Query psy2671
Match_columns 573
No_of_seqs 474 out of 2910
Neff 10.8
Searched_HMMs 29240
Date Fri Aug 16 22:13:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2671.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2671hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 6.9E-60 2.4E-64 501.1 59.2 450 102-572 51-608 (611)
2 2ymu_A WD-40 repeat protein; u 100.0 4.2E-54 1.4E-58 455.0 57.8 360 199-572 213-577 (577)
3 1nr0_A Actin interacting prote 100.0 2.3E-54 7.9E-59 458.7 51.5 401 108-572 16-564 (611)
4 2ymu_A WD-40 repeat protein; u 100.0 1E-53 3.4E-58 452.1 52.3 398 105-572 11-454 (577)
5 2oaj_A Protein SNI1; WD40 repe 100.0 3E-51 1E-55 450.1 49.5 402 107-572 14-658 (902)
6 1pgu_A Actin interacting prote 100.0 4.5E-50 1.6E-54 427.3 55.9 445 102-572 55-611 (615)
7 3sfz_A APAF-1, apoptotic pepti 100.0 6.5E-50 2.2E-54 460.0 45.7 406 105-572 610-1155(1249)
8 1vyh_C Platelet-activating fac 100.0 3.7E-49 1.3E-53 397.9 39.3 308 103-572 101-408 (410)
9 3ow8_A WD repeat-containing pr 100.0 3.8E-48 1.3E-52 376.8 39.8 290 104-573 26-319 (321)
10 2ynn_A Coatomer subunit beta'; 100.0 3.3E-48 1.1E-52 374.8 38.3 286 104-571 7-298 (304)
11 1pgu_A Actin interacting prote 100.0 3.7E-47 1.3E-51 404.9 48.6 397 108-572 16-569 (615)
12 3sfz_A APAF-1, apoptotic pepti 100.0 5.9E-48 2E-52 443.8 44.3 408 101-572 648-1204(1249)
13 1got_B GT-beta; complex (GTP-b 100.0 8.3E-47 2.8E-51 371.1 43.6 290 201-572 49-340 (340)
14 1got_B GT-beta; complex (GTP-b 100.0 1.3E-46 4.6E-51 369.6 41.7 289 102-530 47-340 (340)
15 3iz6_a 40S ribosomal protein R 100.0 2.6E-47 9E-52 380.6 32.6 293 199-572 58-372 (380)
16 2pbi_B Guanine nucleotide-bind 100.0 4.3E-46 1.5E-50 367.8 40.6 291 103-530 57-354 (354)
17 2pbi_B Guanine nucleotide-bind 100.0 5.8E-46 2E-50 366.9 41.1 287 201-572 58-354 (354)
18 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.7E-46 1.6E-50 366.4 39.7 295 103-572 8-332 (345)
19 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-45 3.8E-50 406.1 45.0 399 108-572 56-729 (902)
20 3frx_A Guanine nucleotide-bind 100.0 3.5E-45 1.2E-49 356.0 41.0 298 103-534 10-318 (319)
21 3iz6_a 40S ribosomal protein R 100.0 1.4E-46 4.7E-51 375.4 30.1 302 102-535 58-377 (380)
22 4g56_B MGC81050 protein; prote 100.0 1E-45 3.4E-50 365.4 35.0 283 205-572 40-340 (357)
23 2pm9_A Protein WEB1, protein t 100.0 2.7E-46 9.2E-51 378.4 30.1 328 109-572 11-411 (416)
24 2xzm_R RACK1; ribosome, transl 100.0 2.2E-44 7.7E-49 354.3 41.3 302 103-534 14-341 (343)
25 4gqb_B Methylosome protein 50; 100.0 6.3E-45 2.2E-49 356.8 35.5 282 205-572 28-328 (344)
26 4gqb_B Methylosome protein 50; 100.0 2.3E-44 7.8E-49 352.8 39.0 300 107-536 27-334 (344)
27 1r5m_A SIR4-interacting protei 100.0 1.6E-44 5.3E-49 366.2 39.0 322 205-572 43-422 (425)
28 4g56_B MGC81050 protein; prote 100.0 8E-45 2.7E-49 359.0 35.8 291 107-535 39-345 (357)
29 3mkq_A Coatomer beta'-subunit; 100.0 1.2E-44 4E-49 398.6 40.7 365 104-572 7-420 (814)
30 1r5m_A SIR4-interacting protei 100.0 3.9E-44 1.3E-48 363.3 40.3 338 109-532 44-424 (425)
31 3frx_A Guanine nucleotide-bind 100.0 1.1E-43 3.7E-48 345.5 40.7 290 201-572 11-314 (319)
32 2hes_X YDR267CP; beta-propelle 100.0 6.9E-44 2.4E-48 348.6 38.3 300 103-533 7-328 (330)
33 4ery_A WD repeat-containing pr 100.0 2.8E-43 9.5E-48 341.9 41.8 287 201-572 17-309 (312)
34 4ery_A WD repeat-containing pr 100.0 7.7E-43 2.6E-47 338.8 43.4 293 102-532 15-311 (312)
35 4aow_A Guanine nucleotide-bind 100.0 1.3E-42 4.3E-47 341.4 43.6 298 103-535 31-339 (340)
36 1erj_A Transcriptional repress 100.0 3.7E-43 1.3E-47 352.2 39.6 314 108-533 62-389 (393)
37 2xzm_R RACK1; ribosome, transl 100.0 7.3E-43 2.5E-47 343.5 40.8 294 201-572 15-337 (343)
38 3mkq_A Coatomer beta'-subunit; 100.0 9.1E-44 3.1E-48 391.5 37.6 393 103-571 48-501 (814)
39 2hes_X YDR267CP; beta-propelle 100.0 4.2E-43 1.4E-47 343.0 37.5 286 201-572 8-325 (330)
40 3vl1_A 26S proteasome regulato 100.0 1E-43 3.5E-48 360.1 34.1 343 110-572 56-416 (420)
41 1erj_A Transcriptional repress 100.0 1E-42 3.6E-47 348.9 38.9 287 205-572 62-386 (393)
42 1gxr_A ESG1, transducin-like e 100.0 3.1E-42 1E-46 338.0 39.4 320 206-572 8-334 (337)
43 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.8E-41 6.2E-46 346.2 44.9 320 103-533 111-442 (445)
44 1gxr_A ESG1, transducin-like e 100.0 1.4E-41 4.9E-46 333.2 41.1 321 109-531 8-335 (337)
45 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.7E-41 2.3E-45 342.0 42.7 315 202-572 113-439 (445)
46 3v7d_B Cell division control p 100.0 1E-40 3.5E-45 342.6 43.1 318 104-529 115-459 (464)
47 3zwl_B Eukaryotic translation 100.0 6.8E-41 2.3E-45 332.7 39.1 296 105-572 27-343 (369)
48 4aow_A Guanine nucleotide-bind 100.0 2.1E-40 7.1E-45 325.6 41.6 287 201-572 32-334 (340)
49 3dm0_A Maltose-binding peripla 100.0 6.4E-41 2.2E-45 361.3 41.5 294 104-532 376-692 (694)
50 2j04_B YDR362CP, TAU91; beta p 100.0 3.9E-43 1.3E-47 361.2 22.0 282 204-533 204-517 (524)
51 3gre_A Serine/threonine-protei 100.0 4.4E-41 1.5E-45 342.6 32.1 348 101-572 53-437 (437)
52 2ynn_A Coatomer subunit beta'; 100.0 1.3E-40 4.4E-45 321.6 32.9 245 201-572 7-256 (304)
53 2j04_B YDR362CP, TAU91; beta p 100.0 3E-42 1E-46 354.7 22.1 309 216-572 170-514 (524)
54 2j04_A TAU60, YPL007P, hypothe 100.0 3.3E-42 1.1E-46 344.6 21.0 315 109-564 14-350 (588)
55 3v7d_B Cell division control p 100.0 2.2E-39 7.6E-44 332.7 42.7 319 202-571 116-459 (464)
56 3dm0_A Maltose-binding peripla 100.0 1.1E-39 3.8E-44 351.7 40.5 284 201-572 376-690 (694)
57 3ei3_B DNA damage-binding prot 100.0 9.7E-40 3.3E-44 326.6 36.2 302 104-533 67-382 (383)
58 3ow8_A WD repeat-containing pr 100.0 6.9E-40 2.4E-44 318.6 33.4 247 104-532 74-320 (321)
59 1vyh_C Platelet-activating fac 100.0 8.6E-40 2.9E-44 329.5 35.1 245 201-572 102-366 (410)
60 1sq9_A Antiviral protein SKI8; 100.0 5.1E-40 1.7E-44 330.2 33.3 309 103-535 9-397 (397)
61 2pm7_B Protein transport prote 100.0 1.1E-39 3.7E-44 314.0 34.0 261 105-572 4-282 (297)
62 3odt_A Protein DOA1; ubiquitin 100.0 4.9E-39 1.7E-43 311.8 38.5 289 102-539 10-302 (313)
63 3odt_A Protein DOA1; ubiquitin 100.0 5.3E-39 1.8E-43 311.5 37.1 279 201-572 12-293 (313)
64 3i2n_A WD repeat-containing pr 100.0 1.1E-39 3.9E-44 322.5 32.3 299 106-535 14-355 (357)
65 1sq9_A Antiviral protein SKI8; 100.0 1.4E-39 4.6E-44 327.1 33.2 289 201-572 10-392 (397)
66 4e54_B DNA damage-binding prot 100.0 4.2E-40 1.4E-44 334.8 29.0 309 105-536 114-433 (435)
67 3k26_A Polycomb protein EED; W 100.0 1.1E-39 3.8E-44 323.7 31.3 304 106-532 14-365 (366)
68 4gga_A P55CDC, cell division c 100.0 2.5E-38 8.4E-43 320.3 41.0 298 113-553 108-415 (420)
69 1k8k_C P40, ARP2/3 complex 41 100.0 4.1E-39 1.4E-43 320.5 34.7 299 205-572 6-358 (372)
70 1k8k_C P40, ARP2/3 complex 41 100.0 2.8E-39 9.6E-44 321.7 32.9 291 108-536 6-364 (372)
71 3ei3_B DNA damage-binding prot 100.0 4.6E-39 1.6E-43 321.7 33.6 285 202-572 68-379 (383)
72 4a11_B DNA excision repair pro 100.0 5.8E-39 2E-43 323.4 34.2 328 202-573 38-403 (408)
73 3i2n_A WD repeat-containing pr 100.0 4E-39 1.4E-43 318.6 31.2 294 203-572 14-350 (357)
74 4h5i_A Guanine nucleotide-exch 100.0 6.6E-39 2.3E-43 317.4 30.2 288 208-572 15-340 (365)
75 4h5i_A Guanine nucleotide-exch 100.0 4.4E-39 1.5E-43 318.7 28.9 290 111-534 15-344 (365)
76 3dwl_C Actin-related protein 2 100.0 1.5E-39 5.2E-44 324.4 25.1 319 109-531 10-377 (377)
77 4aez_A CDC20, WD repeat-contai 100.0 6E-38 2E-42 315.5 35.8 294 105-540 86-387 (401)
78 3bg1_A Protein SEC13 homolog; 100.0 7.1E-39 2.4E-43 311.1 27.9 259 105-490 8-292 (316)
79 3dwl_C Actin-related protein 2 100.0 1.1E-39 3.6E-44 325.6 22.0 299 206-573 10-377 (377)
80 3k26_A Polycomb protein EED; W 100.0 2.7E-38 9.4E-43 313.6 31.4 311 203-572 14-363 (366)
81 3vl1_A 26S proteasome regulato 100.0 1.1E-38 3.9E-43 322.9 28.9 298 208-572 57-362 (420)
82 4e54_B DNA damage-binding prot 100.0 1.4E-38 4.9E-43 323.5 29.3 285 204-572 116-427 (435)
83 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.5E-38 2.9E-42 307.4 33.2 250 200-572 8-280 (345)
84 4ggc_A P55CDC, cell division c 100.0 7.5E-37 2.6E-41 297.2 39.3 283 113-534 28-316 (318)
85 4gga_A P55CDC, cell division c 100.0 6.4E-37 2.2E-41 309.9 39.7 276 210-572 108-392 (420)
86 3bg1_A Protein SEC13 homolog; 100.0 2.3E-38 7.7E-43 307.5 25.9 248 202-572 8-290 (316)
87 2pm9_A Protein WEB1, protein t 100.0 1.2E-38 4.2E-43 322.2 24.2 289 206-572 11-334 (416)
88 1yfq_A Cell cycle arrest prote 100.0 1.3E-37 4.4E-42 306.0 30.0 275 203-567 7-315 (342)
89 4ggc_A P55CDC, cell division c 100.0 7.1E-36 2.4E-40 290.2 39.8 276 210-572 28-312 (318)
90 3dw8_B Serine/threonine-protei 100.0 4.4E-37 1.5E-41 313.9 32.0 306 108-531 26-444 (447)
91 1p22_A F-BOX/WD-repeat protein 100.0 1E-36 3.5E-41 310.0 34.2 292 204-553 130-433 (435)
92 4a11_B DNA excision repair pro 100.0 5.8E-37 2E-41 308.8 31.6 304 227-572 21-362 (408)
93 1p22_A F-BOX/WD-repeat protein 100.0 1.2E-36 4.2E-41 309.4 33.5 280 107-496 130-419 (435)
94 1yfq_A Cell cycle arrest prote 100.0 3.8E-36 1.3E-40 295.5 35.3 286 106-530 7-321 (342)
95 3dw8_B Serine/threonine-protei 100.0 4.3E-37 1.5E-41 314.0 29.5 292 205-572 26-443 (447)
96 3f3f_A Nucleoporin SEH1; struc 100.0 2.6E-36 8.9E-41 296.8 33.2 300 105-537 6-341 (351)
97 4aez_A CDC20, WD repeat-contai 100.0 1.5E-35 5.3E-40 297.9 35.4 283 243-572 85-377 (401)
98 3mmy_A MRNA export factor; mRN 100.0 1.1E-35 3.8E-40 294.9 33.9 292 234-571 24-342 (368)
99 3mmy_A MRNA export factor; mRN 100.0 2.1E-35 7.2E-40 292.9 34.5 292 201-532 33-345 (368)
100 3f3f_A Nucleoporin SEH1; struc 100.0 7.6E-36 2.6E-40 293.5 29.9 306 202-572 6-334 (351)
101 3jrp_A Fusion protein of prote 100.0 6.2E-36 2.1E-40 298.1 28.9 263 103-493 4-289 (379)
102 2j04_A TAU60, YPL007P, hypothe 100.0 5.6E-37 1.9E-41 306.9 20.3 282 207-572 15-318 (588)
103 3gre_A Serine/threonine-protei 100.0 4.8E-36 1.6E-40 305.4 24.7 302 204-562 60-391 (437)
104 3jrp_A Fusion protein of prote 100.0 8.6E-35 2.9E-39 289.8 31.1 264 201-532 5-286 (379)
105 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-34 3.8E-39 291.8 29.5 287 113-536 37-345 (402)
106 3vu4_A KMHSV2; beta-propeller 100.0 4E-34 1.4E-38 282.2 32.2 286 233-572 3-333 (355)
107 3jro_A Fusion protein of prote 100.0 1.9E-34 6.3E-39 312.7 26.1 262 104-493 3-287 (753)
108 4gq1_A NUP37; propeller, trans 100.0 2.4E-34 8.2E-39 288.0 21.6 265 248-567 88-382 (393)
109 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-33 3.8E-38 284.5 26.3 277 211-572 38-339 (402)
110 2vdu_B TRNA (guanine-N(7)-)-me 100.0 9E-33 3.1E-37 282.1 32.2 277 208-572 5-388 (450)
111 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.9E-32 1E-36 278.3 35.7 360 110-532 4-390 (450)
112 3lrv_A PRE-mRNA-splicing facto 100.0 3.3E-33 1.1E-37 274.7 26.1 273 213-571 42-329 (343)
113 3zwl_B Eukaryotic translation 100.0 2.6E-32 9E-37 270.7 32.2 253 202-572 27-301 (369)
114 2w18_A PALB2, fancn, partner a 100.0 4.1E-32 1.4E-36 255.4 31.5 282 210-572 42-354 (356)
115 4gq1_A NUP37; propeller, trans 100.0 1.5E-33 5.1E-38 282.2 23.2 289 105-532 84-388 (393)
116 3jro_A Fusion protein of prote 100.0 7.4E-33 2.5E-37 300.1 29.5 247 202-572 4-282 (753)
117 3bws_A Protein LP49; two-domai 100.0 1.3E-30 4.4E-35 264.8 42.9 300 225-572 95-429 (433)
118 3vu4_A KMHSV2; beta-propeller 100.0 6.7E-32 2.3E-36 266.3 31.8 279 202-535 14-338 (355)
119 2w18_A PALB2, fancn, partner a 100.0 7.6E-32 2.6E-36 253.6 30.3 257 201-531 80-355 (356)
120 2xyi_A Probable histone-bindin 100.0 3.1E-32 1.1E-36 276.2 28.0 249 204-535 125-412 (430)
121 2xyi_A Probable histone-bindin 100.0 1.1E-31 3.8E-36 272.1 30.2 246 287-572 123-407 (430)
122 1l0q_A Surface layer protein; 100.0 8.1E-30 2.8E-34 255.3 42.7 329 123-562 3-365 (391)
123 3bws_A Protein LP49; two-domai 100.0 3.4E-30 1.2E-34 261.7 37.6 277 209-533 124-432 (433)
124 3lrv_A PRE-mRNA-splicing facto 100.0 8.3E-32 2.9E-36 264.6 24.6 268 117-531 43-331 (343)
125 1k32_A Tricorn protease; prote 100.0 1.6E-30 5.4E-35 292.4 37.6 360 104-572 46-499 (1045)
126 1l0q_A Surface layer protein; 100.0 1.3E-29 4.4E-34 253.8 40.1 302 221-572 4-339 (391)
127 2pm7_B Protein transport prote 100.0 7.5E-31 2.6E-35 252.2 26.8 205 333-572 3-235 (297)
128 1nir_A Nitrite reductase; hemo 100.0 2.8E-29 9.7E-34 260.3 37.6 327 117-543 144-524 (543)
129 1k32_A Tricorn protease; prote 100.0 1.5E-28 5.2E-33 276.3 38.3 387 109-572 13-458 (1045)
130 1nir_A Nitrite reductase; hemo 100.0 6.4E-28 2.2E-32 250.1 34.6 315 215-573 145-512 (543)
131 2hqs_A Protein TOLB; TOLB, PAL 100.0 9.5E-29 3.3E-33 248.7 26.9 247 219-556 143-409 (415)
132 2ecf_A Dipeptidyl peptidase IV 100.0 4.2E-27 1.4E-31 255.9 30.6 346 110-534 36-460 (741)
133 2ecf_A Dipeptidyl peptidase IV 100.0 2E-26 7E-31 250.5 34.7 316 207-572 36-456 (741)
134 1xfd_A DIP, dipeptidyl aminope 100.0 2.3E-27 7.9E-32 257.2 24.6 342 113-562 19-427 (723)
135 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.1E-25 3.9E-30 226.3 25.4 277 206-572 61-384 (415)
136 2z3z_A Dipeptidyl aminopeptida 99.9 2.4E-24 8.3E-29 232.8 32.5 283 207-535 81-437 (706)
137 2z3z_A Dipeptidyl aminopeptida 99.9 1E-23 3.5E-28 227.8 30.6 310 210-572 28-432 (706)
138 2ojh_A Uncharacterized protein 99.9 4.5E-24 1.6E-28 204.2 23.3 254 224-566 17-293 (297)
139 1xfd_A DIP, dipeptidyl aminope 99.9 9.4E-24 3.2E-28 228.8 23.9 310 209-572 18-390 (723)
140 2ojh_A Uncharacterized protein 99.9 1.3E-23 4.3E-28 201.1 21.6 232 205-524 39-293 (297)
141 3u4y_A Uncharacterized protein 99.9 2.1E-22 7E-27 196.5 29.7 275 214-572 4-301 (331)
142 3u4y_A Uncharacterized protein 99.9 3.3E-22 1.1E-26 195.0 30.8 279 117-536 4-307 (331)
143 1z68_A Fibroblast activation p 99.9 2.7E-23 9.1E-28 225.0 23.4 319 115-536 20-446 (719)
144 3vgz_A Uncharacterized protein 99.9 1.6E-21 5.5E-26 191.8 33.3 273 208-565 41-334 (353)
145 1pby_B Quinohemoprotein amine 99.9 4.2E-22 1.5E-26 194.5 28.8 285 220-543 2-320 (337)
146 1ri6_A Putative isomerase YBHE 99.9 4.3E-22 1.5E-26 195.0 28.0 290 222-557 8-335 (343)
147 3o4h_A Acylamino-acid-releasin 99.9 1E-22 3.6E-27 214.7 24.5 267 207-572 21-312 (582)
148 3vgz_A Uncharacterized protein 99.9 5.1E-21 1.8E-25 188.2 33.6 270 110-524 40-335 (353)
149 4a5s_A Dipeptidyl peptidase 4 99.9 1.7E-20 5.8E-25 203.2 34.8 347 112-562 18-433 (740)
150 1z68_A Fibroblast activation p 99.9 9E-22 3.1E-26 213.0 24.6 311 212-572 20-440 (719)
151 1ri6_A Putative isomerase YBHE 99.9 5.8E-21 2E-25 186.9 27.3 266 262-572 5-305 (343)
152 3o4h_A Acylamino-acid-releasin 99.9 9.8E-22 3.4E-26 207.2 22.8 268 109-533 20-315 (582)
153 1pby_B Quinohemoprotein amine 99.9 1.7E-20 5.8E-25 183.1 26.9 272 123-501 2-320 (337)
154 1jmx_B Amine dehydrogenase; ox 99.9 1.4E-20 4.9E-25 184.6 26.2 298 212-543 4-335 (349)
155 3scy_A Hypothetical bacterial 99.9 2.1E-18 7.2E-23 170.2 35.8 264 207-553 49-360 (361)
156 2oit_A Nucleoporin 214KDA; NH2 99.9 3.9E-20 1.4E-24 186.5 21.5 239 207-564 36-321 (434)
157 2oit_A Nucleoporin 214KDA; NH2 99.8 2E-20 6.9E-25 188.6 19.0 214 109-370 35-279 (434)
158 3pe7_A Oligogalacturonate lyas 99.8 1.4E-19 4.8E-24 180.5 24.9 293 233-572 14-379 (388)
159 1jmx_B Amine dehydrogenase; ox 99.8 3.9E-19 1.3E-23 174.4 27.7 284 115-501 4-335 (349)
160 2oiz_A Aromatic amine dehydrog 99.8 1.4E-18 4.8E-23 170.9 30.5 296 218-557 14-360 (361)
161 3hfq_A Uncharacterized protein 99.8 2E-18 6.7E-23 169.4 30.0 267 227-536 14-322 (347)
162 3hfq_A Uncharacterized protein 99.8 1.6E-18 5.3E-23 170.1 28.6 269 270-572 15-314 (347)
163 3scy_A Hypothetical bacterial 99.8 1.3E-17 4.3E-22 164.6 30.8 282 260-572 12-334 (361)
164 4a5s_A Dipeptidyl peptidase 4 99.8 1.4E-18 4.8E-23 188.1 25.0 299 209-563 18-381 (740)
165 3pe7_A Oligogalacturonate lyas 99.8 6.2E-18 2.1E-22 168.6 26.1 285 203-531 26-380 (388)
166 3azo_A Aminopeptidase; POP fam 99.8 6.6E-18 2.2E-22 180.9 25.3 302 105-501 18-379 (662)
167 1jof_A Carboxy-CIS,CIS-muconat 99.8 2E-17 6.9E-22 163.3 25.4 259 229-572 14-338 (365)
168 2oiz_A Aromatic amine dehydrog 99.8 7.6E-17 2.6E-21 158.5 28.6 266 212-515 54-360 (361)
169 3azo_A Aminopeptidase; POP fam 99.8 5.6E-17 1.9E-21 173.7 25.9 285 203-536 19-372 (662)
170 3c5m_A Oligogalacturonate lyas 99.8 2.2E-17 7.4E-22 165.0 20.5 295 109-531 34-380 (396)
171 3c5m_A Oligogalacturonate lyas 99.8 2.8E-17 9.4E-22 164.2 20.9 290 233-571 14-378 (396)
172 1q7f_A NHL, brain tumor CG1071 99.7 2.7E-15 9.2E-20 142.6 31.8 242 202-534 24-281 (286)
173 3fvz_A Peptidyl-glycine alpha- 99.7 1.4E-15 4.9E-20 147.7 30.0 244 207-533 23-322 (329)
174 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.3E-16 4.5E-21 157.5 21.3 249 208-534 40-342 (365)
175 2gop_A Trilobed protease; beta 99.7 3E-15 1E-19 146.6 30.6 270 208-546 15-342 (347)
176 1q7f_A NHL, brain tumor CG1071 99.7 1.2E-14 4.3E-19 138.0 32.0 234 290-572 27-277 (286)
177 3fvz_A Peptidyl-glycine alpha- 99.7 3E-15 1E-19 145.4 27.6 248 249-572 23-319 (329)
178 1qks_A Cytochrome CD1 nitrite 99.7 1E-13 3.6E-18 143.1 40.3 328 120-542 165-547 (567)
179 2dg1_A DRP35, lactonase; beta 99.7 8.7E-15 3E-19 142.4 28.3 274 112-523 7-300 (333)
180 2z2n_A Virginiamycin B lyase; 99.7 6.6E-13 2.3E-17 126.7 40.9 283 203-535 10-297 (299)
181 2dg1_A DRP35, lactonase; beta 99.7 3.4E-15 1.2E-19 145.3 24.9 273 208-565 6-300 (333)
182 2z2n_A Virginiamycin B lyase; 99.7 1.3E-12 4.5E-17 124.6 39.7 275 247-570 12-291 (299)
183 2gop_A Trilobed protease; beta 99.7 4.2E-14 1.4E-18 138.4 29.0 252 251-572 16-328 (347)
184 1qks_A Cytochrome CD1 nitrite 99.7 5.2E-13 1.8E-17 137.9 37.7 314 217-572 165-535 (567)
185 2xdw_A Prolyl endopeptidase; a 99.7 3.9E-14 1.3E-18 152.5 29.1 246 205-535 122-416 (710)
186 2bkl_A Prolyl endopeptidase; m 99.6 1.3E-14 4.5E-19 155.8 24.3 208 107-377 117-358 (695)
187 2xdw_A Prolyl endopeptidase; a 99.6 5.5E-14 1.9E-18 151.4 26.9 286 217-572 81-411 (710)
188 2bkl_A Prolyl endopeptidase; m 99.6 3.2E-14 1.1E-18 152.8 24.4 274 216-536 76-400 (695)
189 2qc5_A Streptogramin B lactona 99.6 2.3E-11 7.9E-16 115.9 38.9 278 204-531 16-298 (300)
190 3dsm_A Uncharacterized protein 99.6 1.7E-12 5.8E-17 125.7 30.6 264 227-541 15-309 (328)
191 3dsm_A Uncharacterized protein 99.6 1.7E-12 6E-17 125.6 29.4 255 269-572 15-299 (328)
192 3e5z_A Putative gluconolactona 99.6 8.9E-13 3E-17 125.8 26.5 229 291-570 26-282 (296)
193 1rwi_B Serine/threonine-protei 99.6 1.4E-12 4.7E-17 122.5 27.1 242 209-536 25-267 (270)
194 3e5z_A Putative gluconolactona 99.6 1.4E-12 4.7E-17 124.5 27.5 242 243-536 21-289 (296)
195 2qc5_A Streptogramin B lactona 99.6 5.4E-11 1.8E-15 113.4 38.1 274 248-571 18-296 (300)
196 1rwi_B Serine/threonine-protei 99.6 2.2E-12 7.6E-17 121.1 27.2 236 294-572 25-261 (270)
197 2mad_H Methylamine dehydrogena 99.6 6E-11 2E-15 116.4 38.0 283 214-539 27-356 (373)
198 3sjl_D Methylamine dehydrogena 99.6 4.2E-12 1.4E-16 122.9 29.0 299 213-555 38-384 (386)
199 3no2_A Uncharacterized protein 99.5 3.3E-12 1.1E-16 120.0 26.3 220 218-521 4-231 (276)
200 3no2_A Uncharacterized protein 99.5 2.5E-12 8.7E-17 120.8 25.5 212 308-562 4-230 (276)
201 1yr2_A Prolyl oligopeptidase; 99.5 1.9E-12 6.4E-17 140.0 25.3 219 108-389 160-415 (741)
202 1yr2_A Prolyl oligopeptidase; 99.5 2.4E-12 8.3E-17 139.2 24.7 283 216-572 115-438 (741)
203 2mad_H Methylamine dehydrogena 99.5 6.3E-10 2.1E-14 109.2 37.5 248 212-498 70-357 (373)
204 3sjl_D Methylamine dehydrogena 99.5 2.5E-11 8.5E-16 117.5 26.7 261 213-513 83-384 (386)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 9.1E-11 3.1E-15 112.7 28.6 232 295-572 20-296 (314)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 1E-10 3.5E-15 112.3 28.9 242 208-533 18-299 (314)
207 3c75_H MADH, methylamine dehyd 99.4 1.5E-10 5.1E-15 114.2 27.9 282 217-540 82-409 (426)
208 1xip_A Nucleoporin NUP159; bet 99.4 4.1E-11 1.4E-15 116.5 20.8 180 112-355 39-229 (388)
209 3iuj_A Prolyl endopeptidase; h 99.4 8.1E-11 2.8E-15 126.0 24.7 115 108-281 126-269 (693)
210 3hrp_A Uncharacterized protein 99.4 9.4E-10 3.2E-14 109.5 30.4 233 250-531 131-408 (409)
211 3q7m_A Lipoprotein YFGL, BAMB; 99.4 7.8E-10 2.7E-14 109.2 29.4 308 219-572 53-375 (376)
212 1yiq_A Quinohemoprotein alcoho 99.3 8.4E-11 2.9E-15 125.0 22.8 306 219-560 70-533 (689)
213 3q7m_A Lipoprotein YFGL, BAMB; 99.3 1.2E-09 4.2E-14 107.8 28.4 261 218-530 102-375 (376)
214 2qe8_A Uncharacterized protein 99.3 2.1E-10 7.1E-15 111.7 21.0 263 250-568 17-314 (343)
215 3g4e_A Regucalcin; six bladed 99.3 4.5E-09 1.6E-13 99.9 29.8 222 295-563 15-260 (297)
216 1mda_H Methylamine dehydrogena 99.3 2.3E-10 8E-15 111.0 20.5 256 212-553 69-365 (368)
217 1xip_A Nucleoporin NUP159; bet 99.3 2.4E-10 8E-15 111.2 20.3 170 209-397 39-230 (388)
218 3g4e_A Regucalcin; six bladed 99.3 5.5E-09 1.9E-13 99.4 29.6 227 248-522 11-261 (297)
219 1kb0_A Quinohemoprotein alcoho 99.3 4.5E-10 1.5E-14 119.2 24.0 307 219-561 77-536 (677)
220 3iuj_A Prolyl endopeptidase; h 99.2 4.1E-10 1.4E-14 120.6 20.7 102 468-572 287-402 (693)
221 2ghs_A AGR_C_1268P; regucalcin 99.2 1.9E-08 6.5E-13 97.0 30.2 209 310-563 62-290 (326)
222 2qe8_A Uncharacterized protein 99.2 1.3E-09 4.6E-14 106.0 22.0 267 208-529 17-317 (343)
223 3hrp_A Uncharacterized protein 99.2 1.1E-08 3.9E-13 101.6 27.9 250 207-489 130-408 (409)
224 3c75_H MADH, methylamine dehyd 99.2 9.5E-09 3.3E-13 101.3 25.5 246 212-498 122-409 (426)
225 4a2l_A BT_4663, two-component 99.1 1.9E-06 6.4E-11 93.9 45.0 347 210-571 133-522 (795)
226 2ghs_A AGR_C_1268P; regucalcin 99.1 5E-08 1.7E-12 94.0 28.5 223 252-523 51-292 (326)
227 3hxj_A Pyrrolo-quinoline quino 99.1 1.8E-09 6E-14 104.4 17.9 294 215-571 27-320 (330)
228 1yiq_A Quinohemoprotein alcoho 99.1 1.7E-08 5.8E-13 107.3 26.4 286 219-521 121-537 (689)
229 4a2l_A BT_4663, two-component 99.1 5.2E-06 1.8E-10 90.4 46.6 310 207-571 214-567 (795)
230 3dr2_A Exported gluconolactona 99.1 2.8E-08 9.7E-13 94.8 23.4 233 243-527 38-301 (305)
231 3dr2_A Exported gluconolactona 99.1 4.5E-08 1.5E-12 93.4 24.3 226 293-570 45-302 (305)
232 2hz6_A Endoplasmic reticulum t 99.0 3.9E-10 1.3E-14 110.7 8.6 110 218-335 8-118 (369)
233 1kb0_A Quinohemoprotein alcoho 99.0 2.7E-08 9.4E-13 105.5 22.7 301 261-572 77-504 (677)
234 2hz6_A Endoplasmic reticulum t 99.0 1.4E-10 4.7E-15 114.0 4.4 187 121-377 8-200 (369)
235 3hxj_A Pyrrolo-quinoline quino 99.0 1.4E-08 4.7E-13 98.1 18.5 264 209-533 61-324 (330)
236 1kv9_A Type II quinohemoprotei 98.9 1.5E-07 5.2E-12 99.7 23.5 309 219-563 66-520 (668)
237 1mda_H Methylamine dehydrogena 98.9 2.2E-07 7.4E-12 90.1 20.4 102 469-572 219-343 (368)
238 3v9f_A Two-component system se 98.8 0.00027 9.2E-09 76.6 47.3 349 208-572 163-565 (781)
239 3v9f_A Two-component system se 98.7 0.00069 2.3E-08 73.4 51.2 346 208-566 115-516 (781)
240 1w6s_A Methanol dehydrogenase 98.7 3.7E-06 1.3E-10 87.1 25.5 309 219-559 62-530 (599)
241 2ad6_A Methanol dehydrogenase 98.7 3.1E-06 1.1E-10 87.7 24.6 306 219-561 62-523 (571)
242 2ece_A 462AA long hypothetical 98.7 5.2E-06 1.8E-10 81.0 22.7 215 311-563 98-399 (462)
243 1flg_A Protein (quinoprotein e 98.6 1.2E-05 4.2E-10 83.4 26.9 79 481-560 465-544 (582)
244 2ece_A 462AA long hypothetical 98.6 2.4E-05 8.1E-10 76.4 25.9 146 217-369 93-289 (462)
245 1k3i_A Galactose oxidase precu 98.5 1.3E-05 4.4E-10 85.1 24.3 275 212-522 190-530 (656)
246 2iwa_A Glutamine cyclotransfer 98.5 1.2E-05 4E-10 73.6 20.5 186 342-569 23-231 (266)
247 1kv9_A Type II quinohemoprotei 98.5 6.8E-06 2.3E-10 87.1 21.5 298 261-572 66-485 (668)
248 1npe_A Nidogen, entactin; glyc 98.5 0.00024 8.1E-09 65.8 28.7 250 262-557 2-263 (267)
249 1npe_A Nidogen, entactin; glyc 98.4 0.00033 1.1E-08 64.8 28.7 248 221-515 3-263 (267)
250 3s94_A LRP-6, low-density lipo 98.4 0.0033 1.1E-07 65.6 38.5 336 209-559 85-449 (619)
251 3nol_A Glutamine cyclotransfer 98.4 4.6E-05 1.6E-09 68.8 20.0 181 342-565 45-245 (262)
252 3nok_A Glutaminyl cyclase; bet 98.4 5.5E-05 1.9E-09 68.3 20.4 179 342-564 57-254 (268)
253 2iwa_A Glutamine cyclotransfer 98.4 0.00021 7.3E-09 65.2 24.7 194 295-534 23-238 (266)
254 2xe4_A Oligopeptidase B; hydro 98.3 4.5E-05 1.5E-09 82.1 22.8 195 108-365 170-394 (751)
255 2p4o_A Hypothetical protein; p 98.3 0.0014 4.9E-08 61.9 30.9 235 250-524 32-279 (306)
256 1fwx_A Nitrous oxide reductase 98.3 1.4E-05 4.8E-10 80.8 17.1 250 308-564 100-407 (595)
257 2fp8_A Strictosidine synthase; 98.3 0.00027 9.3E-09 67.5 25.3 235 252-533 21-313 (322)
258 2ad6_A Methanol dehydrogenase 98.3 0.00012 3.9E-09 75.9 23.8 303 261-572 62-491 (571)
259 1flg_A Protein (quinoprotein e 98.3 0.00056 1.9E-08 70.9 28.8 83 437-521 464-548 (582)
260 1k3i_A Galactose oxidase precu 98.3 0.00013 4.5E-09 77.3 24.5 272 254-564 190-530 (656)
261 1fwx_A Nitrous oxide reductase 98.3 0.00015 5.2E-09 73.4 22.6 131 438-572 174-358 (595)
262 3mbr_X Glutamine cyclotransfer 98.3 0.00036 1.2E-08 62.4 22.6 180 342-564 23-223 (243)
263 3nol_A Glutamine cyclotransfer 98.2 0.00024 8.4E-09 64.1 20.9 172 309-522 53-244 (262)
264 2p4o_A Hypothetical protein; p 98.2 0.0053 1.8E-07 57.9 30.6 230 208-482 32-279 (306)
265 3nok_A Glutaminyl cyclase; bet 98.1 0.00051 1.7E-08 62.0 21.0 171 309-522 65-254 (268)
266 1w6s_A Methanol dehydrogenase 98.1 0.0004 1.4E-08 71.9 23.3 113 261-375 62-197 (599)
267 2fp8_A Strictosidine synthase; 98.1 0.0019 6.4E-08 61.6 24.9 237 308-572 29-310 (322)
268 2xbg_A YCF48-like protein; pho 98.0 0.011 3.9E-07 56.2 35.2 140 427-572 172-319 (327)
269 3mbr_X Glutamine cyclotransfer 98.0 0.0022 7.5E-08 57.3 22.3 181 294-522 22-223 (243)
270 2xe4_A Oligopeptidase B; hydro 97.9 0.00069 2.4E-08 72.8 21.7 156 205-368 170-353 (751)
271 3qqz_A Putative uncharacterize 97.9 0.0053 1.8E-07 55.6 22.8 202 105-366 21-250 (255)
272 4a0p_A LRP6, LRP-6, low-densit 97.8 0.052 1.8E-06 56.6 43.2 332 210-558 82-445 (628)
273 2xbg_A YCF48-like protein; pho 97.8 0.03 1E-06 53.2 31.3 148 208-366 80-231 (327)
274 3v65_B Low-density lipoprotein 97.8 0.022 7.7E-07 55.6 27.1 241 254-541 81-326 (386)
275 3v65_B Low-density lipoprotein 97.7 0.023 8E-07 55.4 26.4 161 211-376 162-325 (386)
276 3v64_C Agrin; beta propeller, 97.7 0.041 1.4E-06 52.8 28.6 226 271-540 53-282 (349)
277 3ei3_A DNA damage-binding prot 97.6 0.14 4.6E-06 57.4 37.5 331 230-572 493-910 (1158)
278 3v64_C Agrin; beta propeller, 97.6 0.06 2.1E-06 51.6 29.0 162 210-376 118-282 (349)
279 1ijq_A LDL receptor, low-densi 97.4 0.082 2.8E-06 49.9 31.0 229 228-499 9-246 (316)
280 3sov_A LRP-6, low-density lipo 97.4 0.099 3.4E-06 49.3 25.2 230 228-499 12-246 (318)
281 3p5b_L Low density lipoprotein 97.3 0.13 4.6E-06 50.3 30.0 165 208-377 159-328 (400)
282 3tc9_A Hypothetical hydrolase; 97.3 0.067 2.3E-06 53.0 24.5 152 209-367 138-299 (430)
283 3sov_A LRP-6, low-density lipo 97.3 0.086 2.9E-06 49.8 24.2 162 210-376 81-245 (318)
284 3qqz_A Putative uncharacterize 97.2 0.11 3.7E-06 46.9 24.7 117 245-368 22-150 (255)
285 4hw6_A Hypothetical protein, I 97.2 0.084 2.9E-06 52.3 23.0 144 426-571 236-429 (433)
286 4hw6_A Hypothetical protein, I 97.2 0.13 4.5E-06 50.9 24.3 234 252-532 141-432 (433)
287 3m0c_C LDL receptor, low-densi 97.1 0.32 1.1E-05 52.0 28.4 163 209-376 472-639 (791)
288 3p5b_L Low density lipoprotein 97.1 0.23 8E-06 48.5 31.8 246 221-509 85-338 (400)
289 2p9w_A MAL S 1 allergenic prot 97.1 0.11 3.8E-06 48.5 21.5 96 438-534 99-216 (334)
290 3amr_A 3-phytase; beta-propell 97.1 0.2 7E-06 47.2 23.0 109 431-540 145-271 (355)
291 1ijq_A LDL receptor, low-densi 96.9 0.28 9.7E-06 46.1 29.9 214 318-571 9-234 (316)
292 1n7d_A LDL receptor, low-densi 96.9 0.01 3.4E-07 63.0 13.9 241 228-511 385-634 (699)
293 3tc9_A Hypothetical hydrolase; 96.8 0.023 7.7E-07 56.4 14.6 138 430-572 150-298 (430)
294 3amr_A 3-phytase; beta-propell 96.7 0.39 1.3E-05 45.3 22.8 142 218-368 39-209 (355)
295 3m0c_C LDL receptor, low-densi 96.7 0.82 2.8E-05 48.9 29.8 229 227-498 402-639 (791)
296 3kya_A Putative phosphatase; s 96.7 0.59 2E-05 46.6 24.9 153 209-366 140-338 (496)
297 2p9w_A MAL S 1 allergenic prot 96.7 0.051 1.7E-06 50.8 15.2 144 429-572 25-212 (334)
298 1n7d_A LDL receptor, low-densi 96.5 0.013 4.5E-07 62.0 11.3 162 211-377 456-622 (699)
299 2ism_A Putative oxidoreductase 96.3 0.81 2.8E-05 43.7 22.3 70 209-281 32-115 (352)
300 3pbp_A Nucleoporin NUP82; beta 96.3 0.21 7.3E-06 48.1 17.1 141 426-569 29-206 (452)
301 4a0p_A LRP6, LRP-6, low-densit 96.2 1.4 4.8E-05 45.8 27.9 228 263-536 8-240 (628)
302 3sre_A PON1, serum paraoxonase 96.2 0.72 2.5E-05 43.9 20.4 124 438-565 138-287 (355)
303 3ei3_A DNA damage-binding prot 95.8 3.2 0.00011 46.5 38.4 139 429-572 844-996 (1158)
304 3s94_A LRP-6, low-density lipo 95.8 2.1 7.3E-05 44.3 39.1 134 428-563 360-497 (619)
305 3pbp_A Nucleoporin NUP82; beta 95.7 1.2 4.1E-05 43.1 19.5 142 216-362 29-205 (452)
306 2vpj_A Kelch-like protein 12; 95.5 1 3.6E-05 41.6 18.5 133 428-566 112-264 (301)
307 2vpj_A Kelch-like protein 12; 95.2 1.9 6.4E-05 39.9 20.0 104 428-535 159-280 (301)
308 3kya_A Putative phosphatase; s 94.9 0.51 1.7E-05 47.1 14.7 140 430-571 153-337 (496)
309 1tl2_A L10, protein (tachylect 94.7 0.45 1.5E-05 41.4 11.8 131 430-569 5-157 (236)
310 3sre_A PON1, serum paraoxonase 94.5 1.1 3.7E-05 42.7 15.5 135 437-572 81-249 (355)
311 2xn4_A Kelch-like protein 2; s 94.4 3.1 0.00011 38.4 18.7 133 428-566 108-262 (302)
312 2be1_A Serine/threonine-protei 93.9 0.79 2.7E-05 43.2 13.0 114 262-377 11-138 (339)
313 1tl2_A L10, protein (tachylect 93.9 2.3 8E-05 37.0 14.7 136 424-568 47-203 (236)
314 2xzh_A Clathrin heavy chain 1; 93.7 4.4 0.00015 37.7 26.8 73 464-536 263-335 (365)
315 3ii7_A Kelch-like protein 7; p 93.7 4.3 0.00015 37.5 18.4 132 428-565 101-257 (306)
316 1zgk_A Kelch-like ECH-associat 93.7 3.1 0.0001 38.6 16.9 133 428-566 121-273 (308)
317 2xn4_A Kelch-like protein 2; s 93.5 4.5 0.00015 37.2 20.2 63 471-535 204-278 (302)
318 2ism_A Putative oxidoreductase 93.2 5.8 0.0002 37.6 26.5 59 504-563 269-333 (352)
319 3a9g_A Putative uncharacterize 93.2 6 0.0002 37.6 24.5 72 208-281 29-115 (354)
320 3ott_A Two-component system se 93.1 11 0.00037 40.2 34.1 264 249-566 21-299 (758)
321 4asc_A Kelch repeat and BTB do 92.9 5.8 0.0002 36.8 18.5 92 470-565 147-253 (315)
322 3das_A Putative oxidoreductase 92.6 1.8 6.3E-05 40.9 13.4 101 462-564 33-159 (347)
323 3ii7_A Kelch-like protein 7; p 92.5 6.4 0.00022 36.2 21.6 104 221-333 14-132 (306)
324 1zgk_A Kelch-like ECH-associat 91.4 8.7 0.0003 35.4 19.8 103 429-535 169-289 (308)
325 2woz_A Kelch repeat and BTB do 90.9 10 0.00034 35.2 18.6 132 428-565 109-263 (318)
326 2xzh_A Clathrin heavy chain 1; 90.7 11 0.00036 35.2 30.3 217 310-568 79-325 (365)
327 1bpo_A Protein (clathrin); cla 90.6 13 0.00045 36.1 27.7 73 463-535 261-333 (494)
328 2g8s_A Glucose/sorbosone dehyd 90.1 13 0.00044 35.2 24.0 59 462-520 272-340 (353)
329 1cru_A Protein (soluble quinop 90.1 2.9 0.0001 41.4 12.5 102 463-564 29-163 (454)
330 1cru_A Protein (soluble quinop 89.1 17 0.0006 35.7 17.2 97 425-521 34-162 (454)
331 3a9g_A Putative uncharacterize 88.9 16 0.00055 34.6 25.4 60 504-563 260-330 (354)
332 3sbq_A Nitrous-oxide reductase 88.6 2.1 7E-05 42.9 9.7 120 441-563 300-453 (638)
333 1xi4_A Clathrin heavy chain; a 87.7 43 0.0015 38.1 21.3 196 317-553 84-309 (1630)
334 2g8s_A Glucose/sorbosone dehyd 87.6 1.9 6.5E-05 41.1 8.9 98 463-564 20-149 (353)
335 4asc_A Kelch repeat and BTB do 87.4 18 0.0006 33.4 21.7 104 428-535 148-279 (315)
336 1xi4_A Clathrin heavy chain; a 86.0 40 0.0014 38.3 18.7 70 464-533 262-331 (1630)
337 1bpo_A Protein (clathrin); cla 85.9 27 0.00092 34.0 32.0 217 310-568 78-324 (494)
338 2be1_A Serine/threonine-protei 84.0 4.6 0.00016 38.0 9.2 117 350-500 10-139 (339)
339 2uvk_A YJHT; unknown function, 82.5 19 0.00063 33.9 13.4 125 439-566 168-327 (357)
340 2wg3_C Hedgehog-interacting pr 82.0 15 0.00051 36.3 12.5 101 463-565 16-159 (463)
341 3das_A Putative oxidoreductase 81.4 36 0.0012 32.0 26.3 73 208-280 32-116 (347)
342 3qhy_B Beta-lactamase inhibito 80.9 32 0.0011 31.2 21.2 50 318-369 41-90 (282)
343 3sbq_A Nitrous-oxide reductase 76.8 7.6 0.00026 39.0 8.2 68 212-280 327-408 (638)
344 2wg3_C Hedgehog-interacting pr 75.2 57 0.0019 32.1 14.3 28 113-140 16-44 (463)
345 2woz_A Kelch repeat and BTB do 73.3 21 0.00072 32.9 10.4 101 431-535 18-138 (318)
346 2zwa_A Leucine carboxyl methyl 72.4 34 0.0012 35.8 12.8 136 428-564 397-559 (695)
347 4gdk_A Ubiquitin-like protein 71.5 15 0.00051 26.7 6.7 56 10-65 3-60 (91)
348 4gq2_M Nucleoporin NUP120; bet 68.4 4.8 0.00017 44.1 5.2 36 112-147 237-272 (950)
349 2zwa_A Leucine carboxyl methyl 67.1 30 0.001 36.3 10.9 107 428-535 451-579 (695)
350 4gq2_M Nucleoporin NUP120; bet 64.5 25 0.00086 38.4 9.9 38 208-245 236-273 (950)
351 2uvk_A YJHT; unknown function, 63.4 39 0.0013 31.6 10.2 49 482-531 168-224 (357)
352 3s25_A Hypothetical 7-bladed b 61.3 39 0.0013 31.0 9.3 110 439-563 88-202 (302)
353 3zwu_A Alkaline phosphatase PH 60.8 30 0.001 35.2 9.0 58 463-520 478-548 (592)
354 2jx5_A GLUB(S27A); ubiquitin, 59.7 8.8 0.0003 24.1 3.0 41 12-62 2-42 (69)
355 4a9v_A PHOX; hydrolase, beta-p 59.3 47 0.0016 33.5 9.8 60 462-521 477-549 (592)
356 3zwu_A Alkaline phosphatase PH 59.1 20 0.00068 36.6 7.3 58 505-562 478-548 (592)
357 3f7f_A Nucleoporin NUP120; nuc 56.8 12 0.0004 38.9 5.2 34 112-147 223-256 (729)
358 3b7f_A Glycosyl hydrolase, BNR 56.5 1.3E+02 0.0046 28.4 16.3 98 430-529 23-143 (394)
359 4fhn_B Nucleoporin NUP120; pro 56.5 5.7 0.00019 44.6 3.1 36 112-147 239-274 (1139)
360 3ott_A Two-component system se 48.2 2.6E+02 0.009 29.2 49.9 340 209-566 104-494 (758)
361 4a20_A Ubiquitin-like protein 45.2 54 0.0019 24.0 6.0 44 4-47 11-55 (98)
362 3f7f_A Nucleoporin NUP120; nuc 42.8 43 0.0015 34.8 6.7 35 209-245 223-257 (729)
363 4a9v_A PHOX; hydrolase, beta-p 41.6 1.3E+02 0.0044 30.4 9.7 62 208-269 476-550 (592)
364 3w1s_C Ubiquitin-like protein 40.0 77 0.0026 22.9 5.9 55 7-64 3-59 (91)
365 4fhn_B Nucleoporin NUP120; pro 39.3 20 0.00069 40.2 4.1 37 209-245 239-275 (1139)
366 3s25_A Hypothetical 7-bladed b 36.5 2.5E+02 0.0084 25.5 19.2 88 466-562 150-240 (302)
367 1wz3_A Autophagy 12B, ATG12B, 25.0 2E+02 0.0068 20.9 6.0 50 10-62 11-62 (96)
368 2i1s_A Hypothetical protein; m 24.0 1.4E+02 0.0048 25.0 5.9 51 12-63 10-60 (188)
369 3uc1_A DNA gyrase subunit A; D 22.0 4.6E+02 0.016 24.0 14.8 112 456-569 91-222 (327)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.9e-60 Score=501.06 Aligned_cols=450 Identities=21% Similarity=0.313 Sum_probs=346.4
Q ss_pred ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCccee--eecCCCe-eeeecccccccccccccCCCCCCcc
Q psy2671 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF--KCEGTPY-LFYVNETEITKTLADVLPLDTLNTE 178 (573)
Q Consensus 102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (573)
....+.||.++|++++|+|+|++||||+.|++|||||+.+++... ...++.. +.... ..+.+
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~---------------fs~dg 115 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDIS---------------WDSES 115 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEE---------------ECTTS
T ss_pred cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEE---------------ECCCC
Confidence 445678999999999999999999999999999999997654321 2221110 00000 00111
Q ss_pred ceEEEEEec-e--eeEEEeeccccccCCCCCCCcEEEEEEcCCCC-eEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEE
Q psy2671 179 EVVDIVYQK-Q--AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR-SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLC 254 (573)
Q Consensus 179 ~~~~~~~~~-~--~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~-~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~ 254 (573)
..+...... . ....+.....+...+.||.+.|.+++|+|++. .|++|+.|++|++||..+++.+..+.+|...|.+
T Consensus 116 ~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~ 195 (611)
T 1nr0_A 116 KRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHS 195 (611)
T ss_dssp CEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEE
T ss_pred CEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEE
Confidence 111111100 0 11222223445567899999999999999987 5999999999999999999888999999999999
Q ss_pred EEEcCCCCeEEEEeeCCeEEEEECCCCceeccccc------CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC
Q psy2671 255 IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMR------GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328 (573)
Q Consensus 255 v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 328 (573)
++|+|||++|++|+.|++|++||..+++.+..... +|...|.+++|.| ++++|++++.|++|++||+.+
T Consensus 196 v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-----dg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 196 VRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-----DGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-----TSSEEEEEETTSEEEEEETTT
T ss_pred EEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-----CCCEEEEEeCCCeEEEEeCCC
Confidence 99999999999999999999999998876543222 8999999999987 678999999999999999987
Q ss_pred CeEEE-------------------------------------------EecCCCccEEEEEECCCc-EEEEEeCCCeEEE
Q psy2671 329 SQCVR-------------------------------------------VLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364 (573)
Q Consensus 329 ~~~~~-------------------------------------------~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~v 364 (573)
+++.. .+.+|...|.+++|++++ .+++++.|++|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~ 350 (611)
T 1nr0_A 271 LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINS 350 (611)
T ss_dssp TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEE
Confidence 65443 345799999999999887 7999999999999
Q ss_pred EeCCCCeeeEec-cCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchh------------------------------
Q psy2671 365 WRASDGVMCRTL-EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE------------------------------ 413 (573)
Q Consensus 365 w~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~------------------------------ 413 (573)
||+.++.....+ .+|...+..++++++..+...........|+......
T Consensus 351 Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~ 430 (611)
T 1nr0_A 351 WDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC 430 (611)
T ss_dssp EETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE
T ss_pred EECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEe
Confidence 999998877665 6788999999988765444332221111121110000
Q ss_pred ---------h-----hhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee
Q psy2671 414 ---------S-----SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479 (573)
Q Consensus 414 ---------~-----~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s 479 (573)
. .........+++|+|.++++|+.|++|++||+...........+|...|++|+|+|||++||+++
T Consensus 431 ~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s 510 (611)
T 1nr0_A 431 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATD 510 (611)
T ss_dssp SSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred CceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEc
Confidence 0 00000112345799999999999999999998765322222367999999999999999999999
Q ss_pred CCCcEEEEeCCC-CeEEEe--ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc-cc-ccccCc-CCCEEEEEEc
Q psy2671 480 FDKSIKLWDGRI-GKFITT--LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK-IE-QDLPGH-GDEVYAVDWA 553 (573)
Q Consensus 480 ~dg~i~lwd~~~-~~~~~~--~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~-~~-~~l~~h-~~~v~~~~~s 553 (573)
.|++|++||..+ ++.+.. +.+|...|++++|+|||++||+|+.|++|++||+.++. .. ..+.+| .+.|++++|+
T Consensus 511 ~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs 590 (611)
T 1nr0_A 511 QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL 590 (611)
T ss_dssp TTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEE
T ss_pred CCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEc
Confidence 999999999987 665544 34599999999999999999999999999999998765 33 567899 8999999999
Q ss_pred cCCCEEEEeeCCCcEEEcc
Q psy2671 554 PDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 554 ~d~~~l~s~~~d~~i~iw~ 572 (573)
||++ |+++|.|++|++|+
T Consensus 591 ~d~~-l~s~~~D~~i~lW~ 608 (611)
T 1nr0_A 591 NETT-IVSAGQDSNIKFWN 608 (611)
T ss_dssp ETTE-EEEEETTSCEEEEE
T ss_pred CCCE-EEEecCCCCEEEEe
Confidence 9998 99999999999997
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.2e-54 Score=455.03 Aligned_cols=360 Identities=34% Similarity=0.580 Sum_probs=308.4
Q ss_pred cccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEEC
Q psy2671 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS 278 (573)
Q Consensus 199 ~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~ 278 (573)
+...+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+|+++.|++++.|+.|++|+.
T Consensus 213 ~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~ 291 (577)
T 2ymu_A 213 LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR 291 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC
Confidence 34456789999999999999999999999999999996 45677888999999999999999999999999999999997
Q ss_pred CCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEe
Q psy2671 279 STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSAS 357 (573)
Q Consensus 279 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s 357 (573)
.. +. ...+.+|...|.+++|.| +++.+++++.|++|++||... .....+.+|...+.+++|++++ .+++++
T Consensus 292 ~~-~~-~~~~~~h~~~v~~~~~~~-----~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 363 (577)
T 2ymu_A 292 NG-QL-LQTLTGHSSSVWGVAFSP-----DGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASAS 363 (577)
T ss_dssp TS-CE-EEEECCCSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CC-cE-EEEEecCCCCeEEEEECC-----CCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEe
Confidence 53 33 245678999999999876 568999999999999999754 4567788999999999999887 789999
Q ss_pred CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCcee-eCCCCchh--hhhhh-hhheeeeCCCCcEEE
Q psy2671 358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEE--SSKHA-LAKYQAQCPEGEKLV 433 (573)
Q Consensus 358 ~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~-~~~~~~~~~~~~~l~ 433 (573)
.|+.+++|+. ++.....+.+|...|..++++++....+....++.+. |+...... ...+. ......++|++.+++
T Consensus 364 ~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 442 (577)
T 2ymu_A 364 DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIA 442 (577)
T ss_dssp TTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred CCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEE
Confidence 9999999995 5677888999999999999999887666665555543 43221110 00011 111234679999999
Q ss_pred EEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCC
Q psy2671 434 SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD 513 (573)
Q Consensus 434 sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~d 513 (573)
+++.|+++++||... ..+..+.+|...|++++|+|++++||+++.|+.|++||. +++.+..+.+|...|++++|+||
T Consensus 443 ~~~~d~~v~~w~~~~--~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~d 519 (577)
T 2ymu_A 443 SASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPD 519 (577)
T ss_dssp EEETTSEEEEEETTS--CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTT
T ss_pred EEcCCCEEEEEECCC--CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCC
Confidence 999999999999643 456778899999999999999999999999999999994 68889999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 514 g~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
|++||+++.|+.|++||. +++.+..+.+|.+.|++++|+||+++|+|+|.|++|++|+
T Consensus 520 g~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 520 GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999999999999996 6778888999999999999999999999999999999996
No 3
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.3e-54 Score=458.67 Aligned_cols=401 Identities=21% Similarity=0.298 Sum_probs=325.4
Q ss_pred CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK 187 (573)
Q Consensus 108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
.+.+.+.+++|+|||++||+++ +++|+|||+.++...
T Consensus 16 ~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~------------------------------------------ 52 (611)
T 1nr0_A 16 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDT------------------------------------------ 52 (611)
T ss_dssp CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCC------------------------------------------
T ss_pred cccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccC------------------------------------------
Confidence 3677888999999999999998 569999999765432
Q ss_pred eeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcCCCCeEE
Q psy2671 188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPDSKQLV 265 (573)
Q Consensus 188 ~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~dg~~l~ 265 (573)
..+.||.+.|++++|+|+|++||+|+.|++|+|||+.+++ ....+.+|...|.+++|+|||++|+
T Consensus 53 -------------~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~ 119 (611)
T 1nr0_A 53 -------------EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIA 119 (611)
T ss_dssp -------------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEE
T ss_pred -------------eEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEE
Confidence 2356899999999999999999999999999999987543 3457789999999999999999999
Q ss_pred EEeeC----CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc
Q psy2671 266 SGCKN----GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341 (573)
Q Consensus 266 sgs~d----g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~ 341 (573)
+++.+ +.|++||. +... ..+.+|...|.+++|.|.. ..+|++++.|++|++||....++...+.+|...
T Consensus 120 ~~~~~~~~~~~v~~wd~--~~~~-~~l~gh~~~v~~v~f~p~~----~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~ 192 (611)
T 1nr0_A 120 AVGEGRERFGHVFLFDT--GTSN-GNLTGQARAMNSVDFKPSR----PFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKF 192 (611)
T ss_dssp EEECCSSCSEEEEETTT--CCBC-BCCCCCSSCEEEEEECSSS----SCEEEEEETTSCEEEEETTTBEEEEEECCCSSC
T ss_pred EEECCCCceeEEEEeeC--CCCc-ceecCCCCCceEEEECCCC----CeEEEEEeCCCeEEEEECCCCeEeeeeccccCc
Confidence 98875 47888874 4433 4578999999999998731 236999999999999999999999999999999
Q ss_pred EEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEecc-------CCcceeeEEEeccCceeEEEEcCCCcee-eCCCCch
Q psy2671 342 VTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLE-------GHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE 412 (573)
Q Consensus 342 v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~ 412 (573)
|.+++|++++ .+++++.|++|++|+..++.....+. +|...|.+++++++....+....++.++ |+.....
T Consensus 193 V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 193 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 9999999987 79999999999999999998887774 7999999999999887666665555443 3332110
Q ss_pred hhh----------------------------------------------hh-hhhheeeeCCCCcEEEEEeCCCeEEEEc
Q psy2671 413 ESS----------------------------------------------KH-ALAKYQAQCPEGEKLVSGSDDFTLFLWN 445 (573)
Q Consensus 413 ~~~----------------------------------------------~~-~~~~~~~~~~~~~~l~sg~~dg~i~lwd 445 (573)
... .| ......+++|++.+|++++.|++|++||
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 273 VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp EEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 000 00 0011123578999999999999999999
Q ss_pred CCCCccceee----------------------------------------------------------------------
Q psy2671 446 PEKEKKSLAR---------------------------------------------------------------------- 455 (573)
Q Consensus 446 ~~~~~~~~~~---------------------------------------------------------------------- 455 (573)
+.++......
T Consensus 353 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~ 432 (611)
T 1nr0_A 353 ISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYK 432 (611)
T ss_dssp TTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESS
T ss_pred CCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCc
Confidence 7653210000
Q ss_pred -----------eccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE--EEeecCCcceEEEEEECCCCCEEEEEeC
Q psy2671 456 -----------MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF--ITTLRGHVQAVYMVAWSSDSRLLVSGSA 522 (573)
Q Consensus 456 -----------~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~--~~~~~~h~~~v~~v~~s~dg~~las~s~ 522 (573)
...|...+.+++|+|||++||+|+.|++|++||...++. +.. .+|...|++++|||||++||+++.
T Consensus 433 ~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~ 511 (611)
T 1nr0_A 433 HIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQ 511 (611)
T ss_dssp EEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEET
T ss_pred eEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcC
Confidence 001234578999999999999999999999999887653 233 679999999999999999999999
Q ss_pred CCcEEEEeCCc-cccccc--ccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 523 DSTLKVWNMKT-KKIEQD--LPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 523 D~~v~vwd~~~-~~~~~~--l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
|++|++|++.+ +++... +.+|...|++++|+|||++|+++|.|++|++|+
T Consensus 512 d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~ 564 (611)
T 1nr0_A 512 SRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWN 564 (611)
T ss_dssp TSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEE
Confidence 99999999987 555543 345999999999999999999999999999997
No 4
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1e-53 Score=452.15 Aligned_cols=398 Identities=34% Similarity=0.599 Sum_probs=333.5
Q ss_pred cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV 184 (573)
Q Consensus 105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (573)
.|.||+++|++|+|||||++||||+.|++|+|||. +++++
T Consensus 11 ~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~--------------------------------------- 50 (577)
T 2ymu_A 11 RLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLL--------------------------------------- 50 (577)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEE---------------------------------------
T ss_pred EECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEE---------------------------------------
Confidence 57899999999999999999999999999999995 34322
Q ss_pred EeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeE
Q psy2671 185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264 (573)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l 264 (573)
.++.||.+.|++++|+|||++||+++.|++|+|||+ +++.+..+.+|...|.+++|+||+++|
T Consensus 51 ----------------~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l 113 (577)
T 2ymu_A 51 ----------------QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTI 113 (577)
T ss_dssp ----------------EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred ----------------EEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEE
Confidence 234589999999999999999999999999999996 567888999999999999999999999
Q ss_pred EEEeeCCeEEEEECCCCceecccccC-----------------------------------------CcccEEEEEeccc
Q psy2671 265 VSGCKNGVIHAWDSSTGKQIGQPMRG-----------------------------------------HKQWITALSWEPF 303 (573)
Q Consensus 265 ~sgs~dg~i~vwd~~~~~~~~~~~~~-----------------------------------------h~~~v~~~~~~~~ 303 (573)
++++.|+.+++|+....... ...+ |...|..+.+.
T Consensus 114 ~~~~~d~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 189 (577)
T 2ymu_A 114 ASASDDKTVKLWNRNGQLLQ--TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFS-- 189 (577)
T ss_dssp EEEETTSCEEEEETTCCEEE--EECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEEC--
T ss_pred EEEcCCCceeecccccceee--eccCCCCceeeeeeecCCccceecccccceeccccceeeeeeccCCCcceeeeeec--
Confidence 99999999999997643221 1222 33334444443
Q ss_pred ccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcce
Q psy2671 304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHW 382 (573)
Q Consensus 304 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~ 382 (573)
++++++++++.|+.|++||. .++....+.+|...|.+++|++++ .+++++.|+.|++|+. ++..+..+.+|...
T Consensus 190 ---~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~ 264 (577)
T 2ymu_A 190 ---PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS 264 (577)
T ss_dssp ---TTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSC
T ss_pred ---CCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCC
Confidence 35678999999999999995 567788899999999999999887 6999999999999996 46778889999999
Q ss_pred eeEEEeccCceeEEEEcCCCcee-eCCCCchhh--hhhh-hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc
Q psy2671 383 VNTLALSTDYLMRVEATSTGGFK-YDPANPEES--SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG 458 (573)
Q Consensus 383 v~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~-~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~ 458 (573)
|..++++++....+....++.+. |+....... ..+. .......+|++..+++++.|+++++||.... .+..+.+
T Consensus 265 v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~--~~~~~~~ 342 (577)
T 2ymu_A 265 VNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ--HLQTLTG 342 (577)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC--EEEEECC
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC--eeEEEeC
Confidence 99999999887666665555543 332211100 0011 1112345789999999999999999997643 3566788
Q ss_pred ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccc
Q psy2671 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ 538 (573)
Q Consensus 459 h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~ 538 (573)
|...|.+++|+|+|++|++|+.||.|++||. +++.+..+.+|...|.+++|+|||++|++++.|+.|++||. +++.+.
T Consensus 343 ~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~ 420 (577)
T 2ymu_A 343 HSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQ 420 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEE
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEE
Confidence 9999999999999999999999999999994 67888899999999999999999999999999999999996 566778
Q ss_pred cccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 539 DLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 539 ~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
.+.+|...|++++|+||+++|++++.|++|++|+
T Consensus 421 ~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~ 454 (577)
T 2ymu_A 421 TLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWN 454 (577)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 8899999999999999999999999999999996
No 5
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-51 Score=450.14 Aligned_cols=402 Identities=12% Similarity=0.151 Sum_probs=316.2
Q ss_pred CCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEe
Q psy2671 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ 186 (573)
Q Consensus 107 ~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (573)
.||.+.|++++|+|++++||+|+.||+|+|||..++.++.
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~---------------------------------------- 53 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVI---------------------------------------- 53 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEE----------------------------------------
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEE----------------------------------------
Confidence 3799999999999999999999999999999986543221
Q ss_pred ceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEE
Q psy2671 187 KQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVS 266 (573)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~s 266 (573)
...|...|.+++|+| |++|++++.|++|+|||+.+++.+..+. |...|++++|+|++++|++
T Consensus 54 ----------------~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~s 115 (902)
T 2oaj_A 54 ----------------KLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLI 115 (902)
T ss_dssp ----------------ECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEE
T ss_pred ----------------EcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEE
Confidence 113678999999999 8899999999999999999998887775 6678999999999999999
Q ss_pred EeeCCeEEEEECCCCceec----------ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec
Q psy2671 267 GCKNGVIHAWDSSTGKQIG----------QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT 336 (573)
Q Consensus 267 gs~dg~i~vwd~~~~~~~~----------~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 336 (573)
|+.||.|++||+++++... ....+|...|.+++|.|. +...+++++.||.| +||+..+++.+.+.
T Consensus 116 gs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~----~~~~l~~g~~dg~v-lWd~~~~~~~~~~~ 190 (902)
T 2oaj_A 116 GLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR----DIGTVLISYEYVTL-TYSLVENEIKQSFI 190 (902)
T ss_dssp EETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT----EEEEEEEECSSCEE-EEETTTTEEEEEEC
T ss_pred EcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC----CCCEEEEEeCCCcE-EEECCCCceEEEEe
Confidence 9999999999999876431 235789999999999883 23578999999999 99999999888877
Q ss_pred CC------------------CccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEe--c---cC-------------C
Q psy2671 337 SH------------------TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRT--L---EG-------------H 379 (573)
Q Consensus 337 ~h------------------~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~--~---~~-------------~ 379 (573)
.| ...|.+++|++++ .+++++.|++|++||+++++.+.. + .+ |
T Consensus 191 ~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~ 270 (902)
T 2oaj_A 191 YELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTN 270 (902)
T ss_dssp CCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSC
T ss_pred cccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccc
Confidence 65 5779999999987 799999999999999998876543 2 12 3
Q ss_pred cceeeEEEec----cCc-e-eEEEEcCCC----ce-e-------------------------------------------
Q psy2671 380 AHWVNTLALS----TDY-L-MRVEATSTG----GF-K------------------------------------------- 405 (573)
Q Consensus 380 ~~~v~~~~~s----~~~-~-~~~~~~~~~----~~-~------------------------------------------- 405 (573)
...|..++++ ++. . +........ .+ .
T Consensus 271 ~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 350 (902)
T 2oaj_A 271 AAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILP 350 (902)
T ss_dssp CCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEE
T ss_pred cCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEE
Confidence 4468888884 321 1 111111100 00 0
Q ss_pred ----------------------------eCCCCchhhhh----h-hhh--------------------------------
Q psy2671 406 ----------------------------YDPANPEESSK----H-ALA-------------------------------- 420 (573)
Q Consensus 406 ----------------------------~~~~~~~~~~~----~-~~~-------------------------------- 420 (573)
|+......... + .+.
T Consensus 351 ~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~ 430 (902)
T 2oaj_A 351 IPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYL 430 (902)
T ss_dssp CCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCS
T ss_pred CCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCc
Confidence 00000000000 0 000
Q ss_pred --------heeeeCCCCcEEEEEeCCCeEEEEcCCCCccc----ee-eec-----cccccEEEEEECCCCCEEEEeeCCC
Q psy2671 421 --------KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS----LA-RMT-----GHQQLINCVEFSPDGRIIASASFDK 482 (573)
Q Consensus 421 --------~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~----~~-~~~-----~h~~~v~~v~~sp~g~~las~s~dg 482 (573)
...+++|++.+|++|+.|++|++||+.++... +. .+. +|...|.+|+|+|||++||+|+.||
T Consensus 431 l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dg 510 (902)
T 2oaj_A 431 LKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETG 510 (902)
T ss_dssp CCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTS
T ss_pred ccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCc
Confidence 00112477889999999999999998765321 11 111 7889999999999999999999999
Q ss_pred cEEEEeCCCC---------------------------------------------eEEEeecCCcceEEEEEECCCCCEE
Q psy2671 483 SIKLWDGRIG---------------------------------------------KFITTLRGHVQAVYMVAWSSDSRLL 517 (573)
Q Consensus 483 ~i~lwd~~~~---------------------------------------------~~~~~~~~h~~~v~~v~~s~dg~~l 517 (573)
+|+|||..++ +++..+.+|...|++++||||| +|
T Consensus 511 tV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~l 589 (902)
T 2oaj_A 511 DVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FV 589 (902)
T ss_dssp CEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EE
T ss_pred EEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EE
Confidence 9999998765 2467788999999999999999 99
Q ss_pred EEEeCCCcEEEEeCCccccc-----cccc-CcCCCEEEEEEc-----cCC---CEEEEeeCCCcEEEcc
Q psy2671 518 VSGSADSTLKVWNMKTKKIE-----QDLP-GHGDEVYAVDWA-----PDG---EKVASGGKDKVLRLWQ 572 (573)
Q Consensus 518 as~s~D~~v~vwd~~~~~~~-----~~l~-~h~~~v~~~~~s-----~d~---~~l~s~~~d~~i~iw~ 572 (573)
|+|+.|++|+|||+++...+ ..+. +|.+.|++++|+ ||| ++|++|+.|++|++|+
T Consensus 590 Asgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd 658 (902)
T 2oaj_A 590 GIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYK 658 (902)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEE
T ss_pred EEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEE
Confidence 99999999999999887654 3454 999999999999 885 8999999999999997
No 6
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.5e-50 Score=427.33 Aligned_cols=445 Identities=20% Similarity=0.308 Sum_probs=346.2
Q ss_pred ccccCCCcccc-EEEEEEcC--CCCeeEEeeCCCcEEEeeccCC--------cceeeecCCCe-eeeecccccccccccc
Q psy2671 102 CTSSMPGHAEA-VISVKFSP--NGRSLASGSGDTTVRFWDVTTQ--------TPLFKCEGTPY-LFYVNETEITKTLADV 169 (573)
Q Consensus 102 ~~~~~~gH~~~-V~~l~~s~--~~~~lat~s~D~~vrvWd~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 169 (573)
....+.+|.+. |.+++|+| ++++||+|+.||+|+|||+.++ ..+.....+.. +...
T Consensus 55 ~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~------------ 122 (615)
T 1pgu_A 55 PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI------------ 122 (615)
T ss_dssp SEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEE------------
T ss_pred cceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEE------------
Confidence 44567899999 99999999 9999999999999999999755 22222221110 0000
Q ss_pred cCCCCCCccceEEEEEece---eeEEEeeccccccCCCCCCCcEEEEEEcCCCC-eEEEEeCCCeEEEEECCCCeeeEEe
Q psy2671 170 LPLDTLNTEEVVDIVYQKQ---AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR-SLASGSGDTTVRFWDVTTQTPLFKC 245 (573)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~-~las~s~d~~i~iwd~~~~~~~~~~ 245 (573)
...+.+..+....... ....+....++...+.+|...|.+++|+|+++ .+++++.|+.|++||+.+++.+..+
T Consensus 123 ---~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~ 199 (615)
T 1pgu_A 123 ---SWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD 199 (615)
T ss_dssp ---EECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEE
T ss_pred ---EEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeee
Confidence 0001111111111110 11112223334456789999999999999998 7999999999999999999999999
Q ss_pred cCCCC---cEEEEEEcCC-CCeEEEEeeCCeEEEEECCCCceeccccc---CCcccEEEEEecccccCCCCCEEEEEeCC
Q psy2671 246 EGHKH---WVLCIAWSPD-SKQLVSGCKNGVIHAWDSSTGKQIGQPMR---GHKQWITALSWEPFHLNHQCRRFASSGKD 318 (573)
Q Consensus 246 ~~h~~---~V~~v~~s~d-g~~l~sgs~dg~i~vwd~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~~~~l~s~~~d 318 (573)
.+|.. .|.+++|+|+ +++|++++.||.|++||+.+++.+..... +|...|.++.|. +++++++++.|
T Consensus 200 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~l~~~~~d 273 (615)
T 1pgu_A 200 RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL------DSQKFATVGAD 273 (615)
T ss_dssp CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES------SSSEEEEEETT
T ss_pred cccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc------CCCEEEEEcCC
Confidence 99999 9999999999 99999999999999999999887654435 899999999985 45789999999
Q ss_pred CcEEEEECCCCeEEEEecCC----CccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCcee
Q psy2671 319 GAIRIWDVILSQCVRVLTSH----TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLM 394 (573)
Q Consensus 319 g~v~iwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 394 (573)
|.|++||+.+++.+..+..+ ...+.++.|+....+++++.|+.|++|++.++.....+.+|...|..+++ ++ +
T Consensus 274 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~--l 350 (615)
T 1pgu_A 274 ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP--L 350 (615)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT--T
T ss_pred CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC--c
Confidence 99999999999988888776 46788888876678999999999999999999888899999888888888 55 2
Q ss_pred EEEEcCCCcee-eCCC------------------------------------Cchh-------------------h----
Q psy2671 395 RVEATSTGGFK-YDPA------------------------------------NPEE-------------------S---- 414 (573)
Q Consensus 395 ~~~~~~~~~~~-~~~~------------------------------------~~~~-------------------~---- 414 (573)
.... .++.+. |+.. .... .
T Consensus 351 ~~~~-~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 429 (615)
T 1pgu_A 351 ISGS-YDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDL 429 (615)
T ss_dssp EEEE-TTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEE
T ss_pred EEEC-CCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCce
Confidence 1111 111111 1100 0000 0
Q ss_pred ------hhhhh------hheeeeCCCCcEEEEEeC-CCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC
Q psy2671 415 ------SKHAL------AKYQAQCPEGEKLVSGSD-DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481 (573)
Q Consensus 415 ------~~~~~------~~~~~~~~~~~~l~sg~~-dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d 481 (573)
..... .........+.++++++. |+.+++||+.+.......+.+|...|.+++|+|+|++|++++.|
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 509 (615)
T 1pgu_A 430 LILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVM 509 (615)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCC
Confidence 00000 000000011778899999 99999999876533225667899999999999999999999999
Q ss_pred CcEEEEeCCCCeEEEeecC-CcceEEEEEECC----------CCCEEEEEeCCCcEEEEeCCcc-cccccccCcCCCEEE
Q psy2671 482 KSIKLWDGRIGKFITTLRG-HVQAVYMVAWSS----------DSRLLVSGSADSTLKVWNMKTK-KIEQDLPGHGDEVYA 549 (573)
Q Consensus 482 g~i~lwd~~~~~~~~~~~~-h~~~v~~v~~s~----------dg~~las~s~D~~v~vwd~~~~-~~~~~l~~h~~~v~~ 549 (573)
|.|++||..+++.+..+.+ |...|++++|+| ++++||+++.|+.|++||+.++ +.+..+.+|.+.|++
T Consensus 510 g~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~ 589 (615)
T 1pgu_A 510 GKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNN 589 (615)
T ss_dssp SCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEE
T ss_pred CeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEE
Confidence 9999999999999999988 999999999999 9999999999999999999987 778889999999999
Q ss_pred EEEccCCCEEEEeeCCCcEEEcc
Q psy2671 550 VDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 550 ~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
++|+|+++ |++++.|++|++|+
T Consensus 590 l~~s~~~~-l~s~~~d~~v~iw~ 611 (615)
T 1pgu_A 590 LLWETPST-LVSSGADACIKRWN 611 (615)
T ss_dssp EEEEETTE-EEEEETTSCEEEEE
T ss_pred EEEcCCCC-eEEecCCceEEEEe
Confidence 99999999 99999999999997
No 7
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.5e-50 Score=460.03 Aligned_cols=406 Identities=23% Similarity=0.410 Sum_probs=343.0
Q ss_pred cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV 184 (573)
Q Consensus 105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (573)
.+.+|.+.|++++|+|+|++||||+.||+|+|||+.+++++.
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~-------------------------------------- 651 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLL-------------------------------------- 651 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE--------------------------------------
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEE--------------------------------------
Confidence 567999999999999999999999999999999998875432
Q ss_pred EeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcC--CCC
Q psy2671 185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP--DSK 262 (573)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~--dg~ 262 (573)
.+.+|.+.|.+++|+|+|++||+|+.|++|++||+.+++.+..+.+|...|.+++|+| ++.
T Consensus 652 -----------------~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 714 (1249)
T 3sfz_A 652 -----------------DIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHL 714 (1249)
T ss_dssp -----------------EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCC
T ss_pred -----------------EeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCce
Confidence 2458999999999999999999999999999999999999999999999999999999 455
Q ss_pred eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-------
Q psy2671 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL------- 335 (573)
Q Consensus 263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~------- 335 (573)
.+++|+.|+.|++||+.+++.. ..+.+|...|.+++|.| +++.+++++.||+|++||+..++....+
T Consensus 715 ~l~sg~~d~~v~vwd~~~~~~~-~~~~~h~~~v~~~~~sp-----~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~ 788 (1249)
T 3sfz_A 715 LLATGSNDFFLKLWDLNQKECR-NTMFGHTNSVNHCRFSP-----DDELLASCSADGTLRLWDVRSANERKSINVKRFFL 788 (1249)
T ss_dssp EEEEEETTSCEEEEETTSSSEE-EEECCCSSCEEEEEECS-----STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC-
T ss_pred EEEEEeCCCeEEEEECCCcchh-heecCCCCCEEEEEEec-----CCCEEEEEECCCeEEEEeCCCCcccceeccccccc
Confidence 8999999999999999998765 45678999999999977 5679999999999999998766443322
Q ss_pred ------------------------------------------------cCCCccEEEEEECCCc-EEEEEeCCCeEEEEe
Q psy2671 336 ------------------------------------------------TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWR 366 (573)
Q Consensus 336 ------------------------------------------------~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~ 366 (573)
.+|...|.+++|++++ .+++++.|+.|++|+
T Consensus 789 ~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd 868 (1249)
T 3sfz_A 789 SSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWN 868 (1249)
T ss_dssp -------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEE
T ss_pred ccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 2677788999998876 789999999999999
Q ss_pred CCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCcee-eCCCCchhh-------------------------------
Q psy2671 367 ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEES------------------------------- 414 (573)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~------------------------------- 414 (573)
+.++.....+.+|...|..++++++....+....++.+. |+.......
T Consensus 869 ~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 948 (1249)
T 3sfz_A 869 IDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQL 948 (1249)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEE
T ss_pred cCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEE
Confidence 999999999999999999999999886666665555443 321100000
Q ss_pred ----------hhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcE
Q psy2671 415 ----------SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI 484 (573)
Q Consensus 415 ----------~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i 484 (573)
...........+|++.++++|+.+|.|++|++.+.. ....+.+|...|.+++|+|+|++|++++.||.|
T Consensus 949 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~-~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i 1027 (1249)
T 3sfz_A 949 IAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNR-VFSSGVGHKKAVRHIQFTADGKTLISSSEDSVI 1027 (1249)
T ss_dssp EEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTS-CEEECCCCSSCCCCEEECSSSSCEEEECSSSBE
T ss_pred EecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCc-eeeecccCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 000001122457899999999999999999987654 456677899999999999999999999988888
Q ss_pred EEEeCCCCe----------------------------------------EEEeecCCcceEEEEEECCCCCEEEEEeCCC
Q psy2671 485 KLWDGRIGK----------------------------------------FITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524 (573)
Q Consensus 485 ~lwd~~~~~----------------------------------------~~~~~~~h~~~v~~v~~s~dg~~las~s~D~ 524 (573)
++||..+++ .+..+.+|...|++++|+||+++|++++.|+
T Consensus 1028 ~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~ 1107 (1249)
T 3sfz_A 1028 QVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADK 1107 (1249)
T ss_dssp EEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSS
T ss_pred EEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCC
Confidence 888866543 3344556788889999999999999999999
Q ss_pred cEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 525 TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 525 ~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
+|++||+.+++....+.+|.+.|++++|+||+++|++++.||.|++|+
T Consensus 1108 ~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd 1155 (1249)
T 3sfz_A 1108 TAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWN 1155 (1249)
T ss_dssp CCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEE
T ss_pred cEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 999999999999999999999999999999999999999999999997
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.7e-49 Score=397.85 Aligned_cols=308 Identities=29% Similarity=0.533 Sum_probs=269.3
Q ss_pred cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD 182 (573)
Q Consensus 103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (573)
...+.||.++|++++|+|++++||||+.|++|+|||+.++.+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~------------------------------------- 143 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE------------------------------------- 143 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC-------------------------------------
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE-------------------------------------
Confidence 4567899999999999999999999999999999999877543
Q ss_pred EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671 183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262 (573)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~ 262 (573)
..+.+|.+.|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|+++
T Consensus 144 ------------------~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~ 205 (410)
T 1vyh_C 144 ------------------RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGD 205 (410)
T ss_dssp ------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSS
T ss_pred ------------------EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCC
Confidence 23568999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE
Q psy2671 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV 342 (573)
Q Consensus 263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v 342 (573)
+|++|+.|++|++||+.++..+ ..+.+|..+|..+.+.| ++..+++++.|++|++||+.++++...+.+|...|
T Consensus 206 ~l~s~s~D~~i~~wd~~~~~~~-~~~~~h~~~v~~~~~~~-----~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v 279 (410)
T 1vyh_C 206 HIVSASRDKTIKMWEVQTGYCV-KTFTGHREWVRMVRPNQ-----DGTLIASCSNDQTVRVWVVATKECKAELREHRHVV 279 (410)
T ss_dssp EEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred EEEEEeCCCeEEEEECCCCcEE-EEEeCCCccEEEEEECC-----CCCEEEEEcCCCeEEEEECCCCceeeEecCCCceE
Confidence 9999999999999999998765 45678999999998765 67899999999999999999998888888999989
Q ss_pred EEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671 343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY 422 (573)
Q Consensus 343 ~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (573)
.+++|++++.... ..
T Consensus 280 ~~~~~~~~~~~~~--------------------~~--------------------------------------------- 294 (410)
T 1vyh_C 280 ECISWAPESSYSS--------------------IS--------------------------------------------- 294 (410)
T ss_dssp EEEEECCSCGGGG--------------------GG---------------------------------------------
T ss_pred EEEEEcCcccccc--------------------hh---------------------------------------------
Confidence 8888876431000 00
Q ss_pred eeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc
Q psy2671 423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV 502 (573)
Q Consensus 423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~ 502 (573)
...+ .......++|.+|++|+.|++|++||.++++.+..+.+|.
T Consensus 295 ---~~~~---------------------------------~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 338 (410)
T 1vyh_C 295 ---EATG---------------------------------SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338 (410)
T ss_dssp ---GCCS---------------------------------CC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred ---hhcc---------------------------------ccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC
Confidence 0000 0001122457899999999999999999999999999999
Q ss_pred ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 503 ~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
..|.+++|+|+|++|++|+.|++|++||+.+++++..+.+|.+.|++++|+|++++|++||.|++|++|+
T Consensus 339 ~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.8e-48 Score=376.83 Aligned_cols=290 Identities=29% Similarity=0.488 Sum_probs=239.2
Q ss_pred ccCCCccccEEEEEEcCC----CCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccc
Q psy2671 104 SSMPGHAEAVISVKFSPN----GRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEE 179 (573)
Q Consensus 104 ~~~~gH~~~V~~l~~s~~----~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (573)
..+.+|.++|++++|+|+ +++|||||.|++|||||+.+++...
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~--------------------------------- 72 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDL--------------------------------- 72 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEE---------------------------------
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeee---------------------------------
Confidence 346789999999999985 5699999999999999987653210
Q ss_pred eEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcC
Q psy2671 180 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP 259 (573)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~ 259 (573)
...+.||...|.+++|+|++..+++++.|++|++||+.+++.+..+..|...+.+++|+|
T Consensus 73 --------------------~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~sp 132 (321)
T 3ow8_A 73 --------------------QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP 132 (321)
T ss_dssp --------------------EEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECT
T ss_pred --------------------eeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECC
Confidence 123568999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC
Q psy2671 260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT 339 (573)
Q Consensus 260 dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~ 339 (573)
++++|++|+.||.|++|++++++... .+..|...|.+++|.| ++++|++++.||.|++||
T Consensus 133 dg~~l~~g~~dg~v~i~~~~~~~~~~-~~~~~~~~v~~~~~sp-----dg~~lasg~~dg~i~iwd-------------- 192 (321)
T 3ow8_A 133 DSQYLATGTHVGKVNIFGVESGKKEY-SLDTRGKFILSIAYSP-----DGKYLASGAIDGIINIFD-------------- 192 (321)
T ss_dssp TSSEEEEECTTSEEEEEETTTCSEEE-EEECSSSCEEEEEECT-----TSSEEEEEETTSCEEEEE--------------
T ss_pred CCCEEEEEcCCCcEEEEEcCCCceeE-EecCCCceEEEEEECC-----CCCEEEEEcCCCeEEEEE--------------
Confidence 99999999999999999998876542 2334444444444433 233333333333333333
Q ss_pred ccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671 340 RSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL 419 (573)
Q Consensus 340 ~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (573)
++++..
T Consensus 193 ---------------------------~~~~~~----------------------------------------------- 198 (321)
T 3ow8_A 193 ---------------------------IATGKL----------------------------------------------- 198 (321)
T ss_dssp ---------------------------TTTTEE-----------------------------------------------
T ss_pred ---------------------------CCCCcE-----------------------------------------------
Confidence 332211
Q ss_pred hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671 420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR 499 (573)
Q Consensus 420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~ 499 (573)
+..+.+|...|.+++|+|++++|++|+.||+|++||.++++.+..+.
T Consensus 199 ---------------------------------~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 245 (321)
T 3ow8_A 199 ---------------------------------LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS 245 (321)
T ss_dssp ---------------------------------EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred ---------------------------------EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc
Confidence 22334566778899999999999999999999999999999999999
Q ss_pred CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEccC
Q psy2671 500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573 (573)
Q Consensus 500 ~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~~ 573 (573)
+|...|.+++|+|++++|++++.|++|++||+.+++++..+.+|.+.|++++|+|++++|++++.|++|++|+.
T Consensus 246 ~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 246 GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999973
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.3e-48 Score=374.75 Aligned_cols=286 Identities=25% Similarity=0.432 Sum_probs=235.7
Q ss_pred ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183 (573)
Q Consensus 104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (573)
.+|.+|.+.|.+++|+|++++||||+.||+|+|||+.++.++.
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~------------------------------------- 49 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVR------------------------------------- 49 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-------------------------------------
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeE-------------------------------------
Confidence 3567899999999999999999999999999999998775432
Q ss_pred EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe
Q psy2671 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ 263 (573)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~ 263 (573)
.+.+|..+|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++
T Consensus 50 ------------------~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 111 (304)
T 2ynn_A 50 ------------------SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY 111 (304)
T ss_dssp ------------------EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred ------------------EeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCE
Confidence 23468899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEE
Q psy2671 264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT 343 (573)
Q Consensus 264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~ 343 (573)
|++|+.|++|++||++++...... +.+|...|.
T Consensus 112 l~sgs~D~~v~lWd~~~~~~~~~~-----------------------------------------------~~~h~~~v~ 144 (304)
T 2ynn_A 112 VLSGSDDLTVKLWNWENNWALEQT-----------------------------------------------FEGHEHFVM 144 (304)
T ss_dssp EEEEETTSCEEEEEGGGTTEEEEE-----------------------------------------------ECCCCSCEE
T ss_pred EEEECCCCeEEEEECCCCcchhhh-----------------------------------------------hcccCCcEE
Confidence 999999999999998655333222 334555555
Q ss_pred EEEECCC--cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671 344 CIRWGGS--GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421 (573)
Q Consensus 344 ~~~~~~~--~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (573)
+++|++. ..+++|+.|++|++||++++.
T Consensus 145 ~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~-------------------------------------------------- 174 (304)
T 2ynn_A 145 CVAFNPKDPSTFASGCLDRTVKVWSLGQST-------------------------------------------------- 174 (304)
T ss_dssp EEEECTTCTTEEEEEETTSEEEEEETTCSS--------------------------------------------------
T ss_pred EEEECCCCCCEEEEEeCCCeEEEEECCCCC--------------------------------------------------
Confidence 5555542 245555555555555543221
Q ss_pred eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC--CCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP--DGRIIASASFDKSIKLWDGRIGKFITTLR 499 (573)
Q Consensus 422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp--~g~~las~s~dg~i~lwd~~~~~~~~~~~ 499 (573)
.......+|...+..+.|+| ++++|++|+.|++|++||.++++++.++.
T Consensus 175 -----------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~ 225 (304)
T 2ynn_A 175 -----------------------------PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE 225 (304)
T ss_dssp -----------------------------CSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred -----------------------------ccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC
Confidence 11111223445678888876 78899999999999999999999999999
Q ss_pred CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCC--EEEEeeCCCcEEEc
Q psy2671 500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGE--KVASGGKDKVLRLW 571 (573)
Q Consensus 500 ~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~--~l~s~~~d~~i~iw 571 (573)
+|...|.+++|+|++++|++|+.|++|++||+.++++++.+..|.+.+++++|+|+++ +|++|+.||.+ +|
T Consensus 226 ~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~-~~ 298 (304)
T 2ynn_A 226 GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFT-VL 298 (304)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEE-EE
T ss_pred CCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceE-EE
Confidence 9999999999999999999999999999999999999999999999999999999875 58888777654 44
No 11
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.7e-47 Score=404.90 Aligned_cols=397 Identities=17% Similarity=0.279 Sum_probs=318.2
Q ss_pred CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCC----cceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ----TPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183 (573)
Q Consensus 108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (573)
.|.+.|.+++|+|+|++||+++ |+.|+|||+.++ ++.
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~-------------------------------------- 56 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPV-------------------------------------- 56 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSE--------------------------------------
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccc--------------------------------------
Confidence 5899999999999999999998 889999999876 322
Q ss_pred EEeceeeEEEeeccccccCCCCCCCc-EEEEEEcC--CCCeEEEEeCCCeEEEEECCCC--------eeeEEecCCCCcE
Q psy2671 184 VYQKQAVFQVRPVTRCTSSMPGHAEA-VISVKFSP--NGRSLASGSGDTTVRFWDVTTQ--------TPLFKCEGHKHWV 252 (573)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gh~~~-V~~~~fsp--~g~~las~s~d~~i~iwd~~~~--------~~~~~~~~h~~~V 252 (573)
..+.+|.+. |.+++|+| ++++||+|+.|++|++||+.++ ..+..+.+|...|
T Consensus 57 -----------------~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v 119 (615)
T 1pgu_A 57 -----------------VQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPI 119 (615)
T ss_dssp -----------------EEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCE
T ss_pred -----------------eEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccE
Confidence 235689999 99999999 9999999999999999999754 5667788999999
Q ss_pred EEEEEcCCCCeEEEEeeC----CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCC-EEEEEeCCCcEEEEECC
Q psy2671 253 LCIAWSPDSKQLVSGCKN----GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCR-RFASSGKDGAIRIWDVI 327 (573)
Q Consensus 253 ~~v~~s~dg~~l~sgs~d----g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~ 327 (573)
.+++|+|++++|++++.+ +.|++|| .++.+ ..+.+|...|.++.|.| +++ .+++++.|+.|++||+.
T Consensus 120 ~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~-~~~~~~~~~v~~~~~~~-----~~~~~l~~~~~d~~v~vwd~~ 191 (615)
T 1pgu_A 120 SDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSL-GEVSGHSQRINACHLKQ-----SRPMRSMTVGDDGSVVFYQGP 191 (615)
T ss_dssp EEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEE-EECCSCSSCEEEEEECS-----SSSCEEEEEETTTEEEEEETT
T ss_pred EEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcc-eeeecCCccEEEEEECC-----CCCcEEEEEeCCCcEEEEeCC
Confidence 999999999999999988 7899998 34443 45678999999999987 344 79999999999999999
Q ss_pred CCeEEEEecCCCc---cEEEEEECCC-c-EEEEEeCCCeEEEEeCCCCeeeEec-c---CCcceeeEEEeccCceeEEEE
Q psy2671 328 LSQCVRVLTSHTR---SVTCIRWGGS-G-LIYSASQDRTIKVWRASDGVMCRTL-E---GHAHWVNTLALSTDYLMRVEA 398 (573)
Q Consensus 328 ~~~~~~~~~~h~~---~v~~~~~~~~-~-~l~s~s~d~~i~vw~~~~~~~~~~~-~---~~~~~v~~~~~s~~~~~~~~~ 398 (573)
.++....+.+|.. .|.+++|+++ + .+++++.|+.|++||+.++.....+ . +|...|..++++ +....+..
T Consensus 192 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~ 270 (615)
T 1pgu_A 192 PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATV 270 (615)
T ss_dssp TBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEE
T ss_pred CcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEE
Confidence 9999999999999 9999999988 6 7999999999999999999998888 6 899999999999 76655555
Q ss_pred cCCCcee-eCCCCchhhhh---h----hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEE------
Q psy2671 399 TSTGGFK-YDPANPEESSK---H----ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN------ 464 (573)
Q Consensus 399 ~~~~~~~-~~~~~~~~~~~---~----~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~------ 464 (573)
..++.+. |+......... . .........+++.++++++.|+.+++||+.+.. .+..+.+|...|.
T Consensus 271 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~~ 349 (615)
T 1pgu_A 271 GADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDE-VLKTISGHNKGITALTVNP 349 (615)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEE-EEEEECCCSSCEEEEETTT
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCc-EEEEEeCCCCCEEEEEecC
Confidence 5555433 44332111000 0 001111112367788888888888888876422 2223333333222
Q ss_pred --------------------------------------------------------------------------------
Q psy2671 465 -------------------------------------------------------------------------------- 464 (573)
Q Consensus 465 -------------------------------------------------------------------------------- 464 (573)
T Consensus 350 l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 429 (615)
T 1pgu_A 350 LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDL 429 (615)
T ss_dssp TEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEE
T ss_pred cEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCce
Confidence
Q ss_pred ---------------------EEEECCCCCEEEEeeC-CCcEEEEeCCCCeEE-EeecCCcceEEEEEECCCCCEEEEEe
Q psy2671 465 ---------------------CVEFSPDGRIIASASF-DKSIKLWDGRIGKFI-TTLRGHVQAVYMVAWSSDSRLLVSGS 521 (573)
Q Consensus 465 ---------------------~v~~sp~g~~las~s~-dg~i~lwd~~~~~~~-~~~~~h~~~v~~v~~s~dg~~las~s 521 (573)
+++|+ +++|++++. ||.|++||..+++.. ..+.+|...|.+++|+|++++|++++
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 507 (615)
T 1pgu_A 430 LILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGD 507 (615)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcC
Confidence 22232 455666666 777777777666554 66778999999999999999999999
Q ss_pred CCCcEEEEeCCcccccccccC-cCCCEEEEEEcc----------CCCEEEEeeCCCcEEEcc
Q psy2671 522 ADSTLKVWNMKTKKIEQDLPG-HGDEVYAVDWAP----------DGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 522 ~D~~v~vwd~~~~~~~~~l~~-h~~~v~~~~~s~----------d~~~l~s~~~d~~i~iw~ 572 (573)
.|+.|++||+.+++.+..+.+ |...|++++|+| ++++|++++.|+.|++|+
T Consensus 508 ~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~ 569 (615)
T 1pgu_A 508 VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYS 569 (615)
T ss_dssp TTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEE
T ss_pred CCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEE
Confidence 999999999999999988888 999999999999 999999999999999997
No 12
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.9e-48 Score=443.77 Aligned_cols=408 Identities=24% Similarity=0.359 Sum_probs=327.5
Q ss_pred cccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccce
Q psy2671 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEV 180 (573)
Q Consensus 101 ~~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (573)
.+...+.+|.++|.+++|+|++++||||+.|++|+|||+.+++++.
T Consensus 648 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~---------------------------------- 693 (1249)
T 3sfz_A 648 EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH---------------------------------- 693 (1249)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE----------------------------------
T ss_pred CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE----------------------------------
Confidence 3455778999999999999999999999999999999998876542
Q ss_pred EEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcC--CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEc
Q psy2671 181 VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP--NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258 (573)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp--~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s 258 (573)
.+.+|...|.+++|+| ++..+++|+.|++|++||+.++..+..+.+|...|.+++|+
T Consensus 694 ---------------------~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~s 752 (1249)
T 3sfz_A 694 ---------------------TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFS 752 (1249)
T ss_dssp ---------------------EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEEC
T ss_pred ---------------------EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEe
Confidence 2347999999999999 45689999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeeCCeEEEEECCCCceecc----------------------------------------------------
Q psy2671 259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQ---------------------------------------------------- 286 (573)
Q Consensus 259 ~dg~~l~sgs~dg~i~vwd~~~~~~~~~---------------------------------------------------- 286 (573)
|++++|++++.||.|++||+.++.....
T Consensus 753 p~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~ 832 (1249)
T 3sfz_A 753 PDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLL 832 (1249)
T ss_dssp SSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEE
T ss_pred cCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCce
Confidence 9999999999999999999876643211
Q ss_pred --cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEE
Q psy2671 287 --PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIK 363 (573)
Q Consensus 287 --~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~ 363 (573)
...+|...|.++.|.| +++.+++++.||.|++||+.++.....+.+|...|.+++|++++ .+++++.|++|+
T Consensus 833 ~~~~~~~~~~v~~~~~sp-----~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~ 907 (1249)
T 3sfz_A 833 AEIHTGHHSTIQYCDFSP-----YDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIR 907 (1249)
T ss_dssp EEEECSSSSCCCEEEECS-----STTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eEEcCCCCCceEEEEEcC-----CCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEE
Confidence 0114556666777655 67899999999999999999999999999999999999999887 789999999999
Q ss_pred EEeCCC--------------------------------------------------------------------------
Q psy2671 364 VWRASD-------------------------------------------------------------------------- 369 (573)
Q Consensus 364 vw~~~~-------------------------------------------------------------------------- 369 (573)
+|+..+
T Consensus 908 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i 987 (1249)
T 3sfz_A 908 VWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKI 987 (1249)
T ss_dssp EEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEE
T ss_pred EEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEE
Confidence 998532
Q ss_pred -----CeeeEeccCCcceeeEEEeccCceeEEEEcCCCcee-eCCCCchhhh--hhh-hhheeeeCCCCcEEEEEeCCCe
Q psy2671 370 -----GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESS--KHA-LAKYQAQCPEGEKLVSGSDDFT 440 (573)
Q Consensus 370 -----~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~-~~~~~~~~~~~~~l~sg~~dg~ 440 (573)
+.....+.+|...|..++++++....+....++.+. |+........ .+. .......+| +..+++++.|++
T Consensus 988 ~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~-~~~l~~~~~dg~ 1066 (1249)
T 3sfz_A 988 IELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQ-DSRLLSWSFDGT 1066 (1249)
T ss_dssp EETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECS-SSEEEEEESSSE
T ss_pred EEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcC-CCcEEEEECCCc
Confidence 122233445556666666666655444444444332 2222111000 000 001112234 446788888888
Q ss_pred EEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEE
Q psy2671 441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSG 520 (573)
Q Consensus 441 i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~ 520 (573)
+++||+.++. ....+.+|...|.+++|+|+++++++++.||+|++||..+++.+..+.+|...|++++|+|||++||++
T Consensus 1067 v~vwd~~~~~-~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~ 1145 (1249)
T 3sfz_A 1067 VKVWNVITGR-IERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATG 1145 (1249)
T ss_dssp EEEEETTTTC-CCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEE
T ss_pred EEEEECCCCc-eeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEE
Confidence 8888887654 456678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEEEeCCcccccccc---------cCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 521 SADSTLKVWNMKTKKIEQDL---------PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 521 s~D~~v~vwd~~~~~~~~~l---------~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
+.||.|++||+.+++.+..+ .+|.+.|++++|+||+++|++++ |.|++|+
T Consensus 1146 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vwd 1204 (1249)
T 3sfz_A 1146 DDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWWN 1204 (1249)
T ss_dssp ETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES--SSEEEBC
T ss_pred eCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC--CeEEEEE
Confidence 99999999999998877665 67999999999999999999886 8999997
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=8.3e-47 Score=371.08 Aligned_cols=290 Identities=27% Similarity=0.460 Sum_probs=261.7
Q ss_pred cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280 (573)
Q Consensus 201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~ 280 (573)
.++.||.+.|.+++|+|++++|++|+.|++|++||+.++..+..+..|...|.+++|+|++++|++|+.|+.|++|++.+
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~ 128 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECcc
Confidence 45779999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCC
Q psy2671 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR 360 (573)
Q Consensus 281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~ 360 (573)
+... ......+.+|...|.++.|.+++.+++++.|+
T Consensus 129 ~~~~--------------------------------------------~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~ 164 (340)
T 1got_B 129 REGN--------------------------------------------VRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT 164 (340)
T ss_dssp CSBS--------------------------------------------CEEEEEEECCSSCEEEEEEEETTEEEEEETTS
T ss_pred CCCc--------------------------------------------ceeEEEecCCCccEEEEEECCCCcEEEEECCC
Confidence 4210 01123456788899999999888999999999
Q ss_pred eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCe
Q psy2671 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT 440 (573)
Q Consensus 361 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 440 (573)
+|++||+.++.....+.+|...|.+++++ |++.++++|+.|++
T Consensus 165 ~i~~wd~~~~~~~~~~~~h~~~v~~~~~~-------------------------------------~~~~~l~sg~~d~~ 207 (340)
T 1got_B 165 TCALWDIETGQQTTTFTGHTGDVMSLSLA-------------------------------------PDTRLFVSGACDAS 207 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEC-------------------------------------TTSSEEEEEETTSC
T ss_pred cEEEEECCCCcEEEEEcCCCCceEEEEEC-------------------------------------CCCCEEEEEeCCCc
Confidence 99999999999999999999999888876 45789999999999
Q ss_pred EEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec--CCcceEEEEEECCCCCEEE
Q psy2671 441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR--GHVQAVYMVAWSSDSRLLV 518 (573)
Q Consensus 441 i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~--~h~~~v~~v~~s~dg~~la 518 (573)
|++||+++.. ....+.+|...|++++|+|++++|++|+.||+|++||.++++.+..+. .+...|.+++|+|+|++|+
T Consensus 208 v~~wd~~~~~-~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 286 (340)
T 1got_B 208 AKLWDVREGM-CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLL 286 (340)
T ss_dssp EEEEETTTCS-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEE
T ss_pred EEEEECCCCe-eEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEE
Confidence 9999998653 456788999999999999999999999999999999999998777664 3345799999999999999
Q ss_pred EEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 519 SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 519 s~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
+|+.|+.|++||+.+++.+..+.+|.+.|.+++|+|++++|+|||.|++|++|+
T Consensus 287 ~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 287 AGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999999999999999999999999999999999999996
No 14
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.3e-46 Score=369.58 Aligned_cols=289 Identities=25% Similarity=0.430 Sum_probs=252.4
Q ss_pred ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV 181 (573)
Q Consensus 102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (573)
+...|.||.++|++++|+|++++||||+.|++|+|||+.+++++.
