RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy2668
(65 letters)
>3f1s_A Protein Z-dependent protease inhibitor; PZ, ZPI, complex, serpin,
protease inhibitor, protease, GLYC secreted, serine
protease inhibitor, blood coagulation; HET: FLC NAG;
2.30A {Homo sapiens} PDB: 3h5c_A*
Length = 385
Score = 83.0 bits (206), Expect = 4e-21
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATV 46
+ FS AD S ++ L +S V+Q+ IEV+E GTEA A +
Sbjct: 298 IRRIFSPFADLSELSATGRNLQVSRVLQRTVIEVDERGTEAVAGIL 343
>3ozq_A Serpin48; SPE, hydrolase I; 1.90A {Tenebrio molitor}
Length = 376
Score = 82.6 bits (205), Expect = 5e-21
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT 45
++ AF AD S + K L+IS ++QK+FI+V+EEG EAAAAT
Sbjct: 288 VKKAFGDEADLSGIAGEKGDLVISNIVQKSFIDVSEEGVEAAAAT 332
>1m93_B Serine proteinase inhibitor 2; serpin, CRMA, apoptosis, ICE
inhibitor, viral protein; 1.65A {Cowpox virus} SCOP:
e.1.1.1
Length = 245
Score = 79.9 bits (198), Expect = 1e-20
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT 45
+ F S D+S M+ + + +I K +I+VNEE TEAAAAT
Sbjct: 200 LTEVFGSTGDYSNMSN--SDVSVDAMIHKTYIDVNEEYTEAAAAT 242
>1mtp_A Serine proteinase inhibitor (serpin), chain A; structural genomics,
protease inhibitor; 1.50A {Thermobifida fusca} SCOP:
e.1.1.1
Length = 323
Score = 80.3 bits (199), Expect = 2e-20
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATV 46
+ F+++AD S ++ PL + VI +A + V+E G E AAAT
Sbjct: 274 VRTLFTASADLSGIST--VPLYVDTVIHQARLRVDERGAEGAAATA 317
>4dy0_A GLIA-derived nexin; serpin, protease inhibitor, thrombin, cell
surface, hydrolas inhibitor; HET: IDS SGN; 2.35A {Homo
sapiens} PDB: 4dy7_C
Length = 379
Score = 80.4 bits (199), Expect = 3e-20
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 8/62 (12%)
Query: 1 MEVAFSSN-ADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATVDRPSIDEVILCCR 59
+ F S+ A+F+ +T E L +S ++QKA IEV+E+GT+A+AAT IL R
Sbjct: 294 ITDMFDSSKANFAKITTGSENLHVSHILQKAKIEVSEDGTKASAATT-------AILIAR 346
Query: 60 SS 61
SS
Sbjct: 347 SS 348
>1sek_A Serpin K; serine protease inhibitor, protease; 2.10A {Manduca
sexta} SCOP: e.1.1.1 PDB: 1k9o_I
Length = 378
Score = 80.3 bits (199), Expect = 4e-20
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 1 MEVAFSSN-ADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATV 46
++ F+ A + K KE L + IQKAFIEVNEEG EAAAA
Sbjct: 293 IKKLFTPGAARLENLLKTKESLYVDAAIQKAFIEVNEEGAEAAAANA 339
>1f0c_A ICE inhibitor; apoptosis, caspase inhibitor, protease inhibitor,
serpin, viral protein; 2.26A {Cowpox virus} SCOP:
e.1.1.1 PDB: 1c8o_A
Length = 305
Score = 78.8 bits (195), Expect = 8e-20
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATV 46
+ F S D+S M + + +I K +I+VNEE TEAAAAT
Sbjct: 255 LTEVFGSTGDYSNMCN--SDVSVDAMIHKTYIDVNEEYTEAAAATC 298
>2h4p_A MENT, heterochromatin-associated protein MENT; serine protease
