pred             cchhcccchhHHHHHHHHHHHHHhCCCc-chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCC-CcHHHHHhhchh
Q psy2651         159 TLLKDYKGIIDQLSKDYKGIIDQLSKSP-ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFS-QPPAAAKEMNDW  236 (342)
Q Consensus       159 ~~~~~~~~~~~~v~~~~~~l~~~l~~~~-~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~-~~~~a~~~IN~W  236 (342)
                        +         ++..|+.+ ..+...+ .+.+||+||+++++++.++|.+.++++|+++++.+||. +++++++.||+|
T Consensus        67 --~---------~~~~~~~l-~~l~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~W  134 (370)
T 1sng_A           67 --D---------PAPLLAAL-DRAVTDSPDLASRTVLWVSADVPVRSSFRATMHDRPDSDVRTADFRTNPEGVRATVNAD  134 (370)
T ss_dssp             --C---------HHHHHHHH-HHTTTTCTTEEEEEEEEEETTSCCCHHHHHHHHTSTTEEEEEECTTTCHHHHHHHHHHH
T ss_pred             --H---------HHHHHHHH-HHHhCCCceEEEeeeeeeeCCCcccHHHHHHHHhhhCCeEEEecCcCCHHHHHHHHHHH
Confidence              3         78888888 7776333 89999999999999999999999999999999999997 778899999999


Q ss_pred             hhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCCe
Q psy2651         237 VSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDGF  316 (342)
Q Consensus       237 V~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~~  316 (342)
                      |+++|+|+|++++++++++++|+++|+||+||||.|+++|++..|++++|| .+|++++||||++.+. |+|++++++++
T Consensus       135 V~~~T~g~I~~l~~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~-~~~~~~~V~mM~~~~~-~~y~~~~~~~~  212 (370)
T 1sng_A          135 IADATRGMIRELLPQGAVTPDLRAILTNALWAKARWTTPFEAHLTRAGTFR-TPRGPKRVPFMHRTKT-MPYATARGWRM  212 (370)
T ss_dssp             HHHHTTTSSCCSSCTTSCCTTCCEEEEEEEEEECCBSSCCCGGGCEEEEEE-ETTEEEEEEEEEEEEE-EEEEEETTEEE
T ss_pred             HHHHhcCchhhccCccccCCcccEEEEEEEEEccccccCCCcccCeeeeEe-cCCeEEEeEEEEEeee-eeeEEeCCCCE
Confidence            999999999999999999999999999999999999999999999999999 9999999999999998 99999999999


Q ss_pred             EEEEEeCCCcEEEEEeecCCCC
Q psy2651         317 KMLELPYGVSISFIIKSQVVPE  338 (342)
Q Consensus       317 ~vLELPY~~~~SMlI~~~ILP~  338 (342)
                      +||||  ++++||+|   |||+
T Consensus       213 ~vleL--~~~~sm~i---iLP~  229 (370)
T 1sng_A          213 VTLHA--HDELAVDV---LLPP  229 (370)
T ss_dssp             EEEEB--STTCEEEE---EECC
T ss_pred             EEEEE--CCCEEEEE---EecC
Confidence            99999  99999999   7998


No 39 
>2wxy_C Angiotensinogen, serpin A8; glycoprotein, hypertension, vasoconstrictor, renin, serpins, vasoactive, hormone; 2.10A {Mus musculus} PDB: 2wxx_A 2wy0_C 2wxz_A 2wxz_C 2wy1_A
Probab=100.00  E-value=4.2e-49  Score=394.74  Aligned_cols=234  Identities=17%  Similarity=0.216  Sum_probs=205.0

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCE-EEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCc
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENA-IISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHS  157 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Ni-v~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~  157 (342)
                      ++.+..+ +||++||+                 ++.+. +++|+ ||||+||+.+|+|+++||+|+|++||.++||++..
T Consensus        72 ~l~~~~~-~Fa~~L~~-----------------~l~~~~~~~Ni~v~SP~SI~~aLaml~~GA~g~T~~el~~~L~~~~~  133 (453)
T 2wxy_C           72 QVAMITN-FVGFRMYK-----------------MLNEAGSGASGAILSPPALFGTLVSFYLGSLDPTASQLQTLLDVPVK  133 (453)
T ss_dssp             HHHHHHH-HHHHHHHH-----------------HHHHHCCCSSEEEECHHHHHHHHHHHHHTCCTTHHHHHHHHTTCCCC
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHhhcCCCCcEEEECHHHHHHHHHHHHhhcccHHHHHHHHHhCCCcc
Confidence            3456667 99999999                 88776 78999 99999999999999999999999999999999865