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~----------------------------------- 91 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVH----------------------------------- 91 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE-----------------------------------
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcce-----------------------------------
Confidence 345678999999999999999999999999999999998765432
Q ss_pred EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC----eeeEEecCCCCcEEEEEE
Q psy2671 182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ----TPLFKCEGHKHWVLCIAW 257 (573)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~----~~~~~~~~h~~~V~~v~~ 257 (573)
.+.+|...|.+++|+|++++|++|+.|+.|++|++.++ .....+.+|...|.+++|
T Consensus 92 --------------------~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 151 (340)
T 1got_B 92 --------------------AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF 151 (340)
T ss_dssp --------------------EEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEE
T ss_pred --------------------EeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEE
Confidence 23468889999999999999999999999999999875 345567899999999999
Q ss_pred cCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC
Q psy2671 258 SPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS 337 (573)
Q Consensus 258 s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 337 (573)
++++. +++++.|++|++||+++++.+ ..+.+|...|.+++|.| +++++++++.|++|++||+..+.+...+.+
T Consensus 152 ~~~~~-l~s~s~d~~i~~wd~~~~~~~-~~~~~h~~~v~~~~~~~-----~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~ 224 (340)
T 1got_B 152 LDDNQ-IVTSSGDTTCALWDIETGQQT-TTFTGHTGDVMSLSLAP-----DTRLFVSGACDASAKLWDVREGMCRQTFTG 224 (340)
T ss_dssp EETTE-EEEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred CCCCc-EEEEECCCcEEEEECCCCcEE-EEEcCCCCceEEEEECC-----CCCEEEEEeCCCcEEEEECCCCeeEEEEcC
Confidence 98875 999999999999999998765 45678999999999987 567899999999999999999999999999
Q ss_pred CCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhh
Q psy2671 338 HTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK 416 (573)
Q Consensus 338 h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (573)
|...|.+++|++++ .+++|+.|++|++||++++.....+.
T Consensus 225 h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~--------------------------------------- 265 (340)
T 1got_B 225 HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS--------------------------------------- 265 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---------------------------------------
T ss_pred CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc---------------------------------------
Confidence 99999999998876 68888888888888877554321110
Q ss_pred hhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE
Q psy2671 417 HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496 (573)
Q Consensus 417 ~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~ 496 (573)
...+...|.+++|+|+|++|++|+.||.|++||..+++.+.
T Consensus 266 ---------------------------------------~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~ 306 (340)
T 1got_B 266 ---------------------------------------HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG 306 (340)
T ss_dssp ---------------------------------------CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred ---------------------------------------cCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEee
Confidence 01123458999999999999999999999999999999999
Q ss_pred eecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671 497 TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530 (573)
Q Consensus 497 ~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd 530 (573)
.+.+|...|++++|+|||++||+|+.|++|++||
T Consensus 307 ~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 307 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999999999999999999999996
No 15
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.6e-47 Score=380.56 Aligned_cols=293 Identities=25% Similarity=0.469 Sum_probs=247.8
Q ss_pred cccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEEC
Q psy2671 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS 278 (573)
Q Consensus 199 ~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~ 278 (573)
|..++.||.+.|++++|+|++++|++|+.|++|+|||+.+++....+.+|...|.+++|+|+|++|++|+.|+.+++|++
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEEC
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEEC
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCc------eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-----cCCCccEEEEEE
Q psy2671 279 STGK------QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-----TSHTRSVTCIRW 347 (573)
Q Consensus 279 ~~~~------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-----~~h~~~v~~~~~ 347 (573)
.+.. .....+.+|...|.++.|.|. .+.++++++.|++|++||+.+++.+..+ .+|...|.++.|
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~----~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 213 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPD----QETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSI 213 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSS----SSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEE
T ss_pred CCCccccCCccceeeccCCCcceEEEEEecC----CCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEe
Confidence 7532 123456799999998888763 3457999999999999999988777655 345555555555
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC
Q psy2671 348 GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP 427 (573)
Q Consensus 348 ~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (573)
.+ +
T Consensus 214 ~~-----------------------------------------------------------------------------~ 216 (380)
T 3iz6_a 214 NS-----------------------------------------------------------------------------L 216 (380)
T ss_dssp CS-----------------------------------------------------------------------------S
T ss_pred ec-----------------------------------------------------------------------------C
Confidence 32 1
Q ss_pred CCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc-----
Q psy2671 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV----- 502 (573)
Q Consensus 428 ~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~----- 502 (573)
++.++++|+.|++|++||++........+.+|...|++++|+|++++|++|+.||+|++||.++++.+..+..+.
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~ 296 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDN 296 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccccc
Confidence 244566666666666666654444556677899999999999999999999999999999999999888776543
Q ss_pred --ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccc----cCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 503 --QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL----PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 503 --~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l----~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
..|++++|+|+|++|++|+.|+.|++||+..++....+ .+|.+.|.+++|+|||++|+|||.|++|++|+
T Consensus 297 ~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 297 ELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp SSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred ccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence 24889999999999999999999999999888776555 68999999999999999999999999999997
No 16
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.3e-46 Score=367.78 Aligned_cols=291 Identities=24% Similarity=0.419 Sum_probs=251.6
Q ss_pred cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD 182 (573)
Q Consensus 103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (573)
...|.||.+.|++++|+|++++|||||.|++|+|||..++....
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~------------------------------------ 100 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEH------------------------------------ 100 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE------------------------------------
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcce------------------------------------
Confidence 34678999999999999999999999999999999987764331
Q ss_pred EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC------eeeEEecCCCCcEEEEE
Q psy2671 183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ------TPLFKCEGHKHWVLCIA 256 (573)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~------~~~~~~~~h~~~V~~v~ 256 (573)
.+..|...|.+++|+|+|.++++|+.|+.+++|++... .....+.+|...|.+++
T Consensus 101 -------------------~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 161 (354)
T 2pbi_B 101 -------------------AVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACS 161 (354)
T ss_dssp -------------------EEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEE
T ss_pred -------------------EEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEE
Confidence 12357788999999999999999999999999998643 23456678999999999
Q ss_pred EcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec
Q psy2671 257 WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT 336 (573)
Q Consensus 257 ~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 336 (573)
|+|++.+|++++.|++|++||+++++.+ ..+.+|...|.++.|.|. .+++.|++++.||+|++||+.+++++..+.
T Consensus 162 ~~~~~~~l~t~s~D~~v~lwd~~~~~~~-~~~~~h~~~v~~~~~~~~---~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~ 237 (354)
T 2pbi_B 162 FTNSDMQILTASGDGTCALWDVESGQLL-QSFHGHGADVLCLDLAPS---ETGNTFVSGGCDKKAMVWDMRSGQCVQAFE 237 (354)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEECCC---SSCCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EeCCCCEEEEEeCCCcEEEEeCCCCeEE-EEEcCCCCCeEEEEEEeC---CCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 9999999999999999999999998765 457789999999998763 356799999999999999999999999999
Q ss_pred CCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhh
Q psy2671 337 SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS 415 (573)
Q Consensus 337 ~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (573)
+|...|.+++|++++ .+++++.|++|++||++.+.....+..
T Consensus 238 ~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~------------------------------------- 280 (354)
T 2pbi_B 238 THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSK------------------------------------- 280 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-------------------------------------
T ss_pred CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-------------------------------------
Confidence 999999999998876 788899999999998875432211100
Q ss_pred hhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEE
Q psy2671 416 KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI 495 (573)
Q Consensus 416 ~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~ 495 (573)
..+...+.+++|+|+|++|++|+.|++|++||..+++.+
T Consensus 281 -----------------------------------------~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~ 319 (354)
T 2pbi_B 281 -----------------------------------------ESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRV 319 (354)
T ss_dssp -----------------------------------------TTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEE
T ss_pred -----------------------------------------CCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceE
Confidence 011235789999999999999999999999999999999
Q ss_pred EeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671 496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530 (573)
Q Consensus 496 ~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd 530 (573)
..+.+|...|++++|+|||++||+|+.|++|++|+
T Consensus 320 ~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 320 SILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999999999999999996
No 17
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.8e-46 Score=366.85 Aligned_cols=287 Identities=24% Similarity=0.428 Sum_probs=247.0
Q ss_pred cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280 (573)
Q Consensus 201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~ 280 (573)
.++.||.+.|++++|+|++++||||+.|++|+|||..+++....+..|...|.+++|+|+|.+|++|+.|+.+++|++..
T Consensus 58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~ 137 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTF 137 (354)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCC
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEec
Confidence 45679999999999999999999999999999999999988888899999999999999999999999999999999865
Q ss_pred Cce-----ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC---cE
Q psy2671 281 GKQ-----IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS---GL 352 (573)
Q Consensus 281 ~~~-----~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~---~~ 352 (573)
... ....+.+|...|.++.|.| ++..+++++.|++|++||+.+++++..+.+|...|.++.+.++ ..
T Consensus 138 ~~~~~~~~~~~~~~~h~~~v~~~~~~~-----~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 138 DKNENMAAKKKSVAMHTNYLSACSFTN-----SDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp CTTCCSGGGCEEEEECSSCEEEEEECS-----SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred cccccccccceeeeccCCcEEEEEEeC-----CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 421 1223557999999999876 4578999999999999999999988888899888888887642 24
Q ss_pred EEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE
Q psy2671 353 IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL 432 (573)
Q Consensus 353 l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 432 (573)
+++|+.|++|++||++++.
T Consensus 213 l~sgs~Dg~v~~wd~~~~~------------------------------------------------------------- 231 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQ------------------------------------------------------------- 231 (354)
T ss_dssp EEEEETTSCEEEEETTTCC-------------------------------------------------------------
T ss_pred EEEEeCCCeEEEEECCCCc-------------------------------------------------------------
Confidence 5555555555555544332
Q ss_pred EEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC--cceEEEEEE
Q psy2671 433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAW 510 (573)
Q Consensus 433 ~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h--~~~v~~v~~ 510 (573)
....+.+|...|++++|+|++.+|++|+.|++|++||++.++.+..+..+ ...+.+++|
T Consensus 232 -------------------~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 232 -------------------CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp -------------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred -------------------EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 23345567888999999999999999999999999999998877766543 457899999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 511 SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 511 s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
+|+|++|++|+.|++|++||+.+++.+..+.+|.+.|++++|+||+++|++|+.|++|++|+
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999999998889999999999999999999999999999999995
No 18
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.7e-46 Score=366.35 Aligned_cols=295 Identities=29% Similarity=0.540 Sum_probs=237.2
Q ss_pred cccCCCccc-cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671 103 TSSMPGHAE-AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV 181 (573)
Q Consensus 103 ~~~~~gH~~-~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (573)
...+++|.+ .|++++|+|+|++||||+.|++|||||+.++.....
T Consensus 8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~---------------------------------- 53 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICK---------------------------------- 53 (345)
T ss_dssp EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEE----------------------------------
T ss_pred eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceee----------------------------------
Confidence 446778988 999999999999999999999999999876532210
Q ss_pred EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC--eeeEEecCCCCcEEEEEEcC
Q psy2671 182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ--TPLFKCEGHKHWVLCIAWSP 259 (573)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~--~~~~~~~~h~~~V~~v~~s~ 259 (573)
.....||.+.|.+++|+|+|++||+|+.|++|+|||+.++ +.+..+.+|...|.+++|+|
T Consensus 54 ------------------~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp 115 (345)
T 3fm0_A 54 ------------------SVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP 115 (345)
T ss_dssp ------------------EEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECT
T ss_pred ------------------eeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeC
Confidence 0113589999999999999999999999999999998776 45678899999999999999
Q ss_pred CCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC
Q psy2671 260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT 339 (573)
Q Consensus 260 dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~ 339 (573)
++++|++|+.|++|++||+..+... .++..+.+|.
T Consensus 116 ~~~~l~s~s~D~~v~iwd~~~~~~~---------------------------------------------~~~~~~~~h~ 150 (345)
T 3fm0_A 116 SGNLLATCSRDKSVWVWEVDEEDEY---------------------------------------------ECVSVLNSHT 150 (345)
T ss_dssp TSSEEEEEETTSCEEEEEECTTSCE---------------------------------------------EEEEEECCCC
T ss_pred CCCEEEEEECCCeEEEEECCCCCCe---------------------------------------------EEEEEecCcC
Confidence 9999999999999999998654211 1123345677
Q ss_pred ccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671 340 RSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418 (573)
Q Consensus 340 ~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (573)
..|.+++|++++ .+++++.|++|++|+.+++..
T Consensus 151 ~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~---------------------------------------------- 184 (345)
T 3fm0_A 151 QDVKHVVWHPSQELLASASYDDTVKLYREEEDDW---------------------------------------------- 184 (345)
T ss_dssp SCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE----------------------------------------------
T ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE----------------------------------------------
Confidence 777788777655 566667777777776433211
Q ss_pred hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCC-------
Q psy2671 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI------- 491 (573)
Q Consensus 419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~------- 491 (573)
.....+.+|...|.+++|+|+|++|++|+.||+|++||...
T Consensus 185 --------------------------------~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~ 232 (345)
T 3fm0_A 185 --------------------------------VCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232 (345)
T ss_dssp --------------------------------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCC
T ss_pred --------------------------------EEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccc
Confidence 11234567888999999999999999999999999998532
Q ss_pred --------CeEEEeecC-CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc---------cccccCcCCCEEEEEEc
Q psy2671 492 --------GKFITTLRG-HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI---------EQDLPGHGDEVYAVDWA 553 (573)
Q Consensus 492 --------~~~~~~~~~-h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~---------~~~l~~h~~~v~~~~~s 553 (573)
.+++.++.+ |...|++++|+|++..||+++.|+.|++|+...... .....+|.+.|++++|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~ 312 (345)
T 3fm0_A 233 ACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWN 312 (345)
T ss_dssp CCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEEC
T ss_pred eeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEe
Confidence 133455555 888999999999999999999999999999876432 12346899999999999
Q ss_pred cCC-CEEEEeeCCCcEEEcc
Q psy2671 554 PDG-EKVASGGKDKVLRLWQ 572 (573)
Q Consensus 554 ~d~-~~l~s~~~d~~i~iw~ 572 (573)
|++ .+|||||.||+|++|+
T Consensus 313 p~~~~~laS~s~Dg~v~~W~ 332 (345)
T 3fm0_A 313 PKEPGLLASCSDDGEVAFWK 332 (345)
T ss_dssp SSSTTEEEEEETTSCEEEEE
T ss_pred CCCceEEEEcCCCCcEEEEE
Confidence 997 4899999999999997
No 19
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-45 Score=406.05 Aligned_cols=399 Identities=13% Similarity=0.176 Sum_probs=293.5
Q ss_pred CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK 187 (573)
Q Consensus 108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
.|..+|.+++|+| |++|||++.|++|+|||+.+++++..
T Consensus 56 ~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~---------------------------------------- 94 (902)
T 2oaj_A 56 EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTT---------------------------------------- 94 (902)
T ss_dssp SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEE----------------------------------------
T ss_pred CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEE----------------------------------------
Confidence 4888999999999 88999999999999999988765421
Q ss_pred eeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee-----------EEecCCCCcEEEEE
Q psy2671 188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL-----------FKCEGHKHWVLCIA 256 (573)
Q Consensus 188 ~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~-----------~~~~~h~~~V~~v~ 256 (573)
+ .|.+.|++++|+|++++|++|+.||+|++||+.++... ....+|...|.+++
T Consensus 95 ---------------~-~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~ 158 (902)
T 2oaj_A 95 ---------------V-FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQ 158 (902)
T ss_dssp ---------------E-ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEE
T ss_pred ---------------E-cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEE
Confidence 1 15578999999999999999999999999999987653 23468999999999
Q ss_pred EcCC-CCeEEEEeeCCeEEEEECCCCceeccc-----------------ccCCcccEEEEEecccccCCCCCEEEEEeCC
Q psy2671 257 WSPD-SKQLVSGCKNGVIHAWDSSTGKQIGQP-----------------MRGHKQWITALSWEPFHLNHQCRRFASSGKD 318 (573)
Q Consensus 257 ~s~d-g~~l~sgs~dg~i~vwd~~~~~~~~~~-----------------~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d 318 (573)
|+|+ +..|++|+.||.| +||+++++.+... ..+|...|.+++|.| ++++|++++.|
T Consensus 159 ~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp-----dg~~lasgs~D 232 (902)
T 2oaj_A 159 WNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP-----NSLHIITIHED 232 (902)
T ss_dssp EETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT-----TSSEEEEEETT
T ss_pred EccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC-----CCCEEEEEECC
Confidence 9996 4689999999999 9999988654221 123467899999987 57899999999
Q ss_pred CcEEEEECCCCeEEEE--e---cC-------------CCccEEEEEEC----CC--cEEEEEeCCC-----eEEEEe---
Q psy2671 319 GAIRIWDVILSQCVRV--L---TS-------------HTRSVTCIRWG----GS--GLIYSASQDR-----TIKVWR--- 366 (573)
Q Consensus 319 g~v~iwd~~~~~~~~~--~---~~-------------h~~~v~~~~~~----~~--~~l~s~s~d~-----~i~vw~--- 366 (573)
|+|++||+.+++++.. + .. |...|.+++|+ ++ ..+++|+.|. .+++|+
T Consensus 233 g~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~ 312 (902)
T 2oaj_A 233 NSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGY 312 (902)
T ss_dssp CCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCC
Confidence 9999999998877653 2 12 34578888883 33 2455665442 455554
Q ss_pred --------------------------------------------------------------------CCCCeeeEe---
Q psy2671 367 --------------------------------------------------------------------ASDGVMCRT--- 375 (573)
Q Consensus 367 --------------------------------------------------------------------~~~~~~~~~--- 375 (573)
+.+|.....
T Consensus 313 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~ 392 (902)
T 2oaj_A 313 TPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASL 392 (902)
T ss_dssp CCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGG
T ss_pred CCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCccccccc
Confidence 332211110
Q ss_pred ----c----------------------------------cCCcceeeEEEeccCceeEEEEcCCCcee-eCCCCchhhh-
Q psy2671 376 ----L----------------------------------EGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESS- 415 (573)
Q Consensus 376 ----~----------------------------------~~~~~~v~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~- 415 (573)
+ .||...+..++++++....+....++.++ |+........
T Consensus 393 ~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~ 472 (902)
T 2oaj_A 393 FPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDN 472 (902)
T ss_dssp SCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTT
T ss_pred CCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCC
Confidence 1 11222222233344444455555555544 3332221100
Q ss_pred -------------hh-hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc-------------------------------
Q psy2671 416 -------------KH-ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK------------------------------- 450 (573)
Q Consensus 416 -------------~~-~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~------------------------------- 450 (573)
.+ ......+++|++.+||+|+.||+|++|++.+.+
T Consensus 473 ~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (902)
T 2oaj_A 473 ASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVD 552 (902)
T ss_dssp BCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEE
T ss_pred ceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcccccc
Confidence 00 011223568999999999999999999986542
Q ss_pred -------------cceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE-----eec-CCcceEEEEEEC
Q psy2671 451 -------------KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT-----TLR-GHVQAVYMVAWS 511 (573)
Q Consensus 451 -------------~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~-----~~~-~h~~~v~~v~~s 511 (573)
.++..+.+|...|++|+||||| +||+|+.|++|+|||++++..+. .+. +|...|++++||
T Consensus 553 ~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs 631 (902)
T 2oaj_A 553 VRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFV 631 (902)
T ss_dssp CGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEE
T ss_pred ccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEE
Confidence 1256677899999999999999 99999999999999998887653 343 899999999999
Q ss_pred -----CCC---CEEEEEeCCCcEEEEeC---CcccccccccCcC-----CCEEEEE-Ec---------------------
Q psy2671 512 -----SDS---RLLVSGSADSTLKVWNM---KTKKIEQDLPGHG-----DEVYAVD-WA--------------------- 553 (573)
Q Consensus 512 -----~dg---~~las~s~D~~v~vwd~---~~~~~~~~l~~h~-----~~v~~~~-~s--------------------- 553 (573)
||| ++|++|+.|++|++||+ .+++....+.+|. ++|.++. |+
T Consensus 632 ~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~ 711 (902)
T 2oaj_A 632 IMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGL 711 (902)
T ss_dssp EEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTC
T ss_pred EEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCC
Confidence 886 89999999999999999 7888777777764 6787776 76
Q ss_pred -cCCCEEEEeeCCCcEEEcc
Q psy2671 554 -PDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 554 -~d~~~l~s~~~d~~i~iw~ 572 (573)
+++..|+++ +..||||+
T Consensus 712 ~~~~~~l~~~--~~~ir~~~ 729 (902)
T 2oaj_A 712 CIPGIVLITG--FDDIRLIT 729 (902)
T ss_dssp CCCEEEEEEC--SSEEEEEC
T ss_pred CCCeEEEEEe--ccceEEEe
Confidence 455444444 77899997
No 20
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.5e-45 Score=355.99 Aligned_cols=298 Identities=24% Similarity=0.422 Sum_probs=245.7
Q ss_pred cccCCCccccEEEEEEcCCC-CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671 103 TSSMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV 181 (573)
Q Consensus 103 ~~~~~gH~~~V~~l~~s~~~-~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (573)
...|.||.++|++++|+|++ ++|+|||.|++|++||+.+.....
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~----------------------------------- 54 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKF----------------------------------- 54 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEE-----------------------------------
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccc-----------------------------------
Confidence 34678999999999999965 899999999999999986432110
Q ss_pred EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCC
Q psy2671 182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261 (573)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg 261 (573)
..+...+.||...|.+++|+|+|++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++
T Consensus 55 ---------------~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~ 119 (319)
T 3frx_A 55 ---------------GVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA 119 (319)
T ss_dssp ---------------EEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred ---------------cccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCC
Confidence 00113456899999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEeccccc-CCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc
Q psy2671 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL-NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR 340 (573)
Q Consensus 262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~ 340 (573)
.+|++|+.|++|++||++.. .+ ..+.+|...|.++.|.|... ..++..+++++.|+.|++||+...+....+.+|..
T Consensus 120 ~~l~s~s~D~~i~vwd~~~~-~~-~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~ 197 (319)
T 3frx_A 120 SMIISGSRDKTIKVWTIKGQ-CL-ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNS 197 (319)
T ss_dssp CEEEEEETTSCEEEEETTSC-EE-EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCS
T ss_pred CEEEEEeCCCeEEEEECCCC-eE-EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCC
Confidence 99999999999999999743 33 35678999999999987532 22456899999999999999999999999999999
Q ss_pred cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671 341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL 419 (573)
Q Consensus 341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (573)
.|.+++|++++ .+++++.|++|++||+.++....
T Consensus 198 ~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~--------------------------------------------- 232 (319)
T 3frx_A 198 NINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY--------------------------------------------- 232 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE---------------------------------------------
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE---------------------------------------------
Confidence 99999998776 57777778888887776543321
Q ss_pred hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671 420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR 499 (573)
Q Consensus 420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~ 499 (573)
.+. +...|.+++|+|++.+|++++.+ .+++|+...+..+..+.
T Consensus 233 -----------------------------------~~~-~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~ 275 (319)
T 3frx_A 233 -----------------------------------TLS-AQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLR 275 (319)
T ss_dssp -----------------------------------EEE-CCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEEC
T ss_pred -----------------------------------Eec-CCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccC
Confidence 111 12458899999999999988755 59999998877666554
Q ss_pred --------CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671 500 --------GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534 (573)
Q Consensus 500 --------~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~ 534 (573)
.|...+.+++|+|||++|++|+.|++|++||+.++
T Consensus 276 ~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 276 PEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred ccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 24567899999999999999999999999998764
No 21
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.4e-46 Score=375.37 Aligned_cols=302 Identities=24% Similarity=0.459 Sum_probs=255.2
Q ss_pred ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV 181 (573)
Q Consensus 102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (573)
+...|.||.++|++++|+|++++|||||.|++|+|||..+++++.
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~----------------------------------- 102 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTH----------------------------------- 102 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE-----------------------------------
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccce-----------------------------------
Confidence 445788999999999999999999999999999999998765432
Q ss_pred EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe-------eeEEecCCCCcEEE
Q psy2671 182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-------PLFKCEGHKHWVLC 254 (573)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~-------~~~~~~~h~~~V~~ 254 (573)
.+.+|...|.+++|+|+|++||+|+.|+.|++||+.+.. ....+.+|.+.|.+
T Consensus 103 --------------------~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~ 162 (380)
T 3iz6_a 103 --------------------AIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASS 162 (380)
T ss_dssp --------------------EEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCC
T ss_pred --------------------EEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEE
Confidence 234688999999999999999999999999999987532 23457899999999
Q ss_pred EEEcCCC-CeEEEEeeCCeEEEEECCCCceecc----cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC-C
Q psy2671 255 IAWSPDS-KQLVSGCKNGVIHAWDSSTGKQIGQ----PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI-L 328 (573)
Q Consensus 255 v~~s~dg-~~l~sgs~dg~i~vwd~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~-~ 328 (573)
++|+|++ .+|++|+.|++|++||+.+++.+.. ...+|...|.++.|.+. +++.+++++.|++|++||+. .
T Consensus 163 ~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~~l~sgs~D~~v~~wd~~~~ 238 (380)
T 3iz6_a 163 CQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSL----NANMFISGSCDTTVRLWDLRIT 238 (380)
T ss_dssp CBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSS----SCCEEEEEETTSCEEEEETTTT
T ss_pred EEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecC----CCCEEEEEECCCeEEEEECCCC
Confidence 9999974 5799999999999999999876532 22689999999998763 56789999999999999997 4
Q ss_pred CeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeC
Q psy2671 329 SQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407 (573)
Q Consensus 329 ~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~ 407 (573)
.+++..+.+|...|.+++|++++ .+++|+.|++|++||++++.....+..+..
T Consensus 239 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~-------------------------- 292 (380)
T 3iz6_a 239 SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPD-------------------------- 292 (380)
T ss_dssp CCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCS--------------------------
T ss_pred CcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccc--------------------------
Confidence 57788899999999999999887 799999999999999988765544332110
Q ss_pred CCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEE
Q psy2671 408 PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487 (573)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lw 487 (573)
....+...|.+++|+|+|++|++|+.||.|++|
T Consensus 293 -----------------------------------------------~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vw 325 (380)
T 3iz6_a 293 -----------------------------------------------RNDNELPIVTSVAFSISGRLLFAGYSNGDCYVW 325 (380)
T ss_dssp -----------------------------------------------SSCCSSCSCSEEEECSSSSEEEEECTTSCEEEE
T ss_pred -----------------------------------------------ccccccCceEEEEECCCCCEEEEEECCCCEEEE
Confidence 001122347899999999999999999999999
Q ss_pred eCCCCeEEEee----cCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc
Q psy2671 488 DGRIGKFITTL----RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535 (573)
Q Consensus 488 d~~~~~~~~~~----~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~ 535 (573)
|..+++.+..+ .+|...|++++|+|||++|++|+.|++|++|++...+
T Consensus 326 d~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 326 DTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp ETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 99999887776 6899999999999999999999999999999987653
No 22
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1e-45 Score=365.43 Aligned_cols=283 Identities=19% Similarity=0.295 Sum_probs=234.2
Q ss_pred CCCCcEEEEEEcCCCCeEEEEeC------CCeEEEEECCCCeee----EEecCCCCcEEEEEEcCCCCeEEEEeeCCeEE
Q psy2671 205 GHAEAVISVKFSPNGRSLASGSG------DTTVRFWDVTTQTPL----FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH 274 (573)
Q Consensus 205 gh~~~V~~~~fsp~g~~las~s~------d~~i~iwd~~~~~~~----~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~ 274 (573)
+|...|.+++|||||++||+|+. |++|++|+..++.+. ....+|...|.+++|+|++. +++++.||+|+
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~ 118 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVE 118 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEE
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEE
Confidence 69999999999999999999997 788999998776542 33457888999999999985 66788999999
Q ss_pred EEECCCCceecc---cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc
Q psy2671 275 AWDSSTGKQIGQ---PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG 351 (573)
Q Consensus 275 vwd~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 351 (573)
+||+.+++.... ...+|...|.+++|.| ++++|++++.|++|++||+.+++++..+.+|...|.+++|++++
T Consensus 119 lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-----dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 119 LWEILEKESLLVNKFAKYEHDDIVKTLSVFS-----DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp EC--------CCCCEEECCCSSCEEEEEECS-----SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC
T ss_pred EeeccccceeEEEeeccCCCCCCEEEEEECC-----CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC
Confidence 999988764321 2358999999999976 67899999999999999999999999999999999999997654
Q ss_pred --EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC
Q psy2671 352 --LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG 429 (573)
Q Consensus 352 --~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (573)
.+++++.|++|++||++++.....
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~~~------------------------------------------------------ 219 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPATR------------------------------------------------------ 219 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCBCB------------------------------------------------------
T ss_pred CceeeeeccCCceEEEECCCCceeee------------------------------------------------------
Confidence 577777788888887765432211
Q ss_pred cEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCC-CCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEE
Q psy2671 430 EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD-GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV 508 (573)
Q Consensus 430 ~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~-g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v 508 (573)
.....|...+.+++|+|+ +.+||+|+.|+.|++||+++++.+..+.+|...|+++
T Consensus 220 ------------------------~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l 275 (357)
T 4g56_B 220 ------------------------IDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGL 275 (357)
T ss_dssp ------------------------CCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEE
T ss_pred ------------------------eeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEE
Confidence 112234566899999997 5689999999999999999999999999999999999
Q ss_pred EECCCC-CEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEcc-CCCEEEEeeCCCcEEEcc
Q psy2671 509 AWSSDS-RLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAP-DGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 509 ~~s~dg-~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~-d~~~l~s~~~d~~i~iw~ 572 (573)
+|+|++ ++||+|+.|++|+|||++++++++.+ +|.+.|++++|+| |+++|+|+|.|++|++|+
T Consensus 276 ~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~ 340 (357)
T 4g56_B 276 AYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHH 340 (357)
T ss_dssp EECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEE
Confidence 999987 58999999999999999999887655 7999999999998 799999999999999997
No 23
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-46 Score=378.41 Aligned_cols=328 Identities=17% Similarity=0.310 Sum_probs=270.4
Q ss_pred ccccEEEEEEcCCCC-eeEEe----------eCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCc
Q psy2671 109 HAEAVISVKFSPNGR-SLASG----------SGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNT 177 (573)
Q Consensus 109 H~~~V~~l~~s~~~~-~lat~----------s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (573)
+...|.+++|+|+++ +||+| +.|++|+|||+.++....
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~------------------------------- 59 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEK------------------------------- 59 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCS-------------------------------
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCc-------------------------------
Confidence 455788999999987 99999 899999999998764210
Q ss_pred cceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC----CeeeEEecCCCCcEE
Q psy2671 178 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QTPLFKCEGHKHWVL 253 (573)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~----~~~~~~~~~h~~~V~ 253 (573)
+ ....+|...|.+++|+|++++|++|+.|+.|++||+.+ .+.+..+.+|...|.
T Consensus 60 ---------------------~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~ 117 (416)
T 2pm9_A 60 ---------------------P-IASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVK 117 (416)
T ss_dssp ---------------------C-SCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCC
T ss_pred ---------------------E-EEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceE
Confidence 0 01225889999999999999999999999999999987 357788899999999
Q ss_pred EEEEcCC-CCeEEEEeeCCeEEEEECCCCc------eec--ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEE
Q psy2671 254 CIAWSPD-SKQLVSGCKNGVIHAWDSSTGK------QIG--QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324 (573)
Q Consensus 254 ~v~~s~d-g~~l~sgs~dg~i~vwd~~~~~------~~~--~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iw 324 (573)
+++|+|+ +++|++++.||.|++||+.++. ... ....+|...|.+++|.|. .+.++++++.||.|++|
T Consensus 118 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~l~~~~~dg~v~iw 193 (416)
T 2pm9_A 118 TVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQS----LAHVFASAGSSNFASIW 193 (416)
T ss_dssp EEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSS----CTTEEEEESSSSCEEEE
T ss_pred EEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCC----CCcEEEEEcCCCCEEEE
Confidence 9999998 8999999999999999998876 221 224678899999999873 25789999999999999
Q ss_pred ECCCCeEEEEecCC------CccEEEEEECCCc--EEEEEeCCC---eEEEEeCCCCeeeEeccCCcceeeEEEeccCce
Q psy2671 325 DVILSQCVRVLTSH------TRSVTCIRWGGSG--LIYSASQDR---TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYL 393 (573)
Q Consensus 325 d~~~~~~~~~~~~h------~~~v~~~~~~~~~--~l~s~s~d~---~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 393 (573)
|+..++.+..+..| ...|.+++|++++ .+++++.|+ .|++||
T Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d--------------------------- 246 (416)
T 2pm9_A 194 DLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWD--------------------------- 246 (416)
T ss_dssp ETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEE---------------------------
T ss_pred ECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEe---------------------------
Confidence 99998888877765 5667777776553 455555554 555554
Q ss_pred eEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec-cccccEEEEEECC-C
Q psy2671 394 MRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT-GHQQLINCVEFSP-D 471 (573)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~sp-~ 471 (573)
+++.......+. +|...|.+++|+| +
T Consensus 247 ----------------------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 274 (416)
T 2pm9_A 247 ----------------------------------------------------LRNANTPLQTLNQGHQKGILSLDWCHQD 274 (416)
T ss_dssp ----------------------------------------------------TTSTTSCSBCCCSCCSSCEEEEEECSSC
T ss_pred ----------------------------------------------------CCCCCCCcEEeecCccCceeEEEeCCCC
Confidence 444333344455 7888999999999 9
Q ss_pred CCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCC-CEEEEEeCCCcEEEEeCCcccccccccC--------
Q psy2671 472 GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS-RLLVSGSADSTLKVWNMKTKKIEQDLPG-------- 542 (573)
Q Consensus 472 g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg-~~las~s~D~~v~vwd~~~~~~~~~l~~-------- 542 (573)
+++|++++.||.|++||.++++.+..+.+|...|++++|+|++ .+|++++.|+.|++|++.+.+.......
T Consensus 275 ~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~ 354 (416)
T 2pm9_A 275 EHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQES 354 (416)
T ss_dssp SSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------
T ss_pred CCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCC
Confidence 9999999999999999999999999999999999999999999 8999999999999999987664332211
Q ss_pred ---------------------------cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 543 ---------------------------HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 543 ---------------------------h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
|...+.+++|+|||++|++++.|++|+||+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~ 411 (416)
T 2pm9_A 355 ETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITN 411 (416)
T ss_dssp ------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBC
T ss_pred cccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEE
Confidence 677888999999999999999999999997
No 24
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.2e-44 Score=354.29 Aligned_cols=302 Identities=23% Similarity=0.392 Sum_probs=233.0
Q ss_pred cccCCCccccEEEEEE-----cC-CCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCC
Q psy2671 103 TSSMPGHAEAVISVKF-----SP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLN 176 (573)
Q Consensus 103 ~~~~~gH~~~V~~l~~-----s~-~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (573)
...|.||.++|++++| ++ ++++|||||.|++|||||+.++.....
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~----------------------------- 64 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY----------------------------- 64 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB-----------------------------
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc-----------------------------
Confidence 3467899999999999 77 999999999999999999875432100
Q ss_pred ccceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEE
Q psy2671 177 TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIA 256 (573)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~ 256 (573)
...+...+.||...|.+++|+|++.++++|+.|++|++||+.+++.+..+.+|...|.+++
T Consensus 65 -------------------~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~ 125 (343)
T 2xzm_R 65 -------------------FGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVA 125 (343)
T ss_dssp -------------------SEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEE
T ss_pred -------------------cccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEE
Confidence 0001124568999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCeEEEEeeCCeEEEEECCCCceec-ccccCCcccEEEEEeccccc-----CCCCCEEEEEeCCCcEEEEECCCCe
Q psy2671 257 WSPDSKQLVSGCKNGVIHAWDSSTGKQIG-QPMRGHKQWITALSWEPFHL-----NHQCRRFASSGKDGAIRIWDVILSQ 330 (573)
Q Consensus 257 ~s~dg~~l~sgs~dg~i~vwd~~~~~~~~-~~~~~h~~~v~~~~~~~~~~-----~~~~~~l~s~~~dg~v~iwd~~~~~ 330 (573)
|+|++++|++|+.|++|++||+....... ....+|...|.++.|.|... .+.+.++++++.||+|++||. ..+
T Consensus 126 ~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~ 204 (343)
T 2xzm_R 126 FSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQ 204 (343)
T ss_dssp ECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTE
T ss_pred ECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCc
Confidence 99999999999999999999997433221 12347889999999988531 122357888888888888883 445
Q ss_pred EEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCC
Q psy2671 331 CVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPA 409 (573)
Q Consensus 331 ~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~ 409 (573)
....+.+|...|.+++|++++ .|++|+.|++|++||+.
T Consensus 205 ~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~----------------------------------------- 243 (343)
T 2xzm_R 205 IRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDIL----------------------------------------- 243 (343)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESS-----------------------------------------
T ss_pred eeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECC-----------------------------------------
Confidence 556667777777777776655 45566666666666542
Q ss_pred CchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy2671 410 NPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDG 489 (573)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~ 489 (573)
........+ .+...|.+++|+|++++++++ .|+.|++||.
T Consensus 244 --------------------------------------~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~ 283 (343)
T 2xzm_R 244 --------------------------------------NLTYPQREF-DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNL 283 (343)
T ss_dssp --------------------------------------CCSSCSEEE-ECSSCEEEEEECSSSCEEEEE-ESSCEEEEES
T ss_pred --------------------------------------CCcccceee-cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEe
Confidence 111111111 123459999999999988755 5888999999
Q ss_pred CCCeEEE--eec-----------CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671 490 RIGKFIT--TLR-----------GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534 (573)
Q Consensus 490 ~~~~~~~--~~~-----------~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~ 534 (573)
.+++... .+. +|...|++++|+|+|++||+|+.||+|++|++.++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 284 MTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp SSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred CCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 8765433 333 68888999999999999999999999999998765
No 25
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.3e-45 Score=356.79 Aligned_cols=282 Identities=17% Similarity=0.259 Sum_probs=233.0
Q ss_pred CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC-----------CeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeE
Q psy2671 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-----------QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVI 273 (573)
Q Consensus 205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~-----------~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i 273 (573)
.|...|.+++|+|||++|++++ |+++++||... .........|...|.+++|+|++ +|++|+.||+|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence 5777899999999999999887 77888887321 00111122356779999999985 68899999999
Q ss_pred EEEECCCCceec---ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC
Q psy2671 274 HAWDSSTGKQIG---QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS 350 (573)
Q Consensus 274 ~vwd~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~ 350 (573)
++||+++++.+. ....+|...|.+++|.| ++++|++++.|++|++||+.+++++..+.+|...|.+++|+++
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp-----dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~ 180 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLS-----SGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPH 180 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSS
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECC-----CCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCC
Confidence 999999886542 23458999999999976 6789999999999999999999999999999999999999876
Q ss_pred c--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671 351 G--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE 428 (573)
Q Consensus 351 ~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (573)
+ .+++++.|++|++||+++++....+.
T Consensus 181 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~--------------------------------------------------- 209 (344)
T 4gqb_B 181 KDSVFLSCSEDNRILLWDTRCPKPASQIG--------------------------------------------------- 209 (344)
T ss_dssp CTTEEEEEETTSCEEEEETTSSSCEEECC---------------------------------------------------
T ss_pred CCCceeeeccccccccccccccceeeeee---------------------------------------------------
Confidence 5 67888888888888887654332221
Q ss_pred CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEE
Q psy2671 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507 (573)
Q Consensus 429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~ 507 (573)
...|...+.+++|+| ++++|++|+.||+|++||.++++.+.++.+|...|++
T Consensus 210 ---------------------------~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~ 262 (344)
T 4gqb_B 210 ---------------------------CSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTG 262 (344)
T ss_dssp -------------------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEE
T ss_pred ---------------------------cceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEE
Confidence 112334578999998 4678999999999999999999999999999999999
Q ss_pred EEECCCC-CEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCE-EEEeeCCCcEEEcc
Q psy2671 508 VAWSSDS-RLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK-VASGGKDKVLRLWQ 572 (573)
Q Consensus 508 v~~s~dg-~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~-l~s~~~d~~i~iw~ 572 (573)
++|+|++ ++||+|+.|++|+|||++++++. .+.+|.+.|++++|+|+++. |+|+|.|++|++|+
T Consensus 263 v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~ 328 (344)
T 4gqb_B 263 LVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHV 328 (344)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEE
Confidence 9999998 58999999999999999988765 46899999999999999875 67999999999996
No 26
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.3e-44 Score=352.83 Aligned_cols=300 Identities=20% Similarity=0.292 Sum_probs=227.7
Q ss_pred CCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEe
Q psy2671 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ 186 (573)
Q Consensus 107 ~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (573)
..|...|.+++|+|||++|++++ |+++|+||..... +.. ... ....
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~--~~~----------~~~-------------~~~~-------- 72 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWL--FKD----------PCA-------------APNE-------- 72 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEE--ESS----------GGG-------------TTCG--------
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeee--ecc----------ccc-------------cCCc--------
Confidence 35788899999999999999888 8899999853210 000 000 0000
Q ss_pred ceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeE----EecCCCCcEEEEEEcCCCC
Q psy2671 187 KQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF----KCEGHKHWVLCIAWSPDSK 262 (573)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~----~~~~h~~~V~~v~~s~dg~ 262 (573)
..+ .....|...|.+++|+|++ .|++|+.||+|+|||+.+++.+. ...+|...|++++|+|+|+
T Consensus 73 ----------~~~-~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~ 140 (344)
T 4gqb_B 73 ----------GFC-SAGVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT 140 (344)
T ss_dssp ----------GGC-SEEEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS
T ss_pred ----------cee-eeeeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC
Confidence 000 0111356789999999986 68899999999999999876543 3458999999999999999
Q ss_pred eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec--CCCc
Q psy2671 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT--SHTR 340 (573)
Q Consensus 263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~h~~ 340 (573)
+|++|+.|++|++||+++++.+ ..+.+|...|.++.|.|. ....|++++.|++|++||+.++++...+. .|..
T Consensus 141 ~l~sgs~d~~i~iwd~~~~~~~-~~~~~h~~~V~~~~~~~~----~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~ 215 (344)
T 4gqb_B 141 QAVSGSKDICIKVWDLAQQVVL-SSYRAHAAQVTCVAASPH----KDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGY 215 (344)
T ss_dssp EEEEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECSS----CTTEEEEEETTSCEEEEETTSSSCEEECC----CC
T ss_pred EEEEEeCCCeEEEEECCCCcEE-EEEcCcCCceEEEEecCC----CCCceeeeccccccccccccccceeeeeecceeec
Confidence 9999999999999999998766 467899999999999773 23578999999999999999988877664 3444
Q ss_pred cEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671 341 SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA 420 (573)
Q Consensus 341 ~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (573)
.+.+++|++++
T Consensus 216 ~~~~~~~~p~~--------------------------------------------------------------------- 226 (344)
T 4gqb_B 216 LPTSLAWHPQQ--------------------------------------------------------------------- 226 (344)
T ss_dssp CEEEEEECSSC---------------------------------------------------------------------
T ss_pred cceeeeecCCC---------------------------------------------------------------------
Confidence 56666665432
Q ss_pred heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC-CEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG-RIIASASFDKSIKLWDGRIGKFITTLR 499 (573)
Q Consensus 421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~las~s~dg~i~lwd~~~~~~~~~~~ 499 (573)
+.++++|+.||+|++||+++. ..+..+.+|...|++++|+|++ ++||+|+.|++|+|||.++++.+ .+.
T Consensus 227 --------~~~l~sg~~dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~ 296 (344)
T 4gqb_B 227 --------SEVFVFGDENGTVSLVDTKST-SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQ 296 (344)
T ss_dssp --------TTEEEEEETTSEEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EEC
T ss_pred --------CcceEEeccCCcEEEEECCCC-cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEc
Confidence 234444555555555554433 2344567788899999999998 58999999999999999998754 578
Q ss_pred CCcceEEEEEECCCCC-EEEEEeCCCcEEEEeCCcccc
Q psy2671 500 GHVQAVYMVAWSSDSR-LLVSGSADSTLKVWNMKTKKI 536 (573)
Q Consensus 500 ~h~~~v~~v~~s~dg~-~las~s~D~~v~vwd~~~~~~ 536 (573)
+|...|++++|+|+++ +|+++|.|++|++|++.+...
T Consensus 297 ~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 297 AHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred CCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 9999999999999986 577999999999999977543
No 27
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-44 Score=366.17 Aligned_cols=322 Identities=19% Similarity=0.340 Sum_probs=284.4
Q ss_pred CCCCcEEEEEEcCCCC-eEEEEeCCCeEEEEEC----CCCe------eeEEecC----------CCCcEEEEEEcCCCCe
Q psy2671 205 GHAEAVISVKFSPNGR-SLASGSGDTTVRFWDV----TTQT------PLFKCEG----------HKHWVLCIAWSPDSKQ 263 (573)
Q Consensus 205 gh~~~V~~~~fsp~g~-~las~s~d~~i~iwd~----~~~~------~~~~~~~----------h~~~V~~v~~s~dg~~ 263 (573)
.|.+.|.+++|+|+|+ +||+|+.|+.|++||+ .+++ ....+.. |...|.+++|+|++++
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 4668999999999999 9999999999999999 8877 4444443 6889999999999999
Q ss_pred EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc--
Q psy2671 264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS-- 341 (573)
Q Consensus 264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~-- 341 (573)
|++|+.||.|++|| .+++.+ ..+.+|...|.++.|.| +++++++++.||.|++||+.+++....+..+...
T Consensus 123 l~~~~~dg~i~i~~-~~~~~~-~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 195 (425)
T 1r5m_A 123 IVTGVENGELRLWN-KTGALL-NVLNFHRAPIVSVKWNK-----DGTHIISMDVENVTILWNVISGTVMQHFELKETGGS 195 (425)
T ss_dssp EEEEETTSCEEEEE-TTSCEE-EEECCCCSCEEEEEECT-----TSSEEEEEETTCCEEEEETTTTEEEEEECCC-----
T ss_pred EEEEeCCCeEEEEe-CCCCee-eeccCCCccEEEEEECC-----CCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcc
Confidence 99999999999999 445444 45678999999999977 5678999999999999999999998888888776
Q ss_pred -------------EEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCC
Q psy2671 342 -------------VTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408 (573)
Q Consensus 342 -------------v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~ 408 (573)
+.++.|.+++.+++++.|+.|++|++.++.....+.+|...+..++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~------------------- 256 (425)
T 1r5m_A 196 SINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFN------------------- 256 (425)
T ss_dssp ----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEE-------------------
T ss_pred ceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEEC-------------------
Confidence 889999999999999999999999999998888888998888888776
Q ss_pred CCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy2671 409 ANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488 (573)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd 488 (573)
|++.++++++.|+.|++||+.+.. ....+.+|...|.+++|+|++ ++++++.||.|++||
T Consensus 257 ------------------~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d 316 (425)
T 1r5m_A 257 ------------------DTNKLLLSASDDGTLRIWHGGNGN-SQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWS 316 (425)
T ss_dssp ------------------TTTTEEEEEETTSCEEEECSSSBS-CSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEE
T ss_pred ------------------CCCCEEEEEcCCCEEEEEECCCCc-cceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEE
Confidence 457799999999999999987653 455667899999999999999 999999999999999
Q ss_pred CCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc--------------------ccccccCcCC--C
Q psy2671 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK--------------------IEQDLPGHGD--E 546 (573)
Q Consensus 489 ~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~--------------------~~~~l~~h~~--~ 546 (573)
.++++.+..+..|...|.+++|+|++++|++++.|+.|++||+.+++ .+..+.+|.. .
T Consensus 317 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (425)
T 1r5m_A 317 LKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDY 396 (425)
T ss_dssp TTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCC
T ss_pred CCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCc
Confidence 99999999999999999999999999999999999999999999888 7888999976 9
Q ss_pred EEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 547 VYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 547 v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
|++++|+|++++|++++.||.|++|+
T Consensus 397 v~~~~~s~~~~~l~~~~~dg~i~iw~ 422 (425)
T 1r5m_A 397 IFDLSWNCAGNKISVAYSLQEGSVVA 422 (425)
T ss_dssp EEEEEECTTSSEEEEEESSSCCEEEE
T ss_pred eEEEEccCCCceEEEEecCceEEEEe
Confidence 99999999999999999999999997
No 28
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=8e-45 Score=358.97 Aligned_cols=291 Identities=19% Similarity=0.266 Sum_probs=223.6
Q ss_pred CCccccEEEEEEcCCCCeeEEeeC------CCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccce
Q psy2671 107 PGHAEAVISVKFSPNGRSLASGSG------DTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEV 180 (573)
Q Consensus 107 ~gH~~~V~~l~~s~~~~~lat~s~------D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (573)
.+|+..|.+|+|||||++|||||. |++|++|+..++.+...
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~--------------------------------- 85 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNES--------------------------------- 85 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGG---------------------------------
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCccee---------------------------------
Confidence 469999999999999999999998 66788887766543210
Q ss_pred EEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee----EEecCCCCcEEEEE
Q psy2671 181 VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL----FKCEGHKHWVLCIA 256 (573)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~----~~~~~h~~~V~~v~ 256 (573)
......+|...|.+++|+|+++ +++++.|++|+|||+.+++.. ....+|...|.+++
T Consensus 86 ------------------~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~ 146 (357)
T 4g56_B 86 ------------------LCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLS 146 (357)
T ss_dssp ------------------GCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEE
T ss_pred ------------------EecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEE
Confidence 0011236888999999999986 556789999999999887643 34458999999999
Q ss_pred EcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec
Q psy2671 257 WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT 336 (573)
Q Consensus 257 ~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 336 (573)
|+|++++|++|+.|+.|++||+++++.+ ..+.+|...|.+++|.|. ....+++++.||+|++||+.++++...+.
T Consensus 147 ~spdg~~l~sgs~dg~v~iwd~~~~~~~-~~~~~h~~~v~~v~~s~~----~~~~~~s~~~dg~v~~wd~~~~~~~~~~~ 221 (357)
T 4g56_B 147 VFSDGTQAVSGGKDFSVKVWDLSQKAVL-KSYNAHSSEVNCVAACPG----KDTIFLSCGEDGRILLWDTRKPKPATRID 221 (357)
T ss_dssp ECSSSSEEEEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECTT----CSSCEEEEETTSCEEECCTTSSSCBCBCC
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCCcEE-EEEcCCCCCEEEEEEccC----CCceeeeeccCCceEEEECCCCceeeeee
Confidence 9999999999999999999999988765 456889999999999763 22478999999999999999887665543
Q ss_pred --CCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCch
Q psy2671 337 --SHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE 412 (573)
Q Consensus 337 --~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 412 (573)
.|...+.+++|++++ .+++|+.|+.|++||++
T Consensus 222 ~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~-------------------------------------------- 257 (357)
T 4g56_B 222 FCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK-------------------------------------------- 257 (357)
T ss_dssp CTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS--------------------------------------------
T ss_pred eccccccccchhhhhcccceEEEeecccceeEEECC--------------------------------------------
Confidence 456667777776542 34455555555555543
Q ss_pred hhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC-CEEEEeeCCCcEEEEeCCC
Q psy2671 413 ESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG-RIIASASFDKSIKLWDGRI 491 (573)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~las~s~dg~i~lwd~~~ 491 (573)
+. .....+.+|...|++++|+|++ ++||+|+.||+|+|||.++
T Consensus 258 -----------------------------------~~-~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 258 -----------------------------------NP-DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp -----------------------------------CG-GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred -----------------------------------CC-cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence 32 2234556778889999999987 5799999999999999999
Q ss_pred CeEEEeecCCcceEEEEEECC-CCCEEEEEeCCCcEEEEeCCccc
Q psy2671 492 GKFITTLRGHVQAVYMVAWSS-DSRLLVSGSADSTLKVWNMKTKK 535 (573)
Q Consensus 492 ~~~~~~~~~h~~~v~~v~~s~-dg~~las~s~D~~v~vwd~~~~~ 535 (573)
++.+..+ +|...|++++|+| |+++||++|.|++|++|++.+..
T Consensus 302 ~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 302 SEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp CEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred CcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 9877655 7999999999998 89999999999999999996643
No 29
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.2e-44 Score=398.56 Aligned_cols=365 Identities=21% Similarity=0.325 Sum_probs=307.1
Q ss_pred ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183 (573)
Q Consensus 104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (573)
..+.+|.++|.+++|||++++||+|+.||+|+|||+.++.++.
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~------------------------------------- 49 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVR------------------------------------- 49 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-------------------------------------
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEE-------------------------------------
Confidence 3567899999999999999999999999999999998775432
Q ss_pred EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe
Q psy2671 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ 263 (573)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~ 263 (573)
.+.+|.++|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++
T Consensus 50 ------------------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 111 (814)
T 3mkq_A 50 ------------------SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY 111 (814)
T ss_dssp ------------------EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred ------------------EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCE
Confidence 23478999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC-ccE
Q psy2671 264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT-RSV 342 (573)
Q Consensus 264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~-~~v 342 (573)
|++++.||.|++||+.++......+.+|...|.+++|.|. ++..+++++.||+|++||+..+.....+..+. ..+
T Consensus 112 l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v 187 (814)
T 3mkq_A 112 VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK----DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV 187 (814)
T ss_dssp EEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETT----EEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCC
T ss_pred EEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcC----CCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCE
Confidence 9999999999999998875555677889999999999872 34689999999999999998877766665544 889
Q ss_pred EEEEECC--Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671 343 TCIRWGG--SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL 419 (573)
Q Consensus 343 ~~~~~~~--~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (573)
.+++|++ ++ .+++++.|+.|++||..++.....+.+|...+..++++
T Consensus 188 ~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~------------------------------ 237 (814)
T 3mkq_A 188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH------------------------------ 237 (814)
T ss_dssp CEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEEC------------------------------
T ss_pred EEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc------------------------------
Confidence 9999987 55 79999999999999999999999999998888888776
Q ss_pred hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCC--EEEEeeCCCcEEEEeCCCCe----
Q psy2671 420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR--IIASASFDKSIKLWDGRIGK---- 493 (573)
Q Consensus 420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~--~las~s~dg~i~lwd~~~~~---- 493 (573)
|++.++++++.||.|++||+.+.. ....+..|...+.+++|+|+|. ++++++ |+.+.+|+...+.
T Consensus 238 -------~~~~~l~~~~~dg~v~vwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 308 (814)
T 3mkq_A 238 -------PTLPIIISGSEDGTLKIWNSSTYK-VEKTLNVGLERSWCIATHPTGRKNYIASGF-DNGFTVLSLGNDEPTLS 308 (814)
T ss_dssp -------SSSSEEEEEETTSCEEEEETTTCS-EEEEECCSSSSEEEEEECTTCGGGEEEEEE-TTEEEEEECSCCSCCEE
T ss_pred -------CCCCEEEEEeCCCeEEEEECCCCc-EEEEeecCCCcEEEEEEccCCCceEEEEEe-CCCEEEEEcCCCCceeE
Confidence 557899999999999999987653 4566777888999999999987 455554 6678888765322
Q ss_pred ------EEE---------------------------------eecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671 494 ------FIT---------------------------------TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534 (573)
Q Consensus 494 ------~~~---------------------------------~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~ 534 (573)
.+. .+..+...+.+++|+|+|++|++++ |+.+.+|++...
T Consensus 309 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~ 387 (814)
T 3mkq_A 309 LDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAW 387 (814)
T ss_dssp ECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTT
T ss_pred ECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECccc
Confidence 111 1122334578899999999999998 899999997543
Q ss_pred cccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 535 KIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 535 ~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
.. .+.+.+.+++|+||+++|++++.|+.|++|+
T Consensus 388 ~~-----~~~~~i~~~~~spdg~~la~~~~~g~v~l~~ 420 (814)
T 3mkq_A 388 RN-----KAFGKCQDFVWGPDSNSYALIDETGQIKYYK 420 (814)
T ss_dssp EE-----EEEEECSEEEECTTSSCEEEECTTCCEEEEE
T ss_pred cc-----cCCCceEEEEEeCCCCeEEEEeCCCcEEEEE
Confidence 22 2345677889999999999999999999885
No 30
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-44 Score=363.28 Aligned_cols=338 Identities=18% Similarity=0.309 Sum_probs=279.9
Q ss_pred ccccEEEEEEcCCCC-eeEEeeCCCcEEEeec----cCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671 109 HAEAVISVKFSPNGR-SLASGSGDTTVRFWDV----TTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183 (573)
Q Consensus 109 H~~~V~~l~~s~~~~-~lat~s~D~~vrvWd~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (573)
|.++|.+++|+|+++ +||+|+.|++|+|||+ .+++++++....
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-------------------------------- 91 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTII-------------------------------- 91 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEE--------------------------------
T ss_pred ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccc--------------------------------
Confidence 669999999999999 9999999999999999 777643221000
Q ss_pred EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe
Q psy2671 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ 263 (573)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~ 263 (573)
..+...........+|.+.|.+++|+|++++|++|+.|+.|++|| .++..+..+.+|...|.+++|+|++++
T Consensus 92 -------~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~ 163 (425)
T 1r5m_A 92 -------AELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTH 163 (425)
T ss_dssp -------EEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSE
T ss_pred -------ccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCE
Confidence 000000000112345788999999999999999999999999999 667788889999999999999999999
Q ss_pred EEEEeeCCeEEEEECCCCceecccccCCccc---------------EEEEEecccccCCCCCEEEEEeCCCcEEEEECCC
Q psy2671 264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQW---------------ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328 (573)
Q Consensus 264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~---------------v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 328 (573)
|++++.|+.|++||+.+++.+. .+..+... +.++.|.| ...+++++.+|.|++||+..
T Consensus 164 l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~i~~~d~~~ 236 (425)
T 1r5m_A 164 IISMDVENVTILWNVISGTVMQ-HFELKETGGSSINAENHSGDGSLGVDVEWVD------DDKFVIPGPKGAIFVYQITE 236 (425)
T ss_dssp EEEEETTCCEEEEETTTTEEEE-EECCC---------------CCCBSCCEEEE------TTEEEEECGGGCEEEEETTC
T ss_pred EEEEecCCeEEEEECCCCcEEE-EeeccccCccceeeccccCCcceeeEEEEcC------CCEEEEEcCCCeEEEEEcCC
Confidence 9999999999999999887653 33444443 66777765 24689999999999999999
Q ss_pred CeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeC
Q psy2671 329 SQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407 (573)
Q Consensus 329 ~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~ 407 (573)
++....+..|...|.+++|++++ .+++++.|+.|++|+++++.....+.+|...+..++++
T Consensus 237 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~------------------ 298 (425)
T 1r5m_A 237 KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWV------------------ 298 (425)
T ss_dssp SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEE------------------
T ss_pred CceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEEC------------------
Confidence 98888899999999999999876 79999999999999999998888888898888888776
Q ss_pred CCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEE
Q psy2671 408 PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487 (573)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lw 487 (573)
|++ .+++++.|+.|++||+.+.. .+..+..|...|.+++|+|++++|++++.||.|++|
T Consensus 299 -------------------~~~-~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~ 357 (425)
T 1r5m_A 299 -------------------GDD-KVISCSMDGSVRLWSLKQNT-LLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVY 357 (425)
T ss_dssp -------------------TTT-EEEEEETTSEEEEEETTTTE-EEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred -------------------CCC-EEEEEeCCCcEEEEECCCCc-EeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEE
Confidence 345 89999999999999997654 456677888999999999999999999999999999
Q ss_pred eCCCCe--------------------EEEeecCCcc--eEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671 488 DGRIGK--------------------FITTLRGHVQ--AVYMVAWSSDSRLLVSGSADSTLKVWNMK 532 (573)
Q Consensus 488 d~~~~~--------------------~~~~~~~h~~--~v~~v~~s~dg~~las~s~D~~v~vwd~~ 532 (573)
|.++++ .+..+.+|.. .|++++|+|++++|++++.|+.|++|+++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 358 DLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred ECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 999888 8899999976 99999999999999999999999999985
No 31
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.1e-43 Score=345.52 Aligned_cols=290 Identities=27% Similarity=0.457 Sum_probs=244.7
Q ss_pred cCCCCCCCcEEEEEEcCCC-CeEEEEeCCCeEEEEECCC-----CeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEE
Q psy2671 201 SSMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTT-----QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH 274 (573)
Q Consensus 201 ~~~~gh~~~V~~~~fsp~g-~~las~s~d~~i~iwd~~~-----~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~ 274 (573)
.++.||.+.|.+++|+|++ ++|++|+.|++|++|++.+ +.++..+.+|...|.+++|+|+|++|++|+.|++|+
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~ 90 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLR 90 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEE
Confidence 4578999999999999965 8999999999999999864 345677899999999999999999999999999999
Q ss_pred EEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEE
Q psy2671 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY 354 (573)
Q Consensus 275 vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~ 354 (573)
+||+.+++.+ ..+.+|...|.++.|.| ++.++++++.|++|++||+. ++++..+.+|...|.++.+.+....
T Consensus 91 ~wd~~~~~~~-~~~~~h~~~v~~~~~~~-----~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~- 162 (319)
T 3frx_A 91 LWDVATGETY-QRFVGHKSDVMSVDIDK-----KASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKA- 162 (319)
T ss_dssp EEETTTTEEE-EEEECCSSCEEEEEECT-----TSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC----
T ss_pred EEECCCCCee-EEEccCCCcEEEEEEcC-----CCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCC-
Confidence 9999998765 45779999999999876 56789999999999999986 5577788899999999988764210
Q ss_pred EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE
Q psy2671 355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS 434 (573)
Q Consensus 355 s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 434 (573)
.+++..+++
T Consensus 163 -----------------------------------------------------------------------~~~~~~l~s 171 (319)
T 3frx_A 163 -----------------------------------------------------------------------DDDSVTIIS 171 (319)
T ss_dssp --------------------------------------------------------------------------CCEEEE
T ss_pred -----------------------------------------------------------------------CCCccEEEE
Confidence 012446677
Q ss_pred EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCC
Q psy2671 435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS 514 (573)
Q Consensus 435 g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg 514 (573)
++.|++|++||+++.. ....+.+|...|.+++|+|+|++|++|+.||+|++||.++++.+..+..+ ..|.+++|+|++
T Consensus 172 ~~~d~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~ 249 (319)
T 3frx_A 172 AGNDKMVKAWNLNQFQ-IEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNR 249 (319)
T ss_dssp EETTSCEEEEETTTTE-EEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSS
T ss_pred EeCCCEEEEEECCcch-hheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCC
Confidence 7777777777766532 34556789999999999999999999999999999999999999888765 679999999999
Q ss_pred CEEEEEeCCCcEEEEeCCcccccccc--------cCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 515 RLLVSGSADSTLKVWNMKTKKIEQDL--------PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 515 ~~las~s~D~~v~vwd~~~~~~~~~l--------~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
.+|++++.+ .+++|++..+.....+ ..|...+.+++|+|||++|++|+.|++|++|+
T Consensus 250 ~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 250 YWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314 (319)
T ss_dssp SEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEE
Confidence 999988755 5999999876654433 24567899999999999999999999999997
No 32
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-44 Score=348.61 Aligned_cols=300 Identities=25% Similarity=0.415 Sum_probs=232.0
Q ss_pred cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD 182 (573)
Q Consensus 103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (573)
...|.+|.++|++++|+|+ +||||+.|++|+|||+.++.....
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~----------------------------------- 49 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLI----------------------------------- 49 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEE-----------------------------------
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEE-----------------------------------
Confidence 3467799999999999987 999999999999999876421000
Q ss_pred EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC-------CeeeEEecCCCCcEEEE
Q psy2671 183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-------QTPLFKCEGHKHWVLCI 255 (573)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~-------~~~~~~~~~h~~~V~~v 255 (573)
. .....+|.+.|.+++|+|++++||+|+.|++|+|||+.. ...+..+.+|...|.++
T Consensus 50 ---------~-------~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v 113 (330)
T 2hes_X 50 ---------D-------VLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGV 113 (330)
T ss_dssp ---------E-------EECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEE
T ss_pred ---------E-------EEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEE
Confidence 0 001124999999999999999999999999999999853 34567788999999999
Q ss_pred EEcCCCCeEEEEeeCCeEEEEECCCC-c--eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC--e
Q psy2671 256 AWSPDSKQLVSGCKNGVIHAWDSSTG-K--QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS--Q 330 (573)
Q Consensus 256 ~~s~dg~~l~sgs~dg~i~vwd~~~~-~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~ 330 (573)
+|+|+|++|++|+.|++|++||+... . .....+.+|...|.++.|.| ++++|++++.|++|++||...+ +
T Consensus 114 ~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p-----~~~~l~s~s~D~~i~iW~~~~~~~~ 188 (330)
T 2hes_X 114 AWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP-----SEALLASSSYDDTVRIWKDYDDDWE 188 (330)
T ss_dssp EECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS-----SSSEEEEEETTSCEEEEEEETTEEE
T ss_pred EECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC-----CCCEEEEEcCCCeEEEEECCCCCee
Confidence 99999999999999999999999533 2 22245678999999999987 5679999999999999998766 5
Q ss_pred EEEEecCCCccEEEEEECCC--c-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeC
Q psy2671 331 CVRVLTSHTRSVTCIRWGGS--G-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407 (573)
Q Consensus 331 ~~~~~~~h~~~v~~~~~~~~--~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~ 407 (573)
++..+.+|...|.+++|+++ + .+++++.|++|++|++..+...
T Consensus 189 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~---------------------------------- 234 (330)
T 2hes_X 189 CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDED---------------------------------- 234 (330)
T ss_dssp EEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTT----------------------------------
T ss_pred EEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcc----------------------------------
Confidence 77888999999999999886 4 6889999999999986432100
Q ss_pred CCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc-ccccEEEEEECCCCCEEEEeeCCCcEEE
Q psy2671 408 PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG-HQQLINCVEFSPDGRIIASASFDKSIKL 486 (573)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~-h~~~v~~v~~sp~g~~las~s~dg~i~l 486 (573)
+. ..| .....+.+ |...|.+++|++++ +|++++.||+|++
T Consensus 235 ---------------------~~-----------~~~------~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~i 275 (330)
T 2hes_X 235 ---------------------DQ-----------QEW------VCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAV 275 (330)
T ss_dssp ---------------------SC-----------EEE------EEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEE
T ss_pred ---------------------cc-----------cee------EEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEE
Confidence 00 000 01112223 78889999999765 8999999999999
Q ss_pred EeCCCCe--EEE-eecCCcc-eEEEEEECC--CCCEEEEEeCCCcEEEEeCCc
Q psy2671 487 WDGRIGK--FIT-TLRGHVQ-AVYMVAWSS--DSRLLVSGSADSTLKVWNMKT 533 (573)
Q Consensus 487 wd~~~~~--~~~-~~~~h~~-~v~~v~~s~--dg~~las~s~D~~v~vwd~~~ 533 (573)
||..+++ .+. .+.+|.. .|++++|+| ++++||+|+.|++|++|+++.
T Consensus 276 w~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 276 YEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 9988774 333 3467877 899999999 789999999999999999864
No 33
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.8e-43 Score=341.89 Aligned_cols=287 Identities=34% Similarity=0.642 Sum_probs=251.1
Q ss_pred cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280 (573)
Q Consensus 201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~ 280 (573)
.++.||.+.|.+++|+|++++|++|+.|+.|++|++.+++....+.+|...|.+++|+|++++|++|+.|+.|++||+++
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC
Confidence 45679999999999999999999999999999999999998889999999999999999999999999999999999998
Q ss_pred CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCC
Q psy2671 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQD 359 (573)
Q Consensus 281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d 359 (573)
++.+ ..+.+|...|.++.|.| +++.+++++.|+.|++||+.+++++..+..|...|.+++|++++ .+++++.|
T Consensus 97 ~~~~-~~~~~~~~~v~~~~~~~-----~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 97 GKCL-KTLKGHSNYVFCCNFNP-----QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp CCEE-EEEECCSSCEEEEEECS-----SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CcEE-EEEcCCCCCEEEEEEcC-----CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 8765 45678999999999877 56789999999999999999999988999999999999988765 67777778
Q ss_pred CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671 360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF 439 (573)
Q Consensus 360 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 439 (573)
+.|++||++++.....
T Consensus 171 ~~i~~wd~~~~~~~~~---------------------------------------------------------------- 186 (312)
T 4ery_A 171 GLCRIWDTASGQCLKT---------------------------------------------------------------- 186 (312)
T ss_dssp SCEEEEETTTCCEEEE----------------------------------------------------------------
T ss_pred CcEEEEECCCCceeeE----------------------------------------------------------------
Confidence 8888887765432211
Q ss_pred eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEE---EEEECCCCCE
Q psy2671 440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY---MVAWSSDSRL 516 (573)
Q Consensus 440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~---~v~~s~dg~~ 516 (573)
....+...+.+++|+|++++|++++.||.|++||.++++.+..+.+|..... .....+++.+
T Consensus 187 ---------------~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 187 ---------------LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW 251 (312)
T ss_dssp ---------------ECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCE
T ss_pred ---------------EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcE
Confidence 1123345688999999999999999999999999999999999988865432 2334478899
Q ss_pred EEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEee--CCCcEEEcc
Q psy2671 517 LVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQ 572 (573)
Q Consensus 517 las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~--~d~~i~iw~ 572 (573)
|++|+.|+.|++||+.+++.+..+.+|.+.|.+++|+|+++.|++++ .|++|++|+
T Consensus 252 l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~ 309 (312)
T 4ery_A 252 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 309 (312)
T ss_dssp EEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEE
T ss_pred EEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEec
Confidence 99999999999999999999999999999999999999999999987 699999997
No 34
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.7e-43 Score=338.77 Aligned_cols=293 Identities=30% Similarity=0.543 Sum_probs=251.1
Q ss_pred ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV 181 (573)
Q Consensus 102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (573)
....+.||.+.|++++|+|++++||+|+.|++|+|||..+++..
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~------------------------------------ 58 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE------------------------------------ 58 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE------------------------------------
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccc------------------------------------
Confidence 34567899999999999999999999999999999998776432
Q ss_pred EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCC
Q psy2671 182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261 (573)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg 261 (573)
..+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++
T Consensus 59 -------------------~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 119 (312)
T 4ery_A 59 -------------------KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS 119 (312)
T ss_dssp -------------------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred -------------------hhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 1245799999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCc
Q psy2671 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-TSHTR 340 (573)
Q Consensus 262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~h~~ 340 (573)
++|++|+.|+.|++||+++++.+ ..+.+|...|.++.|.| +++.+++++.||.|++||+.+++.+..+ ..+..
T Consensus 120 ~~l~s~~~d~~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 193 (312)
T 4ery_A 120 NLIVSGSFDESVRIWDVKTGKCL-KTLPAHSDPVSAVHFNR-----DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 193 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEE-EEECCCSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTTCCEEEEECCSSCC
T ss_pred CEEEEEeCCCcEEEEECCCCEEE-EEecCCCCcEEEEEEcC-----CCCEEEEEeCCCcEEEEECCCCceeeEEeccCCC
Confidence 99999999999999999988765 45678999999999876 5678999999999999999998877665 45667
Q ss_pred cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671 341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL 419 (573)
Q Consensus 341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (573)
.+.+++|++++ .+++++.|+.|++||++++.....+.+|....
T Consensus 194 ~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~------------------------------------ 237 (312)
T 4ery_A 194 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK------------------------------------ 237 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSS------------------------------------
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCce------------------------------------
Confidence 89999998876 68888899999999988776655544432110
Q ss_pred hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671 420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR 499 (573)
Q Consensus 420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~ 499 (573)
..+......+++.+|++|+.||.|++||.++++.+..+.
T Consensus 238 -----------------------------------------~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 276 (312)
T 4ery_A 238 -----------------------------------------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 276 (312)
T ss_dssp -----------------------------------------SCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEEC
T ss_pred -----------------------------------------EEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhh
Confidence 001122234678899999999999999999999999999
Q ss_pred CCcceEEEEEECCCCCEEEEEe--CCCcEEEEeCC
Q psy2671 500 GHVQAVYMVAWSSDSRLLVSGS--ADSTLKVWNMK 532 (573)
Q Consensus 500 ~h~~~v~~v~~s~dg~~las~s--~D~~v~vwd~~ 532 (573)
+|...|.+++|+|++++|++++ .|++|++|+..
T Consensus 277 ~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 277 GHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred ccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 9999999999999999999987 69999999864
No 35
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.3e-42 Score=341.36 Aligned_cols=298 Identities=26% Similarity=0.457 Sum_probs=248.7
Q ss_pred cccCCCccccEEEEEEcCC-CCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671 103 TSSMPGHAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV 181 (573)
Q Consensus 103 ~~~~~gH~~~V~~l~~s~~-~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (573)
..+|.||.++|++|+|+|+ +++|||||.|++|||||+.++.....
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~---------------------------------- 76 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG---------------------------------- 76 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSE----------------------------------
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc----------------------------------
Confidence 4568899999999999998 68999999999999999976542210
Q ss_pred EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCC
Q psy2671 182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261 (573)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg 261 (573)
.+...+.||...|.+++|+|+|++|++|+.|+.|++|+............+...+..+.+++++
T Consensus 77 ----------------~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (340)
T 4aow_A 77 ----------------IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 140 (340)
T ss_dssp ----------------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred ----------------eeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecC
Confidence 0113456899999999999999999999999999999999998888888888999999999999
Q ss_pred CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc
Q psy2671 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341 (573)
Q Consensus 262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~ 341 (573)
.+|++|+.|+.+++||............+|...+..+.|.+. .....+++++.|+.|++||+..++....+.+|...
T Consensus 141 ~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~ 217 (340)
T 4aow_A 141 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN---SSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 217 (340)
T ss_dssp SCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC---SSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred ccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccC---CCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCc
Confidence 999999999999999998776665667789999999998763 23457899999999999999999999999999999
Q ss_pred EEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671 342 VTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA 420 (573)
Q Consensus 342 v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (573)
|.+++|++++ .+++|+.|++|++||++++..+..
T Consensus 218 v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~--------------------------------------------- 252 (340)
T 4aow_A 218 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT--------------------------------------------- 252 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE---------------------------------------------
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEeccCceeee---------------------------------------------
Confidence 9999998775 677788888888887765433211
Q ss_pred heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee--
Q psy2671 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL-- 498 (573)
Q Consensus 421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~-- 498 (573)
+. +...|.++.|+|++.++ +++.|+.|++||.+++..+..+
T Consensus 253 -----------------------------------~~-~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~ 295 (340)
T 4aow_A 253 -----------------------------------LD-GGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQ 295 (340)
T ss_dssp -----------------------------------EE-CSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECC
T ss_pred -----------------------------------ec-CCceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccc
Confidence 11 23458889999987655 4556999999999888766554
Q ss_pred -------cCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc
Q psy2671 499 -------RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535 (573)
Q Consensus 499 -------~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~ 535 (573)
.+|...|++++|+|||++||+|+.||.|+|||+++|+
T Consensus 296 ~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 296 EVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp C-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred cceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 3688899999999999999999999999999998875
No 36
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.7e-43 Score=352.22 Aligned_cols=314 Identities=26% Similarity=0.454 Sum_probs=250.2
Q ss_pred CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK 187 (573)
Q Consensus 108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
+|.+.|.+++|+|||++||+|+ |++++||++.+++.+.......... . .
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~-------------------~----------~- 110 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAAN-------------------K----------D- 110 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-------------------------------------
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccc-------------------c----------c-
Confidence 5999999999999999999987 7899999999887654432210000 0 0
Q ss_pred eeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE
Q psy2671 188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG 267 (573)
Q Consensus 188 ~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg 267 (573)
+..........+...|.+++|+|+|++||+|+.|++|+|||+.+++.+..+.+|...|.+++|+|++++|++|
T Consensus 111 -------~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 183 (393)
T 1erj_A 111 -------PENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSG 183 (393)
T ss_dssp -----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred -------cccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEe
Confidence 0000001123455679999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-------cCCCc
Q psy2671 268 CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-------TSHTR 340 (573)
Q Consensus 268 s~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-------~~h~~ 340 (573)
+.|++|++||+++++.... ..+...+.+++|.| .+++++++++.||.|++||+.++..+..+ .+|..
T Consensus 184 s~d~~v~iwd~~~~~~~~~--~~~~~~v~~~~~~~----~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~ 257 (393)
T 1erj_A 184 SGDRTVRIWDLRTGQCSLT--LSIEDGVTTVAVSP----GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD 257 (393)
T ss_dssp ETTSEEEEEETTTTEEEEE--EECSSCEEEEEECS----TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSS
T ss_pred cCCCcEEEEECCCCeeEEE--EEcCCCcEEEEEEC----CCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCC
Confidence 9999999999998876432 23556788888876 25689999999999999999988877666 57999
Q ss_pred cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671 341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL 419 (573)
Q Consensus 341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (573)
.|.+++|++++ .+++|+.|++|++||+++........
T Consensus 258 ~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~------------------------------------------ 295 (393)
T 1erj_A 258 SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK------------------------------------------ 295 (393)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEC----------------------------------------------------
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccccc------------------------------------------
Confidence 99999999887 79999999999999986542210000
Q ss_pred hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671 420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR 499 (573)
Q Consensus 420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~ 499 (573)
..........+.+|...|.+++|+|++++|++|+.||.|++||.++++.+..+.
T Consensus 296 --------------------------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~ 349 (393)
T 1erj_A 296 --------------------------TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 349 (393)
T ss_dssp -------------------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred --------------------------CCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC
Confidence 000011233456788999999999999999999999999999999999999999
Q ss_pred CCcceEEEEEECC------CCCEEEEEeCCCcEEEEeCCc
Q psy2671 500 GHVQAVYMVAWSS------DSRLLVSGSADSTLKVWNMKT 533 (573)
Q Consensus 500 ~h~~~v~~v~~s~------dg~~las~s~D~~v~vwd~~~ 533 (573)
+|...|.+++|++ ++++||+|+.|++|++|++..
T Consensus 350 ~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 350 GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred CCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 9999999999986 688999999999999999854
No 37
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.3e-43 Score=343.52 Aligned_cols=294 Identities=23% Similarity=0.395 Sum_probs=238.9
Q ss_pred cCCCCCCCcEEEEEE-----cC-CCCeEEEEeCCCeEEEEECCCC-------eeeEEecCCCCcEEEEEEcCCCCeEEEE
Q psy2671 201 SSMPGHAEAVISVKF-----SP-NGRSLASGSGDTTVRFWDVTTQ-------TPLFKCEGHKHWVLCIAWSPDSKQLVSG 267 (573)
Q Consensus 201 ~~~~gh~~~V~~~~f-----sp-~g~~las~s~d~~i~iwd~~~~-------~~~~~~~~h~~~V~~v~~s~dg~~l~sg 267 (573)
..+.||.+.|++++| +| ++++|++|+.|++|++||+.+. .+...+.+|...|.+++|+|++.+|++|
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~ 94 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISS 94 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEE
Confidence 457799999999999 77 8999999999999999998753 4566789999999999999999999999
Q ss_pred eeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe--cCCCccEEEE
Q psy2671 268 CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL--TSHTRSVTCI 345 (573)
Q Consensus 268 s~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~--~~h~~~v~~~ 345 (573)
+.|++|++||+++++.+ ..+.+|...|.+++|.| +++++++++.|++|++||+......... ..|...|.++
T Consensus 95 s~D~~v~lwd~~~~~~~-~~~~~h~~~v~~v~~sp-----~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 95 SWDKTLRLWDLRTGTTY-KRFVGHQSEVYSVAFSP-----DNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCV 168 (343)
T ss_dssp ETTSEEEEEETTSSCEE-EEEECCCSCEEEEEECS-----STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEE
T ss_pred cCCCcEEEEECCCCcEE-EEEcCCCCcEEEEEECC-----CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeee
Confidence 99999999999998765 45678999999999987 5689999999999999998743322211 2566777777
Q ss_pred EECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671 346 RWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ 425 (573)
Q Consensus 346 ~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (573)
+|++.+.. ....
T Consensus 169 ~~~~~~~~--------------------------------------------------------------------~~~~ 180 (343)
T 2xzm_R 169 RYSPIMKS--------------------------------------------------------------------ANKV 180 (343)
T ss_dssp EECCCCCS--------------------------------------------------------------------CSCC
T ss_pred eecccccc--------------------------------------------------------------------cccc
Confidence 77654210 0001
Q ss_pred CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCC-CeEEEeecCCcce
Q psy2671 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI-GKFITTLRGHVQA 504 (573)
Q Consensus 426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~-~~~~~~~~~h~~~ 504 (573)
.|.+.++++++.|++|++||.. ......+.+|...|.+++|+|+|++|++|+.||.|++||+.. ......+. +...
T Consensus 181 ~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~ 257 (343)
T 2xzm_R 181 QPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGST 257 (343)
T ss_dssp CSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSC
T ss_pred CCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCCc
Confidence 2456789999999999999943 334556788999999999999999999999999999999854 33333332 3456
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEeCCcccccc--ccc-----------CcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ--DLP-----------GHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571 (573)
Q Consensus 505 v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~--~l~-----------~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw 571 (573)
|.+++|+|++++++++ .|+.|++|++.+++... .+. +|...|++++|+|++++|++|+.||+|++|
T Consensus 258 v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w 336 (343)
T 2xzm_R 258 INQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTF 336 (343)
T ss_dssp EEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEE
T ss_pred EEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEE
Confidence 9999999999888755 58889999998765433 332 788899999999999999999999999999
Q ss_pred c
Q psy2671 572 Q 572 (573)
Q Consensus 572 ~ 572 (573)
+
T Consensus 337 ~ 337 (343)
T 2xzm_R 337 S 337 (343)
T ss_dssp E
T ss_pred E
Confidence 6
No 38
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9.1e-44 Score=391.47 Aligned_cols=393 Identities=19% Similarity=0.283 Sum_probs=320.8
Q ss_pred cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD 182 (573)
Q Consensus 103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (573)
...+.+|..+|.+++|+|++++||+|+.||+|+|||+.+++++.
T Consensus 48 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~------------------------------------ 91 (814)
T 3mkq_A 48 VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV------------------------------------ 91 (814)
T ss_dssp EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE------------------------------------
T ss_pred EEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE------------------------------------
Confidence 34566899999999999999999999999999999998875432
Q ss_pred EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC-eeeEEecCCCCcEEEEEEcC-C
Q psy2671 183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ-TPLFKCEGHKHWVLCIAWSP-D 260 (573)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~-~~~~~~~~h~~~V~~v~~s~-d 260 (573)
.+.+|.+.|.+++|+|++++|++++.|++|++||+.++ .....+.+|...|.+++|+| +
T Consensus 92 -------------------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 152 (814)
T 3mkq_A 92 -------------------DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKD 152 (814)
T ss_dssp -------------------EEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTE
T ss_pred -------------------EEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCC
Confidence 23479999999999999999999999999999999886 66677889999999999999 8
Q ss_pred CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc
Q psy2671 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR 340 (573)
Q Consensus 261 g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~ 340 (573)
+..|++++.||.|++||+.++.........+...+..++|.|. +++..+++++.||.|++||+.++++...+.+|..
T Consensus 153 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 229 (814)
T 3mkq_A 153 PSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL---PDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS 229 (814)
T ss_dssp EEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCS---TTCCEEEEECTTSEEEEEETTTTEEEEEEECCSS
T ss_pred CCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEEC---CCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 8999999999999999998876654444455578899998773 3567999999999999999999999999999999
Q ss_pred cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCce--eEEEEcCCCceeeCC---------
Q psy2671 341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYL--MRVEATSTGGFKYDP--------- 408 (573)
Q Consensus 341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~~~~~~~~~~~~~~~--------- 408 (573)
.|.+++|++++ .+++++.||.|++|+..++.....+..|...+..++++++.. ..+.....+...+..
T Consensus 230 ~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (814)
T 3mkq_A 230 NVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSL 309 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEE
T ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEE
Confidence 99999999887 799999999999999999999999999999999999988753 222222221111110
Q ss_pred --CCch-------h-----------------------------hhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc
Q psy2671 409 --ANPE-------E-----------------------------SSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK 450 (573)
Q Consensus 409 --~~~~-------~-----------------------------~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~ 450 (573)
.... . ............+|+|.++++++ ++.+.+|+.....
T Consensus 310 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~ 388 (814)
T 3mkq_A 310 DPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWR 388 (814)
T ss_dssp CSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTE
T ss_pred CCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECcccc
Confidence 0000 0 00000112334578999999998 8999999975432
Q ss_pred cceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCC---CEEEEEeCCCcEE
Q psy2671 451 KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS---RLLVSGSADSTLK 527 (573)
Q Consensus 451 ~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg---~~las~s~D~~v~ 527 (573)
. .+...+.+++|+|+|+++|+++.+|.|++|+ .+.+|...+.+++|+|+| .+|++++.|++|+
T Consensus 389 ~------~~~~~i~~~~~spdg~~la~~~~~g~v~l~~--------~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~ 454 (814)
T 3mkq_A 389 N------KAFGKCQDFVWGPDSNSYALIDETGQIKYYK--------NFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVY 454 (814)
T ss_dssp E------EEEEECSEEEECTTSSCEEEECTTCCEEEEE--------TTEECTTCCCCCSSCCCEEECSSSEEEEETTEEE
T ss_pred c------cCCCceEEEEEeCCCCeEEEEeCCCcEEEEE--------CCCCccceEEcCCcCccceecceEEEEecCCEEE
Confidence 1 2345688999999999999999999999996 334577788899999998 6888999999999
Q ss_pred EEeCCcccccccccCcCCCEEEEEEccCCCEEEEe------eCCCcEEEc
Q psy2671 528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASG------GKDKVLRLW 571 (573)
Q Consensus 528 vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~------~~d~~i~iw 571 (573)
+||+.+++.+..+.+|.. .+.|+|||++|+++ +.++...+|
T Consensus 455 ~~d~~~~~~~~~~~~~~~---~v~~s~dg~~la~~~~~~~~~~~~~~~~~ 501 (814)
T 3mkq_A 455 FFDWDNGTLVRRIDVNAK---DVIWSDNGELVMIVNTNSNGDEASGYTLL 501 (814)
T ss_dssp EECTTTCCEEEEESSCEE---EEEECTTSSEEEEEECCCSSCSCSEEEEE
T ss_pred EEECCcCcEEEEEecCCC---EEEEcCCCCEEEEEEcCcccCCceEEEEE
Confidence 999999999888887764 89999999999999 666666565
No 39
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-43 Score=343.04 Aligned_cols=286 Identities=26% Similarity=0.470 Sum_probs=225.4
Q ss_pred cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC--eeeEEe-cC-CCCcEEEEEEcCCCCeEEEEeeCCeEEEE
Q psy2671 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ--TPLFKC-EG-HKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276 (573)
Q Consensus 201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~--~~~~~~-~~-h~~~V~~v~~s~dg~~l~sgs~dg~i~vw 276 (573)
..+.+|.+.|++++|+|+ +||+|+.|++|++||+.++ +.+..+ .+ |...|.+++|+|++++|++|+.|++|++|
T Consensus 8 ~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw 85 (330)
T 2hes_X 8 KSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIW 85 (330)
T ss_dssp EEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 456799999999999998 9999999999999999875 344445 44 99999999999999999999999999999
Q ss_pred ECCCCc------eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC----CeEEEEecCCCccEEEEE
Q psy2671 277 DSSTGK------QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL----SQCVRVLTSHTRSVTCIR 346 (573)
Q Consensus 277 d~~~~~------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~h~~~v~~~~ 346 (573)
|++.+. .....+.+|...|.+++|.| ++++|++++.|++|++||+.. .+++..+.+|...|.+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-----~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 86 AKEESADRTFEMDLLAIIEGHENEVKGVAWSN-----DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp EC-------CCCEEEEEEC----CEEEEEECT-----TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred EcccCcCccccceeEEEEcCCCCcEEEEEECC-----CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 986431 12245679999999999987 578999999999999999943 245667788888888888
Q ss_pred ECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671 347 WGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ 425 (573)
Q Consensus 347 ~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (573)
|++++ .+++++.|++|++|+..++.
T Consensus 161 ~~p~~~~l~s~s~D~~i~iW~~~~~~------------------------------------------------------ 186 (330)
T 2hes_X 161 WHPSEALLASSSYDDTVRIWKDYDDD------------------------------------------------------ 186 (330)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTE------------------------------------------------------
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCC------------------------------------------------------
Confidence 87665 56677777777777643220
Q ss_pred CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCC--CCEEEEeeCCCcEEEEeCCCC--------eEE
Q psy2671 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD--GRIIASASFDKSIKLWDGRIG--------KFI 495 (573)
Q Consensus 426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~--g~~las~s~dg~i~lwd~~~~--------~~~ 495 (573)
...+..+.+|...|.+++|+|+ +.+|++|+.|++|++||.+.+ ...
T Consensus 187 ------------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 242 (330)
T 2hes_X 187 ------------------------WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCE 242 (330)
T ss_dssp ------------------------EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEE
T ss_pred ------------------------eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEe
Confidence 1223456688889999999998 779999999999999998654 345
Q ss_pred EeecC-CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc--cc-ccccCcCC-CEEEEEEcc--CCCEEEEeeCCCcE
Q psy2671 496 TTLRG-HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK--IE-QDLPGHGD-EVYAVDWAP--DGEKVASGGKDKVL 568 (573)
Q Consensus 496 ~~~~~-h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~--~~-~~l~~h~~-~v~~~~~s~--d~~~l~s~~~d~~i 568 (573)
..+.+ |...|++++|++++ +||+++.|++|++|+..+++ .. ..+.+|.. .|.+++|+| ++++|++||.|++|
T Consensus 243 ~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v 321 (330)
T 2hes_X 243 AILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIV 321 (330)
T ss_dssp EECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEE
T ss_pred eecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcE
Confidence 55655 89999999999765 89999999999999997763 22 33467887 899999999 78999999999999
Q ss_pred EEcc
Q psy2671 569 RLWQ 572 (573)
Q Consensus 569 ~iw~ 572 (573)
++|+
T Consensus 322 ~~W~ 325 (330)
T 2hes_X 322 NFWS 325 (330)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 40
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1e-43 Score=360.09 Aligned_cols=343 Identities=15% Similarity=0.181 Sum_probs=278.2
Q ss_pred cccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEecee
Q psy2671 110 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQA 189 (573)
Q Consensus 110 ~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (573)
.+.+++++|+|++++|++|+.|++|++||+.++...
T Consensus 56 ~~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~-------------------------------------------- 91 (420)
T 3vl1_A 56 VDAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGS-------------------------------------------- 91 (420)
T ss_dssp CBCCTTCEEEEEETTEEEEEETTEEEEEECCSEETT--------------------------------------------
T ss_pred cccccceeeeecCCeEEEEEcCCcEEEEEeccccee--------------------------------------------
Confidence 345568899999999999999999999998765432
Q ss_pred eEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee
Q psy2671 190 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269 (573)
Q Consensus 190 ~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~ 269 (573)
..+.+| ..+....|+|++++|++|+.|+.|++||+.+++....+.+|...|.+++|+|++++|++|+.
T Consensus 92 -----------~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 159 (420)
T 3vl1_A 92 -----------KMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ 159 (420)
T ss_dssp -----------TTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET
T ss_pred -----------eEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC
Confidence 223344 44556678999999999999999999999999888888899999999999999999999999
Q ss_pred CCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC---CCccEEEEE
Q psy2671 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS---HTRSVTCIR 346 (573)
Q Consensus 270 dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~---h~~~v~~~~ 346 (573)
|+.|++||+.+++.+ ..+.+|...|.+++|.| +++.|++++.||+|++||+.+++.+..+.. |...+.+++
T Consensus 160 d~~i~iwd~~~~~~~-~~~~~h~~~v~~~~~~~-----~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 233 (420)
T 3vl1_A 160 DMQLKIWSVKDGSNP-RTLIGHRATVTDIAIID-----RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIA 233 (420)
T ss_dssp TSEEEEEETTTCCCC-EEEECCSSCEEEEEEET-----TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEE
T ss_pred CCeEEEEeCCCCcCc-eEEcCCCCcEEEEEEcC-----CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEE
Confidence 999999999988765 35678999999999987 567899999999999999999998888764 455666666
Q ss_pred ECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeC
Q psy2671 347 WGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC 426 (573)
Q Consensus 347 ~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (573)
+.+.+ +.. ....+...+.. ..++
T Consensus 234 ~~~~~-------~~~-------------~~~~~~~~v~~-------------------------------------~~~s 256 (420)
T 3vl1_A 234 LFVGT-------DRQ-------------LHEISTSKKNN-------------------------------------LEFG 256 (420)
T ss_dssp EEECC-------CSS-------------CGGGCCCCCCT-------------------------------------TCSS
T ss_pred EecCC-------cce-------------eeecccCcccc-------------------------------------eEEc
Confidence 54321 000 00111111111 1234
Q ss_pred CCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEEeeCCCcEEEEeCCCCeE-EEeecC-Ccc
Q psy2671 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRIGKF-ITTLRG-HVQ 503 (573)
Q Consensus 427 ~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las~s~dg~i~lwd~~~~~~-~~~~~~-h~~ 503 (573)
|++.++++|+.||.|++||+++.........+|...|.+++|+|+++ +|++|+.||.|++||+++++. +..+.+ |..
T Consensus 257 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~ 336 (420)
T 3vl1_A 257 TYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGT 336 (420)
T ss_dssp CTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTS
T ss_pred CCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCC
Confidence 77899999999999999999887666566667889999999999999 999999999999999998754 666766 667
Q ss_pred eEEEEEECCCCCEEEEEeCCCcEEEEeCCccc---------ccccccCcCCCEEEEEEccCCC---EEEEeeCCCcEEEc
Q psy2671 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK---------IEQDLPGHGDEVYAVDWAPDGE---KVASGGKDKVLRLW 571 (573)
Q Consensus 504 ~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~---------~~~~l~~h~~~v~~~~~s~d~~---~l~s~~~d~~i~iw 571 (573)
.+.++.+ +++++|++++.|+.|++|++.... ....+.+|.+.|.+++|+|+++ .|+++|.+|.+++|
T Consensus 337 ~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~ 415 (420)
T 3vl1_A 337 PINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALY 415 (420)
T ss_dssp CEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEE
T ss_pred CceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEE
Confidence 7888855 578899999999999999987632 2234567888999999999999 78889999999999
Q ss_pred c
Q psy2671 572 Q 572 (573)
Q Consensus 572 ~ 572 (573)
+
T Consensus 416 ~ 416 (420)
T 3vl1_A 416 N 416 (420)
T ss_dssp E
T ss_pred e
Confidence 6
No 41
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1e-42 Score=348.93 Aligned_cols=287 Identities=30% Similarity=0.518 Sum_probs=242.3
Q ss_pred CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCC------------------cEEEEEEcCCCCeEEE
Q psy2671 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKH------------------WVLCIAWSPDSKQLVS 266 (573)
Q Consensus 205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~------------------~V~~v~~s~dg~~l~s 266 (573)
+|.+.|.+++|+|||++||+|+ |+++++|++.+++.+..+.+|.. .|.+++|+|||++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 5999999999999999999976 78999999999988777765532 4999999999999999
Q ss_pred EeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEE
Q psy2671 267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346 (573)
Q Consensus 267 gs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~ 346 (573)
|+.|+.|++||+.+++.+ ..+.+|...|.+++|.| ++++|++++.|++|++||+.++++...+. +...+.+++
T Consensus 141 ~~~d~~i~iwd~~~~~~~-~~~~~h~~~v~~~~~~p-----~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~ 213 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIV-MILQGHEQDIYSLDYFP-----SGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVA 213 (393)
T ss_dssp EETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECT-----TSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEE
T ss_pred EcCCCeEEEEECCCCcEE-EEEccCCCCEEEEEEcC-----CCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEE
Confidence 999999999999988655 45789999999999977 56789999999999999999998877665 456788888
Q ss_pred ECC-Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheee
Q psy2671 347 WGG-SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA 424 (573)
Q Consensus 347 ~~~-~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (573)
|++ ++ .+++|+.|++|++||++++.....+..
T Consensus 214 ~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~---------------------------------------------- 247 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDS---------------------------------------------- 247 (393)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-----------------------------------------------
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEeecc----------------------------------------------
Confidence 876 44 688888888888888876644322210
Q ss_pred eCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC------------
Q psy2671 425 QCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG------------ 492 (573)
Q Consensus 425 ~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~------------ 492 (573)
......+|...|.+++|+|+|++|++|+.||+|++||+++.
T Consensus 248 ---------------------------~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~ 300 (393)
T 1erj_A 248 ---------------------------ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 300 (393)
T ss_dssp --------------------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------
T ss_pred ---------------------------cccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCC
Confidence 00112468888999999999999999999999999998753
Q ss_pred eEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEcc------CCCEEEEeeCCC
Q psy2671 493 KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAP------DGEKVASGGKDK 566 (573)
Q Consensus 493 ~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~------d~~~l~s~~~d~ 566 (573)
.+...+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|.+.|.+++|++ ++++|+|||.|+
T Consensus 301 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg 380 (393)
T 1erj_A 301 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDC 380 (393)
T ss_dssp CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTS
T ss_pred cceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCC
Confidence 34567789999999999999999999999999999999999999999999999999999986 678999999999
Q ss_pred cEEEcc
Q psy2671 567 VLRLWQ 572 (573)
Q Consensus 567 ~i~iw~ 572 (573)
+|++|+
T Consensus 381 ~i~iW~ 386 (393)
T 1erj_A 381 KARIWK 386 (393)
T ss_dssp EEEEEE
T ss_pred cEEECc
Confidence 999997
No 42
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.1e-42 Score=337.99 Aligned_cols=320 Identities=17% Similarity=0.275 Sum_probs=277.6
Q ss_pred CCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceec
Q psy2671 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285 (573)
Q Consensus 206 h~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~ 285 (573)
|.++|.+++|+|||++++++..++.+.+|+...........+|...|.+++|+|++++|++++ ||.|++||+.++....
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 456789999999999999998888777777665555555568999999999999999999999 9999999998765432
Q ss_pred cc----ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe--EEEEecCCCccEEEEEECCCc-EEEEEeC
Q psy2671 286 QP----MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ--CVRVLTSHTRSVTCIRWGGSG-LIYSASQ 358 (573)
Q Consensus 286 ~~----~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~-~l~s~s~ 358 (573)
.. ..+|...|.+++|.| +++++++++.||.|++||+..++ ....+..|...|.+++|++++ .+++++.