inhibitor, serpin, hydrolase inhibitor; 1.70A {Gallus
gallus} PDB: 2h4q_A
Length = 394
Score = 79.3 bits (196), Expect = 8e-20
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATV 46
M AF++NADF MT K L IS+VI ++F+ V+E+GTEAAAAT
Sbjct: 346 MTTAFTTNADFRGMTDKK-DLAISKVIHQSFVAVDEKGTEAAAATA 390
>1uhg_A Ovalbumin, S-ovalbumin; allergen, egg white protein, serpin; HET:
SEP NAG; 1.90A {Gallus gallus} SCOP: e.1.1.1 PDB:
1ova_A* 1jti_A
Length = 385
Score = 79.3 bits (196), Expect = 9e-20
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATV 46
+ FSS+A+ S ++ + L IS+ + A E+NE G E +
Sbjct: 302 ITDVFSSSANLSGISSAE-SLKISQAVHAAHAEINEAGREVVGSAE 346
>1as4_A Antichymotrypsin, ACT; serpin, serine protease inhibitor; 2.10A
{Homo sapiens} SCOP: e.1.1.1 PDB: 2ach_A* 4caa_A 3caa_A
Length = 341
Score = 78.8 bits (195), Expect = 9e-20
Identities = 22/46 (47%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATV 46
+E AF+S AD S +T + L +S+V+ KA ++V EEGTEA+ AT
Sbjct: 291 IEEAFTSKADLSGITGAR-NLAVSQVVHKAVLDVFEEGTEASRATA 335
>3f02_A Neuroserpin; cleaved form, fenib, human, disease MUT glycoprotein,
protease inhibitor, secreted, serine protease inhibitor,
hydrolase inhibitor; 1.80A {Homo sapiens} PDB: 3fgq_A
1jjo_C 1jjo_A
Length = 359
Score = 78.8 bits (195), Expect = 1e-19
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATV 46
+ F +A+ + ++ NK + +S+ I K+F+EVNEEG+EAAA +
Sbjct: 309 ITEIFIKDANLTGLSDNK-EIFLSKAIHKSFLEVNEEGSEAAAVSG 353
>2xn6_A Thyroxine-binding globulin; transport, cleaved protein; HET: F6Y
T44; 1.29A {Homo sapiens} PDB: 2xn7_A* 2xn5_A* 2riv_A
2xn3_A* 2riw_A*
Length = 350
Score = 78.8 bits (195), Expect = 1e-19
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATV 46
++ A+S NADFS +T++ L +S KA + + E+GTEAA A
Sbjct: 294 IQHAYSENADFSGLTEDN-GLKLSNAAHKAVLHIGEKGTEAAGAMF 338
>1sng_A COG4826: serine protease inhibitor; serine protease inhibitor
(serpin), native state., hydrolase inhibitor; 1.76A
{Thermobifida fusca} SCOP: e.1.1.1
Length = 370
Score = 78.8 bits (195), Expect = 1e-19
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT 45
+ F+++AD S ++ PL + VI +A + V+E G E AAAT
Sbjct: 278 VRTLFTASADLSGIST--VPLYVDTVIHQARLRVDERGAEGAAAT 320
>3f5n_A Neuroserpin; cleaved form, fenib, human, tissue PLAS activator,
hydrolase inhibitor; 3.15A {Homo sapiens}
Length = 407
Score = 78.8 bits (195), Expect = 1e-19
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATVDRPSIDEVILCCRS 60
+ F +A+ + ++ NK + +S+ I K+F+EVNEEG+EAAA + +I R
Sbjct: 309 ITEIFIKDANLTGLSDNK-EIFLSKAIHKSFLEVNEEGSEAAAVSG-------MIAISRM 360
Query: 61 SVDTP 65
+V P
Sbjct: 361 AVLYP 365
>3pzf_A Serpin 2; protease inhibitor, melanization, hydrolase inhibito;
1.75A {Anopheles gambiae}
Length = 397
Score = 78.8 bits (195), Expect = 1e-19
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Query: 1 MEVAFSSNADFSLMTKN---KEPLLISEVIQKAFIEVNEEGTEAAAATVDRPSIDEVILC 57
