RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2651
(342 letters)
>d1uhga_ e.1.1.1 (A:) Ovalbumin {Hen (Gallus gallus) [TaxId: 9031]}
Length = 385
Score = 144 bits (363), Expect = 1e-40
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 9/225 (4%)
Query: 115 AANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETL---LKDYKGIIDQL 171
+ EN P ++ L + GA ST + K +R ++ G +
Sbjct: 20 VHHANENIFYCPIAIMSALAMVYLGAKDSTRTQINKVVRFDKLPGFGDSIEAQCGTSVNV 79
Query: 172 SKDYKGIIDQLSKS---PELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPP- 227
+ I++Q++K +A+++Y + + P Y + + L ++F
Sbjct: 80 HSSLRDILNQITKPNDVYSFSLASRLYAEERYPILPEYLQCVKELYRGGLEPINFQTAAD 139
Query: 228 AAAKEMNDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFY 287
A + +N WV + TN I+++++ S+D+ T +VL+NAI FKG W FK E T+ PF
Sbjct: 140 QARELINSWVESQTNGIIRNVLQPSSVDSQTAMVLVNAIVFKGLWEKAFKDEDTQAMPFR 199
Query: 288 LDDTNSVQVPLMFVKDSFYMYEEAGEDGFKMLELPY-GVSISFII 331
+ + S V +M+ F + A + K+LELP+ ++S ++
Sbjct: 200 VTEQESKPVQMMYQIGLFRVASMA-SEKMKILELPFASGTMSMLV 243
>d1k9oi_ e.1.1.1 (I:) Alaserpin (serpin 1) {Tobacco hornworm
(Manduca sexta) [TaxId: 7130]}
Length = 376
Score = 142 bits (358), Expect = 7e-40
Identities = 70/218 (32%), Positives = 113/218 (51%), Gaps = 11/218 (5%)
Query: 115 AANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKD 174
AN +N ++S FS+ LG + + G + + +++ L + + + + +
Sbjct: 26 KANPGQNVVLSAFSVLPPLGQLALASVGESHDELLRALALPNDNVTKDVFADLNRGVRAV 85
Query: 175 YKGIIDQLSKSPELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMN 234
K +LK+A+KIY AK +ELN + + D F SE+ VDF + AA +N
Sbjct: 86 ---------KGVDLKMASKIYVAKGLELNDDFAAVSRDVFGSEVQNVDFVKSVEAAGAIN 136
Query: 235 DWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSV 294
WV + TN++IK+L+ D+LD +T+ VL+NAI+FKG W F E T D F++ ++
Sbjct: 137 KWVEDQTNNRIKNLVDPDALDETTRSVLVNAIYFKGSWKDKFVKERTMDRDFHVSKDKTI 196
Query: 295 QVPLMFVKDSFYMYEEAGEDGFKMLELPY-GVSISFII 331
+VP M K + E KM+E+ Y G S II
Sbjct: 197 KVPTMIGKKDVRYADVP-ELDAKMIEMSYEGDQASMII 233
>d1lj5a_ e.1.1.1 (A:) Plasminogen activator inhibitor-1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 379
Score = 141 bits (355), Expect = 2e-39
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 10/220 (4%)
Query: 115 AANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKD 174
A+K N + SP+ + VL + G T + + + K + KG+ L
Sbjct: 25 QASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDD------KGMAPALRHL 78
Query: 175 YKGIIDQLSKSPELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMN 234
YK + E+ + I+ +D++L + F S + +VDFS+ A +N
Sbjct: 79 YK-ELMGPWNKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIIN 137
Query: 235 DWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSV 294
DWV HT I +L+ ++D T+LVL+NA++F G+W PF +T F+ D ++V
Sbjct: 138 DWVKTHTKGMISNLLGKGAVDQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTV 197