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 161 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLP-----DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS 161 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECT-----TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred eeecccccCCCCcEEEEEEcC-----CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeC
Confidence 21 127889999999987 56789999999999999998876 566778899999999999876 7899999
Q ss_pred CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD 438 (573)
Q Consensus 359 d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 438 (573)
|+.|++||++++.....+.+|...+..++++ |++..+++++.|
T Consensus 162 dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~-------------------------------------~~~~~l~~~~~d 204 (337)
T 1gxr_A 162 DGNIAVWDLHNQTLVRQFQGHTDGASCIDIS-------------------------------------NDGTKLWTGGLD 204 (337)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEC-------------------------------------TTSSEEEEEETT
T ss_pred CCcEEEEeCCCCceeeeeecccCceEEEEEC-------------------------------------CCCCEEEEEecC
Confidence 9999999999999999999998888888776 457899999999
Q ss_pred CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEE
Q psy2671 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV 518 (573)
Q Consensus 439 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~la 518 (573)
+.|++||+++.... .. ..+...+.+++|+|++++|++++.|+.|++||.++++. ..+..|...|.+++|+|++++|+
T Consensus 205 g~i~~~d~~~~~~~-~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~ 281 (337)
T 1gxr_A 205 NTVRSWDLREGRQL-QQ-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFV 281 (337)
T ss_dssp SEEEEEETTTTEEE-EE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEE
T ss_pred CcEEEEECCCCceE-ee-ecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEE
Confidence 99999999876432 22 34677899999999999999999999999999998775 46778999999999999999999
Q ss_pred EEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 519 SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 519 s~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
+++.|+.|++||+.+++.+.. ..|...|.++.|+|++++|++++.||.|++|+
T Consensus 282 ~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 282 STGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp EEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred EecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 999999999999999887644 45788999999999999999999999999997
No 43
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.8e-41 Score=346.23 Aligned_cols=320 Identities=29% Similarity=0.538 Sum_probs=278.5
Q ss_pred cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD 182 (573)
Q Consensus 103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (573)
...+.||.+.|.. +++++|++|+||+.||+|+|||+.+++++
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~------------------------------------- 152 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCL------------------------------------- 152 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEE-------------------------------------
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEE-------------------------------------
Confidence 3467899997643 24557899999999999999999877543
Q ss_pred EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671 183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262 (573)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~ 262 (573)
..+.+|.+.|.+++|+ +..+++|+.|++|++||+.+++.+..+.+|...|.+++|+ ++
T Consensus 153 ------------------~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~ 210 (445)
T 2ovr_B 153 ------------------RTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EK 210 (445)
T ss_dssp ------------------EECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TT
T ss_pred ------------------EEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CC
Confidence 2356899999999998 5699999999999999999999999999999999999995 56
Q ss_pred eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE
Q psy2671 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV 342 (573)
Q Consensus 263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v 342 (573)
.|++|+.||.|++||+.+++.+ ..+.+|...|.++.| +++.+++++.||.|++||+.+++++..+.+|...|
T Consensus 211 ~l~s~s~dg~i~~wd~~~~~~~-~~~~~~~~~v~~~~~-------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v 282 (445)
T 2ovr_B 211 RVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQY-------DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV 282 (445)
T ss_dssp EEEEEETTSEEEEEESSSCCEE-EEEECCSSCEEEEEE-------CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCE
T ss_pred EEEEEeCCCEEEEEECCCCcEE-EEEcCCcccEEEEEE-------CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCce
Confidence 8999999999999999988765 356789999999987 34679999999999999999999999999999999
Q ss_pred EEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671 343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY 422 (573)
Q Consensus 343 ~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (573)
.++.| ....+++++.|+.|++||++++.....+.+|...+..+.++
T Consensus 283 ~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--------------------------------- 328 (445)
T 2ovr_B 283 YSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--------------------------------- 328 (445)
T ss_dssp EEEEE-CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE---------------------------------
T ss_pred EEEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe---------------------------------
Confidence 99999 45589999999999999999999998898888776655432
Q ss_pred eeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc---ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee-
Q psy2671 423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG---HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL- 498 (573)
Q Consensus 423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~---h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~- 498 (573)
+.++++|+.||.|++||+++.. .+..+.+ |...|.+++|+ +++|++|+.||.|++||..+++.+..+
T Consensus 329 ------~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 399 (445)
T 2ovr_B 329 ------DNILVSGNADSTVKIWDIKTGQ-CLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLV 399 (445)
T ss_dssp ------TTEEEEEETTSCEEEEETTTCC-EEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ------CCEEEEEeCCCeEEEEECCCCc-EEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeee
Confidence 5689999999999999997754 3445544 88899999996 579999999999999999999988887
Q ss_pred ----cCCcceEEEEEECCCCCEEEEEeCCCc----EEEEeCCc
Q psy2671 499 ----RGHVQAVYMVAWSSDSRLLVSGSADST----LKVWNMKT 533 (573)
Q Consensus 499 ----~~h~~~v~~v~~s~dg~~las~s~D~~----v~vwd~~~ 533 (573)
.+|...|++++|+|++.++|+|+.||+ |.+||+..
T Consensus 400 ~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 400 TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp ECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred ccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 478889999999999999999999998 99999864
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.4e-41 Score=333.21 Aligned_cols=321 Identities=19% Similarity=0.328 Sum_probs=271.1
Q ss_pred ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ 188 (573)
Q Consensus 109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
|.++|.+++|+|||++++++..++.+.+|+.......
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------- 44 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQ------------------------------------------- 44 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEE-------------------------------------------
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCcccc-------------------------------------------
Confidence 6778999999999999999988777766654321110
Q ss_pred eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee---eEEe--cCCCCcEEEEEEcCCCCe
Q psy2671 189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP---LFKC--EGHKHWVLCIAWSPDSKQ 263 (573)
Q Consensus 189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~---~~~~--~~h~~~V~~v~~s~dg~~ 263 (573)
....+|.+.|.+++|+|++++|++++ |+.|++||+.++.. +..+ .+|...|.+++|+|++++
T Consensus 45 ------------~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 111 (337)
T 1gxr_A 45 ------------INTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT 111 (337)
T ss_dssp ------------EEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSE
T ss_pred ------------ceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCE
Confidence 01226999999999999999999998 99999999987542 2333 379999999999999999
Q ss_pred EEEEeeCCeEEEEECCCCce-ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE
Q psy2671 264 LVSGCKNGVIHAWDSSTGKQ-IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV 342 (573)
Q Consensus 264 l~sgs~dg~i~vwd~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v 342 (573)
|++++.||.|++||+.+++. ....+.+|...|.+++|.| +++++++++.||.|++||+.+++....+..|...+
T Consensus 112 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i 186 (337)
T 1gxr_A 112 LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP-----DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA 186 (337)
T ss_dssp EEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred EEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECC-----CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCce
Confidence 99999999999999988763 2234667889999999876 56789999999999999999999999999999999
Q ss_pred EEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671 343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421 (573)
Q Consensus 343 ~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (573)
.+++|++++ .+++++.|+.|++||++++.....+. +...+..++++
T Consensus 187 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s-------------------------------- 233 (337)
T 1gxr_A 187 SCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYC-------------------------------- 233 (337)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC--------------------------------
T ss_pred EEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEEC--------------------------------
Confidence 999999877 79999999999999999887766553 34445555544
Q ss_pred eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC
Q psy2671 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH 501 (573)
Q Consensus 422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h 501 (573)
|++.++++++.++.+++||+.+.. ...+..|...|.+++|+|++++|++++.||.|++||..+++.+... .|
T Consensus 234 -----~~~~~l~~~~~~~~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~ 305 (337)
T 1gxr_A 234 -----PTGEWLAVGMESSNVEVLHVNKPD--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KE 305 (337)
T ss_dssp -----TTSSEEEEEETTSCEEEEETTSSC--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-EC
T ss_pred -----CCCCEEEEEcCCCcEEEEECCCCC--eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cC
Confidence 668899999999999999998754 3466789999999999999999999999999999999998877544 47
Q ss_pred cceEEEEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671 502 VQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531 (573)
Q Consensus 502 ~~~v~~v~~s~dg~~las~s~D~~v~vwd~ 531 (573)
...+.+++|+|++++|++++.|+.|++|++
T Consensus 306 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 306 SSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 789999999999999999999999999996
No 45
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.7e-41 Score=342.01 Aligned_cols=315 Identities=28% Similarity=0.556 Sum_probs=280.0
Q ss_pred CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC
Q psy2671 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281 (573)
Q Consensus 202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~ 281 (573)
.+.||.+.|.. +++++|++|++|+.|++|++||+.+++.+..+.+|...|.+++|+ ++.|++|+.||.|++||+.++
T Consensus 113 ~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~ 189 (445)
T 2ovr_B 113 VLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG 189 (445)
T ss_dssp EEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT
T ss_pred EecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC
Confidence 45689887543 355678999999999999999999999999999999999999997 569999999999999999998
Q ss_pred ceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCe
Q psy2671 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRT 361 (573)
Q Consensus 282 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~ 361 (573)
+.+ ..+.+|...|.++.|. ++.+++++.||+|++||+.+++.+..+.+|...|.++.+ ....+++++.|+.
T Consensus 190 ~~~-~~~~~h~~~v~~~~~~-------~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~ 260 (445)
T 2ovr_B 190 ECI-HTLYGHTSTVRCMHLH-------EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-DGRRVVSGAYDFM 260 (445)
T ss_dssp EEE-EEECCCSSCEEEEEEE-------TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-CSSCEEEEETTSC
T ss_pred cEE-EEECCCCCcEEEEEec-------CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-CCCEEEEEcCCCE
Confidence 765 4567899999999884 357999999999999999999999999999999999999 4457999999999
Q ss_pred EEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeE
Q psy2671 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTL 441 (573)
Q Consensus 362 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i 441 (573)
|++||++++.....+.+|...+.++++ ++..+++|+.|+.|
T Consensus 261 i~iwd~~~~~~~~~~~~~~~~v~~~~~---------------------------------------~~~~l~~~~~d~~i 301 (445)
T 2ovr_B 261 VKVWDPETETCLHTLQGHTNRVYSLQF---------------------------------------DGIHVVSGSLDTSI 301 (445)
T ss_dssp EEEEEGGGTEEEEEECCCSSCEEEEEE---------------------------------------CSSEEEEEETTSCE
T ss_pred EEEEECCCCcEeEEecCCCCceEEEEE---------------------------------------CCCEEEEEeCCCeE
Confidence 999999999999999999888877765 25689999999999
Q ss_pred EEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC---CcceEEEEEECCCCCEEE
Q psy2671 442 FLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG---HVQAVYMVAWSSDSRLLV 518 (573)
Q Consensus 442 ~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~---h~~~v~~v~~s~dg~~la 518 (573)
++||+++.. ....+.+|...+.++.++ ++++++|+.||.|++||.++++.+..+.+ |...|++++|+ +++|+
T Consensus 302 ~i~d~~~~~-~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~ 376 (445)
T 2ovr_B 302 RVWDVETGN-CIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVI 376 (445)
T ss_dssp EEEETTTCC-EEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEE
T ss_pred EEEECCCCC-EEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEE
Confidence 999998754 456778899889888774 67999999999999999999999998886 88899999996 57999
Q ss_pred EEeCCCcEEEEeCCcccccccc-----cCcCCCEEEEEEccCCCEEEEeeCCCc----EEEcc
Q psy2671 519 SGSADSTLKVWNMKTKKIEQDL-----PGHGDEVYAVDWAPDGEKVASGGKDKV----LRLWQ 572 (573)
Q Consensus 519 s~s~D~~v~vwd~~~~~~~~~l-----~~h~~~v~~~~~s~d~~~l~s~~~d~~----i~iw~ 572 (573)
+|+.||.|++||+.+++.+..+ .+|.+.|++++|+|++.+|++|+.||+ |.+|+
T Consensus 377 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~d 439 (445)
T 2ovr_B 377 TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 439 (445)
T ss_dssp EEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEE
T ss_pred EEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEE
Confidence 9999999999999999887776 578899999999999999999999998 99987
No 46
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1e-40 Score=342.61 Aligned_cols=318 Identities=25% Similarity=0.458 Sum_probs=270.7
Q ss_pred ccCCCccccE-EEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671 104 SSMPGHAEAV-ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD 182 (573)
Q Consensus 104 ~~~~gH~~~V-~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (573)
..+.+|.+.| .+++| ++++|+||+.||+|++||+.+++++
T Consensus 115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~------------------------------------- 155 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFL------------------------------------- 155 (464)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEE-------------------------------------
T ss_pred EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEE-------------------------------------
Confidence 4677999885 66666 5789999999999999999877543
Q ss_pred EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEc--CC
Q psy2671 183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS--PD 260 (573)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s--~d 260 (573)
..+.+|.+.|.+++|+|++ .|++|+.|++|++||+.+++.+..+.+|...|.+++|+ ++
T Consensus 156 ------------------~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~ 216 (464)
T 3v7d_B 156 ------------------LQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKN 216 (464)
T ss_dssp ------------------EEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSS
T ss_pred ------------------EEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCC
Confidence 2245899999999999998 89999999999999999999999999999999999998 57
Q ss_pred CCeEEEEeeCCeEEEEECCCCcee----------------------cccccCCcccEEEEEecccccCCCCCEEEEEeCC
Q psy2671 261 SKQLVSGCKNGVIHAWDSSTGKQI----------------------GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD 318 (573)
Q Consensus 261 g~~l~sgs~dg~i~vwd~~~~~~~----------------------~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d 318 (573)
+.+|++|+.||.|++||+.++... ...+.+|...+.++.. +++++++++.|
T Consensus 217 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~l~~~~~d 289 (464)
T 3v7d_B 217 IKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG-------HGNIVVSGSYD 289 (464)
T ss_dssp CEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE-------ETTEEEEEETT
T ss_pred CCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcC-------CCCEEEEEeCC
Confidence 889999999999999999876532 1235577777777643 45789999999
Q ss_pred CcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEE
Q psy2671 319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVE 397 (573)
Q Consensus 319 g~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~ 397 (573)
|.|++||+.+++++..+.+|...|.+++|++++ .+++|+.|++|++||++++.....+.+|...|..++++
T Consensus 290 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-------- 361 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS-------- 361 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--------
T ss_pred CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--------
Confidence 999999999999999999999999999999876 79999999999999999999999999999988877764
Q ss_pred EcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEE
Q psy2671 398 ATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS 477 (573)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las 477 (573)
+.++++++.||+|++||+.+....... .|...+..++|+|+++++++
T Consensus 362 -------------------------------~~~l~s~s~dg~v~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~ 408 (464)
T 3v7d_B 362 -------------------------------DKFLVSAAADGSIRGWDANDYSRKFSY--HHTNLSAITTFYVSDNILVS 408 (464)
T ss_dssp -------------------------------SSEEEEEETTSEEEEEETTTCCEEEEE--ECTTCCCEEEEEECSSEEEE
T ss_pred -------------------------------CCEEEEEeCCCcEEEEECCCCceeeee--cCCCCccEEEEEeCCCEEEE
Confidence 458999999999999999876543322 35566788999999999999
Q ss_pred eeCCCcEEEEeCCCCeEEEe-ecCCcceEEEEEECCCCCEEEEEeCCCcEEEE
Q psy2671 478 ASFDKSIKLWDGRIGKFITT-LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529 (573)
Q Consensus 478 ~s~dg~i~lwd~~~~~~~~~-~~~h~~~v~~v~~s~dg~~las~s~D~~v~vw 529 (573)
|+ ||.|++||.++++.+.. +..|...|++++|+ +..++++++.|+.+.+|
T Consensus 409 ~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 409 GS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp EE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred ec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 98 99999999999999886 67889999999997 34455566667765554
No 47
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-41 Score=332.65 Aligned_cols=296 Identities=19% Similarity=0.313 Sum_probs=243.2
Q ss_pred cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV 184 (573)
Q Consensus 105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (573)
.|.+|.+.|++++|+|++++||+|+.|+.|+|||+.+++++.
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~-------------------------------------- 68 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLG-------------------------------------- 68 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEE--------------------------------------
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhh--------------------------------------
Confidence 467899999999999999999999999999999998775432
Q ss_pred EeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeE
Q psy2671 185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264 (573)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l 264 (573)
.+.+|...|.+++|+|++++|++++.|++|++||+.+++.+..+. |...|.+++|+|++++|
T Consensus 69 -----------------~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 130 (369)
T 3zwl_B 69 -----------------TLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYF 130 (369)
T ss_dssp -----------------EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEE
T ss_pred -----------------hhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEE
Confidence 245799999999999999999999999999999999998888777 88899999999999999
Q ss_pred EEEeeC-----CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC
Q psy2671 265 VSGCKN-----GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT 339 (573)
Q Consensus 265 ~sgs~d-----g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~ 339 (573)
++++.+ +.|++||+..+..... +.... ......+..|.
T Consensus 131 ~~~~~~~~~~~g~i~~~d~~~~~~~~~-------------------------~~~~~------------~~~~~~~~~~~ 173 (369)
T 3zwl_B 131 LAILDNVMKNPGSINIYEIERDSATHE-------------------------LTKVS------------EEPIHKIITHE 173 (369)
T ss_dssp EEEECCBTTBCCEEEEEEEEECTTTCC-------------------------EEEEC------------SSCSEEEECCT
T ss_pred EEecCCccCCCCEEEEEEecCCcccee-------------------------ecccc------------cceeeeccCCc
Confidence 999999 9999999865432110 00000 01112222333
Q ss_pred c--cEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671 340 R--SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH 417 (573)
Q Consensus 340 ~--~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (573)
. .+.+++|+++
T Consensus 174 ~~~~~~~~~~~~~------------------------------------------------------------------- 186 (369)
T 3zwl_B 174 GLDAATVAGWSTK------------------------------------------------------------------- 186 (369)
T ss_dssp TCCCEEEEEECGG-------------------------------------------------------------------
T ss_pred CccceeEEEEcCC-------------------------------------------------------------------
Confidence 3 5566655544
Q ss_pred hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe
Q psy2671 418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497 (573)
Q Consensus 418 ~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~ 497 (573)
+..+++++.||.|++||+.+.......+..|...|.+++|+|++++|++++.||.|++||.++++.+..
T Consensus 187 -----------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 187 -----------GKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp -----------GCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred -----------CCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeee
Confidence 344555555555555555543344555667888899999999999999999999999999999998888
Q ss_pred ecCCcceEEEEEECCCCCEEEEEeCCC--------------cEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEee
Q psy2671 498 LRGHVQAVYMVAWSSDSRLLVSGSADS--------------TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563 (573)
Q Consensus 498 ~~~h~~~v~~v~~s~dg~~las~s~D~--------------~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~ 563 (573)
+. +...+.+++|+|+++++++++.++ .+++||+.+++.+..+.+|.+.|.+++|+|++++|++++
T Consensus 256 ~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 256 YE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGG 334 (369)
T ss_dssp EE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred ec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEc
Confidence 87 667899999999999999999988 899999999999999999999999999999999999999
Q ss_pred CCCcEEEcc
Q psy2671 564 KDKVLRLWQ 572 (573)
Q Consensus 564 ~d~~i~iw~ 572 (573)
.||.|++|+
T Consensus 335 ~dg~v~iw~ 343 (369)
T 3zwl_B 335 EDGFIRLHH 343 (369)
T ss_dssp TTSEEEEEE
T ss_pred CCCeEEEEE
Confidence 999999996
No 48
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.1e-40 Score=325.55 Aligned_cols=287 Identities=26% Similarity=0.488 Sum_probs=228.3
Q ss_pred cCCCCCCCcEEEEEEcCC-CCeEEEEeCCCeEEEEECCCC-----eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEE
Q psy2671 201 SSMPGHAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQ-----TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH 274 (573)
Q Consensus 201 ~~~~gh~~~V~~~~fsp~-g~~las~s~d~~i~iwd~~~~-----~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~ 274 (573)
.++.||.+.|++++|+|+ +++|||||.|++|+|||+.+. .+...+.+|...|.+++|+|+|++|++|+.|+.|+
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~ 111 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 111 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccce
Confidence 467899999999999998 689999999999999998764 34567899999999999999999999999999999
Q ss_pred EEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE-EEecCCCccEEEEEECCCcEE
Q psy2671 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV-RVLTSHTRSVTCIRWGGSGLI 353 (573)
Q Consensus 275 vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~h~~~v~~~~~~~~~~l 353 (573)
+|+...+.... ....+...+....+.+ .++.+++++.|+.+++||....... ....+|...+.+++|.+++
T Consensus 112 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-- 183 (340)
T 4aow_A 112 LWDLTTGTTTR-RFVGHTKDVLSVAFSS-----DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS-- 183 (340)
T ss_dssp EEETTTTEEEE-EEECCSSCEEEEEECT-----TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCS--
T ss_pred EEeecccceee-eecCCCCceeEEEEee-----cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCC--
Confidence 99998776543 3344555666666554 4578999999999999998765433 3345677777776665332
Q ss_pred EEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671 354 YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV 433 (573)
Q Consensus 354 ~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 433 (573)
...+++
T Consensus 184 --------------------------------------------------------------------------~~~~~~ 189 (340)
T 4aow_A 184 --------------------------------------------------------------------------SNPIIV 189 (340)
T ss_dssp --------------------------------------------------------------------------SSCEEE
T ss_pred --------------------------------------------------------------------------CCcEEE
Confidence 123344
Q ss_pred EEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCC
Q psy2671 434 SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD 513 (573)
Q Consensus 434 sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~d 513 (573)
+++.|++|++||+++.. ....+.+|...|++++|+|++++|++|+.||.|++||.++++.+..+..+ ..+.+++|+|+
T Consensus 190 s~~~d~~i~i~d~~~~~-~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~ 267 (340)
T 4aow_A 190 SCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPN 267 (340)
T ss_dssp EEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSS
T ss_pred EEcCCCEEEEEECCCCc-eeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCC
Confidence 55555555555554432 24455678889999999999999999999999999999999998888765 57999999998
Q ss_pred CCEEEEEeCCCcEEEEeCCccccccc---------ccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 514 SRLLVSGSADSTLKVWNMKTKKIEQD---------LPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 514 g~~las~s~D~~v~vwd~~~~~~~~~---------l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
+.++ +++.|+.|++||++++..+.. ..+|...|++++|+||+++|++|+.||.|++|+
T Consensus 268 ~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 268 RYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ 334 (340)
T ss_dssp SSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred Ccee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 8665 566799999999988765433 347889999999999999999999999999997
No 49
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.4e-41 Score=361.33 Aligned_cols=294 Identities=24% Similarity=0.475 Sum_probs=242.3
Q ss_pred ccCCCccccEEEEEEcCCC-CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671 104 SSMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD 182 (573)
Q Consensus 104 ~~~~gH~~~V~~l~~s~~~-~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (573)
..+.+|.+.|++|+|+|++ ++|+|||.|++|||||+.+.....
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~------------------------------------ 419 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY------------------------------------ 419 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS------------------------------------
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc------------------------------------
Confidence 4578999999999999875 799999999999999987643210
Q ss_pred EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671 183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262 (573)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~ 262 (573)
..+...+.||...|.+++|+|++++|++|+.|++|+|||+.++..+..+.+|...|.+++|+|+++
T Consensus 420 --------------~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~ 485 (694)
T 3dm0_A 420 --------------GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 485 (694)
T ss_dssp --------------CEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSS
T ss_pred --------------ccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCC
Confidence 001123568999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeeCCeEEEEECCCCcee--cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc
Q psy2671 263 QLVSGCKNGVIHAWDSSTGKQI--GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR 340 (573)
Q Consensus 263 ~l~sgs~dg~i~vwd~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~ 340 (573)
+|++|+.|++|++||....... .....+|...|.+++|.|.. ....+++++.|++|++||+...++...+.+|..
T Consensus 486 ~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~ 562 (694)
T 3dm0_A 486 QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT---LQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTG 562 (694)
T ss_dssp CEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS---SSCEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred EEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC---CcceEEEEeCCCeEEEEECCCCcEEEEEcCCCC
Confidence 9999999999999998654332 22345799999999998742 235799999999999999999999999999999
Q ss_pred cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671 341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL 419 (573)
Q Consensus 341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (573)
.|.+++|++++ .+++|+.|++|++||+.++..+..+
T Consensus 563 ~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~------------------------------------------- 599 (694)
T 3dm0_A 563 YVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL------------------------------------------- 599 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECC-------------------------------------------
T ss_pred CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe-------------------------------------------
Confidence 99999998876 6778888888888887665432211
Q ss_pred hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671 420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR 499 (573)
Q Consensus 420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~ 499 (573)
.+...|.+++|+|++.++++++ |+.|++||+++++.+..+.
T Consensus 600 --------------------------------------~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~ 640 (694)
T 3dm0_A 600 --------------------------------------EANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLK 640 (694)
T ss_dssp --------------------------------------BCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEC
T ss_pred --------------------------------------cCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhc
Confidence 1224588899999988887765 5669999999988877665
Q ss_pred CCc-------------------ceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671 500 GHV-------------------QAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532 (573)
Q Consensus 500 ~h~-------------------~~v~~v~~s~dg~~las~s~D~~v~vwd~~ 532 (573)
.+. ..+++++|||||++|++|+.||+|++|++.
T Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 641 VDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 331 137889999999999999999999999985
No 50
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-43 Score=361.18 Aligned_cols=282 Identities=12% Similarity=0.134 Sum_probs=219.8
Q ss_pred CCCCCcEEEEEEcCC------CCeEEEEeCCCeEEEEECCCCe-----------eeEEecCCCCcEEEEEEcCCCCeEEE
Q psy2671 204 PGHAEAVISVKFSPN------GRSLASGSGDTTVRFWDVTTQT-----------PLFKCEGHKHWVLCIAWSPDSKQLVS 266 (573)
Q Consensus 204 ~gh~~~V~~~~fsp~------g~~las~s~d~~i~iwd~~~~~-----------~~~~~~~h~~~V~~v~~s~dg~~l~s 266 (573)
.+|.+.|.+++|+|+ +.+||+|+.|++|+|||+.++. +...+.+|...|.+++|++++ .|++
T Consensus 204 ~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~las 282 (524)
T 2j04_B 204 VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVC 282 (524)
T ss_dssp EECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEE
T ss_pred EecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEE
Confidence 357889999999997 5799999999999999997653 234678999999999999865 8999
Q ss_pred EeeCCeEEEEECCCCceecccccCCcccEEEEE--ecccccCCCC-CEEEEEeCCCcEEEEECCCCeEEEEecCCCc--c
Q psy2671 267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALS--WEPFHLNHQC-RRFASSGKDGAIRIWDVILSQCVRVLTSHTR--S 341 (573)
Q Consensus 267 gs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~--~ 341 (573)
|+.||+|++||++++......+.+|...|.+++ |.| ++ .+|+|++.|++|++||+..+++...+.+|.. .
T Consensus 283 gs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~-----~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 283 GFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSD-----FEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN 357 (524)
T ss_dssp EETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCT-----TSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred EeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCC-----CCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence 999999999999877544345678999999994 443 44 6899999999999999988877666766654 4
Q ss_pred EEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671 342 VTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA 420 (573)
Q Consensus 342 v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (573)
|.+++|++++ .+++++.|++|++||++++....++.+|...|++++++
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~S------------------------------- 406 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVS------------------------------- 406 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECC-------------------------------
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeC-------------------------------
Confidence 7899999976 78899999999999999998888888999999999887
Q ss_pred heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc-----ccccEEEEEECCCCCEEEEeeCCCcEEEEeCC-CCeE
Q psy2671 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG-----HQQLINCVEFSPDGRIIASASFDKSIKLWDGR-IGKF 494 (573)
Q Consensus 421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~-----h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~-~~~~ 494 (573)
|++..|++|+.||+|++||+... .+..... +...|.+++|+|+|+.+.. . ..+++|+.. ++..
T Consensus 407 ------p~g~~l~Sgs~Dgtv~lwd~~~~--~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~-~--~~~~~~~~~~~g~~ 475 (524)
T 2j04_B 407 ------RLHPMVLAGSADGSLIITNAARR--LLHGIKNSSATQKSLRLWKWDYSIKDDKYRI-D--SSYEVYPLTVNDVS 475 (524)
T ss_dssp ------SSCCBCEEEETTTEEECCBSCSS--TTTCC------CCCCEEEECBCCSSSCEEEE-C--CCCCCCC-------
T ss_pred ------CCCCeEEEEECCCEEEEEechHh--hccccccCccceeeeEEEEeccCCCCCeEEc-c--CCceecccccCCcc
Confidence 45788999999999999998643 2211111 1124779999999986532 2 234444433 4677
Q ss_pred EEeecCCcceEEEEEECCCCC---EEEEEeCCCcEEEEeCCc
Q psy2671 495 ITTLRGHVQAVYMVAWSSDSR---LLVSGSADSTLKVWNMKT 533 (573)
Q Consensus 495 ~~~~~~h~~~v~~v~~s~dg~---~las~s~D~~v~vwd~~~ 533 (573)
+.++.+|...|++|+|+|+++ ++|+|+.||+||||++..
T Consensus 476 ~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 476 KAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp ------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred eeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 888999999999999999964 999999999999999864
No 51
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-41 Score=342.62 Aligned_cols=348 Identities=11% Similarity=0.185 Sum_probs=265.4
Q ss_pred cccccC-CCccccEEEEEEcC-CCCeeEEeeCCCcEEEeeccC---CcceeeecCCCeeeeecccccccccccccCCCCC
Q psy2671 101 RCTSSM-PGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTT---QTPLFKCEGTPYLFYVNETEITKTLADVLPLDTL 175 (573)
Q Consensus 101 ~~~~~~-~gH~~~V~~l~~s~-~~~~lat~s~D~~vrvWd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (573)
++...+ .+|.++|++++|+| ++++||||+.|++|+|||+.+ +.+..
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~----------------------------- 103 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYS----------------------------- 103 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCS-----------------------------
T ss_pred eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccc-----------------------------
Confidence 344456 78999999999999 999999999999999999875 22100
Q ss_pred CccceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECC---CCeeeEEec------
Q psy2671 176 NTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT---TQTPLFKCE------ 246 (573)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~---~~~~~~~~~------ 246 (573)
+.. ..+|...|.+++|+|++++|++|+.|++|++||+. +++.+....
T Consensus 104 -----------------------~~~-~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~ 159 (437)
T 3gre_A 104 -----------------------SSL-TYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRK 159 (437)
T ss_dssp -----------------------CSE-EEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred -----------------------eee-eccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEE
Confidence 000 11489999999999999999999999999999984 443332222
Q ss_pred ----C--CCCcEEEEE--EcCCCCeEEEEeeCCeEEEEECCCCceecccccC--CcccEEEEEecccccCCCCCEEEEEe
Q psy2671 247 ----G--HKHWVLCIA--WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRG--HKQWITALSWEPFHLNHQCRRFASSG 316 (573)
Q Consensus 247 ----~--h~~~V~~v~--~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~~~l~s~~ 316 (573)
. +...+.++. +++++.+|++|+.||.|++||+++++.+. .+.+ |...|.+++|.| +++++++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~h~~~v~~~~~s~-----~~~~l~s~~ 233 (437)
T 3gre_A 160 INLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQ-IIENSPRHGAVSSICIDE-----ECCVLILGT 233 (437)
T ss_dssp EEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEE-EEECCGGGCCEEEEEECT-----TSCEEEEEE
T ss_pred EEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeE-EEccCCCCCceEEEEECC-----CCCEEEEEc
Confidence 1 556677777 66899999999999999999999987754 3445 889999999976 568999999
Q ss_pred CCCcEEEEECCCCeEEEEec-CCCccEEEEEECC----Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEecc
Q psy2671 317 KDGAIRIWDVILSQCVRVLT-SHTRSVTCIRWGG----SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST 390 (573)
Q Consensus 317 ~dg~v~iwd~~~~~~~~~~~-~h~~~v~~~~~~~----~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~ 390 (573)
.||.|++||+..++++..+. .|...|.+++|.+ ++ .+++++.|++|++||++++.....+.+|...+..+.+++
T Consensus 234 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 313 (437)
T 3gre_A 234 TRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLP 313 (437)
T ss_dssp TTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSC
T ss_pred CCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecc
Confidence 99999999999999988876 7888999997753 45 789999999999999999998888888765544333322
Q ss_pred CceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc--ccccEEEEEE
Q psy2671 391 DYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG--HQQLINCVEF 468 (573)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~--h~~~v~~v~~ 468 (573)
+ +..+ .-..+.+ |...|.+++|
T Consensus 314 ~-------------------------------------~~~l-------------------~~~~~~~~~~~~~v~~l~~ 337 (437)
T 3gre_A 314 I-------------------------------------EKGL-------------------EELNFCGIRSLNALSTISV 337 (437)
T ss_dssp B-------------------------------------CSSG-------------------GGCCCCCCCSGGGGCCEEE
T ss_pred c-------------------------------------cccc-------------------ccceecccccCCceEEEEE
Confidence 1 1111 0011233 7888999999
Q ss_pred CCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc---ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCC
Q psy2671 469 SPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV---QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD 545 (573)
Q Consensus 469 sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~---~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~ 545 (573)
+ ++++|++|+.||.|++||+.+++.+..+.+|. ..+....++++..+++.. |+............|.+
T Consensus 338 ~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~h~~ 408 (437)
T 3gre_A 338 S-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK--------MKRTSTHSVDDSLYHHD 408 (437)
T ss_dssp E-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE--------CC-------------CC
T ss_pred C-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEe--------cccccccccCccccccc
Confidence 9 78999999999999999999999888888763 345666777776665544 33333444455677999
Q ss_pred CEEEEEEccC--CCEEEEeeCCCcEEEcc
Q psy2671 546 EVYAVDWAPD--GEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 546 ~v~~~~~s~d--~~~l~s~~~d~~i~iw~ 572 (573)
.|++++|+++ +.+|++|+.||.|++|+
T Consensus 409 ~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 409 IINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 9999999998 77999999999999996
No 52
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.3e-40 Score=321.56 Aligned_cols=245 Identities=22% Similarity=0.401 Sum_probs=203.3
Q ss_pred cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280 (573)
Q Consensus 201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~ 280 (573)
.++.+|.+.|.+++|+|++++|++|+.|++|++||+.++..+..+.+|...|.+++|+|++++|++|+.|++|++||+.+
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~ 86 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT 86 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence 34668999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCC
Q psy2671 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQD 359 (573)
Q Consensus 281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d 359 (573)
++.+ ..+.+|...|.+++|++++ .+++|+.|
T Consensus 87 ~~~~------------------------------------------------~~~~~h~~~v~~~~~~~~~~~l~sgs~D 118 (304)
T 2ynn_A 87 GEKV------------------------------------------------VDFEAHPDYIRSIAVHPTKPYVLSGSDD 118 (304)
T ss_dssp CCEE------------------------------------------------EEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred CcEE------------------------------------------------EEEeCCCCcEEEEEEcCCCCEEEEECCC
Confidence 6432 2233455556666655443 34455555
Q ss_pred CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671 360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF 439 (573)
Q Consensus 360 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 439 (573)
++|++||+++
T Consensus 119 ~~v~lWd~~~---------------------------------------------------------------------- 128 (304)
T 2ynn_A 119 LTVKLWNWEN---------------------------------------------------------------------- 128 (304)
T ss_dssp SCEEEEEGGG----------------------------------------------------------------------
T ss_pred CeEEEEECCC----------------------------------------------------------------------
Confidence 5555554432
Q ss_pred eEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCCeEEEee-cCCcceEEEEEECC--CCC
Q psy2671 440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGKFITTL-RGHVQAVYMVAWSS--DSR 515 (573)
Q Consensus 440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~~~~~~~-~~h~~~v~~v~~s~--dg~ 515 (573)
.......+.+|...|.+++|+| ++.+|++|+.|++|++||++.+.....+ .+|...+..++|+| +++
T Consensus 129 ---------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 199 (304)
T 2ynn_A 129 ---------NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP 199 (304)
T ss_dssp ---------TTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCC
T ss_pred ---------CcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCC
Confidence 2222334567888899999999 6899999999999999999887655554 35667899999987 788
Q ss_pred EEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 516 LLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 516 ~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
+|++|+.|++|++||+++++++..+.+|...|.+++|+|++++|++|+.|++|++|+
T Consensus 200 ~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd 256 (304)
T 2ynn_A 200 YMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN 256 (304)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred EEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999997
No 53
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-42 Score=354.67 Aligned_cols=309 Identities=10% Similarity=0.096 Sum_probs=226.4
Q ss_pred cCCCCeEEEEeCCCeEEEEECCCCeee----EEecCCCCcEEEEEEcCC------CCeEEEEeeCCeEEEEECCCCcee-
Q psy2671 216 SPNGRSLASGSGDTTVRFWDVTTQTPL----FKCEGHKHWVLCIAWSPD------SKQLVSGCKNGVIHAWDSSTGKQI- 284 (573)
Q Consensus 216 sp~g~~las~s~d~~i~iwd~~~~~~~----~~~~~h~~~V~~v~~s~d------g~~l~sgs~dg~i~vwd~~~~~~~- 284 (573)
+|+++.+++++.|++|+|||+.+++.. ..+.+|.+.|.+++|+|+ +.+||+|+.||+|++||+..+...
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~ 249 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV 249 (524)
T ss_dssp ------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred chhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccc
Confidence 444555666778999999999876532 345678889999999997 579999999999999999876421
Q ss_pred ---------cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC-eEEEEecCCCccEEEE--EECCCc-
Q psy2671 285 ---------GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCI--RWGGSG- 351 (573)
Q Consensus 285 ---------~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~--~~~~~~- 351 (573)
...+.+|...|.+++|.+. ..|++|+.||+|++||+.++ .+...+.+|...|.++ .|++++
T Consensus 250 ~~~~~~~~p~~~l~~h~~~v~sv~~s~~------~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~ 323 (524)
T 2j04_B 250 HVFKMCEKPSLTLSLADSLITTFDFLSP------TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFED 323 (524)
T ss_dssp SEEECCCSCSEEECCTTTCEEEEEESSS------SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSC
T ss_pred ccceeecCceEEEEcCCCCEEEEEecCC------CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCC
Confidence 1135689999999999751 47999999999999999876 3455688999999999 567764
Q ss_pred -EEEEEeCCCeEEEEeCCCCeeeEeccCCcc--eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671 352 -LIYSASQDRTIKVWRASDGVMCRTLEGHAH--WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE 428 (573)
Q Consensus 352 -~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (573)
.+++++.|++|++||++++.....+.+|.. .|.+++++ |+
T Consensus 324 ~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fs-------------------------------------p~ 366 (524)
T 2j04_B 324 TVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYC-------------------------------------PQ 366 (524)
T ss_dssp CEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEE-------------------------------------TT
T ss_pred eEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeC-------------------------------------CC
Confidence 789999999999999988776655555542 24445544 56
Q ss_pred CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC-----Ccc
Q psy2671 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG-----HVQ 503 (573)
Q Consensus 429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~-----h~~ 503 (573)
+..+++++.|++|++||+++.. .+..+.+|...|++|+|+|+|++|++|+.||+|++||...+ .+..++. +..
T Consensus 367 ~~~l~s~~~d~tv~lwd~~~~~-~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~ 444 (524)
T 2j04_B 367 IYSYIYSDGASSLRAVPSRAAF-AVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSL 444 (524)
T ss_dssp TTEEEEECSSSEEEEEETTCTT-CCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCC
T ss_pred cCeEEEeCCCCcEEEEECcccc-cceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccceeee
Confidence 7889999999999999998754 34567789999999999999999999999999999998653 2222111 112
Q ss_pred eEEEEEECCCCCEEEEEeCCCcEEEEeCC-cccccccccCcCCCEEEEEEccCCC---EEEEeeCCCcEEEcc
Q psy2671 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMK-TKKIEQDLPGHGDEVYAVDWAPDGE---KVASGGKDKVLRLWQ 572 (573)
Q Consensus 504 ~v~~v~~s~dg~~las~s~D~~v~vwd~~-~~~~~~~l~~h~~~v~~~~~s~d~~---~l~s~~~d~~i~iw~ 572 (573)
.+++++|+|+|+.+. ... .+++|+.. ++.++..+.+|...|++|+|+|+++ +||+|+.||+||||+
T Consensus 445 ~v~~v~~sp~g~~~~-~~~--~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 445 RLWKWDYSIKDDKYR-IDS--SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp EEEECBCCSSSCEEE-ECC--CCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred EEEEeccCCCCCeEE-ccC--CceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence 578999999998653 222 34455443 4667788999999999999999954 999999999999996
No 54
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-42 Score=344.58 Aligned_cols=315 Identities=12% Similarity=0.134 Sum_probs=254.1
Q ss_pred ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ 188 (573)
Q Consensus 109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
-.++|.+|+|||||+++||+|.|++|| |...++
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~--------------------------------------------- 46 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK--------------------------------------------- 46 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS---------------------------------------------
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--cccccc---------------------------------------------
Confidence 457999999999999999999999999 643321
Q ss_pred eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe
Q psy2671 189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC 268 (573)
Q Consensus 189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs 268 (573)
.+.||...|.+++|+|+| .++++.+|+..... +..+ +|...|.+++|||||.+||+++
T Consensus 47 -------------~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~-~~~~-~~~~~V~~vawSPdG~~LAs~s 104 (588)
T 2j04_A 47 -------------DINCNSKNLFHVKEFPLE-------FENKLDFELAQQNG-LLNS-QPVCYPRVCKPSPIDDWMAVLS 104 (588)
T ss_dssp -------------CCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSC-SSTT-SCSCCEEEEEECSSSSCEEEEE
T ss_pred -------------eecCCCccEEEEEECCCC-------CcceEEEEeCCCce-Eeec-CCCCcEEEEEECCCCCEEEEEe
Confidence 235899999999999999 46666666543222 2222 5588899999999999999999
Q ss_pred eCCeEEEEECCCCceecccccCCcc-----cEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe-------EEEEe-
Q psy2671 269 KNGVIHAWDSSTGKQIGQPMRGHKQ-----WITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ-------CVRVL- 335 (573)
Q Consensus 269 ~dg~i~vwd~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-------~~~~~- 335 (573)
.||.|++||... .+ ..+. |.. .+.+++|+| ++++|++|+.||+|++||+..+. .+..+
T Consensus 105 ~dg~V~iwd~~~--~l-~~l~-~~~~~~~~sv~svafSP-----DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~ 175 (588)
T 2j04_A 105 NNGNVSVFKDNK--ML-TNLD-SKGNLSSRTYHCFEWNP-----IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIR 175 (588)
T ss_dssp TTSCEEEEETTE--EE-EECC-CSSCSTTTCEEEEEECS-----SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEE
T ss_pred CCCcEEEEeCCc--ee-eecc-CCCccccccEEEEEEcC-----CCCEEEEEcCCCEEEEEECCCCccccccceeeeeee
Confidence 999999999644 32 2334 544 599999977 78899999999999999998874 35665
Q ss_pred ---cCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCee---eEec-cCCcceeeEEEeccCceeEEEEcCCCceeeCC
Q psy2671 336 ---TSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVM---CRTL-EGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408 (573)
Q Consensus 336 ---~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~---~~~~-~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~ 408 (573)
.+|...|.+++|++++ +++++.|+++++|++.++.. .+++ .+|...|.+++++
T Consensus 176 ~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs------------------- 235 (588)
T 2j04_A 176 LSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV------------------- 235 (588)
T ss_dssp CSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-------------------
T ss_pred cccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-------------------
Confidence 6788899999999999 99999999999999987763 2455 4777778777765
Q ss_pred CCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEE--CCCCCEEEEeeCCCcEEE
Q psy2671 409 ANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF--SPDGRIIASASFDKSIKL 486 (573)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~--sp~g~~las~s~dg~i~l 486 (573)
+..+|+++ +++|++||..+..... ...+|...|..++| +|+++.|++++.||+ ++
T Consensus 236 --------------------g~~LASa~-~~tIkLWd~~~~~~~~-~~~gh~~~V~~va~~~s~d~~~La~a~edG~-kl 292 (588)
T 2j04_A 236 --------------------DYKVVLTC-PGYVHKIDLKNYSISS-LKTGSLENFHIIPLNHEKESTILLMSNKTSY-KV 292 (588)
T ss_dssp --------------------TTEEEEEC-SSEEEEEETTTTEEEE-EECSCCSCCCEEEETTCSSCEEEEECSSCEE-EE
T ss_pred --------------------CCEEEEEe-CCeEEEEECCCCeEEE-EEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EE
Confidence 35788887 6999999988755422 23389999999999 999999999999999 99
Q ss_pred EeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeC
Q psy2671 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK 564 (573)
Q Consensus 487 wd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~ 564 (573)
|... .++++||+..+++. |+++++|+...+. ...+.+ ...|++++|||||+.+|+++.
T Consensus 293 w~~d----------------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 293 LLED----------------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp EESS----------------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred Eeec----------------cEEECCCceEEEEc--CCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 9866 25699999998775 9999999986555 445555 677999999999999998874
No 55
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.2e-39 Score=332.70 Aligned_cols=319 Identities=23% Similarity=0.416 Sum_probs=272.6
Q ss_pred CCCCCCCcE-EEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671 202 SMPGHAEAV-ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280 (573)
Q Consensus 202 ~~~gh~~~V-~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~ 280 (573)
.+.||.+.| .++.| ++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++ +|++|+.||+|++||+++
T Consensus 116 ~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp EEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT
T ss_pred EEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC
Confidence 466898875 55555 56799999999999999999999999999999999999999988 899999999999999999
Q ss_pred CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe-----------------------EEEEecC
Q psy2671 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ-----------------------CVRVLTS 337 (573)
Q Consensus 281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----------------------~~~~~~~ 337 (573)
++.+ ..+.+|...|.++.|.+. +++..+++++.||+|++||+.... ....+.+
T Consensus 193 ~~~~-~~~~~h~~~v~~l~~~~~---~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 193 GCCT-HVFEGHNSTVRCLDIVEY---KNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp TEEE-EEECCCSSCEEEEEEEES---SSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred CcEE-EEECCCCCccEEEEEecC---CCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 8765 456789999999998763 356789999999999999998754 2456778
Q ss_pred CCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671 338 HTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH 417 (573)
Q Consensus 338 h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (573)
|...+.++... ...+++++.|+.|++||++++.....+.+|...|.+++++
T Consensus 269 ~~~~v~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~---------------------------- 319 (464)
T 3v7d_B 269 HMASVRTVSGH-GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYD---------------------------- 319 (464)
T ss_dssp CSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE----------------------------
T ss_pred ccceEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEc----------------------------
Confidence 99999988644 3479999999999999999999999999999999888876
Q ss_pred hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe
Q psy2671 418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497 (573)
Q Consensus 418 ~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~ 497 (573)
|++.++++|+.||+|++||++++. .+..+.+|...|.+++|+ +++|++|+.||.|++||..+++....
T Consensus 320 ---------~~~~~l~sg~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 320 ---------HERKRCISASMDTTIRIWDLENGE-LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp ---------TTTTEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ---------CCCCEEEEEeCCCcEEEEECCCCc-EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeee
Confidence 457899999999999999998754 567788999999999998 57999999999999999998876655
Q ss_pred ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc-ccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD-LPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571 (573)
Q Consensus 498 ~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~-l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw 571 (573)
.. |...+..++|++++++|++++ |+.|++||+++++.+.. +.+|.+.|++++|+ ++..+++++.|+.+.+|
T Consensus 388 ~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 388 YH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp EE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred ec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 53 455677889999999999998 99999999999998875 77889999999998 33455566677766554
No 56
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.1e-39 Score=351.66 Aligned_cols=284 Identities=26% Similarity=0.503 Sum_probs=236.3
Q ss_pred cCCCCCCCcEEEEEEcCCC-CeEEEEeCCCeEEEEECCCC-----eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEE
Q psy2671 201 SSMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQ-----TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH 274 (573)
Q Consensus 201 ~~~~gh~~~V~~~~fsp~g-~~las~s~d~~i~iwd~~~~-----~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~ 274 (573)
..+.+|.+.|++++|+|++ ++|+||+.|++|++||+.+. .....+.+|...|.+++|+|++++|++|+.||+|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 3467999999999999875 78999999999999998763 34567889999999999999999999999999999
Q ss_pred EEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe---cCCCccEEEEEECCCc
Q psy2671 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL---TSHTRSVTCIRWGGSG 351 (573)
Q Consensus 275 vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~~h~~~v~~~~~~~~~ 351 (573)
+||+.++... ..+.+|...|.+++|.| +++++++++.|++|++||.......... .+|...|.+++|++++
T Consensus 456 vwd~~~~~~~-~~~~~h~~~v~~~~~s~-----~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 456 LWDLAAGVST-RRFVGHTKDVLSVAFSL-----DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp EEETTTTEEE-EEEECCSSCEEEEEECT-----TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred EEECCCCcce-eEEeCCCCCEEEEEEeC-----CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC
Confidence 9999988765 45679999999999977 5678999999999999998655443332 4688889999998754
Q ss_pred ---EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671 352 ---LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE 428 (573)
Q Consensus 352 ---~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (573)
.+++++.|++|++||++++.
T Consensus 530 ~~~~l~s~s~d~~v~vwd~~~~~--------------------------------------------------------- 552 (694)
T 3dm0_A 530 LQPTIVSASWDKTVKVWNLSNCK--------------------------------------------------------- 552 (694)
T ss_dssp SSCEEEEEETTSCEEEEETTTCC---------------------------------------------------------
T ss_pred CcceEEEEeCCCeEEEEECCCCc---------------------------------------------------------
Confidence 46666666666666654332
Q ss_pred CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEE
Q psy2671 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV 508 (573)
Q Consensus 429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v 508 (573)
....+.+|...|++++|+|+|++|++|+.||+|++||+++++.+..+..+ ..|.++
T Consensus 553 -----------------------~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~ 608 (694)
T 3dm0_A 553 -----------------------LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHAL 608 (694)
T ss_dssp -----------------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS-SCEEEE
T ss_pred -----------------------EEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC-CcEEEE
Confidence 22345578888999999999999999999999999999999988888754 579999
Q ss_pred EECCCCCEEEEEeCCCcEEEEeCCcccccccccCcC-------------------CCEEEEEEccCCCEEEEeeCCCcEE
Q psy2671 509 AWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG-------------------DEVYAVDWAPDGEKVASGGKDKVLR 569 (573)
Q Consensus 509 ~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~-------------------~~v~~~~~s~d~~~l~s~~~d~~i~ 569 (573)
+|+|++.+|++++ |+.|++||+++++.+..+..+. ..+++++|||||++|++|+.||+|+
T Consensus 609 ~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~ 687 (694)
T 3dm0_A 609 CFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIR 687 (694)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEE
Confidence 9999998887765 5669999999887765543221 2378999999999999999999999
Q ss_pred Ecc
Q psy2671 570 LWQ 572 (573)
Q Consensus 570 iw~ 572 (573)
+|+
T Consensus 688 iW~ 690 (694)
T 3dm0_A 688 VWG 690 (694)
T ss_dssp EEE
T ss_pred EEe
Confidence 997
No 57
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.7e-40 Score=326.61 Aligned_cols=302 Identities=19% Similarity=0.323 Sum_probs=242.8
Q ss_pred ccCCCccccEEEEEEcCCC-CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671 104 SSMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD 182 (573)
Q Consensus 104 ~~~~gH~~~V~~l~~s~~~-~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (573)
..+.+|.+.|.+++|+|++ ++||+|+.|++|+|||+.++.....
T Consensus 67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~----------------------------------- 111 (383)
T 3ei3_B 67 RTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSF----------------------------------- 111 (383)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEE-----------------------------------
T ss_pred EeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccccee-----------------------------------
Confidence 3567899999999999999 9999999999999999987654311
Q ss_pred EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCCCeeeEEec---CCCCcEEEEEEc
Q psy2671 183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCE---GHKHWVLCIAWS 258 (573)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~~~~~~~~---~h~~~V~~v~~s 258 (573)
....+|...|.+++|+| ++++|++++.|+.|++||+.+ ..+..+. +|...|.+++|+
T Consensus 112 ------------------~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~ 172 (383)
T 3ei3_B 112 ------------------IQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVS 172 (383)
T ss_dssp ------------------ECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEE
T ss_pred ------------------eecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEEC
Confidence 12347999999999999 789999999999999999986 4444444 345889999999
Q ss_pred CCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCC-EEEEEeCCCcEEEEECCC----CeEEE
Q psy2671 259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCR-RFASSGKDGAIRIWDVIL----SQCVR 333 (573)
Q Consensus 259 ~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~----~~~~~ 333 (573)
|++++|++|+.|+.|++||++ ++.+ ..+.+|...|.+++|.| +++ .+++++.|+.|++||+.. +.++.
T Consensus 173 ~~~~~l~~~~~d~~i~i~d~~-~~~~-~~~~~h~~~v~~~~~~~-----~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 245 (383)
T 3ei3_B 173 VSRQMLATGDSTGRLLLLGLD-GHEI-FKEKLHKAKVTHAEFNP-----RCDWLMATSSVDATVKLWDLRNIKDKNSYIA 245 (383)
T ss_dssp TTTTEEEEEETTSEEEEEETT-SCEE-EEEECSSSCEEEEEECS-----SCTTEEEEEETTSEEEEEEGGGCCSTTCEEE
T ss_pred CCCCEEEEECCCCCEEEEECC-CCEE-EEeccCCCcEEEEEECC-----CCCCEEEEEeCCCEEEEEeCCCCCcccceEE
Confidence 999999999999999999994 4443 45678999999999987 445 899999999999999987 55666
Q ss_pred EecCCCccEEEEEECC-Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCc
Q psy2671 334 VLTSHTRSVTCIRWGG-SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP 411 (573)
Q Consensus 334 ~~~~h~~~v~~~~~~~-~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 411 (573)
.+ +|...|.+++|++ ++ .+++++.|+.|++||++++.....+.+|......
T Consensus 246 ~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-------------------------- 298 (383)
T 3ei3_B 246 EM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQ-------------------------- 298 (383)
T ss_dssp EE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCT--------------------------
T ss_pred Ee-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccc--------------------------
Confidence 66 6999999999998 76 7999999999999999887665555444321000
Q ss_pred hhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy2671 412 EESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491 (573)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~ 491 (573)
.... + . ..|. ....+..++|+|+|++ +|+.||.|++||..+
T Consensus 299 ---------------~~~~-~-------~-~~~~-------------p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~ 339 (383)
T 3ei3_B 299 ---------------HLTP-I-------K-ATWH-------------PMYDLIVAGRYPDDQL--LLNDKRTIDIYDANS 339 (383)
T ss_dssp ---------------TSCC-C-------C-CEEC-------------SSSSEEEEECBCCTTT--CTTCCCCEEEEETTT
T ss_pred ---------------cccc-e-------E-Eecc-------------CCCCceEEEecCCccc--ccCCCCeEEEEecCC
Confidence 0000 0 0 0111 1234667899999988 899999999999999
Q ss_pred CeEEEeecC--CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Q psy2671 492 GKFITTLRG--HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533 (573)
Q Consensus 492 ~~~~~~~~~--h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~ 533 (573)
++.+..+.+ |...+.+++|+|++++|++|+ |+.|++||+++
T Consensus 340 ~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 340 GGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 999999987 456777889999999999997 99999999864
No 58
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.9e-40 Score=318.58 Aligned_cols=247 Identities=28% Similarity=0.492 Sum_probs=209.3
Q ss_pred ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183 (573)
Q Consensus 104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (573)
..+.||...|.+++|+|++++++||+.|++|+|||+.+++++..
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~------------------------------------ 117 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKS------------------------------------ 117 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE------------------------------------
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEE------------------------------------
Confidence 45789999999999999999999999999999999988755421
Q ss_pred EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe
Q psy2671 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ 263 (573)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~ 263 (573)
+.+|...+.+++|+|++++|++|+.|+.|++||+.+++....+..|...|.+++|+|+|++
T Consensus 118 -------------------~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 118 -------------------IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 178 (321)
T ss_dssp -------------------EECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSE
T ss_pred -------------------EeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCE
Confidence 2356677889999999999999999999999999999999899999999999999999999
Q ss_pred EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEE
Q psy2671 264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT 343 (573)
Q Consensus 264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~ 343 (573)
|++|+.||.|++||+++++.+ ..+.+|...|.+++|.| ++++|++++.|++|++||+..+.
T Consensus 179 lasg~~dg~i~iwd~~~~~~~-~~~~~h~~~v~~l~~sp-----d~~~l~s~s~dg~i~iwd~~~~~------------- 239 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKIYDVQHAN------------- 239 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEE-EEECCCSSCCCEEEECT-----TSCEEEEECTTSCEEEEETTTCC-------------
T ss_pred EEEEcCCCeEEEEECCCCcEE-EEEcccCCceeEEEEcC-----CCCEEEEEcCCCeEEEEECCCcc-------------
Confidence 999999999999999988765 34567777777766655 34455555555555555543221
Q ss_pred EEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhee
Q psy2671 344 CIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ 423 (573)
Q Consensus 344 ~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (573)
T Consensus 240 -------------------------------------------------------------------------------- 239 (321)
T 3ow8_A 240 -------------------------------------------------------------------------------- 239 (321)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcc
Q psy2671 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503 (573)
Q Consensus 424 ~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~ 503 (573)
....+.+|...|.+++|+|++++|++|+.|++|++||+++++++.++.+|..
T Consensus 240 ----------------------------~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~ 291 (321)
T 3ow8_A 240 ----------------------------LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQD 291 (321)
T ss_dssp ----------------------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred ----------------------------eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCC
Confidence 1123445777899999999999999999999999999999999999999999
Q ss_pred eEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMK 532 (573)
Q Consensus 504 ~v~~v~~s~dg~~las~s~D~~v~vwd~~ 532 (573)
.|++++|+|++++|++++.|++|++||..
T Consensus 292 ~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 292 QVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999999999999999963
No 59
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.6e-40 Score=329.45 Aligned_cols=245 Identities=30% Similarity=0.514 Sum_probs=215.0
Q ss_pred cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280 (573)
Q Consensus 201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~ 280 (573)
..+.||.++|++++|+|++++|++|+.|++|+|||+.+++....+.+|...|.+++|+|++++|++|+.|++|++||+.+
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCC
Q psy2671 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR 360 (573)
Q Consensus 281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~ 360 (573)
++.+ ..+.+|...|.+++|.| +++.+++++.|++|++||+.++.++
T Consensus 182 ~~~~-~~~~~h~~~V~~v~~~p-----~~~~l~s~s~D~~i~~wd~~~~~~~---------------------------- 227 (410)
T 1vyh_C 182 FECI-RTMHGHDHNVSSVSIMP-----NGDHIVSASRDKTIKMWEVQTGYCV---------------------------- 227 (410)
T ss_dssp SCEE-ECCCCCSSCEEEEEECS-----SSSEEEEEETTSEEEEEETTTCCEE----------------------------
T ss_pred Ccee-EEEcCCCCCEEEEEEeC-----CCCEEEEEeCCCeEEEEECCCCcEE----------------------------
Confidence 7765 45678888888887765 3455666666666666655433221
Q ss_pred eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCe
Q psy2671 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT 440 (573)
Q Consensus 361 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 440 (573)
T Consensus 228 -------------------------------------------------------------------------------- 227 (410)
T 1vyh_C 228 -------------------------------------------------------------------------------- 227 (410)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCC-------
Q psy2671 441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD------- 513 (573)
Q Consensus 441 i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~d------- 513 (573)
..+.+|...|.+++|+|+|++|++|+.|++|++||.++++....+.+|...|.+++|+|+
T Consensus 228 -------------~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 294 (410)
T 1vyh_C 228 -------------KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSIS 294 (410)
T ss_dssp -------------EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGG
T ss_pred -------------EEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchh
Confidence 123345667888999999999999999999999999999999999999999999999996
Q ss_pred -------------CCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 514 -------------SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 514 -------------g~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
|.+|++|+.|++|++||+++++++..+.+|.+.|.++.|+|++++|++|+.|++|++|+
T Consensus 295 ~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd 366 (410)
T 1vyh_C 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366 (410)
T ss_dssp GCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEEC
T ss_pred hhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 67899999999999999999999999999999999999999999999999999999997
No 60
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.1e-40 Score=330.20 Aligned_cols=309 Identities=18% Similarity=0.237 Sum_probs=250.0
Q ss_pred cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD 182 (573)
Q Consensus 103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (573)
...+.+|.++|++++|+| ++||+|+.||+|+|||+.++.....
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~----------------------------------- 51 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENP----------------------------------- 51 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCG-----------------------------------
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccC-----------------------------------
Confidence 346789999999999999 8999999999999999987642100
Q ss_pred EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCC----C---CeEEEEeCCCeEEEEECCCCee-----eEEecCC--
Q psy2671 183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN----G---RSLASGSGDTTVRFWDVTTQTP-----LFKCEGH-- 248 (573)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~----g---~~las~s~d~~i~iwd~~~~~~-----~~~~~~h-- 248 (573)
..+...+.+|...|.+++|+|+ + ++|++++.|+.|++||+.++.. +..+.+|
T Consensus 52 --------------~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 117 (397)
T 1sq9_A 52 --------------KDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDS 117 (397)
T ss_dssp --------------GGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCT
T ss_pred --------------CCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeeccccc
Confidence 0011234479999999999999 9 9999999999999999988776 7888888
Q ss_pred ---CCcEEEEEEc----CCCCe-EEEEeeCCeEEEEECCC------Cceec----ccc-------cCCcccEEEEEeccc
Q psy2671 249 ---KHWVLCIAWS----PDSKQ-LVSGCKNGVIHAWDSST------GKQIG----QPM-------RGHKQWITALSWEPF 303 (573)
Q Consensus 249 ---~~~V~~v~~s----~dg~~-l~sgs~dg~i~vwd~~~------~~~~~----~~~-------~~h~~~v~~~~~~~~ 303 (573)
...|.+++|+ |++++ |++++.||.|++||+.+ ++.+. ..+ ..|...|.++.|.|
T Consensus 118 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 196 (397)
T 1sq9_A 118 DMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE- 196 (397)
T ss_dssp TGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-
T ss_pred ccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECC-
Confidence 5899999999 99999 99999999999999987 54432 022 44788899999877
Q ss_pred ccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC---C---CccEEEEEECCCc-EEEEEeCC---CeEEEEeCCCCeee
Q psy2671 304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS---H---TRSVTCIRWGGSG-LIYSASQD---RTIKVWRASDGVMC 373 (573)
Q Consensus 304 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~---h---~~~v~~~~~~~~~-~l~s~s~d---~~i~vw~~~~~~~~ 373 (573)
++ .+++++.||.|++||+..++.+..+.. | ...|.+++|++++ .+++++.| +.|++||++++...
T Consensus 197 ----~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~ 271 (397)
T 1sq9_A 197 ----RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI 271 (397)
T ss_dssp ----TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred ----Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc
Confidence 45 899999999999999999999999888 8 9999999998776 68888888 89999998776544
Q ss_pred EeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccce
Q psy2671 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSL 453 (573)
Q Consensus 374 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~ 453 (573)
..+.+... +. ...
T Consensus 272 ~~~~~~~~---------------------------------------------~~----------------------~~~ 284 (397)
T 1sq9_A 272 GSLSVPTH---------------------------------------------SS----------------------QAS 284 (397)
T ss_dssp EEECBC--------------------------------------------------------------------------
T ss_pred ceeccCcc---------------------------------------------cc----------------------ccc
Confidence 33321100 00 000
Q ss_pred eeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec------CC---------------cceEEEEEECC
Q psy2671 454 ARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR------GH---------------VQAVYMVAWSS 512 (573)
Q Consensus 454 ~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~------~h---------------~~~v~~v~~s~ 512 (573)
.....|...|.+++|+|++++|++++.||.|++||.++++.+..+. +| ...|++++|+|
T Consensus 285 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~ 364 (397)
T 1sq9_A 285 LGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK 364 (397)
T ss_dssp -CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEEC
T ss_pred ccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecc
Confidence 1122377889999999999999999999999999999999999998 88 89999999999
Q ss_pred CC----------CEEEEEeCCCcEEEEeCCccc
Q psy2671 513 DS----------RLLVSGSADSTLKVWNMKTKK 535 (573)
Q Consensus 513 dg----------~~las~s~D~~v~vwd~~~~~ 535 (573)
++ ++|++++.|+.|++|++++++
T Consensus 365 ~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 365 KGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 98 799999999999999998763
No 61
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.1e-39 Score=313.95 Aligned_cols=261 Identities=23% Similarity=0.401 Sum_probs=206.0
Q ss_pred cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV 184 (573)
Q Consensus 105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (573)
.+.+|.++|.+++|+|+|++||||+.|++|+|||+.++..
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~---------------------------------------- 43 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH---------------------------------------- 43 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB----------------------------------------
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc----------------------------------------
Confidence 4678999999999999999999999999999999864321
Q ss_pred EeceeeEEEeeccccccCCCCCCCcEEEEEEcCC--CCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcCC
Q psy2671 185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN--GRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPD 260 (573)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~--g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~d 260 (573)
++..++.||.++|.+++|+|+ +++||+|+.|++|+|||+.++. .+..+.+|...|.+++|+|+
T Consensus 44 -------------~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~ 110 (297)
T 2pm7_B 44 -------------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPH 110 (297)
T ss_dssp -------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCG
T ss_pred -------------EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcC
Confidence 012345689999999999864 8999999999999999998763 56677899999999999997
Q ss_pred --CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC
Q psy2671 261 --SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSH 338 (573)
Q Consensus 261 --g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h 338 (573)
|.+|++|+.|+.|++||++++.... ...+.+|
T Consensus 111 ~~g~~l~s~s~d~~v~~wd~~~~~~~~----------------------------------------------~~~~~~h 144 (297)
T 2pm7_B 111 EYGPMLLVASSDGKVSVVEFKENGTTS----------------------------------------------PIIIDAH 144 (297)
T ss_dssp GGCSEEEEEETTSEEEEEEBCSSSCBC----------------------------------------------CEEEECC
T ss_pred CCCcEEEEEECCCcEEEEEecCCCcee----------------------------------------------eeeeecc
Confidence 8899999999999999986542110 0112345
Q ss_pred CccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418 (573)
Q Consensus 339 ~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (573)
...|.+++|++++..
T Consensus 145 ~~~v~~~~~~p~~~~----------------------------------------------------------------- 159 (297)
T 2pm7_B 145 AIGVNSASWAPATIE----------------------------------------------------------------- 159 (297)
T ss_dssp SSCEEEEEECCCC-------------------------------------------------------------------
T ss_pred cCccceEeecCCccc-----------------------------------------------------------------
Confidence 666666666543200
Q ss_pred hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe----E
Q psy2671 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK----F 494 (573)
Q Consensus 419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~----~ 494 (573)
+.+ .+ ...+++++||+|+.|++|++||.++++ .
T Consensus 160 --------~~~----------------------------~~-------~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~ 196 (297)
T 2pm7_B 160 --------EDG----------------------------EH-------NGTKESRKFVTGGADNLVKIWKYNSDAQTYVL 196 (297)
T ss_dssp -----------------------------------------------------CCEEEEEETTSCEEEEEEETTTTEEEE
T ss_pred --------ccc----------------------------cC-------CCCCCcceEEEEcCCCcEEEEEEcCCCceEEE
Confidence 000 00 012357899999999999999988765 5
Q ss_pred EEeecCCcceEEEEEECCCC---CEEEEEeCCCcEEEEeCCcccc---cccc--cCcCCCEEEEEEccCCCEEEEeeCCC
Q psy2671 495 ITTLRGHVQAVYMVAWSSDS---RLLVSGSADSTLKVWNMKTKKI---EQDL--PGHGDEVYAVDWAPDGEKVASGGKDK 566 (573)
Q Consensus 495 ~~~~~~h~~~v~~v~~s~dg---~~las~s~D~~v~vwd~~~~~~---~~~l--~~h~~~v~~~~~s~d~~~l~s~~~d~ 566 (573)
...+.+|...|.+++|+|++ ++||+++.|++|++||+++... ...+ .+|.+.|++++|+|++++|++++.|+
T Consensus 197 ~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~ 276 (297)
T 2pm7_B 197 ESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN 276 (297)
T ss_dssp EEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTS
T ss_pred EEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCC
Confidence 67889999999999999995 8999999999999999976431 1222 57888999999999999999999999
Q ss_pred cEEEcc
Q psy2671 567 VLRLWQ 572 (573)
Q Consensus 567 ~i~iw~ 572 (573)
+|++|+
T Consensus 277 ~v~lw~ 282 (297)
T 2pm7_B 277 KVTLWK 282 (297)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 999996
No 62
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-39 Score=311.75 Aligned_cols=289 Identities=20% Similarity=0.375 Sum_probs=242.4
Q ss_pred ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV 181 (573)
Q Consensus 102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (573)
+...+.+|.++|++++| |++++||+|+.||+|+|||+.++....
T Consensus 10 ~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~----------------------------------- 53 (313)
T 3odt_A 10 LSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGT----------------------------------- 53 (313)
T ss_dssp EEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEE-----------------------------------
T ss_pred HHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEE-----------------------------------
Confidence 44567899999999999 999999999999999999997654321
Q ss_pred EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC---eeeEEecCCCCcEEEEEEc
Q psy2671 182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ---TPLFKCEGHKHWVLCIAWS 258 (573)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~---~~~~~~~~h~~~V~~v~~s 258 (573)
.+.+|...|.+++|+|++++|++|+.|+.|++|++... +.+..+.+|...|.+++|
T Consensus 54 --------------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~- 112 (313)
T 3odt_A 54 --------------------VVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF- 112 (313)
T ss_dssp --------------------EEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE-
T ss_pred --------------------EeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe-
Confidence 12358899999999999999999999999999998654 556778899999999999
Q ss_pred CCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC-
Q psy2671 259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS- 337 (573)
Q Consensus 259 ~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~- 337 (573)
++++|++++.||.|++|| .+... ..+..|...+.++.|.|. +++.+++++.||.|++|| ..+....+..
T Consensus 113 -~~~~l~~~~~d~~i~~~d--~~~~~-~~~~~~~~~v~~~~~~~~----~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~ 182 (313)
T 3odt_A 113 -QDGVVISGSWDKTAKVWK--EGSLV-YNLQAHNASVWDAKVVSF----SENKFLTASADKTIKLWQ--NDKVIKTFSGI 182 (313)
T ss_dssp -ETTEEEEEETTSEEEEEE--TTEEE-EEEECCSSCEEEEEEEET----TTTEEEEEETTSCEEEEE--TTEEEEEECSS
T ss_pred -cCCEEEEEeCCCCEEEEc--CCcEE-EecccCCCceeEEEEccC----CCCEEEEEECCCCEEEEe--cCceEEEEecc
Confidence 577999999999999999 33332 456789999999998763 467899999999999999 4566666666
Q ss_pred CCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671 338 HTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH 417 (573)
Q Consensus 338 h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (573)
|...+.+++|++++.+++++.|+.|++||++++..
T Consensus 183 ~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~--------------------------------------------- 217 (313)
T 3odt_A 183 HNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDV--------------------------------------------- 217 (313)
T ss_dssp CSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCE---------------------------------------------
T ss_pred CcccEEEEEEcCCCeEEEccCCCeEEEEECCchhh---------------------------------------------
Confidence 88999999998877788888888888888765432
Q ss_pred hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe
Q psy2671 418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497 (573)
Q Consensus 418 ~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~ 497 (573)
+..+.+|...|.+++|+|++ .|++++.||.|++||.++++.+..
T Consensus 218 -----------------------------------~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~ 261 (313)
T 3odt_A 218 -----------------------------------LRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQV 261 (313)
T ss_dssp -----------------------------------EEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEE
T ss_pred -----------------------------------hhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEE
Confidence 22334567789999999999 588999999999999999999999
Q ss_pred ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc
Q psy2671 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD 539 (573)
Q Consensus 498 ~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~ 539 (573)
+..|...|.+++|+|+++ +++++.|+.|++||+++++....
T Consensus 262 ~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 262 ITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp EECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred EeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 999999999999999998 55789999999999998876543
No 63
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-39 Score=311.50 Aligned_cols=279 Identities=23% Similarity=0.356 Sum_probs=226.8
Q ss_pred cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280 (573)
Q Consensus 201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~ 280 (573)
..+.+|.+.|.+++| |++++|++|+.||.|++||+.++.....+..|...|.+++|+|++++|++|+.||.|++|++..
T Consensus 12 ~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 90 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFA 90 (313)
T ss_dssp EEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTC
T ss_pred HHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeee
Confidence 457799999999999 9999999999999999999999988888899999999999999999999999999999999876
Q ss_pred Cce--ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeC
Q psy2671 281 GKQ--IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ 358 (573)
Q Consensus 281 ~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~ 358 (573)
... ....+.+|...|.++.|. ++.+++++.||.|++|| .++....+..|...+.++.|.+
T Consensus 91 ~~~~~~~~~~~~~~~~i~~~~~~-------~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~--------- 152 (313)
T 3odt_A 91 TSGEDPLYTLIGHQGNVCSLSFQ-------DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVS--------- 152 (313)
T ss_dssp CTTSCC-CEECCCSSCEEEEEEE-------TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEE---------
T ss_pred cCCCCcccchhhcccCEEEEEec-------CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEcc---------
Confidence 431 123345666777777662 34667777777777777 4455555566666666655533
Q ss_pred CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD 438 (573)
Q Consensus 359 d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 438 (573)
+++..+++++.|
T Consensus 153 --------------------------------------------------------------------~~~~~l~~~~~d 164 (313)
T 3odt_A 153 --------------------------------------------------------------------FSENKFLTASAD 164 (313)
T ss_dssp --------------------------------------------------------------------TTTTEEEEEETT
T ss_pred --------------------------------------------------------------------CCCCEEEEEECC
Confidence 123445555555
Q ss_pred CeEEEEcCCCCccceeeecc-ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEE
Q psy2671 439 FTLFLWNPEKEKKSLARMTG-HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLL 517 (573)
Q Consensus 439 g~i~lwd~~~~~~~~~~~~~-h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~l 517 (573)
+.+++||.. .....+.. |...|.+++|+|++. +++++.||.|++||.++++.+..+.+|...|++++|+|++ .|
T Consensus 165 ~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l 239 (313)
T 3odt_A 165 KTIKLWQND---KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DI 239 (313)
T ss_dssp SCEEEEETT---EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CE
T ss_pred CCEEEEecC---ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CE
Confidence 555555521 12233333 778899999999998 9999999999999999999999999999999999999999 68
Q ss_pred EEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 518 VSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 518 as~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
++++.|+.|++||+++++....+..|...|.+++|+|+++ +++++.|+.|++|+
T Consensus 240 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 240 VSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFS 293 (313)
T ss_dssp EEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEE
T ss_pred EEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEe
Confidence 8999999999999999999999999999999999999998 67799999999997
No 64
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=322.48 Aligned_cols=299 Identities=17% Similarity=0.289 Sum_probs=237.1
Q ss_pred CCCccccEEEEEEcCCCCe-eEEeeC---CCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671 106 MPGHAEAVISVKFSPNGRS-LASGSG---DTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV 181 (573)
Q Consensus 106 ~~gH~~~V~~l~~s~~~~~-lat~s~---D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (573)
+.+|.+.|.+++|+|+++. +++|+. |++|+|||+.+++....
T Consensus 14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~---------------------------------- 59 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLL---------------------------------- 59 (357)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEE----------------------------------
T ss_pred ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccce----------------------------------
Confidence 4579999999999999964 556665 99999999987653210
Q ss_pred EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCC---CCeEEEEeCCCeEEEEECCCCe-eeEEecCCCCcEEEEE-
Q psy2671 182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN---GRSLASGSGDTTVRFWDVTTQT-PLFKCEGHKHWVLCIA- 256 (573)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~---g~~las~s~d~~i~iwd~~~~~-~~~~~~~h~~~V~~v~- 256 (573)
...+|...|.+++|+|+ +++|++|+.|+.|++||+.+++ ++..+.+|...|.+++
T Consensus 60 --------------------~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 119 (357)
T 3i2n_A 60 --------------------REIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDG 119 (357)
T ss_dssp --------------------EEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEE
T ss_pred --------------------eeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEee
Confidence 01157889999999998 6999999999999999999887 8888999999999995
Q ss_pred -----EcCCCCeEEEEeeCCeEEEEECCCCceecccccCCc----ccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC
Q psy2671 257 -----WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHK----QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI 327 (573)
Q Consensus 257 -----~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 327 (573)
|+|++++|++++.||.|++||+.++......+..|. ..+.++.|.+. ++++++.+++++.||.|++||+.
T Consensus 120 ~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~l~~~~~d~~i~i~d~~ 198 (357)
T 3i2n_A 120 IGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNA-YNQEERVVCAGYDNGDIKLFDLR 198 (357)
T ss_dssp ESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECC-CC-CCCEEEEEETTSEEEEEETT
T ss_pred ccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEec-cCCCCCEEEEEccCCeEEEEECc
Confidence 578999999999999999999998763333333333 37888886542 23467899999999999999999
Q ss_pred CCeEEEEecCCCccEEEEEECC---C-cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCc
Q psy2671 328 LSQCVRVLTSHTRSVTCIRWGG---S-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG 403 (573)
Q Consensus 328 ~~~~~~~~~~h~~~v~~~~~~~---~-~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~ 403 (573)
.++... ...|...|.+++|++ + ..+++++.|+.|++||++++.....
T Consensus 199 ~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~---------------------------- 249 (357)
T 3i2n_A 199 NMALRW-ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG---------------------------- 249 (357)
T ss_dssp TTEEEE-EEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE----------------------------
T ss_pred cCceee-ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc----------------------------
Confidence 887644 466888999999986 4 4678888888888887653221100
Q ss_pred eeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEEeeCCC
Q psy2671 404 FKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASASFDK 482 (573)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las~s~dg 482 (573)
.......+|...|++++|+|+++ +|++|+.||
T Consensus 250 -----------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 282 (357)
T 3i2n_A 250 -----------------------------------------------FASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG 282 (357)
T ss_dssp -----------------------------------------------EEEEEEECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred -----------------------------------------------eeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC
Confidence 00112346788899999999998 899999999
Q ss_pred cEEEEeCCCC-------------------eEEEeecCCcceEEEEEECCCCCEEE-EEeCCCcEEEEeCCccc
Q psy2671 483 SIKLWDGRIG-------------------KFITTLRGHVQAVYMVAWSSDSRLLV-SGSADSTLKVWNMKTKK 535 (573)
Q Consensus 483 ~i~lwd~~~~-------------------~~~~~~~~h~~~v~~v~~s~dg~~la-s~s~D~~v~vwd~~~~~ 535 (573)
.|++||.+.+ +.+..+.+|...|++++|+|++++|+ +++.|+.|++||+.+.+
T Consensus 283 ~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 283 GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred cEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 9999998643 46777889999999999999999998 89999999999997654
No 65
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.4e-39 Score=327.10 Aligned_cols=289 Identities=20% Similarity=0.281 Sum_probs=236.5
Q ss_pred cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe------eeEEecCCCCcEEEEEEcCC----C---CeEEEE
Q psy2671 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT------PLFKCEGHKHWVLCIAWSPD----S---KQLVSG 267 (573)
Q Consensus 201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~------~~~~~~~h~~~V~~v~~s~d----g---~~l~sg 267 (573)
..+.+|.+.|++++|+| ++|++|+.|++|++||+.+++ .+..+.+|...|.+++|+|+ + ++|+++
T Consensus 10 ~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE
Confidence 45789999999999999 799999999999999999887 67888899999999999999 9 999999
Q ss_pred eeCCeEEEEECCCCce----ecccccCC-----cccEEEEEecccccCCCCCE-EEEEeCCCcEEEEECCC------CeE
Q psy2671 268 CKNGVIHAWDSSTGKQ----IGQPMRGH-----KQWITALSWEPFHLNHQCRR-FASSGKDGAIRIWDVIL------SQC 331 (573)
Q Consensus 268 s~dg~i~vwd~~~~~~----~~~~~~~h-----~~~v~~~~~~~~~~~~~~~~-l~s~~~dg~v~iwd~~~------~~~ 331 (573)
+.||.|++||+.++.. ....+.+| ...|.++.|.+.. .++++. +++++.||.|++||+.. ++.
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN-DRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc-CCCCceEEEEEeCCCcEEEEeCCccccccccce
Confidence 9999999999987764 12345667 5899999998210 025678 99999999999999877 444
Q ss_pred EE-----Ee-------cCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEc
Q psy2671 332 VR-----VL-------TSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT 399 (573)
Q Consensus 332 ~~-----~~-------~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~ 399 (573)
+. .+ ..|...|.+++|++++.+++++.|+.|++||++++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---------------------------- 218 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLR---------------------------- 218 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTE----------------------------
T ss_pred eeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCc----------------------------
Confidence 33 33 235555555555544444444455555555544332
Q ss_pred CCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc---c---cccEEEEEECCCCC
Q psy2671 400 STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG---H---QQLINCVEFSPDGR 473 (573)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~---h---~~~v~~v~~sp~g~ 473 (573)
.+..+.. | ...|.+++|+|+++
T Consensus 219 ----------------------------------------------------~~~~~~~~~~h~~~~~~i~~i~~~~~~~ 246 (397)
T 1sq9_A 219 ----------------------------------------------------PLYNFESQHSMINNSNSIRSVKFSPQGS 246 (397)
T ss_dssp ----------------------------------------------------EEEEEECCC---CCCCCEEEEEECSSTT
T ss_pred ----------------------------------------------------eeEEEeccccccccCCccceEEECCCCC
Confidence 2333344 6 77899999999999
Q ss_pred EEEEeeCC---CcEEEEeCCCCeEEEeecC-------------CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc
Q psy2671 474 IIASASFD---KSIKLWDGRIGKFITTLRG-------------HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE 537 (573)
Q Consensus 474 ~las~s~d---g~i~lwd~~~~~~~~~~~~-------------h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~ 537 (573)
+|++++.| |.|++||.++++.+..+.+ |...|.+++|+|++++|++++.|+.|++||+++++.+
T Consensus 247 ~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 247 LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERI 326 (397)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCcee
Confidence 99999999 9999999999999999998 9999999999999999999999999999999999988
Q ss_pred cccc------Cc---------------CCCEEEEEEccCC----------CEEEEeeCCCcEEEcc
Q psy2671 538 QDLP------GH---------------GDEVYAVDWAPDG----------EKVASGGKDKVLRLWQ 572 (573)
Q Consensus 538 ~~l~------~h---------------~~~v~~~~~s~d~----------~~l~s~~~d~~i~iw~ 572 (573)
..+. +| ...|++++|+|++ ++|++++.|+.|++|+
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 327 TTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp EEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred EEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 8888 78 9999999999998 7999999999999997
No 66
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.2e-40 Score=334.77 Aligned_cols=309 Identities=18% Similarity=0.259 Sum_probs=234.2
Q ss_pred cCCCccccEEEEEEcC-CCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671 105 SMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183 (573)
Q Consensus 105 ~~~gH~~~V~~l~~s~-~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (573)
...+|...|+||+||| ++++||+|+.||+|+|||+.++....
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~------------------------------------- 156 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPT------------------------------------- 156 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCE-------------------------------------
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCcee-------------------------------------
Confidence 3456899999999999 56799999999999999998664221
Q ss_pred EEeceeeEEEeeccccccCCCCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCCCeeeEEec--CCCCcEEEEEEcCC
Q psy2671 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCE--GHKHWVLCIAWSPD 260 (573)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~~~~~~~~--~h~~~V~~v~~s~d 260 (573)
...+.||.+.|++++|+| ++.+|++|+.|++|++||++++....... .+...+.+++|+|+
T Consensus 157 ----------------~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (435)
T 4e54_B 157 ----------------FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSAS 220 (435)
T ss_dssp ----------------EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETT
T ss_pred ----------------EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCC
Confidence 123568999999999998 68899999999999999998765433333 34456889999999
Q ss_pred CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEE---EecC
Q psy2671 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVR---VLTS 337 (573)
Q Consensus 261 g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~---~~~~ 337 (573)
+++|++|+.||.|++||++.. .+ ..+.+|...|.+++|.|. ....+++++.|++|++||+...+... ...+
T Consensus 221 ~~~l~~g~~dg~i~~wd~~~~-~~-~~~~~h~~~v~~v~~~p~----~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~ 294 (435)
T 4e54_B 221 SRMVVTGDNVGNVILLNMDGK-EL-WNLRMHKKKVTHVALNPC----CDWFLATASVDQTVKIWDLRQVRGKASFLYSLP 294 (435)
T ss_dssp TTEEEEECSSSBEEEEESSSC-BC-CCSBCCSSCEEEEEECTT----CSSEEEEEETTSBCCEEETTTCCSSSCCSBCCB
T ss_pred CCEEEEEeCCCcEeeeccCcc-ee-EEEecccceEEeeeecCC----CceEEEEecCcceeeEEecccccccceEEEeee
Confidence 999999999999999998653 33 457899999999999873 23478899999999999998765433 3357
Q ss_pred CCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhh
Q psy2671 338 HTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK 416 (573)
Q Consensus 338 h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (573)
|...|.+++|++++ .|++++.|++|++|++.++.....+.+|...... .
T Consensus 295 h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~--------------------~---------- 344 (435)
T 4e54_B 295 HRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQ--------------------H---------- 344 (435)
T ss_dssp CSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCS--------------------S----------
T ss_pred ccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccc--------------------c----------
Confidence 99999999999887 7999999999999999988766655554321000 0
Q ss_pred hhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee-CCCcEEEEeCCCCeEE
Q psy2671 417 HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS-FDKSIKLWDGRIGKFI 495 (573)
Q Consensus 417 ~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s-~dg~i~lwd~~~~~~~ 495 (573)
...+ -..|. ....+..+.+++++..+++++ .++.|++||..+++.+
T Consensus 345 ------------~~~~--------~~~~~-------------~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~ 391 (435)
T 4e54_B 345 ------------LTPI--------KAAWH-------------PRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMM 391 (435)
T ss_dssp ------------SCCC--------BCEEC-------------SSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEE
T ss_pred ------------ceeE--------EEEEc-------------CCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEE
Confidence 0000 00111 112234456667766655544 4568999999999988
Q ss_pred Eeec-CCcceEEEE-EECCCCCEEEEEeCCCcEEEEeCCcccc
Q psy2671 496 TTLR-GHVQAVYMV-AWSSDSRLLVSGSADSTLKVWNMKTKKI 536 (573)
Q Consensus 496 ~~~~-~h~~~v~~v-~~s~dg~~las~s~D~~v~vwd~~~~~~ 536 (573)
..+. +|...|.++ +|+|+|++||+|+ |++|+||++++++.
T Consensus 392 ~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 392 CQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp EEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred EEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 8765 677888887 6999999999876 78999999988764
No 67
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.1e-39 Score=323.66 Aligned_cols=304 Identities=19% Similarity=0.318 Sum_probs=240.4
Q ss_pred CCCccccEEEEEEcCC----CCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671 106 MPGHAEAVISVKFSPN----GRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV 181 (573)
Q Consensus 106 ~~gH~~~V~~l~~s~~----~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (573)
+.+|.++|++++|+|+ ...+++++.++.|+|||+.++..+.....
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~------------------------------- 62 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQS------------------------------- 62 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEE-------------------------------
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeee-------------------------------
Confidence 4589999999999984 55677777778999999987654321110
Q ss_pred EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCC----CCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEE
Q psy2671 182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN----GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW 257 (573)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~----g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~ 257 (573)
.....|...|.+++|+|+ +++|++|+.|+.|++||+.+++.+..+.+|...|.+++|
T Consensus 63 -------------------~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 123 (366)
T 3k26_A 63 -------------------YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKF 123 (366)
T ss_dssp -------------------EECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEE
T ss_pred -------------------ccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEE
Confidence 112347889999999999 679999999999999999999999999999999999999
Q ss_pred cC-CCCeEEEEeeCCeEEEEECCCCceeccc--ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q psy2671 258 SP-DSKQLVSGCKNGVIHAWDSSTGKQIGQP--MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV 334 (573)
Q Consensus 258 s~-dg~~l~sgs~dg~i~vwd~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 334 (573)
+| ++.+|++|+.||.|++||+++++.+... +.+|...|.++.|.| +++++++++.||.|++||+..++....
T Consensus 124 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~dg~i~i~d~~~~~~~~~ 198 (366)
T 3k26_A 124 HPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL-----LGEKIMSCGMDHSLKLWRINSKRMMNA 198 (366)
T ss_dssp CSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT-----TSSEEEEEETTSCEEEEESCSHHHHHH
T ss_pred CCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC-----CCCEEEEecCCCCEEEEECCCCccccc
Confidence 99 9999999999999999999988765432 268999999999987 567999999999999999987654433
Q ss_pred ec----------------------------CCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEe-ccCCcceeeE
Q psy2671 335 LT----------------------------SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRT-LEGHAHWVNT 385 (573)
Q Consensus 335 ~~----------------------------~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~-~~~~~~~v~~ 385 (573)
+. .|...|.+++|+ ...+++++.|+.|++||+.++..... +..+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~------ 271 (366)
T 3k26_A 199 IKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPS------ 271 (366)
T ss_dssp HHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTT------
T ss_pred cceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccC------
Confidence 32 267777777776 44677777777777777654321100 0000
Q ss_pred EEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEE
Q psy2671 386 LALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINC 465 (573)
Q Consensus 386 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~ 465 (573)
......+..+.+|...|.+
T Consensus 272 -------------------------------------------------------------~~~~~~~~~~~~~~~~v~~ 290 (366)
T 3k26_A 272 -------------------------------------------------------------ESNVTILGRFDYSQCDIWY 290 (366)
T ss_dssp -------------------------------------------------------------CCCEEEEEEEECSSCCSSC
T ss_pred -------------------------------------------------------------CcchheeccccccCCcEEE
Confidence 0001224456678888999
Q ss_pred EEECCC--CCEEEEeeCCCcEEEEeCCCCe----EEEeecCC--cceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671 466 VEFSPD--GRIIASASFDKSIKLWDGRIGK----FITTLRGH--VQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532 (573)
Q Consensus 466 v~~sp~--g~~las~s~dg~i~lwd~~~~~----~~~~~~~h--~~~v~~v~~s~dg~~las~s~D~~v~vwd~~ 532 (573)
++|+|+ +++|++|+.||.|++||..+++ ....+.+| ...|++++|+|++++|++++.|+.|++||+.
T Consensus 291 ~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 291 MRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 999999 9999999999999999999875 44577777 7899999999999999999999999999985
No 68
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.5e-38 Score=320.27 Aligned_cols=298 Identities=23% Similarity=0.418 Sum_probs=235.2
Q ss_pred EEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEE
Q psy2671 113 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQ 192 (573)
Q Consensus 113 V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (573)
+..|+||++ ++||+| .|++|+|||..+++++..
T Consensus 108 ~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~--------------------------------------------- 140 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQL--------------------------------------------- 140 (420)
T ss_dssp CBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEE---------------------------------------------
T ss_pred ceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEE---------------------------------------------
Confidence 567899975 577766 499999999998865421
Q ss_pred EeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCe
Q psy2671 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV 272 (573)
Q Consensus 193 ~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~ 272 (573)
..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.+++.+..+.+|...+.+++|+ +..|++|+.|+.
T Consensus 141 --------~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~ 210 (420)
T 4gga_A 141 --------LQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGH 210 (420)
T ss_dssp --------EECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSE
T ss_pred --------EEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCc
Confidence 1245788999999999999999999999999999999999999999999999998875 679999999999
Q ss_pred EEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe----EEEEecCCCccEEEEEEC
Q psy2671 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ----CVRVLTSHTRSVTCIRWG 348 (573)
Q Consensus 273 i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~----~~~~~~~h~~~v~~~~~~ 348 (573)
+++||..........+.+|...+..+.|.| +++.+++++.|+.+++|+...++ .+.....|...|.+++|+
T Consensus 211 i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~-----~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~ 285 (420)
T 4gga_A 211 IHHHDVRVAEHHVATLSGHSQEVCGLRWAP-----DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWC 285 (420)
T ss_dssp EEEEETTSSSCEEEEEECCSSCEEEEEECT-----TSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEEC
T ss_pred eeEeeecccceeeEEecccccceeeeeecC-----CCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeC
Confidence 999999887666566789999999999876 56899999999999999997654 345667899999999998
Q ss_pred CCc--EEEE--EeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheee
Q psy2671 349 GSG--LIYS--ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA 424 (573)
Q Consensus 349 ~~~--~l~s--~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (573)
+.+ .+++ |+.|++|++||+.++.....
T Consensus 286 p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~------------------------------------------------- 316 (420)
T 4gga_A 286 PWQSNVLATGGGTSDRHIRIWNVCSGACLSA------------------------------------------------- 316 (420)
T ss_dssp TTCTTEEEEEECTTTCEEEEEETTTTEEEEE-------------------------------------------------
T ss_pred CCcccEEEEEeecCCCEEEEEeCCcccccee-------------------------------------------------
Confidence 653 4443 34677777777765543221
Q ss_pred eCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee--CCCcEEEEeCCCCeEEEeecCCc
Q psy2671 425 QCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS--FDKSIKLWDGRIGKFITTLRGHV 502 (573)
Q Consensus 425 ~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s--~dg~i~lwd~~~~~~~~~~~~h~ 502 (573)
+.. ...+.++.|+|+++.+++++ .|+.|++||..+++.+.++.+|.
T Consensus 317 -------------------------------~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~ 364 (420)
T 4gga_A 317 -------------------------------VDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT 364 (420)
T ss_dssp -------------------------------EEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS
T ss_pred -------------------------------ecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCC
Confidence 111 23578889999999888765 79999999999999999999999
Q ss_pred ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEc
Q psy2671 503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA 553 (573)
Q Consensus 503 ~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s 553 (573)
..|++++|+|||++||||+.|++|+|||+......+....+...+....+.
T Consensus 365 ~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s~~ 415 (420)
T 4gga_A 365 SRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAAKSSLI 415 (420)
T ss_dssp SCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC----------------
T ss_pred CCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCccccccC
Confidence 999999999999999999999999999998766655555555444444443
No 69
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.1e-39 Score=320.46 Aligned_cols=299 Identities=16% Similarity=0.252 Sum_probs=247.5
Q ss_pred CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCc
Q psy2671 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282 (573)
Q Consensus 205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~ 282 (573)
.|.++|.+++|+|++++|++|+.|+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.||.|++||+++++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 588999999999999999999999999999999887 788889999999999999999999999999999999998876
Q ss_pred eec-ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe----EEEEecCCCccEEEEEECCCc-EEEEE
Q psy2671 283 QIG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ----CVRVLTSHTRSVTCIRWGGSG-LIYSA 356 (573)
Q Consensus 283 ~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~-~l~s~ 356 (573)
... ....+|...|.++.|.| +++++++++.||.|++||+.... .......|...|.+++|++++ .++++
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAP-----NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECT-----TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred eeeeEEeecCCCceeEEEECC-----CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 332 23467889999999976 56799999999999999998765 233346789999999999876 78899
Q ss_pred eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671 357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS 436 (573)
Q Consensus 357 s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~ 436 (573)
+.|+.|++||++.........
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~----------------------------------------------------------- 181 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPA----------------------------------------------------------- 181 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCC-----------------------------------------------------------
T ss_pred cCCCCEEEEEccccccccccc-----------------------------------------------------------
Confidence 999999999976432100000
Q ss_pred CCCeEEEEcC-CCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCC
Q psy2671 437 DDFTLFLWNP-EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR 515 (573)
Q Consensus 437 ~dg~i~lwd~-~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~ 515 (573)
...|.. .........+.+|...|.+++|+|++++|++++.||.|++||.++++.+..+..|...|.+++|+|+++
T Consensus 182 ----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 257 (372)
T 1k8k_C 182 ----PTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESS 257 (372)
T ss_dssp ----CBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTE
T ss_pred ----ccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCC
Confidence 000110 011233445567888999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCcEEEEeCCc--cc--------------------------------cc------ccc-cCcCCCEEEEEEc-
Q psy2671 516 LLVSGSADSTLKVWNMKT--KK--------------------------------IE------QDL-PGHGDEVYAVDWA- 553 (573)
Q Consensus 516 ~las~s~D~~v~vwd~~~--~~--------------------------------~~------~~l-~~h~~~v~~~~~s- 553 (573)
+|+++ .|+.|++|++.. ++ .. ..+ .+|.+.|++++|+
T Consensus 258 ~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 336 (372)
T 1k8k_C 258 LVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLS 336 (372)
T ss_dssp EEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEE
T ss_pred EEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEec
Confidence 98887 899999999977 32 00 233 4899999999977
Q ss_pred cCC---CEEEEeeCCCcEEEcc
Q psy2671 554 PDG---EKVASGGKDKVLRLWQ 572 (573)
Q Consensus 554 ~d~---~~l~s~~~d~~i~iw~ 572 (573)
++| ++|+|++.||.|++|+
T Consensus 337 ~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 337 GGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp STTTSCSEEEEEETTSEEEEEE
T ss_pred CCCcceeeEEEecCCCceEEEE
Confidence 566 8999999999999997
No 70
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.8e-39 Score=321.65 Aligned_cols=291 Identities=15% Similarity=0.256 Sum_probs=229.2
Q ss_pred CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK 187 (573)
Q Consensus 108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
.|.++|++++|+|++++||+|+.|+.|+|||+.+++..
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~------------------------------------------ 43 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWV------------------------------------------ 43 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEE------------------------------------------
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEE------------------------------------------
Confidence 49999999999999999999999999999998765310
Q ss_pred eeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee--EEecCCCCcEEEEEEcCCCCeEE
Q psy2671 188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL--FKCEGHKHWVLCIAWSPDSKQLV 265 (573)
Q Consensus 188 ~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~--~~~~~h~~~V~~v~~s~dg~~l~ 265 (573)
+...+.+|...|.+++|+|++++|++++.|+.|++||+.+++.. ..+.+|...|.+++|+|++++|+
T Consensus 44 -----------~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 112 (372)
T 1k8k_C 44 -----------QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFA 112 (372)
T ss_dssp -----------EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEE
T ss_pred -----------eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEE
Confidence 01234579999999999999999999999999999999887643 34578999999999999999999
Q ss_pred EEeeCCeEEEEECCCCce---ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC---------------
Q psy2671 266 SGCKNGVIHAWDSSTGKQ---IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI--------------- 327 (573)
Q Consensus 266 sgs~dg~i~vwd~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~--------------- 327 (573)
+++.|+.|++||++.+.. ......+|...|.++.|.| +++++++++.||.|++||+.
T Consensus 113 ~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~ 187 (372)
T 1k8k_C 113 VGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP-----NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGS 187 (372)
T ss_dssp EEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT-----TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBS
T ss_pred EEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC-----CCCEEEEEcCCCCEEEEEccccccccccccccccc
Confidence 999999999999988763 2334467899999999987 56789999999999999964
Q ss_pred ---CCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCce
Q psy2671 328 ---LSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF 404 (573)
Q Consensus 328 ---~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~ 404 (573)
.++.+..+..|...|.+++|+++
T Consensus 188 ~~~~~~~~~~~~~~~~~v~~~~~~~~------------------------------------------------------ 213 (372)
T 1k8k_C 188 KMPFGELMFESSSSCGWVHGVCFSAN------------------------------------------------------ 213 (372)
T ss_dssp CCCTTCEEEECCCCSSCEEEEEECSS------------------------------------------------------
T ss_pred ccchhhheEecCCCCCeEEEEEECCC------------------------------------------------------
Confidence 33444444455555555555443
Q ss_pred eeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcE
Q psy2671 405 KYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI 484 (573)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i 484 (573)
+.++++++.|+.|++||+++.. .+..+..|...|.+++|+|+++++++| .|+.|
T Consensus 214 ------------------------~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i 267 (372)
T 1k8k_C 214 ------------------------GSRVAWVSHDSTVCLADADKKM-AVATLASETLPLLAVTFITESSLVAAG-HDCFP 267 (372)
T ss_dssp ------------------------SSEEEEEETTTEEEEEEGGGTT-EEEEEECSSCCEEEEEEEETTEEEEEE-TTSSC
T ss_pred ------------------------CCEEEEEeCCCEEEEEECCCCc-eeEEEccCCCCeEEEEEecCCCEEEEE-eCCeE
Confidence 4455555555555555554332 344556677789999999999988888 89999
Q ss_pred EEEeCCC--CeE--------------------------------E------Eee-cCCcceEEEEEEC-CCC---CEEEE
Q psy2671 485 KLWDGRI--GKF--------------------------------I------TTL-RGHVQAVYMVAWS-SDS---RLLVS 519 (573)
Q Consensus 485 ~lwd~~~--~~~--------------------------------~------~~~-~~h~~~v~~v~~s-~dg---~~las 519 (573)
++||.+. ++. . ..+ .+|...|++++|+ ++| ++|++
T Consensus 268 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s 347 (372)
T 1k8k_C 268 VLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCT 347 (372)
T ss_dssp EEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEE
T ss_pred EEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEE
Confidence 9999877 421 0 233 4899999999966 677 99999
Q ss_pred EeCCCcEEEEeCCcccc
Q psy2671 520 GSADSTLKVWNMKTKKI 536 (573)
Q Consensus 520 ~s~D~~v~vwd~~~~~~ 536 (573)
|+.||.|++|++.+++.
T Consensus 348 ~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 348 TGMDGGMSIWDVRSLES 364 (372)
T ss_dssp EETTSEEEEEEHHHHHH
T ss_pred ecCCCceEEEEecChhH
Confidence 99999999999987653
No 71
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.6e-39 Score=321.71 Aligned_cols=285 Identities=16% Similarity=0.240 Sum_probs=233.9
Q ss_pred CCCCCCCcEEEEEEcCCC-CeEEEEeCCCeEEEEECCCCeeeEEec--CCCCcEEEEEEcC-CCCeEEEEeeCCeEEEEE
Q psy2671 202 SMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKCE--GHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWD 277 (573)
Q Consensus 202 ~~~gh~~~V~~~~fsp~g-~~las~s~d~~i~iwd~~~~~~~~~~~--~h~~~V~~v~~s~-dg~~l~sgs~dg~i~vwd 277 (573)
.+.+|.+.|.+++|+|++ ++|++|+.|++|+|||+.+++....+. +|...|.+++|+| ++++|++++.|+.|++||
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 457899999999999999 999999999999999999877665554 7999999999999 789999999999999999
Q ss_pred CCCCceec-ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc--EEE
Q psy2671 278 SSTGKQIG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIY 354 (573)
Q Consensus 278 ~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~ 354 (573)
+++..... ....+|...|.+++|.| +++.+++++.|+.|++||+ .++++..+.+|...|.+++|++++ .++
T Consensus 148 ~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 148 FSGSVIQVFAKTDSWDYWYCCVDVSV-----SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMA 221 (383)
T ss_dssp TTSCEEEEEECCCCSSCCEEEEEEET-----TTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEE
T ss_pred CCCCceEEEeccCCCCCCeEEEEECC-----CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEE
Confidence 98643211 12234558899999977 5679999999999999998 577788888999999999998775 577
Q ss_pred EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE
Q psy2671 355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS 434 (573)
Q Consensus 355 s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 434 (573)
+++.|++|++||++++..
T Consensus 222 s~~~d~~i~iwd~~~~~~-------------------------------------------------------------- 239 (383)
T 3ei3_B 222 TSSVDATVKLWDLRNIKD-------------------------------------------------------------- 239 (383)
T ss_dssp EEETTSEEEEEEGGGCCS--------------------------------------------------------------
T ss_pred EEeCCCEEEEEeCCCCCc--------------------------------------------------------------
Confidence 888888888887654210
Q ss_pred EeCCCeEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc-----------
Q psy2671 435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGKFITTLRGHV----------- 502 (573)
Q Consensus 435 g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~----------- 502 (573)
....+.. .+|...|.+++|+| ++++|++++.|+.|++||.++++.+..+.+|.