+ FS NA L+ + ++ + +S + QKA I +NE G+EA AAT E+ L
Sbjct: 305 IREIFSQNASLPLLARGRGARDEVRVSRIFQKAGITINELGSEAYAAT-------EIQLV 357
Query: 58 CRSSVDTP 65
+ D
Sbjct: 358 NKFGGDGV 365
>1qmn_A AACT, alpha-1-antichymotrypsin; serpin, serine proteinase
inhibitor, partial loop insertion, loop-sheet
polymerization, emphysema, disease mutation; 2.27A {Homo
sapiens} SCOP: e.1.1.1 PDB: 3dlw_A
Length = 401
Score = 78.9 bits (195), Expect = 2e-19
Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT 45
+E AF+S AD S +T L +S+V+ KA ++V EEGTEA+AAT
Sbjct: 311 IEEAFTSKADLSGITG-ARNLAVSQVVHKAVLDVFEEGTEASAAT 354
>2ceo_A Thyroxine-binding globulin; transport, serpin, hormone trans
thyroxine, disease mutation, glycoprotein; HET: T44;
2.80A {Homo sapiens}
Length = 379
Score = 78.4 bits (194), Expect = 2e-19
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT 45
++ A+S NADFS +T++ L +S KA + + E+GTEAAA
Sbjct: 289 IQHAYSENADFSGLTEDN-GLKLSNAAHKAVLHIGEKGTEAAAVP 332
>3dy0_A N-terminus plasma serine protease inhibitor; serpin, blood
clotting, hydrolase inhibitor; HET: IDS SGN; 1.55A {Homo
sapiens} PDB: 1lq8_A* 2hi9_A*
Length = 336
Score = 78.0 bits (193), Expect = 2e-19
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT 45
+ F+S+AD S ++ + + +SE++ KA +EV+E GT AAAAT
Sbjct: 287 ISNVFTSHADLSGISNHS-NIQVSEMVHKAVVEVDESGTRAAAAT 330
>3b9f_I Protein C inhibitor; michaelis complex, acute phase, blood
coagulation, cleavage of basic residues, disease
mutation; HET: NAG FUC SGN IDS; 1.60A {Homo sapiens}
PDB: 2ol2_A*
Length = 395
Score = 78.4 bits (194), Expect = 2e-19
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT 45
+ F+S+AD S ++ + + +SE++ KA +EV+E GT AAAAT
Sbjct: 312 ISNVFTSHADLSGISNHS-NIQVSEMVHKAVVEVDESGTRAAAAT 355
>2vdx_A Corticosteroid-binding globulin; transport protein, cortisol
binding globulin, glycoprotein, lipid-binding, disease
mutation, CBG, SERP cleaved; 1.84A {Homo sapiens} PDB:
2vdy_A*
Length = 373
Score = 78.4 bits (194), Expect = 2e-19
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 15/63 (23%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT--------------V 46
+ F++ A+FS +T++ L S+V+ KA +++NEEGTEAA A
Sbjct: 289 IADLFTTQANFSRITQDA-QLKSSKVVHKAVLQLNEEGTEAAGAMFLEAIPRSKPIILRF 347
Query: 47 DRP 49
++P
Sbjct: 348 NQP 350
>3ndd_A Alpha-1-antitrypsin; serpin, hydrolase inhibitor; 1.50A {Homo
sapiens} PDB: 3ndf_A 7api_A* 8api_A* 9api_A* 1d5s_A
1ezx_A 3t1p_A 2d26_A 1qmb_A
Length = 343
Score = 78.0 bits (193), Expect = 2e-19
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT 45
+ FS+ AD S +T+ PL +S+ + KA + ++E+GTEAA
Sbjct: 293 ITKVFSNGADLSGVTEEA-PLKLSKAVHKAVLTIDEKGTEAAPDD 336
>2zv6_A Serpin B3; serine proteinase inhibitor, reactive site loop,
acetylation, alternative splicing, cytoplasm,
polymorphism, protease inhibitor; 2.70A {Homo sapiens}