Q ss_pred             ccchhcccchhHHHHHHHHHHHHHhCC-----C--c-chhhhhhhhhccCcccchHHHHHhhhhcccc-cEEecC-CCcH
Q psy2651         158 ETLLKDYKGIIDQLSKDYKGIIDQLSK-----S--P-ELKIANKIYFAKDIELNPAYQTQAVDNFNSE-LGKVDF-SQPP  227 (342)
Q Consensus       158 ~~~~~~~~~~~~~v~~~~~~l~~~l~~-----~--~-~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~-v~~vdF-~~~~  227 (342)
                      +..... ....+.++..|+.+...+..     +  . .+.+||+||+++++++.++|.+.++++|+++ ++.+|| .++.
T Consensus       134 ~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~an~l~~~~~~~l~~~F~~~~~~~y~a~~~~~vdF~~~~~  212 (453)
T 2wxy_C          134 EGDCTS-RLDGHKVLAALRAVQGLLVTQGGSSSQTPLLQSIVVGLFTAPGFRLKHSFVQSLALFTPALFPRSLDLSTDPV  212 (453)
T ss_dssp             TTCGGG-SBCHHHHHHHHHHHHHHHHC--------CEEEEEEEEEEECTTCCEEHHHHHHHHTTCSCEEEEECCCSSCHH
T ss_pred             cccccc-cccHHHHHHHHHHHHHHHhhccccCCCCccEEEEEEeEeEeCCCCccHHHHHHHHHHcCCCceeeecccCCHH
Confidence            310000 00012277888888877753     1  1 6999999999999999999999999999996 999999 7888


Q ss_pred             HHHHhhchhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeee
Q psy2651         228 AAAKEMNDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYM  307 (342)
Q Consensus       228 ~a~~~IN~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~  307 (342)
                      ++++.||+||+++|+|+|+++++  +++++|+++|+|||||||.|+++|++..  +++||..+|++++||||++.+. |+
T Consensus       213 ~a~~~IN~WV~~~T~gkI~~ll~--~l~~~t~lvLvNaiyFKg~W~~~F~~~~--~~~F~~~~~~~v~V~mM~~~~~-f~  287 (453)
T 2wxy_C          213 LATEKINRFIKAVTGWKMNLPLE--GVSTDSTLLFNTYVHFQGTMRGFSQLPG--VHEFWVDNSISVSVPMISGTGN-FQ  287 (453)
T ss_dssp             HHHHHHHHHHHHHHCCCCCCCCC--CCCTTCCEEEEEEEEEEEEEEEEEECSS--CEEEEEETTEEEEECEEEEEEE-EE
T ss_pred             HHHHHHHHHHHHhcCCchhhhhc--ccCCCCeEEEEehheeeccCCCCCCCcc--CCCcEeCCCeEEEEEEEEEeCC-CC
Confidence            89999999999999999999996  6999999999999999999999999988  8899999999999999999998 99


Q ss_pred             EEEeCCCCeEEEEEeCCCcEEEEEeecCCCCCC
Q psy2651         308 YEEAGEDGFKMLELPYGVSISFIIKSQVVPEMG  340 (342)
Q Consensus       308 y~~~~~l~~~vLELPY~~~~SMlI~~~ILP~~g  340 (342)
                      |+++++++++||||||++++||+|   |||+++
T Consensus       288 y~~~~~l~~~vleLPY~~~~sm~i---iLP~~~  317 (453)
T 2wxy_C          288 HWSDAQNNFSVTCVPLGERATLLL---IQPHCI  317 (453)
T ss_dssp             EEEETTTTEEEEEEESSSSEEEEE---EEESSG
T ss_pred             EEEecCCCcEEEEEECCCCEEEEE---EecCCC
Confidence            999999999999999944799999   899986


No 40 
>2pef_A Serine protease inhibitor; serpin; 1.60A {Thermoanaerobacter tengcongensis} PDB: 2vh4_A 2pee_A
Probab=100.00  E-value=3.4e-49  Score=386.44  Aligned_cols=221  Identities=26%  Similarity=0.413  Sum_probs=200.5

Q ss_pred             ccccccccccccccccccCCcchhhhhhhhhhhhhccCCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcccc
Q psy2651          81 FSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETL  160 (342)
Q Consensus        81 ~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~~  160 (342)
                      +.++.+ +||++||+                 ++.. +++|+||||+||+.+|+|+++||+|+|++||.++||++... .
T Consensus         9 ~~~~~~-~Fa~~L~~-----------------~l~~-~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~-~   68 (373)
T 2pef_A            9 FIYNTA-DFSIELFK-----------------NSID-DKENSLISPLSAMLALAMTANGADNETLAQMEKALGKDISI-E   68 (373)
T ss_dssp             HHHHHH-HHHHHHHH-----------------TSCC-SSSCCEECHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCH-H
T ss_pred             HHHHHH-HHHHHHHH-----------------HhhC-CCCCEEEccHHHHHHHHHHHhhccChHHHHHHHHhCCCCCH-H
Confidence            334455 99999999                 8743 68899999999999999999999999999999999985433 2