T Consensus 240 --------------~~~~~~~-~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (383)
T 3ei3_B 240 --------------KNSYIAE-MPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK 304 (383)
T ss_dssp --------------TTCEEEE-EECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCC
T ss_pred --------------ccceEEE-ecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceE
Confidence 0011112 25778899999999 99999999999999999999887666665442
Q ss_pred ------ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccC--cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 503 ------QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG--HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 503 ------~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~--h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
..+..++|+|||++ +++.|+.|++||+.+++.+..+.+ |...+..++|+|++++|++++ |+.|++|+
T Consensus 305 ~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~ 379 (383)
T 3ei3_B 305 ATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWN 379 (383)
T ss_dssp CEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEE
T ss_pred EeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEe
Confidence 23455777788877 788999999999999999888877 557788889999999999997 99999997
No 72
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=323.44 Aligned_cols=328 Identities=19% Similarity=0.319 Sum_probs=235.8
Q ss_pred CCCCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCCCeeeEEe-------------cCCCCcEEEEEEcC-CCCeEEE
Q psy2671 202 SMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKC-------------EGHKHWVLCIAWSP-DSKQLVS 266 (573)
Q Consensus 202 ~~~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~~~~~~~-------------~~h~~~V~~v~~s~-dg~~l~s 266 (573)
.+.+|.+.|++++|+| ++++|++|+.||.|++||+.++...... .+|...|.+++|+| ++.+|++
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 117 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS 117 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE
Confidence 3568999999999999 9999999999999999999887544332 36999999999999 7789999
Q ss_pred EeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEE
Q psy2671 267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346 (573)
Q Consensus 267 gs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~ 346 (573)
++.||.|++||+.+++.... ..+...+.++.|.|.. .++..+++++.||.|++||+..++....+..|...|.+++
T Consensus 118 ~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 118 SSFDKTLKVWDTNTLQTADV--FNFEETVYSHHMSPVS--TKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp EETTSEEEEEETTTTEEEEE--EECSSCEEEEEECSSC--SSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred EeCCCeEEEeeCCCCcccee--ccCCCceeeeEeecCC--CCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence 99999999999998876533 2366778889888753 3556899999999999999999999999999999999999
Q ss_pred ECCCc--EEEEEeCCCeEEEEeCCCCe-eeEec---------------cCCcceeeEEEeccCceeEEEEcCCCceeeCC
Q psy2671 347 WGGSG--LIYSASQDRTIKVWRASDGV-MCRTL---------------EGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408 (573)
Q Consensus 347 ~~~~~--~l~s~s~d~~i~vw~~~~~~-~~~~~---------------~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~ 408 (573)
|++++ .+++++.|+.|++||++++. ....+ .+|...|..+++
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------------------- 253 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF-------------------- 253 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE--------------------
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE--------------------
Confidence 99886 58899999999999998764 33333 344444444444
Q ss_pred CCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeee----ccccccEEEEEECCCCCEEEEeeCCCcE
Q psy2671 409 ANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM----TGHQQLINCVEFSPDGRIIASASFDKSI 484 (573)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~----~~h~~~v~~v~~sp~g~~las~s~dg~i 484 (573)
+|++.++++++.||.+++||+.+........ ......+........+..+++++.|+.|
T Consensus 254 -----------------~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 316 (408)
T 4a11_B 254 -----------------TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTI 316 (408)
T ss_dssp -----------------CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEE
T ss_pred -----------------cCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEE
Confidence 3678899999999999999998764322111 0111112222223345566777889999
Q ss_pred EEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEcc-CCCEEEEee
Q psy2671 485 KLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAP-DGEKVASGG 563 (573)
Q Consensus 485 ~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~-d~~~l~s~~ 563 (573)
++||..+++.+..+.+|...|++++|+|++++|++++.||.|++||+.+++.+.....+... ..+.+ +...+.+++
T Consensus 317 ~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 393 (408)
T 4a11_B 317 AVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK---SQLNPAFEDAWSSSD 393 (408)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------------------------------
T ss_pred EEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEec---cccccccceeecccC
Confidence 99999999999999999999999999999999999999999999999998876554433221 23333 233455677
Q ss_pred CCCcEEEccC
Q psy2671 564 KDKVLRLWQN 573 (573)
Q Consensus 564 ~d~~i~iw~~ 573 (573)
.|+.+++|++
T Consensus 394 ~~~~~~~W~~ 403 (408)
T 4a11_B 394 EEGGTSAWSH 403 (408)
T ss_dssp ----------
T ss_pred ccCceeecCC
Confidence 8899999974
No 73
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4e-39 Score=318.57 Aligned_cols=294 Identities=16% Similarity=0.297 Sum_probs=236.1
Q ss_pred CCCCCCcEEEEEEcCCCCeEE-EEeC---CCeEEEEECCCCeeeEE-ecCCCCcEEEEEEcCC---CCeEEEEeeCCeEE
Q psy2671 203 MPGHAEAVISVKFSPNGRSLA-SGSG---DTTVRFWDVTTQTPLFK-CEGHKHWVLCIAWSPD---SKQLVSGCKNGVIH 274 (573)
Q Consensus 203 ~~gh~~~V~~~~fsp~g~~la-s~s~---d~~i~iwd~~~~~~~~~-~~~h~~~V~~v~~s~d---g~~l~sgs~dg~i~ 274 (573)
+.+|.+.|.+++|+|++..++ +|+. |++|++||+.+++.... ..+|...|.+++|+|+ +++|++|+.||.|+
T Consensus 14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 93 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLH 93 (357)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEE
T ss_pred ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEE
Confidence 357999999999999996554 5554 99999999998775533 3478999999999998 69999999999999
Q ss_pred EEECCCCceecccccCCcccEEEEEeccc-ccCCCCCEEEEEeCCCcEEEEECCCCe-EEEEecCCCc----cEEEEEEC
Q psy2671 275 AWDSSTGKQIGQPMRGHKQWITALSWEPF-HLNHQCRRFASSGKDGAIRIWDVILSQ-CVRVLTSHTR----SVTCIRWG 348 (573)
Q Consensus 275 vwd~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~h~~----~v~~~~~~ 348 (573)
+||+.+++.....+.+|...|.++.|.+. .++++++.+++++.||.|++||+..++ ....+..|.. .+.++.|.
T Consensus 94 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 173 (357)
T 3i2n_A 94 IWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFG 173 (357)
T ss_dssp EECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEE
T ss_pred EEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEE
Confidence 99999887344567799999999988763 345678899999999999999998765 4555544433 34444321
Q ss_pred CCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671 349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE 428 (573)
Q Consensus 349 ~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (573)
. ..+|+
T Consensus 174 ~--------------------------------------------------------------------------~~~~~ 179 (357)
T 3i2n_A 174 N--------------------------------------------------------------------------AYNQE 179 (357)
T ss_dssp C--------------------------------------------------------------------------CCC-C
T ss_pred e--------------------------------------------------------------------------ccCCC
Confidence 0 01245
Q ss_pred CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC---CCCEEEEeeCCCcEEEEeCCCCeEEEee-----cC
Q psy2671 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP---DGRIIASASFDKSIKLWDGRIGKFITTL-----RG 500 (573)
Q Consensus 429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp---~g~~las~s~dg~i~lwd~~~~~~~~~~-----~~ 500 (573)
+.++++++.||.|++||+++... .....|...|.+++|+| ++.+|++++.||.|++||.++++.+..+ .+
T Consensus 180 ~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 257 (357)
T 3i2n_A 180 ERVVCAGYDNGDIKLFDLRNMAL--RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKA 257 (357)
T ss_dssp CCEEEEEETTSEEEEEETTTTEE--EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEEC
T ss_pred CCEEEEEccCCeEEEEECccCce--eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCC
Confidence 66777777778888887766543 33456778899999999 9999999999999999999876654444 38
Q ss_pred CcceEEEEEECCCCC-EEEEEeCCCcEEEEeCCcc-------------------cccccccCcCCCEEEEEEccCCCEEE
Q psy2671 501 HVQAVYMVAWSSDSR-LLVSGSADSTLKVWNMKTK-------------------KIEQDLPGHGDEVYAVDWAPDGEKVA 560 (573)
Q Consensus 501 h~~~v~~v~~s~dg~-~las~s~D~~v~vwd~~~~-------------------~~~~~l~~h~~~v~~~~~s~d~~~l~ 560 (573)
|...|++++|+|+++ +|++++.|+.|++||++.+ +.+..+.+|.+.|++++|+|++++|+
T Consensus 258 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 337 (357)
T 3i2n_A 258 HKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLC 337 (357)
T ss_dssp CSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEE
T ss_pred CcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEE
Confidence 999999999999999 8999999999999999754 34566788999999999999999998
Q ss_pred -EeeCCCcEEEcc
Q psy2671 561 -SGGKDKVLRLWQ 572 (573)
Q Consensus 561 -s~~~d~~i~iw~ 572 (573)
+++.|+.|++|+
T Consensus 338 ~s~~~d~~i~iw~ 350 (357)
T 3i2n_A 338 VCSSFDQTVRVLI 350 (357)
T ss_dssp EEEETTSEEEEEE
T ss_pred EEecCCCcEEEEE
Confidence 899999999997
No 74
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.6e-39 Score=317.43 Aligned_cols=288 Identities=15% Similarity=0.140 Sum_probs=220.7
Q ss_pred CcEEEEEEcCCCCeEEEEeCCC-------eEEEEECCCCee----------eEEecCCCCcEEEEEEcCCCCeEEEEeeC
Q psy2671 208 EAVISVKFSPNGRSLASGSGDT-------TVRFWDVTTQTP----------LFKCEGHKHWVLCIAWSPDSKQLVSGCKN 270 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las~s~d~-------~i~iwd~~~~~~----------~~~~~~h~~~V~~v~~s~dg~~l~sgs~d 270 (573)
-||.|++|+|||++|++||+|. .|++|++..... ...+.+|...|.+++++ ++.+++|+.+
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECC
Confidence 4799999999999999998754 599999875421 13467888889888765 5577777654
Q ss_pred CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE----EEE-----ecCCCcc
Q psy2671 271 GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC----VRV-----LTSHTRS 341 (573)
Q Consensus 271 g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~----~~~-----~~~h~~~ 341 (573)
+..++| +++.|+.+|+|++..... ... ...+...
T Consensus 93 ~~~~l~-------------------------------------s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (365)
T 4h5i_A 93 NSTKIT-------------------------------------QGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDY 135 (365)
T ss_dssp CHHHHH-------------------------------------HTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCC
T ss_pred CccEEE-------------------------------------EecCCCcEEEEEecCCCceEEEeeeeceeecCCcccC
Confidence 432222 223344455554432210 111 1234456
Q ss_pred EEEEEECCCcE-EE--EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671 342 VTCIRWGGSGL-IY--SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418 (573)
Q Consensus 342 v~~~~~~~~~~-l~--s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (573)
+.+++|+++|. ++ +++.|++|++||++++.....+. |...|.+++++
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fs----------------------------- 185 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFS----------------------------- 185 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEEC-----------------------------
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEc-----------------------------
Confidence 88999999983 43 45579999999999998888775 66678888776
Q ss_pred hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCC----cEEEEeCCCCeE
Q psy2671 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK----SIKLWDGRIGKF 494 (573)
Q Consensus 419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg----~i~lwd~~~~~~ 494 (573)
|+|.++++++.++.+.+|.............+|...|.+++|+|+++++++++.|+ .+++||......
T Consensus 186 --------pdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~ 257 (365)
T 4h5i_A 186 --------TDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNT 257 (365)
T ss_dssp --------TTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE
T ss_pred --------cCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccccee
Confidence 55889999987665555554433333344567888999999999999999999887 688899876643
Q ss_pred ----EEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc-ccCcCCCEEEEEEccCCCEEEEeeCCCcEE
Q psy2671 495 ----ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD-LPGHGDEVYAVDWAPDGEKVASGGKDKVLR 569 (573)
Q Consensus 495 ----~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~-l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~ 569 (573)
...+.+|...|++++|||||++||+|+.|++|+|||+++++++.. +.+|.+.|++++|||||++|||||.|++||
T Consensus 258 ~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvr 337 (365)
T 4h5i_A 258 SVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIH 337 (365)
T ss_dssp EEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred cceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 346778999999999999999999999999999999999998876 689999999999999999999999999999
Q ss_pred Ecc
Q psy2671 570 LWQ 572 (573)
Q Consensus 570 iw~ 572 (573)
||+
T Consensus 338 vw~ 340 (365)
T 4h5i_A 338 IIK 340 (365)
T ss_dssp EEE
T ss_pred EEE
Confidence 997
No 75
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.4e-39 Score=318.73 Aligned_cols=290 Identities=15% Similarity=0.134 Sum_probs=212.1
Q ss_pred ccEEEEEEcCCCCeeEEeeCCC-------cEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671 111 EAVISVKFSPNGRSLASGSGDT-------TVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183 (573)
Q Consensus 111 ~~V~~l~~s~~~~~lat~s~D~-------~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (573)
-||.|++|+|||++||+||+|. +|+||++..+...... ...
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~------------------------------~~~-- 62 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKE------------------------------QFH-- 62 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHH------------------------------HEE--
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceee------------------------------eee--
Confidence 3799999999999999998754 5999998765321000 000
Q ss_pred EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEE-----------eCCCeEEEEECCCCeee----EE----
Q psy2671 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG-----------SGDTTVRFWDVTTQTPL----FK---- 244 (573)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~-----------s~d~~i~iwd~~~~~~~----~~---- 244 (573)
......+.+|.+.|.++++++ +.+++| +.|+++|+|++.+.... ..
T Consensus 63 -------------~~~~~~l~~~~~~v~s~~~~~--~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~ 127 (365)
T 4h5i_A 63 -------------ILSEFALEDNDDSPTAIDASK--GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFD 127 (365)
T ss_dssp -------------EEEEEECCTTSCCCCEEEEET--TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSS
T ss_pred -------------eeeEEEccCCCCceEEEEeCC--CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeecee
Confidence 000123668888888887654 455555 45788999987654221 11
Q ss_pred -ecCCCCcEEEEEEcCCCCeEEEE--eeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcE
Q psy2671 245 -CEGHKHWVLCIAWSPDSKQLVSG--CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321 (573)
Q Consensus 245 -~~~h~~~V~~v~~s~dg~~l~sg--s~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v 321 (573)
...+...+.+++|||||++|+++ +.|++|++||+++++.
T Consensus 128 ~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~-------------------------------------- 169 (365)
T 4h5i_A 128 ASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE-------------------------------------- 169 (365)
T ss_dssp CCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE--------------------------------------
T ss_pred ecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE--------------------------------------
Confidence 12345568889999999887644 3567777777665432
Q ss_pred EEEECCCCeEEEEecCCCccEEEEEECCCcE-EEEEeCCCeEEEEeCCCCeee--EeccCCcceeeEEEeccCceeEEEE
Q psy2671 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMC--RTLEGHAHWVNTLALSTDYLMRVEA 398 (573)
Q Consensus 322 ~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~vw~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~~~~~ 398 (573)
+..+. |...|.+++|++++. +++++ ++.+++|+..++... ....+|...+..++++
T Consensus 170 ----------~~~~~-~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fs--------- 228 (365)
T 4h5i_A 170 ----------KFEIE-TRGEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFI--------- 228 (365)
T ss_dssp ----------EEEEE-CSSCCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEE---------
T ss_pred ----------EEEeC-CCCceEEEEEccCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEc---------
Confidence 22222 556688889988874 55555 556667766666544 3456788888888776
Q ss_pred cCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC----eEEEEcCCCCccc---eeeeccccccEEEEEECCC
Q psy2671 399 TSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF----TLFLWNPEKEKKS---LARMTGHQQLINCVEFSPD 471 (573)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg----~i~lwd~~~~~~~---~~~~~~h~~~v~~v~~sp~ 471 (573)
|++..+++++.|+ .+++|+....... ...+.+|...|++++|+||
T Consensus 229 ----------------------------pdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spd 280 (365)
T 4h5i_A 229 ----------------------------ADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMK 280 (365)
T ss_dssp ----------------------------ETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTT
T ss_pred ----------------------------CCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCC
Confidence 4477888888776 6888987654332 3456789999999999999
Q ss_pred CCEEEEeeCCCcEEEEeCCCCeEEEe-ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671 472 GRIIASASFDKSIKLWDGRIGKFITT-LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534 (573)
Q Consensus 472 g~~las~s~dg~i~lwd~~~~~~~~~-~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~ 534 (573)
|++||+|+.|++|+|||+++++.+.. +.+|...|++++|||||++|||||.|++||||++...
T Consensus 281 g~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 281 GELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999999999999887 4799999999999999999999999999999999643
No 76
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-39 Score=324.44 Aligned_cols=319 Identities=12% Similarity=0.185 Sum_probs=229.0
Q ss_pred ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ 188 (573)
Q Consensus 109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
|.++|++++|+|++++||+|+.|++|+|||+.++..
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~-------------------------------------------- 45 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW-------------------------------------------- 45 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEE--------------------------------------------
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCce--------------------------------------------
Confidence 678999999999999999999999999999876521
Q ss_pred eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe---eeEEecCCCCcEEEEEEcCCCCeEE
Q psy2671 189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT---PLFKCEGHKHWVLCIAWSPDSKQLV 265 (573)
Q Consensus 189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~---~~~~~~~h~~~V~~v~~s~dg~~l~ 265 (573)
++...+.+|.+.|.+++|+|++++|++++.|++|++||+.++. +...+.+|...|.+++|+|++++|+
T Consensus 46 ---------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 116 (377)
T 3dwl_C 46 ---------KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFA 116 (377)
T ss_dssp ---------EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCE
T ss_pred ---------EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEE
Confidence 1124567899999999999999999999999999999999876 6777889999999999999999999
Q ss_pred EEeeCCeEEEEECCCCce--ecccccC-CcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC---------------
Q psy2671 266 SGCKNGVIHAWDSSTGKQ--IGQPMRG-HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI--------------- 327 (573)
Q Consensus 266 sgs~dg~i~vwd~~~~~~--~~~~~~~-h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~--------------- 327 (573)
+|+.|+.|++||+++++. ....+.+ |...|.+++|.| +++++++++.|+.|++||+.
T Consensus 117 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 191 (377)
T 3dwl_C 117 VGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP-----NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGS 191 (377)
T ss_dssp EEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT-----TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCS
T ss_pred EEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC-----CCCEEEEEeCCCEEEEEEEEecccCCCcccccccc
Confidence 999999999999988763 2234455 999999999987 56799999999999999984
Q ss_pred ---CCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCee----eEeccCCcceeeEEEeccCceeEEEEc
Q psy2671 328 ---LSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVM----CRTLEGHAHWVNTLALSTDYLMRVEAT 399 (573)
Q Consensus 328 ---~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~----~~~~~~~~~~v~~~~~s~~~~~~~~~~ 399 (573)
.++++..+ +|...|.+++|++++ .+++++.|++|++||+.++.. ...+.+|...|.++++++
T Consensus 192 ~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~--------- 261 (377)
T 3dwl_C 192 RLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWAN--------- 261 (377)
T ss_dssp CCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEE---------
T ss_pred ccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcC---------
Confidence 34556666 899999999999887 699999999999999998877 778889998888888774
Q ss_pred CCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc-cceeeecccc---------------ccE
Q psy2671 400 STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK-KSLARMTGHQ---------------QLI 463 (573)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~-~~~~~~~~h~---------------~~v 463 (573)
++.+|++|+.++.+ +|+..... .....+.... ...
T Consensus 262 ----------------------------~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (377)
T 3dwl_C 262 ----------------------------ESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEE 312 (377)
T ss_dssp ----------------------------TTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-
T ss_pred ----------------------------CCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccc
Confidence 46788888877777 55544222 1111111100 113
Q ss_pred EEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCC-C---EEEEEeCCCcEEEEeC
Q psy2671 464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS-R---LLVSGSADSTLKVWNM 531 (573)
Q Consensus 464 ~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg-~---~las~s~D~~v~vwd~ 531 (573)
..+.|++....+......|... ........|...|+++++.+.. . .|+|||.||.|++||+
T Consensus 313 ~~~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 313 GPVSFTALRSTFRNMDLKGSSQ-------SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -------------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccchhhccccc-------cccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 3334443322222221111111 1122334699999999976543 3 6999999999999985
No 77
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6e-38 Score=315.49 Aligned_cols=294 Identities=24% Similarity=0.414 Sum_probs=238.8
Q ss_pred cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV 184 (573)
Q Consensus 105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (573)
..++|.+.+.+.++++++..+++++.|++|+|||+.+++.....
T Consensus 86 ~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~------------------------------------ 129 (401)
T 4aez_A 86 DAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALA------------------------------------ 129 (401)
T ss_dssp ECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEE------------------------------------
T ss_pred eCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEee------------------------------------
Confidence 34577776544444444577899999999999999887643211
Q ss_pred EeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeE
Q psy2671 185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264 (573)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l 264 (573)
...|...|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++| ++.+|
T Consensus 130 ------------------~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l 189 (401)
T 4aez_A 130 ------------------ETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVL 189 (401)
T ss_dssp ------------------ECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEE
T ss_pred ------------------ecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEE
Confidence 1137889999999999999999999999999999999999999999999999999 46799
Q ss_pred EEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEE
Q psy2671 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344 (573)
Q Consensus 265 ~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~ 344 (573)
++|+.||.|++||++........+.+|...|.++.|.| +++.+++++.||.|++||+..+++...+..|...|.+
T Consensus 190 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~ 264 (401)
T 4aez_A 190 SSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS-----DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKA 264 (401)
T ss_dssp EEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCE
T ss_pred EEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC-----CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEE
Confidence 99999999999999865555566788999999999987 5679999999999999999999999999999999999
Q ss_pred EEECCCc--EEEEEe--CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671 345 IRWGGSG--LIYSAS--QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA 420 (573)
Q Consensus 345 ~~~~~~~--~l~s~s--~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (573)
++|++++ .+++++ .|+.|++||+.++.....
T Consensus 265 ~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~--------------------------------------------- 299 (401)
T 4aez_A 265 VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNT--------------------------------------------- 299 (401)
T ss_dssp EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEE---------------------------------------------
T ss_pred EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEE---------------------------------------------
Confidence 9998754 555554 688888887765432211
Q ss_pred heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEE--eeCCCcEEEEeCCCCeEEE--
Q psy2671 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS--ASFDKSIKLWDGRIGKFIT-- 496 (573)
Q Consensus 421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las--~s~dg~i~lwd~~~~~~~~-- 496 (573)
+ .+...|.+++|+|+++++++ |+.||.|++||..+++...
T Consensus 300 -----------------------------------~-~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~ 343 (401)
T 4aez_A 300 -----------------------------------V-DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQV 343 (401)
T ss_dssp -----------------------------------E-ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEE
T ss_pred -----------------------------------E-eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEE
Confidence 1 13456899999999999999 5589999999999875544
Q ss_pred eecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccc
Q psy2671 497 TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL 540 (573)
Q Consensus 497 ~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l 540 (573)
.+.+|...|.+++|+|+|++|++++.|+.|++|++.+++.+...
T Consensus 344 ~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 344 DIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred EecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 46799999999999999999999999999999999988776543
No 78
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.1e-39 Score=311.06 Aligned_cols=259 Identities=24% Similarity=0.374 Sum_probs=190.7
Q ss_pred cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV 184 (573)
Q Consensus 105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (573)
.+.+|.++|++++|+|+|++||||+.|++|||||+.++...
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~--------------------------------------- 48 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI--------------------------------------- 48 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEE---------------------------------------
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcE---------------------------------------
Confidence 46689999999999999999999999999999998765321
Q ss_pred EeceeeEEEeeccccccCCCCCCCcEEEEEEcC--CCCeEEEEeCCCeEEEEECCCC--eeeEEecCCCCcEEEEEEcCC
Q psy2671 185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP--NGRSLASGSGDTTVRFWDVTTQ--TPLFKCEGHKHWVLCIAWSPD 260 (573)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp--~g~~las~s~d~~i~iwd~~~~--~~~~~~~~h~~~V~~v~~s~d 260 (573)
+...+.||.+.|.+++|+| ++++|++|+.|++|++||+.++ .....+.+|...|.+++|+|+
T Consensus 49 --------------~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~ 114 (316)
T 3bg1_A 49 --------------LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPH 114 (316)
T ss_dssp --------------EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCT
T ss_pred --------------EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCC
Confidence 0123558999999999986 4899999999999999999886 356678899999999999998
Q ss_pred --CCeEEEEeeCCeEEEEECCCCce--ecccccCCcccEEEEEecccccC------------CCCCEEEEEeCCCcEEEE
Q psy2671 261 --SKQLVSGCKNGVIHAWDSSTGKQ--IGQPMRGHKQWITALSWEPFHLN------------HQCRRFASSGKDGAIRIW 324 (573)
Q Consensus 261 --g~~l~sgs~dg~i~vwd~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~------------~~~~~l~s~~~dg~v~iw 324 (573)
+.+|++|+.|++|++||+..+.. ....+.+|...|.++.|.|.... ..+++|++++.|++|++|
T Consensus 115 ~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lW 194 (316)
T 3bg1_A 115 DYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLW 194 (316)
T ss_dssp TTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEE
T ss_pred CCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEE
Confidence 78999999999999999987632 23456789999999999885211 113567788888888888
Q ss_pred ECCCC---eEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCC
Q psy2671 325 DVILS---QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATST 401 (573)
Q Consensus 325 d~~~~---~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~ 401 (573)
|+... ++...+.+|...|.+++|++++.
T Consensus 195 d~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~------------------------------------------------- 225 (316)
T 3bg1_A 195 KEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG------------------------------------------------- 225 (316)
T ss_dssp EECTTSCEEEEECCBCCSSCEEEEECCCCSS-------------------------------------------------
T ss_pred EeCCCCccceeeecccCCCceEEEEecCCCC-------------------------------------------------
Confidence 77543 34555666777777777765420
Q ss_pred CceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCC---ccceeeeccccccEEEEEECCCCCEEEEe
Q psy2671 402 GGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKE---KKSLARMTGHQQLINCVEFSPDGRIIASA 478 (573)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~---~~~~~~~~~h~~~v~~v~~sp~g~~las~ 478 (573)
.++.+|++|+.|++|++|+++.. ......+.+|...|.+++|+|+|++||++
T Consensus 226 -------------------------~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~ 280 (316)
T 3bg1_A 226 -------------------------LPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVS 280 (316)
T ss_dssp -------------------------CSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEE
T ss_pred -------------------------CCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEE
Confidence 01133444444444444444321 11112334577889999999999999999
Q ss_pred eCCCcEEEEeCC
Q psy2671 479 SFDKSIKLWDGR 490 (573)
Q Consensus 479 s~dg~i~lwd~~ 490 (573)
+.||+|++|+..
T Consensus 281 ~~D~~v~lw~~~ 292 (316)
T 3bg1_A 281 GGDNKVTLWKES 292 (316)
T ss_dssp ESSSCEEEEEEC
T ss_pred cCCCeEEEEEEC
Confidence 999999999965
No 79
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-39 Score=325.55 Aligned_cols=299 Identities=15% Similarity=0.233 Sum_probs=231.4
Q ss_pred CCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC--eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCc-
Q psy2671 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ--TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK- 282 (573)
Q Consensus 206 h~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~--~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~- 282 (573)
|.++|.+++|+|++++||+|+.|+.|+|||+.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||+.++.
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT 89 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 5678999999999999999999999999999988 6778889999999999999999999999999999999998876
Q ss_pred -eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe---EEEEecC-CCccEEEEEECCCc-EEEEE
Q psy2671 283 -QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ---CVRVLTS-HTRSVTCIRWGGSG-LIYSA 356 (573)
Q Consensus 283 -~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~-h~~~v~~~~~~~~~-~l~s~ 356 (573)
.....+.+|...|.+++|.| ++++|++++.|+.|++||+..++ ....+.. |...|.+++|++++ .++++
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSP-----NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCT-----TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred eeeeeEecccCCceEEEEECC-----CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 11234668999999999987 56789999999999999998876 3666777 99999999999886 79999
Q ss_pred eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671 357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS 436 (573)
Q Consensus 357 s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~ 436 (573)
+.|++|++||+..+........ .+.+..+
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~-----------------------------------------------~~~~~~~---- 193 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEA-----------------------------------------------SVWGSRL---- 193 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCS-----------------------------------------------CSSCSCC----
T ss_pred eCCCEEEEEEEEecccCCCccc-----------------------------------------------ccccccc----
Confidence 9999999999865432110000 0000000
Q ss_pred CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE----EEeecCCcceEEEEEECC
Q psy2671 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF----ITTLRGHVQAVYMVAWSS 512 (573)
Q Consensus 437 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~----~~~~~~h~~~v~~v~~s~ 512 (573)
........+ +|...|.+++|+|+|++|++++.||.|++||.++++. +..+.+|...|.+++|+|
T Consensus 194 -----------~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 261 (377)
T 3dwl_C 194 -----------PFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWAN 261 (377)
T ss_dssp -----------CEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEE
T ss_pred -----------chhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcC
Confidence 001223334 7889999999999999999999999999999999877 788899999999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCccc--ccc--------------------------------------------------cc
Q psy2671 513 DSRLLVSGSADSTLKVWNMKTKK--IEQ--------------------------------------------------DL 540 (573)
Q Consensus 513 dg~~las~s~D~~v~vwd~~~~~--~~~--------------------------------------------------~l 540 (573)
++++|++++.|+.+ +|+..... ... ..
T Consensus 262 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 340 (377)
T 3dwl_C 262 ESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLP 340 (377)
T ss_dssp TTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCS
T ss_pred CCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccC
Confidence 99999999876665 66654211 000 01
Q ss_pred cCcCCCEEEEEEccCCC----EEEEeeCCCcEEEccC
Q psy2671 541 PGHGDEVYAVDWAPDGE----KVASGGKDKVLRLWQN 573 (573)
Q Consensus 541 ~~h~~~v~~~~~s~d~~----~l~s~~~d~~i~iw~~ 573 (573)
..|.+.|+++.+.++.. .|+|||.||.|++|+.
T Consensus 341 ~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 341 TVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp SSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 23999999999776543 5999999999999973
No 80
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.7e-38 Score=313.58 Aligned_cols=311 Identities=19% Similarity=0.334 Sum_probs=250.9
Q ss_pred CCCCCCcEEEEEEcCC----CCeEEEEeCCCeEEEEECCCCeeeEEec-----CCCCcEEEEEEcCC----CCeEEEEee
Q psy2671 203 MPGHAEAVISVKFSPN----GRSLASGSGDTTVRFWDVTTQTPLFKCE-----GHKHWVLCIAWSPD----SKQLVSGCK 269 (573)
Q Consensus 203 ~~gh~~~V~~~~fsp~----g~~las~s~d~~i~iwd~~~~~~~~~~~-----~h~~~V~~v~~s~d----g~~l~sgs~ 269 (573)
..+|.++|++++|+|+ ...+++++.++.|++||+.++..+..+. .|...|.+++|+|+ +++|++|+.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 3589999999999994 4566777777799999999876655544 36678999999999 679999999
Q ss_pred CCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe---cCCCccEEEEE
Q psy2671 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL---TSHTRSVTCIR 346 (573)
Q Consensus 270 dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~~h~~~v~~~~ 346 (573)
||.|++||+.+++.+. .+.+|...|.++.|.|. +++.+++++.||.|++||+..++....+ ..|...|.+++
T Consensus 94 dg~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~----~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 168 (366)
T 3k26_A 94 RGIIRIINPITMQCIK-HYVGHGNAINELKFHPR----DPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSAD 168 (366)
T ss_dssp TCEEEEECTTTCCEEE-EEESCCSCEEEEEECSS----CTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEE
T ss_pred CCEEEEEEchhceEee-eecCCCCcEEEEEECCC----CCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEE
Confidence 9999999999887653 46789999999999872 4678999999999999999999988887 78999999999
Q ss_pred ECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671 347 WGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ 425 (573)
Q Consensus 347 ~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (573)
|++++ .+++++.|+.|++||++++.....+..+. ..
T Consensus 169 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------------------------------------~~ 205 (366)
T 3k26_A 169 YDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESY-------------------------------------------DY 205 (366)
T ss_dssp ECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHH-------------------------------------------TC
T ss_pred ECCCCCEEEEecCCCCEEEEECCCCccccccceeE-------------------------------------------Ee
Confidence 99876 79999999999999998764432222100 00
Q ss_pred CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe------------
Q psy2671 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK------------ 493 (573)
Q Consensus 426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~------------ 493 (573)
.|++..++... ...+ ........+|...|.+++|+ +++|++++.||.|++||.++++
T Consensus 206 ~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 274 (366)
T 3k26_A 206 NPNKTNRPFIS----QKIH-----FPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESN 274 (366)
T ss_dssp CGGGCSSCCCC----EEEC-----CCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCC
T ss_pred cCCCCcccccc----eeec-----cCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcc
Confidence 11111111110 0011 11233455688999999999 7799999999999999988764
Q ss_pred --EEEeecCCcceEEEEEECCC--CCEEEEEeCCCcEEEEeCCcccccc----cccCc--CCCEEEEEEccCCCEEEEee
Q psy2671 494 --FITTLRGHVQAVYMVAWSSD--SRLLVSGSADSTLKVWNMKTKKIEQ----DLPGH--GDEVYAVDWAPDGEKVASGG 563 (573)
Q Consensus 494 --~~~~~~~h~~~v~~v~~s~d--g~~las~s~D~~v~vwd~~~~~~~~----~l~~h--~~~v~~~~~s~d~~~l~s~~ 563 (573)
.+..+.+|...|++++|+|+ +++|++++.|+.|++||+.+++... .+.+| ...|++++|+|++++|++++
T Consensus 275 ~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 354 (366)
T 3k26_A 275 VTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVC 354 (366)
T ss_dssp EEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred hheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEe
Confidence 37788889999999999999 9999999999999999999876544 67777 78999999999999999999
Q ss_pred CCCcEEEcc
Q psy2671 564 KDKVLRLWQ 572 (573)
Q Consensus 564 ~d~~i~iw~ 572 (573)
.||.|++|+
T Consensus 355 ~dg~i~iwd 363 (366)
T 3k26_A 355 DDASIWRWD 363 (366)
T ss_dssp TTSEEEEEE
T ss_pred CCCEEEEEE
Confidence 999999997
No 81
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-38 Score=322.95 Aligned_cols=298 Identities=20% Similarity=0.225 Sum_probs=248.9
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~ 287 (573)
..+++++|+|+|++|++++.|+.|++||+.+++....+..| ..+....|+|++++|++|+.||.|++||+.+++.. ..
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~ 134 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQR-EI 134 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEE-EE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCccee-ee
Confidence 34557899999999999999999999999887766666666 44556678999999999999999999999887654 45
Q ss_pred ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEe
Q psy2671 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWR 366 (573)
Q Consensus 288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~ 366 (573)
+.+|...|.+++|.| ++++|++++.|+.|++||+.+++.+..+.+|...|.+++|++++ .+++++.|++|++||
T Consensus 135 ~~~h~~~v~~~~~~~-----~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 209 (420)
T 3vl1_A 135 DQAHVSEITKLKFFP-----SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWE 209 (420)
T ss_dssp TTSSSSCEEEEEECT-----TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred cccccCccEEEEECC-----CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeE
Confidence 679999999999987 56799999999999999999999999999999999999999876 799999999999999
Q ss_pred CCCCeeeEeccCC---cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEE
Q psy2671 367 ASDGVMCRTLEGH---AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL 443 (573)
Q Consensus 367 ~~~~~~~~~~~~~---~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~l 443 (573)
++++.....+..| ...+..+++.+.. +.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------------------------------------------~~---- 240 (420)
T 3vl1_A 210 CGTGTTIHTFNRKENPHDGVNSIALFVGT---------------------------------------------DR---- 240 (420)
T ss_dssp TTTTEEEEEECBTTBTTCCEEEEEEEECC---------------------------------------------CS----
T ss_pred CCCCceeEEeecCCCCCCCccEEEEecCC---------------------------------------------cc----
Confidence 9999888777653 3344444332210 00
Q ss_pred EcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec-CCcceEEEEEECCCCC-EEEEEe
Q psy2671 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR-GHVQAVYMVAWSSDSR-LLVSGS 521 (573)
Q Consensus 444 wd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~-~h~~~v~~v~~s~dg~-~las~s 521 (573)
.....+...+.+++|+|++++|++|+.||.|++||.++++.+..+. +|...|++++|+|+++ +|++|+
T Consensus 241 ----------~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~ 310 (420)
T 3vl1_A 241 ----------QLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGY 310 (420)
T ss_dssp ----------SCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEE
T ss_pred ----------eeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEe
Confidence 0112345668889999999999999999999999999988777664 5888999999999999 999999
Q ss_pred CCCcEEEEeCCcccc-cccccC-cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 522 ADSTLKVWNMKTKKI-EQDLPG-HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 522 ~D~~v~vwd~~~~~~-~~~l~~-h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
.|+.|++||+++++. +..+.+ |...|.++. ++++++|++++.|+.|++|+
T Consensus 311 ~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 311 ENGMLAQWDLRSPECPVGEFLINEGTPINNVY-FAAGALFVSSGFDTSIKLDI 362 (420)
T ss_dssp TTSEEEEEETTCTTSCSEEEEESTTSCEEEEE-EETTEEEEEETTTEEEEEEE
T ss_pred CCCeEEEEEcCCCcCchhhhhccCCCCceEEE-eCCCCEEEEecCCccEEEEe
Confidence 999999999998754 566666 667788885 55788999999999999997
No 82
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.4e-38 Score=323.48 Aligned_cols=285 Identities=18% Similarity=0.293 Sum_probs=225.0
Q ss_pred CCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCCCee--eEEecCCCCcEEEEEEcC-CCCeEEEEeeCCeEEEEECC
Q psy2671 204 PGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTP--LFKCEGHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWDSS 279 (573)
Q Consensus 204 ~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~~~--~~~~~~h~~~V~~v~~s~-dg~~l~sgs~dg~i~vwd~~ 279 (573)
.+|...|+|++|+| ++.+||+|+.||+|+|||+.++.. ...+.+|.+.|++|+|+| ++.+|++|+.||+|++||++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 46889999999999 567899999999999999987653 445678999999999998 78899999999999999998
Q ss_pred CCceec-ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc--EEEEE
Q psy2671 280 TGKQIG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIYSA 356 (573)
Q Consensus 280 ~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~ 356 (573)
++.... .....+..++.++.|.| +++++++|+.||.|++||+. ++.+..+.+|...|.+++|++++ .++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSA-----SSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEET-----TTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred CCceeEEeccCCCCccEEEEEECC-----CCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEe
Confidence 654321 11223345667777765 67899999999999999985 45667788999999999998654 56777
Q ss_pred eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671 357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS 436 (573)
Q Consensus 357 s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~ 436 (573)
+.|++|++||++++...
T Consensus 270 s~d~~v~iwd~~~~~~~--------------------------------------------------------------- 286 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGK--------------------------------------------------------------- 286 (435)
T ss_dssp ETTSBCCEEETTTCCSS---------------------------------------------------------------
T ss_pred cCcceeeEEeccccccc---------------------------------------------------------------
Confidence 78888888876543210
Q ss_pred CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcc------eEEEEEE
Q psy2671 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ------AVYMVAW 510 (573)
Q Consensus 437 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~------~v~~v~~ 510 (573)
..+....+|...|++++|+|+|++|++++.||.|++||.++++....+..|.. .+..+.|
T Consensus 287 --------------~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (435)
T 4e54_B 287 --------------ASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAW 352 (435)
T ss_dssp --------------SCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEE
T ss_pred --------------ceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEE
Confidence 11122346888999999999999999999999999999999887777766542 2334567
Q ss_pred CCCCCEEEEEe------------CCCcEEEEeCCcccccccc-cCcCCCEEEE-EEccCCCEEEEeeCCCcEEEcc
Q psy2671 511 SSDSRLLVSGS------------ADSTLKVWNMKTKKIEQDL-PGHGDEVYAV-DWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 511 s~dg~~las~s------------~D~~v~vwd~~~~~~~~~l-~~h~~~v~~~-~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
+|++.++++++ .++.|++||..+++.+..+ .+|...|.++ +|+|+|++|++|+ |++|+||+
T Consensus 353 ~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~ 427 (435)
T 4e54_B 353 HPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWS 427 (435)
T ss_dssp CSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECC
T ss_pred cCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEE
Confidence 77777766654 2357999999999887765 4688888887 6999999999876 88999997
No 83
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.5e-38 Score=307.44 Aligned_cols=250 Identities=27% Similarity=0.530 Sum_probs=201.6
Q ss_pred ccCCCCCCC-cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeE---EecCCCCcEEEEEEcCCCCeEEEEeeCCeEEE
Q psy2671 200 TSSMPGHAE-AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF---KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA 275 (573)
Q Consensus 200 ~~~~~gh~~-~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~---~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~v 275 (573)
..++.+|.+ .|++++|+|+|++||+|+.|++|+|||+.++.... ...+|...|.+++|+|+|++|++|+.|+++++
T Consensus 8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~i 87 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCI 87 (345)
T ss_dssp EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEE
Confidence 345778988 99999999999999999999999999998875432 24689999999999999999999999999999
Q ss_pred EECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEE
Q psy2671 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIY 354 (573)
Q Consensus 276 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~ 354 (573)
|+...+.. +++..+.+|...|.+++|++++ .++
T Consensus 88 w~~~~~~~----------------------------------------------~~~~~~~~h~~~v~~v~~sp~~~~l~ 121 (345)
T 3fm0_A 88 WKKNQDDF----------------------------------------------ECVTTLEGHENEVKSVAWAPSGNLLA 121 (345)
T ss_dssp EEECCC-E----------------------------------------------EEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEccCCCe----------------------------------------------EEEEEccCCCCCceEEEEeCCCCEEE
Confidence 98754321 1123455677777777777655 566
Q ss_pred EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE
Q psy2671 355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS 434 (573)
Q Consensus 355 s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 434 (573)
+|+.|++|++||+.++..
T Consensus 122 s~s~D~~v~iwd~~~~~~-------------------------------------------------------------- 139 (345)
T 3fm0_A 122 TCSRDKSVWVWEVDEEDE-------------------------------------------------------------- 139 (345)
T ss_dssp EEETTSCEEEEEECTTSC--------------------------------------------------------------
T ss_pred EEECCCeEEEEECCCCCC--------------------------------------------------------------
Confidence 677777777776543210
Q ss_pred EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe--EEEeecCCcceEEEEEECC
Q psy2671 435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK--FITTLRGHVQAVYMVAWSS 512 (573)
Q Consensus 435 g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~--~~~~~~~h~~~v~~v~~s~ 512 (573)
......+.+|...|.+++|+|++++|++|+.|++|++||.+.++ ...++.+|...|++++|+|
T Consensus 140 ---------------~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp 204 (345)
T 3fm0_A 140 ---------------YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP 204 (345)
T ss_dssp ---------------EEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT
T ss_pred ---------------eEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC
Confidence 01123345678889999999999999999999999999988775 4578899999999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCcc---------------cccccccC-cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 513 DSRLLVSGSADSTLKVWNMKTK---------------KIEQDLPG-HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 513 dg~~las~s~D~~v~vwd~~~~---------------~~~~~l~~-h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
+|++||+++.|++|++|+.... +++..+.+ |...|++++|+|++..|++++.|+.|++|+
T Consensus 205 ~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~ 280 (345)
T 3fm0_A 205 SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQ 280 (345)
T ss_dssp TSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred CCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 9999999999999999996332 12233444 888999999999999999999999999995
No 84
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.5e-37 Score=297.17 Aligned_cols=283 Identities=24% Similarity=0.408 Sum_probs=223.9
Q ss_pred EEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEE
Q psy2671 113 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQ 192 (573)
Q Consensus 113 V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (573)
..+|+||+++ +||+| .|++|||||+++++++..+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~-------------------------------------------- 61 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLL-------------------------------------------- 61 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEE--------------------------------------------
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEE--------------------------------------------
Confidence 4678999875 67665 5999999999988754221
Q ss_pred EeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCe
Q psy2671 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV 272 (573)
Q Consensus 193 ~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~ 272 (573)
.+.+|...|++++|+|++++||+|+.|++|++||+.+++.+..+.+|...+.++++ ++..+++|+.++.
T Consensus 62 ---------~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~ 130 (318)
T 4ggc_A 62 ---------QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGH 130 (318)
T ss_dssp ---------ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred ---------EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCc
Confidence 23478899999999999999999999999999999999999999999998887665 5678999999999
Q ss_pred EEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE----EEEecCCCccEEEEEEC
Q psy2671 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC----VRVLTSHTRSVTCIRWG 348 (573)
Q Consensus 273 i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~----~~~~~~h~~~v~~~~~~ 348 (573)
+++|+...+......+.+|...+..+.+.+ .++++++++.||+|++||+.+++. ......|...|.++.+.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~ 205 (318)
T 4ggc_A 131 IHHHDVRVAEHHVATLSGHSQEVCGLRWAP-----DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWC 205 (318)
T ss_dssp EEEEETTSSSCEEEEEECCSSCEEEEEECT-----TSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEEC
T ss_pred eEeeecCCCceeEEEEcCccCceEEEEEcC-----CCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEec
Confidence 999999887766667788999999988765 567899999999999999976542 23334455566666654
Q ss_pred CCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671 349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE 428 (573)
Q Consensus 349 ~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (573)
+.+. .
T Consensus 206 ~~~~---------------------------------------------------------------------------~ 210 (318)
T 4ggc_A 206 PWQS---------------------------------------------------------------------------N 210 (318)
T ss_dssp TTST---------------------------------------------------------------------------T
T ss_pred CCCC---------------------------------------------------------------------------c
Confidence 4320 0
Q ss_pred CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee--CCCcEEEEeCCCCeEEEeecCCcceEE
Q psy2671 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS--FDKSIKLWDGRIGKFITTLRGHVQAVY 506 (573)
Q Consensus 429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s--~dg~i~lwd~~~~~~~~~~~~h~~~v~ 506 (573)
.-.+++++.+++|++||...... .....+...+..+.|+|++..+++++ .|+.|++||.++++.+.++.+|...|+
T Consensus 211 ~~~~~~~~~~~~i~lwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~ 288 (318)
T 4ggc_A 211 VLATGGGTSDRHIRIWNVCSGAC--LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVL 288 (318)
T ss_dssp EEEEEECTTTCEEEEEETTTCCE--EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEE
T ss_pred EEEEEecCCCCEEEEEecccccc--cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEE
Confidence 01123344555555555544322 12233456688999999999887654 799999999999999999999999999
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671 507 MVAWSSDSRLLVSGSADSTLKVWNMKTK 534 (573)
Q Consensus 507 ~v~~s~dg~~las~s~D~~v~vwd~~~~ 534 (573)
+++|+|||++|||||.|++|+|||+...
T Consensus 289 ~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 289 SLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 9999999999999999999999998653
No 85
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=6.4e-37 Score=309.87 Aligned_cols=276 Identities=27% Similarity=0.530 Sum_probs=229.6
Q ss_pred EEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEe--cCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671 210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287 (573)
Q Consensus 210 V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~--~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~ 287 (573)
...|+||+++ .||+| .|++|+|||..+++....+ .+|...|+||+|+|||++|++|+.||+|++||+++++.+ ..
T Consensus 108 ~~~l~wS~~n-~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~-~~ 184 (420)
T 4gga_A 108 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL-RN 184 (420)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-EE
T ss_pred ceeEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE-EE
Confidence 4578999864 67766 4999999999999876544 578889999999999999999999999999999998876 45
Q ss_pred ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC-eEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEE
Q psy2671 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365 (573)
Q Consensus 288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw 365 (573)
+.+|...+.++.|.+ ..+++++.|+.+++||.... ..+..+.+|...+.++.+.+++ .+++++.|+.+++|
T Consensus 185 ~~~h~~~v~~~s~~~-------~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~ 257 (420)
T 4gga_A 185 MTSHSARVGSLSWNS-------YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 257 (420)
T ss_dssp ECCCSSCEEEEEEET-------TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EeCCCCceEEEeeCC-------CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEE
Confidence 678999999988754 57999999999999998764 4556778888888888887665 57777777777777
Q ss_pred eCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEc
Q psy2671 366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN 445 (573)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd 445 (573)
+..++...
T Consensus 258 ~~~~~~~~------------------------------------------------------------------------ 265 (420)
T 4gga_A 258 PSAPGEGG------------------------------------------------------------------------ 265 (420)
T ss_dssp ESSCCSSC------------------------------------------------------------------------
T ss_pred eecccccc------------------------------------------------------------------------
Confidence 76543210
Q ss_pred CCCCccceeeeccccccEEEEEECCCC-CEEEE--eeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEe-
Q psy2671 446 PEKEKKSLARMTGHQQLINCVEFSPDG-RIIAS--ASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS- 521 (573)
Q Consensus 446 ~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~las--~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s- 521 (573)
...+.....|...|.+++|+|++ .++++ |+.|++|++||+.+++.+..+..| ..+.++.|+|+++.+++++
T Consensus 266 ----~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg 340 (420)
T 4gga_A 266 ----WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHG 340 (420)
T ss_dssp ----SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEEC
T ss_pred ----ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEe
Confidence 01223445677889999999965 45554 468999999999999999888766 4688899999999988765
Q ss_pred -CCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 522 -ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 522 -~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
.|+.|+|||+.+++.+..+.+|.+.|++++|+|||++|+|||.|++|++|+
T Consensus 341 ~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWd 392 (420)
T 4gga_A 341 FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR 392 (420)
T ss_dssp TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 799999999999999999999999999999999999999999999999997
No 86
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.3e-38 Score=307.50 Aligned_cols=248 Identities=23% Similarity=0.353 Sum_probs=192.1
Q ss_pred CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcC--CCCeEEEEeeCCeEEEEE
Q psy2671 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSP--DSKQLVSGCKNGVIHAWD 277 (573)
Q Consensus 202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~--dg~~l~sgs~dg~i~vwd 277 (573)
.+.||.+.|++++|+|+|++||+|+.|++|+|||+.++. .+..+.+|...|.+++|+| ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456999999999999999999999999999999998764 4667899999999999986 488999999999999999
Q ss_pred CCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC--c-EEE
Q psy2671 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS--G-LIY 354 (573)
Q Consensus 278 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~--~-~l~ 354 (573)
++++... ....+.+|...|.+++|+++ + .++
T Consensus 88 ~~~~~~~----------------------------------------------~~~~~~~h~~~V~~v~~~p~~~g~~la 121 (316)
T 3bg1_A 88 EENGTWE----------------------------------------------KSHEHAGHDSSVNSVCWAPHDYGLILA 121 (316)
T ss_dssp CSSSCCC----------------------------------------------EEEEECCCSSCCCEEEECCTTTCSCEE
T ss_pred CCCCcce----------------------------------------------EEEEccCCCCceEEEEECCCCCCcEEE
Confidence 8654210 11223456667777777654 2 566
Q ss_pred EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE
Q psy2671 355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS 434 (573)
Q Consensus 355 s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 434 (573)
+|+.|++|++|+++.+...
T Consensus 122 sgs~D~~i~lwd~~~~~~~------------------------------------------------------------- 140 (316)
T 3bg1_A 122 CGSSDGAISLLTYTGEGQW------------------------------------------------------------- 140 (316)
T ss_dssp EECSSSCEEEEEECSSSCE-------------------------------------------------------------
T ss_pred EEcCCCCEEEEecCCCCCc-------------------------------------------------------------
Confidence 6777777777765432100
Q ss_pred EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCC-----------------CCEEEEeeCCCcEEEEeCCCC---eE
Q psy2671 435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD-----------------GRIIASASFDKSIKLWDGRIG---KF 494 (573)
Q Consensus 435 g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~-----------------g~~las~s~dg~i~lwd~~~~---~~ 494 (573)
.....+.+|...|.+++|+|+ +++|++|+.|++|++||.+.. +.
T Consensus 141 ----------------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~ 204 (316)
T 3bg1_A 141 ----------------EVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKE 204 (316)
T ss_dssp ----------------EECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEE
T ss_pred ----------------ceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccce
Confidence 001123356666777777776 478999999999999998755 46
Q ss_pred EEeecCCcceEEEEEECCCC----CEEEEEeCCCcEEEEeCCccc----ccccccCcCCCEEEEEEccCCCEEEEeeCCC
Q psy2671 495 ITTLRGHVQAVYMVAWSSDS----RLLVSGSADSTLKVWNMKTKK----IEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566 (573)
Q Consensus 495 ~~~~~~h~~~v~~v~~s~dg----~~las~s~D~~v~vwd~~~~~----~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~ 566 (573)
+..+.+|...|.+++|+|++ ++||+++.|++|++|++.+.. ....+.+|.+.|++++|+|++++|++++.|+
T Consensus 205 ~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~ 284 (316)
T 3bg1_A 205 EQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDN 284 (316)
T ss_dssp EECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSS
T ss_pred eeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 77899999999999999987 899999999999999997631 2234567899999999999999999999999
Q ss_pred cEEEcc
Q psy2671 567 VLRLWQ 572 (573)
Q Consensus 567 ~i~iw~ 572 (573)
+|++|+
T Consensus 285 ~v~lw~ 290 (316)
T 3bg1_A 285 KVTLWK 290 (316)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 999996
No 87
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-38 Score=322.19 Aligned_cols=289 Identities=21% Similarity=0.369 Sum_probs=244.3
Q ss_pred CCCcEEEEEEcCCCC-eEEEE----------eCCCeEEEEECCCCee--eEEecCCCCcEEEEEEcCCCCeEEEEeeCCe
Q psy2671 206 HAEAVISVKFSPNGR-SLASG----------SGDTTVRFWDVTTQTP--LFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV 272 (573)
Q Consensus 206 h~~~V~~~~fsp~g~-~las~----------s~d~~i~iwd~~~~~~--~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~ 272 (573)
+...|.+++|+|+|+ +|++| +.|+.|+|||+.++.. ......|...|.+++|+|++++|++|+.||.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence 345678999999987 89999 8999999999988752 2223468889999999999999999999999
Q ss_pred EEEEECCC---CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe------EEE---EecCCCc
Q psy2671 273 IHAWDSST---GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ------CVR---VLTSHTR 340 (573)
Q Consensus 273 i~vwd~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~------~~~---~~~~h~~ 340 (573)
|++||+.+ +......+.+|...|.++.|.|. .++++++++.||.|++||+...+ ... ....|..
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 166 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAK----QDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD 166 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSS----STTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCC----CCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCC
Confidence 99999987 33234567789999999999873 25789999999999999998876 322 2467899
Q ss_pred cEEEEEECCC--cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671 341 SVTCIRWGGS--GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418 (573)
Q Consensus 341 ~v~~~~~~~~--~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (573)
.|.+++|+++ ..+++++.|+.|++||++++.....+..+.
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-------------------------------------- 208 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTS-------------------------------------- 208 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCC--------------------------------------
T ss_pred CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccc--------------------------------------
Confidence 9999999987 378899999999999988765543332210
Q ss_pred hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC-CEEEEeeCCC---cEEEEeCCCC-e
Q psy2671 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG-RIIASASFDK---SIKLWDGRIG-K 493 (573)
Q Consensus 419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~las~s~dg---~i~lwd~~~~-~ 493 (573)
...+|...|.+++|+|++ .++++++.|+ .|++||.+++ +
T Consensus 209 ------------------------------------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~ 252 (416)
T 2pm9_A 209 ------------------------------------PNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT 252 (416)
T ss_dssp ------------------------------------CSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS
T ss_pred ------------------------------------cccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC
Confidence 012456779999999997 6999999999 9999999986 6
Q ss_pred EEEeec-CCcceEEEEEECC-CCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCC-CEEEEeeCCCcEEE
Q psy2671 494 FITTLR-GHVQAVYMVAWSS-DSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDG-EKVASGGKDKVLRL 570 (573)
Q Consensus 494 ~~~~~~-~h~~~v~~v~~s~-dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~-~~l~s~~~d~~i~i 570 (573)
.+..+. +|...|.+++|+| ++++|++++.|+.|++||+++++.+..+.+|...|++++|+|++ ++|++++.|+.|++
T Consensus 253 ~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~i 332 (416)
T 2pm9_A 253 PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEV 332 (416)
T ss_dssp CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEE
T ss_pred CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEE
Confidence 677788 8999999999999 99999999999999999999999999999999999999999999 89999999999999
Q ss_pred cc
Q psy2671 571 WQ 572 (573)
Q Consensus 571 w~ 572 (573)
|+
T Consensus 333 w~ 334 (416)
T 2pm9_A 333 QT 334 (416)
T ss_dssp EE
T ss_pred EE
Confidence 97
No 88
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.3e-37 Score=305.97 Aligned_cols=275 Identities=16% Similarity=0.174 Sum_probs=235.7
Q ss_pred CCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe---eeEEecCCCCcEEEEEEcCCCC-eEEEEeeCCeEEEEEC
Q psy2671 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT---PLFKCEGHKHWVLCIAWSPDSK-QLVSGCKNGVIHAWDS 278 (573)
Q Consensus 203 ~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~---~~~~~~~h~~~V~~v~~s~dg~-~l~sgs~dg~i~vwd~ 278 (573)
..+|.+.|.+++|+|++++|++++.|+.|++||+.++. ......+|...|.+++|+|+++ +|++|+.||.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 45899999999999999999999999999999998776 3455568999999999999999 9999999999999999
Q ss_pred -CCCceecccccC--CcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC---------CeEEEEecCCCccEEEEE
Q psy2671 279 -STGKQIGQPMRG--HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL---------SQCVRVLTSHTRSVTCIR 346 (573)
Q Consensus 279 -~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~---------~~~~~~~~~h~~~v~~~~ 346 (573)
.++.. ..+.+ |...|.++.|.| ++.+++++.|+.|++||+.. .+++..+. |...|.+++
T Consensus 87 ~~~~~~--~~~~~~~~~~~v~~l~~~~------~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~ 157 (342)
T 1yfq_A 87 IGSPSF--QALTNNEANLGICRICKYG------DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMD 157 (342)
T ss_dssp SSSSSE--EECBSCCCCSCEEEEEEET------TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEE
T ss_pred ccCCce--EeccccCCCCceEEEEeCC------CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEE
Confidence 87765 45667 999999999976 46899999999999999876 55555555 778888888
Q ss_pred ECCCcEEEEEeCCCeEEEEeCCC-CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671 347 WGGSGLIYSASQDRTIKVWRASD-GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ 425 (573)
Q Consensus 347 ~~~~~~l~s~s~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (573)
|++++ +++++.|+.|++|++++ +..
T Consensus 158 ~~~~~-l~~~~~d~~i~i~d~~~~~~~----------------------------------------------------- 183 (342)
T 1yfq_A 158 TNSSR-LIVGMNNSQVQWFRLPLCEDD----------------------------------------------------- 183 (342)
T ss_dssp ECSSE-EEEEESTTEEEEEESSCCTTC-----------------------------------------------------
T ss_pred ecCCc-EEEEeCCCeEEEEECCccccc-----------------------------------------------------
Confidence 88776 77778888888887654 211
Q ss_pred CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCC------eEEEee
Q psy2671 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIG------KFITTL 498 (573)
Q Consensus 426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~------~~~~~~ 498 (573)
........|...|.+++|+| +++++++++.||.|++||.+.. +....+
T Consensus 184 -------------------------~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 238 (342)
T 1yfq_A 184 -------------------------NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238 (342)
T ss_dssp -------------------------CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred -------------------------cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence 01112234566799999999 9999999999999999999876 677778
Q ss_pred cCCcc---------eEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCc-CCCEEEEEEccCCCEEEEeeCCCc
Q psy2671 499 RGHVQ---------AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH-GDEVYAVDWAPDGEKVASGGKDKV 567 (573)
Q Consensus 499 ~~h~~---------~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h-~~~v~~~~~s~d~~~l~s~~~d~~ 567 (573)
.+|.. .|.+++|+|++++|++++.|+.|++||+.+++.+..+.+| .+.|++++ |++++|++++.|++
T Consensus 239 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 87755 9999999999999999999999999999999999999998 99999999 99999999999998
No 89
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.1e-36 Score=290.23 Aligned_cols=276 Identities=26% Similarity=0.503 Sum_probs=225.0
Q ss_pred EEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEe--cCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671 210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287 (573)
Q Consensus 210 V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~--~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~ 287 (573)
..+|+|||++ .||+| .|++|+|||+.+++.+..+ .+|...|.+++|+|++++|++|+.||+|++||+++++.+ ..
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~-~~ 104 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL-RN 104 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE-EE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE-EE
Confidence 4678999987 66665 5999999999999877654 578888999999999999999999999999999999876 34
Q ss_pred ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC-eEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEE
Q psy2671 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365 (573)
Q Consensus 288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw 365 (573)
+.+|...+.++.+. +..+++++.++.+++|+.... ..+..+.+|...+.++.+.+++ .+++++.|++|++|
T Consensus 105 ~~~h~~~~~~~~~~-------~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iw 177 (318)
T 4ggc_A 105 MTSHSARVGSLSWN-------SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 177 (318)
T ss_dssp EECCSSCEEEEEEE-------TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ecCccceEEEeecC-------CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEE
Confidence 67898888877654 357999999999999998765 4556678888888888887665 57777777777777
Q ss_pred eCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEc
Q psy2671 366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN 445 (573)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd 445 (573)
|++++...
T Consensus 178 d~~~~~~~------------------------------------------------------------------------ 185 (318)
T 4ggc_A 178 PSAPGEGG------------------------------------------------------------------------ 185 (318)
T ss_dssp ESSCBTTB------------------------------------------------------------------------
T ss_pred ECCCCccc------------------------------------------------------------------------
Confidence 76543211
Q ss_pred CCCCccceeeeccccccEEEEEECCCCCE---EEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEe-
Q psy2671 446 PEKEKKSLARMTGHQQLINCVEFSPDGRI---IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS- 521 (573)
Q Consensus 446 ~~~~~~~~~~~~~h~~~v~~v~~sp~g~~---las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s- 521 (573)
.........|...|.+++++|++.. +++++.+++|++||.+......... +...+..+.|+|++..+++++
T Consensus 186 ----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg 260 (318)
T 4ggc_A 186 ----WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHG 260 (318)
T ss_dssp ----SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEEC
T ss_pred ----ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEE
Confidence 0112223445667889999987653 3567889999999999887665544 556789999999999887655
Q ss_pred -CCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 522 -ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 522 -~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
.|+.|++||+++++.+..+.+|.+.|++++|+||+++|+|||.|++|+||+
T Consensus 261 ~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 261 FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR 312 (318)
T ss_dssp TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 799999999999999999999999999999999999999999999999997
No 90
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.4e-37 Score=313.89 Aligned_cols=306 Identities=17% Similarity=0.300 Sum_probs=219.3
Q ss_pred CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK 187 (573)
Q Consensus 108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
.|.+.|++++|+|+|++||+|+.||.|+|||+.++........ .+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~---------------------------~~-------- 70 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSR---------------------------GE-------- 70 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCC---------------------------CC--------
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccc---------------------------cc--------
Confidence 4889999999999999999999999999999987642100000 00
Q ss_pred eeeEEEeeccccccCCCCCC------------CcEEEEEEcCCC--CeEEEEeCCCeEEEEECCCCeee-----------
Q psy2671 188 QAVFQVRPVTRCTSSMPGHA------------EAVISVKFSPNG--RSLASGSGDTTVRFWDVTTQTPL----------- 242 (573)
Q Consensus 188 ~~~~~~~~~~~~~~~~~gh~------------~~V~~~~fsp~g--~~las~s~d~~i~iwd~~~~~~~----------- 242 (573)
.++...+.+|. +.|.+++|+|++ ..|++++.|++|++||+.++...
T Consensus 71 ---------~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g 141 (447)
T 3dw8_B 71 ---------YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDG 141 (447)
T ss_dssp ---------EEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC----
T ss_pred ---------eeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccc
Confidence 00112345677 889999999998 78999999999999998764331
Q ss_pred ----------------------------EE-ecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecc-------
Q psy2671 243 ----------------------------FK-CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ------- 286 (573)
Q Consensus 243 ----------------------------~~-~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~------- 286 (573)
.. ..+|...|.+++|+|++++|++| .|+.|++||++.+.....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~ 220 (447)
T 3dw8_B 142 RYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPA 220 (447)
T ss_dssp ----CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCS
T ss_pred cccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccc
Confidence 12 36899999999999999999998 799999999984432222
Q ss_pred cccCCcccEEEEEecccccCCCC-CEEEEEeCCCcEEEEECCCCeE----EEEecCCCc------------cEEEEEECC
Q psy2671 287 PMRGHKQWITALSWEPFHLNHQC-RRFASSGKDGAIRIWDVILSQC----VRVLTSHTR------------SVTCIRWGG 349 (573)
Q Consensus 287 ~~~~h~~~v~~~~~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~----~~~~~~h~~------------~v~~~~~~~ 349 (573)
.+.+|...|.+++|.| ++ +.+++++.||.|++||+..++. ...+..|.. .|.+++|++
T Consensus 221 ~~~~~~~~v~~~~~~p-----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 295 (447)
T 3dw8_B 221 NMEELTEVITAAEFHP-----NSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH 295 (447)
T ss_dssp SGGGCCCCEEEEEECS-----SCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECT
T ss_pred cccccCcceEEEEECC-----CCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECC
Confidence 3568999999999987 44 7899999999999999998776 667777765 677777776
Q ss_pred Cc-EEEEEeCCCeEEEEeCCC-CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC
Q psy2671 350 SG-LIYSASQDRTIKVWRASD-GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP 427 (573)
Q Consensus 350 ~~-~l~s~s~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (573)
++ .+++++. +.|++||++. +..+..+.+|...+
T Consensus 296 ~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~-------------------------------------------- 330 (447)
T 3dw8_B 296 SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLR-------------------------------------------- 330 (447)
T ss_dssp TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGT--------------------------------------------
T ss_pred CCCEEEEeeC-CeEEEEeCCCCccccceeecccccc--------------------------------------------
Confidence 65 4555555 7777777654 43333332221100
Q ss_pred CCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC-------
Q psy2671 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG------- 500 (573)
Q Consensus 428 ~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~------- 500 (573)
....... ....-..+..++|+|++++|++|+.||.|++||..+++.+. +.+
T Consensus 331 --------------------~~l~~~~-~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~ 388 (447)
T 3dw8_B 331 --------------------SKLCSLY-ENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKP 388 (447)
T ss_dssp --------------------TTHHHHH-HTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCT
T ss_pred --------------------ccccccc-cccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeeccccccc
Confidence 0000000 00000113358999999999999999999999999887653 222
Q ss_pred --------------------------CcceEEEEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671 501 --------------------------HVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531 (573)
Q Consensus 501 --------------------------h~~~v~~v~~s~dg~~las~s~D~~v~vwd~ 531 (573)
+...|..++|+|++.+||+++.++ +++|.-
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 389 RTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp TCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred ccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence 234688899999999999998775 888864
No 91
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1e-36 Score=309.95 Aligned_cols=292 Identities=29% Similarity=0.540 Sum_probs=241.1
Q ss_pred CCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCce
Q psy2671 204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283 (573)
Q Consensus 204 ~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~ 283 (573)
.+|...|.+++| +++++++|+.|++|++||+.+++.+..+.+|...|.+++| ++++|++|+.||.|++||+.+++.
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE
Confidence 467788998877 8899999999999999999999999999999999999999 788999999999999999999876
Q ss_pred ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE---EEecCCCccEEEEEECCCcEEEEEeCCC
Q psy2671 284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSHTRSVTCIRWGGSGLIYSASQDR 360 (573)
Q Consensus 284 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~---~~~~~h~~~v~~~~~~~~~~l~s~s~d~ 360 (573)
+ ..+.+|...|.++.|.+ ..+++++.||.|++||+..+... ..+.+|...|.++.+ ....+++|+.|+
T Consensus 206 ~-~~~~~h~~~v~~l~~~~-------~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg 276 (435)
T 1p22_A 206 L-NTLIHHCEAVLHLRFNN-------GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDR 276 (435)
T ss_dssp E-EEECCCCSCEEEEECCT-------TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-ETTEEEEEETTS
T ss_pred E-EEEcCCCCcEEEEEEcC-------CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-CCCEEEEEeCCC
Confidence 5 45678999999999853 58999999999999999887654 677899999999999 445899999999
Q ss_pred eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCe
Q psy2671 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT 440 (573)
Q Consensus 361 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 440 (573)
+|++||++++.....+.+|...+.+++++ +.++++|+.||+
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~---------------------------------------~~~l~~g~~dg~ 317 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHKRGIACLQYR---------------------------------------DRLVVSGSSDNT 317 (435)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEEE---------------------------------------TTEEEEEETTSC
T ss_pred eEEEEECCcCcEEEEEcCCCCcEEEEEeC---------------------------------------CCEEEEEeCCCe
Confidence 99999999999999999998888776543 468999999999
Q ss_pred EEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe---------EEEeecCCcceEEEEEEC
Q psy2671 441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWS 511 (573)
Q Consensus 441 i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~---------~~~~~~~h~~~v~~v~~s 511 (573)
|++||++++. .+..+.+|...|.+++| ++++|++|+.||.|++||.++++ .+..+.+|...|++++|
T Consensus 318 i~iwd~~~~~-~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~- 393 (435)
T 1p22_A 318 IRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF- 393 (435)
T ss_dssp EEEEETTTCC-EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE-
T ss_pred EEEEECCCCC-EEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe-
Confidence 9999998754 56778899999999999 78899999999999999987665 78889999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEc
Q psy2671 512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA 553 (573)
Q Consensus 512 ~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s 553 (573)
++.+|++++.||+|++||+.+......... ..+..++.|.
T Consensus 394 -~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~ 433 (435)
T 1p22_A 394 -DEFQIVSSSHDDTILIWDFLNDPAAQAEPP-RSPSRTYTYI 433 (435)
T ss_dssp -CSSCEEECCSSSEEEEEC-----------------------
T ss_pred -CCCEEEEEeCCCEEEEEECCCCCCcccCCC-CCCccceeee
Confidence 788999999999999999987665443322 2344455554
No 92
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.8e-37 Score=308.78 Aligned_cols=304 Identities=19% Similarity=0.297 Sum_probs=254.3
Q ss_pred CCCeEEEEECCCCeeeEEecCCCCcEEEEEEcC-CCCeEEEEeeCCeEEEEECCCCceecccc------------cCCcc
Q psy2671 227 GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWDSSTGKQIGQPM------------RGHKQ 293 (573)
Q Consensus 227 ~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~-dg~~l~sgs~dg~i~vwd~~~~~~~~~~~------------~~h~~ 293 (573)
.++.+++|++..++....+.+|.+.|.+++|+| ++++|++|+.||.|++||+.++....... .+|..
T Consensus 21 ~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (408)
T 4a11_B 21 AESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY 100 (408)
T ss_dssp HHHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS
T ss_pred ccCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC
Confidence 355688888887777788899999999999999 99999999999999999999876432211 36999
Q ss_pred cEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc----EEEEEeCCCeEEEEeCCC
Q psy2671 294 WITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG----LIYSASQDRTIKVWRASD 369 (573)
Q Consensus 294 ~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~----~l~s~s~d~~i~vw~~~~ 369 (573)
.|.+++|.|. ++.++++++.||.|++||+..++....+. +...+.++.+.+.+ .+++++.|+.|++||+++
T Consensus 101 ~v~~~~~~~~----~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 101 SVETVQWYPH----DTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp CEEEEEECTT----CTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred cEEEEEEccC----CCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 9999999873 45689999999999999999998887776 67788999987532 799999999999999999
Q ss_pred CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc-EEEEEeCCCeEEEEcCCC
Q psy2671 370 GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE-KLVSGSDDFTLFLWNPEK 448 (573)
Q Consensus 370 ~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~lwd~~~ 448 (573)
+.....+.+|...|.++++++ ++. .+++|+.||.|++||++.
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~-------------------------------------~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSP-------------------------------------RYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECS-------------------------------------SCTTEEEEEETTSCEEEEETTC
T ss_pred cceeeeecCCCCcEEEEEECC-------------------------------------CCCcEEEEEcCCCcEEEEECCC
Confidence 999899999999998888764 355 589999999999999987
Q ss_pred Cccceeee---------------ccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc-----ceEEEE
Q psy2671 449 EKKSLARM---------------TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV-----QAVYMV 508 (573)
Q Consensus 449 ~~~~~~~~---------------~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~-----~~v~~v 508 (573)
.......+ .+|...|.+++|+|++++|++++.||.|++||.++++....+.++. ..+...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (408)
T 4a11_B 219 ASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFT 298 (408)
T ss_dssp SSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCE
T ss_pred CCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeE
Confidence 65444333 5788899999999999999999999999999999887655443321 112222
Q ss_pred EECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 509 AWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 509 ~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
.....+..+++++.|+.|++||+.+++.+..+.+|.+.|++++|+|++++|++++.||.|++|+
T Consensus 299 ~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~ 362 (408)
T 4a11_B 299 VSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWV 362 (408)
T ss_dssp ECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred EecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEe
Confidence 2233455677778899999999999999999999999999999999999999999999999997
No 93
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.2e-36 Score=309.36 Aligned_cols=280 Identities=26% Similarity=0.503 Sum_probs=239.6
Q ss_pred CCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEe
Q psy2671 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ 186 (573)
Q Consensus 107 ~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (573)
.+|...|.+++| ++++|++|+.||+|++||+.+++++
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~----------------------------------------- 166 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECK----------------------------------------- 166 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEE-----------------------------------------
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEE-----------------------------------------
Confidence 467788999887 7999999999999999999876543
Q ss_pred ceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEE
Q psy2671 187 KQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVS 266 (573)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~s 266 (573)
..+.+|.+.|.+++| ++++|++|+.||+|++||+.+++.+..+.+|...|.+++|++ .+|++
T Consensus 167 --------------~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s 228 (435)
T 1p22_A 167 --------------RILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVT 228 (435)
T ss_dssp --------------EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEE
T ss_pred --------------EEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEE
Confidence 224589999999998 788999999999999999999999999999999999999974 58999
Q ss_pred EeeCCeEEEEECCCCceec--ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEE
Q psy2671 267 GCKNGVIHAWDSSTGKQIG--QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344 (573)
Q Consensus 267 gs~dg~i~vwd~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~ 344 (573)
|+.||.|++||+.++.... ..+.+|...|.++.| +++.+++++.||.|++||+.+++.+..+.+|...|.+
T Consensus 229 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~ 301 (435)
T 1p22_A 229 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-------DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 301 (435)
T ss_dssp EETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-------ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred eeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-------CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEE
Confidence 9999999999998876542 456789999999987 3468999999999999999999999999999999999
Q ss_pred EEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheee
Q psy2671 345 IRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA 424 (573)
Q Consensus 345 ~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (573)
+.+. +..+++|+.|++|++||++++.....+.+|...|.++++
T Consensus 302 ~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~------------------------------------ 344 (435)
T 1p22_A 302 LQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF------------------------------------ 344 (435)
T ss_dssp EEEE-TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC------------------------------------
T ss_pred EEeC-CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe------------------------------------
Confidence 9995 458999999999999999999999999999988877764
Q ss_pred eCCCCcEEEEEeCCCeEEEEcCCCCc--------cceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE
Q psy2671 425 QCPEGEKLVSGSDDFTLFLWNPEKEK--------KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496 (573)
Q Consensus 425 ~~~~~~~l~sg~~dg~i~lwd~~~~~--------~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~ 496 (573)
++.++++|+.||.|++||+.... ..+..+.+|...|.+++| ++++|++|+.||+|++||..+.....
T Consensus 345 ---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 345 ---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp ---CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--------
T ss_pred ---cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 25689999999999999975432 146678899999999999 67899999999999999998765433
No 94
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.8e-36 Score=295.48 Aligned_cols=286 Identities=14% Similarity=0.104 Sum_probs=231.2
Q ss_pred CCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEE
Q psy2671 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVY 185 (573)
Q Consensus 106 ~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (573)
..+|.+.|++++|+|++++||+|+.|++|+|||+.++.....
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~-------------------------------------- 48 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVD-------------------------------------- 48 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEE--------------------------------------
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcccc--------------------------------------
Confidence 457999999999999999999999999999999987642100
Q ss_pred eceeeEEEeeccccccCCCCCCCcEEEEEEcCCCC-eEEEEeCCCeEEEEEC-CCCeeeEEecC--CCCcEEEEEEcCCC
Q psy2671 186 QKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR-SLASGSGDTTVRFWDV-TTQTPLFKCEG--HKHWVLCIAWSPDS 261 (573)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~-~las~s~d~~i~iwd~-~~~~~~~~~~~--h~~~V~~v~~s~dg 261 (573)
...+.+|...|.+++|+|+++ +|++|+.|+.|++||+ .++.. ..+.+ |...|.+++|+| +
T Consensus 49 --------------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~ 112 (342)
T 1yfq_A 49 --------------LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-D 112 (342)
T ss_dssp --------------EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-T
T ss_pred --------------ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-C
Confidence 001226889999999999999 9999999999999999 77654 67778 999999999999 9
Q ss_pred CeEEEEeeCCeEEEEECCC---------CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC-Ce-
Q psy2671 262 KQLVSGCKNGVIHAWDSST---------GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-SQ- 330 (573)
Q Consensus 262 ~~l~sgs~dg~i~vwd~~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~- 330 (573)
++|++++.|+.|++||+++ ++.+. .+. |...|.++.|.|. .+++++.|+.|++||+.. ..
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~-~~~~v~~~~~~~~-------~l~~~~~d~~i~i~d~~~~~~~ 183 (342)
T 1yfq_A 113 DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSN-NTK-VKNKIFTMDTNSS-------RLIVGMNNSQVQWFRLPLCEDD 183 (342)
T ss_dssp TEEEEEETTSEEEEECHHHHTTBCEEEEESCSS-SSS-SCCCEEEEEECSS-------EEEEEESTTEEEEEESSCCTTC
T ss_pred CEEEEEcCCCeEEEEcccccccccccccCCeee-EEe-eCCceEEEEecCC-------cEEEEeCCCeEEEEECCccccc
Confidence 9999999999999999876 54432 233 8889999998762 389999999999999987 43
Q ss_pred -EEEEecCCCccEEEEEECC-Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeC
Q psy2671 331 -CVRVLTSHTRSVTCIRWGG-SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407 (573)
Q Consensus 331 -~~~~~~~h~~~v~~~~~~~-~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~ 407 (573)
.......|...+.+++|++ ++ .+++++.|+.+++|+++..... .
T Consensus 184 ~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~--~------------------------------- 230 (342)
T 1yfq_A 184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDD--Y------------------------------- 230 (342)
T ss_dssp CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCS--T-------------------------------
T ss_pred cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcc--c-------------------------------
Confidence 3344556788889999887 55 6778888888888876543000 0
Q ss_pred CCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec---------cccccEEEEEECCCCCEEEEe
Q psy2671 408 PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT---------GHQQLINCVEFSPDGRIIASA 478 (573)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~---------~h~~~v~~v~~sp~g~~las~ 478 (573)
.......+. +|...|.+++|+|++++|+++
T Consensus 231 -----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 269 (342)
T 1yfq_A 231 -----------------------------------------NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA 269 (342)
T ss_dssp -----------------------------------------TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE
T ss_pred -----------------------------------------ccccceeeecccccccccccceeEEEEEEcCCCCEEEEe
Confidence 001111122 345589999999999999999
Q ss_pred eCCCcEEEEeCCCCeEEEeecCC-cceEEEEEECCCCCEEEEEeCCCc-EEEEe
Q psy2671 479 SFDKSIKLWDGRIGKFITTLRGH-VQAVYMVAWSSDSRLLVSGSADST-LKVWN 530 (573)
Q Consensus 479 s~dg~i~lwd~~~~~~~~~~~~h-~~~v~~v~~s~dg~~las~s~D~~-v~vwd 530 (573)
+.||.|++||..+++.+..+.+| ...|++++ |++++|++++.|++ .+.|.
T Consensus 270 ~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 270 GSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp ETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred cCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 99999999999999999999998 99999999 99999999999998 55554
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.3e-37 Score=314.02 Aligned_cols=292 Identities=17% Similarity=0.330 Sum_probs=233.2
Q ss_pred CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe-----------eeEEecCCC------------CcEEEEEEcCCC
Q psy2671 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-----------PLFKCEGHK------------HWVLCIAWSPDS 261 (573)
Q Consensus 205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~-----------~~~~~~~h~------------~~V~~v~~s~dg 261 (573)
.|.+.|.+++|+|+|++||+|+.||.|+|||+.++. ....+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 467899999999999999999999999999998776 467788998 889999999998
Q ss_pred --CeEEEEeeCCeEEEEECCCCcee---------------------------------------cccccCCcccEEEEEe
Q psy2671 262 --KQLVSGCKNGVIHAWDSSTGKQI---------------------------------------GQPMRGHKQWITALSW 300 (573)
Q Consensus 262 --~~l~sgs~dg~i~vwd~~~~~~~---------------------------------------~~~~~~h~~~v~~~~~ 300 (573)
.+|++++.|+.|++||+.++... .....+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999998764321 0114679999999999
Q ss_pred cccccCCCCCEEEEEeCCCcEEEEECCC-CeEEE-------EecCCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCC
Q psy2671 301 EPFHLNHQCRRFASSGKDGAIRIWDVIL-SQCVR-------VLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDG 370 (573)
Q Consensus 301 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~-------~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~ 370 (573)
.| ++++|+++ .|+.|++||+.. .+... .+.+|...|.+++|++++ .+++|+.|++|++||++++
T Consensus 186 ~~-----~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 186 NS-----DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS 259 (447)
T ss_dssp CT-----TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC
T ss_pred cC-----CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC
Confidence 87 56789998 899999999984 44444 256899999999999875 7999999999999999876
Q ss_pred ee----eEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcC
Q psy2671 371 VM----CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNP 446 (573)
Q Consensus 371 ~~----~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~ 446 (573)
.. ...+.+|...
T Consensus 260 ~~~~~~~~~~~~~~~~---------------------------------------------------------------- 275 (447)
T 3dw8_B 260 ALCDRHSKLFEEPEDP---------------------------------------------------------------- 275 (447)
T ss_dssp SSSCTTCEEECCC-------------------------------------------------------------------
T ss_pred ccccceeeEeccCCCc----------------------------------------------------------------
Confidence 54 2223222110
Q ss_pred CCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCC-CeEEEeecCCcce---------------EEEEEE
Q psy2671 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI-GKFITTLRGHVQA---------------VYMVAW 510 (573)
Q Consensus 447 ~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~-~~~~~~~~~h~~~---------------v~~v~~ 510 (573)
.....+.+|...|.+++|+|+|++|++++. +.|++||.++ ++.+..+.+|... ++.++|
T Consensus 276 ----~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 350 (447)
T 3dw8_B 276 ----SNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCW 350 (447)
T ss_dssp ------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEE
T ss_pred ----cccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEE
Confidence 001123446678999999999999999999 9999999997 8888888888532 334899
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCccccccc--------------------------------ccCcCCCEEEEEEccCCCE
Q psy2671 511 SSDSRLLVSGSADSTLKVWNMKTKKIEQD--------------------------------LPGHGDEVYAVDWAPDGEK 558 (573)
Q Consensus 511 s~dg~~las~s~D~~v~vwd~~~~~~~~~--------------------------------l~~h~~~v~~~~~s~d~~~ 558 (573)
+|++++|++|+.|+.|++||+.+++.+.. ...+...|..++|+|++++
T Consensus 351 s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~ 430 (447)
T 3dw8_B 351 NGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENI 430 (447)
T ss_dssp CTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSE
T ss_pred CCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCE
Confidence 99999999999999999999988765320 0123467899999999999
Q ss_pred EEEeeCCCcEEEcc
Q psy2671 559 VASGGKDKVLRLWQ 572 (573)
Q Consensus 559 l~s~~~d~~i~iw~ 572 (573)
||+++.++ +++|.
T Consensus 431 la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 431 IAVATTNN-LYIFQ 443 (447)
T ss_dssp EEEECSSC-EEEEE
T ss_pred EEEEecce-eeeec
Confidence 99998887 66664
No 96
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.6e-36 Score=296.84 Aligned_cols=300 Identities=20% Similarity=0.323 Sum_probs=226.4
Q ss_pred cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV 184 (573)
Q Consensus 105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (573)
.+.||.+.|++++|+|++++||+|+.||+|+|||+.++....+
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~------------------------------------- 48 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWE------------------------------------- 48 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEE-------------------------------------
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcce-------------------------------------
Confidence 4679999999999999999999999999999999986542211
Q ss_pred EeceeeEEEeeccccccCCCCCCCcEEEEEEcC--CCCeEEEEeCCCeEEEEECCCC---------eeeEEecCCCCcEE
Q psy2671 185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP--NGRSLASGSGDTTVRFWDVTTQ---------TPLFKCEGHKHWVL 253 (573)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp--~g~~las~s~d~~i~iwd~~~~---------~~~~~~~~h~~~V~ 253 (573)
+...+.+|...|.+++|+| ++++|++|+.|++|++||+.++ +++..+.+|...|.
T Consensus 49 --------------~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (351)
T 3f3f_A 49 --------------LSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLY 114 (351)
T ss_dssp --------------EEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEE
T ss_pred --------------ecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCcee
Confidence 1123457999999999999 6999999999999999999876 55778889999999
Q ss_pred EEEEcCC--CCeEEEEeeCCeEEEEECCCCceecc------------cccCCcccEEEEEecccccCCCCCEEEEEeCCC
Q psy2671 254 CIAWSPD--SKQLVSGCKNGVIHAWDSSTGKQIGQ------------PMRGHKQWITALSWEPFHLNHQCRRFASSGKDG 319 (573)
Q Consensus 254 ~v~~s~d--g~~l~sgs~dg~i~vwd~~~~~~~~~------------~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg 319 (573)
+++|+|+ +.+|++++.||.|++||+++++.+.. ...+|...+.++.|.|... .+..+++++.++
T Consensus 115 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~l~~~~~~~ 192 (351)
T 3f3f_A 115 SVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRF--SPEKLAVSALEQ 192 (351)
T ss_dssp EEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSS--SCCEEEEEETTE
T ss_pred EEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCC--CCcEEEEecCCC
Confidence 9999999 99999999999999999988764321 1126778899999988532 357899999999
Q ss_pred cEEEEECCCCeE--EEEecCCCccEEEEEECCCc-----EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCc
Q psy2671 320 AIRIWDVILSQC--VRVLTSHTRSVTCIRWGGSG-----LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392 (573)
Q Consensus 320 ~v~iwd~~~~~~--~~~~~~h~~~v~~~~~~~~~-----~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~ 392 (573)
.+.+|+...++. ...+.+|...|.+++|++++ .+++++.|+.|++||++.+........+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------ 260 (351)
T 3f3f_A 193 AIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESL------------ 260 (351)
T ss_dssp EEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------
T ss_pred cEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcc------------
Confidence 998888877764 66788999999999999885 79999999999999976542211100000
Q ss_pred eeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC
Q psy2671 393 LMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG 472 (573)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g 472 (573)
..+.....++..
T Consensus 261 --------------------------------------------------------------------~~~~~~~~~~~~ 272 (351)
T 3f3f_A 261 --------------------------------------------------------------------TNSNMFDNSADV 272 (351)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------cceeccCCCccc
Confidence 000001111111
Q ss_pred C----EEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc
Q psy2671 473 R----IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE 537 (573)
Q Consensus 473 ~----~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~ 537 (573)
. ....+.....+.+|+....+.+..+.+|...|++++|+|++++|++++.|+.|++|++.+++..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 273 DMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp ------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCE
T ss_pred ccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcch
Confidence 1 1123344556778887778888999999999999999999999999999999999999876543
No 97
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-35 Score=297.90 Aligned_cols=283 Identities=22% Similarity=0.446 Sum_probs=241.9
Q ss_pred EEecCCCCc--EEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCc
Q psy2671 243 FKCEGHKHW--VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320 (573)
Q Consensus 243 ~~~~~h~~~--V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~ 320 (573)
....+|... +.+++|++ ..+++++.|+.|++||+.+++........|...|.+++|.| ++++|++++.||.
T Consensus 85 ~~~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~-----~~~~l~~~~~dg~ 157 (401)
T 4aez_A 85 LDAPGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSH-----DGSFLSVGLGNGL 157 (401)
T ss_dssp EECTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECT-----TSSEEEEEETTSC
T ss_pred eeCCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECC-----CCCEEEEECCCCe
Confidence 334455544 45667765 56889999999999999998876544455889999999987 5679999999999
Q ss_pred EEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCC-CCeeeEeccCCcceeeEEEeccCceeEEEEc
Q psy2671 321 IRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRAS-DGVMCRTLEGHAHWVNTLALSTDYLMRVEAT 399 (573)
Q Consensus 321 v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~ 399 (573)
|++||+.+++.+..+.+|...|.++.|.+ ..+++++.|+.|++||++ .+.....+.+|...|..++++
T Consensus 158 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~---------- 226 (401)
T 4aez_A 158 VDIYDVESQTKLRTMAGHQARVGCLSWNR-HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWR---------- 226 (401)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC----------
T ss_pred EEEEECcCCeEEEEecCCCCceEEEEECC-CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEc----------
Confidence 99999999999999999999999999954 589999999999999998 466677888898888888776
Q ss_pred CCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC-CEEEEe
Q psy2671 400 STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG-RIIASA 478 (573)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~las~ 478 (573)
|++.++++|+.|+.|++||+++.. ....+.+|...|.+++|+|++ .+++++
T Consensus 227 ---------------------------~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~p~~~~ll~~~ 278 (401)
T 4aez_A 227 ---------------------------SDGLQLASGGNDNVVQIWDARSSI-PKFTKTNHNAAVKAVAWCPWQSNLLATG 278 (401)
T ss_dssp ---------------------------TTSSEEEEEETTSCEEEEETTCSS-EEEEECCCSSCCCEEEECTTSTTEEEEE
T ss_pred ---------------------------CCCCEEEEEeCCCeEEEccCCCCC-ccEEecCCcceEEEEEECCCCCCEEEEe
Confidence 457899999999999999998743 455677899999999999976 566665
Q ss_pred e--CCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEE--eCCCcEEEEeCCccccc--ccccCcCCCEEEEEE
Q psy2671 479 S--FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSG--SADSTLKVWNMKTKKIE--QDLPGHGDEVYAVDW 552 (573)
Q Consensus 479 s--~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~--s~D~~v~vwd~~~~~~~--~~l~~h~~~v~~~~~ 552 (573)
+ .|+.|++||.++++.+..+. +...|.+++|+|++++|+++ +.|+.|++|++.+++.. ..+.+|...|.+++|
T Consensus 279 ~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~ 357 (401)
T 4aez_A 279 GGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSAL 357 (401)
T ss_dssp CCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEE
T ss_pred cCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEE
Confidence 5 79999999999999888886 45789999999999999994 48999999999886544 347799999999999
Q ss_pred ccCCCEEEEeeCCCcEEEcc
Q psy2671 553 APDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 553 s~d~~~l~s~~~d~~i~iw~ 572 (573)
+|++++|++++.||.|++|+
T Consensus 358 s~dg~~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 358 SPDGRILSTAASDENLKFWR 377 (401)
T ss_dssp CTTSSEEEEECTTSEEEEEE
T ss_pred CCCCCEEEEEeCCCcEEEEE
Confidence 99999999999999999997
No 98
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=294.91 Aligned_cols=292 Identities=15% Similarity=0.241 Sum_probs=241.1
Q ss_pred EECCCCeeeEEecCCCCcEEEEEEcCC---CCeEEEEeeCCeEEEEECCC-CceecccccCCcccEEEEEecccccCCCC
Q psy2671 234 WDVTTQTPLFKCEGHKHWVLCIAWSPD---SKQLVSGCKNGVIHAWDSST-GKQIGQPMRGHKQWITALSWEPFHLNHQC 309 (573)
Q Consensus 234 wd~~~~~~~~~~~~h~~~V~~v~~s~d---g~~l~sgs~dg~i~vwd~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 309 (573)
|+....+.+..+.+|...|.+++|+|+ |++|++|+.||.|++||+.+ +..+...+.+|...|.+++|.| ++
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-----~~ 98 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSD-----DG 98 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECT-----TS
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECc-----CC
Confidence 344555667778999999999999999 69999999999999999988 5555466788999999999987 56
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEE--CCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEE
Q psy2671 310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW--GGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTL 386 (573)
Q Consensus 310 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~ 386 (573)
++|++++.||.|++||+..++... +..|...|.+++| ++++ .+++++.|+.|++||++++.....+..+.. +..+
T Consensus 99 ~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~ 176 (368)
T 3mmy_A 99 SKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER-CYCA 176 (368)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC-EEEE
T ss_pred CEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC-ceEE
Confidence 799999999999999999888766 5679999999999 7776 699999999999999998887776665542 2111
Q ss_pred EeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec-cccccEEE
Q psy2671 387 ALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT-GHQQLINC 465 (573)
Q Consensus 387 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~ 465 (573)
. +....+++++.++.+++|+++.......... .+...+.+
T Consensus 177 ~---------------------------------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (368)
T 3mmy_A 177 D---------------------------------------VIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRC 217 (368)
T ss_dssp E---------------------------------------EETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEE
T ss_pred E---------------------------------------ecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCce
Confidence 1 1234788899999999999987654433322 23344666
Q ss_pred EEECCCCCE----EEEeeCCCcEEEEeCCCC---eEEEeecCCcc------------eEEEEEECCCCCEEEEEeCCCcE
Q psy2671 466 VEFSPDGRI----IASASFDKSIKLWDGRIG---KFITTLRGHVQ------------AVYMVAWSSDSRLLVSGSADSTL 526 (573)
Q Consensus 466 v~~sp~g~~----las~s~dg~i~lwd~~~~---~~~~~~~~h~~------------~v~~v~~s~dg~~las~s~D~~v 526 (573)
+.+.++... +++++.||.|++||.+.. +.+..+.+|.. .|++++|+|++++|++++.|+.|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i 297 (368)
T 3mmy_A 218 VAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRF 297 (368)
T ss_dssp EEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCE
T ss_pred EEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeE
Confidence 766665544 999999999999999887 55677778876 69999999999999999999999
Q ss_pred EEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671 527 KVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571 (573)
Q Consensus 527 ~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw 571 (573)
++||+.+++.+..+.+|...|.+++|+|++++|++++.|+..+.|
T Consensus 298 ~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~ 342 (368)
T 3mmy_A 298 SFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGH 342 (368)
T ss_dssp EEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCG
T ss_pred EEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccc
Confidence 999999999999999999999999999999999999998754444
No 99
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=292.91 Aligned_cols=292 Identities=17% Similarity=0.247 Sum_probs=236.1
Q ss_pred cCCCCCCCcEEEEEEcCC---CCeEEEEeCCCeEEEEECCC-Ceee-EEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEE
Q psy2671 201 SSMPGHAEAVISVKFSPN---GRSLASGSGDTTVRFWDVTT-QTPL-FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA 275 (573)
Q Consensus 201 ~~~~gh~~~V~~~~fsp~---g~~las~s~d~~i~iwd~~~-~~~~-~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~v 275 (573)
..+.+|.+.|++++|+|+ |++|++|+.|+.|++||+.+ +..+ ..+.+|...|.+++|+|++++|++++.||.|++
T Consensus 33 ~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i 112 (368)
T 3mmy_A 33 EVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKM 112 (368)
T ss_dssp ECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEE
Confidence 457899999999999999 69999999999999999987 5444 678899999999999999999999999999999
Q ss_pred EECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEE
Q psy2671 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYS 355 (573)
Q Consensus 276 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s 355 (573)
||+++++.+. ..+|...|.++.|.+ .++++++++++.||.|++||+.+++++..+..|. .+.++.+.++ .+++
T Consensus 113 wd~~~~~~~~--~~~~~~~v~~~~~~~---~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~ 185 (368)
T 3mmy_A 113 WDLSSNQAIQ--IAQHDAPVKTIHWIK---APNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIYP-MAVV 185 (368)
T ss_dssp EETTTTEEEE--EEECSSCEEEEEEEE---CSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEETT-EEEE
T ss_pred EEcCCCCcee--eccccCceEEEEEEe---CCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecCC-eeEE
Confidence 9999887653 567999999999943 2366789999999999999999998888887765 5666666544 6788
Q ss_pred EeCCCeEEEEeCCCCeeeEe-c-cCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671 356 ASQDRTIKVWRASDGVMCRT-L-EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV 433 (573)
Q Consensus 356 ~s~d~~i~vw~~~~~~~~~~-~-~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 433 (573)
++.++.+++|+++....... . ..+...+..+++..+. ......++
T Consensus 186 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~ 232 (368)
T 3mmy_A 186 ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDK---------------------------------QNKPTGFA 232 (368)
T ss_dssp EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECT---------------------------------TSCEEEEE
T ss_pred EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccC---------------------------------CCCCCeEE
Confidence 89999999999976543221 1 1112222222221110 01123499
Q ss_pred EEeCCCeEEEEcCCCCc--cceeeeccccc------------cEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671 434 SGSDDFTLFLWNPEKEK--KSLARMTGHQQ------------LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR 499 (573)
Q Consensus 434 sg~~dg~i~lwd~~~~~--~~~~~~~~h~~------------~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~ 499 (573)
+++.||.+++|++.... .....+.+|.. .|.+++|+|++++|++|+.||.|++||.++++.+..+.
T Consensus 233 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 312 (368)
T 3mmy_A 233 LGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE 312 (368)
T ss_dssp EEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred EecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec
Confidence 99999999999998653 34455666665 79999999999999999999999999999999999999
Q ss_pred CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671 500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532 (573)
Q Consensus 500 ~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~ 532 (573)
+|...|.+++|+|+|++||+++.|+..+.|++.
T Consensus 313 ~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 313 QLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp CCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred CCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 999999999999999999999999876666543
No 100
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=7.6e-36 Score=293.53 Aligned_cols=306 Identities=19% Similarity=0.311 Sum_probs=211.2
Q ss_pred CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC----eeeEEecCCCCcEEEEEEcC--CCCeEEEEeeCCeEEE
Q psy2671 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ----TPLFKCEGHKHWVLCIAWSP--DSKQLVSGCKNGVIHA 275 (573)
Q Consensus 202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~----~~~~~~~~h~~~V~~v~~s~--dg~~l~sgs~dg~i~v 275 (573)
.+.||.+.|++++|+|++++||+|+.|++|++||+.++ +....+.+|...|.+++|+| |+++|++|+.||.|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 35699999999999999999999999999999999876 45667789999999999999 6999999999999999
Q ss_pred EECCCCc--------eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEE
Q psy2671 276 WDSSTGK--------QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347 (573)
Q Consensus 276 wd~~~~~--------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~ 347 (573)
||++++. .....+.+|...|.++.|.|.. .+.++++++.||.|++||+..++.+..+... ..+..+.
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~- 160 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAH---LGLKLACLGNDGILRLYDALEPSDLRSWTLT-SEMKVLS- 160 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGG---GCSEEEEEETTCEEEEEECSSTTCTTCCEEE-EEEESCS-
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCC---CCcEEEEecCCCcEEEecCCChHHhcccccc-ccccccc-
Confidence 9998764 2234466899999999998731 1678999999999999999876543322100 0000000
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC
Q psy2671 348 GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP 427 (573)
Q Consensus 348 ~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (573)
....+|...+..++++++. .
T Consensus 161 --------------------------~~~~~~~~~~~~~~~~p~~----------------------------------~ 180 (351)
T 3f3f_A 161 --------------------------IPPANHLQSDFCLSWCPSR----------------------------------F 180 (351)
T ss_dssp --------------------------CCCSSCSCCCEEEEECCCS----------------------------------S
T ss_pred --------------------------cccCCcccceeEEEeccCC----------------------------------C
Confidence 0011233334444433210 1
Q ss_pred CCcEEEEEeCCCeEEEEcCCCCcc-ceeeeccccccEEEEEECCCC----CEEEEeeCCCcEEEEeCCCCeEEEeecCCc
Q psy2671 428 EGEKLVSGSDDFTLFLWNPEKEKK-SLARMTGHQQLINCVEFSPDG----RIIASASFDKSIKLWDGRIGKFITTLRGHV 502 (573)
Q Consensus 428 ~~~~l~sg~~dg~i~lwd~~~~~~-~~~~~~~h~~~v~~v~~sp~g----~~las~s~dg~i~lwd~~~~~~~~~~~~h~ 502 (573)
.+..+++++.++.+.+|+...... ....+.+|...|++++|+|++ ++|++|+.||.|++||.+.+........+.
T Consensus 181 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 260 (351)
T 3f3f_A 181 SPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESL 260 (351)
T ss_dssp SCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------
T ss_pred CCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcc
Confidence 256777888888777776554432 355667899999999999998 899999999999999998775544444444
Q ss_pred ceEEEEEECCCCCEEEEEe----CCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 503 QAVYMVAWSSDSRLLVSGS----ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 503 ~~v~~v~~s~dg~~las~s----~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
.......++++...++.+. ....+.+|+....+.+..+.+|.+.|++++|+|++++|++++.||.|++|+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 334 (351)
T 3f3f_A 261 TNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWK 334 (351)
T ss_dssp ------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred cceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 4444455555555544443 345567777777788888999999999999999999999999999999997
No 101
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-36 Score=298.10 Aligned_cols=263 Identities=22% Similarity=0.376 Sum_probs=210.0
Q ss_pred cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD 182 (573)
Q Consensus 103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (573)
...+.+|.++|++++|+|++++||+|+.|++|+|||+..+...
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~------------------------------------- 46 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK------------------------------------- 46 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEE-------------------------------------
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcce-------------------------------------
Confidence 3467789999999999999999999999999999998643210
Q ss_pred EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCC--CCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEc
Q psy2671 183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN--GRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWS 258 (573)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~--g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s 258 (573)
+...+.+|.+.|.+++|+|+ +++|++|+.|++|++||+.+++ .+..+.+|...|.+++|+
T Consensus 47 ----------------~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 110 (379)
T 3jrp_A 47 ----------------LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWA 110 (379)
T ss_dssp ----------------EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred ----------------eeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeC
Confidence 11235689999999999987 9999999999999999999886 677888999999999999
Q ss_pred CC--CCeEEEEeeCCeEEEEECCCCcee-cccccCCcccEEEEEeccccc--------CCCCCEEEEEeCCCcEEEEECC
Q psy2671 259 PD--SKQLVSGCKNGVIHAWDSSTGKQI-GQPMRGHKQWITALSWEPFHL--------NHQCRRFASSGKDGAIRIWDVI 327 (573)
Q Consensus 259 ~d--g~~l~sgs~dg~i~vwd~~~~~~~-~~~~~~h~~~v~~~~~~~~~~--------~~~~~~l~s~~~dg~v~iwd~~ 327 (573)
|+ +.+|++++.|+.|++||+..+... ...+.+|...|.++.|.|... ..++..+++++.||.|++||+.
T Consensus 111 ~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 190 (379)
T 3jrp_A 111 PHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 190 (379)
T ss_dssp CGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE
T ss_pred CCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec
Confidence 99 999999999999999999887432 234568999999999988421 1146789999999999999987
Q ss_pred CCe----EEEEecCCCccEEEEEECCC---c-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEc
Q psy2671 328 LSQ----CVRVLTSHTRSVTCIRWGGS---G-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT 399 (573)
Q Consensus 328 ~~~----~~~~~~~h~~~v~~~~~~~~---~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~ 399 (573)
.+. ....+.+|...|.+++|+++ + .+++++.|+.|++|+++++....
T Consensus 191 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~------------------------- 245 (379)
T 3jrp_A 191 SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW------------------------- 245 (379)
T ss_dssp TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCC-------------------------
T ss_pred CCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccc-------------------------
Confidence 653 44567788888999988876 4 57777778888888765431000
Q ss_pred CCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee
Q psy2671 400 STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479 (573)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s 479 (573)
.........|...|.+++|+|+|++|++++
T Consensus 246 --------------------------------------------------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 246 --------------------------------------------------KKTLLKEEKFPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp --------------------------------------------------EEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred --------------------------------------------------eeeeeccccCCCcEEEEEEcCCCCEEEEec
Confidence 001111234677899999999999999999
Q ss_pred CCCcEEEEeCCCCe
Q psy2671 480 FDKSIKLWDGRIGK 493 (573)
Q Consensus 480 ~dg~i~lwd~~~~~ 493 (573)
.||.|++||...+.
T Consensus 276 ~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 276 GDNKVTLWKENLEG 289 (379)
T ss_dssp SSSSEEEEEEEETT
T ss_pred CCCcEEEEeCCCCC
Confidence 99999999987543
No 102
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-37 Score=306.95 Aligned_cols=282 Identities=10% Similarity=0.119 Sum_probs=231.8
Q ss_pred CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecc
Q psy2671 207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ 286 (573)
Q Consensus 207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~ 286 (573)
...|.+++|||||+++||++.|++|+ |...++. +.+|...|.+++|+|+| .++.+.+|+.+... .