Length = 401
Score = 78.1 bits (193), Expect = 2e-19
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT 45
M F+ +AD S MT ++ L++S V+ KAF+EV EEG EAAAAT
Sbjct: 315 MVDIFNGDADLSGMTGSR-GLVLSGVLHKAFVEVTEEGAEAAAAT 358
>3nda_A Serpin-2; vaccination target, TICK, hydrolase inhibitor; HET: 1PE;
1.80A {Ixodes ricinus}
Length = 377
Score = 78.0 bits (193), Expect = 2e-19
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATV 46
++ F S AD S + L +S V KA +EVNEEGT AAA T
Sbjct: 292 IKQIFESGADLSGIND--GSLRVSAVEHKAVVEVNEEGTVAAATTG 335
>1yxa_A Serine (OR cysteine) proteinase inhibitor, clade 3N; serpin,
antichymotrypsin, protease inhibitor, reactive centr
plasma, hydrolase inhibitor; 2.10A {Mus musculus}
Length = 398
Score = 78.1 bits (193), Expect = 3e-19
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT 45
+ FS+ AD S +T K L +S+V+ KA ++V E GTEAAAAT
Sbjct: 311 IREVFSTQADLSAITGTK-DLRVSQVVHKAVLDVAETGTEAAAAT 354
>2h4r_A MENT, heterochromatin-associated protein MENT; serine protease
inhibitor, serpin, hydrolase inhibitor; 2.70A {Gallus
gallus} PDB: 2dut_A
Length = 415
Score = 77.8 bits (192), Expect = 4e-19
Identities = 26/45 (57%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT 45
M AF++NADF MT K L IS+VI ++F+ V+E+GTEAAAAT
Sbjct: 326 MTTAFTTNADFRGMTDKK-DLAISKVIHQSFVAVDEKGTEAAAAT 369
>3le2_A Serpin-ZX; apoplast, glycoprotein, protease inhibitor, secreted,
serine protease inhibitor, hydrolase; 2.20A {Arabidopsis
thaliana}
Length = 393
Score = 77.4 bits (191), Expect = 4e-19
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 1 MEVAFSSNADFSLMTKN---KEPLLISEVIQKAFIEVNEEGTEAAAATV 46
+ FS + M ++ + L +S + KA IEVNEEGTEAAAA+
Sbjct: 299 LTSPFSGEEGLTEMVESPEMGKNLCVSNIFHKACIEVNEEGTEAAAASA 347
>3ne4_A Alpha-1-antitrypsin; serpin, LUNG disease, liver disease,
polymerisation, hydrolase inhibitor; 1.81A {Homo
sapiens} PDB: 1qlp_A 2qug_A 3cwl_A 3cwm_A* 1psi_A 3drm_A
1kct_A 3dru_A 1hp7_A 1iz2_A* 1oph_A 1oo8_A 1atu_A 1d5s_B
1qmb_B
Length = 424
Score = 77.7 bits (192), Expect = 4e-19
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 15/63 (23%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT--------------V 46
+ FS+ AD S +T+ PL +S+ + KA + ++E+GTEAA A
Sbjct: 338 ITKVFSNGADLSGVTEEA-PLKLSKAVHKAVLTIDEKGTEAAGAMFLEAIPMSIPPEVKF 396
Query: 47 DRP 49
++P
Sbjct: 397 NKP 399
>2wxw_A Angiotensinogen, serpin A8; glycoprotein, hypertension,
vasoconstrictor, renin, serpins, vasoactive, hormone;
3.30A {Homo sapiens} PDB: 2x0b_B
Length = 453
Score = 77.1 bits (190), Expect = 6e-19
Identities = 8/61 (13%), Positives = 22/61 (36%), Gaps = 14/61 (22%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT------------VDR 48
+ + + ++ + + + EV+ F E+ + E +T ++R
Sbjct: 369 LPAILHTELNLQKLSN--DRIRVGEVLNSIFFELEADEREPTESTQQLNKPEVLEVTLNR 426
Query: 49 P 49
P
Sbjct: 427 P 427