Q ss_pred             hhcccchhHHHHHHHHHHHHHhCCCc--chhhhhhhhhc-cCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhchhh
Q psy2651         161 LKDYKGIIDQLSKDYKGIIDQLSKSP--ELKIANKIYFA-KDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMNDWV  237 (342)
Q Consensus       161 ~~~~~~~~~~v~~~~~~l~~~l~~~~--~l~~an~lfv~-~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~WV  237 (342)
                      +         ++..++.++..+...+  .+.+||+||++ +++++.++|.+.++++|+++++.+||.  +++++.||+||
T Consensus        69 ~---------~~~~~~~l~~~l~~~~~~~l~~an~l~~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~--~~a~~~IN~WV  137 (373)
T 2pef_A           69 D---------LNKYLYTYMKKLPNEEKSKLTIANSIWFKENDFMPSKDFLQIIADYYKADIFKAAFD--SSTVSDINNWV  137 (373)
T ss_dssp             H---------HHHHHHHHHHHSCCBTTEEEEEEEEEEEETTTEEECHHHHHHHHHHHCCEEEEECCS--HHHHHHHHHHH
T ss_pred             H---------HHHHHHHHHHHhhcCCCcEEEEEEEEEEecCCCchhHHHHHHHHHHhCCeeEecCch--HHHHHHHHHHH
Confidence            3         8899999999887633  89999999999 799999999999999999999999997  46889999999


Q ss_pred             hcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCCeE
Q psy2651         238 SNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDGFK  317 (342)
Q Consensus       238 ~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~~~  317 (342)
                      +++|+|+|+++++  +++++|+++|+||+||||.|+++|++..|++++||..+|++++||||++.+. | |.+  +++++
T Consensus       138 ~~~T~gkI~~ll~--~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~-~-y~~--~~~~~  211 (373)
T 2pef_A          138 KSKTNGMIDKILN--KIDPEDVMYLINAVAFDAEWETVYEKASVHEDIFTDVYGNRQKVEFMNSEEN-L-YIE--EENAV  211 (373)
T ss_dssp             HHHTTTSCCCSCS--CCCTTCCEEEEEEEEEEEEBSSCCCGGGEEEEEEECTTSCEEEEEEEEEEEE-E-EEE--ETTEE
T ss_pred             HHhccCchhhhhc--cCCCCceEEEEEeeeeeccccccCChhhccccceecCCCeEEEechhhccCe-E-Eee--cCCeE
Confidence            9999999999996  7999999999999999999999999999999999999999999999999998 8 655  67899


Q ss_pred             EEEEeC-CCcEEEEEeecCCCCCCC
Q psy2651         318 MLELPY-GVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       318 vLELPY-~~~~SMlI~~~ILP~~g~  341 (342)
                      +||||| ++++||+|   |||+++.
T Consensus       212 vleLPy~~~~~sm~i---iLP~~~~  233 (373)
T 2pef_A          212 GFVKPYAKNHYSFVA---ILPDENI  233 (373)
T ss_dssp             EEEEEBGGGSEEEEE---EEECTTS
T ss_pred             EEEEecCCCcEEEEE---EECCCCC
Confidence            999999 99999999   8999863


No 41 
>2wxw_A Angiotensinogen, serpin A8; glycoprotein, hypertension, vasoconstrictor, renin, serpins, vasoactive, hormone; 3.30A {Homo sapiens} PDB: 2x0b_B
Probab=100.00  E-value=5.2e-49  Score=394.04  Aligned_cols=234  Identities=15%  Similarity=0.194  Sum_probs=205.6

Q ss_pred             cccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCE--EEChhhHHHHHHHHHccCChhHHHHHHHHcCCCC
Q psy2651          80 SFSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENA--IISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKH  156 (342)
Q Consensus        80 ~~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Ni--v~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~  156 (342)
                      .+.+..+ +||++||+                 ++... +++|+  ||||+||+.+|+|+++||+|+|++||.++||++.
T Consensus        73 ~l~~~~~-~Fa~~L~k-----------------~l~~~~~~~Nin~v~SP~SI~~aLaml~~GA~G~T~~el~~~L~~~~  134 (453)
T 2wxw_A           73 MVGMLAN-FLGFRIYG-----------------MHSELWGVVHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPW  134 (453)
T ss_dssp             HHHHHHH-HHHHHHGG-----------------GCSCTTTSCSBSSEECHHHHHHHHHHHHHSCCTTHHHHHHHHHTCCC
T ss_pred             HHHHHHH-HHHHHHHH-----------------HHhhcCCCCCcCEEECHHHHHHHHHHHHhhcccHHHHHHHHHhCCCC
Confidence            3455666 99999999                 88776 77899  9999999999999999999999999999999986