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~---l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~---~ 79 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKD---INCNSKNLFHVKEFPLE-------FENKLDFELAQQNG---L 79 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCCSC---CSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSC---S
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--cccccce---ecCCCccEEEEEECCCC-------CcceEEEEeCCCce---E
Confidence 57899999999999999999999999 7555543 47999999999999999 45555555543222 1
Q ss_pred cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc-----cEEEEEECCCc-EEEEEeCCC
Q psy2671 287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR-----SVTCIRWGGSG-LIYSASQDR 360 (573)
Q Consensus 287 ~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~-----~v~~~~~~~~~-~l~s~s~d~ 360 (573)
....|...|.+++|+| ++.++|+++.||.|++||... ++..+. |.. .+.+++|+++| .|++|+.||
T Consensus 80 ~~~~~~~~V~~vawSP-----dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DG 151 (588)
T 2j04_A 80 LNSQPVCYPRVCKPSP-----IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDG 151 (588)
T ss_dssp STTSCSCCEEEEEECS-----SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTS
T ss_pred eecCCCCcEEEEEECC-----CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCC
Confidence 1225688999999987 678999999999999999544 666667 665 59999999998 799999999
Q ss_pred eEEEEeCCCCee-------eEec----cCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC
Q psy2671 361 TIKVWRASDGVM-------CRTL----EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG 429 (573)
Q Consensus 361 ~i~vw~~~~~~~-------~~~~----~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (573)
+|++|++.++.. +.++ .+|..+|.++++++ +|
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-------------------------------------dg 194 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-------------------------------------DV 194 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-------------------------------------TE
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC-------------------------------------Cc
Confidence 999999998752 4565 77888999998874 46
Q ss_pred cEEEEEeCCCeEEEEcCCCCcc--ceeee-ccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEE
Q psy2671 430 EKLVSGSDDFTLFLWNPEKEKK--SLARM-TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506 (573)
Q Consensus 430 ~~l~sg~~dg~i~lwd~~~~~~--~~~~~-~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~ 506 (573)
+++++.|+++++||+..... ....+ .+|...|.+++|+ |+.||+++ +++|++||...++......+|...|+
T Consensus 195 --Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~ 269 (588)
T 2j04_A 195 --LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFH 269 (588)
T ss_dssp --EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCC
T ss_pred --EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEE
Confidence 88899999999999977653 22345 4788899999999 68999997 69999999998877444448999999
Q ss_pred EEEE--CCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 507 MVAW--SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 507 ~v~~--s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
.++| +||+..|++++.||+ ++|... .++++||+..+++. |+++++|+
T Consensus 270 ~va~~~s~d~~~La~a~edG~-klw~~d----------------~~~~spd~~l~a~~--d~~v~lW~ 318 (588)
T 2j04_A 270 IIPLNHEKESTILLMSNKTSY-KVLLED----------------ELHVTADNIIAPYL--EKKFKKWS 318 (588)
T ss_dssp EEEETTCSSCEEEEECSSCEE-EEEESS----------------SEEEECCCSSHHHH--HHHHHHTT
T ss_pred EEEeeeCCCCCEEEEEcCCCC-EEEeec----------------cEEECCCceEEEEc--CCEEEEEE
Confidence 9999 999999999999999 999876 15699999877664 89999986
No 103
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-36 Score=305.39 Aligned_cols=302 Identities=13% Similarity=0.216 Sum_probs=239.9
Q ss_pred CCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCC---Ce---eeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEE
Q psy2671 204 PGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTT---QT---PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276 (573)
Q Consensus 204 ~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~---~~---~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vw 276 (573)
.+|.+.|++++|+| ++++||+|+.|++|+|||+.+ +. ....+ +|...|.+++|+|++++|++|+.||.|++|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw 138 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVL 138 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Confidence 68999999999999 999999999999999999876 32 22332 589999999999999999999999999999
Q ss_pred ECC---CCceecccccCCcccEEEEEeccc-----------ccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC--CCc
Q psy2671 277 DSS---TGKQIGQPMRGHKQWITALSWEPF-----------HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS--HTR 340 (573)
Q Consensus 277 d~~---~~~~~~~~~~~h~~~v~~~~~~~~-----------~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--h~~ 340 (573)
|++ .++... ...+| .+..+.+.|. ...+++..+++++.||.|++||+.+++++..+.. |..
T Consensus 139 d~~~~~~~~~~~-~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~ 215 (437)
T 3gre_A 139 KVNHYQQESEVK-FLNCE--CIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG 215 (437)
T ss_dssp EEEEEEETTEEE-EEEEE--EEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC
T ss_pred EeccccCCceee-ccccc--eeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC
Confidence 985 444321 11222 3334443331 1234678999999999999999999999999888 899
Q ss_pred cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEecc-CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671 341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLE-GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418 (573)
Q Consensus 341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (573)
.|.+++|++++ .+++|+.|++|++||++++.....+. +|...|..+++++.
T Consensus 216 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------------- 268 (437)
T 3gre_A 216 AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF--------------------------- 268 (437)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT---------------------------
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccc---------------------------
Confidence 99999999877 79999999999999999999888876 77778888876643
Q ss_pred hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee
Q psy2671 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL 498 (573)
Q Consensus 419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~ 498 (573)
.++++.++++|+.||+|++||+++.. ....+.+|...+..+.|+|+++.+ .+. .+
T Consensus 269 ------~s~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l----~~~--------------~~ 323 (437)
T 3gre_A 269 ------YGKNSVIVVGGSSKTFLTIWNFVKGH-CQYAFINSDEQPSMEHFLPIEKGL----EEL--------------NF 323 (437)
T ss_dssp ------TCTTEEEEEEESTTEEEEEEETTTTE-EEEEEESSSSCCCGGGGSCBCSSG----GGC--------------CC
T ss_pred ------cCCCccEEEEEcCCCcEEEEEcCCCc-EEEEEEcCCCCCccceeccccccc----ccc--------------ee
Confidence 12567899999999999999998654 466777888888888999987665 111 13
Q ss_pred cC--CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCC---CEEEEEEccCCCEEEEe
Q psy2671 499 RG--HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD---EVYAVDWAPDGEKVASG 562 (573)
Q Consensus 499 ~~--h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~---~v~~~~~s~d~~~l~s~ 562 (573)
.+ |...|++++|+ ++++|++|+.|+.|++||+.+++....+.+|.. .+....++++..+++..
T Consensus 324 ~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (437)
T 3gre_A 324 CGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK 391 (437)
T ss_dssp CCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE
T ss_pred cccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEe
Confidence 44 88899999999 889999999999999999999998888887643 34555666655544433
No 104
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-35 Score=289.85 Aligned_cols=264 Identities=18% Similarity=0.353 Sum_probs=214.0
Q ss_pred cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECC--CCeeeEEecCCCCcEEEEEEcCC--CCeEEEEeeCCeEEEE
Q psy2671 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT--TQTPLFKCEGHKHWVLCIAWSPD--SKQLVSGCKNGVIHAW 276 (573)
Q Consensus 201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~--~~~~~~~~~~h~~~V~~v~~s~d--g~~l~sgs~dg~i~vw 276 (573)
..+.||.+.|++++|+|++++||+|+.|+.|+|||+. ++..+..+.+|...|.+++|+|+ +++|++|+.||.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 4567899999999999999999999999999999998 55667788999999999999987 8999999999999999
Q ss_pred ECCCCce-ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe--EEEEecCCCccEEEEEECCCcEE
Q psy2671 277 DSSTGKQ-IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ--CVRVLTSHTRSVTCIRWGGSGLI 353 (573)
Q Consensus 277 d~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~l 353 (573)
|+.+++. ....+.+|...|.+++|.|.. .++.+++++.||.|++||+.... ....+..|...|.+++|++....
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWAPHE---YGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGG---GCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--
T ss_pred EcCCCceeEeeeecCCCcceEEEEeCCCC---CCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccc
Confidence 9998862 224566799999999998731 16789999999999999998763 34456678888888888764211
Q ss_pred EEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671 354 YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV 433 (573)
Q Consensus 354 ~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 433 (573)
..+.. ...+++..++
T Consensus 162 ~~~~~-----------------------------------------------------------------~~~~~~~~l~ 176 (379)
T 3jrp_A 162 EDGEH-----------------------------------------------------------------NGTKESRKFV 176 (379)
T ss_dssp -------------------------------------------------------------------------CTTCEEE
T ss_pred ccccc-----------------------------------------------------------------cCCCCCCEEE
Confidence 00000 0014567788
Q ss_pred EEeCCCeEEEEcCCCCcc---ceeeeccccccEEEEEECCC---CCEEEEeeCCCcEEEEeCCCCe-----EEEeecCCc
Q psy2671 434 SGSDDFTLFLWNPEKEKK---SLARMTGHQQLINCVEFSPD---GRIIASASFDKSIKLWDGRIGK-----FITTLRGHV 502 (573)
Q Consensus 434 sg~~dg~i~lwd~~~~~~---~~~~~~~h~~~v~~v~~sp~---g~~las~s~dg~i~lwd~~~~~-----~~~~~~~h~ 502 (573)
+++.|+.|++||++.... ....+.+|...|.+++|+|+ +++|++++.||.|++||.++++ .+.....|.
T Consensus 177 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 256 (379)
T 3jrp_A 177 TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP 256 (379)
T ss_dssp EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCS
T ss_pred EEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCC
Confidence 888888888888765432 34567789999999999999 8999999999999999998863 223334588
Q ss_pred ceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671 503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532 (573)
Q Consensus 503 ~~v~~v~~s~dg~~las~s~D~~v~vwd~~ 532 (573)
..|++++|+|+|++|++++.|+.|++|++.
T Consensus 257 ~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 257 DVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp SCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 899999999999999999999999999986
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.1e-34 Score=291.84 Aligned_cols=287 Identities=19% Similarity=0.301 Sum_probs=224.4
Q ss_pred EEEEEEcCCCCe-eEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeE
Q psy2671 113 VISVKFSPNGRS-LASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVF 191 (573)
Q Consensus 113 V~~l~~s~~~~~-lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (573)
...++++|+... +++++.||.|+|||+.+...+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~---------------------------------------------- 70 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRV---------------------------------------------- 70 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEEC----------------------------------------------
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCC----------------------------------------------
Confidence 345788888754 456899999999998643211
Q ss_pred EEeeccccccCCCCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCCC-------eeeEEecCCCCcEEEEEEcCCC-C
Q psy2671 192 QVRPVTRCTSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQ-------TPLFKCEGHKHWVLCIAWSPDS-K 262 (573)
Q Consensus 192 ~~~~~~~~~~~~~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~-------~~~~~~~~h~~~V~~v~~s~dg-~ 262 (573)
......+.+|.+.|.+++|+| ++++|++|+.|++|+|||+.++ +++..+.+|...|.+++|+|++ .
T Consensus 71 -----~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 145 (402)
T 2aq5_A 71 -----DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQN 145 (402)
T ss_dssp -----CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTT
T ss_pred -----CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCC
Confidence 011234678999999999999 8999999999999999999987 5678889999999999999998 6
Q ss_pred eEEEEeeCCeEEEEECCCCceecccc-cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCc
Q psy2671 263 QLVSGCKNGVIHAWDSSTGKQIGQPM-RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-TSHTR 340 (573)
Q Consensus 263 ~l~sgs~dg~i~vwd~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~h~~ 340 (573)
+|++|+.||.|++||+++++.+.... .+|...|.+++|.| ++++|++++.||.|++||+.+++.+..+ ..|..
T Consensus 146 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 220 (402)
T 2aq5_A 146 VLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-----DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEG 220 (402)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-----TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCS
T ss_pred EEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC-----CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCC
Confidence 99999999999999999987664332 78999999999987 5678999999999999999998888877 67776
Q ss_pred c-EEEEEECCCcE-EEEE---eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhh
Q psy2671 341 S-VTCIRWGGSGL-IYSA---SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS 415 (573)
Q Consensus 341 ~-v~~~~~~~~~~-l~s~---s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (573)
. +.++.|++++. +++| +.|+.|++||++++
T Consensus 221 ~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~--------------------------------------------- 255 (402)
T 2aq5_A 221 TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHL--------------------------------------------- 255 (402)
T ss_dssp SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBC---------------------------------------------
T ss_pred CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccc---------------------------------------------
Confidence 5 77777776663 3444 45666666665432
Q ss_pred hhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcccee-eeccccccEEEEEECCCCCEEEE-eeCCCcEEEEeCCCCe
Q psy2671 416 KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA-RMTGHQQLINCVEFSPDGRIIAS-ASFDKSIKLWDGRIGK 493 (573)
Q Consensus 416 ~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~-~~~~h~~~v~~v~~sp~g~~las-~s~dg~i~lwd~~~~~ 493 (573)
..... ....|...+.+++|+|++++|++ |+.||.|++||..+++
T Consensus 256 ----------------------------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 256 ----------------------------------EEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp ----------------------------------SSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred ----------------------------------cCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 21111 11235567899999999999875 5579999999999877
Q ss_pred E-EEeecC--CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc
Q psy2671 494 F-ITTLRG--HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI 536 (573)
Q Consensus 494 ~-~~~~~~--h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~ 536 (573)
. +..+.. |...|.+++|+|++.++++ .|+.+++|++.++++
T Consensus 302 ~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 302 PFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp TCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred cceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 3 444443 4588999999999998874 567999999987643
No 106
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=4e-34 Score=282.20 Aligned_cols=286 Identities=14% Similarity=0.177 Sum_probs=206.8
Q ss_pred EEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEE
Q psy2671 233 FWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312 (573)
Q Consensus 233 iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l 312 (573)
||++.+..++....+|...|++++|+|||++|++|+.++ +++|+..++...... +...+..+.+.+ .++.+
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~---~~~~~~~~~~~~-----~~~~~ 73 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ---EMRHLSKVRMLH-----RTNYV 73 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE---ECSCCCEEEECT-----TSSEE
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee---ecCCeEEEEEcC-----CCCEE
Confidence 567777778777889999999999999999999988775 789998876544221 111244455443 23444
Q ss_pred -EEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCC-eeeEeccCCcceeeEEEecc
Q psy2671 313 -ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDG-VMCRTLEGHAHWVNTLALST 390 (573)
Q Consensus 313 -~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~-~~~~~~~~~~~~v~~~~~s~ 390 (573)
++++.|++|++||..+++++..+. |...|.++.++++..+++ .|+.|++|++.++ ..+..+.. .....++
T Consensus 74 ~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~--~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~-- 145 (355)
T 3vu4_A 74 AFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVS--YGDVISVFKFGNPWKRITDDIR---FGGVCEF-- 145 (355)
T ss_dssp EEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEE--ETTEEEEEESSTTCCBSSCCEE---EEEEEEE--
T ss_pred EEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEE--EcCEEEEEECCCCceeeEEecc---CCceEEE--
Confidence 667888999999999999888876 566899999988764433 4889999999887 54443332 1111111
Q ss_pred CceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE--EeCCCeEEEEcCCCCc--------------cc-e
Q psy2671 391 DYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS--GSDDFTLFLWNPEKEK--------------KS-L 453 (573)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--g~~dg~i~lwd~~~~~--------------~~-~ 453 (573)
++ .+++. |+.||+|++||+.+.. .+ .
T Consensus 146 -----------------------------------s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~ 188 (355)
T 3vu4_A 146 -----------------------------------SN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKG 188 (355)
T ss_dssp -----------------------------------ET--TEEEEEESSCTTCEEEEECCC------------------CC
T ss_pred -----------------------------------Ec--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCccc
Confidence 12 34554 6899999999998654 11 5
Q ss_pred eeeccccccEEEEEECCCCCEEEEeeCCCc-EEEEeCCCCeEEEeec-C-CcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671 454 ARMTGHQQLINCVEFSPDGRIIASASFDKS-IKLWDGRIGKFITTLR-G-HVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530 (573)
Q Consensus 454 ~~~~~h~~~v~~v~~sp~g~~las~s~dg~-i~lwd~~~~~~~~~~~-~-h~~~v~~v~~s~dg~~las~s~D~~v~vwd 530 (573)
..+.+|...|++++|+|+|++||+|+.||+ |++||.++++.+..+. + |...|++++|+|||++|++++.|++|++||
T Consensus 189 ~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 189 VLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFE 268 (355)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred EEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence 678899999999999999999999999998 9999999999999998 6 999999999999999999999999999999
Q ss_pred CCcccccc--ccc---------------------CcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 531 MKTKKIEQ--DLP---------------------GHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 531 ~~~~~~~~--~l~---------------------~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
++...... .+. .+......++|++|++.|++++.||.+++|+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 269 IFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFK 333 (355)
T ss_dssp SSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEE
T ss_pred ccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 97653211 111 1122346789999999999999999999985
No 107
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-34 Score=312.67 Aligned_cols=262 Identities=22% Similarity=0.376 Sum_probs=209.0
Q ss_pred ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183 (573)
Q Consensus 104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (573)
..+.||.++|++++|+|++++||+|+.||+|+|||+.++...
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~-------------------------------------- 44 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK-------------------------------------- 44 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEE--------------------------------------
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCc--------------------------------------
Confidence 357799999999999999999999999999999998743210
Q ss_pred EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCC--CCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcC
Q psy2671 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN--GRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSP 259 (573)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~--g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~ 259 (573)
+...+.+|.++|.+++|+|+ +++|++|+.||+|++||+.++. .+....+|...|.+++|+|
T Consensus 45 ---------------~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp 109 (753)
T 3jro_A 45 ---------------LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP 109 (753)
T ss_dssp ---------------EEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC
T ss_pred ---------------cceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECC
Confidence 11235689999999999988 9999999999999999999886 6777889999999999999
Q ss_pred C--CCeEEEEeeCCeEEEEECCCCcee-cccccCCcccEEEEEeccccc--------CCCCCEEEEEeCCCcEEEEECCC
Q psy2671 260 D--SKQLVSGCKNGVIHAWDSSTGKQI-GQPMRGHKQWITALSWEPFHL--------NHQCRRFASSGKDGAIRIWDVIL 328 (573)
Q Consensus 260 d--g~~l~sgs~dg~i~vwd~~~~~~~-~~~~~~h~~~v~~~~~~~~~~--------~~~~~~l~s~~~dg~v~iwd~~~ 328 (573)
+ ++.+++|+.||.|++||+.++... ...+.+|...|.++.|.|... ..++..+++++.||.|++||+..
T Consensus 110 ~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~ 189 (753)
T 3jro_A 110 HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS 189 (753)
T ss_dssp GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEET
T ss_pred CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccC
Confidence 9 999999999999999999877432 234568999999999988421 11467899999999999999876
Q ss_pred C----eEEEEecCCCccEEEEEECCC---c-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcC
Q psy2671 329 S----QCVRVLTSHTRSVTCIRWGGS---G-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATS 400 (573)
Q Consensus 329 ~----~~~~~~~~h~~~v~~~~~~~~---~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~ 400 (573)
+ .....+.+|...|.+++|+++ + .+++++.|++|++||+.++....
T Consensus 190 ~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~-------------------------- 243 (753)
T 3jro_A 190 DAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW-------------------------- 243 (753)
T ss_dssp TTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCC--------------------------
T ss_pred CcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcc--------------------------
Confidence 6 456677889999999999876 4 57778888888888765431100
Q ss_pred CCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC
Q psy2671 401 TGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480 (573)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~ 480 (573)
........+|...|.+++|+|+|+++++|+.
T Consensus 244 -------------------------------------------------~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~ 274 (753)
T 3jro_A 244 -------------------------------------------------KKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (753)
T ss_dssp -------------------------------------------------BCCBSSSSCCSSCCCCEEECTTTCCEEEECS
T ss_pred -------------------------------------------------eeEEeccCCCCCceEEEEEcCCCCEEEEEcC
Confidence 0011222356778999999999999999999
Q ss_pred CCcEEEEeCCCCe
Q psy2671 481 DKSIKLWDGRIGK 493 (573)
Q Consensus 481 dg~i~lwd~~~~~ 493 (573)
||.|++||..++.
T Consensus 275 Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 275 DNKVTLWKENLEG 287 (753)
T ss_dssp SSCEECCBCCSSS
T ss_pred CCEEEEEecCCCC
Confidence 9999999988643
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.4e-34 Score=287.96 Aligned_cols=265 Identities=12% Similarity=0.075 Sum_probs=181.5
Q ss_pred CCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCcee----cccccCCcccEEEEEeccccc---CCCCCEEEEEeCCCc
Q psy2671 248 HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI----GQPMRGHKQWITALSWEPFHL---NHQCRRFASSGKDGA 320 (573)
Q Consensus 248 h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~----~~~~~~h~~~v~~~~~~~~~~---~~~~~~l~s~~~dg~ 320 (573)
|...+....+++++.+|++|+.|++|++||.+++... ...+.||...|.+++|.|... ..++++|+++|.|++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence 3344455567778889999999999999999887543 245789999999999998532 125679999999999
Q ss_pred EEEEECCCCeEEEEecCCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEE
Q psy2671 321 IRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398 (573)
Q Consensus 321 v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~ 398 (573)
||+||+..+.+...+..|...+.+++|+|++ .+++++.|++|++||++++........+......
T Consensus 168 v~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~------------- 234 (393)
T 4gq1_A 168 LIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP------------- 234 (393)
T ss_dssp EEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC-------------
T ss_pred EEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc-------------
Confidence 9999999888888888899999999999875 6999999999999999887654433322111000
Q ss_pred cCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEEC-CCCCEEEE
Q psy2671 399 TSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFS-PDGRIIAS 477 (573)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~s-p~g~~las 477 (573)
...+..... ........+|...+.+++|+ |+|+.|++
T Consensus 235 --------------------------------~~~s~~~~~----------~~~~~~~~~~~~~v~~v~~~~~dg~~l~s 272 (393)
T 4gq1_A 235 --------------------------------WLLTLNTLP----------LVNTCHSSGIASSLANVRWIGSDGSGILA 272 (393)
T ss_dssp --------------------------------CSEEEESGG----------GC------CCSSSCSEEEEETTTTCEEEE
T ss_pred --------------------------------eEEeccccc----------ceeeeecccccccceeeeeecCCCCEEEE
Confidence 000000000 00111234677788899986 79999999
Q ss_pred eeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECC--------------------CCCEEEEEeCCCcEEEEeCCccccc
Q psy2671 478 ASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS--------------------DSRLLVSGSADSTLKVWNMKTKKIE 537 (573)
Q Consensus 478 ~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~--------------------dg~~las~s~D~~v~vwd~~~~~~~ 537 (573)
++.|+++++||+.+++....+..|...+..+.++| ++.++++|+.|++|++||+.+++..
T Consensus 273 ~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 273 MCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp ECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCC
T ss_pred EeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 99999999999998877777766665555444433 3446788889999999999999888
Q ss_pred ccccCcCCCEEEEEEccCCCEEEEeeCCCc
Q psy2671 538 QDLPGHGDEVYAVDWAPDGEKVASGGKDKV 567 (573)
Q Consensus 538 ~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~ 567 (573)
..+.+|...|.+++|||||++||+++.||.
T Consensus 353 ~~~~~~~~~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 353 SIPIQLGMPIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEESSEE
T ss_pred EEecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 888889999999999999999999998885
No 109
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.1e-33 Score=284.52 Aligned_cols=277 Identities=19% Similarity=0.367 Sum_probs=220.0
Q ss_pred EEEEEcCCCCeE-EEEeCCCeEEEEECCCCe----eeEEecCCCCcEEEEEEcC-CCCeEEEEeeCCeEEEEECCCCce-
Q psy2671 211 ISVKFSPNGRSL-ASGSGDTTVRFWDVTTQT----PLFKCEGHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWDSSTGKQ- 283 (573)
Q Consensus 211 ~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~----~~~~~~~h~~~V~~v~~s~-dg~~l~sgs~dg~i~vwd~~~~~~- 283 (573)
..++++|+...+ ++++.||.|+||++.... .+..+.+|...|.+++|+| ++++|++|+.||.|++||+.++..
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~ 117 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV 117 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc
Confidence 357889886544 457899999999986542 3445779999999999999 999999999999999999988742
Q ss_pred -----ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe--cCCCccEEEEEECCCc-EEEE
Q psy2671 284 -----IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL--TSHTRSVTCIRWGGSG-LIYS 355 (573)
Q Consensus 284 -----~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~--~~h~~~v~~~~~~~~~-~l~s 355 (573)
....+.+|...|.+++|.|.. .+.+++++.||.|++||+.+++.+..+ ..|...|.+++|++++ .+++
T Consensus 118 ~~~~~~~~~~~~h~~~v~~~~~~p~~----~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 193 (402)
T 2aq5_A 118 LPLREPVITLEGHTKRVGIVAWHPTA----QNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICT 193 (402)
T ss_dssp SCBCSCSEEEECCSSCEEEEEECSSB----TTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEE
T ss_pred cccCCceEEecCCCCeEEEEEECcCC----CCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEE
Confidence 223567899999999998731 258999999999999999999998888 7899999999998765 5777
Q ss_pred EeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEE
Q psy2671 356 ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG 435 (573)
Q Consensus 356 ~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg 435 (573)
++.|+.|++||++++.....+
T Consensus 194 ~~~d~~i~iwd~~~~~~~~~~----------------------------------------------------------- 214 (402)
T 2aq5_A 194 SCRDKRVRVIEPRKGTVVAEK----------------------------------------------------------- 214 (402)
T ss_dssp EETTSEEEEEETTTTEEEEEE-----------------------------------------------------------
T ss_pred EecCCcEEEEeCCCCceeeee-----------------------------------------------------------
Confidence 778888888877655433222
Q ss_pred eCCCeEEEEcCCCCccceeeecccccc-EEEEEECCCCCEEEEe---eCCCcEEEEeCCCCeE-EEee-cCCcceEEEEE
Q psy2671 436 SDDFTLFLWNPEKEKKSLARMTGHQQL-INCVEFSPDGRIIASA---SFDKSIKLWDGRIGKF-ITTL-RGHVQAVYMVA 509 (573)
Q Consensus 436 ~~dg~i~lwd~~~~~~~~~~~~~h~~~-v~~v~~sp~g~~las~---s~dg~i~lwd~~~~~~-~~~~-~~h~~~v~~v~ 509 (573)
..+|... +.+++|+|++++|++| +.|+.|++||.++++. +... ..|...+.+++
T Consensus 215 --------------------~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 215 --------------------DRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp --------------------ECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEE
T ss_pred --------------------ccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEE
Confidence 0234333 7789999999999999 7999999999988654 2222 24667899999
Q ss_pred ECCCCCEEEE-EeCCCcEEEEeCCcccc-cccccC--cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 510 WSSDSRLLVS-GSADSTLKVWNMKTKKI-EQDLPG--HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 510 ~s~dg~~las-~s~D~~v~vwd~~~~~~-~~~l~~--h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
|+|++++|++ ++.|+.|++||+.+++. +..+.. |.+.|.+++|+|++.++++ .|+.+++|+
T Consensus 275 ~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~ 339 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYK 339 (402)
T ss_dssp EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEE
T ss_pred EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEE
Confidence 9999999875 55799999999998874 444444 4589999999999988764 566899996
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-33 Score=282.10 Aligned_cols=277 Identities=14% Similarity=0.120 Sum_probs=215.1
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe---eeEEec--------------------------------------
Q psy2671 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT---PLFKCE-------------------------------------- 246 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~---~~~~~~-------------------------------------- 246 (573)
.++.+++|+|+|++|+++ .++.|++||+.+++ .+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 467899999999966665 57799999998887 544443
Q ss_pred ----------------CCCCcEEEEEEcCCCCeE-EEEeeCCeEEEEECC--CCceeccccc--CCcccEEEEEeccccc
Q psy2671 247 ----------------GHKHWVLCIAWSPDSKQL-VSGCKNGVIHAWDSS--TGKQIGQPMR--GHKQWITALSWEPFHL 305 (573)
Q Consensus 247 ----------------~h~~~V~~v~~s~dg~~l-~sgs~dg~i~vwd~~--~~~~~~~~~~--~h~~~v~~~~~~~~~~ 305 (573)
+|...|.+++|+|++++| ++|+.||.|++||+. ++..+. .+. .|...|.+++|.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~~~~sp--- 159 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLK-LRKRFCFSKRPNAISIAE--- 159 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEE-EEEEEECSSCEEEEEECT---
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceee-eeecccCCCCceEEEEcC---
Confidence 234479999999999996 899999999999998 666543 233 5678899999977
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCCeEEE----EecCCCccEEEEEECCC---c-EEEEEeCCCeEEEEeCCCCeeeEecc
Q psy2671 306 NHQCRRFASSGKDGAIRIWDVILSQCVR----VLTSHTRSVTCIRWGGS---G-LIYSASQDRTIKVWRASDGVMCRTLE 377 (573)
Q Consensus 306 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~----~~~~h~~~v~~~~~~~~---~-~l~s~s~d~~i~vw~~~~~~~~~~~~ 377 (573)
++++|++++.+|.+++|++....... .+.+|...|.+++|+++ + .+++++.|++|++||+.++
T Consensus 160 --~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~------- 230 (450)
T 2vdu_B 160 --DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC------- 230 (450)
T ss_dssp --TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT-------
T ss_pred --CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC-------
Confidence 56899999999999999998766443 66678888888888765 4 5666666666666665432
Q ss_pred CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec
Q psy2671 378 GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT 457 (573)
Q Consensus 378 ~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~ 457 (573)
......+.
T Consensus 231 ------------------------------------------------------------------------~~~~~~~~ 238 (450)
T 2vdu_B 231 ------------------------------------------------------------------------FIVDKWLF 238 (450)
T ss_dssp ------------------------------------------------------------------------TCEEEECC
T ss_pred ------------------------------------------------------------------------ceeeeeec
Confidence 21112244
Q ss_pred cccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC-------------------------cceEEEEEECC
Q psy2671 458 GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH-------------------------VQAVYMVAWSS 512 (573)
Q Consensus 458 ~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h-------------------------~~~v~~v~~s~ 512 (573)
+|...|.+++|+ ++++|++++.|+.|++||.++++.+..+..+ ...|.+++|+|
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 688889999999 9999999999999999999999988777532 34689999999
Q ss_pred CCCEEEEEe-CCCcEEEEeC--Ccc---cccccccCcCCCEEEEEEccCCCEEEEeeC------CCcEEEcc
Q psy2671 513 DSRLLVSGS-ADSTLKVWNM--KTK---KIEQDLPGHGDEVYAVDWAPDGEKVASGGK------DKVLRLWQ 572 (573)
Q Consensus 513 dg~~las~s-~D~~v~vwd~--~~~---~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~------d~~i~iw~ 572 (573)
++++|++++ .|+.|++|++ ..+ +.+..+.+| +.|.+++|+|++.+++.++. +..|++|.
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~ 388 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIE 388 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEE
Confidence 999999998 8999999999 555 566777888 88999999996433333343 44577774
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-32 Score=278.28 Aligned_cols=360 Identities=13% Similarity=0.055 Sum_probs=238.0
Q ss_pred cccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCc---ceeeecCCCee-eeecccccccccccccCCCCCC-ccceEEEE
Q psy2671 110 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT---PLFKCEGTPYL-FYVNETEITKTLADVLPLDTLN-TEEVVDIV 184 (573)
Q Consensus 110 ~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 184 (573)
..++.+++|+|+|++|+++ .++.|++||+.+++ .+......... ..+........ ...+.... .+......
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 79 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQ---QGQSSENENENKKLKSN 79 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhh---ccccccccccccccccC
Confidence 4578899999999977665 57899999999998 54433221100 00000000000 00000000 00000000
Q ss_pred EeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeE-EEEeCCCeEEEEECC--CCeeeEEec--CCCCcEEEEEEcC
Q psy2671 185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL-ASGSGDTTVRFWDVT--TQTPLFKCE--GHKHWVLCIAWSP 259 (573)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~l-as~s~d~~i~iwd~~--~~~~~~~~~--~h~~~V~~v~~s~ 259 (573)
...................++|.+.|.+++|+|++++| ++|+.|++|+|||+. ++..+..+. .|...|.+++|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE 159 (450)
T ss_dssp --------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT
T ss_pred cCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC
Confidence 00000000000011123456889999999999999996 899999999999998 777776665 6778899999999
Q ss_pred CCCeEEEEeeCCeEEEEECCCCceec---ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE-e
Q psy2671 260 DSKQLVSGCKNGVIHAWDSSTGKQIG---QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV-L 335 (573)
Q Consensus 260 dg~~l~sgs~dg~i~vwd~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~ 335 (573)
++++|++|+.+|.+++|++.++.... ..+.+|...|.+++|.|.. ..+++|++++.|++|++||+.+++.+.. +
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~--~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 237 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDS--DGHQFIITSDRDEHIKISHYPQCFIVDKWL 237 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECT--TSCEEEEEEETTSCEEEEEESCTTCEEEEC
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCC--CCCcEEEEEcCCCcEEEEECCCCceeeeee
Confidence 99999999999999999998776432 2567899999999998731 1167899999999999999998887776 6
Q ss_pred cCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhh
Q psy2671 336 TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEES 414 (573)
Q Consensus 336 ~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (573)
.+|...|.+++|+ ++ .+++++.|++|++||+.++.....+..+.. +..+.+..
T Consensus 238 ~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~-~~~~~~~~------------------------ 291 (450)
T 2vdu_B 238 FGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSL-IKPYLNDQ------------------------ 291 (450)
T ss_dssp CCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHH-HGGGCCTT------------------------
T ss_pred cCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhh-hhhhhhhc------------------------
Confidence 6899999999999 65 899999999999999999877665543210 00000000
Q ss_pred hhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee-CCCcEEEEeC--CC
Q psy2671 415 SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS-FDKSIKLWDG--RI 491 (573)
Q Consensus 415 ~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s-~dg~i~lwd~--~~ 491 (573)
..+.. .+. ..........|.+++|+|++++|++++ .|+.|++||+ ..
T Consensus 292 ----------~~~~~-~~~-------------------~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~ 341 (450)
T 2vdu_B 292 ----------HLAPP-RFQ-------------------NENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQ 341 (450)
T ss_dssp ----------SBC------------------------------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSS
T ss_pred ----------ccccc-ccc-------------------ccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCC
Confidence 00000 000 000012245689999999999999998 8999999999 56
Q ss_pred C---eEEEeecCCcceEEEEEECCCCCEEEEEeC------CCcEEEEeCC
Q psy2671 492 G---KFITTLRGHVQAVYMVAWSSDSRLLVSGSA------DSTLKVWNMK 532 (573)
Q Consensus 492 ~---~~~~~~~~h~~~v~~v~~s~dg~~las~s~------D~~v~vwd~~ 532 (573)
+ +.+..+.+| ..|.+++|+|++.++++++. +..|++|.+.
T Consensus 342 ~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 342 KGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp TTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred CCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 5 677788888 78999999996544444443 5568999764
No 112
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-33 Score=274.67 Aligned_cols=273 Identities=12% Similarity=0.048 Sum_probs=214.3
Q ss_pred EEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCc
Q psy2671 213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHK 292 (573)
Q Consensus 213 ~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~ 292 (573)
..+.+++.++++|+.|++|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+...
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~------------ 104 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGN------------ 104 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTT------------
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccC------------
Confidence 3455678899999999999999999988777665 456788889887 99999999999998642
Q ss_pred ccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCccEEEEEECC--Cc-EEEEEeCCCeEEEEeCC
Q psy2671 293 QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT-SHTRSVTCIRWGG--SG-LIYSASQDRTIKVWRAS 368 (573)
Q Consensus 293 ~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~h~~~v~~~~~~~--~~-~l~s~s~d~~i~vw~~~ 368 (573)
.+.+|+..+++.++.+. .|...|.+++|++ ++ .+++++.|++|++||++
T Consensus 105 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~ 157 (343)
T 3lrv_A 105 ---------------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYE 157 (343)
T ss_dssp ---------------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESS
T ss_pred ---------------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECC
Confidence 24567777766555443 7778999999998 66 78899999999999999
Q ss_pred CCeeeEeccC-CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCC
Q psy2671 369 DGVMCRTLEG-HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447 (573)
Q Consensus 369 ~~~~~~~~~~-~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~ 447 (573)
++........ |...+.+++++ |++.++++|+.||.|++||++
T Consensus 158 ~~~~~~~~~~~~~~~i~~~~~~-------------------------------------pdg~~lasg~~dg~i~iwd~~ 200 (343)
T 3lrv_A 158 DDSQYIVHSAKSDVEYSSGVLH-------------------------------------KDSLLLALYSPDGILDVYNLS 200 (343)
T ss_dssp SSCEEEEECCCSSCCCCEEEEC-------------------------------------TTSCEEEEECTTSCEEEEESS
T ss_pred CCcEEEEEecCCCCceEEEEEC-------------------------------------CCCCEEEEEcCCCEEEEEECC
Confidence 9887665533 34456666655 668899999999999999998
Q ss_pred CCccceeeecc-ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC---CcceEE--EEEECCCCCEEEEEe
Q psy2671 448 KEKKSLARMTG-HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG---HVQAVY--MVAWSSDSRLLVSGS 521 (573)
Q Consensus 448 ~~~~~~~~~~~-h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~---h~~~v~--~v~~s~dg~~las~s 521 (573)
+.......+.+ |...|++++|+|+|.+|++++ |+.|++||+++++.+..+.. |...+. +++|+|+|++|++++
T Consensus 201 ~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 201 SPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp CTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEE
T ss_pred CCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEec
Confidence 87655356666 999999999999999999999 55999999998876555443 434443 699999999999999
Q ss_pred C-CCcEEEEeCCcccccccccCcCCCEEEEEEcc---CCCEEEEeeCCCcEEEc
Q psy2671 522 A-DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAP---DGEKVASGGKDKVLRLW 571 (573)
Q Consensus 522 ~-D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~---d~~~l~s~~~d~~i~iw 571 (573)
. |+.|++|++......... .++..+.|++ +.+.|++++.|+.++++
T Consensus 280 ~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 280 NESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp TTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred CCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEE
Confidence 8 999999999665433222 4677888888 88899999999988876
No 113
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-32 Score=270.67 Aligned_cols=253 Identities=18% Similarity=0.292 Sum_probs=211.4
Q ss_pred CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC
Q psy2671 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281 (573)
Q Consensus 202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~ 281 (573)
.+.||.+.|++++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.++
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 106 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNG 106 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 46699999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ceecccccCCcccEEEEEecccccCCCCCEEEEEeCC-----CcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEE
Q psy2671 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD-----GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSA 356 (573)
Q Consensus 282 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~ 356 (573)
+.+... . +...+.++.|.| +++.+++++.+ |.|++||+........+
T Consensus 107 ~~~~~~-~-~~~~v~~~~~~~-----~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~--------------------- 158 (369)
T 3zwl_B 107 QCVATW-K-SPVPVKRVEFSP-----CGNYFLAILDNVMKNPGSINIYEIERDSATHEL--------------------- 158 (369)
T ss_dssp CEEEEE-E-CSSCEEEEEECT-----TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCE---------------------
T ss_pred cEEEEe-e-cCCCeEEEEEcc-----CCCEEEEecCCccCCCCEEEEEEecCCccceee---------------------
Confidence 766433 2 777889998876 56678887777 67777664322100000
Q ss_pred eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671 357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS 436 (573)
Q Consensus 357 s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~ 436 (573)
. ..
T Consensus 159 ------~----------------------------------------------------------------------~~- 161 (369)
T 3zwl_B 159 ------T----------------------------------------------------------------------KV- 161 (369)
T ss_dssp ------E----------------------------------------------------------------------EE-
T ss_pred ------c----------------------------------------------------------------------cc-
Confidence 0 00
Q ss_pred CCCeEEEEcCCCCccceeeeccccc--cEEEEEECCCCCEEEEeeCCCcEEEEeCCC-CeEEEeecCCcceEEEEEECCC
Q psy2671 437 DDFTLFLWNPEKEKKSLARMTGHQQ--LINCVEFSPDGRIIASASFDKSIKLWDGRI-GKFITTLRGHVQAVYMVAWSSD 513 (573)
Q Consensus 437 ~dg~i~lwd~~~~~~~~~~~~~h~~--~v~~v~~sp~g~~las~s~dg~i~lwd~~~-~~~~~~~~~h~~~v~~v~~s~d 513 (573)
. ......+..|.. .+.+++|+|++++|++++.||.|++||.++ ++.+..+..|...|.+++|+|+
T Consensus 162 --------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 229 (369)
T 3zwl_B 162 --------S----EEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPD 229 (369)
T ss_dssp --------C----SSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTT
T ss_pred --------c----cceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCC
Confidence 0 001112223333 799999999999999999999999999998 7888899999999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCC--------------cEEEcc
Q psy2671 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK--------------VLRLWQ 572 (573)
Q Consensus 514 g~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~--------------~i~iw~ 572 (573)
+++|++++.|+.|++||+++++....+. +...+.++.|+|+++++++++.++ .+++|+
T Consensus 230 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d 301 (369)
T 3zwl_B 230 LTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYH 301 (369)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEE
T ss_pred CCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEe
Confidence 9999999999999999999998887776 678899999999999999999998 788886
No 114
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=4.1e-32 Score=255.39 Aligned_cols=282 Identities=16% Similarity=0.152 Sum_probs=206.8
Q ss_pred EEEEEEcCCCC---eEEEEeCCCeEEEEECCCC---eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCce
Q psy2671 210 VISVKFSPNGR---SLASGSGDTTVRFWDVTTQ---TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283 (573)
Q Consensus 210 V~~~~fsp~g~---~las~s~d~~i~iwd~~~~---~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~ 283 (573)
+.++.|-..|- .+++++. .+|++|+..++ +.+++..+|+.+|..+.|.||..-|++..-.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~------------- 107 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALG------------- 107 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEEC-------------
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeec-------------
Confidence 44555544332 4667765 59999999998 8899999999999999999987655543211
Q ss_pred ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEe---CCC
Q psy2671 284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSAS---QDR 360 (573)
Q Consensus 284 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s---~d~ 360 (573)
.-+...|.++++.|... .-+..+++++.+ +++|++..+ .++..+ .|+
T Consensus 108 -----~~~~~~v~sla~spd~~-~~~~~l~s~g~~--~~v~~l~~g----------------------~lv~ss~~g~d~ 157 (356)
T 2w18_A 108 -----NLEIREIRALFCSSDDE-SEKQVLLKSGNI--KAVLGLTKR----------------------RLVSSSGTLSDQ 157 (356)
T ss_dssp -----SSSEEEEEEECC-------CCEEEEEEEEE--EEEEEETTT----------------------EEEEEESSSTTC
T ss_pred -----cccccceEEEEECCCcc-ccccEEEeCCCe--EEEEecCCC----------------------cEEEecccCCCC
Confidence 12345677777766311 115677877744 677765433 333333 588
Q ss_pred eEEEEeC-CCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671 361 TIKVWRA-SDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF 439 (573)
Q Consensus 361 ~i~vw~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 439 (573)
.|++|++ .+|+....+.+|...+..+++++- ..++..|++|+.|+
T Consensus 158 ~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~----------------------------------~g~~~~LaSgS~D~ 203 (356)
T 2w18_A 158 QVEVMTFAEDGGGKENQFLMPPEETILTFAEV----------------------------------QGMQEALLGTTIMN 203 (356)
T ss_dssp EEEEEEECTTSCEEEEEEECCCSSCEEEEEEE----------------------------------ETSTTEEEEEETTS
T ss_pred cEEEEEECCCCceeeeeccCCCceeeEEeecc----------------------------------CCCCceEEEecCCC
Confidence 8999998 457777888888888888877741 02478999999999
Q ss_pred eEEEEcCCCCccceeeecccc---ccEEEEEECCCCCEE------------EEeeCCCcEEEEeCCCCeEEEee-----c
Q psy2671 440 TLFLWNPEKEKKSLARMTGHQ---QLINCVEFSPDGRII------------ASASFDKSIKLWDGRIGKFITTL-----R 499 (573)
Q Consensus 440 ~i~lwd~~~~~~~~~~~~~h~---~~v~~v~~sp~g~~l------------as~s~dg~i~lwd~~~~~~~~~~-----~ 499 (573)
+|++||+.+++ .+..+.+|. ..+.+++|+|+|+++ ++|+.|++|++||..+++.+..+ .
T Consensus 204 TIkIWDl~TGk-~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~ 282 (356)
T 2w18_A 204 NIVIWNLKTGQ-LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPP 282 (356)
T ss_dssp EEEEEETTTCC-EEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCT
T ss_pred cEEEEECCCCc-EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccC
Confidence 99999998765 455565543 367788999999986 67889999999999999987765 4
Q ss_pred CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEE-EEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVY-AVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 500 ~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~-~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
+|...+.+..++ +.++|+++.|++|+|||+.+++++..+.+|.+.+. +++|||||++|+||+.|++||||+
T Consensus 283 Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 283 GQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp TCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred CCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 776665555444 88999999999999999999999999999988766 589999999999999999999997
No 115
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.5e-33 Score=282.21 Aligned_cols=289 Identities=16% Similarity=0.155 Sum_probs=189.0
Q ss_pred cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV 184 (573)
Q Consensus 105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (573)
....|...+....+++++++||+|+.|++|||||..++.+...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~------------------------------------- 126 (393)
T 4gq1_A 84 SENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQ------------------------------------- 126 (393)
T ss_dssp ECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEE-------------------------------------
T ss_pred cccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCcccee-------------------------------------
Confidence 3445666777777888899999999999999999987653211
Q ss_pred EeceeeEEEeeccccccCCCCCCCcEEEEEEcC--------CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEE
Q psy2671 185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP--------NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIA 256 (573)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp--------~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~ 256 (573)
.....+.||.+.|.+++|+| |+++||+||.|++|+|||+.++.++..+.+|...|.+++
T Consensus 127 -------------~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~ 193 (393)
T 4gq1_A 127 -------------HVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQ 193 (393)
T ss_dssp -------------EEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEE
T ss_pred -------------eeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEE
Confidence 11245789999999999998 889999999999999999999888888889999999999
Q ss_pred EcCCCC-eEEEEeeCCeEEEEECCCCceecccc---cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE
Q psy2671 257 WSPDSK-QLVSGCKNGVIHAWDSSTGKQIGQPM---RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332 (573)
Q Consensus 257 ~s~dg~-~l~sgs~dg~i~vwd~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 332 (573)
|+|++. +|++|+.|++|++||+.+++...... ..+..++......+ ....
T Consensus 194 ~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~--------------------------~~~~ 247 (393)
T 4gq1_A 194 FRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP--------------------------LVNT 247 (393)
T ss_dssp EETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG--------------------------GC--
T ss_pred ECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc--------------------------ceee
Confidence 999875 79999999999999999876542211 11111111111111 0111
Q ss_pred EEecCCCccEEEEEEC-CCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCC
Q psy2671 333 RVLTSHTRSVTCIRWG-GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPAN 410 (573)
Q Consensus 333 ~~~~~h~~~v~~~~~~-~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~ 410 (573)
....+|...+.++.|. +++ .+++++.|+++++||+..+.....+..|...+..+.+.++.
T Consensus 248 ~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~------------------ 309 (393)
T 4gq1_A 248 CHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNV------------------ 309 (393)
T ss_dssp ----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSE------------------
T ss_pred eecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccc------------------
Confidence 2234678888999885 444 79999999999999998877666665554444333322210
Q ss_pred chhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC--CCCEEEEeeCCCcEEEEe
Q psy2671 411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP--DGRIIASASFDKSIKLWD 488 (573)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp--~g~~las~s~dg~i~lwd 488 (573)
.....+...+. ..|+| ++.++++|+.||+|++||
T Consensus 310 -------------------------------------------~~~~~~~~~~~-~~~~~~~~~~~~~sgs~Dg~V~lwd 345 (393)
T 4gq1_A 310 -------------------------------------------QGISLFPSLLG-ACPHPRYMDYFATAHSQHGLIQLIN 345 (393)
T ss_dssp -------------------------------------------EEECSSCCSSC-CEECSSCTTEEEEEETTTTEEEEEE
T ss_pred -------------------------------------------ccccccCccee-EEEccCCCCEEEEEECCCCEEEEEE
Confidence 00111111122 23333 455778889999999999
Q ss_pred CCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532 (573)
Q Consensus 489 ~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~ 532 (573)
..+++.+..+.+|..+|.+++|||||++||+++.|| +.+|.+.
T Consensus 346 ~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 346 TYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp TTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred CCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 999988888888989999999999999999998765 6666653
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-33 Score=300.13 Aligned_cols=247 Identities=25% Similarity=0.423 Sum_probs=201.0
Q ss_pred CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECC--CCeeeEEecCCCCcEEEEEEcCC--CCeEEEEeeCCeEEEEE
Q psy2671 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT--TQTPLFKCEGHKHWVLCIAWSPD--SKQLVSGCKNGVIHAWD 277 (573)
Q Consensus 202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~--~~~~~~~~~~h~~~V~~v~~s~d--g~~l~sgs~dg~i~vwd 277 (573)
.+.||.+.|++++|+|+|++|++|+.||+|+|||+. ++..+..+.+|.+.|.+++|+|+ +++|++|+.||.|++||
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 467999999999999999999999999999999998 45667788999999999999988 89999999999999998
Q ss_pred CCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC--c-EEE
Q psy2671 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS--G-LIY 354 (573)
Q Consensus 278 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~--~-~l~ 354 (573)
+.+++.. ....+.+|...|.+++|+++ + .++
T Consensus 84 ~~~~~~~----------------------------------------------~~~~~~~h~~~V~~v~~sp~~~~~~l~ 117 (753)
T 3jro_A 84 EENGRWS----------------------------------------------QIAVHAVHSASVNSVQWAPHEYGPLLL 117 (753)
T ss_dssp EETTEEE----------------------------------------------EEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred CCCCccc----------------------------------------------ccccccCCCCCeEEEEECCCCCCCEEE
Confidence 7654310 12234456777778877764 3 566
Q ss_pred EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE
Q psy2671 355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS 434 (573)
Q Consensus 355 s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 434 (573)
+|+.|++|++||++++..
T Consensus 118 sgs~dg~I~vwdl~~~~~-------------------------------------------------------------- 135 (753)
T 3jro_A 118 VASSDGKVSVVEFKENGT-------------------------------------------------------------- 135 (753)
T ss_dssp EEETTSEEEEEECCSSSC--------------------------------------------------------------
T ss_pred EEeCCCcEEEEEeecCCC--------------------------------------------------------------
Confidence 666777777776553211
Q ss_pred EeCCCeEEEEcCCCCccceeeeccccccEEEEEECC-------------CCCEEEEeeCCCcEEEEeCCCC----eEEEe
Q psy2671 435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-------------DGRIIASASFDKSIKLWDGRIG----KFITT 497 (573)
Q Consensus 435 g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-------------~g~~las~s~dg~i~lwd~~~~----~~~~~ 497 (573)
.....+.+|...|.+++|+| ++.++++|+.||.|++||.+++ .....
T Consensus 136 ----------------~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~ 199 (753)
T 3jro_A 136 ----------------TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST 199 (753)
T ss_dssp ----------------CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred ----------------cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeee
Confidence 11223456778899999999 5899999999999999998876 56678
Q ss_pred ecCCcceEEEEEECCC---CCEEEEEeCCCcEEEEeCCccc-----ccccccCcCCCEEEEEEccCCCEEEEeeCCCcEE
Q psy2671 498 LRGHVQAVYMVAWSSD---SRLLVSGSADSTLKVWNMKTKK-----IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLR 569 (573)
Q Consensus 498 ~~~h~~~v~~v~~s~d---g~~las~s~D~~v~vwd~~~~~-----~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~ 569 (573)
+.+|...|++++|+|+ +++|++++.||.|++||+.+++ ......+|.+.|++++|+|++++|++++.||.|+
T Consensus 200 ~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~ 279 (753)
T 3jro_A 200 LEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVT 279 (753)
T ss_dssp ECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEE
T ss_pred ecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEE
Confidence 8899999999999999 8999999999999999998864 3444567889999999999999999999999999
Q ss_pred Ecc
Q psy2671 570 LWQ 572 (573)
Q Consensus 570 iw~ 572 (573)
+|+
T Consensus 280 vwd 282 (753)
T 3jro_A 280 LWK 282 (753)
T ss_dssp CCB
T ss_pred EEe
Confidence 997
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.3e-30 Score=264.84 Aligned_cols=300 Identities=12% Similarity=0.133 Sum_probs=238.1
Q ss_pred EeCCCeEEEEECC--CC--eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecc----cccCCcccEE
Q psy2671 225 GSGDTTVRFWDVT--TQ--TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ----PMRGHKQWIT 296 (573)
Q Consensus 225 ~s~d~~i~iwd~~--~~--~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~----~~~~h~~~v~ 296 (573)
++.++.++||.+. ++ +.+..+..+. .+.+++|+|++..+++++.++.|++||+.+++.... .+.+|...|.
T Consensus 95 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~ 173 (433)
T 3bws_A 95 KPEELNEKLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVE 173 (433)
T ss_dssp SGGGGTTCEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEE
T ss_pred ccCCCceEEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCcee
Confidence 3445544555543 34 4455555554 456999999777888888899999999998876532 3457888999
Q ss_pred EEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EE-EEEeCCCeEEEEeCCCCeeeE
Q psy2671 297 ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LI-YSASQDRTIKVWRASDGVMCR 374 (573)
Q Consensus 297 ~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l-~s~s~d~~i~vw~~~~~~~~~ 374 (573)
++.|.| +++.+++++.|+.|++||+.+++....+..|...+.+++|++++ .+ ++++.|+.|++||++++....
T Consensus 174 ~~~~~~-----~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 174 TISIPE-----HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEEEGG-----GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEcC-----CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 999865 56789999999999999999999988888999999999999876 45 455589999999999988877
Q ss_pred eccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe--------CCCeEEEEcC
Q psy2671 375 TLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS--------DDFTLFLWNP 446 (573)
Q Consensus 375 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~--------~dg~i~lwd~ 446 (573)
.+..+.. +..++++ |++..+++++ .|+.|++||+
T Consensus 249 ~~~~~~~-~~~~~~~-------------------------------------~~g~~l~~~~~~~~~~~~~dg~i~~~d~ 290 (433)
T 3bws_A 249 KTDKIGL-PRGLLLS-------------------------------------KDGKELYIAQFSASNQESGGGRLGIYSM 290 (433)
T ss_dssp ECCCCSE-EEEEEEC-------------------------------------TTSSEEEEEEEESCTTCSCCEEEEEEET
T ss_pred EecCCCC-ceEEEEc-------------------------------------CCCCEEEEEECCCCccccCCCeEEEEEC
Confidence 7665432 4445444 5577777777 5899999999
Q ss_pred CCCccceeeeccccccEEEEEECCCCCE-EEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeC---
Q psy2671 447 EKEKKSLARMTGHQQLINCVEFSPDGRI-IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA--- 522 (573)
Q Consensus 447 ~~~~~~~~~~~~h~~~v~~v~~sp~g~~-las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~--- 522 (573)
.+.+. .....|...+.+++|+|+++. +++++.|+.|++||..+++.+..+. +...+.+++|+|+|++|++++.
T Consensus 291 ~~~~~--~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~ 367 (433)
T 3bws_A 291 DKEKL--IDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPN 367 (433)
T ss_dssp TTTEE--EEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCC
T ss_pred CCCcE--EeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCC
Confidence 86543 223355667899999999975 5667899999999999998887776 5577899999999999988876
Q ss_pred ------------CCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeC-CCcEEEcc
Q psy2671 523 ------------DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK-DKVLRLWQ 572 (573)
Q Consensus 523 ------------D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~-d~~i~iw~ 572 (573)
||.|++||+.+++.+..+.+ ...+.+++|+||+++|++++. |+.|++|+
T Consensus 368 ~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~ 429 (433)
T 3bws_A 368 HPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYR 429 (433)
T ss_dssp CTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred ccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEE
Confidence 57999999999988877776 457999999999999998875 99999996
No 118
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=6.7e-32 Score=266.29 Aligned_cols=279 Identities=13% Similarity=0.144 Sum_probs=210.7
Q ss_pred CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeE-EEEeeCCeEEEEECCC
Q psy2671 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL-VSGCKNGVIHAWDSST 280 (573)
Q Consensus 202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l-~sgs~dg~i~vwd~~~ 280 (573)
+..+|.+.|.+++|+|||++||+|+.| .++|||+.+++.......+ .+..+++.++++.+ ++++.|++|++||..+
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence 456899999999999999999998876 4789999887766554332 47788899988877 5688889999999999
Q ss_pred CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC-eEEEEecCCCccEEEEEECCCcEEEE--Ee
Q psy2671 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCIRWGGSGLIYS--AS 357 (573)
Q Consensus 281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~l~s--~s 357 (573)
++.+... .+...|.++.+.+. .++.+ .|+.|++||+... +.+..+.. ....+++++ ..++. |+
T Consensus 91 ~~~~~~~--~~~~~v~~v~~~~~-------~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~-~~la~~sg~ 156 (355)
T 3vu4_A 91 KQDVSRI--KVDAPVKDLFLSRE-------FIVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN-GLLVYSNEF 156 (355)
T ss_dssp TEEEEEE--ECSSCEEEEEECSS-------EEEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET-TEEEEEESS
T ss_pred CcEEEEE--ECCCceEEEEEcCC-------EEEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc-cEEEEeCCC
Confidence 8876432 35668999988652 34443 4789999999887 55554443 333344455 44444 68
Q ss_pred CCCeEEEEeCCCCe----------------eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671 358 QDRTIKVWRASDGV----------------MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421 (573)
Q Consensus 358 ~d~~i~vw~~~~~~----------------~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (573)
.||.|++||+.++. ....+.+|...|.+++++
T Consensus 157 ~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s-------------------------------- 204 (355)
T 3vu4_A 157 NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN-------------------------------- 204 (355)
T ss_dssp CTTCEEEEECCC------------------CCEEECCCSSCEEEEEEC--------------------------------
T ss_pred cCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEEC--------------------------------
Confidence 99999999998765 267788999999888877
Q ss_pred eeeeCCCCcEEEEEeCCCe-EEEEcCCCCccceeeec-c-ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE--EE
Q psy2671 422 YQAQCPEGEKLVSGSDDFT-LFLWNPEKEKKSLARMT-G-HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF--IT 496 (573)
Q Consensus 422 ~~~~~~~~~~l~sg~~dg~-i~lwd~~~~~~~~~~~~-~-h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~--~~ 496 (573)
|++.+|++|+.|++ |++||++++.. +..+. + |...|.+++|+|+|++|++++.|++|++||++.+.. ..
T Consensus 205 -----~~g~~l~s~s~d~~~v~iwd~~~~~~-~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~ 278 (355)
T 3vu4_A 205 -----RKSDMVATCSQDGTIIRVFKTEDGVL-VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRH 278 (355)
T ss_dssp -----TTSSEEEEEETTCSEEEEEETTTCCE-EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSE
T ss_pred -----CCCCEEEEEeCCCCEEEEEECCCCcE-EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccc
Confidence 55889999999998 99999987654 44555 5 999999999999999999999999999999876431 11
Q ss_pred eecC---------------------CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc
Q psy2671 497 TLRG---------------------HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535 (573)
Q Consensus 497 ~~~~---------------------h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~ 535 (573)
.+.+ +......++|++||++|++++.||.+++|++..++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 279 ALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp ETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred cccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 1111 11223568999999999999999999999986543
No 119
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=7.6e-32 Score=253.58 Aligned_cols=257 Identities=15% Similarity=0.131 Sum_probs=185.2
Q ss_pred cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCC----CCeEEEEeeCCeEEEE
Q psy2671 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD----SKQLVSGCKNGVIHAW 276 (573)
Q Consensus 201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~d----g~~l~sgs~dg~i~vw 276 (573)
+++.+|..+|..+.|.||...|++.... .-+...|++++|+|| ++.+++++.+ +++|
T Consensus 80 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----------------~~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~ 140 (356)
T 2w18_A 80 YTWHFAEVPVLQIVPVPDVYNLVCVALG-----------------NLEIREIRALFCSSDDESEKQVLLKSGNI--KAVL 140 (356)
T ss_dssp EEEECCSSCEEEECCCTTCCSCEEEEEC-----------------SSSEEEEEEECC------CCEEEEEEEEE--EEEE
T ss_pred EEEeccCceeEEEEEcCcccceeeeeec-----------------cccccceEEEEECCCccccccEEEeCCCe--EEEE
Confidence 4456899999999999997766543221 123456899999999 9999998854 7888
Q ss_pred ECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEe--CCCcEEEEEC-CCCeEEEEecCCCccEEEEEECC---C
Q psy2671 277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG--KDGAIRIWDV-ILSQCVRVLTSHTRSVTCIRWGG---S 350 (573)
Q Consensus 277 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~--~dg~v~iwd~-~~~~~~~~~~~h~~~v~~~~~~~---~ 350 (573)
++.+++ .+.+++ .|+.|++|++ ..++.+..+.+|...+..++|++ +
T Consensus 141 ~l~~g~----------------------------lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~ 192 (356)
T 2w18_A 141 GLTKRR----------------------------LVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGM 192 (356)
T ss_dssp EETTTE----------------------------EEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETS
T ss_pred ecCCCc----------------------------EEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCC
Confidence 764332 233322 5899999999 55778888888998888888876 3
Q ss_pred c-EEEEEeCCCeEEEEeCCCCeeeEeccCCcc---eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeC
Q psy2671 351 G-LIYSASQDRTIKVWRASDGVMCRTLEGHAH---WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC 426 (573)
Q Consensus 351 ~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (573)
+ .+++++.|++|++||+++|+.++++.+|.. .+..++++++....+.....
T Consensus 193 ~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~------------------------- 247 (356)
T 2w18_A 193 QEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHP------------------------- 247 (356)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC---------------------------
T ss_pred CceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccC-------------------------
Confidence 3 799999999999999999999999987543 45666788876544332210
Q ss_pred CCCcEEEEEeCCCeEEEEcCCCCccceee----eccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc
Q psy2671 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLAR----MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV 502 (573)
Q Consensus 427 ~~~~~l~sg~~dg~i~lwd~~~~~~~~~~----~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~ 502 (573)
.....+++|+.|+++++||+.+++..... ..+|...+.+..++ +.++|+|+.|++|+|||+.+++++.++.+|.
T Consensus 248 ~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~ 325 (356)
T 2w18_A 248 CAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVS 325 (356)
T ss_dssp ----------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC-
T ss_pred CCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCC
Confidence 01235789999999999999876532111 14666554444443 7899999999999999999999999999998
Q ss_pred ceEE-EEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671 503 QAVY-MVAWSSDSRLLVSGSADSTLKVWNM 531 (573)
Q Consensus 503 ~~v~-~v~~s~dg~~las~s~D~~v~vwd~ 531 (573)
..+. +++|||||++||+|+.|++|||||+
T Consensus 326 ~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 326 DQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 7665 5899999999999999999999985
No 120
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.1e-32 Score=276.22 Aligned_cols=249 Identities=22% Similarity=0.461 Sum_probs=205.4
Q ss_pred CCCCCcEEEEEEcCC-CCeEEEEeCCCeEEEEECCC----------CeeeEEecCCCCcEEEEEEcCCCC-eEEEEeeCC
Q psy2671 204 PGHAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTT----------QTPLFKCEGHKHWVLCIAWSPDSK-QLVSGCKNG 271 (573)
Q Consensus 204 ~gh~~~V~~~~fsp~-g~~las~s~d~~i~iwd~~~----------~~~~~~~~~h~~~V~~v~~s~dg~-~l~sgs~dg 271 (573)
.+|.+.|++++|+|+ +.+||+++.||.|++||+.+ ..++..+.+|...|.+++|+|++. +|++|+.||
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 468999999999997 77999999999999999976 567788899999999999999998 999999999
Q ss_pred eEEEEECCCCcee------cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC---eEEEEecCCCccE
Q psy2671 272 VIHAWDSSTGKQI------GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS---QCVRVLTSHTRSV 342 (573)
Q Consensus 272 ~i~vwd~~~~~~~------~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~h~~~v 342 (573)
.|++|++..+... ...+.+|...|.+++|.|. .+..|++++.||.|++||+... .....+..|...|
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~----~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLL----HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSS----CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCC----CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 9999999874321 2345689999999999873 3568999999999999999876 4556667788888
Q ss_pred EEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671 343 TCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA 420 (573)
Q Consensus 343 ~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (573)
.+++|++++ .+++|+.|++|++||+
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~----------------------------------------------------- 307 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDL----------------------------------------------------- 307 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEET-----------------------------------------------------
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeC-----------------------------------------------------
Confidence 888877643 3445555555555554
Q ss_pred heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEEeeCCCcEEEEeCCC--------
Q psy2671 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRI-------- 491 (573)
Q Consensus 421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las~s~dg~i~lwd~~~-------- 491 (573)
+.....+..+.+|...|.+++|+|+++ +|++++.||.|++||+..
T Consensus 308 --------------------------~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 361 (430)
T 2xyi_A 308 --------------------------RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 361 (430)
T ss_dssp --------------------------TCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHH
T ss_pred --------------------------CCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcc
Confidence 433334555667888999999999985 799999999999999876
Q ss_pred ------CeEEEeecCCcceEEEEEECCCCC-EEEEEeCCCcEEEEeCCccc
Q psy2671 492 ------GKFITTLRGHVQAVYMVAWSSDSR-LLVSGSADSTLKVWNMKTKK 535 (573)
Q Consensus 492 ------~~~~~~~~~h~~~v~~v~~s~dg~-~las~s~D~~v~vwd~~~~~ 535 (573)
.+.+..+.+|...|++++|+|+++ +|++++.|+.|++|++....
T Consensus 362 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 362 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp HHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred ccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 367788889999999999999999 89999999999999997643
No 121
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.1e-31 Score=272.14 Aligned_cols=246 Identities=23% Similarity=0.431 Sum_probs=210.4
Q ss_pred cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC----------CeEEEEecCCCccEEEEEECCCc--EEE
Q psy2671 287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL----------SQCVRVLTSHTRSVTCIRWGGSG--LIY 354 (573)
Q Consensus 287 ~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~--~l~ 354 (573)
...+|...|.+++|.|. .+.++++++.||.|++|++.. ..+...+.+|...|.+++|++++ .++
T Consensus 123 ~~~~h~~~v~~l~~~p~----~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 198 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQ----NACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLL 198 (430)
T ss_dssp EEEEESSCCSEEEEETT----EEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEE
T ss_pred EEEcCCCcEEEEEECCC----CCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEE
Confidence 34578889999999873 246899999999999999976 56677888999999999998764 799
Q ss_pred EEeCCCeEEEEeCCCCee-------eEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC
Q psy2671 355 SASQDRTIKVWRASDGVM-------CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP 427 (573)
Q Consensus 355 s~s~d~~i~vw~~~~~~~-------~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (573)
+|+.||+|++|++..+.. ...+.+|...|..++++++
T Consensus 199 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~------------------------------------ 242 (430)
T 2xyi_A 199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLL------------------------------------ 242 (430)
T ss_dssp EECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSS------------------------------------
T ss_pred EEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCC------------------------------------
Confidence 999999999999987422 3456678888888777642
Q ss_pred CCcEEEEEeCCCeEEEEcCCCCc--cceeeeccccccEEEEEECCCCC-EEEEeeCCCcEEEEeCCC-CeEEEeecCCcc
Q psy2671 428 EGEKLVSGSDDFTLFLWNPEKEK--KSLARMTGHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRI-GKFITTLRGHVQ 503 (573)
Q Consensus 428 ~~~~l~sg~~dg~i~lwd~~~~~--~~~~~~~~h~~~v~~v~~sp~g~-~las~s~dg~i~lwd~~~-~~~~~~~~~h~~ 503 (573)
++.++++++.|+.|++||++... .....+..|...|++++|+|++. ++++|+.||.|++||.++ ...+..+.+|..
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~ 322 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD 322 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSS
T ss_pred CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCC
Confidence 36789999999999999998763 45566778999999999999987 799999999999999998 566788889999
Q ss_pred eEEEEEECCCCC-EEEEEeCCCcEEEEeCCc--------------ccccccccCcCCCEEEEEEccCCC-EEEEeeCCCc
Q psy2671 504 AVYMVAWSSDSR-LLVSGSADSTLKVWNMKT--------------KKIEQDLPGHGDEVYAVDWAPDGE-KVASGGKDKV 567 (573)
Q Consensus 504 ~v~~v~~s~dg~-~las~s~D~~v~vwd~~~--------------~~~~~~l~~h~~~v~~~~~s~d~~-~l~s~~~d~~ 567 (573)
.|++++|+|+++ +|++++.|+.|++||+.. .+.+..+.+|.+.|++++|+|+++ .|++++.|+.
T Consensus 323 ~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~ 402 (430)
T 2xyi_A 323 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNI 402 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSE
T ss_pred CEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCC
Confidence 999999999995 699999999999999977 245567788999999999999999 8999999999
Q ss_pred EEEcc
Q psy2671 568 LRLWQ 572 (573)
Q Consensus 568 i~iw~ 572 (573)
|++|+
T Consensus 403 i~iw~ 407 (430)
T 2xyi_A 403 MQVWQ 407 (430)
T ss_dssp EEEEE
T ss_pred EEEeE
Confidence 99996
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=8.1e-30 Score=255.27 Aligned_cols=329 Identities=15% Similarity=0.190 Sum_probs=246.9
Q ss_pred CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeeccccccC
Q psy2671 123 RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS 202 (573)
Q Consensus 123 ~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (573)
.++++++.|++|++||+.+++++..
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~------------------------------------------------------- 27 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTAT------------------------------------------------------- 27 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEE-------------------------------------------------------
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEE-------------------------------------------------------
Confidence 4688999999999999988754321
Q ss_pred CCCCCCcEEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEE-EeeCCeEEEEECCC
Q psy2671 203 MPGHAEAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVS-GCKNGVIHAWDSST 280 (573)
Q Consensus 203 ~~gh~~~V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~s-gs~dg~i~vwd~~~ 280 (573)
+.+| ..+.+++|+|+|+++ ++++.|++|++||+.+++.+..+..+. .+.+++|+|++++|+. ++.++.|++||+.+
T Consensus 28 ~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~ 105 (391)
T 1l0q_A 28 IPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTS 105 (391)
T ss_dssp EECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred eecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCC
Confidence 1234 348999999999987 677799999999999999888777665 8999999999998865 45679999999998
Q ss_pred CceecccccCCcccEEEEEecccccCCCCCEE-EEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EE-EEEe
Q psy2671 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRF-ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LI-YSAS 357 (573)
Q Consensus 281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l-~s~s 357 (573)
++.+.. +.. ...+.+++|.| +++.+ ++++.++.|++||+.+++....+..|. .+.+++|++++ .+ ++++
T Consensus 106 ~~~~~~-~~~-~~~~~~~~~s~-----dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~ 177 (391)
T 1l0q_A 106 NTVAGT-VKT-GKSPLGLALSP-----DGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANF 177 (391)
T ss_dssp TEEEEE-EEC-SSSEEEEEECT-----TSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEET
T ss_pred CeEEEE-EeC-CCCcceEEECC-----CCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeC
Confidence 876533 233 34578888876 45656 788889999999999999888877664 46899999887 44 6778
Q ss_pred CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe-
Q psy2671 358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS- 436 (573)
Q Consensus 358 ~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~- 436 (573)
.++.|++||++++.....+..+ ..+..++++ |++.++++++
T Consensus 178 ~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~-------------------------------------~~g~~l~~~~~ 219 (391)
T 1l0q_A 178 DSMSISVIDTVTNSVIDTVKVE-AAPSGIAVN-------------------------------------PEGTKAYVTNV 219 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECS-SEEEEEEEC-------------------------------------TTSSEEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEecC-CCccceEEC-------------------------------------CCCCEEEEEec
Confidence 8999999999988776655432 334444443 5677788777
Q ss_pred --CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEE-EEeeCCCcEEEEeCCCCeEEEeecCCcceEE---EEEE
Q psy2671 437 --DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII-ASASFDKSIKLWDGRIGKFITTLRGHVQAVY---MVAW 510 (573)
Q Consensus 437 --~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l-as~s~dg~i~lwd~~~~~~~~~~~~h~~~v~---~v~~ 510 (573)
.++.|++||+.+.. .+..+..|. .+.+++|+|+|++| ++++.|+.|++||..+++.+..+..|..+.. .+.+
T Consensus 220 ~~~~~~v~~~d~~~~~-~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (391)
T 1l0q_A 220 DKYFNTVSMIDTGTNK-ITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGS 297 (391)
T ss_dssp CSSCCEEEEEETTTTE-EEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEE
T ss_pred CcCCCcEEEEECCCCe-EEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeec
Confidence 68999999998754 344555554 47899999999977 6778899999999999998888876654421 1222
Q ss_pred CC------------CC----------CEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEe
Q psy2671 511 SS------------DS----------RLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASG 562 (573)
Q Consensus 511 s~------------dg----------~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~ 562 (573)
.| +. ..+...+.|.++++|++..+... .+..+ ...|+++|.|.++.
T Consensus 298 ~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~~----~~~~~--~~~~~~~g~y~~~~ 365 (391)
T 1l0q_A 298 IPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSS----KKQNP--THTYSETGIYTVRL 365 (391)
T ss_dssp CSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCEE----CSSSC--EECCSSCEEEEEEE
T ss_pred ccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCccc----CcCCC--eEEeCCCceEEEEE
Confidence 22 11 24566677889999999876542 22233 35789998887643
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=3.4e-30 Score=261.71 Aligned_cols=277 Identities=16% Similarity=0.142 Sum_probs=223.1
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeE-----EecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCce
Q psy2671 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF-----KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283 (573)
Q Consensus 209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~-----~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~ 283 (573)
.+.+++|+|++.++++++.|++|++||+.+++.+. .+.+|...|.+++|+|+++.+++++.|+.|++||+++++.
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~ 203 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAY 203 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCE
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceE
Confidence 45589999987788888889999999999988776 3458999999999999999999999999999999998876
Q ss_pred ecccccCCcccEEEEEecccccCCCCCEE-EEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEe----
Q psy2671 284 IGQPMRGHKQWITALSWEPFHLNHQCRRF-ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSAS---- 357 (573)
Q Consensus 284 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s---- 357 (573)
+. .+..|...+.+++|.| +++.+ ++++.|+.|++||+.+++.+..+..+ ..+.+++|++++ .+++++
T Consensus 204 ~~-~~~~~~~~~~~~~~~~-----~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~ 276 (433)
T 3bws_A 204 KA-TVDLTGKWSKILLYDP-----IRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSAS 276 (433)
T ss_dssp EE-EEECSSSSEEEEEEET-----TTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESC
T ss_pred EE-EEcCCCCCeeEEEEcC-----CCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCC
Confidence 53 3457888899999876 45556 55568999999999999888877665 458999999887 677777
Q ss_pred ----CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc-EE
Q psy2671 358 ----QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE-KL 432 (573)
Q Consensus 358 ----~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l 432 (573)
.|+.|++||+.++.....+ .|...+..++++ |+++ .+
T Consensus 277 ~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~-------------------------------------~~g~~l~ 318 (433)
T 3bws_A 277 NQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSG-------------------------------------NTENKIY 318 (433)
T ss_dssp TTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEEC-------------------------------------SSTTEEE
T ss_pred ccccCCCeEEEEECCCCcEEeec-cCCCCcceEEEC-------------------------------------CCCCEEE
Confidence 5889999999988765543 222333444433 5565 55
Q ss_pred EEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC---------------CCcEEEEeCCCCeEEEe
Q psy2671 433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF---------------DKSIKLWDGRIGKFITT 497 (573)
Q Consensus 433 ~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~---------------dg~i~lwd~~~~~~~~~ 497 (573)
++++.|+.+++||+.+... ...+ .+...+.+++|+|+|+++++++. ||.|++||..+++.+..
T Consensus 319 ~~~~~~~~v~v~d~~~~~~-~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 319 VSDMCCSKIEVYDLKEKKV-QKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp EEETTTTEEEEEETTTTEE-EEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred EEecCCCEEEEEECCCCcE-EEEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 7778999999999986543 3333 35677999999999999888876 57999999999998888
Q ss_pred ecCCcceEEEEEECCCCCEEEEEeC-CCcEEEEeCCc
Q psy2671 498 LRGHVQAVYMVAWSSDSRLLVSGSA-DSTLKVWNMKT 533 (573)
Q Consensus 498 ~~~h~~~v~~v~~s~dg~~las~s~-D~~v~vwd~~~ 533 (573)
+..+ ..+.+++|+|||++|++++. |+.|++|+++.
T Consensus 397 ~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 397 WEAG-NQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EECS-SSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred ecCC-CCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 8764 57899999999999988875 99999999863
No 124
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-32 Score=264.61 Aligned_cols=268 Identities=9% Similarity=0.014 Sum_probs=202.6
Q ss_pred EEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeec
Q psy2671 117 KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPV 196 (573)
Q Consensus 117 ~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (573)
.+.+++++||||+.||+|++||+.+++++....
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----------------------------------------------- 75 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT----------------------------------------------- 75 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-----------------------------------------------
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-----------------------------------------------
Confidence 445688999999999999999999886543211
Q ss_pred cccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECC---------CCeeeEEe-cCCCCcEEEEEEcC--CCCeE
Q psy2671 197 TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT---------TQTPLFKC-EGHKHWVLCIAWSP--DSKQL 264 (573)
Q Consensus 197 ~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~---------~~~~~~~~-~~h~~~V~~v~~s~--dg~~l 264 (573)
...|.++.|+|+ +++++.|++|++|+.. +++.+... .+|...|.+++|+| ++++|
T Consensus 76 ----------~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 142 (343)
T 3lrv_A 76 ----------TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYF 142 (343)
T ss_dssp ----------EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEE
T ss_pred ----------cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEE
Confidence 123455667777 8999999999999765 44434333 36778999999999 99999
Q ss_pred EEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE-EEecC-CCccE
Q psy2671 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV-RVLTS-HTRSV 342 (573)
Q Consensus 265 ~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~-h~~~v 342 (573)
++|+.||+|++||+++++........|...+.+++|.| ++.++++|+.||.|++||+.+++.. ..+.. |...|
T Consensus 143 ~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p-----dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v 217 (343)
T 3lrv_A 143 IWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK-----DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKI 217 (343)
T ss_dssp EEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT-----TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCE
T ss_pred EEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC-----CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCE
Confidence 99999999999999998875433345666799999876 5789999999999999999998877 67777 99999
Q ss_pred EEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671 343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421 (573)
Q Consensus 343 ~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (573)
.+++|++++ .+++++ |++|++||++++.....+..+
T Consensus 218 ~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~------------------------------------------ 254 (343)
T 3lrv_A 218 KEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTY------------------------------------------ 254 (343)
T ss_dssp EEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCC------------------------------------------
T ss_pred EEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeeccc------------------------------------------
Confidence 999999877 567777 458888888765432222110
Q ss_pred eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccE--EEEEECCCCCEEEEeeC-CCcEEEEeCCCCeEEEee
Q psy2671 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI--NCVEFSPDGRIIASASF-DKSIKLWDGRIGKFITTL 498 (573)
Q Consensus 422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v--~~v~~sp~g~~las~s~-dg~i~lwd~~~~~~~~~~ 498 (573)
..|...+ .+++|+|+|++|++++. |+.|++|+..........
T Consensus 255 -----------------------------------~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 255 -----------------------------------TIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp -----------------------------------BC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE
T ss_pred -----------------------------------ccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe
Confidence 0011111 57999999999999998 999999998655432222
Q ss_pred cCCcceEEEEEECC---CCCEEEEEeCCCcEEEEeC
Q psy2671 499 RGHVQAVYMVAWSS---DSRLLVSGSADSTLKVWNM 531 (573)
Q Consensus 499 ~~h~~~v~~v~~s~---dg~~las~s~D~~v~vwd~ 531 (573)
.++..++|++ +.+.+++++.|+.++++-.
T Consensus 300 ----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 300 ----DEESALCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp ----EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred ----cCceeEecCccccccceeEEEecCCceEEEEe
Confidence 5677889998 8999999999999998753
No 125
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=1.6e-30 Score=292.41 Aligned_cols=360 Identities=13% Similarity=0.115 Sum_probs=262.6
Q ss_pred ccCCCccccEEEEEEcCCCCeeEEeeCC------CcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCc
Q psy2671 104 SSMPGHAEAVISVKFSPNGRSLASGSGD------TTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNT 177 (573)
Q Consensus 104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D------~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (573)
..+.+|...|.+++|||||++||+++.+ ..|.+||+.++...
T Consensus 46 ~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~-------------------------------- 93 (1045)
T 1k32_A 46 RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIK-------------------------------- 93 (1045)
T ss_dssp EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEE--------------------------------
T ss_pred EEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeE--------------------------------
Confidence 3456799999999999999999988653 47999998876421
Q ss_pred cceEEEEEeceeeEEEeeccccccCCCCCCCcE-------EEEEEcCCCCeEEEEeCC------CeEEEEECCCCe----
Q psy2671 178 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAV-------ISVKFSPNGRSLASGSGD------TTVRFWDVTTQT---- 240 (573)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V-------~~~~fsp~g~~las~s~d------~~i~iwd~~~~~---- 240 (573)
.+.+|...+ .+++|||||+.+++++.+ ..|.+|++.++.
T Consensus 94 ------------------------~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l 149 (1045)
T 1k32_A 94 ------------------------RITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL 149 (1045)
T ss_dssp ------------------------ECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC
T ss_pred ------------------------EcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEe
Confidence 122344444 566666666644555433 235555543332
Q ss_pred ---------------------------------------------eeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEE
Q psy2671 241 ---------------------------------------------PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA 275 (573)
Q Consensus 241 ---------------------------------------------~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~v 275 (573)
....+.+|...+.++.|+++ ..+++++.|+.+.+
T Consensus 150 ~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l 228 (1045)
T 1k32_A 150 NLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQI 228 (1045)
T ss_dssp CSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEE
T ss_pred cCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEE
Confidence 12233567888899999988 56677788899999
Q ss_pred EECCC-CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC-----------CCccEE
Q psy2671 276 WDSST-GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS-----------HTRSVT 343 (573)
Q Consensus 276 wd~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-----------h~~~v~ 343 (573)
|.+.. +... ..+..|.. +....|+| +++.++.+ .++.|++|++.... +..+.. |...+.
T Consensus 229 ~~~~~~g~~~-~~l~~~~~-~~~~~~Sp-----DG~~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~ 299 (1045)
T 1k32_A 229 YSTDLDGKDL-RKHTSFTD-YYPRHLNT-----DGRRILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKF 299 (1045)
T ss_dssp EEEETTSCSC-EECCCCCS-SCEEEEEE-----SSSCEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGG
T ss_pred EEEeCCCCcc-eEecCCCC-cceeeEcC-----CCCEEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccc
Confidence 97653 2222 23334442 34456655 67778776 58999999985443 335444 344688
Q ss_pred EEEEC-CCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcc-eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671 344 CIRWG-GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAH-WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA 420 (573)
Q Consensus 344 ~~~~~-~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (573)
+++|+ +++ .+++++ ++.+.+|+...+.... +..|.. .+..++++
T Consensus 300 ~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s------------------------------- 346 (1045)
T 1k32_A 300 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD------------------------------- 346 (1045)
T ss_dssp EEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-------------------------------
T ss_pred eeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-------------------------------
Confidence 99999 988 466665 8899999988775433 444444 44444433
Q ss_pred heeeeCCCCcEEEEEeCCCeEE-EEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671 421 KYQAQCPEGEKLVSGSDDFTLF-LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR 499 (573)
Q Consensus 421 ~~~~~~~~~~~l~sg~~dg~i~-lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~ 499 (573)
+|+.++.++.++.+. +|+..... ...+.+|...+..++|||||++||+++.++.|++||+.+++....+.
T Consensus 347 -------dg~~l~~~s~~~~l~~~~d~~~~~--~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~ 417 (1045)
T 1k32_A 347 -------TKVAFIHGTREGDFLGIYDYRTGK--AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER 417 (1045)
T ss_dssp -------SEEEEEEEETTEEEEEEEETTTCC--EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred -------CCCeEEEEECCCceEEEEECCCCC--ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc
Confidence 366788888888888 99987643 23344777889999999999999999999999999999998887777
Q ss_pred CCcceEEEEEECCCCCEEEEEeCCC----------cEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEE
Q psy2671 500 GHVQAVYMVAWSSDSRLLVSGSADS----------TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLR 569 (573)
Q Consensus 500 ~h~~~v~~v~~s~dg~~las~s~D~----------~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~ 569 (573)
+|...+..++|||||++||+++.++ .|++||+.+++ ...+..|...+.++.|+|||++|++++.++..+
T Consensus 418 ~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~ 496 (1045)
T 1k32_A 418 SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDP 496 (1045)
T ss_dssp CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCC
T ss_pred CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCc
Confidence 8888899999999999999887654 89999999887 567778888899999999999999999887766
Q ss_pred Ecc
Q psy2671 570 LWQ 572 (573)
Q Consensus 570 iw~ 572 (573)
+|+
T Consensus 497 ~~~ 499 (1045)
T 1k32_A 497 SPD 499 (1045)
T ss_dssp EEC
T ss_pred Ccc
Confidence 664
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.3e-29 Score=253.84 Aligned_cols=302 Identities=14% Similarity=0.191 Sum_probs=235.4
Q ss_pred eEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeE-EEEeeCCeEEEEECCCCceecccccCCcccEEEEE
Q psy2671 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL-VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALS 299 (573)
Q Consensus 221 ~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l-~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~ 299 (573)
.+++++.|++|++||+.+++.+..+.+|.. +.+++|+|+|++| ++++.|+.|++||+.+++.+.. +..+. .+.+++
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~-~~~~~-~v~~~~ 80 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIAT-VPAGS-SPQGVA 80 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEE-EECSS-SEEEEE
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEE-EECCC-CccceE
Confidence 578899999999999999998888887764 8999999999987 6777999999999998876543 33333 789999
Q ss_pred ecccccCCCCCEE-EEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EE-EEEeCCCeEEEEeCCCCeeeEec
Q psy2671 300 WEPFHLNHQCRRF-ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LI-YSASQDRTIKVWRASDGVMCRTL 376 (573)
Q Consensus 300 ~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l-~s~s~d~~i~vw~~~~~~~~~~~ 376 (573)
|.| +++++ ++++.++.|++||+.+++....+..|. .+.+++|++++ .+ ++++.|+.|++||+.++.....+
T Consensus 81 ~sp-----dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 154 (391)
T 1l0q_A 81 VSP-----DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV 154 (391)
T ss_dssp ECT-----TSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ECC-----CCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 876 45666 455577999999999998888776554 67999999887 34 68888999999999998877766
Q ss_pred cCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE-EEEeCCCeEEEEcCCCCccceee
Q psy2671 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL-VSGSDDFTLFLWNPEKEKKSLAR 455 (573)
Q Consensus 377 ~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~sg~~dg~i~lwd~~~~~~~~~~ 455 (573)
..+.. +..++++ |++..+ ++++.++.|++||+++... ...
T Consensus 155 ~~~~~-~~~~~~~-------------------------------------~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~ 195 (391)
T 1l0q_A 155 SVGRS-PKGIAVT-------------------------------------PDGTKVYVANFDSMSISVIDTVTNSV-IDT 195 (391)
T ss_dssp ECCSS-EEEEEEC-------------------------------------TTSSEEEEEETTTTEEEEEETTTTEE-EEE
T ss_pred ecCCC-cceEEEC-------------------------------------CCCCEEEEEeCCCCEEEEEECCCCeE-EEE
Confidence 65432 3444443 556666 6778899999999987542 223
Q ss_pred eccccccEEEEEECCCCCEEEEee---CCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEE-EEEeCCCcEEEEeC
Q psy2671 456 MTGHQQLINCVEFSPDGRIIASAS---FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLL-VSGSADSTLKVWNM 531 (573)
Q Consensus 456 ~~~h~~~v~~v~~sp~g~~las~s---~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~l-as~s~D~~v~vwd~ 531 (573)
+ .+...+.+++|+|+|++|++++ .++.|++||.++++.+..+..|. .+.+++|+|+|++| ++++.|+.|++||+
T Consensus 196 ~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 196 V-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp E-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred E-ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 3 3456789999999999999888 68999999999999888888775 47899999999987 67788999999999
Q ss_pred CcccccccccCcCCCEE---------------EEEEccCC----------CEEEEeeCCCcEEEcc
Q psy2671 532 KTKKIEQDLPGHGDEVY---------------AVDWAPDG----------EKVASGGKDKVLRLWQ 572 (573)
Q Consensus 532 ~~~~~~~~l~~h~~~v~---------------~~~~s~d~----------~~l~s~~~d~~i~iw~ 572 (573)
.+++.+..+..|..+.. ...|+.+. ..+...+.|.++++|+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 339 (391)
T 1l0q_A 274 ATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWD 339 (391)
T ss_dssp TTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEE
T ss_pred CCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEE
Confidence 99888777765544321 11233321 3466677788899996
No 127
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.98 E-value=7.5e-31 Score=252.17 Aligned_cols=205 Identities=25% Similarity=0.414 Sum_probs=178.3
Q ss_pred EEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCC--CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCC
Q psy2671 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASD--GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPA 409 (573)
Q Consensus 333 ~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~ 409 (573)
..+.+|...|.+++|++++ .|++|+.|++|++|++.. +....++.+|...|.+++++++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~------------------ 64 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP------------------ 64 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCG------------------
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCC------------------
Confidence 4567899999999999887 799999999999999874 3667889999999999988632
Q ss_pred CchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc-cceeeeccccccEEEEEECCC--CCEEEEeeCCCcEEE
Q psy2671 410 NPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK-KSLARMTGHQQLINCVEFSPD--GRIIASASFDKSIKL 486 (573)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~-~~~~~~~~h~~~v~~v~~sp~--g~~las~s~dg~i~l 486 (573)
..+.+|++|+.|++|++||++++. ..+..+.+|...|.+++|+|+ |.+|++|+.||+|++
T Consensus 65 -----------------~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~ 127 (297)
T 2pm7_B 65 -----------------KFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSV 127 (297)
T ss_dssp -----------------GGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred -----------------CcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEE
Confidence 136789999999999999998654 345567789999999999997 899999999999999
Q ss_pred EeCCCCe--EEEeecCCcceEEEEEECCC-------------CCEEEEEeCCCcEEEEeCCccc----ccccccCcCCCE
Q psy2671 487 WDGRIGK--FITTLRGHVQAVYMVAWSSD-------------SRLLVSGSADSTLKVWNMKTKK----IEQDLPGHGDEV 547 (573)
Q Consensus 487 wd~~~~~--~~~~~~~h~~~v~~v~~s~d-------------g~~las~s~D~~v~vwd~~~~~----~~~~l~~h~~~v 547 (573)
||.+++. ....+.+|...|.+++|+|+ +++||+|+.|++|++||+++++ ....+.+|.+.|
T Consensus 128 wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V 207 (297)
T 2pm7_B 128 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV 207 (297)
T ss_dssp EEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred EEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCce
Confidence 9998763 24567899999999999997 5799999999999999998765 556789999999
Q ss_pred EEEEEccCC---CEEEEeeCCCcEEEcc
Q psy2671 548 YAVDWAPDG---EKVASGGKDKVLRLWQ 572 (573)
Q Consensus 548 ~~~~~s~d~---~~l~s~~~d~~i~iw~ 572 (573)
.+++|+|++ ++|++++.|++|++|+
T Consensus 208 ~~v~~sp~~~~~~~las~s~D~~v~iWd 235 (297)
T 2pm7_B 208 RDVAWSPTVLLRSYMASVSQDRTCIIWT 235 (297)
T ss_dssp EEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred EEEEECCCCCCceEEEEEECCCcEEEEE
Confidence 999999995 8999999999999996
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.98 E-value=2.8e-29 Score=260.25 Aligned_cols=327 Identities=13% Similarity=0.096 Sum_probs=251.3
Q ss_pred EEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeec
Q psy2671 117 KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPV 196 (573)
Q Consensus 117 ~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (573)
+|+|++.++++++.|++|++||..+++++..+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~----------------------------------------------- 176 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVID----------------------------------------------- 176 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEE-----------------------------------------------
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEe-----------------------------------------------
Confidence 378999999999999999999998876542211
Q ss_pred cccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEEC--CCCeeeEEecCCCCcEEEEEEcC----CCCeEEEEe-e
Q psy2671 197 TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV--TTQTPLFKCEGHKHWVLCIAWSP----DSKQLVSGC-K 269 (573)
Q Consensus 197 ~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~--~~~~~~~~~~~h~~~V~~v~~s~----dg~~l~sgs-~ 269 (573)
.||. +.+++|+|||++|++++.|++|++||+ .+++.+..+.. ...+.+++|+| ||++|++++ .
T Consensus 177 -------~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~ 246 (543)
T 1nir_A 177 -------TGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYW 246 (543)
T ss_dssp -------CSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEE
T ss_pred -------cCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEcc
Confidence 1343 889999999999999999999999999 78888877764 45679999999 999999988 4
Q ss_pred CCeEEEEECCCCceeccccc-C--------Cc-ccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEE--EecC
Q psy2671 270 NGVIHAWDSSTGKQIGQPMR-G--------HK-QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVR--VLTS 337 (573)
Q Consensus 270 dg~i~vwd~~~~~~~~~~~~-~--------h~-~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~~ 337 (573)
+++|.+||..+++.+..... + |. ..+.++.+.|. ....+++...++.|.+||....+... .+ .
T Consensus 247 ~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~----~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~ 321 (543)
T 1nir_A 247 PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE----HPEFIVNVKETGKVLLVNYKDIDNLTVTSI-G 321 (543)
T ss_dssp SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS----SSEEEEEETTTTEEEEEECTTSSSCEEEEE-E
T ss_pred CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC----CCEEEEEECCCCeEEEEEecCCCcceeEEe-c
Confidence 89999999998876533211 1 22 26778877663 23467788889999999998755433 33 3
Q ss_pred CCccEEEEEECCCcE-EEEE-eCCCeEEEEeCCCCeeeEeccC----CcceeeEEEeccCceeEEEEcCCCceeeCCCCc
Q psy2671 338 HTRSVTCIRWGGSGL-IYSA-SQDRTIKVWRASDGVMCRTLEG----HAHWVNTLALSTDYLMRVEATSTGGFKYDPANP 411 (573)
Q Consensus 338 h~~~v~~~~~~~~~~-l~s~-s~d~~i~vw~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 411 (573)
+...+..+.|++++. ++++ ..+++|.+||..++++...+.. |......+
T Consensus 322 ~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~------------------------- 376 (543)
T 1nir_A 322 AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF------------------------- 376 (543)
T ss_dssp CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-------------------------
T ss_pred cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-------------------------
Confidence 456677899998873 5544 4689999999999988776653 22111110
Q ss_pred hhhhhhhhhheeeeCCC-CcEEEEEe-CCCeEEEEcCCCC------ccceeeeccccccEEEEEECCCCCEEEEee----
Q psy2671 412 EESSKHALAKYQAQCPE-GEKLVSGS-DDFTLFLWNPEKE------KKSLARMTGHQQLINCVEFSPDGRIIASAS---- 479 (573)
Q Consensus 412 ~~~~~~~~~~~~~~~~~-~~~l~sg~-~dg~i~lwd~~~~------~~~~~~~~~h~~~v~~v~~sp~g~~las~s---- 479 (573)
..|+ +..++++. .|++|.+||+.+. .+.+..+.+|...+..|+|+|+|+.|++++
T Consensus 377 -------------~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~ 443 (543)
T 1nir_A 377 -------------VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNP 443 (543)
T ss_dssp -------------EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCS
T ss_pred -------------CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCC
Confidence 1244 56677776 6899999998762 456778888887888999999999999987
Q ss_pred ---CCCcEEEEeCCCCeEE-Eee--------cCCcceEEEEEECCCCCEEEEEe-----CCCcEEEEeCCcccccccccC
Q psy2671 480 ---FDKSIKLWDGRIGKFI-TTL--------RGHVQAVYMVAWSSDSRLLVSGS-----ADSTLKVWNMKTKKIEQDLPG 542 (573)
Q Consensus 480 ---~dg~i~lwd~~~~~~~-~~~--------~~h~~~v~~v~~s~dg~~las~s-----~D~~v~vwd~~~~~~~~~l~~ 542 (573)
.+++|.+||..+++.. ..+ ..+...+..++|+|||+.|+++. .|+.|.|||.+++++++.++.
T Consensus 444 ~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 523 (543)
T 1nir_A 444 DARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKD 523 (543)
T ss_dssp SHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred CcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecC
Confidence 3779999999988766 443 45667899999999999988763 479999999999999888875
Q ss_pred c
Q psy2671 543 H 543 (573)
Q Consensus 543 h 543 (573)
+
T Consensus 524 ~ 524 (543)
T 1nir_A 524 P 524 (543)
T ss_dssp T
T ss_pred C
Confidence 4
No 129
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.97 E-value=1.5e-28 Score=276.30 Aligned_cols=387 Identities=10% Similarity=0.086 Sum_probs=282.3
Q ss_pred ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ 188 (573)
Q Consensus 109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
+...+.+.+||| ++||.++. +.|.+||+.+++..
T Consensus 13 ~~~~~~~~~~S~--~~iaf~~~-~~l~~~~~~gg~~~------------------------------------------- 46 (1045)
T 1k32_A 13 MPNLLLNPDIHG--DRIIFVCC-DDLWEHDLKSGSTR------------------------------------------- 46 (1045)
T ss_dssp CCCCCEEEEEET--TEEEEEET-TEEEEEETTTCCEE-------------------------------------------
T ss_pred ccceEeCcEEeC--CEEEEEEC-CcEEEEECCCCcEE-------------------------------------------
Confidence 566889999995 57887765 68999999776421
Q ss_pred eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCC------CeEEEEECCCCeeeEEecCCCCcE-------EEE
Q psy2671 189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD------TTVRFWDVTTQTPLFKCEGHKHWV-------LCI 255 (573)
Q Consensus 189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d------~~i~iwd~~~~~~~~~~~~h~~~V-------~~v 255 (573)
.+.+|...+.+++|||||++||+++.+ ..|++||+.+++ ...+..|...+ .++
T Consensus 47 -------------~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~ 112 (1045)
T 1k32_A 47 -------------KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVA 112 (1045)
T ss_dssp -------------EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEE
T ss_pred -------------EeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccc
Confidence 133688899999999999999988643 489999998876 56778888888 999
Q ss_pred EEcCCCCeEEEEeeC------CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeC------------
Q psy2671 256 AWSPDSKQLVSGCKN------GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK------------ 317 (573)
Q Consensus 256 ~~s~dg~~l~sgs~d------g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~------------ 317 (573)
+|||||+.+++++.+ ..|.+|++.++... .+..+.. ..+.|+| + .+++++.
T Consensus 113 ~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~--~l~~~~~--~~~~~sp------G-~l~~~~~~~~~~~~~~~~g 181 (1045)
T 1k32_A 113 GFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFV--PLNLGPA--THILFAD------G-RRVIGRNTFELPHWKGYRG 181 (1045)
T ss_dssp EECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEE--ECCSCSC--SEEEEET------T-EEEEEESCSCCTTSTTCCS
T ss_pred cCCCCCEEEEEECCcCCCcccceEEEEECCCCCeE--EecCCCc--ceeeeCC------C-EEEEeccCCCccccccccC
Confidence 999999977777754 46888888776532 1222221 2344543 4 6676642
Q ss_pred CCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCC-CeeeEeccCCcceeeEEEeccCceeEE
Q psy2671 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASD-GVMCRTLEGHAHWVNTLALSTDYLMRV 396 (573)
Q Consensus 318 dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~ 396 (573)
+...++|....+.....+.+|...+.++.|+++..+++++.|+++++|.+.. +.....+..|.. +...+++++....+
T Consensus 182 ~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~-~~~~~~SpDG~~la 260 (1045)
T 1k32_A 182 GTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTD-YYPRHLNTDGRRIL 260 (1045)
T ss_dssp TTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCS-SCEEEEEESSSCEE
T ss_pred CCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCC-cceeeEcCCCCEEE
Confidence 3445666543333445568999999999999887778888999999998653 444455555543 45667777765333
Q ss_pred EEcCCCceeeCCCCchhhh--------------hhhhhheeeeC-CCCcEEEEEeCCCeEEEEcCCCCccceeeeccccc
Q psy2671 397 EATSTGGFKYDPANPEESS--------------KHALAKYQAQC-PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461 (573)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~-~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~ 461 (573)
.........++........ .........++ |+|+.+++++ ++.+++|+..... ...+..|..
T Consensus 261 ~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~--~~~~~~~~~ 337 (1045)
T 1k32_A 261 FSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY--VLKVPEPLR 337 (1045)
T ss_dssp EEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB--EEECSCCSC
T ss_pred EEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc--eEEccCCCc
Confidence 3322222223221100000 00112344568 9999999888 8899999987643 334566766
Q ss_pred -cEEEEEECCCCCEEEEeeCCCcEE-EEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc
Q psy2671 462 -LINCVEFSPDGRIIASASFDKSIK-LWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD 539 (573)
Q Consensus 462 -~v~~v~~sp~g~~las~s~dg~i~-lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~ 539 (573)
.+..++|+ ||+.|+.++.++.+. +||..+++.. .+.+|...+..++|||||++||+++.++.|++||+.+++....
T Consensus 338 ~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~ 415 (1045)
T 1k32_A 338 IRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVI 415 (1045)
T ss_dssp EEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEe
Confidence 79999999 999999999888888 9998877654 4447878899999999999999999999999999999988777
Q ss_pred ccCcCCCEEEEEEccCCCEEEEeeCCC----------cEEEcc
Q psy2671 540 LPGHGDEVYAVDWAPDGEKVASGGKDK----------VLRLWQ 572 (573)
Q Consensus 540 l~~h~~~v~~~~~s~d~~~l~s~~~d~----------~i~iw~ 572 (573)
+.+|.+.+.+++|||||++|++++.++ .|++|+
T Consensus 416 ~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 416 ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp EECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred ccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEE
Confidence 778989999999999999999887754 899996
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=6.4e-28 Score=250.08 Aligned_cols=315 Identities=11% Similarity=0.073 Sum_probs=240.0
Q ss_pred EcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEEC--CCCceecccccCCc
Q psy2671 215 FSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS--STGKQIGQPMRGHK 292 (573)
Q Consensus 215 fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~--~~~~~~~~~~~~h~ 292 (573)
|+|++..+++++.|++|.+||..+++.+.++..+.. +.+++|+|||++|++++.|+.|.+||+ .+++.+.. +. +.
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~-i~-~g 221 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE-IK-IG 221 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE-EE-CC
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEE-Ee-cC
Confidence 889999999999999999999999998888873333 889999999999999999999999999 77765533 33 33
Q ss_pred ccEEEEEecccccCCCCCEEEEEe-CCCcEEEEECCCCeEEEEecCC-----------CccEEEEEECCCc--EEEEEeC
Q psy2671 293 QWITALSWEPFHLNHQCRRFASSG-KDGAIRIWDVILSQCVRVLTSH-----------TRSVTCIRWGGSG--LIYSASQ 358 (573)
Q Consensus 293 ~~v~~~~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~h-----------~~~v~~~~~~~~~--~l~s~s~ 358 (573)
..+..++|+|+. ..+++++++++ .+++|++||..+.++++.+..+ ...+..+.+++++ .+++...