>1jmo_A HC-II, heparin cofactor II, HLS2, serin; serpin, thrombin,
protease, inhibition, inhibitor, blood CLO; HET: TYS NDG
NAG; 2.20A {Homo sapiens} SCOP: e.1.1.1 PDB: 1jmj_A*
Length = 480
Score = 76.6 bits (189), Expect = 1e-18
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 16/63 (25%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT--------------V 46
+ + F N + + ++ + + I + I VNEEGT+A T V
Sbjct: 395 IRMLFDKNGNMAGISD--QRIAIDLFKHQGTITVNEEGTQATTVTTVGFMPLSTQVRFTV 452
Query: 47 DRP 49
DRP
Sbjct: 453 DRP 455
>1hle_A Horse leukocyte elastase inhibitor; hydrolase inhibitor(serine
proteinase); 1.95A {Equus caballus} SCOP: e.1.1.1
Length = 345
Score = 75.4 bits (186), Expect = 2e-18
Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 1 MEVAFS-SNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT 45
++ F+ AD S M+ L +S++I K+F+++NEEGTEAAAAT
Sbjct: 294 VQDLFNRGKADLSGMS-GARDLFVSKIIHKSFVDLNEEGTEAAAAT 338
>4au2_A HSP47, serpin peptidase inhibitor, clade H (heat shock P 47),
member 1, (collagen binding...; chaperone-peptide
complex; 2.30A {Canis lupus familiaris} PDB: 4au3_A
4au4_A 4awr_A 4au3_B
Length = 392
Score = 74.9 bits (185), Expect = 3e-18
Identities = 14/63 (22%), Positives = 20/63 (31%), Gaps = 15/63 (23%)
Query: 1 MEVAFSSN-ADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT-------------V 46
+ A N AD S M+ K+ L ++ V E + EG
Sbjct: 292 LTEAIDKNKADLSRMSG-KKDLYLASVFHATAFEWDTEGNPFDQDIYGREELRSPKLFYA 350
Query: 47 DRP 49
D P
Sbjct: 351 DHP 353
>2oay_A C1-inhibitor, plasma protease C1 inhibitor, C1 INH, C1INH; latent
serpin, RCL insertion, immune system,hydrolase inhibi;
HET: NAG; 2.35A {Homo sapiens}
Length = 390
Score = 75.0 bits (185), Expect = 3e-18
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Query: 3 VAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT------------VDRP 49
FS + + +T++ L +S + + +E+ E G EAAAA+ V +P
Sbjct: 309 FDFSYDLNLCGLTEDP-DLQVSAMQHQTVLELTETGVEAAAASAISVARTLLVFEVQQP 366
>1wz9_A Maspin precursor; serpin, tumor suppressor, serpinb5, signaling
protein; HET: CME; 2.10A {Homo sapiens} PDB: 1xu8_A
1xqg_A 1xqj_A
Length = 375
Score = 74.6 bits (184), Expect = 4e-18
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 14/62 (22%)
Query: 1 MEVAFSSN-ADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT------------VD 47
++ FS + +DFS M++ K + +S VI K +E+ E+G ++ D
Sbjct: 293 LKHIFSEDTSDFSGMSETK-GVALSNVIHKVCLEITEDGGDSIEVPGARILQHKDELNAD 351
Query: 48 RP 49
P
Sbjct: 352 HP 353
>3kcg_I Antithrombin-III, ATIII; michaelis complex, blood coagulation,
calcium, disulfide bond, EGF-like domain, glycoprotein,
hemophilia, hydrolase; HET: NAG FUC MAN NTP; 1.70A {Homo
sapiens} PDB: 1e04_I* 1ath_A 1ant_L* 1br8_L 1azx_I*
1dzh_L* 1e03_L* 1dzg_L* 1e05_L* 1jvq_L* 1lk6_L* 1nq9_I*
1oyh_L* 1r1l_L* 1sr5_A* 2ant_L* 2beh_L* 2hij_L* 2znh_A*
3evj_I* ...