Query: 295 QVPLMFVKDSFYMYE--EAGEDGFKMLELPY-GVSISFII 331
VP+M + F E + +LELPY G ++S I
Sbjct: 198 SVPMMAQTNKFNYTEFTTPDGHYYDILELPYHGDTLSMFI 237
>d1by7a_ e.1.1.1 (A:) Plasminogen activator inhibitor-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 381
Score = 138 bits (348), Expect = 2e-38
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 12/221 (5%)
Query: 115 AANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKD 174
A+ +N +SP+S+ + + G+ GST + M K L+ + D++
Sbjct: 20 KASPTQNLFLSPWSISSTMAMVYMGSRGSTEDQMAKVLQ-------FNEVGAAADKIHSS 72
Query: 175 YKGIIDQLSKS---PELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPP-AAA 230
++ + ++ S L+ NK++ K Y ++SE VDF + A
Sbjct: 73 FRSLSSAINASTGNYLLESVNKLFGEKSASFREEYIRLCQKYYSSEPQAVDFLECAEEAR 132
Query: 231 KEMNDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDD 290
K++N WV T KI +L+ S+D T++VL+NA++FKGKW PF+ + PF ++
Sbjct: 133 KKINSWVKTQTKGKIPNLLPEGSVDGDTRMVLVNAVYFKGKWKTPFEKKLNGLYPFRVNS 192
Query: 291 TNSVQVPLMFVKDSFYMYEEAGEDGFKMLELPYGVSISFII 331
V +M++++ + + ++LELPY +S +
Sbjct: 193 AQRTPVQMMYLREKLNIGYIE-DLKAQILELPYAGDVSMFL 232
>g1hle.1 e.1.1.1 (A:,B:) Elastase inhibitor {Horse (Equus caballus)
[TaxId: 9796]}
Length = 375
Score = 138 bits (347), Expect = 3e-38
Identities = 68/210 (32%), Positives = 102/210 (48%), Gaps = 10/210 (4%)
Query: 115 AANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKD 174
++ N ISP S+ L + G G+TA + K L E + ++ + ++K
Sbjct: 21 ESDPTGNIFISPLSISSALAMIFLGTRGNTAAQVSKALYFDTVEDIHSRFQSLNADINKP 80
Query: 175 YKGIIDQLSKSPELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPA-AAKEM 233
LK+AN++Y K + + +EL VDF Q P A KE+
Sbjct: 81 --------GAPYILKLANRLYGEKTYNFLADFLASTQKMYGAELASVDFQQAPEDARKEI 132
Query: 234 NDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNS 293
N+WV T KI +L+ +D TKLVL+NAI+FKG W F EAT+D PF L+ ++
Sbjct: 133 NEWVKGQTEGKIPELLVKGMVDNMTKLVLVNAIYFKGNWQQKFMKEATRDAPFRLNKKDT 192
Query: 294 VQVPLMFVKDSFYMYEEAGEDGFKMLELPY 323
V +M+ K F Y + ++LELPY
Sbjct: 193 KTVKMMYQKKKFP-YNYIEDLKCRVLELPY 221
>g1jjo.1 e.1.1.1 (A:,C:,E:) Neuroserpin {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 334
Score = 134 bits (339), Expect = 2e-37
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 48/223 (21%)
Query: 115 AANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKD 174
+ EN + SP S+ + +G+ GA
Sbjct: 15 GTGEDENILFSPLSIALAMGMMELGAENQYV----------------------------- 45
Query: 175 YKGIIDQLSKSPELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMN 234
+K+AN ++ +N + FN+E+ VDFSQ A A +N
Sbjct: 46 -------------MKLANSLFVQNGFHVNEEFLQMLKMYFNAEVNHVDFSQNVAVANSIN 92
Query: 235 DWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSV 294
WV N+TN +KDL+ + D T L LINA++FKG W F+PE T+ F DD + V
Sbjct: 93 KWVENYTNSLLKDLVSPEDFDGVTNLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEV 152
Query: 295 QVPLMFVKDSFYMYE-----EAGEDGFKMLELPY-GVSISFII 331