Q ss_pred             cccchhcccchhHHHHHHHHHHHHHhCC-----Cc---chhhhhhhhhccCcccchHHHHHhhhhcccc-cEEecCCCcH
Q psy2651         157 SETLLKDYKGIIDQLSKDYKGIIDQLSK-----SP---ELKIANKIYFAKDIELNPAYQTQAVDNFNSE-LGKVDFSQPP  227 (342)
Q Consensus       157 ~~~~~~~~~~~~~~v~~~~~~l~~~l~~-----~~---~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~-v~~vdF~~~~  227 (342)
                      .+..... ....+.++..|+.+...+..     ++   .+.+||+||+++++++.++|++.++++|+++ ++.+||.++.
T Consensus       135 ~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~an~lf~~~~~~l~~~F~~~~~~~y~a~~~~~vdF~~~~  213 (453)
T 2wxw_A          135 KDKNCTS-RLDAHKVLSALQAVQGLLVAQGRADSQAQLLLSTVVGVFTAPGLHLKQPFVQGLALYTPVVLPRSLDFTELD  213 (453)
T ss_dssp             CTTCTTT-SBCHHHHHHHHHHHHHHHSCCTTTCSCCCEEEEEEEEEECCTTCCEEHHHHHHHHHHCSCEEECBCCTTSHH
T ss_pred             ccccccc-cccHHHHHHHHHHHHHHHhhcccccCCCccEEEEEEeEeEECCCccCHHHHHHHHHHhCccceeeeCCCCHH
Confidence            4310000 00012278888888888763     11   6999999999999999999999999999995 9999998888


Q ss_pred             HHHHhhchhhhcccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeee
Q psy2651         228 AAAKEMNDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYM  307 (342)
Q Consensus       228 ~a~~~IN~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~  307 (342)
                      ++++.||+||+++|+|+|+++++  +++++|+++|+|||||||.|+++|++..  +++||..+|++++||||++.+. |+
T Consensus       214 ~a~~~IN~WV~~~T~gkI~~ll~--~l~~~t~lvLvNaiyFKg~W~~~F~~~~--~~~F~~~~~~~v~V~mM~~~~~-f~  288 (453)
T 2wxw_A          214 VAAEKIDRFMQAVTGWKTGCSLM--GASVDSTLAFNTYVHFQGKMKGFSLLAE--PQEFWVDNSTSVSVPMLSGMGT-FQ  288 (453)
T ss_dssp             HHHHHHHHHHHHHHCSCCSCSST--TCCSSCCCEEEEEEEEEEEETTEEECSS--CCCBCSSSSCCBCCCCEEEEEE-EE
T ss_pred             HHHHHHHHHHHHHhcCchhhhhc--CcCCCCeEEEEehhEEeccCCCCCCccc--CCCcEeCCCEEEEEEEEEEecc-cc
Confidence            89999999999999999999996  6999999999999999999999999988  7899999999999999999998 99


Q ss_pred             EEEeCCCCeEEEEEeCCCcEEEEEeecCCCCCC
Q psy2651         308 YEEAGEDGFKMLELPYGVSISFIIKSQVVPEMG  340 (342)
Q Consensus       308 y~~~~~l~~~vLELPY~~~~SMlI~~~ILP~~g  340 (342)
                      |+++++++++||||||++++||+|   |||+++
T Consensus       289 y~~~~~l~~~vleLPY~~~~sm~i---iLP~~~  318 (453)
T 2wxw_A          289 HWSDIQDNFSVTQVPFTESACLLL---IQPHYA  318 (453)
T ss_dssp             EECCTTTTEEEEECCBTTTEEEEE---EEESSC
T ss_pred             eEEecCCCeEEEEEecCCcEEEEE---EeCCCC
Confidence            999999999999999944799999   899986


No 42 
>2r9y_A Alpha-2-antiplasmin; inhibitory serpin, plasmin inhibitor, AC phase, glycoprotein, protease inhibitor, secreted, serine P inhibitor, sulfation; 2.65A {Mus musculus}
Probab=100.00  E-value=3.2e-48  Score=385.74  Aligned_cols=224  Identities=24%  Similarity=0.420  Sum_probs=200.4

Q ss_pred             ccccccccccccccccccCCcchhhhhhhhhhhhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCccc
Q psy2651          81 FSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSET  159 (342)
Q Consensus        81 ~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~  159 (342)
                      ++++.+ +||++||+                 ++.+. +++|+||||+||+.+|+|+++||+|+|++||.++||++... 
T Consensus        21 l~~~~~-~Fa~~L~k-----------------~l~~~~~~~Niv~SP~SI~~aLaml~~GA~G~T~~eL~~~L~~~~~~-   81 (430)
T 2r9y_A           21 LAQAMM-AFTTDLFS-----------------LVAQTSTSSNLVLSPLSVALALSHLALGAQNQTLHSLHRVLHMNTGS-   81 (430)
T ss_dssp             HHHHHH-HHHHHHHH-----------------HHHHHCCSSSEEECHHHHHHHHHHHHHHCCHHHHHHHHHHTTCCTTS-
T ss_pred             HHHHHH-HHHHHHHH-----------------HHHhcCCCCCEEECHHHHHHHHHHHHhhcCcHHHHHHHHHhCCCcHH-
Confidence            344555 99999999                 88766 78999999999999999999999999999999999997543 