Length = 432
Score = 74.6 bits (184), Expect = 4e-18
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 1 MEVAFS-SNADFSLMTKN-KEPLLISEVIQKAFIEVNEEGTEAAAATV 46
+ FS + + ++ L +S+ KAF+EVNEEG+EAAA+T
Sbjct: 340 LVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEEGSEAAASTA 387
>1lj5_A Plasminogen activator inhibitor-1; beta-barrell, blood clotting;
1.80A {Homo sapiens} SCOP: e.1.1.1 PDB: 1dvn_A 1c5g_A
1a7c_A* 3q02_A 3q03_A 3r4l_A* 1oc0_A 1b3k_A 3pb1_I
1dvm_A 3eox_A 3cvm_A 1db2_A 9pai_A 3lw2_A 9pai_B
Length = 379
Score = 74.6 bits (184), Expect = 4e-18
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 9/62 (14%)
Query: 1 MEVAFS-SNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATVDRPSIDEVILCCR 59
M F ADF+ ++ ++EPL +++ +QK IEVNE GT A+++T VI+ R
Sbjct: 295 MTDMFRQFQADFTSLS-DQEPLHVAQALQKVKIEVNESGTVASSSTA-------VIVSAR 346
Query: 60 SS 61
+
Sbjct: 347 MA 348
>2v95_A Corticosteroid-binding globulin; transport protein, CBG, RCL,
serpin, secreted, transport, glycoprotein,
lipid-binding, glucocorticoids; HET: HCY; 1.93A {Rattus
norvegicus}
Length = 371
Score = 74.5 bits (184), Expect = 5e-18
Identities = 10/63 (15%), Positives = 25/63 (39%), Gaps = 16/63 (25%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT--------------V 46
++ ++ +DFS TK + L ++ KA ++++E +
Sbjct: 288 IKDLLTNQSDFSGNTK--DVPLTLTMVHKAMLQLDEGNVLPNSTNGAPLHLRSEPLDIKF 345
Query: 47 DRP 49
++P
Sbjct: 346 NKP 348
>2pef_A Serine protease inhibitor; serpin; 1.60A {Thermoanaerobacter
tengcongensis} PDB: 2vh4_A 2pee_A
Length = 373
Score = 74.2 bits (183), Expect = 6e-18
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 1 MEVAFSSN-ADFSLMTKN-KEPLLISEVIQKAFIEVNEEGTEAAAATV 46
M AF + ADFS + K+ L ISEV+ K FI V+E GT+A A T
Sbjct: 283 MTDAFLPDKADFSKLGKSDIGNLYISEVLHKTFISVDELGTKAGAVTS 330
>2arr_A Plasminogen activator inhibitor-2; serpin, peptide binding,
hydrolase inhibitor-PEPT complex; 1.55A {Homo sapiens}
PDB: 2arq_A 1jrr_A 1by7_A
Length = 382
Score = 74.2 bits (183), Expect = 6e-18
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 1 MEVAFSSN-ADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATVDRPSIDEVILCCR 59
ME AF+ A+FS M++ L +SEV +A ++VNEEGTEAAA T ++ R
Sbjct: 296 MEDAFNKGRANFSGMSERN-DLFLSEVFHQAMVDVNEEGTEAAAGTG-------GVMTGR 347
Query: 60 SSVDTP 65
+ P
Sbjct: 348 TGHGGP 353
>3sto_A Serine protease inhibitor; serpin fold, hydrolase inhibitor; 2.41A
{Schistosoma haematobium}
Length = 406
Score = 73.9 bits (182), Expect = 8e-18
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 1 MEVAFS-SNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATV 46
+ F +D S +T N L ++E IQ +++NE G EA T
Sbjct: 315 VVDLFDPVKSDLSGITPNP-NLYVNEFIQTNVLKLNESGIEATTVTS 360
>2r9y_A Alpha-2-antiplasmin; inhibitory serpin, plasmin inhibitor, AC
phase, glycoprotein, protease inhibitor, secreted,
serine P inhibitor, sulfation; 2.65A {Mus musculus}
Length = 430
Score = 73.5 bits (181), Expect = 1e-17
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 16/62 (25%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT-------------VD 47