Q+P+M+ + FY E +++LE+PY G IS ++
Sbjct: 153 QIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMML 195
>d2b5ti1 e.1.1.1 (I:6-431) Antithrombin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 426
Score = 135 bits (340), Expect = 7e-37
Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 8/232 (3%)
Query: 102 FSIQLSTLVEWNLAANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLL 161
F+ + N +N +SP S+ + GA T + +M+ +
Sbjct: 53 FATTF--YQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKT 110
Query: 162 KDYKGIIDQLSKDYKGIIDQLSKSPELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKV 221
D I +K + + +K+ +L AN+++ K + N YQ + + ++L +
Sbjct: 111 SDQ--IHFFFAKLNCRLYRKANKASKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPL 168
Query: 222 DFSQPPA-AAKEMNDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEA 280
DF + + +N WVSN T +I D+I +++++ T LVL+N I+FKG W F PE
Sbjct: 169 DFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPEN 228
Query: 281 TKDGPFYLDDTNSVQVPLMFVKDSFYMYEEAGEDGFKMLELPY-GVSISFII 331
T+ FY D S +M+ + F +G ++LELP+ G I+ ++
Sbjct: 229 TRKELFYKADGESCSASMMYQEGKFRYRRV--AEGTQVLELPFKGDDITMVL 278
>g1as4.1 e.1.1.1 (A:,B:) Antichymotrypsin, alpha-1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 369
Score = 131 bits (331), Expect = 4e-36
Identities = 69/217 (31%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 115 AANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKD 174
+N I SP S+ L S GA +T ++KGL+ +ET + I Q +
Sbjct: 19 LKAPDKNVIFSPLSISTALAFLSLGAHNTTLTEILKGLKFNLTETSEAE----IHQSFQH 74
Query: 175 YKGIIDQLSKSPELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMN 234
++Q S +L + N ++ + + L + A + SE DF AA K +N
Sbjct: 75 LLRTLNQSSDELQLSMGNAMFVKEQLSLLDRFTEDAKRLYGSEAFATDFQDSAAAKKLIN 134
Query: 235 DWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSV 294
D+V N T KI DLIK LD+ T +VL+N I FK KW +PF P+ T FYL V
Sbjct: 135 DYVKNGTRGKITDLIK--DLDSQTMMVLVNYIFFKAKWEMPFDPQDTHQSRFYLSKKKWV 192
Query: 295 QVPLMFVKDSFYMYEEAGEDGFKMLELPYGVSISFII 331
VP+M + Y E ++EL Y + S +
Sbjct: 193 MVPMMSLHHLTIPYFRDEELSCTVVELKYTGNASALF 229
>d1xqga_ e.1.1.1 (A:) Maspin {Human (Homo sapiens) [TaxId: 9606]}
Length = 378
Score = 130 bits (327), Expect = 2e-35
Identities = 52/219 (23%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 115 AANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKD 174
N + SP +L L LA GA G TA + + L ++ + + ++ + ++
Sbjct: 24 EKEPLGNVLFSPIALSTSLSLAQVGAKGDTANEIGQVLHFENVKDVPFGFQTVTSDVN-- 81
Query: 175 YKGIIDQLSKSPELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPA-AAKEM 233
+LS LK+ ++Y K + L+ + + + EL VDF ++
Sbjct: 82 ------KLSSFYSLKLIKRLYVDKSLNLSTEFISSTKRPYAKELETVDFKDKLEETKGQI 135
Query: 234 NDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNS 293
N+ + + T+ ++++ +S++ TK++++NA +F GKW F TK+ PF ++ T++