Q ss_pred             chhcccchhHHHHHHHHHHHHHhCCCcchhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhchhhhc
Q psy2651         160 LLKDYKGIIDQLSKDYKGIIDQLSKSPELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMNDWVSN  239 (342)
Q Consensus       160 ~~~~~~~~~~~v~~~~~~l~~~l~~~~~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~WV~~  239 (342)
                       +         ++..++.+...+.. ..+.+||+||+++++++.++|++.++++|++++..+||. +.++++.||+||++
T Consensus        82 -~---------~~~~~~~l~~~~~~-~~L~~An~l~~~~~~~l~~~F~~~~~~~y~a~~~~~d~~-~~~a~~~IN~WV~~  149 (430)
T 2r9y_A           82 -C---------LPHLLSHFYQNLGP-GTIRLAARIYLQKGFPIKDDFLEQSERLFGAKPVKLTGK-QEEDLANINQWVKE  149 (430)
T ss_dssp             -C---------HHHHHHHHHHTSCS-SSEEEEEEEEECTTCCCCHHHHHHHHHHHSSCCEECCSC-HHHHHHHHHHHHHH
T ss_pred             -H---------HHHHHHHHHhhccC-ceEEeeehhhhhCCCcccHHHHHHHHHHhCCceeecCCC-cHHHHHHHHHHHHH
Confidence             3         77778877765532 289999999999999999999999999999999999864 56688899999999


Q ss_pred             ccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeEEEeCCCCeEEE
Q psy2651         240 HTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDGFKML  319 (342)
Q Consensus       240 ~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y~~~~~l~~~vL  319 (342)
                      +|+|+|+++++  +++++|+++|+|||||||.|+++|++..|++++|+..+|++++||||++.+..|+|++.++++++||
T Consensus       150 ~T~gkI~~ll~--~l~~~T~lvLvNAiyFKg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~~~~~~~~~~l~~~vl  227 (430)
T 2r9y_A          150 ATEGKIEDFLS--ELPDSTVLLLLNAIHFHGFWRTKFDPSLTQKDFFHLDERFTVSVDMMHAVSYPLRWFLLEQPEIQVA  227 (430)
T ss_dssp             HTTTSCCCCCC--CCCSSCSEEEEEEEEEECCEEECCCGGGCEEEEEESSSSEEEEEEEEEEEEEEEEEEEETTTTEEEE
T ss_pred             hcCCCccchhh--ccCcccceeEeeeeEEecccCCCCCCCCcccceEEecCCeEEEEEeeeecccceeEEEecCCcEEEE
Confidence            99999999996  7999999999999999999999999999999999999999999999999863388999999999999


Q ss_pred             EEeCCCcEEEEEeecCCCCCC
Q psy2651         320 ELPYGVSISFIIKSQVVPEMG  340 (342)
Q Consensus       320 ELPY~~~~SMlI~~~ILP~~g  340 (342)
                      ||||.+++||+|   |||+++
T Consensus       228 eLPY~~~~SM~i---iLP~~~  245 (430)
T 2r9y_A          228 HFPFKNNMSFVV---VMPTYF  245 (430)
T ss_dssp             EEEBSSSEEEEE---EEESSS
T ss_pred             EeecCCCEEEEE---EecCCC
Confidence            999933599999   899875


No 43 
>1f0c_A ICE inhibitor; apoptosis, caspase inhibitor, protease inhibitor, serpin, viral protein; 2.26A {Cowpox virus} SCOP: e.1.1.1 PDB: 1c8o_A
Probab=100.00  E-value=1.7e-47  Score=365.13  Aligned_cols=194  Identities=33%  Similarity=0.525  Sum_probs=173.2

Q ss_pred             hhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcccchhcccchhHHHHHHHHHHHHHhCCCc-chhh
Q psy2651         113 NLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKDYKGIIDQLSKSP-ELKI  190 (342)
Q Consensus       113 ~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~~~~~~~~~~~~~v~~~~~~l~~~l~~~~-~l~~  190 (342)
                      ++.+. +++|+||||+||+.+|+|+++||+|+|++||.++||++...  +         +             .. .+.+
T Consensus         6 ~l~~~~~~~N~~~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~--~---------~-------------~~l~l~~   61 (305)
T 1f0c_A            6 EIASSMKGENVFISPPSISSVLTILYYGANGSTAEQLSKYVEKEADK--N---------K-------------DDISFKS   61 (305)
T ss_dssp             HHHHTTTTSCEEECHHHHHHHHHHHHHHCCTHHHHHHHTTC---------------------------------CCSEEE
T ss_pred             HHhccCCCCCEEEchHHHHHHHHHHHHhcCChHHHHHHHHhCCCCcc--c---------c-------------chhhhhh
Confidence            88776 78999999999999999999999999999999999986432  1         3             12 4599