++ F D +++ + L++S V ++ +E++E G EAAAAT V+
Sbjct: 295 LQELFQ-GPDLRGISE--QNLVVSSVQHQSTMELSEAGVEAAAATSVAMNRMSLSSFTVN 351
Query: 48 RP 49
RP
Sbjct: 352 RP 353
>1imv_A PEDF, pigment epithelium-derived factor; serpin, angiogenesis,
signaling protein; HET: NAG; 2.85A {Homo sapiens} SCOP:
e.1.1.1
Length = 398
Score = 71.5 bits (176), Expect = 6e-17
Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT--------------V 46
++ F S DFS +T +P+ +++V +A E NE+G + +
Sbjct: 314 LQSLFDS-PDFSKITG--KPIKLTQVEHRAGFEWNEDGAGTTPSPGLQPAHLTFPLDYHL 370
Query: 47 DRP 49
++P
Sbjct: 371 NQP 373
>2wxy_C Angiotensinogen, serpin A8; glycoprotein, hypertension,
vasoconstrictor, renin, serpins, vasoactive, hormone;
2.10A {Mus musculus} PDB: 2wxx_A 2wy0_C 2wxz_A 2wxz_C
2wy1_A
Length = 453
Score = 66.6 bits (163), Expect = 3e-15
Identities = 8/63 (12%), Positives = 19/63 (30%), Gaps = 17/63 (26%)
Query: 1 MEVAFSSNADFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAAT--------------V 46
+ + A+ + + + EV+ +E+ + G E T +
Sbjct: 368 LPTLLGAEANLNNIGD--TNPRVGEVLNSILLEL-KAGEEEQPTTSVQQPGSPEALDVTL 424
Query: 47 DRP 49
P
Sbjct: 425 SSP 427
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project
on protein structural and functional analyses; 2.00A
{Thermus thermophilus}
Length = 434
Score = 26.0 bits (58), Expect = 0.81
Identities = 4/21 (19%), Positives = 8/21 (38%)
Query: 28 QKAFIEVNEEGTEAAAATVDR 48
+ A ++EE A +
Sbjct: 34 RNALAYLDEEAARKEALALTE 54
>1spv_A Putative polyprotein/phosphatase; structural genomoics, alpha/beta
monomeric protein, structural genomics, PSI, protein
structure initiative; HET: MES; 2.00A {Escherichia coli}
SCOP: c.50.1.2
Length = 184
Score = 25.2 bits (56), Expect = 1.5
Identities = 6/29 (20%), Positives = 8/29 (27%), Gaps = 5/29 (17%)
Query: 35 NEEGTEAAAATV-----DRPSIDEVILCC 58
E A TV ++V C
Sbjct: 130 RAAAAEIAVKTVSEFITRHALPEQVYFVC 158
>2dx6_A Hypothetical protein TTHA0132; conserved hypothetical protein,
structural genomics, NPPSFA; 1.78A {Thermus
thermophilus} PDB: 3v45_A
Length = 159
Score = 24.8 bits (55), Expect = 1.7
Identities = 6/30 (20%), Positives = 8/30 (26%), Gaps = 1/30 (3%)
Query: 35 NEEGTEAAAATVDR-PSIDEVILCCRSSVD 63
E + + P EV L D
Sbjct: 122 VEAVARVMLEEIKKAPDTLEVTLYGYREED 151
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein
complex, ligase, ATP-binding, nucleotide-bindi protein
biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB:
2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A
Length = 485
Score = 25.2 bits (56), Expect = 1.8
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 29 KAFIEVNEEGTEAAAATVDR 48
K+F+ +++E A +D
Sbjct: 41 KSFLALDKENAIKKAQELDE 60
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double
layers of alpha helices on TOP and bottom, hydrolase;
HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP:
c.117.1.1 PDB: 1m21_A*
Length = 503
Score = 24.8 bits (55), Expect = 1.8
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 29 KAFIEVNEEGTEAAAA 44