Sbjct: 136 NNSIKDLTDGHFENILADNSVNDQTKILVVNAAYFVGKWMKKFSESETKESPFRVNKTDT 195
Query: 294 VQVPLMFVKDSFYMYEEAGEDGFKMLELPY-GVSISFII 331
V +M ++ +F M K++ELP+ +S I
Sbjct: 196 KPVQMMNMEATFSMGNID-SINSKIIELPFQNKHLSMFI 233
>g1lq8.1 e.1.1.1 (A:,B:) Protein C inhibitor {Human (Homo sapiens)
[TaxId: 9606]}
Length = 358
Score = 128 bits (323), Expect = 5e-35
Identities = 54/228 (23%), Positives = 112/228 (49%), Gaps = 10/228 (4%)
Query: 115 AANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKD 174
+A +N SP S+ + L + S GA ST +++GL + ++ K+ QL ++
Sbjct: 14 SAAPSQNIFFSPVSISMSLAMLSLGAGSSTKMQILEGLGLNLQKSSEKELHRGFQQLLQE 73
Query: 175 YKGIIDQLSKSPELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMN 234
++Q +L + N ++ ++L + + + ++ +F A K++N
Sbjct: 74 ----LNQPRDGFQLSLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRDSAGAMKQIN 129
Query: 235 DWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSV 294
D+V+ T KI DL+K +LD++ ++++N I FK KW F + T++ FY+ V
Sbjct: 130 DYVAKQTKGKIVDLLK--NLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVV 187
Query: 295 QVPLMFVKDSFYMYEEAGEDGFKMLELPYGVSISFIIKSQVVPEMGRL 342
+VP M ++ Y Y +++ +PY + + + ++P G++
Sbjct: 188 RVP-MMSREDQYHYLLDRNLSCRVVGVPYQGNATALF---ILPSEGKM 231
>d1qlpa_ e.1.1.1 (A:) Antitrypsin, alpha-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 372
Score = 126 bits (318), Expect = 4e-34
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 7/217 (3%)
Query: 115 AANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKD 174
+ N SP S+ + S G T + +++GL +E +L +
Sbjct: 21 HQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRT 80
Query: 175 YKGIIDQLSKSPELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMN 234
Q +L N ++ ++ ++L + ++SE V+F A K++N
Sbjct: 81 LN----QPDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQIN 136
Query: 235 DWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSV 294
D+V T KI DL+K LD T L+N I FKGKW PF+ + T++ F++D +V
Sbjct: 137 DYVEKGTQGKIVDLVK--ELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTV 194
Query: 295 QVPLMFVKDSFYMYEEAGEDGFKMLELPYGVSISFII 331
+VP+M F + + +L + Y + + I
Sbjct: 195 KVPMMKRLGMFNIQ-HCKKLSSWVLLMKYLGNATAIF 230
>d1imva_ e.1.1.1 (A:) Pigment epithelium-derived factor, PEDF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 126 bits (317), Expect = 6e-34
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 13/218 (5%)
Query: 115 AANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKD 174
+ + N ++SP S+ L S GA T + + L + +
Sbjct: 36 SMSPTTNVLLSPLSVATALSALSLGADERTESIIHRALYYDLISS---------PDIHGT 86
Query: 175 YKGIIDQL-SKSPELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEM 233
YK ++D + + LK A++I F K + + ++ ++ + +V P +E+
Sbjct: 87 YKELLDTVTAPQKNLKSASRIVFEKKLRIKSSFVAPLEKSYGTRP-RVLTGNPRLDLQEI 145
Query: 234 NDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNS 293
N+WV K+ + ++L+ HFKG+W F T FYLD+ +