T Consensus 222 ~~p~~va~sp~~-~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 222 IEARSVESSKFK-GYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp SEEEEEEECCST-TCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCcceEEeCCCc-CCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 456778776521 11577887776 5899999999999988877642 2368889998754 5777888
Q ss_pred CCeEEEEeCCCCeeeE--eccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEE-
Q psy2671 359 DRTIKVWRASDGVMCR--TLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG- 435 (573)
Q Consensus 359 d~~i~vw~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg- 435 (573)
+++|.+||..++..+. .+. +..++..+ .++|+|++++++
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~-------------------------------------~~spdg~~l~va~ 342 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIG-AAPFLHDG-------------------------------------GWDSSHRYFMTAA 342 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEE-CCSSCCCE-------------------------------------EECTTSCEEEEEE
T ss_pred CCeEEEEEecCCCcceeEEec-cCcCccCc-------------------------------------eECCCCCEEEEEe
Confidence 9999999998764332 111 22222222 234778876554
Q ss_pred eCCCeEEEEcCCCCccceeeecc----ccccEEEEEECCC-CCEEEEee-CCCcEEEEeCCC-------CeEEEeecCCc
Q psy2671 436 SDDFTLFLWNPEKEKKSLARMTG----HQQLINCVEFSPD-GRIIASAS-FDKSIKLWDGRI-------GKFITTLRGHV 502 (573)
Q Consensus 436 ~~dg~i~lwd~~~~~~~~~~~~~----h~~~v~~v~~sp~-g~~las~s-~dg~i~lwd~~~-------~~~~~~~~~h~ 502 (573)
..+++|.+||+.+++. ...+.. |......+ ++|+ |.+++++. .|++|.+||..+ ++.++++.+|.
T Consensus 343 ~~~~~v~v~D~~tg~l-~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g 420 (543)
T 1nir_A 343 NNSNKVAVIDSKDRRL-SALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQG 420 (543)
T ss_dssp GGGTEEEEEETTTTEE-EEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC
T ss_pred cCCCeEEEEECCCCeE-EEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCC
Confidence 5689999999987643 333332 54433333 4777 67777775 689999999988 89999999998
Q ss_pred ceEEEEEECCCCCEEEEEe-------CCCcEEEEeCCccccc-ccc--------cCcCCCEEEEEEccCCCEEEEee---
Q psy2671 503 QAVYMVAWSSDSRLLVSGS-------ADSTLKVWNMKTKKIE-QDL--------PGHGDEVYAVDWAPDGEKVASGG--- 563 (573)
Q Consensus 503 ~~v~~v~~s~dg~~las~s-------~D~~v~vwd~~~~~~~-~~l--------~~h~~~v~~~~~s~d~~~l~s~~--- 563 (573)
..+..++++|||++|++++ .+++|.+||+.+++.. ..+ ..+...+..++|+|||++|..+.
T Consensus 421 ~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~ 500 (543)
T 1nir_A 421 GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNG 500 (543)
T ss_dssp SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECC
T ss_pred CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecC
Confidence 8888999999999999987 2779999999988876 332 45678899999999999988652
Q ss_pred --CCCcEEEccC
Q psy2671 564 --KDKVLRLWQN 573 (573)
Q Consensus 564 --~d~~i~iw~~ 573 (573)
.|+.|.+|+.
T Consensus 501 ~~~~~~i~v~D~ 512 (543)
T 1nir_A 501 KNDSSALVVVDD 512 (543)
T ss_dssp TTSCCEEEEEET
T ss_pred CCCCCeEEEEEC
Confidence 4799999973
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=9.5e-29 Score=248.74 Aligned_cols=247 Identities=17% Similarity=0.186 Sum_probs=185.7
Q ss_pred CCeEEEEeCC------CeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCC---eEEEEECCCCceeccccc
Q psy2671 219 GRSLASGSGD------TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG---VIHAWDSSTGKQIGQPMR 289 (573)
Q Consensus 219 g~~las~s~d------~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg---~i~vwd~~~~~~~~~~~~ 289 (573)
+..++.++.+ ++|++||+.. .....+.+|...|.+++|+|||++|++++.++ .|++||+.+++.. .+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~--~l~ 219 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR--QVA 219 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE--EEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE--Eee
Confidence 5566666654 7999999975 44566778899999999999999999999885 9999999988764 355
Q ss_pred CCcccEEEEEecccccCCCCCEEE-EEeCCCc--EEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeC-CCeEEE
Q psy2671 290 GHKQWITALSWEPFHLNHQCRRFA-SSGKDGA--IRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQ-DRTIKV 364 (573)
Q Consensus 290 ~h~~~v~~~~~~~~~~~~~~~~l~-s~~~dg~--v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~-d~~i~v 364 (573)
.|...+.+++|+| +++.|+ +++.++. |++||+.+++. ..+..|...+.+++|++++ .|+.++. ++..
T Consensus 220 ~~~~~~~~~~~sp-----dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~-- 291 (415)
T 2hqs_A 220 SFPRHNGAPAFSP-----DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRP-- 291 (415)
T ss_dssp CCSSCEEEEEECT-----TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSC--
T ss_pred cCCCcccCEEEcC-----CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCc--
Confidence 6778899999877 567777 6666655 88889887765 4566677777888887765 3444443 3321
Q ss_pred EeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEE
Q psy2671 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLW 444 (573)
Q Consensus 365 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lw 444 (573)
.|++|
T Consensus 292 ---------------------------------------------------------------------------~i~~~ 296 (415)
T 2hqs_A 292 ---------------------------------------------------------------------------QVYKV 296 (415)
T ss_dssp ---------------------------------------------------------------------------EEEEE
T ss_pred ---------------------------------------------------------------------------EEEEE
Confidence 23333
Q ss_pred cCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC---CcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEe
Q psy2671 445 NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD---KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521 (573)
Q Consensus 445 d~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d---g~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s 521 (573)
|+.++. ...+..+...+.+++|+|||++|++++.+ ..|++||..+++. ..+..|. .+.+++|+|||++|++++
T Consensus 297 d~~~~~--~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s 372 (415)
T 2hqs_A 297 NINGGA--PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSS 372 (415)
T ss_dssp ETTSSC--CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEE
T ss_pred ECCCCC--EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEE
Confidence 333221 12233344567889999999999988764 5899999998876 4555554 789999999999999998
Q ss_pred CCC---cEEEEeCCcccccccccCcCCCEEEEEEccCC
Q psy2671 522 ADS---TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDG 556 (573)
Q Consensus 522 ~D~---~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~ 556 (573)
.|+ .|++||+. +.....+.+|.+.|.+++|+|.-
T Consensus 373 ~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 373 SQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp EETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCC
T ss_pred cCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccc
Confidence 877 79999997 45567789999999999999964
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=4.2e-27 Score=255.87 Aligned_cols=346 Identities=12% Similarity=0.164 Sum_probs=235.7
Q ss_pred cccEEEEEEcCCCCeeEEeeC-CC-----cEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671 110 AEAVISVKFSPNGRSLASGSG-DT-----TVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183 (573)
Q Consensus 110 ~~~V~~l~~s~~~~~lat~s~-D~-----~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (573)
...|.+++|||||++||+++. |+ +|++||+.+++........... + ....+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~--~-------------------~~~~~-- 92 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVL--P-------------------GTETL-- 92 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC-----------------------------
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcc--c-------------------ccccc--
Confidence 557999999999999999998 88 9999999988653221100000 0 00000
Q ss_pred EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcCCC
Q psy2671 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPDS 261 (573)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~dg 261 (573)
..... ..+ . ..... ....|.+++|||||++|++++. +.|++||+.++. ....+..|...+.+++|||||
T Consensus 93 ~~~~~-~~~--~----~~~~~-~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG 163 (741)
T 2ecf_A 93 SDEEK-ARR--E----RQRIA-AMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKG 163 (741)
T ss_dssp ----------------------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTS
T ss_pred cchhh-hhh--h----hhhhc-cccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCC
Confidence 00000 000 0 00001 1234778999999999999986 899999998873 345567788889999999999
Q ss_pred CeEEEEeeCCeEEEEECCCCceecccccCCccc----------------EEEEEecccccCCCCCEEEEEeCCC------
Q psy2671 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQW----------------ITALSWEPFHLNHQCRRFASSGKDG------ 319 (573)
Q Consensus 262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~----------------v~~~~~~~~~~~~~~~~l~s~~~dg------ 319 (573)
++|++++ ++.|++||+.+++... ....+... +.++.|+| ++++|+.++.|+
T Consensus 164 ~~la~~~-~~~i~~~d~~~g~~~~-~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-----Dg~~l~~~~~d~~~~~~~ 236 (741)
T 2ecf_A 164 GFVSFIR-GRNLWVIDLASGRQMQ-LTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-----DDSAIAYARIDESPVPVQ 236 (741)
T ss_dssp SEEEEEE-TTEEEEEETTTTEEEE-CCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-----TSSCEEEEEEECTTSCEE
T ss_pred CEEEEEe-CCcEEEEecCCCCEEE-eccCCccceeccccceeeeeccccccceEECC-----CCCEEEEEEEcCCCCceE
Confidence 9999887 5699999998876542 22222221 25566665 778888887665
Q ss_pred ---------------------------cEEEEECCC-CeEEEEec--CCCccEEEEEECCCc-EEEEEe-----CCCeEE
Q psy2671 320 ---------------------------AIRIWDVIL-SQCVRVLT--SHTRSVTCIRWGGSG-LIYSAS-----QDRTIK 363 (573)
Q Consensus 320 ---------------------------~v~iwd~~~-~~~~~~~~--~h~~~v~~~~~~~~~-~l~s~s-----~d~~i~ 363 (573)
.|++||+.+ ++...... .|...+..++| +++ .|+.++ .+..|.
T Consensus 237 ~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~ 315 (741)
T 2ecf_A 237 KRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLV 315 (741)
T ss_dssp EEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEE
T ss_pred ecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEE
Confidence 788999988 76655443 47788999999 887 455443 357899
Q ss_pred EEeCCCCeeeEeccCCcc-ee---eEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671 364 VWRASDGVMCRTLEGHAH-WV---NTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF 439 (573)
Q Consensus 364 vw~~~~~~~~~~~~~~~~-~v---~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 439 (573)
+||+.++.....+..+.. ++ ..+ .++|+|+++++++.||
T Consensus 316 ~~d~~~g~~~~~~~~~~~~~~~~~~~~-------------------------------------~~spdg~~~~~~~~~g 358 (741)
T 2ecf_A 316 EVTLASNQQRVLAHETSPTWVPLHNSL-------------------------------------RFLDDGSILWSSERTG 358 (741)
T ss_dssp EEETTTCCEEEEEEEECSSCCCCCSCC-------------------------------------EECTTSCEEEEECTTS
T ss_pred EEECCCCceEEEEEcCCCCcCCcCCce-------------------------------------EECCCCeEEEEecCCC
Confidence 999998876554433221 11 111 2347788888999999
Q ss_pred eEEEEcCCCCccceeeeccccccEEEE-EECCCCCEEEE-eeCCC--cEEEEeCCC-CeEEEeecCCcceEEEEEECCCC
Q psy2671 440 TLFLWNPEKEKKSLARMTGHQQLINCV-EFSPDGRIIAS-ASFDK--SIKLWDGRI-GKFITTLRGHVQAVYMVAWSSDS 514 (573)
Q Consensus 440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v-~~sp~g~~las-~s~dg--~i~lwd~~~-~~~~~~~~~h~~~v~~v~~s~dg 514 (573)
.+++|....... ...+..|...+..+ .|+|+|+.|+. ++.++ .++||+... ++....+.. ...+..++|||||
T Consensus 359 ~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg 436 (741)
T 2ecf_A 359 FQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNA 436 (741)
T ss_dssp SCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTS
T ss_pred ccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCC
Confidence 877776553333 56677777778887 59999997754 55555 899998764 554566655 5668899999999
Q ss_pred CEEEEEeCC----CcEEEEeCCcc
Q psy2671 515 RLLVSGSAD----STLKVWNMKTK 534 (573)
Q Consensus 515 ~~las~s~D----~~v~vwd~~~~ 534 (573)
++|+....+ ..+.+|+..++
T Consensus 437 ~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 437 SVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp SEEEEEEEETTEEEEEEEEETTSC
T ss_pred CEEEEEecCCCCCCeEEEEEcCCC
Confidence 998866443 46888987543
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=2e-26 Score=250.46 Aligned_cols=316 Identities=14% Similarity=0.170 Sum_probs=231.2
Q ss_pred CCcEEEEEEcCCCCeEEEEeC-CC-----eEEEEECCCCeeeEEecCCC------------------------CcEEEEE
Q psy2671 207 AEAVISVKFSPNGRSLASGSG-DT-----TVRFWDVTTQTPLFKCEGHK------------------------HWVLCIA 256 (573)
Q Consensus 207 ~~~V~~~~fsp~g~~las~s~-d~-----~i~iwd~~~~~~~~~~~~h~------------------------~~V~~v~ 256 (573)
...|.+++|||||++|++++. |+ +|++||+.+++.......+. ..|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457899999999999999998 88 99999999987665554432 2378999
Q ss_pred EcCCCCeEEEEeeCCeEEEEECCCC---ceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy2671 257 WSPDSKQLVSGCKNGVIHAWDSSTG---KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVR 333 (573)
Q Consensus 257 ~s~dg~~l~sgs~dg~i~vwd~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 333 (573)
|||||++|++++. +.|++||+.++ .. ..+..|...+..+.|+| ++++++.++ ++.|++||+.+++..+
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~--~~l~~~~~~~~~~~~SP-----DG~~la~~~-~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAV--RQLTHGEGFATDAKLSP-----KGGFVSFIR-GRNLWVIDLASGRQMQ 186 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSC--CBCCCSSSCEEEEEECT-----TSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceE--EEcccCCcccccccCCC-----CCCEEEEEe-CCcEEEEecCCCCEEE
Confidence 9999999999886 99999999887 33 34566777899999877 678888877 5699999999887766
Q ss_pred EecCCCcc----------------EEEEEECCCc-EEEEEeCCC---------------------------------eEE
Q psy2671 334 VLTSHTRS----------------VTCIRWGGSG-LIYSASQDR---------------------------------TIK 363 (573)
Q Consensus 334 ~~~~h~~~----------------v~~~~~~~~~-~l~s~s~d~---------------------------------~i~ 363 (573)
....+... +.++.|++++ .|++++.|+ .|.
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 55544432 3779999998 477776654 677
Q ss_pred EEeCCC-CeeeEecc--CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC---
Q psy2671 364 VWRASD-GVMCRTLE--GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD--- 437 (573)
Q Consensus 364 vw~~~~-~~~~~~~~--~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~--- 437 (573)
+||+.+ +....... .|...+..+++ + +|+.|+.++.
T Consensus 267 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~-p-------------------------------------Dg~~l~~~~~~~~ 308 (741)
T 2ecf_A 267 VISPAEQAQTQWIDLGKEQDIYLARVNW-R-------------------------------------DPQHLSFQRQSRD 308 (741)
T ss_dssp EECSSTTCCCEEECCCSCSSEEEEEEEE-E-------------------------------------ETTEEEEEEEETT
T ss_pred EEECCCCCceEEecCCCCcceEEEEEEe-C-------------------------------------CCCEEEEEEeccc
Confidence 778776 65443322 24445555554 4 4666665543
Q ss_pred --CCeEEEEcCCCCccceeeeccccc----cEEEEEECCCCCEEEEeeCCCcEEEEeCC-CCeEEEeecCCcceEEEE-E
Q psy2671 438 --DFTLFLWNPEKEKKSLARMTGHQQ----LINCVEFSPDGRIIASASFDKSIKLWDGR-IGKFITTLRGHVQAVYMV-A 509 (573)
Q Consensus 438 --dg~i~lwd~~~~~~~~~~~~~h~~----~v~~v~~sp~g~~las~s~dg~i~lwd~~-~~~~~~~~~~h~~~v~~v-~ 509 (573)
+..|++||+.++.. ...+..+.. .+..++|+|||+++++++.||.++||... .++ ...+..|...+..+ +
T Consensus 309 ~~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~ 386 (741)
T 2ecf_A 309 QKKLDLVEVTLASNQQ-RVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLA 386 (741)
T ss_dssp SSEEEEEEEETTTCCE-EEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEE
T ss_pred CCeEEEEEEECCCCce-EEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeE
Confidence 56899999887643 222223322 34678999999999999999988888654 345 77788787788877 5
Q ss_pred ECCCCCEEEE-EeCCC--cEEEEeCCc-ccccccccCcCCCEEEEEEccCCCEEEEeeCC----CcEEEcc
Q psy2671 510 WSSDSRLLVS-GSADS--TLKVWNMKT-KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD----KVLRLWQ 572 (573)
Q Consensus 510 ~s~dg~~las-~s~D~--~v~vwd~~~-~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d----~~i~iw~ 572 (573)
|+|||+.|+. ++.++ .++||++.. ++....+.+ ...+.+++|||||++|+....+ ..+.+|+
T Consensus 387 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~ 456 (741)
T 2ecf_A 387 VDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFR 456 (741)
T ss_dssp EETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEE
T ss_pred EeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEE
Confidence 9999997754 45555 899999864 554556665 5678999999999998865433 3455553
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.95 E-value=2.3e-27 Score=257.18 Aligned_cols=342 Identities=14% Similarity=0.108 Sum_probs=230.1
Q ss_pred EEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEE
Q psy2671 113 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQ 192 (573)
Q Consensus 113 V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (573)
+.+++|+|||+++++ +.|++|++||..++++...
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~--------------------------------------------- 52 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVL--------------------------------------------- 52 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEE---------------------------------------------
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEE---------------------------------------------
Confidence 567899999998877 7899999999988754311
Q ss_pred EeeccccccCCCCCCC---cEEEEEEcCCCCeEEEEeCC---------CeEEEEECCCCee--eEEecCCCCcEEEEEEc
Q psy2671 193 VRPVTRCTSSMPGHAE---AVISVKFSPNGRSLASGSGD---------TTVRFWDVTTQTP--LFKCEGHKHWVLCIAWS 258 (573)
Q Consensus 193 ~~~~~~~~~~~~gh~~---~V~~~~fsp~g~~las~s~d---------~~i~iwd~~~~~~--~~~~~~h~~~V~~v~~s 258 (573)
+.+|.. .|.+++|||||++|++++.+ +.+.+||+.+++. +....+|...+.+++||
T Consensus 53 ----------~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~S 122 (723)
T 1xfd_A 53 ----------IEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWG 122 (723)
T ss_dssp ----------ECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBC
T ss_pred ----------eccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEEC
Confidence 112332 48899999999999999875 7888999998765 22233455568899999
Q ss_pred CCCCeEEEEeeCCeEEEEECCCCceecccccCCccc------------------EEEEEecccccCCCCCEEEEEeCC-C
Q psy2671 259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQW------------------ITALSWEPFHLNHQCRRFASSGKD-G 319 (573)
Q Consensus 259 ~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~------------------v~~~~~~~~~~~~~~~~l~s~~~d-g 319 (573)
|||++|++++. +.|++||+.+++.... ...+... +.++.|+| +++.|+.++.| +
T Consensus 123 PdG~~la~~~~-~~i~~~~~~~g~~~~~-~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-----Dg~~la~~~~~~~ 195 (723)
T 1xfd_A 123 PKGQQLIFIFE-NNIYYCAHVGKQAIRV-VSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-----DGTRLAYAAINDS 195 (723)
T ss_dssp SSTTCEEEEET-TEEEEESSSSSCCEEE-ECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-----TSSEEEEEEEECT
T ss_pred CCCCEEEEEEC-CeEEEEECCCCceEEE-ecCCCCCceECcccceeEEEEeccCcceEEECC-----CCCEEEEEEECCC
Confidence 99999999876 7999999988765422 2222221 26778776 67888887654 4
Q ss_pred cEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCC------cceeeEEEeccCce
Q psy2671 320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH------AHWVNTLALSTDYL 393 (573)
Q Consensus 320 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~------~~~v~~~~~s~~~~ 393 (573)
.+++|++.... ..+...+..+.+.++|.. ..+..|.+||+.++.....+..+ ...+..++++
T Consensus 196 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~G~~---~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~S---- 263 (723)
T 1xfd_A 196 RVPIMELPTYT-----GSIYPTVKPYHYPKAGSE---NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWA---- 263 (723)
T ss_dssp TSCEEEECCCS-----SSSSCCCEEEECCBTTSC---CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEES----
T ss_pred ccceEEeeccC-----CcCCCcceeccCCCCCCC---CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEe----
Confidence 67777754221 112334667777655531 33458999999888755555543 4455556555
Q ss_pred eEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC----CCeEEEEcCCCCccceeeeccccccE----EE
Q psy2671 394 MRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD----DFTLFLWNPEKEKKSLARMTGHQQLI----NC 465 (573)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~----dg~i~lwd~~~~~~~~~~~~~h~~~v----~~ 465 (573)
|+|+.+++.+. +..|++||+.++.........+...+ ..
T Consensus 264 ---------------------------------pDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 310 (723)
T 1xfd_A 264 ---------------------------------TSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEE 310 (723)
T ss_dssp ---------------------------------SSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCC
T ss_pred ---------------------------------CCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCC
Confidence 45666655542 35799999877643221112223333 37
Q ss_pred EEECCCCCEEEE--eeCCC------cEEEEe-CCCCe--EEEeecCCcceEE-EEEECCCCCEEEEEeCC---CcEEEEe
Q psy2671 466 VEFSPDGRIIAS--ASFDK------SIKLWD-GRIGK--FITTLRGHVQAVY-MVAWSSDSRLLVSGSAD---STLKVWN 530 (573)
Q Consensus 466 v~~sp~g~~las--~s~dg------~i~lwd-~~~~~--~~~~~~~h~~~v~-~v~~s~dg~~las~s~D---~~v~vwd 530 (573)
++|+|||+.|+. +..++ .|.+|| ...++ ....+..+...+. .++|||||+.|+..+.+ +.++||+
T Consensus 311 ~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 311 PVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp CEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred ceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 899999997775 45677 577778 34443 1445543333344 47999999999866655 7899999
Q ss_pred CCccc--ccccccC---cCCCEEEEEEccCCCEEEEe
Q psy2671 531 MKTKK--IEQDLPG---HGDEVYAVDWAPDGEKVASG 562 (573)
Q Consensus 531 ~~~~~--~~~~l~~---h~~~v~~~~~s~d~~~l~s~ 562 (573)
+.... ....+.. |...+..++|||||++|+..
T Consensus 391 ~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 391 ANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp ECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred EeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence 86432 3334443 66778899999999988754
No 135
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=1.1e-25 Score=226.29 Aligned_cols=277 Identities=16% Similarity=0.144 Sum_probs=206.5
Q ss_pred CCCcEEEEEEcCCCC-eEEEEe----CCC----eEEEEEC--CCCeee--EEecCCCCcEEEEEEcC-------------
Q psy2671 206 HAEAVISVKFSPNGR-SLASGS----GDT----TVRFWDV--TTQTPL--FKCEGHKHWVLCIAWSP------------- 259 (573)
Q Consensus 206 h~~~V~~~~fsp~g~-~las~s----~d~----~i~iwd~--~~~~~~--~~~~~h~~~V~~v~~s~------------- 259 (573)
+...+....|++.|. .+++|+ .|| +|+|||+ .+++.+ ..+.+|...+..+++++
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~ 140 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 140 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence 445677778888875 555776 567 9999999 888877 44788888888887764
Q ss_pred -CCCeEEEEeeC------CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCC---cEEEEECCCC
Q psy2671 260 -DSKQLVSGCKN------GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG---AIRIWDVILS 329 (573)
Q Consensus 260 -dg~~l~sgs~d------g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg---~v~iwd~~~~ 329 (573)
.+.+++.++.+ +.|++||+..+.. ..+.+|...+.+++|+| +++++++++.++ .|++||+.++
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~--~~l~~~~~~v~~~~~Sp-----dg~~la~~s~~~~~~~i~~~d~~tg 213 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ--FVVHRSPQPLMSPAWSP-----DGSKLAYVTFESGRSALVIQTLANG 213 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSCSC--EEEEEESSCEEEEEECT-----TSSEEEEEECTTSSCEEEEEETTTC
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCCCC--EEEeCCCCcceeeEEcC-----CCCEEEEEEecCCCcEEEEEECCCC
Confidence 26677777665 7999999975432 34567888999999987 678899998875 8999999887
Q ss_pred eEEEEecCCCccEEEEEECCCcE-EE-EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeC
Q psy2671 330 QCVRVLTSHTRSVTCIRWGGSGL-IY-SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407 (573)
Q Consensus 330 ~~~~~~~~h~~~v~~~~~~~~~~-l~-s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~ 407 (573)
+.. .+..|...+.+++|++++. |+ +++.|+.
T Consensus 214 ~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~---------------------------------------------- 246 (415)
T 2hqs_A 214 AVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGS---------------------------------------------- 246 (415)
T ss_dssp CEE-EEECCSSCEEEEEECTTSSEEEEEECTTSS----------------------------------------------
T ss_pred cEE-EeecCCCcccCEEEcCCCCEEEEEEecCCC----------------------------------------------
Confidence 764 4556777788888877662 33 4444332
Q ss_pred CCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC-CC--cE
Q psy2671 408 PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-DK--SI 484 (573)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~-dg--~i 484 (573)
..|++||+.++. ...+..|...+.+++|+|||+.|++++. ++ .|
T Consensus 247 -------------------------------~~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i 293 (415)
T 2hqs_A 247 -------------------------------LNLYVMDLASGQ--IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQV 293 (415)
T ss_dssp -------------------------------CEEEEEETTTCC--EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred -------------------------------ceEEEEECCCCC--EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEE
Confidence 123444443322 2334456677899999999999998876 45 67
Q ss_pred EEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCC---CcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEE
Q psy2671 485 KLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD---STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS 561 (573)
Q Consensus 485 ~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D---~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s 561 (573)
.+||..+++. ..+..|...+.+++|||||++|++++.+ ..|++||+.+++.. .+..|. .+.+++|+|||++|++
T Consensus 294 ~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~ 370 (415)
T 2hqs_A 294 YKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIY 370 (415)
T ss_dssp EEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEE
T ss_pred EEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEE
Confidence 7789888764 4455666788999999999999988764 58999999988764 455554 8999999999999999
Q ss_pred eeCCC---cEEEcc
Q psy2671 562 GGKDK---VLRLWQ 572 (573)
Q Consensus 562 ~~~d~---~i~iw~ 572 (573)
++.|+ .|++|+
T Consensus 371 ~s~~~~~~~l~~~d 384 (415)
T 2hqs_A 371 SSSQGMGSVLNLVS 384 (415)
T ss_dssp EEEETTEEEEEEEE
T ss_pred EEcCCCccEEEEEE
Confidence 98887 688885
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=2.4e-24 Score=232.75 Aligned_cols=283 Identities=14% Similarity=0.149 Sum_probs=201.6
Q ss_pred CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC-----C
Q psy2671 207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST-----G 281 (573)
Q Consensus 207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~-----~ 281 (573)
...|.+++|||| +.++.+. |++|++||+.+++... +..+...+.+++|||||++|++ +.++.|++||+.+ +
T Consensus 81 ~~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 81 AFPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAY-VRNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp -CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEE-EETTEEEEEECBCTTSCCC
T ss_pred ccCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEE-EECCeEEEEecCcccccCC
Confidence 356899999999 6666554 5999999999886543 4456667888999999999998 4789999999988 7
Q ss_pred ceecccccCCccc--------------EEEEEecccccCCCCCEEEEEe-------------------------------
Q psy2671 282 KQIGQPMRGHKQW--------------ITALSWEPFHLNHQCRRFASSG------------------------------- 316 (573)
Q Consensus 282 ~~~~~~~~~h~~~--------------v~~~~~~~~~~~~~~~~l~s~~------------------------------- 316 (573)
+.... ...+... +.++.|+| ++++|++++
T Consensus 157 ~~~~~-~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-----Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~ 230 (706)
T 2z3z_A 157 RAIAV-TIDGTETLVYGQAVHQREFGIEKGTFWSP-----KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT 230 (706)
T ss_dssp CCEES-CSCCBTTEEESSCCGGGCTTCCCSEEECT-----TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred CcEEe-ccCCCCCeEcccchhhhhcCCCceEEECC-----CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence 64422 2222222 36677765 778898887
Q ss_pred --CCCcEEEEECCCCeEEEEec--CCCccEEEEEECCCc-EEEEEeCCC-----eEEEEeCCCCeeeEecc--CCcceee
Q psy2671 317 --KDGAIRIWDVILSQCVRVLT--SHTRSVTCIRWGGSG-LIYSASQDR-----TIKVWRASDGVMCRTLE--GHAHWVN 384 (573)
Q Consensus 317 --~dg~v~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~-~l~s~s~d~-----~i~vw~~~~~~~~~~~~--~~~~~v~ 384 (573)
.+..|++||+.+++...... .|...+.+++|++++ .+++++.++ .|.+||+.++.....+. .+..++.
T Consensus 231 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 231 PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVE 310 (706)
T ss_dssp CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence 45679999999887655442 567789999999998 577777665 89999998873222221 1111100
Q ss_pred EEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC--CCcEEEEEeCCCeEEEEcCCCCccceeeecccccc
Q psy2671 385 TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP--EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL 462 (573)
Q Consensus 385 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~ 462 (573)
......++| +|+++++++.|+.+++|...........+..|...
T Consensus 311 ----------------------------------~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~ 356 (706)
T 2z3z_A 311 ----------------------------------PLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWE 356 (706)
T ss_dssp ----------------------------------CCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSC
T ss_pred ----------------------------------ccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeE
Confidence 000113457 78889999999999999875333445666777777
Q ss_pred EEE-EEECCCCCEEEEeeC-CC----cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCC----CcEEEEeCC
Q psy2671 463 INC-VEFSPDGRIIASASF-DK----SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD----STLKVWNMK 532 (573)
Q Consensus 463 v~~-v~~sp~g~~las~s~-dg----~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D----~~v~vwd~~ 532 (573)
+.. ++|+|+|+.|+.++. ++ .|..||..+++ ...+. |...+.+++|||||++|+.++.+ +.|++||+.
T Consensus 357 v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~ 434 (706)
T 2z3z_A 357 VTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIG 434 (706)
T ss_dssp EEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESS
T ss_pred EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECC
Confidence 876 799999998766554 44 67777877765 33443 56678999999999998876543 459999998
Q ss_pred ccc
Q psy2671 533 TKK 535 (573)
Q Consensus 533 ~~~ 535 (573)
+++
T Consensus 435 ~~~ 437 (706)
T 2z3z_A 435 KGS 437 (706)
T ss_dssp SCE
T ss_pred CCe
Confidence 876
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=1e-23 Score=227.84 Aligned_cols=310 Identities=14% Similarity=0.145 Sum_probs=214.7
Q ss_pred EEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee-EEecCCC-----------------CcEEEEEEcCCCCeEEEEeeCC
Q psy2671 210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL-FKCEGHK-----------------HWVLCIAWSPDSKQLVSGCKNG 271 (573)
Q Consensus 210 V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~-~~~~~h~-----------------~~V~~v~~s~dg~~l~sgs~dg 271 (573)
+..+.|+ |..+++++.|+ | +||+.+++.+ ..+..|. ..|.+++|||| ++++.+ .++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECC
Confidence 3446777 66778888888 8 9999988762 2222222 46999999999 666555 469
Q ss_pred eEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC-----CeEEEEecCCCcc-----
Q psy2671 272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-----SQCVRVLTSHTRS----- 341 (573)
Q Consensus 272 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-----~~~~~~~~~h~~~----- 341 (573)
.|++||+.+++.. .+..+...+..++|+| ++++++.+ .++.|++||+.+ ++.......+...
T Consensus 102 ~i~~~d~~~~~~~--~l~~~~~~~~~~~~Sp-----dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 173 (706)
T 2z3z_A 102 GLVGFDMLARKVT--YLFDTNEETASLDFSP-----VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQ 173 (706)
T ss_dssp EEEEEETTTTEEE--EEECCTTCCTTCEECT-----TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESS
T ss_pred EEEEEECCCCceE--EccCCcccccCCcCCC-----CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEccc
Confidence 9999999887643 2233445566666665 77888884 689999999988 7766555444443
Q ss_pred ---------EEEEEECCCc-EEEEEe---------------------------------CCCeEEEEeCCCCeeeEecc-
Q psy2671 342 ---------VTCIRWGGSG-LIYSAS---------------------------------QDRTIKVWRASDGVMCRTLE- 377 (573)
Q Consensus 342 ---------v~~~~~~~~~-~l~s~s---------------------------------~d~~i~vw~~~~~~~~~~~~- 377 (573)
+.++.|++++ .|++++ .+..|.+||+.++.......
T Consensus 174 ~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~ 253 (706)
T 2z3z_A 174 AVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG 253 (706)
T ss_dssp CCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC
T ss_pred chhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC
Confidence 4789999988 577666 34678889988876543332
Q ss_pred -CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC-----eEEEEcCCCCcc
Q psy2671 378 -GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF-----TLFLWNPEKEKK 451 (573)
Q Consensus 378 -~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg-----~i~lwd~~~~~~ 451 (573)
.|...+..++++ |+|+.|++++.++ .|++||+.++..
T Consensus 254 ~~~~~~~~~~~~s-------------------------------------pdg~~l~~~~~~~~~~~~~v~~~d~~~g~~ 296 (706)
T 2z3z_A 254 EPKEKFLTNLSWS-------------------------------------PDENILYVAEVNRAQNECKVNAYDAETGRF 296 (706)
T ss_dssp SCTTCEEEEEEEC-------------------------------------TTSSEEEEEEECTTSCEEEEEEEETTTCCE
T ss_pred CCCceeEeeEEEE-------------------------------------CCCCEEEEEEeCCCCCeeEEEEEECCCCce
Confidence 344455555554 6678888877665 899999987622
Q ss_pred ceeeec-cccc---cEEEEEECC--CCCEEEEeeCCCcEEEEeCC-CCeEEEeecCCcceEEE-EEECCCCCEEEEEeC-
Q psy2671 452 SLARMT-GHQQ---LINCVEFSP--DGRIIASASFDKSIKLWDGR-IGKFITTLRGHVQAVYM-VAWSSDSRLLVSGSA- 522 (573)
Q Consensus 452 ~~~~~~-~h~~---~v~~v~~sp--~g~~las~s~dg~i~lwd~~-~~~~~~~~~~h~~~v~~-v~~s~dg~~las~s~- 522 (573)
...... .+.. .+.+++|+| ||+++++++.||.++||+.. .++.+..+..|...+.. ++|+|||+.|+.++.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 297 VRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp EEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred eeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 222111 1221 246789999 99999999999999999875 56777788877777876 799999998776554
Q ss_pred CC----cEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCC----CcEEEcc
Q psy2671 523 DS----TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD----KVLRLWQ 572 (573)
Q Consensus 523 D~----~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d----~~i~iw~ 572 (573)
++ .|..||+.+++ ...+. |...+.+++|||||++|+.+..+ +.|++|+
T Consensus 377 ~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 377 ASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp SCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred CCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence 43 56777777665 33343 66789999999999998876443 4588886
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=4.5e-24 Score=204.18 Aligned_cols=254 Identities=19% Similarity=0.259 Sum_probs=180.9
Q ss_pred EEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC-CceecccccCC-cccEEEEEec
Q psy2671 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST-GKQIGQPMRGH-KQWITALSWE 301 (573)
Q Consensus 224 s~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~-~~~~~~~~~~h-~~~v~~~~~~ 301 (573)
+++.|++|++||+.+++.. .+..|...|.+++|+|||++|++++ ++.|++||+.+ ++.. ....++ ...+.++.|.
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE-KVDTGFATICNNDHGIS 93 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE-ECCCTTCCCBCSCCEEC
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce-EeccccccccccceEEC
Confidence 4467899999999988765 4456788899999999999999876 88999999988 7654 233344 3567777776
Q ss_pred ccccCCCCCEEEEEe--CCCcEEEEEC--CCCeEEEEecCCCccEEEEEECCCc-E-EEEEeCCCeEEEEeCCCCeeeEe
Q psy2671 302 PFHLNHQCRRFASSG--KDGAIRIWDV--ILSQCVRVLTSHTRSVTCIRWGGSG-L-IYSASQDRTIKVWRASDGVMCRT 375 (573)
Q Consensus 302 ~~~~~~~~~~l~s~~--~dg~v~iwd~--~~~~~~~~~~~h~~~v~~~~~~~~~-~-l~s~s~d~~i~vw~~~~~~~~~~ 375 (573)
| +++++++++ .++..++|.+ ..+. ...+..+. .+.+++|++++ . +++++.++.+++|++
T Consensus 94 p-----dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~-------- 158 (297)
T 2ojh_A 94 P-----DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSM-------- 158 (297)
T ss_dssp T-----TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEE--------
T ss_pred C-----CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEE--------
Confidence 6 677888888 3345555543 3333 22333322 25566666554 2 224555555555543
Q ss_pred ccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceee
Q psy2671 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR 455 (573)
Q Consensus 376 ~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~ 455 (573)
.........
T Consensus 159 -----------------------------------------------------------------------~~~~~~~~~ 167 (297)
T 2ojh_A 159 -----------------------------------------------------------------------DIDSGVETR 167 (297)
T ss_dssp -----------------------------------------------------------------------ETTTCCEEE
T ss_pred -----------------------------------------------------------------------ECCCCcceE
Confidence 211111233
Q ss_pred eccccccEEEEEECCCCCEEEEee-CCCcEEEEeCC-CCeEEEeecCCcceEEEEEECCCCCEEEEEeCC----------
Q psy2671 456 MTGHQQLINCVEFSPDGRIIASAS-FDKSIKLWDGR-IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD---------- 523 (573)
Q Consensus 456 ~~~h~~~v~~v~~sp~g~~las~s-~dg~i~lwd~~-~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D---------- 523 (573)
+..+...+.+++|+|+|+.|+.++ .++.+++|+.. .+..+..+..|...+..++|+|||++|++++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 247 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDL 247 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSE
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccC
Confidence 444566789999999999888766 58999999875 455667788888889999999999999988766
Q ss_pred -CcEEEEeCCcccc--cccccCcCCCEEEEEEccCCCEEEEeeCCC
Q psy2671 524 -STLKVWNMKTKKI--EQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566 (573)
Q Consensus 524 -~~v~vwd~~~~~~--~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~ 566 (573)
+.|++||+.+++. +..+.+|...+..+.|+||+++|++++.|.
T Consensus 248 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 248 DVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred ceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999988765 334457888899999999999999887664
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=9.4e-24 Score=228.84 Aligned_cols=310 Identities=15% Similarity=0.163 Sum_probs=212.4
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCC---cEEEEEEcCCCCeEEEEeeC---------CeEEEE
Q psy2671 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKH---WVLCIAWSPDSKQLVSGCKN---------GVIHAW 276 (573)
Q Consensus 209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~---~V~~v~~s~dg~~l~sgs~d---------g~i~vw 276 (573)
.+.+++|+|||+++++ +.|++|++||+.+++....+.+|.. .|.+++|||||++|++++.+ +.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 3567899999998776 7899999999999887777777765 48999999999999998774 788999
Q ss_pred ECCCCcee-cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE-------------
Q psy2671 277 DSSTGKQI-GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV------------- 342 (573)
Q Consensus 277 d~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v------------- 342 (573)
|+.+++.. .....+|...+..++|+| +++.++.++. +.|++||+.+++..+....+...+
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SP-----dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee 170 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGP-----KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEE 170 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCS-----STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHT
T ss_pred ECCCCceEeccCCccccccccccEECC-----CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEE
Confidence 99988642 112234444566666665 7888998876 799999999887776655544333
Q ss_pred -----EEEEECCCc-EEEEEeC-CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhh
Q psy2671 343 -----TCIRWGGSG-LIYSASQ-DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS 415 (573)
Q Consensus 343 -----~~~~~~~~~-~l~s~s~-d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (573)
.++.|++++ .|+.++. ++.+++|++.... ..+...+..+.+.
T Consensus 171 ~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-------------------------- 219 (723)
T 1xfd_A 171 ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYT-----GSIYPTVKPYHYP-------------------------- 219 (723)
T ss_dssp TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCS-----SSSSCCCEEEECC--------------------------
T ss_pred eccCcceEEECCCCCEEEEEEECCCccceEEeeccC-----CcCCCcceeccCC--------------------------
Confidence 789999998 5666654 4566777653211 0011112222221
Q ss_pred hhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc------ccccEEEEEECCCCCEEEEeeC----CCcEE
Q psy2671 416 KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG------HQQLINCVEFSPDGRIIASASF----DKSIK 485 (573)
Q Consensus 416 ~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~------h~~~v~~v~~sp~g~~las~s~----dg~i~ 485 (573)
+.|.. ..+.++++||+.+... ...+.. +...+..++|||||++|++.+. +..|+
T Consensus 220 -----------~~G~~----~~~~~l~~~d~~~~~~-~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~ 283 (723)
T 1xfd_A 220 -----------KAGSE----NPSISLHVIGLNGPTH-DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILT 283 (723)
T ss_dssp -----------BTTSC----CCEEEEEEEESSSSCC-CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEE
T ss_pred -----------CCCCC----CCeeEEEEEECCCCce-eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEE
Confidence 12221 2235789999876542 223333 3567899999999999877653 35799
Q ss_pred EEeCCCCeEEEeecC-CcceEE----EEEECCCCCEEEE--EeCCC------cEEEEe-CCccc--ccccccCcCCCEEE
Q psy2671 486 LWDGRIGKFITTLRG-HVQAVY----MVAWSSDSRLLVS--GSADS------TLKVWN-MKTKK--IEQDLPGHGDEVYA 549 (573)
Q Consensus 486 lwd~~~~~~~~~~~~-h~~~v~----~v~~s~dg~~las--~s~D~------~v~vwd-~~~~~--~~~~l~~h~~~v~~ 549 (573)
+||+.+++....+.. +...+. .++|||||+.|+. +..|+ .|.+|| ..+++ +...+..+...+..
T Consensus 284 ~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~ 363 (723)
T 1xfd_A 284 LCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTK 363 (723)
T ss_dssp EEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEE
T ss_pred EEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEe
Confidence 999999887665543 233332 7899999998775 45666 467777 34444 14555544445554
Q ss_pred -EEEccCCCEEEEeeCC---CcEEEcc
Q psy2671 550 -VDWAPDGEKVASGGKD---KVLRLWQ 572 (573)
Q Consensus 550 -~~~s~d~~~l~s~~~d---~~i~iw~ 572 (573)
+.|+|||+.|+..+.+ +.++||+
T Consensus 364 ~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 364 ILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp EEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred eeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 6999999999866655 7788885
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=1.3e-23 Score=201.07 Aligned_cols=232 Identities=20% Similarity=0.215 Sum_probs=165.2
Q ss_pred CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC-CeeeEEecCC-CCcEEEEEEcCCCCeEEEEee--CC--eEEEEEC
Q psy2671 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-QTPLFKCEGH-KHWVLCIAWSPDSKQLVSGCK--NG--VIHAWDS 278 (573)
Q Consensus 205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~-~~~~~~~~~h-~~~V~~v~~s~dg~~l~sgs~--dg--~i~vwd~ 278 (573)
.|...|.+++|+|+|++|++++ ++.|.+||+.+ ++......+| ...+.+++|+|||++|++++. ++ .|..|+.
T Consensus 39 ~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 39 QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEET
T ss_pred cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEEC
Confidence 3677899999999999999987 78999999998 7766655565 367899999999999999983 34 4555555
Q ss_pred CCCceecccccCCcccEEEEEecccccCCCCCEEE-EEeCCCcEEEEECCC-CeEEEEecCCCccEEEEEECCCc-EEEE
Q psy2671 279 STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFA-SSGKDGAIRIWDVIL-SQCVRVLTSHTRSVTCIRWGGSG-LIYS 355 (573)
Q Consensus 279 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~-~l~s 355 (573)
.++.. ..+..+. .+..+.|.| +++.++ +++.++.+++|++.. ......+..|...+.++.|++++ .++.
T Consensus 118 ~~~~~--~~~~~~~-~~~~~~~sp-----dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 189 (297)
T 2ojh_A 118 TGGTP--RLMTKNL-PSYWHGWSP-----DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYF 189 (297)
T ss_dssp TCCCC--EECCSSS-SEEEEEECT-----TSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEE
T ss_pred CCCce--EEeecCC-CccceEECC-----CCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEE
Confidence 55442 2233332 377778766 566666 788899999998532 23345566677777888887766 3433
Q ss_pred Ee-CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE
Q psy2671 356 AS-QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS 434 (573)
Q Consensus 356 ~s-~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 434 (573)
++ .++.+++|++.
T Consensus 190 ~~~~~~~~~i~~~~------------------------------------------------------------------ 203 (297)
T 2ojh_A 190 NSSRTGQMQIWRVR------------------------------------------------------------------ 203 (297)
T ss_dssp EECTTSSCEEEEEE------------------------------------------------------------------
T ss_pred EecCCCCccEEEEC------------------------------------------------------------------
Confidence 33 46666666542
Q ss_pred EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC-----------CcEEEEeCCCCeE--EEeecCC
Q psy2671 435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD-----------KSIKLWDGRIGKF--ITTLRGH 501 (573)
Q Consensus 435 g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d-----------g~i~lwd~~~~~~--~~~~~~h 501 (573)
........+..|...+.+++|+|+|++|++++.+ +.|.+||..+++. +..+.+|
T Consensus 204 -------------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 270 (297)
T 2ojh_A 204 -------------VDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGG 270 (297)
T ss_dssp -------------TTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEES
T ss_pred -------------CCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCC
Confidence 1111122334455568889999999999988766 5699999988765 4445577
Q ss_pred cceEEEEEECCCCCEEEEEeCCC
Q psy2671 502 VQAVYMVAWSSDSRLLVSGSADS 524 (573)
Q Consensus 502 ~~~v~~v~~s~dg~~las~s~D~ 524 (573)
...+.+++|+|||++|++++.|.
T Consensus 271 ~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 271 QGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTTSCSCCBCTTSSEEEEEEECC
T ss_pred CcccccceECCCCCEEEEEEecc
Confidence 78889999999999999887654
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=2.1e-22 Score=196.47 Aligned_cols=275 Identities=8% Similarity=0.075 Sum_probs=190.3
Q ss_pred EEcCCCCe-EEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee-CCeEEEEECCCCceecccccCC
Q psy2671 214 KFSPNGRS-LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK-NGVIHAWDSSTGKQIGQPMRGH 291 (573)
Q Consensus 214 ~fsp~g~~-las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~-dg~i~vwd~~~~~~~~~~~~~h 291 (573)
.|.+++.+ +++++.+++|.+||..+++.+.....+...+ +++|+|||+++++++. ++.|.+||+.+++........+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 46665555 6788889999999999998877777666667 9999999998777666 8899999999887522333344
Q ss_pred cccEEEEEecccccCCCCCEEEEEeCCC---cEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEE-EeCCCe-EEEE
Q psy2671 292 KQWITALSWEPFHLNHQCRRFASSGKDG---AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYS-ASQDRT-IKVW 365 (573)
Q Consensus 292 ~~~v~~~~~~~~~~~~~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s-~s~d~~-i~vw 365 (573)
.....++.|.| ++++++++..++ .|++||+.+++.+..+..+. ...+++|++++ .+++ ...++. +.+|
T Consensus 83 ~~~~~~~~~s~-----dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~i~~~ 156 (331)
T 3u4y_A 83 QSSMADVDITP-----DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY-DAVGIAISPNGNGLILIDRSSANTVRRF 156 (331)
T ss_dssp SSCCCCEEECT-----TSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT-TEEEEEECTTSSCEEEEEETTTTEEEEE
T ss_pred CCCccceEECC-----CCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC-CccceEECCCCCEEEEEecCCCceEEEE
Confidence 44443366654 677777554442 89999999888877765543 45788898887 3444 455577 8888
Q ss_pred eCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEc
Q psy2671 366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN 445 (573)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd 445 (573)
++..........
T Consensus 157 ~~~~~g~~~~~~-------------------------------------------------------------------- 168 (331)
T 3u4y_A 157 KIDADGVLFDTG-------------------------------------------------------------------- 168 (331)
T ss_dssp EECTTCCEEEEE--------------------------------------------------------------------
T ss_pred EECCCCcEeecC--------------------------------------------------------------------
Confidence 865321110000
Q ss_pred CCCCccceeeeccccccEEEEEECCCCCEEE-EeeCCCcEEEEeCCCCeE---EEeecCCcceEEEEEECCCCCEEEEEe
Q psy2671 446 PEKEKKSLARMTGHQQLINCVEFSPDGRIIA-SASFDKSIKLWDGRIGKF---ITTLRGHVQAVYMVAWSSDSRLLVSGS 521 (573)
Q Consensus 446 ~~~~~~~~~~~~~h~~~v~~v~~sp~g~~la-s~s~dg~i~lwd~~~~~~---~~~~~~h~~~v~~v~~s~dg~~las~s 521 (573)
............++|+|+|++++ ++..++.|++||..+++. +..+..+ ..+..++|+|||++|+.++
T Consensus 169 --------~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 169 --------QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp --------EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEEC
T ss_pred --------CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEE
Confidence 00001123367899999999655 455789999999999887 7777654 4567899999999776554
Q ss_pred -CCCcEEEEeCCcccc--cccccCc----CC---CEEEEEEccCCCEEEEeeC-CCcEEEcc
Q psy2671 522 -ADSTLKVWNMKTKKI--EQDLPGH----GD---EVYAVDWAPDGEKVASGGK-DKVLRLWQ 572 (573)
Q Consensus 522 -~D~~v~vwd~~~~~~--~~~l~~h----~~---~v~~~~~s~d~~~l~s~~~-d~~i~iw~ 572 (573)
.++.|.+||+.+++. +..+..+ .. ....++|+||+++|+.++. ++.|++|+
T Consensus 240 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d 301 (331)
T 3u4y_A 240 ESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFT 301 (331)
T ss_dssp SSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEE
Confidence 578899999998876 2222211 11 2355899999999866554 56999997
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=3.3e-22 Score=194.97 Aligned_cols=279 Identities=11% Similarity=0.121 Sum_probs=182.9
Q ss_pred EEcCCCC-eeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEee
Q psy2671 117 KFSPNGR-SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRP 195 (573)
Q Consensus 117 ~~s~~~~-~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (573)
.|.++++ .+++++.+++|++||..+++.+..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~------------------------------------------------ 35 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQ------------------------------------------------ 35 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEE------------------------------------------------
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeee------------------------------------------------
Confidence 4555554 578888999999999988764321
Q ss_pred ccccccCCCCCCCcEEEEEEcCCCCeEEEEeC-CCeEEEEECCCCee-eEEecCCCCcEEEEEEcCCCCeEEEEeeCC--
Q psy2671 196 VTRCTSSMPGHAEAVISVKFSPNGRSLASGSG-DTTVRFWDVTTQTP-LFKCEGHKHWVLCIAWSPDSKQLVSGCKNG-- 271 (573)
Q Consensus 196 ~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~-d~~i~iwd~~~~~~-~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg-- 271 (573)
...+...+ +++|+|+|+++++++. ++.|.+||+.+++. ......+.....+++|+|||++|+++..++
T Consensus 36 -------~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 107 (331)
T 3u4y_A 36 -------ITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHP 107 (331)
T ss_dssp -------EECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSS
T ss_pred -------EEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCc
Confidence 11234456 9999999997766665 89999999999887 666666666666699999999999665553
Q ss_pred -eEEEEECCCCceecccccCCcccEEEEEecccccCCCCC-EEEEEeCCCc-EEEEECCCCeEE----EEecCCCccEEE
Q psy2671 272 -VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCR-RFASSGKDGA-IRIWDVILSQCV----RVLTSHTRSVTC 344 (573)
Q Consensus 272 -~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~-~l~s~~~dg~-v~iwd~~~~~~~----~~~~~h~~~v~~ 344 (573)
.|.+||+.+++.+.. +.. .....+++|.| +++ .+++...++. +++|++.....+ ............
T Consensus 108 ~~i~v~d~~~~~~~~~-~~~-~~~~~~~~~sp-----dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~ 180 (331)
T 3u4y_A 108 FNMQSYSFLKNKFIST-IPI-PYDAVGIAISP-----NGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFN 180 (331)
T ss_dssp CEEEEEETTTTEEEEE-EEC-CTTEEEEEECT-----TSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEE
T ss_pred ccEEEEECCCCCeEEE-EEC-CCCccceEECC-----CCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccc
Confidence 999999998876533 222 23457788776 555 4555566688 999998653322 111122334566
Q ss_pred EEECCCc-EEEE-EeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671 345 IRWGGSG-LIYS-ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY 422 (573)
Q Consensus 345 ~~~~~~~-~l~s-~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (573)
++|++++ .++. +..++.|.+||+.++....
T Consensus 181 ~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~------------------------------------------------ 212 (331)
T 3u4y_A 181 ITFTPDGNFAFVANLIGNSIGILETQNPENIT------------------------------------------------ 212 (331)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEECSSTTSCE------------------------------------------------
T ss_pred eEECCCCCEEEEEeCCCCeEEEEECCCCcccc------------------------------------------------
Confidence 7776665 2333 3345666666655432200
Q ss_pred eeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCeE--EEeec
Q psy2671 423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRIGKF--ITTLR 499 (573)
Q Consensus 423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~~~~--~~~~~ 499 (573)
....+.. ...+..++|+|||++++++ ..++.|.+||..+++. +..+.
T Consensus 213 -----------------------------~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~ 262 (331)
T 3u4y_A 213 -----------------------------LLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFG 262 (331)
T ss_dssp -----------------------------EEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred -----------------------------eeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccc
Confidence 0111111 2345678999999976655 4578899999998876 33332
Q ss_pred CC----cc---eEEEEEECCCCCEEEEEe-CCCcEEEEeCCcccc
Q psy2671 500 GH----VQ---AVYMVAWSSDSRLLVSGS-ADSTLKVWNMKTKKI 536 (573)
Q Consensus 500 ~h----~~---~v~~v~~s~dg~~las~s-~D~~v~vwd~~~~~~ 536 (573)
.+ .. ....++|+|||++|++++ .++.|++||+.....
T Consensus 263 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 263 HGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp CCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred cccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 22 12 224589999999886655 466999999977543
No 143
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.91 E-value=2.7e-23 Score=225.04 Aligned_cols=319 Identities=12% Similarity=0.107 Sum_probs=215.3
Q ss_pred EEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEe
Q psy2671 115 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVR 194 (573)
Q Consensus 115 ~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (573)
+++|+|||++++++ .|++|++||+.++++...
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~----------------------------------------------- 51 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTI----------------------------------------------- 51 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEE-----------------------------------------------
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEE-----------------------------------------------
Confidence 66899999766655 699999999988764311
Q ss_pred eccccccCCCCCCC---cEEEEEEcCCCCeEEEEeC---------CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671 195 PVTRCTSSMPGHAE---AVISVKFSPNGRSLASGSG---------DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262 (573)
Q Consensus 195 ~~~~~~~~~~gh~~---~V~~~~fsp~g~~las~s~---------d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~ 262 (573)
+.+|.. .+.+++|||||++||+++. |++|++||+.+++.+.. ..-...+.+++|||||+
T Consensus 52 --------~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~-~~l~~~~~~~~~SPDG~ 122 (719)
T 1z68_A 52 --------LSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG-NELPRPIQYLCWSPVGS 122 (719)
T ss_dssp --------ECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-SCCCSSBCCEEECSSTT
T ss_pred --------EccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc-eecCcccccceECCCCC
Confidence 011211 3779999999999998876 78999999999876211 11124588899999999
Q ss_pred eEEEEeeCCeEEEEECCCCceecccccCCcccE-----------------EEEEecccccCCCCCEEEEEeCCC------
Q psy2671 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWI-----------------TALSWEPFHLNHQCRRFASSGKDG------ 319 (573)
Q Consensus 263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v-----------------~~~~~~~~~~~~~~~~l~s~~~dg------ 319 (573)
+|+++. ++.|++|++.+++.......++...| .++.|+| ++++|++++.|.
T Consensus 123 ~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-----DG~~la~~~~d~~~~~~~ 196 (719)
T 1z68_A 123 KLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-----NGKFLAYAEFNDTDIPVI 196 (719)
T ss_dssp CEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-----TSSEEEEEEEECTTSCEE
T ss_pred EEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-----CCCEEEEEEECCCCCceE
Confidence 999875 78999999988765432223333322 3677766 788899887552
Q ss_pred ----------------------------cEEEEECCCCeEE---E-----EecCCCccEEEEEECCCcEEE-EEeCC---
Q psy2671 320 ----------------------------AIRIWDVILSQCV---R-----VLTSHTRSVTCIRWGGSGLIY-SASQD--- 359 (573)
Q Consensus 320 ----------------------------~v~iwd~~~~~~~---~-----~~~~h~~~v~~~~~~~~~~l~-s~s~d--- 359 (573)
.|++||+.+++.. . .+.+|...+..++|++++.++ +....
T Consensus 197 ~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~ 276 (719)
T 1z68_A 197 AYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQN 276 (719)
T ss_dssp EEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTT
T ss_pred EeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccC
Confidence 7889999877642 2 234688889999999998544 43322
Q ss_pred -CeEEEEe----CCCCeeeEec----cCCcceee-----EEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671 360 -RTIKVWR----ASDGVMCRTL----EGHAHWVN-----TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ 425 (573)
Q Consensus 360 -~~i~vw~----~~~~~~~~~~----~~~~~~v~-----~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (573)
..|.+|| ..++.....+ .+|..++. .++ +
T Consensus 277 ~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~ 319 (719)
T 1z68_A 277 VSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPV-------------------------------------F 319 (719)
T ss_dssp EEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCE-------------------------------------E
T ss_pred eEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccE-------------------------------------E
Confidence 2488888 7776654444 34444443 223 3
Q ss_pred CCCCcEEEE--EeCCC--eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC-----CcEEEEeCCC--Ce-
Q psy2671 426 CPEGEKLVS--GSDDF--TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD-----KSIKLWDGRI--GK- 493 (573)
Q Consensus 426 ~~~~~~l~s--g~~dg--~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d-----g~i~lwd~~~--~~- 493 (573)
+|+|+.++. ...+| .|.+||+.++. ...+..+...+..+.++ +++.|+..+.+ +..++|.+.. +.
T Consensus 320 spdg~~l~~~~~~~~g~~~l~~~~~~~~~--~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~ 396 (719)
T 1z68_A 320 SYDAISYYKIFSDKDGYKHIHYIKDTVEN--AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPP 396 (719)
T ss_dssp CTTSSCEEEEEECTTSCEEEEEESSCSTT--CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSC
T ss_pred CCCCCeEEEEEEccCCceEEEEEECCCCc--eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCC
Confidence 466765443 44555 57777876543 34555556667888877 88877766654 8889997653 32
Q ss_pred EEEeec----CCcceEEEEEECCCCCEEEE-EeCC--CcEEEEeCCcccc
Q psy2671 494 FITTLR----GHVQAVYMVAWSSDSRLLVS-GSAD--STLKVWNMKTKKI 536 (573)
Q Consensus 494 ~~~~~~----~h~~~v~~v~~s~dg~~las-~s~D--~~v~vwd~~~~~~ 536 (573)
....+. +|...+..+.|+||+++++. ++.+ ..+.+||+.+++.
T Consensus 397 ~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~ 446 (719)
T 1z68_A 397 SKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQE 446 (719)
T ss_dssp CEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCE
T ss_pred CceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCE
Confidence 123332 36667888999999998774 3333 4688999877664
No 144
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=1.6e-21 Score=191.85 Aligned_cols=273 Identities=13% Similarity=0.120 Sum_probs=200.1
Q ss_pred CcEEEEEEcCCCCeEEEEeC-------CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE-eeCCeEEEEECC
Q psy2671 208 EAVISVKFSPNGRSLASGSG-------DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG-CKNGVIHAWDSS 279 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las~s~-------d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg-s~dg~i~vwd~~ 279 (573)
..+..++|+|+|+++++++. ++.|.+||..+++.+..+... ..+.+++|+|+|++++.+ ..++.|.+||..
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 46789999999999888774 568999999998877665533 336789999999966554 557999999999
Q ss_pred CCceecccccCCc--------ccEEEEEecccccCCCCCEEEEEe--CCCcEEEEECCCCeEEEEecCCCccEEEEEECC
Q psy2671 280 TGKQIGQPMRGHK--------QWITALSWEPFHLNHQCRRFASSG--KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG 349 (573)
Q Consensus 280 ~~~~~~~~~~~h~--------~~v~~~~~~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~ 349 (573)
+++.+.....++. ..+.++.|.| ++++++.++ .++.|.+||..+++....+..+...+.+++|++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-----dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADD-----ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEET-----TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEET
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECC-----CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECC
Confidence 8876533222111 1266777765 556555554 588999999999988887775555677788877
Q ss_pred Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671 350 SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE 428 (573)
Q Consensus 350 ~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (573)
++ .+++++.++.|.+||..++.....+...
T Consensus 195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~------------------------------------------------- 225 (353)
T 3vgz_A 195 EGKRLYTTNADGELITIDTADNKILSRKKLL------------------------------------------------- 225 (353)
T ss_dssp TTTEEEEECTTSEEEEEETTTTEEEEEEECC-------------------------------------------------
T ss_pred CCCEEEEEcCCCeEEEEECCCCeEEEEEEcC-------------------------------------------------
Confidence 65 5777777888888887665443221100
Q ss_pred CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC-CCcEEEEeCCCCeEEEeecCCcceEEE
Q psy2671 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-DKSIKLWDGRIGKFITTLRGHVQAVYM 507 (573)
Q Consensus 429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~-dg~i~lwd~~~~~~~~~~~~h~~~v~~ 507 (573)
..++...+..++|+|+|+.+++++. ++.|.+||..+++.+..+..... ..
T Consensus 226 ---------------------------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~ 276 (353)
T 3vgz_A 226 ---------------------------DDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LA 276 (353)
T ss_dssp ---------------------------CSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CC
T ss_pred ---------------------------CCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ce
Confidence 0012345778999999997776654 59999999999988877764432 56
Q ss_pred EEECCCCCEEEEEe-CCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCC
Q psy2671 508 VAWSSDSRLLVSGS-ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565 (573)
Q Consensus 508 v~~s~dg~~las~s-~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d 565 (573)
++|+|||+++++++ .++.|.+||+.+++.+..+..+ ..+.+++|+|||++|+.+..+
T Consensus 277 ~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 277 VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred EEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 89999999665555 6899999999999887776644 468899999999977665544
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=4.2e-22 Score=194.50 Aligned_cols=285 Identities=12% Similarity=0.110 Sum_probs=198.0
Q ss_pred CeEEEEeCCCeEEEEECCCCeeeEEecCCC-C-cEEEEEEcCCCCeEE-EEeeCCeEEEEECCCCceecccccCC----c
Q psy2671 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHK-H-WVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGKQIGQPMRGH----K 292 (573)
Q Consensus 220 ~~las~s~d~~i~iwd~~~~~~~~~~~~h~-~-~V~~v~~s~dg~~l~-sgs~dg~i~vwd~~~~~~~~~~~~~h----~ 292 (573)
+++++++.+++|.+||+.+++.+..+.... . .+.+++|+|||++++ +++.++.|.+||+.+++.+.....++ .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 468999999999999999998877665322 2 378899999998765 55567899999999887653322222 1
Q ss_pred ccEEEEEecccccCCCCCEEEEEe------------CCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCC
Q psy2671 293 QWITALSWEPFHLNHQCRRFASSG------------KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQD 359 (573)
Q Consensus 293 ~~v~~~~~~~~~~~~~~~~l~s~~------------~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d 359 (573)
..+..+.|.| +++++++++ .++.|++||+.+++....+.. ...+.+++|++++ .++++ +
T Consensus 82 ~~~~~~~~s~-----dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~ 153 (337)
T 1pby_B 82 KSLFGAALSP-----DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--G 153 (337)
T ss_dssp ECTTCEEECT-----TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--S
T ss_pred ccccceEECC-----CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--C
Confidence 2344555554 677777775 579999999998887776654 3457788899887 46666 6
Q ss_pred CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcE----EEEE
Q psy2671 360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK----LVSG 435 (573)
Q Consensus 360 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~sg 435 (573)
+.|.+||+.++.....+..+... ..+.++++....... ...+.. ...+
T Consensus 154 ~~i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~---------------------------~~~~~~~~~~~~~~ 205 (337)
T 1pby_B 154 RDLHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQ---------------------------HESSGVMATPFYTA 205 (337)
T ss_dssp SSEEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCC---------------------------CTTTTEEEEEEEEE
T ss_pred CeEEEEECCCCcEeeeeeccccC-CCceeCCCccEEeee---------------------------ccCCCceeeeeecc
Confidence 89999999988776555433200 001122221100000 000000 1111
Q ss_pred eCCC----------eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceE
Q psy2671 436 SDDF----------TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505 (573)
Q Consensus 436 ~~dg----------~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v 505 (573)
..++ .+.+||+.+.......+..+...+.+++|+|+|++++++ ++.|.+||..+++.+..+..+ ..+
T Consensus 206 ~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~ 282 (337)
T 1pby_B 206 RKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSY 282 (337)
T ss_dssp BTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCC
T ss_pred ccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-Cce
Confidence 1112 688999887654433344556678899999999999988 799999999999888777644 356
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCc
Q psy2671 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543 (573)
Q Consensus 506 ~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h 543 (573)
.+++|+|||++|++++.++.|++||+.+++.+..+..+
T Consensus 283 ~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 283 YSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp CEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred eeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 78999999999999999999999999998877666544
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=4.3e-22 Score=194.99 Aligned_cols=290 Identities=11% Similarity=0.101 Sum_probs=189.5
Q ss_pred EEEEeCCCeEEEEECC-CCe-eeEEecCCCCcEEEEEEcCCCCeEEEEeeC-CeEEEEECC--CCceec-ccccCCcccE
Q psy2671 222 LASGSGDTTVRFWDVT-TQT-PLFKCEGHKHWVLCIAWSPDSKQLVSGCKN-GVIHAWDSS--TGKQIG-QPMRGHKQWI 295 (573)
Q Consensus 222 las~s~d~~i~iwd~~-~~~-~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d-g~i~vwd~~--~~~~~~-~~~~~h~~~v 295 (573)
+++++.|+.|++||+. +++ .......|...+.+++|+|+|++|++++.+ +.|.+|++. ++.... ..+..+. .+
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~ 86 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SL 86 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CC
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CC
Confidence 4455789999999985 332 122223466678999999999999998887 999999987 554221 1122222 56
Q ss_pred EEEEecccccCCCCCEEEEEe-CCCcEEEEECC---CCeEEEEecCCCccEEEEEECCCc-EEEEEe-CCCeEEEEeCCC
Q psy2671 296 TALSWEPFHLNHQCRRFASSG-KDGAIRIWDVI---LSQCVRVLTSHTRSVTCIRWGGSG-LIYSAS-QDRTIKVWRASD 369 (573)
Q Consensus 296 ~~~~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~---~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s-~d~~i~vw~~~~ 369 (573)
..++|.| +++++++++ .++.|++||+. ..+....+..+ ..+.+++|++++ .+++++ .++.|.+|++.+
T Consensus 87 ~~~~~s~-----dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 87 THISTDH-----QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp SEEEECT-----TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cEEEEcC-----CCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 6777765 566666555 48899999993 33444444443 357889999887 577776 899999999986
Q ss_pred -CeeeEe----ccCC-cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEE-eCCCeEE
Q psy2671 370 -GVMCRT----LEGH-AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG-SDDFTLF 442 (573)
Q Consensus 370 -~~~~~~----~~~~-~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg-~~dg~i~ 442 (573)
+..... ...+ ...+..+ .++|++++++.+ ..++.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~pdg~~l~~~~~~~~~i~ 203 (343)
T 1ri6_A 161 DGHLVAQDPAEVTTVEGAGPRHM-------------------------------------VFHPNEQYAYCVNELNSSVD 203 (343)
T ss_dssp TSCEEEEEEEEEECSTTCCEEEE-------------------------------------EECTTSSEEEEEETTTTEEE
T ss_pred CCceeeecccccccCCCCCcceE-------------------------------------EECCCCCEEEEEeCCCCEEE
Confidence 543211 1111 1112222 234677766544 5889999
Q ss_pred EEcCCC--Cccc-eeeec----cc--cccEEEEEECCCCCEEE-EeeCCCcEEEEeCC--C--CeEEEeecCCcceEEEE
Q psy2671 443 LWNPEK--EKKS-LARMT----GH--QQLINCVEFSPDGRIIA-SASFDKSIKLWDGR--I--GKFITTLRGHVQAVYMV 508 (573)
Q Consensus 443 lwd~~~--~~~~-~~~~~----~h--~~~v~~v~~sp~g~~la-s~s~dg~i~lwd~~--~--~~~~~~~~~h~~~v~~v 508 (573)
+|++.. +... ..... ++ ...+..++|+|+|++|+ ++..++.|++||.. + .+.+..+..+.. +..+
T Consensus 204 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~ 282 (343)
T 1ri6_A 204 VWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGF 282 (343)
T ss_dssp EEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCE
T ss_pred EEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceE
Confidence 999854 2111 11111 11 23567899999998877 45579999999987 3 344555555444 7889
Q ss_pred EECCCCCEEEEEe-CCCcEEEEeC--Ccccc--cccccCcCCCEEEEEEccCCC
Q psy2671 509 AWSSDSRLLVSGS-ADSTLKVWNM--KTKKI--EQDLPGHGDEVYAVDWAPDGE 557 (573)
Q Consensus 509 ~~s~dg~~las~s-~D~~v~vwd~--~~~~~--~~~l~~h~~~v~~~~~s~d~~ 557 (573)
+|+|||++|++++ .++.|.+|++ .+++. +..+... ....+++|.|+.+
T Consensus 283 ~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 283 NVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVVNAHEG 335 (343)
T ss_dssp EECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEEEEEC-
T ss_pred EECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEEEcccC
Confidence 9999999888887 6899999955 45533 3334332 3455777877654
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=1e-22 Score=214.66 Aligned_cols=267 Identities=13% Similarity=0.058 Sum_probs=178.8
Q ss_pred CCcEEEEEEcCCCCeEEEEeC-CCeEEEEECCCCeeeEEecCCC-CcEEEEEEcCCCCeEEEEee---CCeEEEEECCC-
Q psy2671 207 AEAVISVKFSPNGRSLASGSG-DTTVRFWDVTTQTPLFKCEGHK-HWVLCIAWSPDSKQLVSGCK---NGVIHAWDSST- 280 (573)
Q Consensus 207 ~~~V~~~~fsp~g~~las~s~-d~~i~iwd~~~~~~~~~~~~h~-~~V~~v~~s~dg~~l~sgs~---dg~i~vwd~~~- 280 (573)
..+|.+++|+|||++||+++. |++++||++.+++.. .+..|. ..+.+++|||| +.+++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 457999999999999999887 999999999776654 444444 68999999999 77777765 44455654432
Q ss_pred --CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeC
Q psy2671 281 --GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ 358 (573)
Q Consensus 281 --~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~ 358 (573)
+... .....+. +...+|.|. .++..+++++.+ .+.+||+
T Consensus 99 ~~g~~~-~l~~~~~--~~~~~~s~d---g~~~~~~s~~~~-~~~l~d~-------------------------------- 139 (582)
T 3o4h_A 99 RPGEEQ-RLEAVKP--MRILSGVDT---GEAVVFTGATED-RVALYAL-------------------------------- 139 (582)
T ss_dssp STTCCE-ECTTSCS--BEEEEEEEC---SSCEEEEEECSS-CEEEEEE--------------------------------
T ss_pred CCCccc-cccCCCC--ceeeeeCCC---CCeEEEEecCCC-CceEEEc--------------------------------
Confidence 2111 1111111 112233221 111122222222 2235544
Q ss_pred CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD 438 (573)
Q Consensus 359 d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 438 (573)
.++........+. ..++ .+|+|+.+++++.+
T Consensus 140 ---------~~g~~~~l~~~~~---~~~~-------------------------------------~spDG~~la~~~~~ 170 (582)
T 3o4h_A 140 ---------DGGGLRELARLPG---FGFV-------------------------------------SDIRGDLIAGLGFF 170 (582)
T ss_dssp ---------ETTEEEEEEEESS---CEEE-------------------------------------EEEETTEEEEEEEE
T ss_pred ---------cCCcEEEeecCCC---ceEE-------------------------------------ECCCCCEEEEEEEc
Confidence 4333221111110 1122 22567777776666
Q ss_pred ----CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCC--cEEEEeCCCCeEEEeecCCcceEEEEE---
Q psy2671 439 ----FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK--SIKLWDGRIGKFITTLRGHVQAVYMVA--- 509 (573)
Q Consensus 439 ----g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg--~i~lwd~~~~~~~~~~~~h~~~v~~v~--- 509 (573)
+.|++||+.++. ...+.+|...+..++|||||+.|+++..++ .|++||..+++.. .+.+|...+..++
T Consensus 171 ~~~~~~i~~~d~~~g~--~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~ 247 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGG--LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTA 247 (582)
T ss_dssp ETTEEEEEEEETTTCC--CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSE
T ss_pred CCCCeEEEEEcCCCCC--ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcc
Confidence 678888877654 335677888899999999999999888888 8999999998877 7777776666666
Q ss_pred -----ECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCc---EEEcc
Q psy2671 510 -----WSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV---LRLWQ 572 (573)
Q Consensus 510 -----~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~---i~iw~ 572 (573)
|||||.++++++.|+++++|++ ++... .+.+.|.+++|+ |++.+++++.+.+ +++|+
T Consensus 248 ~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 248 ITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp EEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred ccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 9999999999999999999999 55544 234678999999 9999998888754 55554
No 148
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=5.1e-21 Score=188.22 Aligned_cols=270 Identities=12% Similarity=0.082 Sum_probs=192.1
Q ss_pred cccEEEEEEcCCCCeeEEeeC-------CCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671 110 AEAVISVKFSPNGRSLASGSG-------DTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD 182 (573)
Q Consensus 110 ~~~V~~l~~s~~~~~lat~s~-------D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (573)
...+..++|+|+|+++++++. ++.|.+||..+++.+....
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--------------------------------- 86 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH--------------------------------- 86 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE---------------------------------
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe---------------------------------
Confidence 456788999999998888774 5689999998876442110
Q ss_pred EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEE-EEeCCCeEEEEECCCCeeeEEecCCCC---------cE
Q psy2671 183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKH---------WV 252 (573)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~la-s~s~d~~i~iwd~~~~~~~~~~~~h~~---------~V 252 (573)
+...+.+++|+|+|++++ +...++.|.+||..+++.+..+..+.. .+
T Consensus 87 -----------------------~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (353)
T 3vgz_A 87 -----------------------NDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQP 143 (353)
T ss_dssp -----------------------ESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEE
T ss_pred -----------------------cCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCC
Confidence 012345788999999665 445579999999999988776655432 27
Q ss_pred EEEEEcCCCCeEEEEe--eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe
Q psy2671 253 LCIAWSPDSKQLVSGC--KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ 330 (573)
Q Consensus 253 ~~v~~s~dg~~l~sgs--~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 330 (573)
.+++|+|+|+++++++ .++.|.+||..+++.... +..+...+.++.|.| ++++++.++.++.+.+||..+++
T Consensus 144 ~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~s~-----dg~~l~~~~~~~~i~~~d~~~~~ 217 (353)
T 3vgz_A 144 RELVADDATNTVYISGIGKESVIWVVDGGNIKLKTA-IQNTGKMSTGLALDS-----EGKRLYTTNADGELITIDTADNK 217 (353)
T ss_dssp EEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEE-ECCCCTTCCCCEEET-----TTTEEEEECTTSEEEEEETTTTE
T ss_pred ceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEE-ecCCCCccceEEECC-----CCCEEEEEcCCCeEEEEECCCCe
Confidence 8999999999888776 478999999998876533 232333455566654 67888888999999999999988
Q ss_pred EEEEecC----CCccEEEEEECCCc-EEEEEe-CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCce
Q psy2671 331 CVRVLTS----HTRSVTCIRWGGSG-LIYSAS-QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF 404 (573)
Q Consensus 331 ~~~~~~~----h~~~v~~~~~~~~~-~l~s~s-~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~ 404 (573)
....+.. +...+..++|++++ .++.++ .++.|.+||..++.....+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~---------------------------- 269 (353)
T 3vgz_A 218 ILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKV---------------------------- 269 (353)
T ss_dssp EEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEE----------------------------
T ss_pred EEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE----------------------------
Confidence 7766543 44456677777655 344443 3466777766544322111
Q ss_pred eeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee-CCCc
Q psy2671 405 KYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS-FDKS 483 (573)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s-~dg~ 483 (573)
.... ...++|+|+|+.+++++ .++.
T Consensus 270 ----------------------------------------------------~~~~--~~~~~~s~dg~~l~v~~~~~~~ 295 (353)
T 3vgz_A 270 ----------------------------------------------------AAPE--SLAVLFNPARNEAYVTHRQAGK 295 (353)
T ss_dssp ----------------------------------------------------ECSS--CCCEEEETTTTEEEEEETTTTE
T ss_pred ----------------------------------------------------EcCC--CceEEECCCCCEEEEEECCCCe
Confidence 1111 13589999999665554 7899
Q ss_pred EEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCC
Q psy2671 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524 (573)
Q Consensus 484 i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~ 524 (573)
|.+||..+++.+..+..+ ..+..++|+|||++|+++..++
T Consensus 296 v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 296 VSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEECC
T ss_pred EEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEccc
Confidence 999999999988887654 3678999999999877776553
No 149
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.89 E-value=1.7e-20 Score=203.19 Aligned_cols=347 Identities=11% Similarity=0.100 Sum_probs=216.2
Q ss_pred cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeE
Q psy2671 112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVF 191 (573)
Q Consensus 112 ~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (573)
...+++|+|||++++++ |++|++||+.++++.....+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~----------------------------------------- 54 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLEN----------------------------------------- 54 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECT-----------------------------------------
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEec-----------------------------------------
Confidence 35578999999999996 99999999998865321111
Q ss_pred EEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCC---------CeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671 192 QVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD---------TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262 (573)
Q Consensus 192 ~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d---------~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~ 262 (573)
..+..+......++|||||++|+.++.+ +.+.+||+.+++.. .+..|...+...+|||||+
T Consensus 55 ---------~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~ 124 (740)
T 4a5s_A 55 ---------STFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGH 124 (740)
T ss_dssp ---------TTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTT
T ss_pred ---------hhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCC
Confidence 0111122233457899999999999876 55679999998754 4667778899999999999
Q ss_pred eEEEEeeCCeEEEEECCCCceecccccCCcccEE-----------------EEEecccccCCCCCEEEEEeCCCc-EEEE
Q psy2671 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWIT-----------------ALSWEPFHLNHQCRRFASSGKDGA-IRIW 324 (573)
Q Consensus 263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~-----------------~~~~~~~~~~~~~~~l~s~~~dg~-v~iw 324 (573)
.||.+ .++.|++|++.++....-...++...+. ++.|+| +|+.|+..+.|.+ +++|
T Consensus 125 ~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-----Dg~~la~~~~d~~~v~~~ 198 (740)
T 4a5s_A 125 KLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-----NGTFLAYAQFNDTEVPLI 198 (740)
T ss_dssp CEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-----TSSEEEEEEEECTTCCEE
T ss_pred EEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECC-----CCCEEEEEEEcccCCceE
Confidence 99887 5789999999887654333334433332 366665 7888988775544 8888
Q ss_pred ECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCC---Ce--eeEecc------CCcceeeEEEeccCce
Q psy2671 325 DVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASD---GV--MCRTLE------GHAHWVNTLALSTDYL 393 (573)
Q Consensus 325 d~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~---~~--~~~~~~------~~~~~v~~~~~s~~~~ 393 (573)
++...... ..+...+..+.+...|. .....+|.+||+.+ +. ....+. +|...+..+++++|
T Consensus 199 ~~~~~~~~---~~~~~~~~~~~yp~~G~---~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspd-- 270 (740)
T 4a5s_A 199 EYSFYSDE---SLQYPKTVRVPYPKAGA---VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQ-- 270 (740)
T ss_dssp EEEECCST---TCSSCEEEEEECCBTTS---CCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEET--
T ss_pred EEEeecCC---CCCCCcceeecCCCCcC---cCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCC--
Confidence 75321100 02444556666654431 01223688999988 72 222232 36677777777755
Q ss_pred eEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe----CCCeEEEEcCCCCc----c-ceeee--cccccc
Q psy2671 394 MRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS----DDFTLFLWNPEKEK----K-SLARM--TGHQQL 462 (573)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~----~dg~i~lwd~~~~~----~-~~~~~--~~h~~~ 462 (573)
|+.++... .+..|++||+.++. . ....+ .+|...
T Consensus 271 -----------------------------------g~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~ 315 (740)
T 4a5s_A 271 -----------------------------------ERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGW 315 (740)
T ss_dssp -----------------------------------TEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSC
T ss_pred -----------------------------------CeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCce
Confidence 44333322 23478999987654 1 11111 345444
Q ss_pred EE-----EEEECCCCCEEE-Eee-CCC--cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEE-EEeC----CCcEEE
Q psy2671 463 IN-----CVEFSPDGRIIA-SAS-FDK--SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV-SGSA----DSTLKV 528 (573)
Q Consensus 463 v~-----~v~~sp~g~~la-s~s-~dg--~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~la-s~s~----D~~v~v 528 (573)
|. .++|+|||+.|+ ..+ .+| .|.+||...++......+ .-.+..+. ++|++.|+ +++. .+...|
T Consensus 316 v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g-~~~v~~~~-~~d~~~i~f~~~~~~~~~~~~~l 393 (740)
T 4a5s_A 316 VGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKG-TWEVIGIE-ALTSDYLYYISNEYKGMPGGRNL 393 (740)
T ss_dssp SSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCS-SSCEEEEE-EECSSEEEEEESCGGGCTTCBEE
T ss_pred EccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccC-CEEEEEEE-EEeCCEEEEEEecCCCCCceeEE
Confidence 43 688999999877 555 333 588889887765544444 33444433 24466554 4443 233444
Q ss_pred E--eCCccccccccc----CcCCCEEEEEEccCCCEEEEe
Q psy2671 529 W--NMKTKKIEQDLP----GHGDEVYAVDWAPDGEKVASG 562 (573)
Q Consensus 529 w--d~~~~~~~~~l~----~h~~~v~~~~~s~d~~~l~s~ 562 (573)
| ++.+++....+. +.......+.||||+++++..
T Consensus 394 y~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~ 433 (740)
T 4a5s_A 394 YKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLR 433 (740)
T ss_dssp EEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEE
T ss_pred EEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEE
Confidence 4 555443321222 234568899999999987644
No 150
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=9e-22 Score=213.03 Aligned_cols=311 Identities=11% Similarity=0.085 Sum_probs=206.9
Q ss_pred EEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCC---cEEEEEEcCCCCeEEEEee---------CCeEEEEECC
Q psy2671 212 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKH---WVLCIAWSPDSKQLVSGCK---------NGVIHAWDSS 279 (573)
Q Consensus 212 ~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~---~V~~v~~s~dg~~l~sgs~---------dg~i~vwd~~ 279 (573)
+++|+|||+++++ +.|++|++||+.+++....+.+|.. .+.+++|||||++|++++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6789999965554 5699999999999887766655543 3889999999999998876 7899999999
Q ss_pred CCceec-ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCccE---------------
Q psy2671 280 TGKQIG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-TSHTRSV--------------- 342 (573)
Q Consensus 280 ~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~h~~~v--------------- 342 (573)
+++.+. ..+ ...+..++|+| +++.|+.+. ++.|++|++.+++..+.. .++...+
T Consensus 99 ~g~~~~~~~l---~~~~~~~~~SP-----DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~ 169 (719)
T 1z68_A 99 NGEFVRGNEL---PRPIQYLCWSP-----VGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLA 169 (719)
T ss_dssp TTEECCSSCC---CSSBCCEEECS-----STTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTC
T ss_pred CCccccceec---CcccccceECC-----CCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeeccc
Confidence 886521 112 23466777776 678888875 789999999887765433 2333322
Q ss_pred --EEEEECCCc-EEEEEeCCC----------------------------------eEEEEeCCCCeee--------Eecc
Q psy2671 343 --TCIRWGGSG-LIYSASQDR----------------------------------TIKVWRASDGVMC--------RTLE 377 (573)
Q Consensus 343 --~~~~~~~~~-~l~s~s~d~----------------------------------~i~vw~~~~~~~~--------~~~~ 377 (573)
.++.|+++| .|+.++.|. .|.+||+.++... ..+.
T Consensus 170 ~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 249 (719)
T 1z68_A 170 TKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIA 249 (719)
T ss_dssp SSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHH
T ss_pred CcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCC
Confidence 489999998 577766542 5666776655431 1123
Q ss_pred CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC----CeEEEEc----CCCC
Q psy2671 378 GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD----FTLFLWN----PEKE 449 (573)
Q Consensus 378 ~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d----g~i~lwd----~~~~ 449 (573)
+|...+..++++ |++..+++.... ..|.+|| ..++
T Consensus 250 ~~~~~~~~~~~S-------------------------------------pD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g 292 (719)
T 1z68_A 250 SSDYYFSWLTWV-------------------------------------TDERVCLQWLKRVQNVSVLSICDFREDWQTW 292 (719)
T ss_dssp TSCEEEEEEEES-------------------------------------SSSEEEEEEEESSTTEEEEEEEEECSSSSSE
T ss_pred CCcceEEEeEEe-------------------------------------CCCeEEEEEeccccCeEEEEEEcccCCCCCC
Confidence 455555555554 555555553322 3478888 6554
Q ss_pred ccceeee----ccccccEE-----EEEECCCCCEEEE--eeCCC--cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCE
Q psy2671 450 KKSLARM----TGHQQLIN-----CVEFSPDGRIIAS--ASFDK--SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRL 516 (573)
Q Consensus 450 ~~~~~~~----~~h~~~v~-----~v~~sp~g~~las--~s~dg--~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~ 516 (573)
.. .... .+|...+. .++|+|||+.|+. +..+| .|.+||..+++ ...+..+...+..+.++ +++.
T Consensus 293 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~ 369 (719)
T 1z68_A 293 DC-PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDS 369 (719)
T ss_dssp EC-CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSE
T ss_pred ce-EEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCE
Confidence 32 2222 35666665 7899999996554 44555 57777877766 44555555567777777 8887
Q ss_pred EEEEeCC-----CcEEEEeCCc--ccc-ccc----ccCcCCCEEEEEEccCCCEEEE-eeCC--CcEEEcc
Q psy2671 517 LVSGSAD-----STLKVWNMKT--KKI-EQD----LPGHGDEVYAVDWAPDGEKVAS-GGKD--KVLRLWQ 572 (573)
Q Consensus 517 las~s~D-----~~v~vwd~~~--~~~-~~~----l~~h~~~v~~~~~s~d~~~l~s-~~~d--~~i~iw~ 572 (573)
|+..+.+ +..++|.+.. +.. ... +.+|...+..+.|+||+++|+. ++.+ ..+++|+
T Consensus 370 i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d 440 (719)
T 1z68_A 370 LFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHD 440 (719)
T ss_dssp EEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEEC
T ss_pred EEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEE
Confidence 7766654 7889998753 321 122 3346677889999999998774 4433 3455554
No 151
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=5.8e-21 Score=186.92 Aligned_cols=266 Identities=14% Similarity=0.213 Sum_probs=176.5
Q ss_pred CeEEE-EeeCCeEEEEECC-CCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC-CcEEEEECC--CCe--EEEE
Q psy2671 262 KQLVS-GCKNGVIHAWDSS-TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD-GAIRIWDVI--LSQ--CVRV 334 (573)
Q Consensus 262 ~~l~s-gs~dg~i~vwd~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d-g~v~iwd~~--~~~--~~~~ 334 (573)
+++++ ++.|+.|++|++. ++.........+...+..++|.| +++++++++.+ +.|++|++. .+. .+..
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-----dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSP-----DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAE 79 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECT-----TSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECC-----CCCEEEEeecCCCeEEEEEecCCCCceeeccc
Confidence 34444 4789999999985 33221111223555667777765 66778887776 999999987 444 3334
Q ss_pred ecCCCccEEEEEECCCc-EEEEEe-CCCeEEEEeCCCCe---eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCC
Q psy2671 335 LTSHTRSVTCIRWGGSG-LIYSAS-QDRTIKVWRASDGV---MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPA 409 (573)
Q Consensus 335 ~~~h~~~v~~~~~~~~~-~l~s~s-~d~~i~vw~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~ 409 (573)
+..+. .+.+++|++++ .+++++ .++.|.+|++.++. ....+..+. .+..
T Consensus 80 ~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~------------------------ 133 (343)
T 1ri6_A 80 SALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD-GCHS------------------------ 133 (343)
T ss_dssp EECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT-TBCC------------------------
T ss_pred cccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC-CceE------------------------
Confidence 44444 77899999887 465555 48899999984332 222222111 1111
Q ss_pred CchhhhhhhhhheeeeCCCCcEEEEEe-CCCeEEEEcCCCCccce--e--eec-cccccEEEEEECCCCCEEEEe-eCCC
Q psy2671 410 NPEESSKHALAKYQAQCPEGEKLVSGS-DDFTLFLWNPEKEKKSL--A--RMT-GHQQLINCVEFSPDGRIIASA-SFDK 482 (573)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~l~sg~-~dg~i~lwd~~~~~~~~--~--~~~-~h~~~v~~v~~sp~g~~las~-s~dg 482 (573)
..++|+++.+++++ .++.|++||+....... . ... .....+.+++|+|+|++++++ ..++
T Consensus 134 -------------~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~ 200 (343)
T 1ri6_A 134 -------------ANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS 200 (343)
T ss_dssp -------------CEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred -------------EEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC
Confidence 23457788777777 89999999987622221 1 122 233468899999999977655 4889
Q ss_pred cEEEEeCCC--CeE--EEee---cCC---cceEEEEEECCCCCEEE-EEeCCCcEEEEeCC--c--ccccccccCcCCCE
Q psy2671 483 SIKLWDGRI--GKF--ITTL---RGH---VQAVYMVAWSSDSRLLV-SGSADSTLKVWNMK--T--KKIEQDLPGHGDEV 547 (573)
Q Consensus 483 ~i~lwd~~~--~~~--~~~~---~~h---~~~v~~v~~s~dg~~la-s~s~D~~v~vwd~~--~--~~~~~~l~~h~~~v 547 (573)
.|.+||... ++. ...+ ... ...+..++|+|||++|+ ++..++.|++|++. + .+.+..+..+.. +
T Consensus 201 ~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~ 279 (343)
T 1ri6_A 201 SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-P 279 (343)
T ss_dssp EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-C
T ss_pred EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-c
Confidence 999999853 432 2222 211 23567899999999877 45579999999998 2 234444554444 8
Q ss_pred EEEEEccCCCEEEEee-CCCcEEEcc
Q psy2671 548 YAVDWAPDGEKVASGG-KDKVLRLWQ 572 (573)
Q Consensus 548 ~~~~~s~d~~~l~s~~-~d~~i~iw~ 572 (573)
.+++|+|++++|++++ .++.|.+|+
T Consensus 280 ~~~~~s~dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 280 RGFNVDHSGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp CCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred ceEEECCCCCEEEEecCCCCeEEEEE
Confidence 8999999999888877 679999994
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=9.8e-22 Score=207.21 Aligned_cols=268 Identities=12% Similarity=0.061 Sum_probs=181.4
Q ss_pred ccccEEEEEEcCCCCeeEEeeC-CCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671 109 HAEAVISVKFSPNGRSLASGSG-DTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK 187 (573)
Q Consensus 109 H~~~V~~l~~s~~~~~lat~s~-D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
+..+|.+++|+|||++||+++. |++++||++.++.+.
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~------------------------------------------ 57 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV------------------------------------------ 57 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE------------------------------------------
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE------------------------------------------
Confidence 3557999999999999999987 999999998655321
Q ss_pred eeeEEEeeccccccCCCCCC-CcEEEEEEcCCCCeEEEEeC---CCeEEEEECCC---CeeeEEecCCCCcEEEEEEcCC
Q psy2671 188 QAVFQVRPVTRCTSSMPGHA-EAVISVKFSPNGRSLASGSG---DTTVRFWDVTT---QTPLFKCEGHKHWVLCIAWSPD 260 (573)
Q Consensus 188 ~~~~~~~~~~~~~~~~~gh~-~~V~~~~fsp~g~~las~s~---d~~i~iwd~~~---~~~~~~~~~h~~~V~~v~~s~d 260 (573)
.+..|. ..|.+++|||| +.+++++. +...+||.+.. +... .+..+. .+...+|+||
T Consensus 58 --------------~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~d 120 (582)
T 3o4h_A 58 --------------KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVK-PMRILSGVDT 120 (582)
T ss_dssp --------------ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSC-SBEEEEEEEC
T ss_pred --------------eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCC-CceeeeeCCC
Confidence 122333 68899999999 77777765 55566665432 2222 333222 2446688888
Q ss_pred CCe--EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC----CcEEEEECCCCeEEEE
Q psy2671 261 SKQ--LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD----GAIRIWDVILSQCVRV 334 (573)
Q Consensus 261 g~~--l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~ 334 (573)
|+. +++++.+ .+.+||+.+++... +..+.. .++.|+| +|+.+++++.+ +.|++||+.+++.. .
T Consensus 121 g~~~~~~s~~~~-~~~l~d~~~g~~~~--l~~~~~--~~~~~sp-----DG~~la~~~~~~~~~~~i~~~d~~~g~~~-~ 189 (582)
T 3o4h_A 121 GEAVVFTGATED-RVALYALDGGGLRE--LARLPG--FGFVSDI-----RGDLIAGLGFFGGGRVSLFTSNLSSGGLR-V 189 (582)
T ss_dssp SSCEEEEEECSS-CEEEEEEETTEEEE--EEEESS--CEEEEEE-----ETTEEEEEEEEETTEEEEEEEETTTCCCE-E
T ss_pred CCeEEEEecCCC-CceEEEccCCcEEE--eecCCC--ceEEECC-----CCCEEEEEEEcCCCCeEEEEEcCCCCCce-E
Confidence 864 3444444 45599998876432 112222 4556655 78889987776 77888998776654 5
Q ss_pred ecCCCccEEEEEECCCc-EEEEEeCCC--eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCc
Q psy2671 335 LTSHTRSVTCIRWGGSG-LIYSASQDR--TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP 411 (573)
Q Consensus 335 ~~~h~~~v~~~~~~~~~-~l~s~s~d~--~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 411 (573)
+..|...+..++|+++| .|+++..++ .|.+||+.++... .+
T Consensus 190 l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~----------------------------------- 233 (582)
T 3o4h_A 190 FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DL----------------------------------- 233 (582)
T ss_dssp ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-EC-----------------------------------
T ss_pred eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ec-----------------------------------
Confidence 66777777888888776 455555666 6666666554332 22
Q ss_pred hhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccE--------EEEEECCCCCEEEEeeCCCc
Q psy2671 412 EESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI--------NCVEFSPDGRIIASASFDKS 483 (573)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v--------~~v~~sp~g~~las~s~dg~ 483 (573)
.+|...+ ....|+|||+++++++.|++
T Consensus 234 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~ 268 (582)
T 3o4h_A 234 ---------------------------------------------ELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGR 268 (582)
T ss_dssp ---------------------------------------------CCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTE
T ss_pred ---------------------------------------------cCCCcChhhhhhccccceeEcCCCcEEEEEEcCCc
Confidence 2222222 23449999999999999999
Q ss_pred EEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCc---EEEEeCCc
Q psy2671 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADST---LKVWNMKT 533 (573)
Q Consensus 484 i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~---v~vwd~~~ 533 (573)
+++|+. ++.... +...+.+++|+ |++++++++.+.+ +.+|+..+
T Consensus 269 ~~l~~~--g~~~~~---~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 269 SAVFID--GERVEA---PQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEET--TEEECC---CSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred EEEEEE--CCeecc---CCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 999998 765543 34578899999 9999999887754 77777654
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=1.7e-20 Score=183.06 Aligned_cols=272 Identities=14% Similarity=0.084 Sum_probs=185.5
Q ss_pred CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeeccccccC
Q psy2671 123 RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS 202 (573)
Q Consensus 123 ~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (573)
+++++++.|++|++||..+++.+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~----------------------------------------------------- 28 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVIT----------------------------------------------------- 28 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEE-----------------------------------------------------
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEE-----------------------------------------------------
Confidence 578999999999999998875432110
Q ss_pred CCCCCC-cEEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecC-C----CCcEEEEEEcCCCCeEEEEe-------
Q psy2671 203 MPGHAE-AVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEG-H----KHWVLCIAWSPDSKQLVSGC------- 268 (573)
Q Consensus 203 ~~gh~~-~V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~-h----~~~V~~v~~s~dg~~l~sgs------- 268 (573)
.++.. .+.+++|+|+|+++ ++++.++.|.+||+.+++.+..+.. + ...+.+++|+|||++|++++
T Consensus 29 -~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 107 (337)
T 1pby_B 29 -IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLEL 107 (337)
T ss_dssp -CTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECS
T ss_pred -cCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccc
Confidence 01211 35678999999876 4556688999999999887765542 2 12467899999999998886
Q ss_pred -----eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC--cc
Q psy2671 269 -----KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT--RS 341 (573)
Q Consensus 269 -----~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~--~~ 341 (573)
.++.|.+||+.+++..... .. ...+..+.|.| ++++++++ ++.|++||+.+++....+..+. ..
T Consensus 108 ~~~~~~~~~i~v~d~~~~~~~~~~-~~-~~~~~~~~~s~-----dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~ 178 (337)
T 1pby_B 108 THFEVQPTRVALYDAETLSRRKAF-EA-PRQITMLAWAR-----DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAE 178 (337)
T ss_dssp SCEEECCCEEEEEETTTTEEEEEE-EC-CSSCCCEEECT-----TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTT
T ss_pred ccccccCceEEEEECCCCcEEEEE-eC-CCCcceeEECC-----CCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCC
Confidence 5799999999887654322 11 22345566654 56767766 6899999999988877665443 22
Q ss_pred EEEEEECCCcE-EEEEe-CCC-----------------------eEEEEeCCCCeee-EeccCCcceeeEEEeccCceeE
Q psy2671 342 VTCIRWGGSGL-IYSAS-QDR-----------------------TIKVWRASDGVMC-RTLEGHAHWVNTLALSTDYLMR 395 (573)
Q Consensus 342 v~~~~~~~~~~-l~s~s-~d~-----------------------~i~vw~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~~ 395 (573)
+ .|++++. ++..+ .++ .|.+||..++... ..+..+...+..++
T Consensus 179 ~---~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~-------- 247 (337)
T 1pby_B 179 T---YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTA-------- 247 (337)
T ss_dssp T---BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEE--------
T ss_pred c---eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEE--------
Confidence 2 4555542 32222 222 4678888776543 11112222222233
Q ss_pred EEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEE
Q psy2671 396 VEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII 475 (573)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l 475 (573)
.+|++++++++ ++.|++||+.+.+. ...+.. ...+.+++|+|+|++|
T Consensus 248 -----------------------------~s~dg~~l~~~--~~~v~~~d~~~~~~-~~~~~~-~~~~~~~~~s~dg~~l 294 (337)
T 1pby_B 248 -----------------------------VNPAKTRAFGA--YNVLESFDLEKNAS-IKRVPL-PHSYYSVNVSTDGSTV 294 (337)
T ss_dssp -----------------------------ECTTSSEEEEE--ESEEEEEETTTTEE-EEEEEC-SSCCCEEEECTTSCEE
T ss_pred -----------------------------ECCCCCEEEEe--CCeEEEEECCCCcC-cceecC-CCceeeEEECCCCCEE
Confidence 34678888877 79999999876543 333332 2457899999999999
Q ss_pred EEeeCCCcEEEEeCCCCeEEEeecCC
Q psy2671 476 ASASFDKSIKLWDGRIGKFITTLRGH 501 (573)
Q Consensus 476 as~s~dg~i~lwd~~~~~~~~~~~~h 501 (573)
++++.++.|++||..+++.+..+..+
T Consensus 295 ~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 295 WLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EEESBSSEEEEEETTTCCEEEEEECG
T ss_pred EEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 99999999999999999888777654
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.88 E-value=1.4e-20 Score=184.61 Aligned_cols=298 Identities=15% Similarity=0.106 Sum_probs=192.3
Q ss_pred EEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCC-CcEEEEEEcCCCCeEE-EEeeCCeEEEEECCCCceeccccc
Q psy2671 212 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHK-HWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGKQIGQPMR 289 (573)
Q Consensus 212 ~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~-~~V~~v~~s~dg~~l~-sgs~dg~i~vwd~~~~~~~~~~~~ 289 (573)
.++++++++++++++.+++|.+||..+++.+..+..+. ..+..++|+|||++++ ++..++.|.+||+.+++.......
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45678889999999999999999999998877766443 2467899999998765 455789999999998876533222
Q ss_pred CC-----cccEEEEEecccccCCCCCEEEEEeCC------------CcEEEEECCCCeE---EEEecCCCccEEEEEECC
Q psy2671 290 GH-----KQWITALSWEPFHLNHQCRRFASSGKD------------GAIRIWDVILSQC---VRVLTSHTRSVTCIRWGG 349 (573)
Q Consensus 290 ~h-----~~~v~~~~~~~~~~~~~~~~l~s~~~d------------g~v~iwd~~~~~~---~~~~~~h~~~v~~~~~~~ 349 (573)
++ ...+..+.|.| +++++++++.+ +.|.+||+.+++. +..+.. ...+.+++|++
T Consensus 84 ~~~~~~~~~~~~~~~~sp-----dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~ 157 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISP-----DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAAD 157 (349)
T ss_dssp CCSTTEEEECSSCEEECT-----TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECT
T ss_pred ccccccccccccceEECC-----CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECC
Confidence 22 22244555554 67888888765 8999999987432 233333 33578889998
Q ss_pred CcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC-
Q psy2671 350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE- 428 (573)
Q Consensus 350 ~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 428 (573)
++.++.++.+ |.+||..++.....+..+...... ...++.. ..+........ ..........++
T Consensus 158 dg~l~~~~~~--i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~d~ 222 (349)
T 1jmx_B 158 DGSLYVAGPD--IYKMDVKTGKYTVALPLRNWNRKG-YSAPDVL----------YFWPHQSPRHE--FSMLYTIARFKDD 222 (349)
T ss_dssp TSCEEEESSS--EEEECTTTCCEEEEECSTTCCCTT-BCCCBCC----------CCCCCCCTTCE--EEEEEEEEEC---
T ss_pred CCcEEEccCc--EEEEeCCCCceeccccccccCCcc-ccCccce----------eeecCCCccee--EEeeeeeeecCCC
Confidence 8877776544 999999988776655432100000 0000000 00000000000 000000000000
Q ss_pred ----------CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCCeEEEe
Q psy2671 429 ----------GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGKFITT 497 (573)
Q Consensus 429 ----------~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~~~~~~ 497 (573)
..++.....++.+++|+. ..+...+..++|+| +|++++++ ++.|.+||..+++.+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~ 290 (349)
T 1jmx_B 223 KQDPATADLLYGYLSVDLKTGKTHTQEF----------ADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKA 290 (349)
T ss_dssp ----CCCEEEEEEEEEETTTCCEEEEEE----------EECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEE
T ss_pred cCCccccccceeEEEEeccCCcEEeccc----------ccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEE
Confidence 011222333444555443 22445688999999 99999988 88999999999988777
Q ss_pred ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCc
Q psy2671 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543 (573)
Q Consensus 498 ~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h 543 (573)
+..+ ..+.+++|+|||++|++++.++.|++||+.+++.+..++..