+A IE+N + + AA
Sbjct: 49 RAVIELNPDALKEAAE 64
>2x47_A Macro domain-containing protein 1; signaling protein, signal
transduction, estrogen signaling; 1.70A {Homo sapiens}
Length = 235
Score = 24.6 bits (54), Expect = 2.1
Identities = 8/35 (22%), Positives = 12/35 (34%), Gaps = 6/35 (17%)
Query: 35 NEEGTEAAAATVDR------PSIDEVILCCRSSVD 63
E E AT+ +D +I+C D
Sbjct: 186 CEAAAEIVLATLREWLEQHKDKVDRLIICVFLEKD 220
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein
complex, ligase, protein biosynthesis; HET: ADP; 2.30A
{Aquifex aeolicus} PDB: 3h0m_A 3h0r_A*
Length = 478
Score = 24.8 bits (55), Expect = 2.4
Identities = 4/20 (20%), Positives = 7/20 (35%)
Query: 29 KAFIEVNEEGTEAAAATVDR 48
KA+I A ++
Sbjct: 40 KAYITPLYGKALKQAESLKE 59
>3v7i_A Putative polyketide synthase; type III polyketide synthase,
acyltransferase, transferase,; 2.90A {Streptomyces
coelicolor}
Length = 413
Score = 24.5 bits (53), Expect = 2.8
Identities = 6/46 (13%), Positives = 12/46 (26%), Gaps = 10/46 (21%)
Query: 20 PLLISEVIQKAFIEVNEEGTEAAAATVDRPSIDEVILCCRSSVDTP 65
+ A A +D +D +I ++ P
Sbjct: 138 QAYGERAARGAL----------QIAGLDVADVDCLITSNSTTPALP 173
>1gy6_A Nuclear transport factor 2; 1.6A {Rattus norvegicus} SCOP:
d.17.4.2 PDB: 1a2k_A 1oun_A 1ar0_A 1u5o_A 1ask_A 1gy5_A
1jb5_A 1jb4_A 1jb2_A 1qma_A
Length = 127
Score = 24.4 bits (53), Expect = 2.9
Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 10 DFSLMTKNKEPLLISEVIQKAFIEVNEEGTEAAAATVD-RPSIDEVIL 56
D S +T + I + + + + + D +P+ D I+
Sbjct: 35 DASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCII 82
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase;
2.00A {Oryza sativa} PDB: 3ale_A
Length = 387
Score = 23.6 bits (51), Expect = 6.3
Identities = 9/46 (19%), Positives = 14/46 (30%), Gaps = 10/46 (21%)
Query: 20 PLLISEVIQKAFIEVNEEGTEAAAATVDRPSIDEVILCCRSSVDTP 65
P L +E +KA A I +++ S P
Sbjct: 97 PELAAEAAKKAI----------AEWGRPAADITHLVVTTNSGAHVP 132
>2xd7_A Core histone macro-H2A.2; chromosomal protein, nucleosome core,
chromatin regulator, nucleus, DNA-binding protein,
phosphoprotein; 2.09A {Homo sapiens}
Length = 193
Score = 23.0 bits (50), Expect = 8.1
Identities = 3/36 (8%), Positives = 7/36 (19%), Gaps = 7/36 (19%)
Query: 35 NEEGTEAAAATV-------DRPSIDEVILCCRSSVD 63
+ + + S+ V S
Sbjct: 147 KQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSES 182
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.313 0.127 0.340
Gapped
Lambda K H
0.267 0.0755 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 895,463
Number of extensions: 40502
Number of successful extensions: 142
Number of sequences better than 10.0: 1
Number of HSP's gapped: 110
Number of HSP's successfully gapped: 53
Length of query: 65
Length of database: 6,701,793
Length adjustment: 36
Effective length of query: 29
Effective length of database: 5,696,637
Effective search space: 165202473
Effective search space used: 165202473
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 51 (23.4 bits)