Sbjct: 146 NNWVQAQMKGKLARST--KEIPDEISILLLGVAHFKGQWVTKFDSRKTSLEDFYLDEERT 203
Query: 294 VQVPLMFVKDSFYMYEEAGEDGFKMLELPYGVSISFII 331
V+VP+M + Y + K+ +LP S+S I
Sbjct: 204 VRVPMMSDPKAVLRYGLDSDLSCKIAQLPLTGSMSIIF 241
>g1mtp.1 e.1.1.1 (A:,B:) Thermopin {Thermobifida fusca [TaxId:
2021]}
Length = 355
Score = 119 bits (300), Expect = 9e-32
Identities = 42/218 (19%), Positives = 88/218 (40%), Gaps = 20/218 (9%)
Query: 115 AANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKD 174
A I SP+S+ LG+ + GA +T + L + L
Sbjct: 21 EAVPDGEVIWSPYSVACALGVLAAGARATTRTELTTLLGTDPAPLL-------------- 66
Query: 175 YKGIIDQLSKSPELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAA-KEM 233
+ ++ SP+L ++ + D+ + +++ D +S++ DF P +
Sbjct: 67 -AALDRAVTDSPDLASRTVLWVSADVPVRSSFRATMHDRPDSDVRTADFRTNPEGVRATV 125
Query: 234 NDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNS 293
N +++ T I++L+ ++ + +L NA+ K +WT PF+ T++G F
Sbjct: 126 NADIADATRGMIRELLPQGAVTPDLRAILTNALWAKARWTTPFEAHLTREGTFRTPR-GP 184
Query: 294 VQVPLMFVKDSFYMYEEAGEDGFKMLELPYGVSISFII 331
+VP M + G++M+ L ++ +
Sbjct: 185 KRVPFMHRTKTMPYAT---ARGWRMVTLHAHDELAVDV 219
>d1jmja_ e.1.1.1 (A:) Heparin cofactor II (Hc-II, leuserpin 2)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 420
Score = 119 bits (300), Expect = 3e-31
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 9/219 (4%)
Query: 116 ANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKDY 175
N +N I+P + +G+ S G G T E + L K Y+ I + +
Sbjct: 66 VNTFDNIFIAPVGISTAMGMISLGLKGETHEQVHSILHFKDFVNASSKYE--ITTIHNLF 123
Query: 176 KGIIDQLSKS---PELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKE 232
+ + +L + L+ N +Y K + ++T+ + + +E DFS P +K
Sbjct: 124 RKLTHRLFRRNFGYTLRSVNDLYIQKQFPILLDFKTKVREYYFAEAQIADFSDPAFISK- 182
Query: 233 MNDWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTN 292
N+ + T IKD + +++D +T+++++N I+FKG W F E T + F L++
Sbjct: 183 TNNHIMKLTKGLIKDAL--ENIDPATQMMILNCIYFKGSWVNKFPVEMTHNHNFRLNERE 240
Query: 293 SVQVPLMFVKDSFYMYEEAGEDGFKMLELPYGVSISFII 331
V+V +M K +F + E +L+L Y IS +I
Sbjct: 241 VVKVSMMQTKGNFLAANDQ-ELDCDILQLEYVGGISMLI 278
>g1m93.1 e.1.1.1 (A:,B:,C:) Viral serpin crmA (cytokine response
modifier protein) {Cowpox virus [TaxId: 10243]}
Length = 322
Score = 109 bits (273), Expect = 4e-28
Identities = 62/219 (28%), Positives = 93/219 (42%), Gaps = 40/219 (18%)
Query: 115 AANKKENAIISPFSLHVVLGLASFGAAGSTAEAMMKGLRIKHSETLLKDYKGIIDQLSKD 174
++ K EN ISP S+ VL + +GA GSTAE + K + I
Sbjct: 9 SSMKGENVFISPPSISSVLTILYYGANGSTAEQLSKYVDIS------------------- 49
Query: 175 YKGIIDQLSKSPELKIANKIYFAKDIELNPAYQTQAVDNFNSELGKVDFSQPPAAAKEMN 234
K NK+Y ++ + DNF + VDF+ +N
Sbjct: 50 -------------FKSMNKVYGRYSAVFKDSFLRKIGDNFQT----VDFTDSRTV-DAIN 91
Query: 235 DWVSNHTNDKIKDLIKADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLDDTNSV 294
V T KI L+ + L T L+ I+A++FK KW +PF+ E T D PFY+ T V