Q ss_pred             hhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhchhhhcccCCccccCCCCCCCCcccceeeeeeccccc
Q psy2651         191 ANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMNDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKG  270 (342)
Q Consensus       191 an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg  270 (342)
                      ||+||+++++++.++|.+.++++|    +.+||.++ ++++.||+||+++|+|+|+++++ ..++.+|+++|+||+||||
T Consensus        62 an~l~~~~~~~l~~~f~~~~~~~y----~~vdF~~~-~a~~~IN~WV~~~T~g~I~~l~~-~~~~~~t~lvLvNaiyFkg  135 (305)
T 1f0c_A           62 MNKVYGRYSAVFKDSFLRKIGDNF----QTVDFTDC-RTVDAINKCVDIFTEGKINPLLD-EPLSPDTCLLAISAVYFKA  135 (305)
T ss_dssp             EEEEEEETTSCBCHHHHHHHGGGE----EEECSSST-HHHHHHHHHHHHHTTTSSCCSCC-SCCCTTEEEEEEEEEEEEE
T ss_pred             eeeEEEeCCCcHHHHHHHHHHHHh----hccCCCCH-HHHHHHHHHHHHHhCCCcccccc-CCCCCCceeeeeehHhhhh
Confidence            999999999999999999999999    89999988 89999999999999999999993 1355669999999999999


Q ss_pred             cccccCCCCCCcccCeeecCCCeEEEeeeeecc-eeeeEEEeCCC--CeEEEEEeC-CCcEEEEEeecCCCCCCC
Q psy2651         271 KWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKD-SFYMYEEAGED--GFKMLELPY-GVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       271 ~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~-~~f~y~~~~~l--~~~vLELPY-~~~~SMlI~~~ILP~~g~  341 (342)
                      .|+++|++..|++++||..+|++++||||++.+ . |+|++++++  +++|||||| |+ +||+|   |||++++
T Consensus       136 ~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~-~~y~~~~~~~~~~~vleLPy~~~-~sm~i---iLP~~~~  205 (305)
T 1f0c_A          136 KWLMPFEKEFTSDYPFYVSPTEMVDVSMMSMYGEA-FNHASVKESFGNFSIIELPYVGD-TSMVV---ILPDNID  205 (305)
T ss_dssp             EBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEEE-EEEEEECCTTCCEEEEEEEBSSS-EEEEE---EEESSTT
T ss_pred             hhhccCCcccCeecEEEECCCEEEEEEEEEecCcc-eeeEEcccccCCCEEEEEeCCCC-EEEEE---EeCCCCC
Confidence            999999999999999999999999999999999 8 999999999  999999999 77 99999   8999863


No 44 
>2oay_A C1-inhibitor, plasma protease C1 inhibitor, C1 INH, C1INH; latent serpin, RCL insertion, immune system,hydrolase inhibi; HET: NAG; 2.35A {Homo sapiens}
Probab=100.00  E-value=2.2e-47  Score=375.81  Aligned_cols=218  Identities=26%  Similarity=0.402  Sum_probs=188.2

Q ss_pred             ccccccccccccccccccCCcchhhhhhhhhhhhhc-c-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651          81 FSSILDQRFNGKLHKKEDFKPFSIQLSTLVEWNLAA-N-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus        81 ~~~~~~~~Fa~~L~~~~~~~~~~~~~~~~~~~~l~~-~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      ++++.+ +||++||+                 ++.+ . +++|+||||+||+.+|+|+++||+|+|++||.++||++...
T Consensus        32 l~~~~~-~Fa~~L~~-----------------~l~~~~~~~~Niv~SP~SI~~aLaml~~GA~g~T~~el~~~L~~~~~~   93 (390)
T 2oay_A           32 LGDALV-DFSLKLYH-----------------AFSAMKKVETNMAFSPFSIASLLTQVLLGAGENTKTNLESILSYPKDF   93 (390)
T ss_dssp             HHHHHH-HHHHHHHH-----------------HHCC----CCCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHHTCCTTC
T ss_pred             HHHHHH-HHHHHHHH-----------------HHHhccCCCCCEEECHHHHHHHHHHHHhhcccHHHHHHHHHhCCCCcH
Confidence            345556 99999999                 8864 2 68899999999999999999999999999999999997643


Q ss_pred             cchhcccchhHHHHHHHHHHHHHhCCCcchhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhchhhh
Q psy2651         159 TLLKDYKGIIDQLSKDYKGIIDQLSKSPELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMNDWVS  238 (342)
Q Consensus       159 ~~~~~~~~~~~~v~~~~~~l~~~l~~~~~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~WV~  238 (342)
                       .+         ++..++.+    .. ..+.+||+||+++++++.++|++.++++|+++++.+|+ ++.++++.||+||+
T Consensus        94 -~~---------i~~~~~~l----~~-~~l~~an~l~~~~~~~l~~~F~~~~~~~y~a~~~~~~~-~~~~a~~~IN~WV~  157 (390)
T 2oay_A           94 -TC---------VHQALKGF----TT-KGVTSVSQIFHSPDLAIRDTFVNASRTLYSSSPRVLSN-NSDANLELINTWVA  157 (390)
T ss_dssp             -TT---------HHHHHHTT----CC-SSEEEEEEEEECTTSCCCHHHHHHHHHHHSCCCEECCS-CHHHHHHHHHHHHH
T ss_pred             -HH---------HHHHHHHH----hh-CchhhhhhHhHhcCCcccHHHHHHHHHHhCceeeeccC-ChHHHHHHHHHHHH
Confidence             23         66666543    22 26889999999999999999999999999999999995 56678899999999