T Consensus 291 ~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 291 ANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EECS-SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred EcCC-CCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 7543 34678999999999998888999999999988877665433
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=2.1e-18 Score=170.22 Aligned_cols=264 Identities=11% Similarity=0.107 Sum_probs=171.8
Q ss_pred CCcEEEEEEcCCCCeEEEEeCC----CeEEEEECCC--Ce--eeEEecCCCCcEEEEEEcCCCCeEEEEe-eCCeEEEEE
Q psy2671 207 AEAVISVKFSPNGRSLASGSGD----TTVRFWDVTT--QT--PLFKCEGHKHWVLCIAWSPDSKQLVSGC-KNGVIHAWD 277 (573)
Q Consensus 207 ~~~V~~~~fsp~g~~las~s~d----~~i~iwd~~~--~~--~~~~~~~h~~~V~~v~~s~dg~~l~sgs-~dg~i~vwd 277 (573)
...+..++|+|||++|++++.+ +.|.+|++.. ++ .+.....+......+++ ++++|++++ .++.|.+|+
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~ 126 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFP 126 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEE
Confidence 3456678999999999999886 7999998765 43 33344445556777888 888887776 578999999
Q ss_pred CCCCceeccc-------------ccCCcccEEEEEecccccCCCCCEEEEE-eCCCcEEEEECCCCeE------------
Q psy2671 278 SSTGKQIGQP-------------MRGHKQWITALSWEPFHLNHQCRRFASS-GKDGAIRIWDVILSQC------------ 331 (573)
Q Consensus 278 ~~~~~~~~~~-------------~~~h~~~v~~~~~~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~~~------------ 331 (573)
+.....+... ...+...+.++.|.| ++++++.+ ..++.|++|++.....
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-----dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~ 201 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-----DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGT 201 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-----TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEE
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-----CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccc
Confidence 8754332111 011223456777765 66755544 4588999998764331
Q ss_pred -EEEecCCCccEEEEEECCCc-EEEEEe-CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCC
Q psy2671 332 -VRVLTSHTRSVTCIRWGGSG-LIYSAS-QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408 (573)
Q Consensus 332 -~~~~~~h~~~v~~~~~~~~~-~l~s~s-~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~ 408 (573)
......+......++|++++ .+++++ .++.|.+|++.++......
T Consensus 202 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~-------------------------------- 249 (361)
T 3scy_A 202 PEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQ-------------------------------- 249 (361)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEE--------------------------------
T ss_pred ccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeE--------------------------------
Confidence 11122334556788888887 455555 5788888887644321000
Q ss_pred CCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC--CCcEEE
Q psy2671 409 ANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF--DKSIKL 486 (573)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~--dg~i~l 486 (573)
.......+......++|+|||++|+++.. ++.|.+
T Consensus 250 -------------------------------------------~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v 286 (361)
T 3scy_A 250 -------------------------------------------TVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAI 286 (361)
T ss_dssp -------------------------------------------EEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEE
T ss_pred -------------------------------------------EEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEE
Confidence 00001112233578999999998877665 489999
Q ss_pred EeCC--CCe--EEEeecCCcceEEEEEECCCCCEEEEEe-CCCcEEEEeC--Ccccccccc-cCcCCCEEEEEEc
Q psy2671 487 WDGR--IGK--FITTLRGHVQAVYMVAWSSDSRLLVSGS-ADSTLKVWNM--KTKKIEQDL-PGHGDEVYAVDWA 553 (573)
Q Consensus 487 wd~~--~~~--~~~~~~~h~~~v~~v~~s~dg~~las~s-~D~~v~vwd~--~~~~~~~~l-~~h~~~v~~~~~s 553 (573)
|++. +++ .+..+.. ...+..++|+|||++|++++ .++.|.+|++ .++++.... ..+...+.|+.|.
T Consensus 287 ~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 287 FKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 9985 444 3444443 34567899999999988887 6789999654 566654432 2244578888886
No 156
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.85 E-value=3.9e-20 Score=186.45 Aligned_cols=239 Identities=15% Similarity=0.145 Sum_probs=157.3
Q ss_pred CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC----------eeeE-----EecCCCCcEEEEEEcCCCCeEE----EE
Q psy2671 207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ----------TPLF-----KCEGHKHWVLCIAWSPDSKQLV----SG 267 (573)
Q Consensus 207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~----------~~~~-----~~~~h~~~V~~v~~s~dg~~l~----sg 267 (573)
...+..+++++++.++++++.|+ +++|+.... ..+. ....+...|.+++|+|+|++|+ +|
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34578899999999999999887 899874210 0111 1123566799999999999999 78
Q ss_pred eeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEE
Q psy2671 268 CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347 (573)
Q Consensus 268 s~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~ 347 (573)
+.|+.|++||+.++.. +... ..+ .-.....+.+|...|.+++|
T Consensus 115 s~d~~v~iwd~~~~~~------~~~~--------------~~~-----------------~~~~~~~~~~h~~~V~~v~~ 157 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSN------EAKQ--------------QKR-----------------PFAYHKLLKDAGGMVIDMKW 157 (434)
T ss_dssp TTEEEEEEEEHHHHHC------TTCS--------------SCC-----------------CSEEEECCCSGGGSEEEEEE
T ss_pred CCCceEEEEEcccccc------CCcC--------------Ccc-----------------eeeeeeccCCCCCceEEEEE
Confidence 8999999999864310 0000 000 00112344567778888888
Q ss_pred CCC--cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671 348 GGS--GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ 425 (573)
Q Consensus 348 ~~~--~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (573)
+++ ..+++++.|++|++||++++..
T Consensus 158 ~p~~~~~las~s~Dg~v~iwD~~~~~~----------------------------------------------------- 184 (434)
T 2oit_A 158 NPTVPSMVAVCLADGSIAVLQVTETVK----------------------------------------------------- 184 (434)
T ss_dssp CSSCTTEEEEEETTSCEEEEEESSSEE-----------------------------------------------------
T ss_pred CCCCCCEEEEEECCCeEEEEEcCCCcc-----------------------------------------------------
Confidence 764 2566667777777776554311
Q ss_pred CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC----
Q psy2671 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH---- 501 (573)
Q Consensus 426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h---- 501 (573)
.....+|...|.+++|+|+|++|++|+.||+|++||.+ ++....+..|
T Consensus 185 ---------------------------~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~ 236 (434)
T 2oit_A 185 ---------------------------VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYE 236 (434)
T ss_dssp ---------------------------EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCC
T ss_pred ---------------------------eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccC
Confidence 11223467789999999999999999999999999998 5555555433
Q ss_pred ---cceEEEEEECCCCCEEEEE-eCCC------cEEEEeCCccccc-----ccc-------cCcCCCEEEEEEccCCCEE
Q psy2671 502 ---VQAVYMVAWSSDSRLLVSG-SADS------TLKVWNMKTKKIE-----QDL-------PGHGDEVYAVDWAPDGEKV 559 (573)
Q Consensus 502 ---~~~v~~v~~s~dg~~las~-s~D~------~v~vwd~~~~~~~-----~~l-------~~h~~~v~~~~~s~d~~~l 559 (573)
...|.+++|++++.++++. +.|| .+++|++...+.. ..+ .+...+-..+.+-+|.+.+
T Consensus 237 ~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~ 316 (434)
T 2oit_A 237 SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLV 316 (434)
T ss_dssp TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEE
T ss_pred CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEE
Confidence 3489999999998887653 3443 3899999764211 111 1222333344455777776
Q ss_pred EEeeC
Q psy2671 560 ASGGK 564 (573)
Q Consensus 560 ~s~~~ 564 (573)
++++.
T Consensus 317 ~v~s~ 321 (434)
T 2oit_A 317 LAASA 321 (434)
T ss_dssp EEEET
T ss_pred EEecC
Confidence 65554
No 157
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.85 E-value=2e-20 Score=188.57 Aligned_cols=214 Identities=14% Similarity=0.165 Sum_probs=155.4
Q ss_pred ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ 188 (573)
Q Consensus 109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
+...+..+++++++.++++++.|+ ++||+........... ....... ...
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~-------------------------~~~~~~~--~~~-- 84 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPG-------------------------DDPNKIV--DKV-- 84 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTT-------------------------CCTTCEE--ECC--
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccc-------------------------cCccccc--ccC--
Confidence 345688999999999999999988 9999864321100000 0000000 000
Q ss_pred eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEE----EEeCCCeEEEEECCCC--------ee---eEEecCCCCcEE
Q psy2671 189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA----SGSGDTTVRFWDVTTQ--------TP---LFKCEGHKHWVL 253 (573)
Q Consensus 189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~la----s~s~d~~i~iwd~~~~--------~~---~~~~~~h~~~V~ 253 (573)
......|...|.+++|+|+|++|| +|+.|++|+|||+.++ ++ +..+.+|...|.
T Consensus 85 -----------~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 153 (434)
T 2oit_A 85 -----------QGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVI 153 (434)
T ss_dssp -----------CCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEE
T ss_pred -----------ccccccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceE
Confidence 000113667899999999999999 7889999999998654 22 345668999999
Q ss_pred EEEEcCC-CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE
Q psy2671 254 CIAWSPD-SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332 (573)
Q Consensus 254 ~v~~s~d-g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 332 (573)
+++|+|+ +.+|++++.||+|++||++++... ....+|...|.+++|+| ++++|++++.||+|++||.. ++..
T Consensus 154 ~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~-~~~~~~~~~v~~v~wsp-----dg~~lasgs~dg~v~iwd~~-~~~~ 226 (434)
T 2oit_A 154 DMKWNPTVPSMVAVCLADGSIAVLQVTETVKV-CATLPSTVAVTSVCWSP-----KGKQLAVGKQNGTVVQYLPT-LQEK 226 (434)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEEESSSEEE-EEEECGGGCEEEEEECT-----TSSCEEEEETTSCEEEECTT-CCEE
T ss_pred EEEECCCCCCEEEEEECCCeEEEEEcCCCcce-eeccCCCCceeEEEEcC-----CCCEEEEEcCCCcEEEEccC-Cccc
Confidence 9999998 789999999999999999988543 23456889999999987 57889999999999999998 4555
Q ss_pred EEecCC-------CccEEEEEECCCcEEE--EEeCCC------eEEEEeCCCC
Q psy2671 333 RVLTSH-------TRSVTCIRWGGSGLIY--SASQDR------TIKVWRASDG 370 (573)
Q Consensus 333 ~~~~~h-------~~~v~~~~~~~~~~l~--s~s~d~------~i~vw~~~~~ 370 (573)
..+..| ...|.++.|.+++.++ ..+.|| .+++|+++..
T Consensus 227 ~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 227 KVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 544433 3489999999887544 233443 3889998753
No 158
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.85 E-value=1.4e-19 Score=180.54 Aligned_cols=293 Identities=13% Similarity=0.109 Sum_probs=193.3
Q ss_pred EEECCCCeeeEEecCCCCcEEE-----EEEcCCCCeEEEEee-CC--eEEEEECCCCceecccccCCcccEEEEEecccc
Q psy2671 233 FWDVTTQTPLFKCEGHKHWVLC-----IAWSPDSKQLVSGCK-NG--VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304 (573)
Q Consensus 233 iwd~~~~~~~~~~~~h~~~V~~-----v~~s~dg~~l~sgs~-dg--~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~ 304 (573)
.+|..++..+..+..|...... .+|||||++|+.++. ++ .|.+||+.+++.. +...++...+....|.|
T Consensus 14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~-~lt~~~~~~~~~~~~sp-- 90 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT-QLTEGRGDNTFGGFLSP-- 90 (388)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE-ECCCSSCBCSSSCEECT--
T ss_pred EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE-EeeeCCCCCccceEEcC--
Confidence 4567777777888877766666 789999999998887 66 4888899887654 33445544443445554
Q ss_pred cCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEE--CCCcEEEEE-----------------------eCC
Q psy2671 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW--GGSGLIYSA-----------------------SQD 359 (573)
Q Consensus 305 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~~l~s~-----------------------s~d 359 (573)
+++.|+.++.++.+++||+.+++.......+...+....| ++++..+.+ ..+
T Consensus 91 ---dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (388)
T 3pe7_A 91 ---DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPC 167 (388)
T ss_dssp ---TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCC
T ss_pred ---CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCc
Confidence 7889999999999999999998877766666665544443 666643332 244
Q ss_pred CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC-CCcEEEEEeCC
Q psy2671 360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP-EGEKLVSGSDD 438 (573)
Q Consensus 360 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~d 438 (573)
..|.+||+.++.... +..+...+..++++ | +|..|+..+.+
T Consensus 168 ~~l~~~d~~~g~~~~-l~~~~~~~~~~~~s-------------------------------------p~dg~~l~~~~~~ 209 (388)
T 3pe7_A 168 CRLMRVDLKTGESTV-ILQENQWLGHPIYR-------------------------------------PYDDSTVAFCHEG 209 (388)
T ss_dssp EEEEEEETTTCCEEE-EEEESSCEEEEEEE-------------------------------------TTEEEEEEEEECS
T ss_pred ceEEEEECCCCceEE-eecCCccccccEEC-------------------------------------CCCCCEEEEEEec
Confidence 678889988775433 22333344445544 4 45666655543
Q ss_pred ------CeEEEEcCCCCccceeeecccc--ccEEEEEECCCCCEEEEeeC-CC----cEEEEeCCCCeE--EEeecCCcc
Q psy2671 439 ------FTLFLWNPEKEKKSLARMTGHQ--QLINCVEFSPDGRIIASASF-DK----SIKLWDGRIGKF--ITTLRGHVQ 503 (573)
Q Consensus 439 ------g~i~lwd~~~~~~~~~~~~~h~--~~v~~v~~sp~g~~las~s~-dg----~i~lwd~~~~~~--~~~~~~h~~ 503 (573)
..|.++|..... ...+..+. ..+..++|+|||+.|+..+. ++ .|.+||+.+++. +..+.++..
T Consensus 210 ~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 287 (388)
T 3pe7_A 210 PHDLVDARMWLINEDGTN--MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSH 287 (388)
T ss_dssp CTTTSSCSEEEEETTSCC--CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEE
T ss_pred CCCCCcceEEEEeCCCCc--eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCcee
Confidence 367777765432 23333333 35778999999997765443 22 399999998864 334444211
Q ss_pred eEE---EEEECCCCCEEEEE---------eCCCcEEEEeCCcccccccccCcCC-----------CEEEEEEccCCCEEE
Q psy2671 504 AVY---MVAWSSDSRLLVSG---------SADSTLKVWNMKTKKIEQDLPGHGD-----------EVYAVDWAPDGEKVA 560 (573)
Q Consensus 504 ~v~---~v~~s~dg~~las~---------s~D~~v~vwd~~~~~~~~~l~~h~~-----------~v~~~~~s~d~~~l~ 560 (573)
... .++|+|||+.|+.. ..+..|++||+.+++. ..+..|.. .+.+++|+|||++|+
T Consensus 288 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~ 366 (388)
T 3pe7_A 288 LMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQIL 366 (388)
T ss_dssp EEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEE
T ss_pred eeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEE
Confidence 111 13799999988754 4566899999988765 33444544 577889999999888
Q ss_pred Eee-CCCcEEEcc
Q psy2671 561 SGG-KDKVLRLWQ 572 (573)
Q Consensus 561 s~~-~d~~i~iw~ 572 (573)
.++ .++...||.
T Consensus 367 ~~s~~~g~~~l~~ 379 (388)
T 3pe7_A 367 FTSDVHGKPALYL 379 (388)
T ss_dssp EEECTTSSCEEEE
T ss_pred EEecCCCceeEEE
Confidence 665 567777774
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=3.9e-19 Score=174.38 Aligned_cols=284 Identities=11% Similarity=0.065 Sum_probs=177.2
Q ss_pred EEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEe
Q psy2671 115 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVR 194 (573)
Q Consensus 115 ~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (573)
+++++++++++++++.|++|++||..+++.+....
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~--------------------------------------------- 38 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCV--------------------------------------------- 38 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEE---------------------------------------------
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEe---------------------------------------------
Confidence 45678899999999999999999998875432111
Q ss_pred eccccccCCCCCCCcEEEEEEcCCCCeEE-EEeCCCeEEEEECCCCeeeEEecCCC------CcEEEEEEcCCCCeEEEE
Q psy2671 195 PVTRCTSSMPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHK------HWVLCIAWSPDSKQLVSG 267 (573)
Q Consensus 195 ~~~~~~~~~~gh~~~V~~~~fsp~g~~la-s~s~d~~i~iwd~~~~~~~~~~~~h~------~~V~~v~~s~dg~~l~sg 267 (573)
. +....+..++|+|+|++++ ++..++.|.+||+.+++.+..+..+. ..+.+++|+|||++|+++
T Consensus 39 --------~-~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 109 (349)
T 1jmx_B 39 --------M-PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYAT 109 (349)
T ss_dssp --------C-SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEE
T ss_pred --------c-CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEE
Confidence 0 1111356789999998665 55578999999999988776655322 236789999999999998
Q ss_pred eeC------------CeEEEEECCCCceeccc-ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q psy2671 268 CKN------------GVIHAWDSSTGKQIGQP-MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV 334 (573)
Q Consensus 268 s~d------------g~i~vwd~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 334 (573)
+.+ +.|.+||+.+++..... ...+...+.+++|.| +++ +..++. .|++||..+++....
T Consensus 110 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~-----dg~-l~~~~~--~i~~~d~~~~~~~~~ 181 (349)
T 1jmx_B 110 VNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD-----DGS-LYVAGP--DIYKMDVKTGKYTVA 181 (349)
T ss_dssp EEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECT-----TSC-EEEESS--SEEEECTTTCCEEEE
T ss_pred cccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECC-----CCc-EEEccC--cEEEEeCCCCceecc
Confidence 876 89999999875432111 111223466666655 566 444443 499999998887766
Q ss_pred ecCCCc------------------------cEEEEEECCCcEE--EEEeCCCeEEEEeCCCCeeeE-eccCCcceeeEEE
Q psy2671 335 LTSHTR------------------------SVTCIRWGGSGLI--YSASQDRTIKVWRASDGVMCR-TLEGHAHWVNTLA 387 (573)
Q Consensus 335 ~~~h~~------------------------~v~~~~~~~~~~l--~s~s~d~~i~vw~~~~~~~~~-~~~~~~~~v~~~~ 387 (573)
+..+.. ...++++.+++.. ........+..++..++.... .+..+......+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 260 (349)
T 1jmx_B 182 LPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTG- 260 (349)
T ss_dssp ECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEE-
T ss_pred ccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceee-
Confidence 653320 1223333322100 000000011112222221100 000011111112
Q ss_pred eccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC-CCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEE
Q psy2671 388 LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP-EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV 466 (573)
Q Consensus 388 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v 466 (573)
..+| ++.+++++ ++.|.+||+.+.+. ...+.. ...+.++
T Consensus 261 ------------------------------------~~sp~dg~~l~~~--~~~v~~~d~~~~~~-~~~~~~-~~~~~~~ 300 (349)
T 1jmx_B 261 ------------------------------------LRSPKDPNQIYGV--LNRLAKYDLKQRKL-IKAANL-DHTYYCV 300 (349)
T ss_dssp ------------------------------------EECSSCTTEEEEE--ESEEEEEETTTTEE-EEEEEC-SSCCCEE
T ss_pred ------------------------------------EecCCCCCEEEEE--cCeEEEEECccCeE-EEEEcC-CCCccce
Confidence 2346 78888877 88999999987543 223322 2346789
Q ss_pred EECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC
Q psy2671 467 EFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH 501 (573)
Q Consensus 467 ~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h 501 (573)
+|+|+|++|++++.++.|++||..+++.+..++.+
T Consensus 301 ~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 301 AFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred EECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 99999998888888999999999999887776543
No 160
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.84 E-value=1.4e-18 Score=170.88 Aligned_cols=296 Identities=11% Similarity=0.092 Sum_probs=199.0
Q ss_pred CCCeEEEEe------CCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe----------eCCeEEEEECCCC
Q psy2671 218 NGRSLASGS------GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC----------KNGVIHAWDSSTG 281 (573)
Q Consensus 218 ~g~~las~s------~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs----------~dg~i~vwd~~~~ 281 (573)
+++++.... .|++|.+||..+++.+..+..+..+ .++|+|||++|+++. .++.|.+||..++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 455555543 3789999999999888777766554 899999999999886 3678999999887
Q ss_pred ceecccccC-----CcccEEEEEecccccCCCCCEEEEEeC--CCcEEEEECCCCeEEEE-ecCCCccEEEEEECCCc--
Q psy2671 282 KQIGQPMRG-----HKQWITALSWEPFHLNHQCRRFASSGK--DGAIRIWDVILSQCVRV-LTSHTRSVTCIRWGGSG-- 351 (573)
Q Consensus 282 ~~~~~~~~~-----h~~~v~~~~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~-- 351 (573)
+.+.....+ +......+.+ +++++++.++.. +++|.+||+.+++.+.. +.... ...+.+.+.+
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~-----spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~ 164 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQ-----TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPR 164 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEE-----CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--EEEEEECTTSSS
T ss_pred cEEEEEEcCccccccCCCcceEEE-----CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--cceeEEcCCCCe
Confidence 665332111 1112223343 457888877753 68999999999988777 54322 1223344433
Q ss_pred EEEEEeCCCeEEEEeCCC-CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc
Q psy2671 352 LIYSASQDRTIKVWRASD-GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE 430 (573)
Q Consensus 352 ~l~s~s~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (573)
.+++.+.||.+.+|+... +....... .. ..+..... ..+....+++.
T Consensus 165 ~~~~~~~dg~~~~v~~~~~g~~~~~~~--~~----------------------~~~~~~~~--------~~~~~~~~~g~ 212 (361)
T 2oiz_A 165 SFMTICGDGGLLTINLGEDGKVASQSR--SK----------------------QMFSVKDD--------PIFIAPALDKD 212 (361)
T ss_dssp EEEEEETTSSEEEEEECTTSSEEEEEE--CC----------------------CCSCTTTS--------CBCSCCEECSS
T ss_pred eEEEECCCCcEEEEEECCCCcEeeecc--cc----------------------ceEcCCCC--------ceEEEecccCC
Confidence 678889999999998754 43221100 00 00000000 00011124456
Q ss_pred EEEEEeCCCeEEEEcCCCCccce-eeec--c----cc----ccEEEEEECCCCCEEEEeeC-----------CCcEEEEe
Q psy2671 431 KLVSGSDDFTLFLWNPEKEKKSL-ARMT--G----HQ----QLINCVEFSPDGRIIASASF-----------DKSIKLWD 488 (573)
Q Consensus 431 ~l~sg~~dg~i~lwd~~~~~~~~-~~~~--~----h~----~~v~~v~~sp~g~~las~s~-----------dg~i~lwd 488 (573)
.++..+.++.+.++|+....... ..+. . +. .....++|+|+++.+.++.. .+.|.+||
T Consensus 213 ~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD 292 (361)
T 2oiz_A 213 KAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMD 292 (361)
T ss_dssp EEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEE
T ss_pred EEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEE
Confidence 66777788999999986543211 1110 0 00 01112789999887776543 34799999
Q ss_pred CCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc--cccccccCcCCCEEEEEEccCCC
Q psy2671 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK--KIEQDLPGHGDEVYAVDWAPDGE 557 (573)
Q Consensus 489 ~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~--~~~~~l~~h~~~v~~~~~s~d~~ 557 (573)
..+++.+.++..+. ...++|+|||++|++++. ++|.+||..++ +.+..+..+...-..+.++|||+
T Consensus 293 ~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 293 TKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 99999999998876 889999999999998887 99999999999 88888766777888999999986
No 161
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=2e-18 Score=169.44 Aligned_cols=267 Identities=10% Similarity=0.053 Sum_probs=171.0
Q ss_pred CCCeEEEEECC--CCeeeE-EecCCCCcEEEEEEcCCCCeEEEEee---CCeEEEEECCCCcee-cccccCCcccEEEEE
Q psy2671 227 GDTTVRFWDVT--TQTPLF-KCEGHKHWVLCIAWSPDSKQLVSGCK---NGVIHAWDSSTGKQI-GQPMRGHKQWITALS 299 (573)
Q Consensus 227 ~d~~i~iwd~~--~~~~~~-~~~~h~~~V~~v~~s~dg~~l~sgs~---dg~i~vwd~~~~~~~-~~~~~~h~~~v~~~~ 299 (573)
.++.|.+|++. +++... ....+......++|+|||+ |++++. ++.|.+|++.++... ......+...+..++
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 35567777654 454322 2233445677899999999 666655 589999999766531 112223445566677
Q ss_pred ecccccCCCCCEEEEEe-CCCcEEEEECCC-C--eEEEEecC---------CCccEEEEEECCCcEEE-EEeCCCeEEEE
Q psy2671 300 WEPFHLNHQCRRFASSG-KDGAIRIWDVIL-S--QCVRVLTS---------HTRSVTCIRWGGSGLIY-SASQDRTIKVW 365 (573)
Q Consensus 300 ~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~-~--~~~~~~~~---------h~~~v~~~~~~~~~~l~-s~s~d~~i~vw 365 (573)
|.| +++++++++ .++.+++|++.. + ..+..+.. +...+.+++|++++.++ +...++.|.+|
T Consensus 93 ~sp-----dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~ 167 (347)
T 3hfq_A 93 VDE-----ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVY 167 (347)
T ss_dssp EET-----TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred ECC-----CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEE
Confidence 665 677777777 789999999853 2 22222221 12348889999887544 44568899999
Q ss_pred eCC-CCeeeEe--ccCC-cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE-EeCCCe
Q psy2671 366 RAS-DGVMCRT--LEGH-AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS-GSDDFT 440 (573)
Q Consensus 366 ~~~-~~~~~~~--~~~~-~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-g~~dg~ 440 (573)
++. ++..... +..+ ...... ..++|+|+++++ ...++.
T Consensus 168 ~~~~~g~~~~~~~~~~~~g~~p~~-------------------------------------~~~spdg~~l~v~~~~~~~ 210 (347)
T 3hfq_A 168 NVSDAGQLSEQSVLTMEAGFGPRH-------------------------------------LVFSPDGQYAFLAGELSSQ 210 (347)
T ss_dssp EECTTSCEEEEEEEECCTTCCEEE-------------------------------------EEECTTSSEEEEEETTTTE
T ss_pred EECCCCcEEEeeeEEcCCCCCCce-------------------------------------EEECCCCCEEEEEeCCCCE
Confidence 987 4433211 1110 001111 234577885554 567889
Q ss_pred EEEEcCCC--Ccc-ceeeecccc------ccEEEEEECCCCCEE-EEeeCCCcEEEEeCCC---CeEEEeecCCcceEEE
Q psy2671 441 LFLWNPEK--EKK-SLARMTGHQ------QLINCVEFSPDGRII-ASASFDKSIKLWDGRI---GKFITTLRGHVQAVYM 507 (573)
Q Consensus 441 i~lwd~~~--~~~-~~~~~~~h~------~~v~~v~~sp~g~~l-as~s~dg~i~lwd~~~---~~~~~~~~~h~~~v~~ 507 (573)
+++|++.. +.. ....+.... ..+..++|+|||++| ++...++.|.+||+.. .+.+..+..+...+..
T Consensus 211 v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~ 290 (347)
T 3hfq_A 211 IASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRD 290 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCE
T ss_pred EEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCe
Confidence 99998764 221 112222211 347889999999977 4556789999999862 2455666666666789
Q ss_pred EEECCCCCEEEEEeCC-CcEEEEeC--Ccccc
Q psy2671 508 VAWSSDSRLLVSGSAD-STLKVWNM--KTKKI 536 (573)
Q Consensus 508 v~~s~dg~~las~s~D-~~v~vwd~--~~~~~ 536 (573)
++|+|||++|++++.+ +.|.+|++ .++++
T Consensus 291 ~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 291 FDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 9999999998888764 89999954 55554
No 162
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=1.6e-18 Score=170.14 Aligned_cols=269 Identities=17% Similarity=0.217 Sum_probs=168.1
Q ss_pred CCeEEEEEC--CCCceecccccCCcccEEEEEecccccCCCCCEEEEEeC---CCcEEEEECCCCe--EEEEecCCCccE
Q psy2671 270 NGVIHAWDS--STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK---DGAIRIWDVILSQ--CVRVLTSHTRSV 342 (573)
Q Consensus 270 dg~i~vwd~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~--~~~~~~~h~~~v 342 (573)
++.|.+|++ .+++........+......++|.| +++ +++++. ++.|++|++..+. .+..+..+...+
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~sp-----dg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p 88 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSA-----KDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPP 88 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECT-----TCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCC
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEcc-----CCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCC
Confidence 455666654 445432212223334455566655 566 444443 6899999997665 333444566778
Q ss_pred EEEEECCCc-EEEEEe-CCCeEEEEeCCC-Ceee--EeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671 343 TCIRWGGSG-LIYSAS-QDRTIKVWRASD-GVMC--RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH 417 (573)
Q Consensus 343 ~~~~~~~~~-~l~s~s-~d~~i~vw~~~~-~~~~--~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (573)
..++|++++ .+++++ .++++.+|++.. +... ..+..... .+. .....
T Consensus 89 ~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~-------------------------~p~---~~~~~ 140 (347)
T 3hfq_A 89 AYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH-------------------------GPR---PEQDG 140 (347)
T ss_dssp SEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC-------------------------CSS---TTCSS
T ss_pred EEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC-------------------------CCC---ccccC
Confidence 899999887 577777 789999999853 3211 11110000 000 00000
Q ss_pred hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccc--eeeecc-ccccEEEEEECCCCCEEEE-eeCCCcEEEEeCCC--
Q psy2671 418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS--LARMTG-HQQLINCVEFSPDGRIIAS-ASFDKSIKLWDGRI-- 491 (573)
Q Consensus 418 ~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~--~~~~~~-h~~~v~~v~~sp~g~~las-~s~dg~i~lwd~~~-- 491 (573)
........+|+|+.+++...++.+++|++...... ...... .......++|+|||+++++ +..++.|.+|+...
T Consensus 141 ~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 220 (347)
T 3hfq_A 141 SHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT 220 (347)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred CCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 00112234577887777777899999998732221 111121 2235788999999996655 56788999998763
Q ss_pred CeE--EEeecCCc------ceEEEEEECCCCCEE-EEEeCCCcEEEEeCCcc---cccccccCcCCCEEEEEEccCCCEE
Q psy2671 492 GKF--ITTLRGHV------QAVYMVAWSSDSRLL-VSGSADSTLKVWNMKTK---KIEQDLPGHGDEVYAVDWAPDGEKV 559 (573)
Q Consensus 492 ~~~--~~~~~~h~------~~v~~v~~s~dg~~l-as~s~D~~v~vwd~~~~---~~~~~l~~h~~~v~~~~~s~d~~~l 559 (573)
++. +..+.... ..+..++|+|||++| ++...++.|.+|++... +.+..+..+...+..++|+|||++|
T Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l 300 (347)
T 3hfq_A 221 GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFV 300 (347)
T ss_dssp TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEE
T ss_pred CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEE
Confidence 543 22332221 458899999999987 45567899999999732 3455566666678899999999999
Q ss_pred EEeeCC-CcEEEcc
Q psy2671 560 ASGGKD-KVLRLWQ 572 (573)
Q Consensus 560 ~s~~~d-~~i~iw~ 572 (573)
++++.+ +.|.+|+
T Consensus 301 ~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 301 VVVNQNTDNATLYA 314 (347)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEEcCCCcEEEEE
Confidence 888765 8899993
No 163
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.82 E-value=1.3e-17 Score=164.60 Aligned_cols=282 Identities=11% Similarity=0.086 Sum_probs=173.2
Q ss_pred CCCeEEEEe----eCCeEEEEEC--CCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC----CcEEEEECCC-
Q psy2671 260 DSKQLVSGC----KNGVIHAWDS--STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD----GAIRIWDVIL- 328 (573)
Q Consensus 260 dg~~l~sgs----~dg~i~vwd~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d----g~v~iwd~~~- 328 (573)
...+++.|+ .++.|.+|++ .+++....... +......++|+| +++++++++.+ +.|++|++..
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~sp-----dg~~l~~~~~~~~~~~~v~~~~~~~~ 85 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSA-----DGKFVYSVNEFSKDQAAVSAFAFDKE 85 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECT-----TSSEEEEEECCSSTTCEEEEEEEETT
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECC-----CCCEEEEEEccCCCCCcEEEEEEeCC
Confidence 334556664 3567888865 44543221111 444455566554 67888888775 7999998765
Q ss_pred -CeE--EEEecCCCccEEEEEECCCcEEEEEe-CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCce
Q psy2671 329 -SQC--VRVLTSHTRSVTCIRWGGSGLIYSAS-QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF 404 (573)
Q Consensus 329 -~~~--~~~~~~h~~~v~~~~~~~~~~l~s~s-~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~ 404 (573)
++. +.....+......+++ +...+++++ .++++.+|++.....+...... +.... .+
T Consensus 86 ~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~------~~~~g----------~~-- 146 (361)
T 3scy_A 86 KGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYSGGSITVFPIGQDGALLPASDV------IEFKG----------SG-- 146 (361)
T ss_dssp TTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEE------EECCC----------CC--
T ss_pred CCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECCCCEEEEEEeCCCCcCccccee------EEccC----------CC--
Confidence 432 3334445556777788 444566555 6899999998754322111000 00000 00
Q ss_pred eeCCCCchhhhhhhhhheeeeCCCCcEEEEEe-CCCeEEEEcCCCCcc------c------eeeeccccccEEEEEECCC
Q psy2671 405 KYDPANPEESSKHALAKYQAQCPEGEKLVSGS-DDFTLFLWNPEKEKK------S------LARMTGHQQLINCVEFSPD 471 (573)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-~dg~i~lwd~~~~~~------~------~~~~~~h~~~v~~v~~sp~ 471 (573)
..+.. ...........+|+|++++++. .++.+++|++..... . ......+......++|+||
T Consensus 147 -~~~~~----~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spd 221 (361)
T 3scy_A 147 -PDKER----QTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSD 221 (361)
T ss_dssp -SCTTT----CSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTT
T ss_pred -CCccc----cCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCC
Confidence 00000 0000011234568888665544 588999998764332 1 1112233455789999999
Q ss_pred CCEEEEee-CCCcEEEEeCCCCeE--EEe---ecCCcceEEEEEECCCCCEEEEEeC--CCcEEEEeCC--ccc--cccc
Q psy2671 472 GRIIASAS-FDKSIKLWDGRIGKF--ITT---LRGHVQAVYMVAWSSDSRLLVSGSA--DSTLKVWNMK--TKK--IEQD 539 (573)
Q Consensus 472 g~~las~s-~dg~i~lwd~~~~~~--~~~---~~~h~~~v~~v~~s~dg~~las~s~--D~~v~vwd~~--~~~--~~~~ 539 (573)
|+++++++ .++.|.+||..+++. +.. ...+......++|+|||++|+++.. ++.|.+|++. +++ .+..
T Consensus 222 g~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~ 301 (361)
T 3scy_A 222 GKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGY 301 (361)
T ss_dssp SSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEE
T ss_pred CCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeE
Confidence 99887776 689999999887754 222 2334455789999999999877665 4899999995 344 3334
Q ss_pred ccCcCCCEEEEEEccCCCEEEEee-CCCcEEEcc
Q psy2671 540 LPGHGDEVYAVDWAPDGEKVASGG-KDKVLRLWQ 572 (573)
Q Consensus 540 l~~h~~~v~~~~~s~d~~~l~s~~-~d~~i~iw~ 572 (573)
+.. ...+.+++|+|||++|++++ .++.|.+|+
T Consensus 302 ~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 302 QLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp EEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred ecC-CCCCceEEECCCCCEEEEEECCCCCEEEEE
Confidence 443 45678999999999998887 568899974
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=1.4e-18 Score=188.15 Aligned_cols=299 Identities=11% Similarity=0.080 Sum_probs=195.1
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCc-----EEEEEEcCCCCeEEEEeeC---------CeEE
Q psy2671 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHW-----VLCIAWSPDSKQLVSGCKN---------GVIH 274 (573)
Q Consensus 209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~-----V~~v~~s~dg~~l~sgs~d---------g~i~ 274 (573)
...+++|+|||++++++ |++|++||+.+++....+.+|... ...++|||||++|+.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 35588999999988886 999999999999877777777543 2347899999999998886 5667
Q ss_pred EEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE-ecCCCccE-----------
Q psy2671 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV-LTSHTRSV----------- 342 (573)
Q Consensus 275 vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~h~~~v----------- 342 (573)
+||+.+++.. .+..|...+....|+| +|+.++.+ .++.|++|++..++..+. ..++...+
T Consensus 96 ~~d~~~~~~~--~l~~~~~~~~~~~~SP-----dG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~e 167 (740)
T 4a5s_A 96 IYDLNKRQLI--TEERIPNNTQWVTWSP-----VGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEE 167 (740)
T ss_dssp EEETTTTEEC--CSSCCCTTEEEEEECS-----STTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHH
T ss_pred EEECCCCcEE--EcccCCCcceeeEECC-----CCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccc
Confidence 9999998753 4566777889999877 67888877 478999999988775543 22333222
Q ss_pred ------EEEEECCCc-EEEEEeCC-CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhh
Q psy2671 343 ------TCIRWGGSG-LIYSASQD-RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEES 414 (573)
Q Consensus 343 ------~~~~~~~~~-~l~s~s~d-~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (573)
..+.|+++| .|+.++.| +.+++|++...... .++...+..+.+..
T Consensus 168 e~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~---~~~~~~~~~~~yp~------------------------ 220 (740)
T 4a5s_A 168 EVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDE---SLQYPKTVRVPYPK------------------------ 220 (740)
T ss_dssp HTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCST---TCSSCEEEEEECCB------------------------
T ss_pred hhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCC---CCCCCcceeecCCC------------------------
Confidence 348899998 46666544 44777764311000 01111111111111
Q ss_pred hhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCC---Ccc-ceeeec------cccccEEEEEECCCCCEEEEee----C
Q psy2671 415 SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEK---EKK-SLARMT------GHQQLINCVEFSPDGRIIASAS----F 480 (573)
Q Consensus 415 ~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~---~~~-~~~~~~------~h~~~v~~v~~sp~g~~las~s----~ 480 (573)
.|.. ....++++||+.+ +.. ....+. +|...+..++|||||++++... .
T Consensus 221 -------------~G~~----~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~ 283 (740)
T 4a5s_A 221 -------------AGAV----NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQN 283 (740)
T ss_dssp -------------TTSC----CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTT
T ss_pred -------------CcCc----CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCC
Confidence 1110 1123688999887 521 122232 3777899999999999776553 2
Q ss_pred CCcEEEEeCCCCe----EEE--ee--cCCcceEE-----EEEECCCCCEEE-EEe-CCC--cEEEEeCCcccccccccCc
Q psy2671 481 DKSIKLWDGRIGK----FIT--TL--RGHVQAVY-----MVAWSSDSRLLV-SGS-ADS--TLKVWNMKTKKIEQDLPGH 543 (573)
Q Consensus 481 dg~i~lwd~~~~~----~~~--~~--~~h~~~v~-----~v~~s~dg~~la-s~s-~D~--~v~vwd~~~~~~~~~l~~h 543 (573)
+..|++||+.+++ +.. .+ .+|...+. ..+|||||+.|+ ..+ .+| .|++||+.+++..+ +...
T Consensus 284 ~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g 362 (740)
T 4a5s_A 284 YSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKG 362 (740)
T ss_dssp EEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCS
T ss_pred EEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-cccC
Confidence 3479999998886 221 22 34554444 678999999877 665 343 58888988766544 3333
Q ss_pred CCCEEEEEEccCCCEEEEee
Q psy2671 544 GDEVYAVDWAPDGEKVASGG 563 (573)
Q Consensus 544 ~~~v~~~~~s~d~~~l~s~~ 563 (573)
.-.|..+. ++|++.|+..+
T Consensus 363 ~~~v~~~~-~~d~~~i~f~~ 381 (740)
T 4a5s_A 363 TWEVIGIE-ALTSDYLYYIS 381 (740)
T ss_dssp SSCEEEEE-EECSSEEEEEE
T ss_pred CEEEEEEE-EEeCCEEEEEE
Confidence 45566653 34566655433
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.81 E-value=6.2e-18 Score=168.56 Aligned_cols=285 Identities=15% Similarity=0.151 Sum_probs=184.3
Q ss_pred CCCCCCcEEE-----EEEcCCCCeEEEEeC-CC--eEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEE
Q psy2671 203 MPGHAEAVIS-----VKFSPNGRSLASGSG-DT--TVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH 274 (573)
Q Consensus 203 ~~gh~~~V~~-----~~fsp~g~~las~s~-d~--~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~ 274 (573)
+..|...... .+|||||++|+.++. ++ .|.+||+.+++......++...+.+++|+|||++|+.++.++.|+
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~ 105 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLM 105 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEE
T ss_pred ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEE
Confidence 4455555555 789999999999887 66 488889999887766667766666778999999999999999999
Q ss_pred EEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEE----------------------eCCCcEEEEECCCCeEE
Q psy2671 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS----------------------GKDGAIRIWDVILSQCV 332 (573)
Q Consensus 275 vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~----------------------~~dg~v~iwd~~~~~~~ 332 (573)
+||+.+++... ....+...+....|. .+++++.++.. +.+..|.+||+.+++..
T Consensus 106 ~~d~~~g~~~~-~~~~~~~~~~~~~~~---~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 181 (388)
T 3pe7_A 106 RVDLATLEENV-VYQVPAEWVGYGTWV---ANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST 181 (388)
T ss_dssp EEETTTCCEEE-EEECCTTEEEEEEEE---ECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE
T ss_pred EEECCCCccee-eeechhhccccccee---ECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE
Confidence 99999886532 223344444434332 13456666532 24467999999888654
Q ss_pred EEecCCCccEEEEEECC-Cc-EEEEEeCC------CeEEEEeCCCCeeeEeccCCc--ceeeEEEeccCceeEEEEcCCC
Q psy2671 333 RVLTSHTRSVTCIRWGG-SG-LIYSASQD------RTIKVWRASDGVMCRTLEGHA--HWVNTLALSTDYLMRVEATSTG 402 (573)
Q Consensus 333 ~~~~~h~~~v~~~~~~~-~~-~l~s~s~d------~~i~vw~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~~~~~~~~~ 402 (573)
.+..+...+..+.|++ ++ .|+..+.+ ..|.+++...+.. ..+..+. ..+..+++
T Consensus 182 -~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~-------------- 245 (388)
T 3pe7_A 182 -VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFW-------------- 245 (388)
T ss_dssp -EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEE--------------
T ss_pred -EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceE--------------
Confidence 3445566789999999 77 45555443 3677777655433 2232222 23333333
Q ss_pred ceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC--C---CeEEEEcCCCCcc-ceeeecccccc---EEEEEECCCCC
Q psy2671 403 GFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD--D---FTLFLWNPEKEKK-SLARMTGHQQL---INCVEFSPDGR 473 (573)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~--d---g~i~lwd~~~~~~-~~~~~~~h~~~---v~~v~~sp~g~ 473 (573)
+|+|+.|+..+. + ..|++||+.++.. .+....++... ...++|+|||+
T Consensus 246 -----------------------spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~ 302 (388)
T 3pe7_A 246 -----------------------VPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGS 302 (388)
T ss_dssp -----------------------CTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEEC
T ss_pred -----------------------CCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCC
Confidence 366776654332 1 2499999987653 22223221110 11237999999
Q ss_pred EEEEe---------eCCCcEEEEeCCCCeEEEeecCCcc-----------eEEEEEECCCCCEEEEEe-CCCcEEEEeC
Q psy2671 474 IIASA---------SFDKSIKLWDGRIGKFITTLRGHVQ-----------AVYMVAWSSDSRLLVSGS-ADSTLKVWNM 531 (573)
Q Consensus 474 ~las~---------s~dg~i~lwd~~~~~~~~~~~~h~~-----------~v~~v~~s~dg~~las~s-~D~~v~vwd~ 531 (573)
.|+.. ..+..|.+||..+++. ..+..|.. .+..++|||||+.|+.++ .++...||.+
T Consensus 303 ~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 303 DAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp CC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 88854 4566899999998765 34444443 467889999999888665 5677777754
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.80 E-value=6.6e-18 Score=180.92 Aligned_cols=302 Identities=11% Similarity=0.035 Sum_probs=191.0
Q ss_pred cCCCccccEEEEEEcCCCCeeEEe--eCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671 105 SMPGHAEAVISVKFSPNGRSLASG--SGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD 182 (573)
Q Consensus 105 ~~~gH~~~V~~l~~s~~~~~lat~--s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (573)
.+.+|...|.+++|++++-++++. +.++..+||....+....+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----------------------------------- 62 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEES----------------------------------- 62 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEE-----------------------------------
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcce-----------------------------------
Confidence 355799999999999988788887 6688999998633221111
Q ss_pred EEEeceeeEEEeeccccccCCCCCCCcEE---------EEEEc--CCCCe-EEEEeC-CCeEEEEECC--C-CeeeEEec
Q psy2671 183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVI---------SVKFS--PNGRS-LASGSG-DTTVRFWDVT--T-QTPLFKCE 246 (573)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~---------~~~fs--p~g~~-las~s~-d~~i~iwd~~--~-~~~~~~~~ 246 (573)
+.+|...+. ...|+ |||+. |+.++. +..|.+|++. + +. ...+.
T Consensus 63 --------------------l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~ 121 (662)
T 3azo_A 63 --------------------ALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLT 121 (662)
T ss_dssp --------------------SSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECS
T ss_pred --------------------eCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEecc
Confidence 111222222 34454 99998 776654 5667777765 2 33 34455
Q ss_pred C-----CCCcEEEEEEcCCCCeEEEEeeC----------CeEEEEECCC------Cceeccccc-CCcccEEEEEecccc
Q psy2671 247 G-----HKHWVLCIAWSPDSKQLVSGCKN----------GVIHAWDSST------GKQIGQPMR-GHKQWITALSWEPFH 304 (573)
Q Consensus 247 ~-----h~~~V~~v~~s~dg~~l~sgs~d----------g~i~vwd~~~------~~~~~~~~~-~h~~~v~~~~~~~~~ 304 (573)
. |...+.+++|||||++|++++.+ ..|++||+.+ +.. ..+. .+...+..+.|+|
T Consensus 122 ~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~Sp-- 197 (662)
T 3azo_A 122 PVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV--RELSDDAHRFVTGPRLSP-- 197 (662)
T ss_dssp CCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS--EESSCSCSSEECCCEECT--
T ss_pred CCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce--eEEEecCCCcccCceECC--
Confidence 4 66788999999999999998877 5899999987 443 2333 4445666666655
Q ss_pred cCCCCCEEEEEeCC--------CcEEEEECC-CC---eEEEEecCCCccEEEEEECCCc-EEEEEeCCC--eEEEEeCCC
Q psy2671 305 LNHQCRRFASSGKD--------GAIRIWDVI-LS---QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDR--TIKVWRASD 369 (573)
Q Consensus 305 ~~~~~~~l~s~~~d--------g~v~iwd~~-~~---~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~--~i~vw~~~~ 369 (573)
++++|+.++.+ ..|++||+. ++ +......+|...+..+.|++++ .+++++.++ .|.+|+..+
T Consensus 198 ---DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~ 274 (662)
T 3azo_A 198 ---DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT 274 (662)
T ss_dssp ---TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTT
T ss_pred ---CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCC
Confidence 78888877755 379999998 56 4444555567889999999887 566777788 555556555
Q ss_pred CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEE--cCC
Q psy2671 370 GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLW--NPE 447 (573)
Q Consensus 370 ~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lw--d~~ 447 (573)
+.......++.. +....++++ .......+++.+++++.. +.+++| |+.
T Consensus 275 ~~~~~l~~~~~~-~~~p~w~~~----------------------------~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~ 324 (662)
T 3azo_A 275 GAATQLCRREEE-FAGPLWTPG----------------------------MRWFAPLANGLIAVVHGK-GAAVLGILDPE 324 (662)
T ss_dssp CCEEESSCCSSB-SSCCCCSTT----------------------------CCSEEECTTSCEEEEEBS-SSCEEEEEETT
T ss_pred Cceeeccccccc-ccCcccccc----------------------------CceEeEeCCCEEEEEEEc-CccEEEEEECC
Confidence 554333222211 100000000 001123467888999988 999999 544
Q ss_pred CCccceeeeccccccEEEE-EECCCCCEEEEeeCCCc--EEEEeCCCCeEEEeecCC
Q psy2671 448 KEKKSLARMTGHQQLINCV-EFSPDGRIIASASFDKS--IKLWDGRIGKFITTLRGH 501 (573)
Q Consensus 448 ~~~~~~~~~~~h~~~v~~v-~~sp~g~~las~s~dg~--i~lwd~~~~~~~~~~~~h 501 (573)
.+ ....+..|...+..+ +++++.-++++++.+.. |.+||..+++.......+
T Consensus 325 ~~--~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~ 379 (662)
T 3azo_A 325 SG--ELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARH 379 (662)
T ss_dssp TT--EEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCC
T ss_pred CC--cEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCC
Confidence 33 256667777777777 55544444555566654 555577777654333334
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=2e-17 Score=163.31 Aligned_cols=259 Identities=10% Similarity=0.072 Sum_probs=154.2
Q ss_pred CeEEEEEC--CCCeee--EEec-CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC-CCceeccc-ccCCcccEEEEEec
Q psy2671 229 TTVRFWDV--TTQTPL--FKCE-GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS-TGKQIGQP-MRGHKQWITALSWE 301 (573)
Q Consensus 229 ~~i~iwd~--~~~~~~--~~~~-~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~-~~~~~~~~-~~~h~~~v~~~~~~ 301 (573)
+.|.+|++ .+++.. .... +....+..++|+|||++|++++.+ .|.+|++. +++..... ...+ .....++
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~-- 89 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRAND-- 89 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGC--
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEE--
Confidence 45666654 444432 1111 233457789999999999999888 99999986 66542110 0000 1111122
Q ss_pred ccccCCCCCE--EEEEe-------------CCCcEEEEECCC-CeEEEEec----CCCccEEEEEECCCc-EEEEEe-CC
Q psy2671 302 PFHLNHQCRR--FASSG-------------KDGAIRIWDVIL-SQCVRVLT----SHTRSVTCIRWGGSG-LIYSAS-QD 359 (573)
Q Consensus 302 ~~~~~~~~~~--l~s~~-------------~dg~v~iwd~~~-~~~~~~~~----~h~~~v~~~~~~~~~-~l~s~s-~d 359 (573)
+++++++ +++++ .+|++++|++.. ++....+. .+...+.+++|++++ .++++. .+
T Consensus 90 ---~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~ 166 (365)
T 1jof_A 90 ---ADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTA 166 (365)
T ss_dssp ---TTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT
T ss_pred ---ECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCC
Confidence 3456664 33442 577788887752 33332222 133445555665555 244333 23
Q ss_pred CeEEEEeCC-CCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671 360 RTIKVWRAS-DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD 438 (573)
Q Consensus 360 ~~i~vw~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 438 (573)
+.|.+|++. ++...
T Consensus 167 ~~v~~~~~~~~g~~~----------------------------------------------------------------- 181 (365)
T 1jof_A 167 NKLWTHRKLASGEVE----------------------------------------------------------------- 181 (365)
T ss_dssp TEEEEEEECTTSCEE-----------------------------------------------------------------
T ss_pred CEEEEEEECCCCCEE-----------------------------------------------------------------
Confidence 455555543 22110
Q ss_pred CeEEEEcCCCCccceeeec--cccccEEEEEECCCCCEEEEeeC-CCcEEEEeCC--CCeEE------Eeec----CCcc
Q psy2671 439 FTLFLWNPEKEKKSLARMT--GHQQLINCVEFSPDGRIIASASF-DKSIKLWDGR--IGKFI------TTLR----GHVQ 503 (573)
Q Consensus 439 g~i~lwd~~~~~~~~~~~~--~h~~~v~~v~~sp~g~~las~s~-dg~i~lwd~~--~~~~~------~~~~----~h~~ 503 (573)
....+. .|...+..++|+|||+++++++. ++.|.+|+.. +++.. ..+. +|..
T Consensus 182 -------------~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~ 248 (365)
T 1jof_A 182 -------------LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDP 248 (365)
T ss_dssp -------------EEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCT
T ss_pred -------------EeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccc
Confidence 011111 12345788999999999888764 7899998754 56542 2232 2222
Q ss_pred ------eEEEEE-ECCCCCEEEEEeCC-C-----cEEEEeCC-cccccc---cccCcCCCEEEEEEcc---CCCEEEEee
Q psy2671 504 ------AVYMVA-WSSDSRLLVSGSAD-S-----TLKVWNMK-TKKIEQ---DLPGHGDEVYAVDWAP---DGEKVASGG 563 (573)
Q Consensus 504 ------~v~~v~-~s~dg~~las~s~D-~-----~v~vwd~~-~~~~~~---~l~~h~~~v~~~~~s~---d~~~l~s~~ 563 (573)
.+..++ |+|||++|++++.+ + +|.+|++. +++... ....+...+..++|+| ||++|++++
T Consensus 249 ~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~ 328 (365)
T 1jof_A 249 ETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITD 328 (365)
T ss_dssp TTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEEC
T ss_pred ccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEE
Confidence 588999 99999998877643 2 89999996 555432 2333444566789999 899999988
Q ss_pred CC-CcEEEcc
Q psy2671 564 KD-KVLRLWQ 572 (573)
Q Consensus 564 ~d-~~i~iw~ 572 (573)
.+ +.|++|+
T Consensus 329 ~~~~~v~v~~ 338 (365)
T 1jof_A 329 DQEGWLEIYR 338 (365)
T ss_dssp SSSCEEEEEE
T ss_pred cCCCeEEEEE
Confidence 75 8999996
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.79 E-value=7.6e-17 Score=158.48 Aligned_cols=266 Identities=12% Similarity=0.086 Sum_probs=168.6
Q ss_pred EEEEcCCCCeEEEEe----------CCCeEEEEECCCCeeeEEecCC------CCcEEEEEEcCCCCeEEEEee--CCeE
Q psy2671 212 SVKFSPNGRSLASGS----------GDTTVRFWDVTTQTPLFKCEGH------KHWVLCIAWSPDSKQLVSGCK--NGVI 273 (573)
Q Consensus 212 ~~~fsp~g~~las~s----------~d~~i~iwd~~~~~~~~~~~~h------~~~V~~v~~s~dg~~l~sgs~--dg~i 273 (573)
.++|+|||++++++. .+++|.+||..+.+.+..+... ......++|+|||++|+++.. ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 789999999998886 3678999999988877665422 234567899999999998875 5799
Q ss_pred EEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC-CeEEEE------ecCCCccEEEEE
Q psy2671 274 HAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-SQCVRV------LTSHTRSVTCIR 346 (573)
Q Consensus 274 ~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~------~~~h~~~v~~~~ 346 (573)
.+||+.+++.+...+... . ...+.+.|. ....+++.+.||.+.+|+... ++.... +..+..++ .+.
T Consensus 134 ~v~d~~~~~~~~~~i~~~-~-~~~v~~~p~----~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~ 206 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAA-G-CWSVIPQPN----RPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIA 206 (361)
T ss_dssp EEEETTTTEEEEEEGGGT-T-EEEEEECTT----SSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSC
T ss_pred EEEECCCCcEEEEEecCC-C-cceeEEcCC----CCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEE
Confidence 999999887653302111 1 111222331 225788889999999998754 433311 11111111 111
Q ss_pred ECCC-cEEEEEeCCCeEEEEeCCCCeee--EeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhee
Q psy2671 347 WGGS-GLIYSASQDRTIKVWRASDGVMC--RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ 423 (573)
Q Consensus 347 ~~~~-~~l~s~s~d~~i~vw~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (573)
..++ ..++..+.++.+.++|+..+... ..+.-...... . ..+.+ .-....
T Consensus 207 ~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~----~--------------~~~~p---------~g~~~~ 259 (361)
T 2oiz_A 207 PALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDK----A--------------KNWVP---------GGYNLV 259 (361)
T ss_dssp CEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHH----H--------------TTCEE---------CCSSCE
T ss_pred ecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccc----c--------------ccccc---------CCeeEE
Confidence 1122 24555667888999887644211 11100000000 0 00000 000012
Q ss_pred eeCCCCcEEEEEeC-----------CCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC
Q psy2671 424 AQCPEGEKLVSGSD-----------DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG 492 (573)
Q Consensus 424 ~~~~~~~~l~sg~~-----------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~ 492 (573)
+.+|++..+..+.. .++|.+||+.+.+ .+..+..+. +.+++|+|||++|++++. ++|.+||..++
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~-~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ-RVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE-EEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc-EEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 33466666555432 3589999988764 455666655 899999999999998886 99999999999
Q ss_pred --eEEEeecCCcceEEEEEECCCCC
Q psy2671 493 --KFITTLRGHVQAVYMVAWSSDSR 515 (573)
Q Consensus 493 --~~~~~~~~h~~~v~~v~~s~dg~ 515 (573)
+.+..+..+......++++|||+
T Consensus 336 ~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 336 EPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SCEEEEEETTSCSSEEEEEECCCSC
T ss_pred cceeeEEeccCCCCcEEEEecCCCC
Confidence 99988866666778899999986
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.77 E-value=5.6e-17 Score=173.65 Aligned_cols=285 Identities=14% Similarity=0.065 Sum_probs=191.9
Q ss_pred CCCCCCcEEEEEEcCCCCeEEEE--eCCCeEEEEECCCCeeeEEecCCCCcEE---------EEEEc--CCCCe-EEEEe
Q psy2671 203 MPGHAEAVISVKFSPNGRSLASG--SGDTTVRFWDVTTQTPLFKCEGHKHWVL---------CIAWS--PDSKQ-LVSGC 268 (573)
Q Consensus 203 ~~gh~~~V~~~~fsp~g~~las~--s~d~~i~iwd~~~~~~~~~~~~h~~~V~---------~v~~s--~dg~~-l~sgs 268 (573)
+.+|...+..++|++++-++++. +.++...||....+.....+..|...+. ...|+ |||++ |+.++
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~ 98 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH 98 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEB
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEE
Confidence 44688999999999887677777 5688999999654444566666765555 56665 99998 77654
Q ss_pred e-CCeEEEEECC--C-CceecccccC-----CcccEEEEEecccccCCCCCEEEEEeCC----------CcEEEEECCC-
Q psy2671 269 K-NGVIHAWDSS--T-GKQIGQPMRG-----HKQWITALSWEPFHLNHQCRRFASSGKD----------GAIRIWDVIL- 328 (573)
Q Consensus 269 ~-dg~i~vwd~~--~-~~~~~~~~~~-----h~~~v~~~~~~~~~~~~~~~~l~s~~~d----------g~v~iwd~~~- 328 (573)
. +..|.+|++. . +.. ..+.. |...+..++|+| +++.|+.++.+ ..|++||+..
T Consensus 99 ~~~~~l~~~~~~~~g~~~~--~~l~~~~~~~~~~~~~~~~~sp-----Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 171 (662)
T 3azo_A 99 FGDQRLYAFEPDAPGGAVP--RPLTPVSAVGGGLRWADPVLLP-----ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGS 171 (662)
T ss_dssp TTTCCEEEECTTSTTCCCC--EECSCCCCSTTCEEEEEEEEET-----TTTEEEEEEEEECSSSTTCEEEEEEEEETTST
T ss_pred CCCCeEEEEcCCCCCCCCC--EeccCCccCCCCccccCcEECC-----CCCEEEEEEecccCCCCCCceeEEEEEECCCC
Confidence 4 5667777775 2 432 22333 566788888876 67889888776 5899999987
Q ss_pred -----CeEEEEec-CCCccEEEEEECCCc-EEEEEeCC--------CeEEEEeCC-CC---eeeEeccCCcceeeEEEec
Q psy2671 329 -----SQCVRVLT-SHTRSVTCIRWGGSG-LIYSASQD--------RTIKVWRAS-DG---VMCRTLEGHAHWVNTLALS 389 (573)
Q Consensus 329 -----~~~~~~~~-~h~~~v~~~~~~~~~-~l~s~s~d--------~~i~vw~~~-~~---~~~~~~~~~~~~v~~~~~s 389 (573)
+.. ..+. .+...+..+.|+++| .|+.++.+ ..|.+|++. ++ .......+|...+..++++
T Consensus 172 ~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s 250 (662)
T 3azo_A 172 AAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA 250 (662)
T ss_dssp TTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC
T ss_pred ccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC
Confidence 544 4455 556778889999998 56666644 379999998 56 3333333344444444444
Q ss_pred cCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC--eEEEEcCCCCccceeeec-ccccc----
Q psy2671 390 TDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF--TLFLWNPEKEKKSLARMT-GHQQL---- 462 (573)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg--~i~lwd~~~~~~~~~~~~-~h~~~---- 462 (573)
|+|++++++..++ .|.+||+.++. ...+. .+...
T Consensus 251 -------------------------------------pdg~l~~~~~~~~~~~l~~~~~~~~~--~~~l~~~~~~~~~p~ 291 (662)
T 3azo_A 251 -------------------------------------PDGSLIVATDRTGWWNLHRVDPATGA--ATQLCRREEEFAGPL 291 (662)
T ss_dssp -------------------------------------TTSCEEEEECTTSSCEEEEECTTTCC--EEESSCCSSBSSCCC
T ss_pred -------------------------------------CCCeEEEEECCCCCeEEEEEECCCCc--eeecccccccccCcc
Confidence 5677777777787 66777764432 22222 22221
Q ss_pred ----EEEEEECCCCCEEEEeeCCCcEEEE--eCCCCeEEEeecCCcceEEEE-EECCCCCEEEEEeCCCc--EEEEeCCc
Q psy2671 463 ----INCVEFSPDGRIIASASFDKSIKLW--DGRIGKFITTLRGHVQAVYMV-AWSSDSRLLVSGSADST--LKVWNMKT 533 (573)
Q Consensus 463 ----v~~v~~sp~g~~las~s~dg~i~lw--d~~~~~~~~~~~~h~~~v~~v-~~s~dg~~las~s~D~~--v~vwd~~~ 533 (573)
+.+++|+|+++++++++. +.++|| |..+++ +..+..|...+..+ +++++.-++++++.+.. |.+||+.+
T Consensus 292 w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~ 369 (662)
T 3azo_A 292 WTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVT 369 (662)
T ss_dssp CSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTT
T ss_pred ccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 467899999999999998 999999 666665 67787787777776 55443334445565654 55556666
Q ss_pred ccc
Q psy2671 534 KKI 536 (573)
Q Consensus 534 ~~~ 536 (573)
++.
T Consensus 370 g~~ 372 (662)
T 3azo_A 370 GRA 372 (662)
T ss_dssp CCE
T ss_pred Cce
Confidence 654
No 170
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.76 E-value=2.2e-17 Score=164.99 Aligned_cols=295 Identities=10% Similarity=0.049 Sum_probs=183.0
Q ss_pred ccccEEEEEEcCCCCeeEEeeC---CCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEE
Q psy2671 109 HAEAVISVKFSPNGRSLASGSG---DTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVY 185 (573)
Q Consensus 109 H~~~V~~l~~s~~~~~lat~s~---D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (573)
|...+.+++|||||++||.++. +..|.+||+.+++....
T Consensus 34 ~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l-------------------------------------- 75 (396)
T 3c5m_A 34 HRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQL-------------------------------------- 75 (396)
T ss_dssp ECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEEC--------------------------------------
T ss_pred cceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEe--------------------------------------
Confidence 3344667789999999887754 34688888876642100
Q ss_pred eceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEE
Q psy2671 186 QKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265 (573)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~ 265 (573)
..++......+.|||||++|+.++.++.|.+||+.+++.......+.. |+++|+.|+
T Consensus 76 -----------------~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~------~~~~g~~l~ 132 (396)
T 3c5m_A 76 -----------------TEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEE------WKGYGTWVA 132 (396)
T ss_dssp -----------------CCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT------EEEEEEEEE
T ss_pred -----------------ecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccc------cCCCCCEEE
Confidence 011111122367999999999999999999999998876554444443 677888888
Q ss_pred EEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEE-----eCCCcEEEEECCCCeEEEEecCCCc
Q psy2671 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS-----GKDGAIRIWDVILSQCVRVLTSHTR 340 (573)
Q Consensus 266 sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~-----~~dg~v~iwd~~~~~~~~~~~~h~~ 340 (573)
..+.+....+|... . ..+++++.++.. ..+..|.+||+.+++..... .+..
T Consensus 133 ~~~~~~~~~~~~~~------------------~-----~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~ 188 (396)
T 3c5m_A 133 NSDCTKLVGIEILK------------------R-----DWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTA 188 (396)
T ss_dssp CTTSSEEEEEEEEG------------------G-----GCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESS
T ss_pred eccCCccccccccc------------------c-----ccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCc
Confidence 77766666665410 0 011233333322 34567899999887655443 4566
Q ss_pred cEEEEEECC-Cc-EEEEEeCC------CeEEEEeCCCCeeeEeccCC-cceeeEEEeccCceeEEEEcCCCceeeCCCCc
Q psy2671 341 SVTCIRWGG-SG-LIYSASQD------RTIKVWRASDGVMCRTLEGH-AHWVNTLALSTDYLMRVEATSTGGFKYDPANP 411 (573)
Q Consensus 341 ~v~~~~~~~-~~-~l~s~s~d------~~i~vw~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 411 (573)
.+..+.|++ ++ .++..+.+ ..|.+|++..+......... ...+..+++
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~----------------------- 245 (396)
T 3c5m_A 189 WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFW----------------------- 245 (396)
T ss_dssp CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEE-----------------------
T ss_pred ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEE-----------------------
Confidence 788999998 55 45555443 35777887654432222211 112333333
Q ss_pred hhhhhhhhhheeeeCCCCcEEEEEeCC-----CeEEEEcCCCCccc-eeeeccccccEEEEEECC-CCCEEEEee-----
Q psy2671 412 EESSKHALAKYQAQCPEGEKLVSGSDD-----FTLFLWNPEKEKKS-LARMTGHQQLINCVEFSP-DGRIIASAS----- 479 (573)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~l~sg~~d-----g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp-~g~~las~s----- 479 (573)
+|+|+.|+.++.+ +.|++||+.++... +....+ .. +.|+| ||++++.++
T Consensus 246 --------------spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~ 306 (396)
T 3c5m_A 246 --------------IPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP----CS-HLMSNFDGSLMVGDGCDAPV 306 (396)
T ss_dssp --------------CTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS----EE-EEEECSSSSEEEEEECCC--
T ss_pred --------------CCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC----CC-CCccCCCCceEEEecCCcce
Confidence 3667766666543 45999998765432 111211 23 88999 999988765
Q ss_pred -----------CCCcEEEEeCCCCeEEEeecCCcc-----------eEEEEEECCCCCEEEEEeC-CCcEEEEeC
Q psy2671 480 -----------FDKSIKLWDGRIGKFITTLRGHVQ-----------AVYMVAWSSDSRLLVSGSA-DSTLKVWNM 531 (573)
Q Consensus 480 -----------~dg~i~lwd~~~~~~~~~~~~h~~-----------~v~~v~~s~dg~~las~s~-D~~v~vwd~ 531 (573)
.++.|.+||..+++. ..+..+.. .+..++|+|||+.|+.++. ++...+|.+
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 307 DVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp --------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred eeccccccccCCCCcEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 347899999988764 23333332 1456789999998887664 555555544
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.76 E-value=2.8e-17 Score=164.21 Aligned_cols=290 Identities=14% Similarity=0.101 Sum_probs=178.4
Q ss_pred EEECCCCeeeEEecCCCCc-----EEEEEEcCCCCeEEEEeeC---CeEEEEECCCCceecccccCCcccEEEEEecccc
Q psy2671 233 FWDVTTQTPLFKCEGHKHW-----VLCIAWSPDSKQLVSGCKN---GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304 (573)
Q Consensus 233 iwd~~~~~~~~~~~~h~~~-----V~~v~~s~dg~~l~sgs~d---g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~ 304 (573)
..|..++..+..+..+... +.+++|||||++|+..... ..|.+||+.+++.. ....++........|
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~---- 88 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV-QLTEGKGDNTFGGFI---- 88 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE-ECCCSSCBCTTTCEE----
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE-EeecCCCCccccceE----
Confidence 3466666666666554333 6778999999998876543 47889999887643 222222211111334
Q ss_pred cCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEE---E----------------EECCCcE-EEEE-----eCC
Q psy2671 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC---I----------------RWGGSGL-IYSA-----SQD 359 (573)
Q Consensus 305 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~---~----------------~~~~~~~-l~s~-----s~d 359 (573)
+++++.|+.++.++.|++||+..++.......+...... + .|++++. ++.. ..+
T Consensus 89 -spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~ 167 (396)
T 3c5m_A 89 -STDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPT 167 (396)
T ss_dssp -CTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCC
T ss_pred -CCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCc
Confidence 447889999999999999999888766555544432222 1 2333331 1111 355
Q ss_pred CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC-
Q psy2671 360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD- 438 (573)
Q Consensus 360 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d- 438 (573)
..|.+||+.++...... .+...+..+.++++ ++..++..+.+
T Consensus 168 ~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~------------------------------------dg~~l~~~~~~~ 210 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIH-QDTAWLGHPIYRPF------------------------------------DDSTVGFCHEGP 210 (396)
T ss_dssp EEEEEEETTTCCEEEEE-EESSCEEEEEEETT------------------------------------EEEEEEEEECSC
T ss_pred ceEEEEECCCCcEEeec-cCCcccccceECCC------------------------------------CCCEEEEEecCC
Confidence 67888888776543322 23333444444430 34445444432
Q ss_pred -----CeEEEEcCCCCccceeeeccc--cccEEEEEECCCCCEEEEeeCC-----CcEEEEeCCCCeEEEeecCCcceEE
Q psy2671 439 -----FTLFLWNPEKEKKSLARMTGH--QQLINCVEFSPDGRIIASASFD-----KSIKLWDGRIGKFITTLRGHVQAVY 506 (573)
Q Consensus 439 -----g~i~lwd~~~~~~~~~~~~~h--~~~v~~v~~sp~g~~las~s~d-----g~i~lwd~~~~~~~~~~~~h~~~v~ 506 (573)
..|.+|++.... ...+..+ ...+..++|+|||+.|+.++.+ +.|++||+.+++........ ...
T Consensus 211 ~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~~ 286 (396)
T 3c5m_A 211 HDLVDARMWLVNEDGSN--VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--PCS 286 (396)
T ss_dssp SSSCSCCCEEEETTSCC--CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--SEE
T ss_pred CCCCCceEEEEECCCCc--eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--CCC
Confidence 357788875432 1222222 2357889999999988777544 44999999888653322211 122
Q ss_pred EEEECC-CCCEEEEEe----------------CCCcEEEEeCCcccccccccCcCC-----------CEEEEEEccCCCE
Q psy2671 507 MVAWSS-DSRLLVSGS----------------ADSTLKVWNMKTKKIEQDLPGHGD-----------EVYAVDWAPDGEK 558 (573)
Q Consensus 507 ~v~~s~-dg~~las~s----------------~D~~v~vwd~~~~~~~~~l~~h~~-----------~v~~~~~s~d~~~ 558 (573)
++|+| ||++++.++ .+..|++||+.+++.. .+..+.. .+..+.|+|||++
T Consensus 287 -~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 364 (396)
T 3c5m_A 287 -HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDG 364 (396)
T ss_dssp -EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSE
T ss_pred -CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCe
Confidence 88999 999988765 3478999999887643 3444443 2566789999999
Q ss_pred EEEeeC-CCcEEEc
Q psy2671 559 VASGGK-DKVLRLW 571 (573)
Q Consensus 559 l~s~~~-d~~i~iw 571 (573)
|+.++. ++...+|
T Consensus 365 l~~~s~~~~~~~l~ 378 (396)
T 3c5m_A 365 VLFTSDFEGVPAIY 378 (396)
T ss_dssp EEEEECTTSSCEEE
T ss_pred EEEEecCCCCceEE
Confidence 887764 5565665
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.75 E-value=2.7e-15 Score=142.63 Aligned_cols=242 Identities=14% Similarity=0.207 Sum_probs=164.4
Q ss_pred CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEec------CCCCcEEEEEE-cCCCCeEEEEee-CCeE
Q psy2671 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE------GHKHWVLCIAW-SPDSKQLVSGCK-NGVI 273 (573)
Q Consensus 202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~------~h~~~V~~v~~-s~dg~~l~sgs~-dg~i 273 (573)
...+|...+.+++++|+|+.+++.+.++.|.+||.. ++.+..+. +|...+.++++ .+++..+++... ++.|
T Consensus 24 ~~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 24 VMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp SSTTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CCCCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 345778889999999999988888889999999987 44444442 34457899999 567765555533 8999
Q ss_pred EEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec--CCCccEEEEEECCCc
Q psy2671 274 HAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT--SHTRSVTCIRWGGSG 351 (573)
Q Consensus 274 ~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~ 351 (573)
.+|| .+++.+......+...+.++++.| +++.+++...++.|++||.. ++....+. .+...+.++++++++
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~-----~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g 175 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDN-----KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQ 175 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECT-----TSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSS
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeC-----CCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCC
Confidence 9999 455544332223445677777655 56677777778889999854 44444332 333456667776665
Q ss_pred EEEEE-eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc
Q psy2671 352 LIYSA-SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE 430 (573)
Q Consensus 352 ~l~s~-s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (573)
.++.+ +.++.|.+|+.. +..
T Consensus 176 ~l~v~~~~~~~i~~~~~~-g~~---------------------------------------------------------- 196 (286)
T 1q7f_A 176 EIFISDNRAHCVKVFNYE-GQY---------------------------------------------------------- 196 (286)
T ss_dssp EEEEEEGGGTEEEEEETT-CCE----------------------------------------------------------
T ss_pred CEEEEECCCCEEEEEcCC-CCE----------------------------------------------------------
Confidence 44433 345666666542 111
Q ss_pred EEEEEeCCCeEEEEcCCCCccceeeec--cccccEEEEEECCCCCEEEEeeCCC-cEEEEeCCCCeEEEeecCCc--ceE
Q psy2671 431 KLVSGSDDFTLFLWNPEKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDK-SIKLWDGRIGKFITTLRGHV--QAV 505 (573)
Q Consensus 431 ~l~sg~~dg~i~lwd~~~~~~~~~~~~--~h~~~v~~v~~sp~g~~las~s~dg-~i~lwd~~~~~~~~~~~~h~--~~v 505 (573)
+..+. ++...+..++++|+|+++++...++ .|.+||. .++.+..+..+. ..+
T Consensus 197 ----------------------~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~ 253 (286)
T 1q7f_A 197 ----------------------LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQC 253 (286)
T ss_dssp ----------------------EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCE
T ss_pred ----------------------EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcc
Confidence 11111 1123577899999999999888776 9999995 566666665443 347
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTK 534 (573)
Q Consensus 506 ~~v~~s~dg~~las~s~D~~v~vwd~~~~ 534 (573)
..++++|+|+++++ +.|++|++|++...
T Consensus 254 ~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 254 FDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred eeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 79999999987777 57999999998653
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.75 E-value=1.4e-15 Score=147.66 Aligned_cols=244 Identities=12% Similarity=0.113 Sum_probs=166.9
Q ss_pred CCcEEEEEEcCCCCeEEEEeCC------------------------CeEEEEECCCCeeeEEec-CCCCcEEEEEEcCCC
Q psy2671 207 AEAVISVKFSPNGRSLASGSGD------------------------TTVRFWDVTTQTPLFKCE-GHKHWVLCIAWSPDS 261 (573)
Q Consensus 207 ~~~V~~~~fsp~g~~las~s~d------------------------~~i~iwd~~~~~~~~~~~-~h~~~V~~v~~s~dg 261 (573)
.+.+.+++++|+|+.+++.+.+ ++|.+||..+++.+.... ++-.....++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999999888877 479999998887765543 455678999999999
Q ss_pred CeEEEEeeCCeEEEEECCCCc-eecccc--------cCCcccEEEEEecccccCCCCCEEEEEe-CCCcEEEEECCCCeE
Q psy2671 262 KQLVSGCKNGVIHAWDSSTGK-QIGQPM--------RGHKQWITALSWEPFHLNHQCRRFASSG-KDGAIRIWDVILSQC 331 (573)
Q Consensus 262 ~~l~sgs~dg~i~vwd~~~~~-~~~~~~--------~~h~~~v~~~~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~ 331 (573)
+.+++...++.|++||..... .+...- .++-.....+++.|. +++.+++.+ .++.|++|+ ..+..
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~----~g~lyv~d~~~~~~I~~~~-~~g~~ 177 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPS----TGAVFVSDGYCNSRIVQFS-PSGKF 177 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTT----TCCEEEEECSSCCEEEEEC-TTSCE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCC----CCeEEEEeCCCCCeEEEEc-CCCCE
Confidence 988888889999999986542 111110 233446778887652 456777776 689999999 45555
Q ss_pred EEEecC----------CCccEEEEEECCC-cEEE-EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEc
Q psy2671 332 VRVLTS----------HTRSVTCIRWGGS-GLIY-SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT 399 (573)
Q Consensus 332 ~~~~~~----------h~~~v~~~~~~~~-~~l~-s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~ 399 (573)
+..+.. +......++++++ +.++ +...++.|++|+..+|..+..+..
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~--------------------- 236 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH--------------------- 236 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC---------------------
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec---------------------
Confidence 554431 1122555666554 4333 333455566665544433322210
Q ss_pred CCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC------CCC
Q psy2671 400 STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP------DGR 473 (573)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp------~g~ 473 (573)
..+...+..++|+| +|+
T Consensus 237 ---------------------------------------------------------~~~~~~~~~~~~~pg~~~~~~g~ 259 (329)
T 3fvz_A 237 ---------------------------------------------------------ASFGRNVFAISYIPGFLFAVNGK 259 (329)
T ss_dssp ---------------------------------------------------------TTTTTCEEEEEEETTEEEEEECC
T ss_pred ---------------------------------------------------------cccCCCcceeeecCCEEEEeCCC
Confidence 12233456667777 444
Q ss_pred EEEEeeCCCcEEEEeCCCCeEEEee---cCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Q psy2671 474 IIASASFDKSIKLWDGRIGKFITTL---RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533 (573)
Q Consensus 474 ~las~s~dg~i~lwd~~~~~~~~~~---~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~ 533 (573)
..++...+..|++||..+++.+..+ .++......++++|+|.++++...++.|++|++..
T Consensus 260 ~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 4444445668999999999988887 46777789999999998888888999999999864
No 174
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.74 E-value=1.3e-16 Score=157.47 Aligned_cols=249 Identities=10% Similarity=0.070 Sum_probs=162.7
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEECC-CCeeeEEec--CCCCcEEEEEEcCCCCe--EEEEe-------------e
Q psy2671 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVT-TQTPLFKCE--GHKHWVLCIAWSPDSKQ--LVSGC-------------K 269 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~-~~~~~~~~~--~h~~~V~~v~~s~dg~~--l~sgs-------------~ 269 (573)
..+..++|+|+|++|++++.+ .|.+|++. +++...... .+. ...+++|+|||++ ++++. .
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g-~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGG-HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCS-SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCC-CCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 456789999999999999888 99999987 676543222 112 2456899999994 55653 6
Q ss_pred CCeEEEEECCC-Cceeccccc----CCcccEEEEEecccccCCCCCEEEEEe-CCCcEEEEECC-CCeEE--EEec--CC
Q psy2671 270 NGVIHAWDSST-GKQIGQPMR----GHKQWITALSWEPFHLNHQCRRFASSG-KDGAIRIWDVI-LSQCV--RVLT--SH 338 (573)
Q Consensus 270 dg~i~vwd~~~-~~~~~~~~~----~h~~~v~~~~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~-~~~~~--~~~~--~h 338 (573)
+|.+.+|++.. ++... .+. .+...+.++.|.| +++++++++ .++.|++|++. +++.. ..+. .|
T Consensus 118 ~g~v~v~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~sp-----dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~ 191 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEK-NVQNYEYQENTGIHGMVFDP-----TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP 191 (365)
T ss_dssp CCEEEEEEECTTCCEEE-EEEEEECCTTCCEEEEEECT-----TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST
T ss_pred CceEEEEccCCCCcCcc-eEeeEEeCCCCcceEEEECC-----CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCC
Confidence 89999999873 54321 111 2445678888776 667777665 46899999997 56543 2232 23
Q ss_pred CccEEEEEECCCc-EEEEEeC-CCeEEEEeCC--CCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhh
Q psy2671 339 TRSVTCIRWGGSG-LIYSASQ-DRTIKVWRAS--DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEES 414 (573)
Q Consensus 339 ~~~v~~~~~~~~~-~l~s~s~-d~~i~vw~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (573)
...+..++|++++ .+++++. ++++.+|+.. ++.......
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~------------------------------------- 234 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHH------------------------------------- 234 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE-------------------------------------
T ss_pred CCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccc-------------------------------------
Confidence 5568888888887 5666554 6788888653 222110000
Q ss_pred hhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccc------cEEEEE-ECCCCCEEEEeeCCC-----
Q psy2671 415 SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ------LINCVE-FSPDGRIIASASFDK----- 482 (573)
Q Consensus 415 ~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~------~v~~v~-~sp~g~~las~s~dg----- 482 (573)
. +-.+.. ...+|.. .+..++ |+|||++|+++..+.
T Consensus 235 -------------------------~--~~~~~~------~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~ 281 (365)
T 1jof_A 235 -------------------------S--FPLIPP------GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQ 281 (365)
T ss_dssp -------------------------E--EESSCT------TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSC
T ss_pred -------------------------e--EEcCCC------CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCC
Confidence 0 000000 0012222 478899 999999888765432
Q ss_pred -cEEEEeCC-CCeEEE---eecCCcceEEEEEECC---CCCEEEEEeCC-CcEEEEeCCcc
Q psy2671 483 -SIKLWDGR-IGKFIT---TLRGHVQAVYMVAWSS---DSRLLVSGSAD-STLKVWNMKTK 534 (573)
Q Consensus 483 -~i~lwd~~-~~~~~~---~~~~h~~~v~~v~~s~---dg~~las~s~D-~~v~vwd~~~~ 534 (573)
.|.+|++. +++... ....+......++|+| ||++|++++.+ +.|++|++...
T Consensus 282 ~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 282 GYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999985 566443 2333444456789999 89999999864 89999998765
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.74 E-value=3e-15 Score=146.63 Aligned_cols=270 Identities=12% Similarity=0.131 Sum_probs=178.1
Q ss_pred CcEEEEEEcCCCCeEEEEe---------CCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC---C--eE
Q psy2671 208 EAVISVKFSPNGRSLASGS---------GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN---G--VI 273 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las~s---------~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d---g--~i 273 (573)
..+...++ ||++++... .++.|.+||+.+++... + ..+.+++|||||++|+.++.+ + .|
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceE
Confidence 45677778 898887652 26789999998876532 3 457889999999999987764 3 47
Q ss_pred EEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeC---------------------------CCcEEEEEC
Q psy2671 274 HAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK---------------------------DGAIRIWDV 326 (573)
Q Consensus 274 ~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~---------------------------dg~v~iwd~ 326 (573)
.+|++.+++... +..+.. +..+.|.| +++.|+.++. ...|.+||+
T Consensus 88 ~~~~~~~g~~~~--l~~~~~-~~~~~wsp-----dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~ 159 (347)
T 2gop_A 88 WVADLETLSSKK--ILEAKN-IRSLEWNE-----DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDT 159 (347)
T ss_dssp EEEETTTTEEEE--EEEESE-EEEEEECT-----TSSEEEEEEECCCC---------CCCC---------CEEEEEEEET
T ss_pred EEEECCCCceEE--EEcCCC-ccceeECC-----CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEEC
Confidence 888888775432 222223 78888876 6677777653 256899999
Q ss_pred CCCeEEEEecCCCccEEEEEECCCcEEEEEeCCC-------eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEc
Q psy2671 327 ILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR-------TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT 399 (573)
Q Consensus 327 ~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~-------~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~ 399 (573)
.+++.++.+.. . .+..+.|++++.+++++.+. ...+|.+.++.. ..+..+ ..+..
T Consensus 160 ~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~-------------- 221 (347)
T 2gop_A 160 ESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYA-------------- 221 (347)
T ss_dssp TTTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEE--------------
T ss_pred CCCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCce-EEeccC-cceee--------------
Confidence 88876444544 3 77889999999666665542 345554433332 111111 11110
Q ss_pred CCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC--------CeEEEEcCCCCccceeeeccccccEEE-EEECC
Q psy2671 400 STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD--------FTLFLWNPEKEKKSLARMTGHQQLINC-VEFSP 470 (573)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d--------g~i~lwd~~~~~~~~~~~~~h~~~v~~-v~~sp 470 (573)
.+|+|+.++.++.+ ..|.+|| ++ .......++...+.. +.|+
T Consensus 222 -------------------------~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~-~~~~l~~~~~~~~~~~~~~s- 272 (347)
T 2gop_A 222 -------------------------VDSDGERILLYGKPEKKYMSEHNKLYIYD--GK-EVMGILDEVDRGVGQAKIKD- 272 (347)
T ss_dssp -------------------------EEECSSCEEEEECCSSSCCCSSCEEEEEC--SS-CEEESSTTCCSEEEEEEEET-
T ss_pred -------------------------ECCCCCEEEEEEccccCCccccceEEEEC--CC-ceEeccccCCcccCCccEEc-
Confidence 13677777776644 3688888 22 222333455667876 9999
Q ss_pred CCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcE-EEEeCCcccccccccCcCCC
Q psy2671 471 DGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTL-KVWNMKTKKIEQDLPGHGDE 546 (573)
Q Consensus 471 ~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v-~vwd~~~~~~~~~l~~h~~~ 546 (573)
|| ++++++.++.++|| ..+++....+ .+...|.+++|+| .++++++.++.. .+|.+. ++ ...+..|+..
T Consensus 273 dg-~~~~~~~~~~~~l~-~~~g~~~~~~-~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~ 342 (347)
T 2gop_A 273 GK-VYFTLFEEGSVNLY-IWDGEIKPIA-KGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDP 342 (347)
T ss_dssp TE-EEEEEEETTEEEEE-EESSSEEEEE-CSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTST
T ss_pred Cc-EEEEEecCCcEEEE-EcCCceEEEe-cCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHh
Confidence 88 99999999999999 7766654433 4467899999999 677777777664 777776 44 3445555543
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.72 E-value=1.2e-14 Score=138.00 Aligned_cols=234 Identities=15% Similarity=0.239 Sum_probs=166.9
Q ss_pred CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec------CCCccEEEEEE-CCCcEEEEEeC--CC
Q psy2671 290 GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT------SHTRSVTCIRW-GGSGLIYSASQ--DR 360 (573)
Q Consensus 290 ~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~------~h~~~v~~~~~-~~~~~l~s~s~--d~ 360 (573)
++-....++++.+ +++.+++...++.|++||.. ++....+. +|...+..+++ .+++.++.+.. ++
T Consensus 27 g~~~~p~~v~~~~-----~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~ 100 (286)
T 1q7f_A 27 GQFTEPSGVAVNA-----QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTH 100 (286)
T ss_dssp TCBSCEEEEEECT-----TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGC
T ss_pred CccCCCceEEECC-----CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCC
Confidence 4445677777654 56778888889999999987 55555443 24457889999 57777777664 89
Q ss_pred eEEEEeCCCCeeeEeccC-CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671 361 TIKVWRASDGVMCRTLEG-HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF 439 (573)
Q Consensus 361 ~i~vw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 439 (573)
.|.+|+ .++.....+.. +......+++ .++|.++++...++
T Consensus 101 ~i~~~d-~~g~~~~~~~~~~~~~~~~i~~-------------------------------------~~~g~l~v~~~~~~ 142 (286)
T 1q7f_A 101 QIQIYN-QYGQFVRKFGATILQHPRGVTV-------------------------------------DNKGRIIVVECKVM 142 (286)
T ss_dssp EEEEEC-TTSCEEEEECTTTCSCEEEEEE-------------------------------------CTTSCEEEEETTTT
T ss_pred EEEEEC-CCCcEEEEecCccCCCceEEEE-------------------------------------eCCCCEEEEECCCC
Confidence 999999 55655544422 2222333333 25677777777889
Q ss_pred eEEEEcCCCCccceeeec--cccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC--cceEEEEEECCCCC
Q psy2671 440 TLFLWNPEKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAWSSDSR 515 (573)
Q Consensus 440 ~i~lwd~~~~~~~~~~~~--~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h--~~~v~~v~~s~dg~ 515 (573)
.|++||.... ....+. ++...+..++++|+|+++++.+.++.|++||. .++.+..+..+ ......++++++|+
T Consensus 143 ~i~~~~~~g~--~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~ 219 (286)
T 1q7f_A 143 RVIIFDQNGN--VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGE 219 (286)
T ss_dssp EEEEECTTSC--EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCC
T ss_pred EEEEEcCCCC--EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCC
Confidence 9999996532 222222 34456899999999998888888999999997 45666666433 35788999999999
Q ss_pred EEEEEeCCC-cEEEEeCCcccccccccCcC--CCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 516 LLVSGSADS-TLKVWNMKTKKIEQDLPGHG--DEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 516 ~las~s~D~-~v~vwd~~~~~~~~~l~~h~--~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
++++...++ .|++|+.. ++.+..+..+. ..+.+++++|+|+.+++ +.|++|++|+
T Consensus 220 l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~ 277 (286)
T 1q7f_A 220 ILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYR 277 (286)
T ss_dssp EEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEE
T ss_pred EEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEE
Confidence 988888886 99999964 45555554433 34789999999987666 6799999997
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=3e-15 Score=145.39 Aligned_cols=248 Identities=10% Similarity=0.113 Sum_probs=173.6
Q ss_pred CCcEEEEEEcCCCCeEEEEeeC------------------------CeEEEEECCCCceecccccCCcccEEEEEecccc
Q psy2671 249 KHWVLCIAWSPDSKQLVSGCKN------------------------GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304 (573)
Q Consensus 249 ~~~V~~v~~s~dg~~l~sgs~d------------------------g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~ 304 (573)
-..+.+|+++|+|+.+++.+.+ +.|.+||..+++.......++-....++++.|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~-- 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT-- 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT--
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC--
Confidence 3568999999999988877776 47999999888765433334445677887764
Q ss_pred cCCCCCEEEEEeCCCcEEEEECCCCe-EEEEe---------cCCCccEEEEEECC-CcEEEEEe--CCCeEEEEeCCCCe
Q psy2671 305 LNHQCRRFASSGKDGAIRIWDVILSQ-CVRVL---------TSHTRSVTCIRWGG-SGLIYSAS--QDRTIKVWRASDGV 371 (573)
Q Consensus 305 ~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~---------~~h~~~v~~~~~~~-~~~l~s~s--~d~~i~vw~~~~~~ 371 (573)
+++.+++...++.|+.||..... .+..+ ..+......+++++ ++.++.+. .++.|++|+. +|.
T Consensus 101 ---~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~ 176 (329)
T 3fvz_A 101 ---DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGK 176 (329)
T ss_dssp ---TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSC
T ss_pred ---CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCC
Confidence 66788888889999999975442 33433 23444677888876 56555444 4777887773 333
Q ss_pred eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcc
Q psy2671 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK 451 (573)
Q Consensus 372 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~ 451 (573)
....+.. .+ .+ +.
T Consensus 177 ~~~~~~~--------------------------------------------------------~g-~~-----~~----- 189 (329)
T 3fvz_A 177 FVTQWGE--------------------------------------------------------ES-SG-----SS----- 189 (329)
T ss_dssp EEEEECE--------------------------------------------------------EC-CS-----SS-----
T ss_pred EEEEecc--------------------------------------------------------CC-CC-----CC-----
Confidence 2221110 00 00 00
Q ss_pred ceeeeccccccEEEEEECCC-CCEEEEeeCCCcEEEEeCCCCeEEEeec--CCcceEEEEEECC------CCCEEEEEeC
Q psy2671 452 SLARMTGHQQLINCVEFSPD-GRIIASASFDKSIKLWDGRIGKFITTLR--GHVQAVYMVAWSS------DSRLLVSGSA 522 (573)
Q Consensus 452 ~~~~~~~h~~~v~~v~~sp~-g~~las~s~dg~i~lwd~~~~~~~~~~~--~h~~~v~~v~~s~------dg~~las~s~ 522 (573)
...++-.....|+++|+ |.++++...++.|++||..+++.+..+. .+...++.++|+| +|+..++.+.
T Consensus 190 ---~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~ 266 (329)
T 3fvz_A 190 ---PRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQE 266 (329)
T ss_dssp ---CCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSC
T ss_pred ---CCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCC
Confidence 00112234688999998 7888888889999999999898888874 4566788999999 3333333344
Q ss_pred CCcEEEEeCCcccccccc---cCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 523 DSTLKVWNMKTKKIEQDL---PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 523 D~~v~vwd~~~~~~~~~l---~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
+..|++|++.+++.+..+ .++.....+++++|+|..+++...++.|++|+
T Consensus 267 ~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 267 PVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp CCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred CcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence 558999999999887776 46777899999999998888888899999985
No 178
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.72 E-value=1e-13 Score=143.09 Aligned_cols=328 Identities=16% Similarity=0.084 Sum_probs=214.7
Q ss_pred CCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeecccc
Q psy2671 120 PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRC 199 (573)
Q Consensus 120 ~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (573)
|.+.++++...+++|.++|..+++.+..+.
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~-------------------------------------------------- 194 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLD-------------------------------------------------- 194 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEE--------------------------------------------------
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEe--------------------------------------------------
Confidence 455677888889999999998876543211
Q ss_pred ccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECC--CCeeeEEecCCCCcEEEEEEc----CCCCeEEEEee-CCe
Q psy2671 200 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT--TQTPLFKCEGHKHWVLCIAWS----PDSKQLVSGCK-NGV 272 (573)
Q Consensus 200 ~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~--~~~~~~~~~~h~~~V~~v~~s----~dg~~l~sgs~-dg~ 272 (573)
....+..+.|||||+++++++.|+.|.+||+. +++.+.++.... ....++|+ |||++++++.. +++
T Consensus 195 ------~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~ 267 (567)
T 1qks_A 195 ------TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQ 267 (567)
T ss_dssp ------CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTE
T ss_pred ------CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCe
Confidence 11245688999999999999999999999995 777776665433 35789999 69999887665 589
Q ss_pred EEEEECCCCceeccccc-C--------Ccc-cEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCcc
Q psy2671 273 IHAWDSSTGKQIGQPMR-G--------HKQ-WITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-TSHTRS 341 (573)
Q Consensus 273 i~vwd~~~~~~~~~~~~-~--------h~~-~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~h~~~ 341 (573)
|.++|..+.+.+..... + |.. .+.++...+. ....++....+|.|.++|....+..... ......
T Consensus 268 v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~----~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~ 343 (567)
T 1qks_A 268 YVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHY----RPEFIVNVKETGKILLVDYTDLNNLKTTEISAERF 343 (567)
T ss_dssp EEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSS----SSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSS
T ss_pred EEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCC----CCEEEEEecCCCeEEEEecCCCccceeeeeecccc
Confidence 99999988766532211 1 212 4555554442 1234566677899999998765322221 122334
Q ss_pred EEEEEECCCc-EEEE-EeCCCeEEEEeCCCCeeeEeccC-CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671 342 VTCIRWGGSG-LIYS-ASQDRTIKVWRASDGVMCRTLEG-HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418 (573)
Q Consensus 342 v~~~~~~~~~-~l~s-~s~d~~i~vw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (573)
...+.|++++ .+++ ...++.|.++|..+++....+.- -..+ ++. .+
T Consensus 344 ~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~P------hpg----------~g--------------- 392 (567)
T 1qks_A 344 LHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP------HPG----------RG--------------- 392 (567)
T ss_dssp EEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB------CCT----------TC---------------
T ss_pred ccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCC------CCc----------cc---------------
Confidence 6678898887 4444 44689999999999876544321 0000 000 00
Q ss_pred hhheeeeCCC-CcEEEEEe-CCCeEEEEcCCCC------ccceeeeccccccEEEEEECCCCCEEEEeeC-------CCc
Q psy2671 419 LAKYQAQCPE-GEKLVSGS-DDFTLFLWNPEKE------KKSLARMTGHQQLINCVEFSPDGRIIASASF-------DKS 483 (573)
Q Consensus 419 ~~~~~~~~~~-~~~l~sg~-~dg~i~lwd~~~~------~~~~~~~~~h~~~v~~v~~sp~g~~las~s~-------dg~ 483 (573)
.....|+ +...++.. .+++|.++|.... .+.+..+......-..+.++|+++++.+... ..+
T Consensus 393 ---~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~ 469 (567)
T 1qks_A 393 ---ANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGS 469 (567)
T ss_dssp ---EEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTC
T ss_pred ---eeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCce
Confidence 0001244 34445554 5689999998752 2234444433222234778999999888653 358
Q ss_pred EEEEeCCCC-----e-EEEeec--------CCcceEEEEEECCCCCEEEEEe-----CCCcEEEEeCCcccccccccC
Q psy2671 484 IKLWDGRIG-----K-FITTLR--------GHVQAVYMVAWSSDSRLLVSGS-----ADSTLKVWNMKTKKIEQDLPG 542 (573)
Q Consensus 484 i~lwd~~~~-----~-~~~~~~--------~h~~~v~~v~~s~dg~~las~s-----~D~~v~vwd~~~~~~~~~l~~ 542 (573)
|.++|..+. . ....+. .-...+..+.|+|+|+.+..+. .++.|.|+|.+++++...++.
T Consensus 470 v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 470 VAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD 547 (567)
T ss_dssp EEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred EEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence 999998876 2 112221 1235788999999999877663 378999999999988777764
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.70 E-value=8.7e-15 Score=142.44 Aligned_cols=274 Identities=11% Similarity=0.076 Sum_probs=178.3
Q ss_pred cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeE
Q psy2671 112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVF 191 (573)
Q Consensus 112 ~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (573)
.|.+++|++++..+++.+.++.++.|.. .+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------------------------------------------- 38 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTITA---EPWL--------------------------------------------- 38 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEEEC---EEEE---------------------------------------------
T ss_pred ccceeeecCCccceeEEeecccCccccc---ceeE---------------------------------------------
Confidence 4677889999888888888899999932 1110
Q ss_pred EEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC-
Q psy2671 192 QVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN- 270 (573)
Q Consensus 192 ~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d- 270 (573)
.+.++...+.+++|+|+|+.++++..++.|.+||..+++.......+...+.+++|+|+|+.+++...+
T Consensus 39 ----------~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~ 108 (333)
T 2dg1_A 39 ----------EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDF 108 (333)
T ss_dssp ----------EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTS
T ss_pred ----------EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCC
Confidence 112345567899999999987888889999999998876554443566779999999999877776666
Q ss_pred ---CeEEEEECCCCceecc-cccCCcccEEEEEecccccCCCCCEEEEEeC------CCcEEEEECCCCeEEEEecCCCc
Q psy2671 271 ---GVIHAWDSSTGKQIGQ-PMRGHKQWITALSWEPFHLNHQCRRFASSGK------DGAIRIWDVILSQCVRVLTSHTR 340 (573)
Q Consensus 271 ---g~i~vwd~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~h~~ 340 (573)
+.|.+||.+++..... ....+...+..+.+.| +++.+++... .+.|..++...++... +..+..
T Consensus 109 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-----~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ 182 (333)
T 2dg1_A 109 KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS-----KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNIS 182 (333)
T ss_dssp SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT-----TSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEES
T ss_pred CCCceEEEEeCCCCEEEEEEccCccCCcccceEECC-----CCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCC
Confidence 6899999887754211 1112345677777765 4566665543 2456566655444332 222233
Q ss_pred cEEEEEECCCc-EEEE-EeCCCeEEEEeCCC-CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671 341 SVTCIRWGGSG-LIYS-ASQDRTIKVWRASD-GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH 417 (573)
Q Consensus 341 ~v~~~~~~~~~-~l~s-~s~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (573)
.+..++|++++ .++. .+.++.|.+|+..+ +.....+..
T Consensus 183 ~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~--------------------------------------- 223 (333)
T 2dg1_A 183 VANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGA--------------------------------------- 223 (333)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEE---------------------------------------
T ss_pred cccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccc---------------------------------------
Confidence 46778888776 3443 34567777777642 211100000
Q ss_pred hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe
Q psy2671 418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497 (573)
Q Consensus 418 ~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~ 497 (573)
.......++ ..+..++++++|+++++...++.|.+||. .++.+..
T Consensus 224 ---------------------------------~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~ 268 (333)
T 2dg1_A 224 ---------------------------------TIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQ 268 (333)
T ss_dssp ---------------------------------EEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEE
T ss_pred ---------------------------------eEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEE
Confidence 000001111 24577999999998888888899999998 4666666
Q ss_pred ecCCcc------eEEEEEECCCCCEEEEEeCC
Q psy2671 498 LRGHVQ------AVYMVAWSSDSRLLVSGSAD 523 (573)
Q Consensus 498 ~~~h~~------~v~~v~~s~dg~~las~s~D 523 (573)
+..+.. .+.+++|+||++.|+.++.+
T Consensus 269 ~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 269 ILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 654432 67899999998777666554
No 180
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.70 E-value=6.6e-13 Score=126.69 Aligned_cols=283 Identities=6% Similarity=-0.004 Sum_probs=188.1
Q ss_pred CCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee-EEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC
Q psy2671 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL-FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281 (573)
Q Consensus 203 ~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~-~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~ 281 (573)
++.+...+.++++.|+|+..++...++.|.+||.. +... .....+...+.+++++++|..+++...++.|..|+.. +
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 34556789999999999977777668899999988 4432 2223345678999999999877776668899999986 3
Q ss_pred ceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE-ecCCCccEEEEEECCCcEEEEEe-CC
Q psy2671 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV-LTSHTRSVTCIRWGGSGLIYSAS-QD 359 (573)
Q Consensus 282 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~l~s~s-~d 359 (573)
+............+.++.+.+ +++.+++...++.|..||. .++.... ...+...+.++++.+++.++.+. .+
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~-----~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 161 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGP-----NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQN 161 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECT-----TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred cEEEEeCCCcCCCceeeEECC-----CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCC
Confidence 322111222344567777654 5567777767889999998 4443332 33345668899998888666655 46
Q ss_pred CeEEEEeCCCCeeeEe-ccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671 360 RTIKVWRASDGVMCRT-LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD 438 (573)
Q Consensus 360 ~~i~vw~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 438 (573)
+.|..|+. ++..... .......+..+++ .+++...++...+
T Consensus 162 ~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~-------------------------------------~~~g~l~v~~~~~ 203 (299)
T 2z2n_A 162 NAIGRITE-SGDITEFKIPTPASGPVGITK-------------------------------------GNDDALWFVEIIG 203 (299)
T ss_dssp TEEEEECT-TCCEEEEECSSTTCCEEEEEE-------------------------------------CTTSSEEEEETTT
T ss_pred CEEEEEcC-CCcEEEeeCCCCCCcceeEEE-------------------------------------CCCCCEEEEccCC
Confidence 88999988 5544321 1111122222222 2556666666678
Q ss_pred CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe-ecCCcceEEEEEECCCCCEE
Q psy2671 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT-LRGHVQAVYMVAWSSDSRLL 517 (573)
Q Consensus 439 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~-~~~h~~~v~~v~~s~dg~~l 517 (573)
+.|..|+. ++.........+...+.+++++++|+++++...++.|..||. .++.... +..+...+.++++ ++|++.