Sbjct: 92 KSVDIFTEGKINPLLD-EPLSPDTSLLAISAVYFKAKWLMPFEKEFTSDYPFYVSPTEMV 150
Query: 295 QVPLMFVKDSFYMYEEAGE--DGFKMLELPYGVSISFII 331
V +M + + + E F ++ELPY S ++
Sbjct: 151 DVSMMSMYGEAFNHASVKESFGNFSIIELPYVGDTSMVV 189
>d2gtta1 a.260.1.1 (A:6-448) Nucleoprotein {Rabies virus [TaxId:
11292]}
Length = 443
Score = 26.8 bits (59), Expect = 4.1
Identities = 6/22 (27%), Positives = 8/22 (36%), Gaps = 1/22 (4%)
Query: 40 YSALTTNFHLFFYCHSATSYCL 61
YS+ H+F H Y
Sbjct: 295 YSS-NAVGHVFNLIHFVGCYMG 315
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase
TrmB {Streptococcus pneumoniae [TaxId: 1313]}
Length = 204
Score = 26.4 bits (57), Expect = 4.8
Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 251 ADSLDASTKLVLINAIHFKGKWTVPFKPEATKDGPFYLD 289
+ L+A+ + V++N + K KW F D P +++
Sbjct: 3 TELLEANPQYVVLNPLEAKAKWRDLFG----NDNPIHVE 37
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase
{Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Length = 653
Score = 26.8 bits (59), Expect = 4.8
Identities = 19/102 (18%), Positives = 32/102 (31%), Gaps = 23/102 (22%)
Query: 174 DYKGIIDQLSKSPELKIANKIYFAKDIELNPAYQTQAVDNF----------NSELG-KVD 222
++ +ID L +L + + L+P N N ELG + +
Sbjct: 15 NFGDVIDNLWYFKDLGV-------SHLYLSPVLMASPGSNHGYDVIDHSRINDELGGEKE 67
Query: 223 FSQPPAAAKEMN-----DWVSNHTNDKIKDLIKADSLDASTK 259
+ + A + D V NH + D L K
Sbjct: 68 YRRLIETAHTIGLGIIQDIVPNHMAVNSLNWRLMDVLKMGKK 109
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea
[TaxId: 489]}
Length = 554
Score = 26.8 bits (58), Expect = 4.9
Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 24/87 (27%)
Query: 174 DYKGIIDQLSKSPELKIANKIYFAKDIELNPAYQT---------QAVDNF--NSELGKV- 221
D KG+ D++ EL + + L P ++ N LG +
Sbjct: 111 DLKGLKDKIPYFQELGL-------TYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIG 163
Query: 222 DFSQPPAAAKEMN-----DWVSNHTND 243
D + AA E D++ NHT++
Sbjct: 164 DLREVIAALHEAGISAVVDFIFNHTSN 190
>d1eg7a_ c.37.1.10 (A:) Formyltetrahydrofolate synthetase {Moorella
thermoacetica [TaxId: 1525]}
Length = 549
Score = 25.9 bits (57), Expect = 8.8
Identities = 10/50 (20%), Positives = 15/50 (30%), Gaps = 5/50 (10%)
Query: 160 LLKDYKGIIDQLSKDYKGIIDQLSKSPELKIANKIYFAKDIELNPAYQTQ 209
L+ L I D++ KIA +IY A +
Sbjct: 421 TLESRPSNFHVLYNLDLSIKDKI-----AKIATEIYGADGVNYTAEADKA 465
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.135 0.391
Gapped
Lambda K H
0.267 0.0480 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,238,693
Number of extensions: 57016
Number of successful extensions: 141
Number of sequences better than 10.0: 1
Number of HSP's gapped: 122
Number of HSP's successfully gapped: 26
Length of query: 342
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 256
Effective length of database: 1,226,816
Effective search space: 314064896
Effective search space used: 314064896
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.8 bits)