Q ss_pred             cccCCccccCCCCCCCCcccceeeeeeccccccccccCCCCCCcccCeeecCCCeEEEeeeeecceeeeE--EEeCCCCe
Q psy2651         239 NHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMFVKDSFYMY--EEAGEDGF  316 (342)
Q Consensus       239 ~~T~g~I~~ll~~~~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~~~~~~f~y--~~~~~l~~  316 (342)
                      ++|+|+|+++++  +++++|+++|+||+||||.|+++|++.+|++++|+.. +.+++||||++. . ++|  .+++++++
T Consensus       158 ~~T~gkI~~ll~--~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~-~~~v~V~mM~~~-~-~~~~~~~~~~l~~  232 (390)
T 2oay_A          158 KNTNNKISRLLD--SLPSDTRLVLLNAIYLSAKWKTTFDPKKTRMEPFHFK-NSVIKVPMMNSK-K-YPVAHFIDQTLKA  232 (390)
T ss_dssp             HTTTTSCSCSCS--CCCTTCCEEEEEEEEEEEEBSSCCCTTSCEEEEECC---CCEEEEEEEEE-E-EEEEEEEETTTTE
T ss_pred             HhhCCccccccc--ccCcccceEEEeeEEEecccCCCCCccccEEeeeEEC-CceEEEEEEEeC-c-eeEEEEecccCce
Confidence            999999999996  7999999999999999999999999999999999995 567899999986 4 554  45678899


Q ss_pred             EEEEEeCCCcEEEEEeecCCCCCC
Q psy2651         317 KMLELPYGVSISFIIKSQVVPEMG  340 (342)
Q Consensus       317 ~vLELPY~~~~SMlI~~~ILP~~g  340 (342)
                      +|+||||++++||+|   |||+++
T Consensus       233 ~vleLpy~~~~sm~i---iLP~~~  253 (390)
T 2oay_A          233 KVGQLQLSHNLSLVI---LVPQNL  253 (390)
T ss_dssp             EEEEEEBSTTEEEEE---EEESST
T ss_pred             EEEEEecCCcEEEEE---EeCCcc
Confidence            999999955899999   899974


No 45 
>1m93_B Serine proteinase inhibitor 2; serpin, CRMA, apoptosis, ICE inhibitor, viral protein; 1.65A {Cowpox virus} SCOP: e.1.1.1
Probab=100.00  E-value=1.4e-35  Score=274.43  Aligned_cols=144  Identities=32%  Similarity=0.559  Sum_probs=135.9

Q ss_pred             chhhhhhhhhccCcccchHHHHHhhhhcccccEEecCCCcHHHHHhhchhhhcccCCccccCCCCCCCCcccceeeeeec
Q psy2651         187 ELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMNDWVSNHTNDKIKDLIKADSLDASTKLVLINAI  266 (342)
Q Consensus       187 ~l~~an~lfv~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~a~~~IN~WV~~~T~g~I~~ll~~~~i~~~t~lvLvNai  266 (342)
                      .+++||+||++++++++++|.+.++++|.    .+||.+ +.+++.||+||+++|+|+|+++++++ ++++|+++|+||+
T Consensus         3 ~l~~an~l~~~~~~~l~~~f~~~~~~~~~----~vdF~~-~~a~~~IN~WV~~~T~gkI~~ll~~~-l~~~t~lvLvNai   76 (245)
T 1m93_B            3 SFKSMNKVYGRYSAVFKDSFLRKIGDNFQ----TVDFTD-SRTVDAINKSVDIFTEGKINPLLDEP-LSPDTSLLAISAV   76 (245)
T ss_dssp             SEEEEEEEEEETTSCBCHHHHHHHCSCEE----EECTTS-THHHHHHHHHHHHHTTTSSCCSCCSC-CCTTCCEEEEEEE
T ss_pred             EEEeEeeeeeeCCCCcCHHHHHHHHHHHH----hcCCCC-HHHHHHHHHHHHHHhcCchhhhcCCC-CCCCceEEEEEee
Confidence            57899999999999999999999998874    799998 77889999999999999999999876 9999999999999


Q ss_pred             cccccccccCCCCCCcccCeeecCCCeEEEeeee-ecceeeeEEEeCCC--CeEEEEEeC-CCcEEEEEeecCCCCCCC
Q psy2651         267 HFKGKWTVPFKPEATKDGPFYLDDTNSVQVPLMF-VKDSFYMYEEAGED--GFKMLELPY-GVSISFIIKSQVVPEMGR  341 (342)
Q Consensus       267 yFkg~W~~~F~~~~T~~~~F~~~~g~~~~VpMM~-~~~~~f~y~~~~~l--~~~vLELPY-~~~~SMlI~~~ILP~~g~  341 (342)
                      ||||.|+++|++..|++++||..+|+.++||||+ +.+. |+|++++++  +++|||||| ++ +||+|   |||+++.
T Consensus        77 yFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~-~~~~~~~~l~~~~~vleLPy~~~-~sm~i---iLP~~~~  150 (245)
T 1m93_B           77 YFKAKWLMPFEKEFTSDYPFYVSPTEMVDVSMMSMYGEA-FNHASVKESFGNFSIIELPYVGD-TSMVV---ILPDNID  150 (245)
T ss_dssp             EEEEEBSSCCCGGGCEEEEEEEETTEEEEEEEEEECSCE-EEEEEECCTTCCEEEEEEEBSSS-EEEEE---EEESSTT
T ss_pred             eeechhcCCCCcccCceeeEEecCCcEEEEeeeeeccCc-eeEEEecccccCCEEEEEecCCC-eEEEE---EecCCCC
Confidence            9999999999999999999999999999999999 9998 999999999  999999999 77 99999   8999863


No 46 
>1m93_A Serine proteinase inhibitor 2; serpin, CRMA, apoptosis, ICE inhibitor, viral protein; 1.65A {Cowpox virus} SCOP: e.1.1.1
Probab=99.38  E-value=1.4e-13  Score=97.94  Aligned_cols=46  Identities=39%  Similarity=0.524  Sum_probs=37.8

Q ss_pred             hhhcc-CCCCEEEChhhHHHHHHHHHccCChhHHHHHHHHcCCCCcc
Q psy2651         113 NLAAN-KKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSE  158 (342)
Q Consensus       113 ~l~~~-~~~Niv~SP~sI~~aLamL~~GA~G~T~~qL~~~Lgl~~~~  158 (342)
                      ++.+. +++|+||||+||+.+|+|++.||+|+|++||.++|+++..+
T Consensus         6 ~l~~~~~~~Ni~~SP~Si~~aLaml~~GA~g~T~~ql~~~L~~~~~~   52 (55)
T 1m93_A            6 EIASSMKGENVFISPPSISSVLTILYYGANGSTAEQLSKYVEKEADK   52 (55)
T ss_dssp             HHHHHTTTSCEEECHHHHHHHHHHHHHHCCHHHHHHHHTTC------
T ss_pred             HHHhcCCCCCEEECHHHHHHHHHHHHhhccchHHHHHHHHhCCCccc
Confidence            77665 78899999999999999999999999999999999997654


No 47 
>1je8_A Nitrate/nitrite response regulator protein NARL; protein-DNA complex, two-component response regulator, helix-turn-helix, DNA bending; 2.12A {Escherichia coli} SCOP: a.4.6.2 PDB: 1zg1_A 1zg5_A
Probab=23.72  E-value=53  Score=23.57  Aligned_cols=35  Identities=17%  Similarity=0.294  Sum_probs=28.4

Q ss_pred             CChhHHHHHHHHcCCCCcccchhcccchhHHHHHHHHHHHHHhCCCc
Q psy2651         140 AAGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKDYKGIIDQLSKSP  186 (342)
Q Consensus       140 A~G~T~~qL~~~Lgl~~~~~~~~~~~~~~~~v~~~~~~l~~~l~~~~  186 (342)
                      ..|.|.+||.+.||++...            |....+.+...+...+
T Consensus        34 ~~g~s~~eIA~~l~is~~t------------V~~~l~r~~~kL~~~~   68 (82)
T 1je8_A           34 AQGLPNKMIARRLDITEST------------VKVHVKHMLKKMKLKS   68 (82)
T ss_dssp             TTTCCHHHHHHHHTSCHHH------------HHHHHHHHHHHTTCSS
T ss_pred             HcCCCHHHHHHHHCcCHHH------------HHHHHHHHHHHHcCCC
Confidence            6889999999999987554            7788888888876654


No 48 
>3ulq_B Transcriptional regulatory protein COMA; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} PDB: 2krf_A
Probab=23.46  E-value=70  Score=23.54  Aligned_cols=34  Identities=15%  Similarity=0.323  Sum_probs=27.7

Q ss_pred             ChhHHHHHHHHcCCCCcccchhcccchhHHHHHHHHHHHHHhCCCc
Q psy2651         141 AGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKDYKGIIDQLSKSP  186 (342)
Q Consensus       141 ~G~T~~qL~~~Lgl~~~~~~~~~~~~~~~~v~~~~~~l~~~l~~~~  186 (342)
                      .|.|.+||.+.||++...            |....+.++..+.-.+
T Consensus        43 ~G~s~~eIA~~L~iS~~T------------V~~~~~~i~~Klgv~~   76 (90)
T 3ulq_B           43 KGFTNQEIADALHLSKRS------------IEYSLTSIFNKLNVGS   76 (90)
T ss_dssp             TTCCHHHHHHHHTCCHHH------------HHHHHHHHHHHTTCSS
T ss_pred             cCCCHHHHHHHHCcCHHH------------HHHHHHHHHHHHCCCC
Confidence            889999999999987654            8888888888876544


Done!