T Consensus 204 ~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~ 280 (299)
T 2z2n_A 204 NKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIW 280 (299)
T ss_dssp TEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEE
T ss_pred ceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEE
Confidence 89999998 443222223334466899999999997777667889999998 4543322 3445567889999 888877
Q ss_pred EEEeCCCcEEEEeCCccc
Q psy2671 518 VSGSADSTLKVWNMKTKK 535 (573)
Q Consensus 518 as~s~D~~v~vwd~~~~~ 535 (573)
++.+ .+.+..++.++++
T Consensus 281 v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 281 FAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp EEET-TTEEEEEEEC---
T ss_pred EEec-CCcEEEEEcCccc
Confidence 7665 5667777776543
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.70 E-value=3.4e-15 Score=145.33 Aligned_cols=273 Identities=14% Similarity=0.131 Sum_probs=179.3
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~ 287 (573)
..|.+++|+|++..++..+.++.++.| .+.....+..+...+.+++|+|+|+.++++..++.|.+||..+++... .
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~-~ 81 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR-P 81 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-E
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE-E
Confidence 346778899998888777889999999 345566666777788999999999977788889999999998876432 1
Q ss_pred ccCCcccEEEEEecccccCCCCCEEEEEeCC----CcEEEEECCCCeEEEEec--CCCccEEEEEECCCcEEEEEeCCCe
Q psy2671 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKD----GAIRIWDVILSQCVRVLT--SHTRSVTCIRWGGSGLIYSASQDRT 361 (573)
Q Consensus 288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~l~s~s~d~~ 361 (573)
...+...+.++++.| +++.+++...+ +.|.+||...+.....+. .+...+.++++.+++.++.++..+.
T Consensus 82 ~~~~~~~~~~i~~~~-----dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 156 (333)
T 2dg1_A 82 FVSHKANPAAIKIHK-----DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGY 156 (333)
T ss_dssp EECSSSSEEEEEECT-----TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCB
T ss_pred eeCCCCCcceEEECC-----CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecccc
Confidence 223456788888765 56677766665 689999987765543332 2334577777777665554443210
Q ss_pred EEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeE
Q psy2671 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTL 441 (573)
Q Consensus 362 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i 441 (573)
.. ...+.|
T Consensus 157 ------~~------------------------------------------------------------------~~~~~l 164 (333)
T 2dg1_A 157 ------ST------------------------------------------------------------------NPLGGV 164 (333)
T ss_dssp ------TT------------------------------------------------------------------BCCEEE
T ss_pred ------cc------------------------------------------------------------------CCCceE
Confidence 00 001122
Q ss_pred EEEcCCCCccceeeeccccccEEEEEECCCCCEEE-EeeCCCcEEEEeCCC-CeEEE--------eecCCcceEEEEEEC
Q psy2671 442 FLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIA-SASFDKSIKLWDGRI-GKFIT--------TLRGHVQAVYMVAWS 511 (573)
Q Consensus 442 ~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~la-s~s~dg~i~lwd~~~-~~~~~--------~~~~h~~~v~~v~~s 511 (573)
..++..... ...+..+...+..++|+|+|+.|+ +.+.++.|.+||..+ +..+. .+.++ ..+..++++
T Consensus 165 ~~~~~~~~~--~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d 241 (333)
T 2dg1_A 165 YYVSPDFRT--VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCID 241 (333)
T ss_dssp EEECTTSCC--EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEB
T ss_pred EEEeCCCCE--EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEEC
Confidence 223322111 111111123467899999998554 455678999999863 33221 12233 467789999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCcccccccccCcC------CCEEEEEEccCCCEEEEeeCC
Q psy2671 512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG------DEVYAVDWAPDGEKVASGGKD 565 (573)
Q Consensus 512 ~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~------~~v~~~~~s~d~~~l~s~~~d 565 (573)
++|++.++...++.|.+||.. ++....+..+. ..+.+++|+||++.|..++.+
T Consensus 242 ~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 242 SDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp TTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 999988888788999999984 44444443332 268899999998777655554
No 182
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.68 E-value=1.3e-12 Score=124.55 Aligned_cols=275 Identities=11% Similarity=0.042 Sum_probs=182.7
Q ss_pred CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEEC
Q psy2671 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326 (573)
Q Consensus 247 ~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 326 (573)
.+...+.+++++++|+.+++...++.|.+||.. +.........+...+.++.+.+ +++.+++...++.|..|+.
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~-----~g~l~v~~~~~~~i~~~~~ 85 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISS-----DGEVWFTENAANKIGRITK 85 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECT-----TSCEEEEETTTTEEEEECT
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECC-----CCCEEEeCCCCCeEEEECC
Confidence 344568999999999877766668899999988 5543222223345677777654 5667777666888999997
Q ss_pred CCCeEE-EEecCCCccEEEEEECCCcEEEEEe-CCCeEEEEeCCCCeeeEe-ccCCcceeeEEEeccCceeEEEEcCCCc
Q psy2671 327 ILSQCV-RVLTSHTRSVTCIRWGGSGLIYSAS-QDRTIKVWRASDGVMCRT-LEGHAHWVNTLALSTDYLMRVEATSTGG 403 (573)
Q Consensus 327 ~~~~~~-~~~~~h~~~v~~~~~~~~~~l~s~s-~d~~i~vw~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~~~~~~~~~~ 403 (573)
. ++.. ..+......+.++++.+++.++.+. .++.|..|+. ++..... ...+...+..+++
T Consensus 86 ~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~--------------- 148 (299)
T 2z2n_A 86 K-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITL--------------- 148 (299)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE---------------
T ss_pred C-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEE---------------
Confidence 6 3322 2222345578899998888666654 5788999987 4433221 1111122222222
Q ss_pred eeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCc
Q psy2671 404 FKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483 (573)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~ 483 (573)
.+++...++...++.|..||. ++.........+...+.+++++++|+++++...++.
T Consensus 149 ----------------------~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 205 (299)
T 2z2n_A 149 ----------------------GSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNK 205 (299)
T ss_dssp ----------------------CTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred ----------------------cCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCce
Confidence 255666776667789999998 433222222333456889999999998887777889
Q ss_pred EEEEeCCCCeEEE-eecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc-ccccCcCCCEEEEEEccCCCEEEE
Q psy2671 484 IKLWDGRIGKFIT-TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE-QDLPGHGDEVYAVDWAPDGEKVAS 561 (573)
Q Consensus 484 i~lwd~~~~~~~~-~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~-~~l~~h~~~v~~~~~s~d~~~l~s 561 (573)
|..||. +++... .+..+...+..++++++|++.++...++.|..||.. ++.. ..+..+...+.++.+ ++++..++
T Consensus 206 i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~ 282 (299)
T 2z2n_A 206 IGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICF-DGETIWFA 282 (299)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEE-CSSCEEEE
T ss_pred EEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-CceEEEeCCCCCCccceEEe-cCCCEEEE
Confidence 999998 665433 234455678899999999977776678899999984 4332 224455667999999 88887776
Q ss_pred eeCCCcEEE
Q psy2671 562 GGKDKVLRL 570 (573)
Q Consensus 562 ~~~d~~i~i 570 (573)
.+.++.+++
T Consensus 283 ~~~~~l~~~ 291 (299)
T 2z2n_A 283 MECDKIGKL 291 (299)
T ss_dssp ETTTEEEEE
T ss_pred ecCCcEEEE
Confidence 655554443
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.67 E-value=4.2e-14 Score=138.36 Aligned_cols=252 Identities=10% Similarity=0.117 Sum_probs=164.7
Q ss_pred cEEEEEEcCCCCeEEEEe---------eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC---
Q psy2671 251 WVLCIAWSPDSKQLVSGC---------KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD--- 318 (573)
Q Consensus 251 ~V~~v~~s~dg~~l~sgs---------~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d--- 318 (573)
.+...++ ||++++... .++.|.+||+.+++.. .+ ..+..+.|+| ++++++..+.+
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~--~l----~~~~~~~~Sp-----Dg~~la~~~~~~~~ 82 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR--FI----ENATMPRISP-----DGKKIAFMRANEEK 82 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE--EE----ESCEEEEECT-----TSSEEEEEEEETTT
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE--Ec----ccCCCeEECC-----CCCEEEEEEeccCC
Confidence 4666777 888877542 3568999999887642 12 3466677765 67888877654
Q ss_pred C--cEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeC---------------------------CCeEEEEeCC
Q psy2671 319 G--AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQ---------------------------DRTIKVWRAS 368 (573)
Q Consensus 319 g--~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~---------------------------d~~i~vw~~~ 368 (573)
+ .|.+|++..++.......+ . +..+.|++++ .|+.++. ...|.+|++.
T Consensus 83 ~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~ 160 (347)
T 2gop_A 83 KVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE 160 (347)
T ss_dssp TEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT
T ss_pred CcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC
Confidence 3 3778888877765554443 3 8999999887 4555543 2467788887
Q ss_pred CCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC---------C
Q psy2671 369 DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD---------F 439 (573)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d---------g 439 (573)
++.....+.. . .+..++++ |+| +++++..+ .
T Consensus 161 ~~~~~~~l~~-~-~~~~~~~s-------------------------------------pdg-~~~~~~~~~~~~~~~~~~ 200 (347)
T 2gop_A 161 SEEVIEEFEK-P-RFSSGIWH-------------------------------------RDK-IVVNVPHREIIPQYFKFW 200 (347)
T ss_dssp TTEEEEEEEE-E-TTCEEEEE-------------------------------------TTE-EEEEEECCCSSCCSSCCE
T ss_pred CCeEEeeecC-C-CcccccCC-------------------------------------CCe-EEEEEecccccccccccc
Confidence 7765333322 1 34444444 445 44444433 1
Q ss_pred eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC--------CcEEEEeCCCCeEEEeecCCcceEEE-EEE
Q psy2671 440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD--------KSIKLWDGRIGKFITTLRGHVQAVYM-VAW 510 (573)
Q Consensus 440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d--------g~i~lwd~~~~~~~~~~~~h~~~v~~-v~~ 510 (573)
.|.++| ++ . ...+..+ ..+..+ +|||+.|+.++.+ ..|.+|| +++......+|...+.. +.|
T Consensus 201 ~l~~~d--~~-~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~ 271 (347)
T 2gop_A 201 DIYIWE--DG-K-EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIK 271 (347)
T ss_dssp EEEEEE--TT-E-EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEE
T ss_pred cEEEeC--CC-c-eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEE
Confidence 344445 22 2 2333333 445444 9999998877754 3688888 66655555666777886 899
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcE-EEcc
Q psy2671 511 SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL-RLWQ 572 (573)
Q Consensus 511 s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i-~iw~ 572 (573)
+ |+ ++++++.++.++|| +.+++... +..+...|.+++|+| +.+++++.++.. .+|.
T Consensus 272 s-dg-~~~~~~~~~~~~l~-~~~g~~~~-~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~ 328 (347)
T 2gop_A 272 D-GK-VYFTLFEEGSVNLY-IWDGEIKP-IAKGRHWIMGFDVDE--IVVYLKETATRLRELFT 328 (347)
T ss_dssp T-TE-EEEEEEETTEEEEE-EESSSEEE-EECSSSEEEEEEESS--SEEEEEECSSSCCEEEE
T ss_pred c-Cc-EEEEEecCCcEEEE-EcCCceEE-EecCCCeEEeeeeeC--cEEEEEcCCCChHHheE
Confidence 9 98 99999999999999 87555433 334567899999999 677777777654 6663
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.67 E-value=5.2e-13 Score=137.89 Aligned_cols=314 Identities=12% Similarity=0.044 Sum_probs=204.0
Q ss_pred CCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC--CCceecccccCCccc
Q psy2671 217 PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS--TGKQIGQPMRGHKQW 294 (573)
Q Consensus 217 p~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~--~~~~~~~~~~~h~~~ 294 (573)
|.+..+++...+++|.++|..+++.+.++.... .+..++|+|||+++++++.|+.|.+||+. +++.+.....+. .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~--~ 241 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS--E 241 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS--E
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC--C
Confidence 455667788889999999999998887765432 46789999999999999999999999995 665543322222 2
Q ss_pred EEEEEecccccCCCCCEEEEE-eCCCcEEEEECCCCeEEEEecCC-----------CccEEEEEECCCc--EEEEEeCCC
Q psy2671 295 ITALSWEPFHLNHQCRRFASS-GKDGAIRIWDVILSQCVRVLTSH-----------TRSVTCIRWGGSG--LIYSASQDR 360 (573)
Q Consensus 295 v~~~~~~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~h-----------~~~v~~~~~~~~~--~l~s~s~d~ 360 (573)
...+.++++.. +++++++++ ..++++.++|..+.+.++.+... ...+..+..++++ .++....+|
T Consensus 242 P~~ia~s~~~~-pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 242 ARSIETSKMEG-WEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp EEEEEECCSTT-CTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CceeEEccccC-CCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 35666652110 266666554 55699999999998887765422 1256677766553 455666778
Q ss_pred eEEEEeCCCCeeeEecc-CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe-CC
Q psy2671 361 TIKVWRASDGVMCRTLE-GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS-DD 438 (573)
Q Consensus 361 ~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-~d 438 (573)
.|.++|..+........ ........ ..+.|++++++++. .+
T Consensus 321 ~v~~vd~~~~~~~~v~~i~~~~~~~d-------------------------------------~~~~pdgr~~~va~~~s 363 (567)
T 1qks_A 321 KILLVDYTDLNNLKTTEISAERFLHD-------------------------------------GGLDGSHRYFITAANAR 363 (567)
T ss_dssp EEEEEETTCSSEEEEEEEECCSSEEE-------------------------------------EEECTTSCEEEEEEGGG
T ss_pred eEEEEecCCCccceeeeeeccccccC-------------------------------------ceECCCCCEEEEEeCCC
Confidence 88888876542211000 00001111 12346788776554 67
Q ss_pred CeEEEEcCCCCccceeeec----cccccEEEEEECCCC-CEEEEee-CCCcEEEEeCCC-------CeEEEeecCCcceE
Q psy2671 439 FTLFLWNPEKEKKSLARMT----GHQQLINCVEFSPDG-RIIASAS-FDKSIKLWDGRI-------GKFITTLRGHVQAV 505 (573)
Q Consensus 439 g~i~lwd~~~~~~~~~~~~----~h~~~v~~v~~sp~g-~~las~s-~dg~i~lwd~~~-------~~~~~~~~~h~~~v 505 (573)
++|.++|+.+.+....... .|......+ ++|++ .+.+++. .+++|.++|..+ .+.++++......-
T Consensus 364 n~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~ 442 (567)
T 1qks_A 364 NKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGS 442 (567)
T ss_dssp TEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCC
T ss_pred CeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCC
Confidence 8999999987653222112 243222122 58874 4455553 468999999887 66777777553343
Q ss_pred EEEEECCCCCEEEEEeC-------CCcEEEEeCCcc-----ccc-ccc--------cCcCCCEEEEEEccCCCEEEEee-
Q psy2671 506 YMVAWSSDSRLLVSGSA-------DSTLKVWNMKTK-----KIE-QDL--------PGHGDEVYAVDWAPDGEKVASGG- 563 (573)
Q Consensus 506 ~~v~~s~dg~~las~s~-------D~~v~vwd~~~~-----~~~-~~l--------~~h~~~v~~~~~s~d~~~l~s~~- 563 (573)
..+..+|++++|.+... .++|.++|+.+. ... ..+ ..-...+..+.|+|+|+++..+.
T Consensus 443 ~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~ 522 (567)
T 1qks_A 443 LFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVW 522 (567)
T ss_dssp CCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEE
T ss_pred EEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEee
Confidence 45778999999988663 358999999876 211 222 12245789999999999876552
Q ss_pred ----CCCcEEEcc
Q psy2671 564 ----KDKVLRLWQ 572 (573)
Q Consensus 564 ----~d~~i~iw~ 572 (573)
.++.|.+++
T Consensus 523 ~~~~~~~~i~v~D 535 (567)
T 1qks_A 523 NGKDQESALVVVD 535 (567)
T ss_dssp CCTTSCCEEEEEE
T ss_pred cCCCCCCcEEEEE
Confidence 267777765
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.66 E-value=3.9e-14 Score=152.55 Aligned_cols=246 Identities=13% Similarity=0.133 Sum_probs=162.2
Q ss_pred CCCCcEEEEEEcCCCCeEEEEeCCC-----eEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCe-------
Q psy2671 205 GHAEAVISVKFSPNGRSLASGSGDT-----TVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV------- 272 (573)
Q Consensus 205 gh~~~V~~~~fsp~g~~las~s~d~-----~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~------- 272 (573)
+|...+.+++|||||++||.++.++ +|++||+.+++.+.....+. .+.+++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEeCCCEEEEEEECCcccccccc
Confidence 4656788999999999998776543 89999999988664322221 2567999999999999888766
Q ss_pred ---------EEEEECCCCcee---cccccCCcccEEEEEecccccCCCCCEEEEEeC-----CCcEEEEECCC------C
Q psy2671 273 ---------IHAWDSSTGKQI---GQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-----DGAIRIWDVIL------S 329 (573)
Q Consensus 273 ---------i~vwd~~~~~~~---~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~-----dg~v~iwd~~~------~ 329 (573)
|++|++.++... ......|...+..+.|+| ++++++..+. +..|++||+.. +
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-----Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 275 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD-----DGRYVLLSIREGCDPVNRLWYCDLQQESNGITG 275 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-----TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCS
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC-----CCCEEEEEEEccCCCccEEEEEECcccccccCC
Confidence 999999877521 111223455677777765 6777776654 56788898865 3
Q ss_pred e-EEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCC
Q psy2671 330 Q-CVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408 (573)
Q Consensus 330 ~-~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~ 408 (573)
. ....+..+...+... |++
T Consensus 276 ~~~~~~l~~~~~~~~~~-~s~----------------------------------------------------------- 295 (710)
T 2xdw_A 276 ILKWVKLIDNFEGEYDY-VTN----------------------------------------------------------- 295 (710)
T ss_dssp SCCCEEEECSSSSCEEE-EEE-----------------------------------------------------------
T ss_pred ccceEEeeCCCCcEEEE-Eec-----------------------------------------------------------
Confidence 2 233333333322221 211
Q ss_pred CCchhhhhhhhhheeeeCCCCcEEEEEeC----CCeEEEEcCCCCcc-ceeeeccccc--cEEEEEECCCCCEEEEeeCC
Q psy2671 409 ANPEESSKHALAKYQAQCPEGEKLVSGSD----DFTLFLWNPEKEKK-SLARMTGHQQ--LINCVEFSPDGRIIASASFD 481 (573)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~----dg~i~lwd~~~~~~-~~~~~~~h~~--~v~~v~~sp~g~~las~s~d 481 (573)
+|..|+..+. .+.|.+||+.+... ....+..|.. .+..++|++++.++++...|
T Consensus 296 -------------------dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~ 356 (710)
T 2xdw_A 296 -------------------EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD 356 (710)
T ss_dssp -------------------ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred -------------------cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence 1222222221 23466666554321 1233334433 57788999888889999888
Q ss_pred Cc--EEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEE-e---CCCcEEEEeCCccc
Q psy2671 482 KS--IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSG-S---ADSTLKVWNMKTKK 535 (573)
Q Consensus 482 g~--i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~-s---~D~~v~vwd~~~~~ 535 (573)
+. |.+||..+++.+..+..+...+..++++|+++.++.. + ..++|++||+.+++
T Consensus 357 g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 357 VKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 85 5667877788778888787788999999999766533 2 34689999998776
No 186
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.65 E-value=1.3e-14 Score=155.84 Aligned_cols=208 Identities=14% Similarity=0.086 Sum_probs=142.0
Q ss_pred CCccccEEEEEEcCCCCeeE-----EeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671 107 PGHAEAVISVKFSPNGRSLA-----SGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV 181 (573)
Q Consensus 107 ~gH~~~V~~l~~s~~~~~la-----t~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (573)
.+|...+.+++|||||++|| +|+.+.+|++||+.+++.+..
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~---------------------------------- 162 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV---------------------------------- 162 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS----------------------------------
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC----------------------------------
Confidence 46777899999999999999 666678999999998754200
Q ss_pred EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCe-------------EEEEECCCCe----eeEE
Q psy2671 182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTT-------------VRFWDVTTQT----PLFK 244 (573)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~-------------i~iwd~~~~~----~~~~ 244 (573)
..+.+.. ...++|+|||+.|+.++.|.. |++|++.++. .++.
T Consensus 163 -------------------~~~~~~~--~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~ 221 (695)
T 2bkl_A 163 -------------------DVIEGGK--YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHE 221 (695)
T ss_dssp -------------------CCBSCCT--TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEEC
T ss_pred -------------------cccCccc--ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEe
Confidence 0001111 146789999999999998876 9999998765 4444
Q ss_pred ecCCCCcEEEEEEcCCCCeEEEEeeCC----eEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEe---C
Q psy2671 245 CEGHKHWVLCIAWSPDSKQLVSGCKNG----VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG---K 317 (573)
Q Consensus 245 ~~~h~~~V~~v~~s~dg~~l~sgs~dg----~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~---~ 317 (573)
...|...+.+++|||||++|+.++.++ .|.+|+..++.. ..+..+...+....| + +++.++.+. .
T Consensus 222 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~--~~l~~~~~~~~~~~~-~-----~g~l~~~s~~~~~ 293 (695)
T 2bkl_A 222 RTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF--RLLVKGVGAKYEVHA-W-----KDRFYVLTDEGAP 293 (695)
T ss_dssp CCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC--EEEEECSSCCEEEEE-E-----TTEEEEEECTTCT
T ss_pred cCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce--EEeecCCCceEEEEe-c-----CCcEEEEECCCCC
Confidence 455667899999999999998888776 677776655432 222333333333333 1 344444443 2
Q ss_pred CCcEEEEECCCCeE---EEEecCC-CccEEEEEECCCcEEEEEeCCCeEEEEeCC-CCeeeEecc
Q psy2671 318 DGAIRIWDVILSQC---VRVLTSH-TRSVTCIRWGGSGLIYSASQDRTIKVWRAS-DGVMCRTLE 377 (573)
Q Consensus 318 dg~v~iwd~~~~~~---~~~~~~h-~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~-~~~~~~~~~ 377 (573)
++.|.+||+.++.. ...+..+ ...+..+.+.++..+++...|+..++|... ++.....+.
T Consensus 294 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~ 358 (695)
T 2bkl_A 294 RQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQ 358 (695)
T ss_dssp TCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEECC
T ss_pred CCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEec
Confidence 57899999877642 3334433 456788888866688889999999888654 344444443
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.63 E-value=5.5e-14 Score=151.45 Aligned_cols=286 Identities=9% Similarity=0.050 Sum_probs=166.6
Q ss_pred CCCCeEEEEeCCC-----eEEEEECCCCeeeEEe------cCCCCcEEEEEEcCCCCeEEEEeeCC-----eEEEEECCC
Q psy2671 217 PNGRSLASGSGDT-----TVRFWDVTTQTPLFKC------EGHKHWVLCIAWSPDSKQLVSGCKNG-----VIHAWDSST 280 (573)
Q Consensus 217 p~g~~las~s~d~-----~i~iwd~~~~~~~~~~------~~h~~~V~~v~~s~dg~~l~sgs~dg-----~i~vwd~~~ 280 (573)
|+|++++....++ .+.+.+..++.....+ .+|...+.+++|||||++||.++.++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 8888876554321 3333343333322111 24545688999999999998776543 899999999
Q ss_pred CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCC
Q psy2671 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR 360 (573)
Q Consensus 281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~ 360 (573)
++........ ..+..++|.| +++.|+.++.++. ... ..+. .-......
T Consensus 161 g~~~~~~~~~--~~~~~~~wsp-----Dg~~l~~~~~~~~-------~~~----~~~~--------------~~~~~~~~ 208 (710)
T 2xdw_A 161 AKELPDVLER--VKFSCMAWTH-----DGKGMFYNAYPQQ-------DGK----SDGT--------------ETSTNLHQ 208 (710)
T ss_dssp TEEEEEEEEE--ECSCCEEECT-----TSSEEEEEECCCC-------SSC----CSSS--------------CCCCCCCC
T ss_pred CCCCcccccC--cccceEEEEe-----CCCEEEEEEECCc-------ccc----cccc--------------ccccCCCC
Confidence 8765322211 1244566765 6778888776654 000 0000 00001123
Q ss_pred eEEEEeCCCCee----eEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671 361 TIKVWRASDGVM----CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS 436 (573)
Q Consensus 361 ~i~vw~~~~~~~----~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~ 436 (573)
.|.+|++.++.. +.....|..++..+.+ +|+|++|+..+
T Consensus 209 ~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~-------------------------------------SpDg~~l~~~~ 251 (710)
T 2xdw_A 209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL-------------------------------------SDDGRYVLLSI 251 (710)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEE-------------------------------------CTTSCEEEEEE
T ss_pred EEEEEECCCCcccceEEeccCCCCeEEEEEEE-------------------------------------cCCCCEEEEEE
Confidence 344455443321 1111112222222222 24455555444
Q ss_pred C-----CCeEEEEcCCC------CccceeeeccccccEEEEEECCCCCEEEEeeCC----CcEEEEeCCCCe--EEEeec
Q psy2671 437 D-----DFTLFLWNPEK------EKKSLARMTGHQQLINCVEFSPDGRIIASASFD----KSIKLWDGRIGK--FITTLR 499 (573)
Q Consensus 437 ~-----dg~i~lwd~~~------~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d----g~i~lwd~~~~~--~~~~~~ 499 (573)
. +..+++||+.+ +......+..+...+.. .|+|+|+.|+..+.. +.|.+||+.++. ....+.
T Consensus 252 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp ECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred EccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 3 45677777654 32234445555555544 488999887766543 369999988764 234444
Q ss_pred CCcc--eEEEEEECCCCCEEEEEeCCCc--EEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEe-e---CCCcEEEc
Q psy2671 500 GHVQ--AVYMVAWSSDSRLLVSGSADST--LKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASG-G---KDKVLRLW 571 (573)
Q Consensus 500 ~h~~--~v~~v~~s~dg~~las~s~D~~--v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~-~---~d~~i~iw 571 (573)
.|.. .+..++|++++.++++...|+. |++|++.+++....+..+.+.+..+.++|+++.|+.. + ..++|++|
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~ 410 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHC 410 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEE
T ss_pred CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEE
Confidence 4433 6888999988888888888885 5666776777667777777789999999999876633 2 33677777
Q ss_pred c
Q psy2671 572 Q 572 (573)
Q Consensus 572 ~ 572 (573)
+
T Consensus 411 d 411 (710)
T 2xdw_A 411 D 411 (710)
T ss_dssp E
T ss_pred E
Confidence 5
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.63 E-value=3.2e-14 Score=152.81 Aligned_cols=274 Identities=14% Similarity=0.049 Sum_probs=172.3
Q ss_pred cCCCCeEEEEeCCC---eEEEEE--CCCCeeeEEe------cCCCCcEEEEEEcCCCCeEE-----EEeeCCeEEEEECC
Q psy2671 216 SPNGRSLASGSGDT---TVRFWD--VTTQTPLFKC------EGHKHWVLCIAWSPDSKQLV-----SGCKNGVIHAWDSS 279 (573)
Q Consensus 216 sp~g~~las~s~d~---~i~iwd--~~~~~~~~~~------~~h~~~V~~v~~s~dg~~l~-----sgs~dg~i~vwd~~ 279 (573)
+|+|++++....++ .-.||. ...+.....+ .+|...+.+++|||||++|| .|+.+..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 47888887766543 344554 3344322222 25666789999999999998 34445689999999
Q ss_pred CCcee-cccccCCcccEEEEEecccccCCCCCEEEEEeCCCc-------------EEEEECCCCe----EEEEecCCCcc
Q psy2671 280 TGKQI-GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA-------------IRIWDVILSQ----CVRVLTSHTRS 341 (573)
Q Consensus 280 ~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~-------------v~iwd~~~~~----~~~~~~~h~~~ 341 (573)
+|+.+ ...+.... ...++|.| +++.|+.++.|.. |++|++.++. .+.....|...
T Consensus 156 tg~~~~~~~~~~~~--~~~~~wsp-----Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~ 228 (695)
T 2bkl_A 156 SGEWSKVDVIEGGK--YATPKWTP-----DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTT 228 (695)
T ss_dssp TCCBCSSCCBSCCT--TCCCEECT-----TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTC
T ss_pred CCCCcCCcccCccc--ccceEEec-----CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEE
Confidence 98754 21122111 14566665 7788998888776 9999998765 23333345567
Q ss_pred EEEEEECCCc-EEEEEeCCC----eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhh
Q psy2671 342 VTCIRWGGSG-LIYSASQDR----TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK 416 (573)
Q Consensus 342 v~~~~~~~~~-~l~s~s~d~----~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (573)
+..+.|+++| .|+.++.++ .|.+|+..++... .+..+...+....
T Consensus 229 ~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~~~----------------------------- 278 (695)
T 2bkl_A 229 FLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLVKGVGAKYEVH----------------------------- 278 (695)
T ss_dssp EEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEEECSSCCEEEE-----------------------------
T ss_pred EEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-EeecCCCceEEEE-----------------------------
Confidence 8899999988 455555444 5666655444322 2222211111111
Q ss_pred hhhhheeeeCCCCcEEEEEe---CCCeEEEEcCCCCcc-ceeeeccc--cccEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy2671 417 HALAKYQAQCPEGEKLVSGS---DDFTLFLWNPEKEKK-SLARMTGH--QQLINCVEFSPDGRIIASASFDKSIKLWDGR 490 (573)
Q Consensus 417 ~~~~~~~~~~~~~~~l~sg~---~dg~i~lwd~~~~~~-~~~~~~~h--~~~v~~v~~sp~g~~las~s~dg~i~lwd~~ 490 (573)
.++|..++... .++.|.+||+.+... ....+..+ ...+..++++ ++.++++...|+..+||...
T Consensus 279 ---------~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 279 ---------AWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp ---------EETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred ---------ecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 12344333333 257899999876532 12333333 3457888888 77889999999998888544
Q ss_pred -CCeEEEeecCC-cceEEEEEECCCCCEEEE----EeCCCcEEEEeCCcccc
Q psy2671 491 -IGKFITTLRGH-VQAVYMVAWSSDSRLLVS----GSADSTLKVWNMKTKKI 536 (573)
Q Consensus 491 -~~~~~~~~~~h-~~~v~~v~~s~dg~~las----~s~D~~v~vwd~~~~~~ 536 (573)
.++....+..+ ...+..++++||++.++. ....++|++||+.+++.
T Consensus 349 ~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 349 LKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp TTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 35556666655 567888899999987762 23457899999987653
No 189
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.60 E-value=2.3e-11 Score=115.91 Aligned_cols=278 Identities=9% Similarity=0.002 Sum_probs=182.9
Q ss_pred CCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee-EEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCc
Q psy2671 204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL-FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282 (573)
Q Consensus 204 ~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~-~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~ 282 (573)
+.....+.++++.++|+..++...++.|.+||.. ++.. .....+...+.++++.++|...++...++.|..||.. ++
T Consensus 16 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 16 SIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence 3445678999999999987877778999999987 4432 2233344678999999999877766668899999987 55
Q ss_pred eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE-ecCCCccEEEEEECCCcEEEEEeC-CC
Q psy2671 283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV-LTSHTRSVTCIRWGGSGLIYSASQ-DR 360 (573)
Q Consensus 283 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~l~s~s~-d~ 360 (573)
............+.++.+.+ +++.+++...++.|..+|.. ++.... +......+.++++.+++.++.+.. ++
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~-----~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 167 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGL-----NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNN 167 (300)
T ss_dssp EEEEECSSTTCCEEEEEECS-----TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTT
T ss_pred eEEecCCCCCCCCccceECC-----CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCC
Confidence 43222222335567777653 56677776667889999987 544322 333456788899988776666554 67
Q ss_pred eEEEEeCCCCeeeEe-ccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671 361 TIKVWRASDGVMCRT-LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF 439 (573)
Q Consensus 361 ~i~vw~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 439 (573)
.|..++. ++..... ...+...+..+++ .+++...++....+
T Consensus 168 ~i~~~~~-~g~~~~~~~~~~~~~~~~i~~-------------------------------------d~~g~l~v~~~~~~ 209 (300)
T 2qc5_A 168 SIGRITN-TGKLEEYPLPTNAAAPVGITS-------------------------------------GNDGALWFVEIMGN 209 (300)
T ss_dssp EEEEECT-TCCEEEEECSSTTCCEEEEEE-------------------------------------CTTSSEEEEETTTT
T ss_pred eEEEECC-CCcEEEeeCCCCCCCcceEEE-------------------------------------CCCCCEEEEccCCC
Confidence 8988887 4433221 1111112222222 24566666666677
Q ss_pred eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEE-EeecCCcceEEEEEECCCCCEEE
Q psy2671 440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI-TTLRGHVQAVYMVAWSSDSRLLV 518 (573)
Q Consensus 440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~-~~~~~h~~~v~~v~~s~dg~~la 518 (573)
.|..|+.. +.........+...+.+++++++|++.++...++.|..||. +++.. ..+......+.++++.++|++.+
T Consensus 210 ~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v 287 (300)
T 2qc5_A 210 KIGRITTT-GEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWF 287 (300)
T ss_dssp EEEEECTT-CCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEE
T ss_pred EEEEEcCC-CcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEE
Confidence 89999973 22222222334456889999999998777767789999998 45433 22333345678899999998766
Q ss_pred EEeCCCcEEEEeC
Q psy2671 519 SGSADSTLKVWNM 531 (573)
Q Consensus 519 s~s~D~~v~vwd~ 531 (573)
+.. . .|..+|.
T Consensus 288 ~~~-~-~i~~~~p 298 (300)
T 2qc5_A 288 ALK-C-KIGKLNL 298 (300)
T ss_dssp ECS-S-EEEEEEE
T ss_pred Ecc-C-ceEEeCC
Confidence 554 4 6666665
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.59 E-value=1.7e-12 Score=125.68 Aligned_cols=264 Identities=10% Similarity=0.013 Sum_probs=173.8
Q ss_pred CCCeEEEEECCCCeeeEEec------CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEe
Q psy2671 227 GDTTVRFWDVTTQTPLFKCE------GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSW 300 (573)
Q Consensus 227 ~d~~i~iwd~~~~~~~~~~~------~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~ 300 (573)
.+++|.++|..+++....+. ........+++. +++..++...++.|.+||..+++.+... . .......+++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i-~-~~~~p~~i~~ 91 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRI-T-GFTSPRYIHF 91 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEE-E-CCSSEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEc-C-CCCCCcEEEE
Confidence 38899999999887654321 122346778774 3444555566799999999998875443 2 2244566666
Q ss_pred cccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC-----ccEEEEEECCCcEEEEEe--CCCeEEEEeCCCCeee
Q psy2671 301 EPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT-----RSVTCIRWGGSGLIYSAS--QDRTIKVWRASDGVMC 373 (573)
Q Consensus 301 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~-----~~v~~~~~~~~~~l~s~s--~d~~i~vw~~~~~~~~ 373 (573)
.+ +++.+++...++.|.+||..+++....+.... .....+++ .++.++.+. .+++|.++|..++...
T Consensus 92 ~~-----~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 92 LS-----DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVV 165 (328)
T ss_dssp EE-----TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEE
T ss_pred eC-----CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEE
Confidence 44 44555555589999999999988776655322 13445666 455666666 4899999999988766
Q ss_pred EeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC----------CeEEE
Q psy2671 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD----------FTLFL 443 (573)
Q Consensus 374 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d----------g~i~l 443 (573)
..+..... ...+ ...|+|++++++..+ +.|.+
T Consensus 166 ~~i~~g~~-p~~i-------------------------------------~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~ 207 (328)
T 3dsm_A 166 DELTIGIQ-PTSL-------------------------------------VMDKYNKMWTITDGGYEGSPYGYEAPSLYR 207 (328)
T ss_dssp EEEECSSC-BCCC-------------------------------------EECTTSEEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred EEEEcCCC-ccce-------------------------------------EEcCCCCEEEEECCCccCCccccCCceEEE
Confidence 55432110 0111 123566666666554 78999
Q ss_pred EcCCCCccceeeec-cccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe--ecCCcceEEEEEECC-CCCEEEE
Q psy2671 444 WNPEKEKKSLARMT-GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT--LRGHVQAVYMVAWSS-DSRLLVS 519 (573)
Q Consensus 444 wd~~~~~~~~~~~~-~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~--~~~h~~~v~~v~~s~-dg~~las 519 (573)
+|..+.+. ...+. ........++|+|+++.|.++.. .|.+||..+++.... +..+......++++| ++.+.++
T Consensus 208 id~~t~~v-~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva 284 (328)
T 3dsm_A 208 IDAETFTV-EKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVA 284 (328)
T ss_dssp EETTTTEE-EEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEE
T ss_pred EECCCCeE-EEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEE
Confidence 99876543 22222 11235789999999998887754 899999988775321 222235678999999 4555555
Q ss_pred E----eCCCcEEEEeCCccccccccc
Q psy2671 520 G----SADSTLKVWNMKTKKIEQDLP 541 (573)
Q Consensus 520 ~----s~D~~v~vwd~~~~~~~~~l~ 541 (573)
. ..++.|.+||.. ++.+..+.
T Consensus 285 ~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 285 DAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp ECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred cccccccCCEEEEECCC-CCEEEEEE
Confidence 5 568899999998 77666554
No 191
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.58 E-value=1.7e-12 Score=125.61 Aligned_cols=255 Identities=10% Similarity=0.015 Sum_probs=172.9
Q ss_pred eCCeEEEEECCCCceeccccc-----CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEE
Q psy2671 269 KNGVIHAWDSSTGKQIGQPMR-----GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT 343 (573)
Q Consensus 269 ~dg~i~vwd~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~ 343 (573)
.++.|.++|.++++....... ........+.+. .++.+++...++.|.+||..+++.+..+.. .....
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~------~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~ 87 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR------DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPR 87 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE------TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE------CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCc
Confidence 378999999998875432211 111234445432 245667777789999999999988887753 45678
Q ss_pred EEEECCCcEEEEEe-CCCeEEEEeCCCCeeeEeccCCc-----ceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671 344 CIRWGGSGLIYSAS-QDRTIKVWRASDGVMCRTLEGHA-----HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH 417 (573)
Q Consensus 344 ~~~~~~~~~l~s~s-~d~~i~vw~~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (573)
.+++++++.++.+. .++.|.+||..++.....+.... .....+++
T Consensus 88 ~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~----------------------------- 138 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ----------------------------- 138 (328)
T ss_dssp EEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-----------------------------
T ss_pred EEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-----------------------------
Confidence 88887677777777 89999999999887665443211 01111111
Q ss_pred hhhheeeeCCCCcEEEEEe-CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC----------CcEEE
Q psy2671 418 ALAKYQAQCPEGEKLVSGS-DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD----------KSIKL 486 (573)
Q Consensus 418 ~~~~~~~~~~~~~~l~sg~-~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d----------g~i~l 486 (573)
.++..+++.. .+++|.+||+.+.+. ...+.. ......++++|+|++++++..+ +.|.+
T Consensus 139 ---------~~~~lyv~~~~~~~~v~viD~~t~~~-~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~ 207 (328)
T 3dsm_A 139 ---------YGKYVYVNCWSYQNRILKIDTETDKV-VDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYR 207 (328)
T ss_dssp ---------ETTEEEEEECTTCCEEEEEETTTTEE-EEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred ---------ECCEEEEEcCCCCCEEEEEECCCCeE-EEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEE
Confidence 1233444444 488999999987643 222322 2234678999999988877654 78999
Q ss_pred EeCCCCeEEEeecCC-cceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccc--cccCcCCCEEEEEEccC-CCEEEEe
Q psy2671 487 WDGRIGKFITTLRGH-VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ--DLPGHGDEVYAVDWAPD-GEKVASG 562 (573)
Q Consensus 487 wd~~~~~~~~~~~~h-~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~--~l~~h~~~v~~~~~s~d-~~~l~s~ 562 (573)
+|..+++....+... ......++|+||+++|+++.. .|.+||..+++... .+..+......++++|+ ++..++.
T Consensus 208 id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 208 IDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp EETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred EECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 999999877666432 235788999999999888765 89999998887642 12222457889999995 5555555
Q ss_pred ----eCCCcEEEcc
Q psy2671 563 ----GKDKVLRLWQ 572 (573)
Q Consensus 563 ----~~d~~i~iw~ 572 (573)
..++.|.+|+
T Consensus 286 ~~~y~~~~~V~v~d 299 (328)
T 3dsm_A 286 AIDYQQQGIVYRYS 299 (328)
T ss_dssp CTTSSSEEEEEEEC
T ss_pred ccccccCCEEEEEC
Confidence 5678899886
No 192
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.58 E-value=8.9e-13 Score=125.81 Aligned_cols=229 Identities=12% Similarity=0.102 Sum_probs=158.2
Q ss_pred CcccEEEEEecccccCCCCC-EEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeC-CCeEEEEeCC
Q psy2671 291 HKQWITALSWEPFHLNHQCR-RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ-DRTIKVWRAS 368 (573)
Q Consensus 291 h~~~v~~~~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~-d~~i~vw~~~ 368 (573)
+.....++.|.| +++ .++++..++.|..|+...+ ...+..+...+.++++++++.++.+.. ++.|.+|+..
T Consensus 26 ~~~~~eg~~~d~-----~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 26 GFTWTEGPVYVP-----ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp CCSSEEEEEEEG-----GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred CCccccCCeEeC-----CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 344566777776 445 6778888999999999877 556666777899999998886666654 6899999987
Q ss_pred CCeeeEeccCCc----ceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEE----e----
Q psy2671 369 DGVMCRTLEGHA----HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG----S---- 436 (573)
Q Consensus 369 ~~~~~~~~~~~~----~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg----~---- 436 (573)
++.......... ..++.++ ..|+|.++++. .
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~-------------------------------------~d~~G~l~vtd~~~g~~~~~ 141 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVC-------------------------------------LAPDGSLWFSDPTYGIDKPE 141 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEE-------------------------------------ECTTSCEEEEECSHHHHCGG
T ss_pred CCcEEEEeeccCCCCCCCCCCEE-------------------------------------ECCCCCEEEECCcccccccc
Confidence 776432221100 0111222 23556666652 2
Q ss_pred ---------CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCC-CCeE---EEeecCCcc
Q psy2671 437 ---------DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR-IGKF---ITTLRGHVQ 503 (573)
Q Consensus 437 ---------~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~-~~~~---~~~~~~h~~ 503 (573)
..+.|..++.. + ....+..+....+.++|+|+|+.+++.+.++.|.+||.. .++. ...+..+..
T Consensus 142 ~~~~~~~~~~~~~l~~~~~~-g--~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 218 (296)
T 3e5z_A 142 EGYGGEMELPGRWVFRLAPD-G--TLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPG 218 (296)
T ss_dssp GSSCCCCCSSSCEEEEECTT-S--CEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSS
T ss_pred ccccccccCCCcEEEEECCC-C--CEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCC
Confidence 13456666654 2 233344555667899999999999777888999999986 4544 233333444
Q ss_pred eEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEE-ccCCCEEEEeeCCCcEEE
Q psy2671 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDW-APDGEKVASGGKDKVLRL 570 (573)
Q Consensus 504 ~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~-s~d~~~l~s~~~d~~i~i 570 (573)
.+..++++++|++.++. ++.|.+|+.. ++.+..+..+.. +.+++| +|+++.|..++.++..++
T Consensus 219 ~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 219 KTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp CCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred CCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEE
Confidence 56678999999877666 7889999986 666666666666 889999 589999999888865543
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.57 E-value=1.4e-12 Score=122.55 Aligned_cols=242 Identities=8% Similarity=-0.031 Sum_probs=149.2
Q ss_pred cEEEEEEcCCCCeEE-EEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671 209 AVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287 (573)
Q Consensus 209 ~V~~~~fsp~g~~la-s~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~ 287 (573)
...+++++|+|+..+ +.+.++.|.+||..+.........+...+.+++++++|+.+++.. ++.|.+||........ .
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~-~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTV-L 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEE-C
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEee-e
Confidence 678999999998766 447789999999766543322223334678899999998555555 8899999987654321 1
Q ss_pred ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeC
Q psy2671 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRA 367 (573)
Q Consensus 288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~ 367 (573)
.......+.++.+.+ +++.+++...++.|.+|+................+.++++.+
T Consensus 103 ~~~~~~~p~~i~~~~-----~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~------------------ 159 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDT-----QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN------------------ 159 (270)
T ss_dssp CCCSCSSEEEEEECT-----TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECT------------------
T ss_pred ecCCcCCCcceEECC-----CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeC------------------
Confidence 112224566666654 455666656667777775433222111111111223333333
Q ss_pred CCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCC
Q psy2671 368 SDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447 (573)
Q Consensus 368 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~ 447 (573)
+|.++++...++.|.+|+..
T Consensus 160 ------------------------------------------------------------~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 160 ------------------------------------------------------------SGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp ------------------------------------------------------------TCCEEEEEGGGTEEEEECTT
T ss_pred ------------------------------------------------------------CCCEEEEECCCCEEEEEecC
Confidence 34444444444555666554
Q ss_pred CCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEE
Q psy2671 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527 (573)
Q Consensus 448 ~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~ 527 (573)
...... ....+...+.+++++++|.++++...++.|.+||............+...+..++++++|+++++...++.|+
T Consensus 180 ~~~~~~-~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 180 SNNQVV-LPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp TCCEEE-CCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred CCceEe-ecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence 332111 1112224578899999998888887889999999876543333333445688999999999888888999999
Q ss_pred EEeCCcccc
Q psy2671 528 VWNMKTKKI 536 (573)
Q Consensus 528 vwd~~~~~~ 536 (573)
+|++...+.
T Consensus 259 ~~~~~~~~~ 267 (270)
T 1rwi_B 259 KLTSLEHHH 267 (270)
T ss_dssp EECCCGGGS
T ss_pred EEcCCCccc
Confidence 999876543
No 194
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.57 E-value=1.4e-12 Score=124.47 Aligned_cols=242 Identities=13% Similarity=0.109 Sum_probs=159.5
Q ss_pred EEecCCCCcEEEEEEcCCCC-eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcE
Q psy2671 243 FKCEGHKHWVLCIAWSPDSK-QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321 (573)
Q Consensus 243 ~~~~~h~~~V~~v~~s~dg~-~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v 321 (573)
..+..+.....+++|+|+|+ .++++..++.|..|+..++ . ..+..+...+.++++.| +++.+++...++.|
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~--~~~~~~~~~~~~l~~~~-----dg~l~v~~~~~~~i 92 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L--SPEMHPSHHQNGHCLNK-----QGHLIACSHGLRRL 92 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E--EEEESSCSSEEEEEECT-----TCCEEEEETTTTEE
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e--EEEECCCCCcceeeECC-----CCcEEEEecCCCeE
Confidence 33444556678999999998 6778888999999999877 2 23344556678888765 56777776667899
Q ss_pred EEEECCCCeEEEEecCC----CccEEEEEECCCcEEEEE-----eC-------------CCeEEEEeCCCCeeeEeccCC
Q psy2671 322 RIWDVILSQCVRVLTSH----TRSVTCIRWGGSGLIYSA-----SQ-------------DRTIKVWRASDGVMCRTLEGH 379 (573)
Q Consensus 322 ~iwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~l~s~-----s~-------------d~~i~vw~~~~~~~~~~~~~~ 379 (573)
.+||..+++........ ...+..+++.++|.++.+ +. .+.|..++.. +.. ..+..+
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~ 170 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRD 170 (296)
T ss_dssp EEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECC
T ss_pred EEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecC
Confidence 99999777654433221 123567888888865553 21 2344444433 322 222222
Q ss_pred cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccc---eeee
Q psy2671 380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS---LARM 456 (573)
Q Consensus 380 ~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~---~~~~ 456 (573)
....+.+++ .|+++.+++.+.++.|++|++...... ...+
T Consensus 171 ~~~~~gi~~-------------------------------------s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~ 213 (296)
T 3e5z_A 171 RVKPNGLAF-------------------------------------LPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF 213 (296)
T ss_dssp CSSEEEEEE-------------------------------------CTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE
T ss_pred CCCCccEEE-------------------------------------CCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe
Confidence 222233333 366777777778899999998622221 1122
Q ss_pred ccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEE-CCCCCEEEEEeCCCcEEEEeCCccc
Q psy2671 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW-SSDSRLLVSGSADSTLKVWNMKTKK 535 (573)
Q Consensus 457 ~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~-s~dg~~las~s~D~~v~vwd~~~~~ 535 (573)
..+...+.+++++++|+++++. ++.|.+||.. ++.+..+..+.. +.+++| +|+++.|++++.++ +.-++.++.+
T Consensus 214 ~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 214 TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 2234456789999999977766 7899999986 777777777766 889999 68999998888764 4444555544
Q ss_pred c
Q psy2671 536 I 536 (573)
Q Consensus 536 ~ 536 (573)
+
T Consensus 289 ~ 289 (296)
T 3e5z_A 289 L 289 (296)
T ss_dssp C
T ss_pred c
Confidence 3
No 195
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.57 E-value=5.4e-11 Score=113.35 Aligned_cols=274 Identities=12% Similarity=0.044 Sum_probs=179.3
Q ss_pred CCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC
Q psy2671 248 HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI 327 (573)
Q Consensus 248 h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 327 (573)
......+++++++|+..++...++.|.+||.. ++............+.++.+.+ +++.+++...++.|..||..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~-----~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSS-----LGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-----TSCEEEEETTTTEEEEECTT
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECC-----CCCEEEEecCCCeEEEECCC
Confidence 34567899999999877776678999999987 5543222233335577777653 55667766667889999987
Q ss_pred CCeEEE-EecCCCccEEEEEECCCcEEEEEeC-CCeEEEEeCCCCeeeE-eccCCcceeeEEEeccCceeEEEEcCCCce
Q psy2671 328 LSQCVR-VLTSHTRSVTCIRWGGSGLIYSASQ-DRTIKVWRASDGVMCR-TLEGHAHWVNTLALSTDYLMRVEATSTGGF 404 (573)
Q Consensus 328 ~~~~~~-~~~~h~~~v~~~~~~~~~~l~s~s~-d~~i~vw~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~ 404 (573)
++... .+......+.++++.+++.++.+.. ++.|..++.. +.... .+.........+++
T Consensus 92 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~---------------- 153 (300)
T 2qc5_A 92 -GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITL---------------- 153 (300)
T ss_dssp -SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEE----------------
T ss_pred -CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEE----------------
Confidence 54432 2233446688999988876666554 7889888876 44331 11111112222222
Q ss_pred eeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcE
Q psy2671 405 KYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI 484 (573)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i 484 (573)
.+++...++...++.|..++. ++.........+...+..++++++|++.++....+.|
T Consensus 154 ---------------------d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 211 (300)
T 2qc5_A 154 ---------------------GSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKI 211 (300)
T ss_dssp ---------------------CTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred ---------------------CCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEE
Confidence 255666666666788999987 3322222222334568899999999888877777889
Q ss_pred EEEeCCCCeEEEe-ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc-ccccCcCCCEEEEEEccCCCEEEEe
Q psy2671 485 KLWDGRIGKFITT-LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE-QDLPGHGDEVYAVDWAPDGEKVASG 562 (573)
Q Consensus 485 ~lwd~~~~~~~~~-~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~-~~l~~h~~~v~~~~~s~d~~~l~s~ 562 (573)
..||. +++.... +..+...+.+++++++|++.++...++.|..|+.. ++.. ..+......+.++.+.++|+..++.
T Consensus 212 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 212 GRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFAL 289 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEEC
T ss_pred EEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEc
Confidence 99998 5544332 34445668899999999977777677899999984 4332 2234344568889999999866655
Q ss_pred eCCCcEEEc
Q psy2671 563 GKDKVLRLW 571 (573)
Q Consensus 563 ~~d~~i~iw 571 (573)
. . .|..+
T Consensus 290 ~-~-~i~~~ 296 (300)
T 2qc5_A 290 K-C-KIGKL 296 (300)
T ss_dssp S-S-EEEEE
T ss_pred c-C-ceEEe
Confidence 4 4 44443
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.56 E-value=2.2e-12 Score=121.11 Aligned_cols=236 Identities=8% Similarity=0.014 Sum_probs=157.6
Q ss_pred cEEEEEecccccCCCCCEEE-EEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCee
Q psy2671 294 WITALSWEPFHLNHQCRRFA-SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVM 372 (573)
Q Consensus 294 ~v~~~~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~ 372 (573)
...++++.+ +++.++ +.+.++.|..|+............+...+.++++.+++.++.+..++.|..|+......
T Consensus 25 ~p~~i~~~~-----~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDS-----AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECT-----TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCC
T ss_pred CccceEECC-----CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceE
Confidence 445666544 556666 44678899999876544332222333567788998887777776688999999765433
Q ss_pred eEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccc
Q psy2671 373 CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452 (573)
Q Consensus 373 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~ 452 (573)
.............+++ .++|..+++...++.|.+|+..+....
T Consensus 100 ~~~~~~~~~~p~~i~~-------------------------------------~~~g~l~v~~~~~~~i~~~~~~~~~~~ 142 (270)
T 1rwi_B 100 TVLPFDGLNYPEGLAV-------------------------------------DTQGAVYVADRGNNRVVKLAAGSKTQT 142 (270)
T ss_dssp EECCCCSCSSEEEEEE-------------------------------------CTTCCEEEEEGGGTEEEEECTTCCSCE
T ss_pred eeeecCCcCCCcceEE-------------------------------------CCCCCEEEEECCCCEEEEEECCCceeE
Confidence 2111111112222222 255677777777889999976543322
Q ss_pred eeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532 (573)
Q Consensus 453 ~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~ 532 (573)
.. .......+.+++++|+|+++++...++.|.+||............+...+..++++++|.++++...++.|.+|+..
T Consensus 143 ~~-~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 143 VL-PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp EC-CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred ee-ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 11 12222356789999999988887778999999988766544433444668899999999888877788999999997
Q ss_pred cccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 533 TKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 533 ~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
+.........+...+.+++++++|+.+++...++.|++++
T Consensus 222 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 222 STTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp CSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred CCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence 6554333333345789999999999888888999999885
No 197
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.56 E-value=6e-11 Score=116.45 Aligned_cols=283 Identities=12% Similarity=0.007 Sum_probs=175.8
Q ss_pred EEcCCCCeEEEEeC--CC---eEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe----------eCCeEEEEEC
Q psy2671 214 KFSPNGRSLASGSG--DT---TVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC----------KNGVIHAWDS 278 (573)
Q Consensus 214 ~fsp~g~~las~s~--d~---~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs----------~dg~i~vwd~ 278 (573)
...|+++++..+.. .. +|.++|..+++.+..+..-..+ .++|+|||++|+++. .++.|.+||.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 34578877766653 22 8999999999887776543333 899999999998876 3678999999
Q ss_pred CCCceecccccC-C-----cccEEEEEecccccCCCCCEEEEEeC--CCcEEEEECCCCeEEEE-ecCCCccEEEEEECC
Q psy2671 279 STGKQIGQPMRG-H-----KQWITALSWEPFHLNHQCRRFASSGK--DGAIRIWDVILSQCVRV-LTSHTRSVTCIRWGG 349 (573)
Q Consensus 279 ~~~~~~~~~~~~-h-----~~~v~~~~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~ 349 (573)
.+.+.+.....+ . ......+.++ ++++++..+.. ++.|.++| .+++.+.. +.... .+. +...+
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~s-----pDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-~~~-~~~~~ 176 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANT-----PNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-CYH-IHPGA 176 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEEC-----CCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-eEE-EEeCC
Confidence 877654322111 0 0112344444 47888887764 57899999 98887766 54321 121 11122
Q ss_pred CcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC
Q psy2671 350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG 429 (573)
Q Consensus 350 ~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (573)
...+++.+.|+.+.+++. ++.......... +. ....... ......+.+
T Consensus 177 ~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~--~~---~~~~p~~--------------------------~~~~~~~~~ 224 (373)
T 2mad_H 177 PSTFYLLCAQGGLAKTDH-AGGAAGAGLVGA--ML---TAAQNLL--------------------------TQPAQANKS 224 (373)
T ss_pred CceEEEEcCCCCEEEEEC-CCcEEEEEeccc--cc---cCCccee--------------------------ecceeEecC
Confidence 235667778999999998 765542211000 00 0000000 000011222
Q ss_pred cEEEEEeCCCeEEEEcCCCCccc-eeeecc----------ccccEEEEEECCCCCEEEEeeC----------CCcEEEEe
Q psy2671 430 EKLVSGSDDFTLFLWNPEKEKKS-LARMTG----------HQQLINCVEFSPDGRIIASASF----------DKSIKLWD 488 (573)
Q Consensus 430 ~~l~sg~~dg~i~lwd~~~~~~~-~~~~~~----------h~~~v~~v~~sp~g~~las~s~----------dg~i~lwd 488 (573)
..++..+..+.+.+.|+...... ...+.- .......++++|+++.+.++.. ++.|.++|
T Consensus 225 ~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID 304 (373)
T 2mad_H 225 GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence 33333336678888887543211 111100 0122344789999988777643 35799999
Q ss_pred CCCCeEEEeecCCcceEEEEEECCCCC-EEEEEe-CCCcEEEEeCCccccccc
Q psy2671 489 GRIGKFITTLRGHVQAVYMVAWSSDSR-LLVSGS-ADSTLKVWNMKTKKIEQD 539 (573)
Q Consensus 489 ~~~~~~~~~~~~h~~~v~~v~~s~dg~-~las~s-~D~~v~vwd~~~~~~~~~ 539 (573)
..+++.+..+... .....++|+|||+ +++++. .++.|.+||+.+++.+..
T Consensus 305 ~~t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 305 GLVGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCCCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 9999988887533 2578999999999 777777 589999999999988776
No 198
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.56 E-value=4.2e-12 Score=122.92 Aligned_cols=299 Identities=12% Similarity=0.018 Sum_probs=188.8
Q ss_pred EEEcCCCCeEEEEeC-----CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe----------eCCeEEEEE
Q psy2671 213 VKFSPNGRSLASGSG-----DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC----------KNGVIHAWD 277 (573)
Q Consensus 213 ~~fsp~g~~las~s~-----d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs----------~dg~i~vwd 277 (573)
....|+++.+..... +++|.+.|..+++.+.++..-..+ . ++++|||++++++. .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 345789988877765 689999999999988777644444 3 99999999988775 367899999
Q ss_pred CCCCceecccccCC------cccEEEEEecccccCCCCCEEEEEeC--CCcEEEEECCCCeEEEEecCCCccEEEEEECC
Q psy2671 278 SSTGKQIGQPMRGH------KQWITALSWEPFHLNHQCRRFASSGK--DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG 349 (573)
Q Consensus 278 ~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~ 349 (573)
..+++.+.....+. ......+. ++++++++..+.. ++.|.++|+.+.+.+..+.... ...+.-.+
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a-----~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~~~~~P~g 188 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTS-----LTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--CYHIFPTA 188 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEE-----ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--EEEEEEEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEE-----EcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--cceeecCC
Confidence 99887654321110 00111223 3457887776653 6899999999999888775322 11111112
Q ss_pred CcEEEEEeCCCeEEEEeCCC-CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee-CC
Q psy2671 350 SGLIYSASQDRTIKVWRASD-GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ-CP 427 (573)
Q Consensus 350 ~~~l~s~s~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 427 (573)
...+++.+.||++.+.++.+ +........+. ..+ ....+ ....+ .+
T Consensus 189 ~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~--------~~~----------~~~~~--------------~~~~~~~~ 236 (386)
T 3sjl_D 189 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVF--------HPE----------DEFLI--------------NHPAYSQK 236 (386)
T ss_dssp TTEEEEEETTSCEEEEECCSSSCCEEEECCCC--------SCT----------TSCBC--------------SCCEEETT
T ss_pred CceeEEECCCCCEEEEECCCCCeEEEeeccee--------ccc----------ccccc--------------ccceeEcC
Confidence 33567888899999888865 44321110000 000 00000 00011 24
Q ss_pred CCcEEEEEeCCCeEEEEcCCCCcc-ceeeec---------c-ccccEEEEEECCCCCEEEEeeC----------CCcEEE
Q psy2671 428 EGEKLVSGSDDFTLFLWNPEKEKK-SLARMT---------G-HQQLINCVEFSPDGRIIASASF----------DKSIKL 486 (573)
Q Consensus 428 ~~~~l~sg~~dg~i~lwd~~~~~~-~~~~~~---------~-h~~~v~~v~~sp~g~~las~s~----------dg~i~l 486 (573)
+|.++ -.+.+|++.+.|..+... ....+. + .......++++|+++.+..... ...|.+
T Consensus 237 dG~~~-~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v 315 (386)
T 3sjl_D 237 AGRLV-WPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 315 (386)
T ss_dssp TTEEE-EEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCcEE-EEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE
Confidence 45443 366689999999865432 111111 0 1112334788999998887643 246999
Q ss_pred EeCCCCeEEEeecCCcceEEEEEECCCCC-EEEEE-eCCCcEEEEeCCcccccccccCcCCCEEEEEEccC
Q psy2671 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSR-LLVSG-SADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPD 555 (573)
Q Consensus 487 wd~~~~~~~~~~~~h~~~v~~v~~s~dg~-~las~-s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d 555 (573)
.|..+++.+..+..- ..++.+++++|++ +|+++ ..++.|.++|..+++.+++++.- +.-+.+.+++|
T Consensus 316 iD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 316 LDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp EETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred EECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 999999988887632 3678999999997 66664 55899999999999988766532 12234556665
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.54 E-value=3.3e-12 Score=120.03 Aligned_cols=220 Identities=10% Similarity=0.020 Sum_probs=149.2
Q ss_pred CCCeEEEEeCCCeEEEEECCCCeeeEEecCCC-CcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEE
Q psy2671 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHK-HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWIT 296 (573)
Q Consensus 218 ~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~-~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~ 296 (573)
.++.|++++.|+.|.+||.++++.+.++..+. ..+.+++++|+|+.++ +.++.|..||. +|+.+.+...+....+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 35689999999999999999999999988776 4688999999999888 45788999999 78776543333233455
Q ss_pred EEEecccccCCCCCEEEEEeC-CCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEe
Q psy2671 297 ALSWEPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRT 375 (573)
Q Consensus 297 ~~~~~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~ 375 (573)
++.+. ++++.+++.+. ++.+..+|. .++.+..+. +..+.
T Consensus 81 ~~~~~-----~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~------------------------------~~~~~---- 120 (276)
T 3no2_A 81 TARIL-----PDGNALVAWCGHPSTILEVNM-KGEVLSKTE------------------------------FETGI---- 120 (276)
T ss_dssp EEEEC-----TTSCEEEEEESTTEEEEEECT-TSCEEEEEE------------------------------ECCSC----
T ss_pred ccEEC-----CCCCEEEEecCCCCEEEEEeC-CCCEEEEEe------------------------------ccCCC----
Confidence 55543 36777877665 555555553 333332221 10000
Q ss_pred ccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceee
Q psy2671 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR 455 (573)
Q Consensus 376 ~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~ 455 (573)
...|.. ... ....++|.++++...++.|..||.. ++. +..
T Consensus 121 ~~~~~~-~~~-------------------------------------v~~~~~G~~lv~~~~~~~v~~~d~~-G~~-~w~ 160 (276)
T 3no2_A 121 ERPHAQ-FRQ-------------------------------------INKNKKGNYLVPLFATSEVREIAPN-GQL-LNS 160 (276)
T ss_dssp SSGGGS-CSC-------------------------------------CEECTTSCEEEEETTTTEEEEECTT-SCE-EEE
T ss_pred Cccccc-ccC-------------------------------------ceECCCCCEEEEecCCCEEEEECCC-CCE-EEE
Confidence 000000 000 0112567788888888888888876 433 333
Q ss_pred eccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc------ceEEEEEECCCCCEEEEEe
Q psy2671 456 MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV------QAVYMVAWSSDSRLLVSGS 521 (573)
Q Consensus 456 ~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~------~~v~~v~~s~dg~~las~s 521 (573)
+... ....++.+.++|+++++++.++.|..+|..+|+.+..+..+. ..+..++..++|..+++..
T Consensus 161 ~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 161 VKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 3322 335567889999999999988899999999999988875332 2377888999999988774
No 200
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.54 E-value=2.5e-12 Score=120.78 Aligned_cols=212 Identities=13% Similarity=0.109 Sum_probs=158.2
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEecCCC-ccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCc-ceeeE
Q psy2671 308 QCRRFASSGKDGAIRIWDVILSQCVRVLTSHT-RSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHA-HWVNT 385 (573)
Q Consensus 308 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~-~~v~~ 385 (573)
.++.+++++.++.|.+||..+++.+..+..+. ..+.++.+.+++.++. +.++.|..||. +|+.+..+..+. ..+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 35678999999999999999999998888766 4678888988886655 66888999998 787776665431 22322
Q ss_pred EEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC-CCeEEEEcCCCCccceeeec------c
Q psy2671 386 LALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD-DFTLFLWNPEKEKKSLARMT------G 458 (573)
Q Consensus 386 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-dg~i~lwd~~~~~~~~~~~~------~ 458 (573)
..+ .++|..+++.+. ++.+..+|... + .+..+. +
T Consensus 82 ~~~-------------------------------------~~dG~~lv~~~~~~~~v~~vd~~G-k-~l~~~~~~~~~~~ 122 (276)
T 3no2_A 82 ARI-------------------------------------LPDGNALVAWCGHPSTILEVNMKG-E-VLSKTEFETGIER 122 (276)
T ss_dssp EEE-------------------------------------CTTSCEEEEEESTTEEEEEECTTS-C-EEEEEEECCSCSS
T ss_pred cEE-------------------------------------CCCCCEEEEecCCCCEEEEEeCCC-C-EEEEEeccCCCCc
Confidence 222 366888888777 77787787632 2 222111 2
Q ss_pred ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccc
Q psy2671 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ 538 (573)
Q Consensus 459 h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~ 538 (573)
+......+++.++|+++++.+.++.|..||.. |+.+.++..+ ...+.+.+.++|+.+++++.++.|..+|..+++.+.
T Consensus 123 ~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 123 PHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp GGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEE
T ss_pred ccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEE
Confidence 22345567889999999999999999999988 9998888764 345567889999999999888899999999888876
Q ss_pred cccCcC------CCEEEEEEccCCCEEEEe
Q psy2671 539 DLPGHG------DEVYAVDWAPDGEKVASG 562 (573)
Q Consensus 539 ~l~~h~------~~v~~~~~s~d~~~l~s~ 562 (573)
.+..+. ..+..+...++|..+++.
T Consensus 201 ~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 201 RVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EecCCCCCCccccccccceEcCCCCEEEEe
Confidence 654321 237788888999888876
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.51 E-value=1.9e-12 Score=140.05 Aligned_cols=219 Identities=18% Similarity=0.078 Sum_probs=141.6
Q ss_pred CccccEEEEEEcCCCCeeEEeeCC-----CcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671 108 GHAEAVISVKFSPNGRSLASGSGD-----TTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD 182 (573)
Q Consensus 108 gH~~~V~~l~~s~~~~~lat~s~D-----~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (573)
+|+..+.+++|||||++||.++.+ .+|++||+.+++.+...
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~---------------------------------- 205 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE---------------------------------- 205 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE----------------------------------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc----------------------------------
Confidence 455678899999999999987653 46999999987643100
Q ss_pred EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCe--------------EEEEECCCCe----eeEE
Q psy2671 183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTT--------------VRFWDVTTQT----PLFK 244 (573)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~--------------i~iwd~~~~~----~~~~ 244 (573)
.+...+..++|+|| +.|+.++.|.. |++|++.++. .++.
T Consensus 206 ----------------------~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~ 262 (741)
T 1yr2_A 206 ----------------------LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFA 262 (741)
T ss_dssp ----------------------EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEEC
T ss_pred ----------------------CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEec
Confidence 00001235789999 99998887654 8999987764 3333
Q ss_pred ecCCCCcEEEEEEcCCCCeEEEEeeCC-----eEEEEECCCCcee-cccccCCcccEEEEEecccccCCCCCEEEEEeC-
Q psy2671 245 CEGHKHWVLCIAWSPDSKQLVSGCKNG-----VIHAWDSSTGKQI-GQPMRGHKQWITALSWEPFHLNHQCRRFASSGK- 317 (573)
Q Consensus 245 ~~~h~~~V~~v~~s~dg~~l~sgs~dg-----~i~vwd~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~- 317 (573)
...+...+.++.|||||++|+..+.++ .|.+||+.++... ...+..+...+....+ ++++.|+..+.
T Consensus 263 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~------~dg~~l~~~s~~ 336 (741)
T 1yr2_A 263 TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVD------GVGDQLWFVSGD 336 (741)
T ss_dssp CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEE------EETTEEEEEECT
T ss_pred cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEe------ccCCEEEEEECC
Confidence 344545689999999999998877654 8999999876211 1223333333333222 24666766665
Q ss_pred ---CCcEEEEECCCC--eEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCC-CCeeeEeccCC-cceeeEEEec
Q psy2671 318 ---DGAIRIWDVILS--QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRAS-DGVMCRTLEGH-AHWVNTLALS 389 (573)
Q Consensus 318 ---dg~v~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~-~~~~~~~~~~~-~~~v~~~~~s 389 (573)
++.|.+||+..+ .....+..+...+..+.+.++..+++...|+..++|... ++...+.+..+ ...+..++++
T Consensus 337 ~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s 415 (741)
T 1yr2_A 337 GAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGR 415 (741)
T ss_dssp TCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECC
T ss_pred CCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecC
Confidence 345999998774 444555566666777888866678889999988888654 34444444432 3344444443
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.50 E-value=2.4e-12 Score=139.16 Aligned_cols=283 Identities=12% Similarity=0.029 Sum_probs=160.0
Q ss_pred cCCCCeEEEEeCCCe---EEEEEC--C---CCeeeEE------ecCCCCcEEEEEEcCCCCeEEEEeeC-----CeEEEE
Q psy2671 216 SPNGRSLASGSGDTT---VRFWDV--T---TQTPLFK------CEGHKHWVLCIAWSPDSKQLVSGCKN-----GVIHAW 276 (573)
Q Consensus 216 sp~g~~las~s~d~~---i~iwd~--~---~~~~~~~------~~~h~~~V~~v~~s~dg~~l~sgs~d-----g~i~vw 276 (573)
+|+|++++....++. -.+|.. . .+..... ..+|...+.+++|||||++||.++.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 489998876654432 555653 3 3322211 12344468899999999999877654 469999
Q ss_pred ECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEE
Q psy2671 277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSA 356 (573)
Q Consensus 277 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~ 356 (573)
|+.+|+.+.... +...+..++|.| + +.|+.++.++..+ + +.+-..
T Consensus 195 dl~tg~~~~~~~--~~~~~~~~~wsp-----D-~~l~~~~~~~~~~------~---------------------~~~~~~ 239 (741)
T 1yr2_A 195 GVADGKPLADEL--KWVKFSGLAWLG-----N-DALLYSRFAEPKE------G---------------------QAFQAL 239 (741)
T ss_dssp ETTTCCEEEEEE--EEEESCCCEEST-----T-SEEEEEECCCC-----------------------------------C
T ss_pred ECCCCCCCCccC--CCceeccEEEEC-----C-CEEEEEEecCccc------c---------------------cccccC
Confidence 999987643211 111113455554 5 6777776654310 0 000001
Q ss_pred eCCCeEEEEeCCCCe----eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE
Q psy2671 357 SQDRTIKVWRASDGV----MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL 432 (573)
Q Consensus 357 s~d~~i~vw~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 432 (573)
.....|.+|++.++. ++.....+..++..+.+ +|+|++|
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~-------------------------------------SpDG~~l 282 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASV-------------------------------------SSDGRWV 282 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE-------------------------------------CTTSCEE
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEE-------------------------------------CCCCCEE
Confidence 123345555554432 11111111112222222 3556666
Q ss_pred EEEeCC-----CeEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeCC----CcEEEEeCCCC--eEEEeecC
Q psy2671 433 VSGSDD-----FTLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASFD----KSIKLWDGRIG--KFITTLRG 500 (573)
Q Consensus 433 ~sg~~d-----g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~d----g~i~lwd~~~~--~~~~~~~~ 500 (573)
+..+.+ ..|++||+.++... ...+..+...+... ++|+|+.|+..+.+ +.|.+||..++ +....+..
T Consensus 283 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~ 361 (741)
T 1yr2_A 283 VITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE 361 (741)
T ss_dssp EEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECC
T ss_pred EEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecC
Confidence 655543 36778887654222 34444444444444 34899988877653 45999998874 34444455
Q ss_pred CcceEEEEEECCCCCEEEEEeCCCcEEEEeCC-cccccccccC-cCCCEEEEEEccCCCEEE----EeeCCCcEEEcc
Q psy2671 501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK-TKKIEQDLPG-HGDEVYAVDWAPDGEKVA----SGGKDKVLRLWQ 572 (573)
Q Consensus 501 h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~-~~~~~~~l~~-h~~~v~~~~~s~d~~~l~----s~~~d~~i~iw~ 572 (573)
+...+..++|+ ++.++++...|+..+||.+. .++..+.+.. +.+.|..+.++||++.|+ +....++|++|+
T Consensus 362 ~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 438 (741)
T 1yr2_A 362 SKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALD 438 (741)
T ss_dssp CSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEE
Confidence 55567778887 66788888899988777654 3444555553 356788999999998776 223346788775
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.47 E-value=6.3e-10 Score=109.17 Aligned_cols=248 Identities=12% Similarity=0.015 Sum_probs=146.5
Q ss_pred EEEEcCCCCeEEEEe----------CCCeEEEEECCCCeeeEEecCC-------CCcEEEEEEcCCCCeEEEEee--CCe
Q psy2671 212 SVKFSPNGRSLASGS----------GDTTVRFWDVTTQTPLFKCEGH-------KHWVLCIAWSPDSKQLVSGCK--NGV 272 (573)
Q Consensus 212 ~~~fsp~g~~las~s----------~d~~i~iwd~~~~~~~~~~~~h-------~~~V~~v~~s~dg~~l~sgs~--dg~ 272 (573)
.++|||||++++.+. .++.|.+||..+.+.+....-. ...-..++|+|||++|+++.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 788999999998875 3678999999988776654321 122357899999999998874 478
Q ss_pred EEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec-----CCCccE-EEEE
Q psy2671 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT-----SHTRSV-TCIR 346 (573)
Q Consensus 273 i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-----~h~~~v-~~~~ 346 (573)
|.++| .+++.+...+.. ... +.+.| ...+.+++.+.||.+.++|. +++...... ....++ ....
T Consensus 150 v~viD-~t~~~~~~~i~~-~~~---~~~~~----~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~ 219 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSS-PTC---YHIHP----GAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPA 219 (373)
T ss_pred EEEEE-CCCCEEeEEcCC-Cce---EEEEe----CCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecce
Confidence 99999 888765330111 111 11112 12245677788999999999 766553221 111111 1122
Q ss_pred ECC-CcEEEEEeCCCeEEEEeCCCCee--eEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhee
Q psy2671 347 WGG-SGLIYSASQDRTIKVWRASDGVM--CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ 423 (573)
Q Consensus 347 ~~~-~~~l~s~s~d~~i~vw~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (573)
+.. .+.++..+..+.+.+.|+..+.. ...+.-.........+.+... ...
T Consensus 220 ~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~---------------------------~~~ 272 (373)
T 2mad_H 220 QANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGW---------------------------QQV 272 (373)
T ss_pred eEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCce---------------------------EeE
Confidence 222 23333334677888888764421 111110000000001111100 011
Q ss_pred eeCCCCcEEEEEeC----------CCeEEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEEee-CCCcEEEEeCCC
Q psy2671 424 AQCPEGEKLVSGSD----------DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASAS-FDKSIKLWDGRI 491 (573)
Q Consensus 424 ~~~~~~~~l~sg~~----------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las~s-~dg~i~lwd~~~ 491 (573)
..+|++..+..+.. .+.|.++|+.+.+. ...+.. .....+++|+|||+ +++++. .++.|.++|..+
T Consensus 273 ~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v-v~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 273 AYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT-SSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred EECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEE-EEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 23456666555432 35799999877543 333322 22478999999999 777776 589999999999
Q ss_pred CeEEEee
Q psy2671 492 GKFITTL 498 (573)
Q Consensus 492 ~~~~~~~ 498 (573)
++.+..+
T Consensus 351 ~~vv~~i 357 (373)
T 2mad_H 351 GDQDQST 357 (373)
T ss_pred CCEEeee
Confidence 9988773
No 204
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.47 E-value=2.5e-11 Score=117.51 Aligned_cols=261 Identities=14% Similarity=0.044 Sum_probs=155.1
Q ss_pred EEEcCCCCeEEEEe----------CCCeEEEEECCCCeeeEEecCC-------CCcEEEEEEcCCCCeEEEEee--CCeE
Q psy2671 213 VKFSPNGRSLASGS----------GDTTVRFWDVTTQTPLFKCEGH-------KHWVLCIAWSPDSKQLVSGCK--NGVI 273 (573)
Q Consensus 213 ~~fsp~g~~las~s----------~d~~i~iwd~~~~~~~~~~~~h-------~~~V~~v~~s~dg~~l~sgs~--dg~i 273 (573)
+++||||++++.+. .++.|.+||..+.+.+.++.-. ...-..++|+|||++|+++.. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 89999999887765 3678999999999887765311 112356899999999988864 6899
Q ss_pred EEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC-CeEEEEecCC----CccEE-EEEE
Q psy2671 274 HAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-SQCVRVLTSH----TRSVT-CIRW 347 (573)
Q Consensus 274 ~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~h----~~~v~-~~~~ 347 (573)
.++|+.+++.+........ ... .|. ..+.+++.+.||.+-+.++.. ++.......+ ...+. ...|
T Consensus 163 sVID~~t~~vv~tI~v~g~----~~~-~P~----g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~ 233 (386)
T 3sjl_D 163 GVVDLEGKAFKRMLDVPDC----YHI-FPT----APDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAY 233 (386)
T ss_dssp EEEETTTTEEEEEEECCSE----EEE-EEE----ETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEE
T ss_pred EEEECCCCcEEEEEECCCc----cee-ecC----CCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccccccee
Confidence 9999999876543211111 111 121 235677888899999999876 4432211111 11111 1244
Q ss_pred -CCCcEEEEEeCCCeEEEEeCCCCee--eEeccCCcc-eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhee
Q psy2671 348 -GGSGLIYSASQDRTIKVWRASDGVM--CRTLEGHAH-WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ 423 (573)
Q Consensus 348 -~~~~~l~s~s~d~~i~vw~~~~~~~--~~~~~~~~~-~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (573)
.+++.++-.+.++++.+.|...+.. ...+.--.. .+. ..+.+.. ....
T Consensus 234 ~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~-~g~~p~g---------------------------~q~~ 285 (386)
T 3sjl_D 234 SQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERA-DGWRPGG---------------------------WQQV 285 (386)
T ss_dssp ETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHH-TTEEECS---------------------------SSCE
T ss_pred EcCCCcEEEEeCCCEEEEEECCCCcceeecceecccccccc-ccccCCC---------------------------ccee
Confidence 3566555577789999999865532 111110000 000 0000000 0001
Q ss_pred eeCCCCcEEEEEeC----------CCeEEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEE-eeCCCcEEEEeCCC
Q psy2671 424 AQCPEGEKLVSGSD----------DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIAS-ASFDKSIKLWDGRI 491 (573)
Q Consensus 424 ~~~~~~~~l~sg~~----------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las-~s~dg~i~lwd~~~ 491 (573)
...+++..+..... ...|.+.|+.+.+.......++ .+..|+|+||++ +|++ ...++.|.++|..+
T Consensus 286 a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~--~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 286 AYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH--EIDSINVSQDEKPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp EEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--EECEEEECSSSSCEEEEEETTTTEEEEEETTT
T ss_pred eECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC--CcceEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 12345555554432 2478899988765433333333 477999999997 6655 45689999999999
Q ss_pred CeEEEeecCCcceEEEEEECCC
Q psy2671 492 GKFITTLRGHVQAVYMVAWSSD 513 (573)
Q Consensus 492 ~~~~~~~~~h~~~v~~v~~s~d 513 (573)
++.+.++..-.. -+.+.+++|
T Consensus 364 ~k~~~~i~~~~~-p~~l~~s~d 384 (386)
T 3sjl_D 364 GEELRSVNQLGH-GPQVITTAD 384 (386)
T ss_dssp CCEEEEECCCCS-SCCEEEECC
T ss_pred CcEEEEecCCCC-CceeEECCc
Confidence 999888763211 123445555
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.44 E-value=9.1e-11 Score=112.70 Aligned_cols=232 Identities=10% Similarity=0.119 Sum_probs=153.8
Q ss_pred EEEEEecccccCCCCCEEEE-------EeCCCcEEEEECCCCeEEEEec----CCCccEEEEEECCC-cEEEEEeCCCeE
Q psy2671 295 ITALSWEPFHLNHQCRRFAS-------SGKDGAIRIWDVILSQCVRVLT----SHTRSVTCIRWGGS-GLIYSASQDRTI 362 (573)
Q Consensus 295 v~~~~~~~~~~~~~~~~l~s-------~~~dg~v~iwd~~~~~~~~~~~----~h~~~v~~~~~~~~-~~l~s~s~d~~i 362 (573)
..+++|.+ +++.+++ ...++.|..||..+++...... ++...+.++++.++ +.++.++..+.|
T Consensus 20 ~~~~~~~~-----~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l 94 (314)
T 1pjx_A 20 AEGPVFDK-----NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGL 94 (314)
T ss_dssp CEEEEECT-----TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEE
T ss_pred ccCceECC-----CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCE
Confidence 34566543 4556666 4678899999987776543322 24467889999988 888888777789
Q ss_pred EEEeCCCCeeeEe-ccCC----cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC
Q psy2671 363 KVWRASDGVMCRT-LEGH----AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD 437 (573)
Q Consensus 363 ~vw~~~~~~~~~~-~~~~----~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~ 437 (573)
.+|+.. +..... .... ...+..+++. ++|.+.++...
T Consensus 95 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d-------------------------------------~~g~l~v~~~~ 136 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFD-------------------------------------YEGNLWITAPA 136 (314)
T ss_dssp EEEETT-SCEEECCSBCTTSCBCBCCCEEEEC-------------------------------------TTSCEEEEECB
T ss_pred EEEeCC-CCEEEEEeccCCCccccCCcCEEEC-------------------------------------CCCCEEEEecC
Confidence 999987 654322 2110 1123333333 44555555544
Q ss_pred C---------------CeEEEEcCCCCccceeeeccccccEEEEEEC----CCCCEEEE-eeCCCcEEEEeCC-CCe---
Q psy2671 438 D---------------FTLFLWNPEKEKKSLARMTGHQQLINCVEFS----PDGRIIAS-ASFDKSIKLWDGR-IGK--- 493 (573)
Q Consensus 438 d---------------g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~s----p~g~~las-~s~dg~i~lwd~~-~~~--- 493 (573)
+ +.|..|+.. +. ...+..+......++++ |+|+.|.. ...++.|.+||.. .++
T Consensus 137 ~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~ 213 (314)
T 1pjx_A 137 GEVAPADYTRSMQEKFGSIYCFTTD-GQ--MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN 213 (314)
T ss_dssp CBCTTSCCCBTTSSSCEEEEEECTT-SC--EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE
T ss_pred cccccccccccccCCCCeEEEECCC-CC--EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc
Confidence 3 567777765 22 22222233446889999 99976544 4567899999976 443
Q ss_pred --EEEeecCCc-ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEE-EeeCCCcEE
Q psy2671 494 --FITTLRGHV-QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVA-SGGKDKVLR 569 (573)
Q Consensus 494 --~~~~~~~h~-~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~-s~~~d~~i~ 569 (573)
....+.++. .....++++++|++.++...++.|.+||..+++....+..+...+.+++|+|+++.|. +...++.|.
T Consensus 214 ~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~ 293 (314)
T 1pjx_A 214 KKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVW 293 (314)
T ss_dssp EEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred ceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEE
Confidence 233444444 5678899999999888887889999999987777666666667899999999999555 444556777
Q ss_pred Ecc
Q psy2671 570 LWQ 572 (573)
Q Consensus 570 iw~ 572 (573)
.|+
T Consensus 294 ~~~ 296 (314)
T 1pjx_A 294 KFE 296 (314)
T ss_dssp EEE
T ss_pred EEe
Confidence 664
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.44 E-value=1e-10 Score=112.29 Aligned_cols=242 Identities=11% Similarity=0.116 Sum_probs=154.9
Q ss_pred CcEEEEEEcCCCCeEEE-------EeCCCeEEEEECCCCeeeEEec----CCCCcEEEEEEcCC-CCeEEEEeeCCeEEE
Q psy2671 208 EAVISVKFSPNGRSLAS-------GSGDTTVRFWDVTTQTPLFKCE----GHKHWVLCIAWSPD-SKQLVSGCKNGVIHA 275 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las-------~s~d~~i~iwd~~~~~~~~~~~----~h~~~V~~v~~s~d-g~~l~sgs~dg~i~v 275 (573)
....+++|+++|+.+++ +..++.|.+||..+++...... ++...+.+++++++ |+ |..++..+.|.+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEETTTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEECCCCEEE
Confidence 34578999999987777 5778899999987776432221 24467899999999 65 444444557899
Q ss_pred EECCCCceecc-c--ccC-CcccEEEEEecccccCCCCCEEEEEeCC---------------CcEEEEECCCCeEEEEec
Q psy2671 276 WDSSTGKQIGQ-P--MRG-HKQWITALSWEPFHLNHQCRRFASSGKD---------------GAIRIWDVILSQCVRVLT 336 (573)
Q Consensus 276 wd~~~~~~~~~-~--~~~-h~~~v~~~~~~~~~~~~~~~~l~s~~~d---------------g~v~iwd~~~~~~~~~~~ 336 (573)
||.. ++.... . ..+ ....+.++.+.+ +++.+++...+ +.|..|+.. ++.... .
T Consensus 97 ~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-----~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~-~ 168 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-----EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV-D 168 (314)
T ss_dssp EETT-SCEEECCSBCTTSCBCBCCCEEEECT-----TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE-E
T ss_pred EeCC-CCEEEEEeccCCCccccCCcCEEECC-----CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe-c
Confidence 9988 654311 1 011 123456676654 56666666544 466667655 433322 2
Q ss_pred CCCccEEEEEEC----CCc-EEEEE-eCCCeEEEEeCC-CCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCC
Q psy2671 337 SHTRSVTCIRWG----GSG-LIYSA-SQDRTIKVWRAS-DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPA 409 (573)
Q Consensus 337 ~h~~~v~~~~~~----~~~-~l~s~-s~d~~i~vw~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~ 409 (573)
.+......++++ +++ .++.+ ..++.|.+|+.. ++....
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~----------------------------------- 213 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN----------------------------------- 213 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE-----------------------------------
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc-----------------------------------
Confidence 223345667777 766 44444 456777777643 221100
Q ss_pred CchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecccc-ccEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy2671 410 NPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ-QLINCVEFSPDGRIIASASFDKSIKLWD 488 (573)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~-~~v~~v~~sp~g~~las~s~dg~i~lwd 488 (573)
.. ....+.++. .....++++++|+++++...++.|.+||
T Consensus 214 -------------------------------~~---------~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d 253 (314)
T 1pjx_A 214 -------------------------------KK---------VWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFG 253 (314)
T ss_dssp -------------------------------EE---------EEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred -------------------------------ce---------EEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEc
Confidence 00 001111122 3356799999999998888889999999
Q ss_pred CCCCeEEEeecCCcceEEEEEECCCCCEE-EEEeCCCcEEEEeCCc
Q psy2671 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLL-VSGSADSTLKVWNMKT 533 (573)
Q Consensus 489 ~~~~~~~~~~~~h~~~v~~v~~s~dg~~l-as~s~D~~v~vwd~~~ 533 (573)
..+++.+..+..+...+.+++|+|+|+.| ++...++.|..|++..
T Consensus 254 ~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 254 PDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 98777666666666788999999999955 4555678899999865
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.41 E-value=1.5e-10 Score=114.24 Aligned_cols=282 Identities=14% Similarity=0.073 Sum_probs=177.9
Q ss_pred CCCCeEEEEeC-C----CeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe----------eCCeEEEEECCCC
Q psy2671 217 PNGRSLASGSG-D----TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC----------KNGVIHAWDSSTG 281 (573)
Q Consensus 217 p~g~~las~s~-d----~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs----------~dg~i~vwd~~~~ 281 (573)
|+++.+..+.. + ++|.+.|..+++.+.++..-..+ .++++|||++|+++. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 46666655544 2 69999999999988777644445 799999999998876 4678999999988
Q ss_pred ceecccccC-Cc-----ccEEEEEecccccCCCCCEEEEEeC--CCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEE
Q psy2671 282 KQIGQPMRG-HK-----QWITALSWEPFHLNHQCRRFASSGK--DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLI 353 (573)
Q Consensus 282 ~~~~~~~~~-h~-----~~v~~~~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l 353 (573)
+.+.....+ .. ..... +.++++++++..+.. ++.|.+.|+.+.+.+..+..-.. ..+...+...+
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~-----~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~ 232 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWM-----NALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--YHIFPASPTVF 232 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGG-----SEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEE
T ss_pred cEEEEEECCCccccccCCCcce-----EEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc--eeeccCCCcEE
Confidence 765432111 00 00111 224567888877664 57899999999988777653211 11111122355
Q ss_pred EEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671 354 YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV 433 (573)
Q Consensus 354 ~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 433 (573)
++.+.||++.+.+..++....... +. +..... .........+++..++
T Consensus 233 v~~~~dG~~~~V~~~~~~v~~~~~-~~-------------------------~~v~~~------p~~~~~~~~~dg~~~~ 280 (426)
T 3c75_H 233 YMNCRDGSLARVDFADGETKVTNT-EV-------------------------FHTEDE------LLINHPAFSLRSGRLV 280 (426)
T ss_dssp EEEETTSSEEEEECCTTCCEEEEC-CC-------------------------CSCTTS------CBCSCCEECTTTCEEE
T ss_pred EEEcCCCCEEEEECCCCcEEEEee-ee-------------------------eccCCC------ceeeEeeecCCCCEEE
Confidence 667778888777775544331110 00 000000 0000011235566666
Q ss_pred EEeCCCeEEEEcCCCCccce-eeec-------c---ccccEEEEEECCCCCEEEEeeC----------CCcEEEEeCCCC
Q psy2671 434 SGSDDFTLFLWNPEKEKKSL-ARMT-------G---HQQLINCVEFSPDGRIIASASF----------DKSIKLWDGRIG 492 (573)
Q Consensus 434 sg~~dg~i~lwd~~~~~~~~-~~~~-------~---h~~~v~~v~~sp~g~~las~s~----------dg~i~lwd~~~~ 492 (573)
..+..+.+.+.|........ ..+. . .......++|+|+++.+.++.. ++.|.+.|..++
T Consensus 281 ~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~ 360 (426)
T 3c75_H 281 WPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG 360 (426)
T ss_dssp EEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC
T ss_pred EEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC
Confidence 66677888888875432111 0000 0 0011123689999887776532 357999999999
Q ss_pred eEEEeecCCcceEEEEEECCCCC-EEEEEe-CCCcEEEEeCCcccccccc
Q psy2671 493 KFITTLRGHVQAVYMVAWSSDSR-LLVSGS-ADSTLKVWNMKTKKIEQDL 540 (573)
Q Consensus 493 ~~~~~~~~h~~~v~~v~~s~dg~-~las~s-~D~~v~vwd~~~~~~~~~l 540 (573)
+.+..+... ...+.++|+|||+ +++++. .++.|.++|+.+++.++++
T Consensus 361 kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 361 ERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp CEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred eEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 998887633 2478899999999 888887 5999999999999988775
No 208
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.37 E-value=4.1e-11 Score=116.53 Aligned_cols=180 Identities=12% Similarity=0.026 Sum_probs=132.6
Q ss_pred cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeE
Q psy2671 112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVF 191 (573)
Q Consensus 112 ~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (573)
.+..+++++...++++|+.|+ ++||++++.+...... .++ +++..
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~---------------------------~~~-----~~~~~-- 83 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSD---------------------------STP-----LTFKW-- 83 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSS---------------------------SCC-----CCCSE--
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccc---------------------------ccc-----ccceE--
Confidence 689999999999999999985 5669986532110000 000 00000
Q ss_pred EEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCC
Q psy2671 192 QVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG 271 (573)
Q Consensus 192 ~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg 271 (573)
...+.. |..++| |+++|+++ .++.|++||+.+.........|...+.++.+.+. .+++++.||
T Consensus 84 -----------~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG 146 (388)
T 1xip_A 84 -----------EKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVN 146 (388)
T ss_dssp -----------EEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTS
T ss_pred -----------EeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCC
Confidence 012445 999999 99999999 8899999999876655555667777888888754 388999999
Q ss_pred eEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE--EEEe------c---CCCc
Q psy2671 272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC--VRVL------T---SHTR 340 (573)
Q Consensus 272 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~--~~~~------~---~h~~ 340 (573)
.|.+||+.++.... +...|++++|+|. | ++.+..||++++|+...... .+.+ . +|..
T Consensus 147 ~L~v~dl~~~~~~~-----~~~~Vs~v~WSpk-----G--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~ 214 (388)
T 1xip_A 147 DLSALDLRTKSTKQ-----LAQNVTSFDVTNS-----Q--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEY 214 (388)
T ss_dssp EEEEEETTTCCEEE-----EEESEEEEEECSS-----E--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTS
T ss_pred CEEEEEccCCcccc-----ccCCceEEEEcCC-----c--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCe
Confidence 99999998776531 4568999999883 3 67899999999999877764 4555 2 3788
Q ss_pred cEEEEEECCCcEEEE
Q psy2671 341 SVTCIRWGGSGLIYS 355 (573)
Q Consensus 341 ~v~~~~~~~~~~l~s 355 (573)
.|.++.|.+++.++.
T Consensus 215 ~V~sI~wl~~~~flv 229 (388)
T 1xip_A 215 SPLSVTILSPQDFLA 229 (388)
T ss_dssp EEEEEEESSSSEEEE
T ss_pred eEEEEEEecCCeEEE
Confidence 999999998876544
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.36 E-value=8.1e-11 Score=126.03 Aligned_cols=115 Identities=21% Similarity=0.251 Sum_probs=82.1
Q ss_pred CccccEEEEEEcCCCCeeE-----EeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671 108 GHAEAVISVKFSPNGRSLA-----SGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD 182 (573)
Q Consensus 108 gH~~~V~~l~~s~~~~~la-----t~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (573)
+|...+.+++|||||++|| +|+.+.+|+|||+.+++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~----------------------------------- 170 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET----------------------------------- 170 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-----------------------------------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-----------------------------------
Confidence 5777899999999999998 444457899999998864310
Q ss_pred EEEeceeeEEEeeccccccCCCCCCCc--EEEEEEcCCCCeEEEEeCCC-------------eEEEEECCCCe----eeE
Q psy2671 183 IVYQKQAVFQVRPVTRCTSSMPGHAEA--VISVKFSPNGRSLASGSGDT-------------TVRFWDVTTQT----PLF 243 (573)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~--V~~~~fsp~g~~las~s~d~-------------~i~iwd~~~~~----~~~ 243 (573)
+... ...++|+ ||+.|+.++.+. .|++|++.++. .++
T Consensus 171 -----------------------~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~ 226 (693)
T 3iuj_A 171 -----------------------PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVF 226 (693)
T ss_dssp -----------------------EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEE
T ss_pred -----------------------ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEE
Confidence 0001 1356799 999999888774 39999988754 344
Q ss_pred EecC-CCCcEEEEEEcCCCCeEEEEee----CCeEEEEECCCC
Q psy2671 244 KCEG-HKHWVLCIAWSPDSKQLVSGCK----NGVIHAWDSSTG 281 (573)
Q Consensus 244 ~~~~-h~~~V~~v~~s~dg~~l~sgs~----dg~i~vwd~~~~ 281 (573)
.... |...+.++.|||||++|+.... +..|.+||+.++
T Consensus 227 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 227 GAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE 269 (693)
T ss_dssp SCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST
T ss_pred ecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC
Confidence 4444 5566889999999998865433 246777777554
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.36 E-value=9.4e-10 Score=109.50 Aligned_cols=233 Identities=11% Similarity=0.126 Sum_probs=153.9
Q ss_pred CcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCC--cEEEEECC
Q psy2671 250 HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG--AIRIWDVI 327 (573)
Q Consensus 250 ~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg--~v~iwd~~ 327 (573)
.....|+|+++++.+++...++.|++||..++..... .... .... ++|.| +++.+..+..++ .|..++..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~-~~~~-~~~~-ia~~~-----~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTV-HPGF-KGGK-PAVTK-----DKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEE-EETC-CBCB-CEECT-----TSSEEEEEBSSTTCEEEEEEGG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEe-eccC-CCCc-eeEec-----CCCcEEEEecCCCceEEEEEcC
Confidence 3478999999998777777789999999987754321 1111 1112 55544 566777777765 78888876
Q ss_pred CCeEEEEe----cCCCccEEEEEECC-CcEEEEEeCCCeEEEEeCCCCeeeEe----ccCCccee--eEEEeccCceeEE
Q psy2671 328 LSQCVRVL----TSHTRSVTCIRWGG-SGLIYSASQDRTIKVWRASDGVMCRT----LEGHAHWV--NTLALSTDYLMRV 396 (573)
Q Consensus 328 ~~~~~~~~----~~h~~~v~~~~~~~-~~~l~s~s~d~~i~vw~~~~~~~~~~----~~~~~~~v--~~~~~s~~~~~~~ 396 (573)
.+.....+ ......+.++++++ ++.|+.+..++.|..|+..++..... ..++..+- ..+
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~i---------- 272 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYL---------- 272 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEE----------
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccE----------
Confidence 55433333 22445677889988 67888888889999999876643211 11111110 022
Q ss_pred EEcCCCceeeCCCCchhhhhhhhhheeeeCC-CCcEEEEEeCCCeEEEEcCCCCccceeeecccc---------------
Q psy2671 397 EATSTGGFKYDPANPEESSKHALAKYQAQCP-EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ--------------- 460 (573)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~--------------- 460 (573)
+..| ++.++++-...+.|+.|+.... ...+.++.
T Consensus 273 ---------------------------a~~p~~g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~ 322 (409)
T 3hrp_A 273 ---------------------------IYYFVDSNFYMSDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALF 322 (409)
T ss_dssp ---------------------------EEETTTTEEEEEETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBC
T ss_pred ---------------------------EEeCCCCEEEEEeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEe
Confidence 2335 3556666677788888887643 22222221
Q ss_pred ccEEEEEECCCCCEEEEee-CCCcEEEEeCCCCeEEEeecCC---------------cceEEEEEECCCCCEEEEEeCCC
Q psy2671 461 QLINCVEFSPDGRIIASAS-FDKSIKLWDGRIGKFITTLRGH---------------VQAVYMVAWSSDSRLLVSGSADS 524 (573)
Q Consensus 461 ~~v~~v~~sp~g~~las~s-~dg~i~lwd~~~~~~~~~~~~h---------------~~~v~~v~~s~dg~~las~s~D~ 524 (573)
.....++++|+|+++++-+ .++.|+.||..+++. .++.++ ......++++++|.++++-..++
T Consensus 323 ~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~ 401 (409)
T 3hrp_A 323 AQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGK 401 (409)
T ss_dssp SSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTC
T ss_pred CCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCC
Confidence 3478899999999888877 899999999777763 444333 24578999999988888888888
Q ss_pred cEEEEeC
Q psy2671 525 TLKVWNM 531 (573)
Q Consensus 525 ~v~vwd~ 531 (573)
.|+.+++
T Consensus 402 ~Ir~i~~ 408 (409)
T 3hrp_A 402 AIRKYAV 408 (409)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 8888765
No 211
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.35 E-value=7.8e-10 Score=109.24 Aligned_cols=308 Identities=10% Similarity=-0.002 Sum_probs=186.5
Q ss_pred CCeEEEEeCCCeEEEEECCCCeeeEEecCC---------CCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccccc
Q psy2671 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGH---------KHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMR 289 (573)
Q Consensus 219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h---------~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~ 289 (573)
+..+..++.++.|..+|..+++.+...... ...+.+. ...++..++.++.++.|..+|..+|+.+.+...
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 567888888999999999999888765542 1223222 122456788899999999999999987543211
Q ss_pred CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE-----EEEEECCCcEEEEEeCCCeEEE
Q psy2671 290 GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV-----TCIRWGGSGLIYSASQDRTIKV 364 (573)
Q Consensus 290 ~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v-----~~~~~~~~~~l~s~s~d~~i~v 364 (573)
... + ...|. ..+..+..++.++.+..+|..+++............ ...... ++.++.++.++.+..
T Consensus 132 ~~~--~---~~~p~---~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~ 202 (376)
T 3q7m_A 132 AGE--A---LSRPV---VSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGAAVVGGDNGRVSA 202 (376)
T ss_dssp SSC--C---CSCCE---EETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTEEEECCTTTEEEE
T ss_pred CCc--e---EcCCE---EECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCEEEEEcCCCEEEE
Confidence 110 0 00111 123467778889999999999988776654332111 111112 467888899999999
Q ss_pred EeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEE
Q psy2671 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLW 444 (573)
Q Consensus 365 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lw 444 (573)
+|..+|+..-........-. . .. ..+. . . .......+..+..++.++.+..+
T Consensus 203 ~d~~tG~~~w~~~~~~~~~~------~---~~-----~~~~-~-~------------~~~p~~~~~~v~~~~~~g~l~~~ 254 (376)
T 3q7m_A 203 VLMEQGQMIWQQRISQATGS------T---EI-----DRLS-D-V------------DTTPVVVNGVVFALAYNGNLTAL 254 (376)
T ss_dssp EETTTCCEEEEEECCC--------------------------C-C------------CCCCEEETTEEEEECTTSCEEEE
T ss_pred EECCCCcEEEEEecccCCCC------c---cc-----cccc-c-c------------CCCcEEECCEEEEEecCcEEEEE
Confidence 99988876533321100000 0 00 0000 0 0 00000124567778889999999
Q ss_pred cCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC-CcceEEEEEECCCCCEEEEEeCC
Q psy2671 445 NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG-HVQAVYMVAWSSDSRLLVSGSAD 523 (573)
Q Consensus 445 d~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~-h~~~v~~v~~s~dg~~las~s~D 523 (573)
|..+++....... .....+.. ++..+..++.++.+..+|..+++.+..... ....+..... .+..|+.++.+
T Consensus 255 d~~tG~~~w~~~~---~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~ 327 (376)
T 3q7m_A 255 DLRSGQIMWKREL---GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSE 327 (376)
T ss_dssp ETTTCCEEEEECC---CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTT
T ss_pred ECCCCcEEeeccC---CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCC
Confidence 9887654322211 22333443 356777888899999999999988766542 1112222222 24678888899
Q ss_pred CcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 524 ~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
+.|..+|..+++.+.........+.+.-... +..|..++.+|.|+.|+
T Consensus 328 g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~-~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 328 GYLHWINVEDGRFVAQQKVDSSGFQTEPVAA-DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCTTCBCSCCEEE-TTEEEEEBTTSCEEEEE
T ss_pred CeEEEEECCCCcEEEEEecCCCcceeCCEEE-CCEEEEEeCCCEEEEEe
Confidence 9999999999987655543223332211112 45788899999998886
No 212
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.34 E-value=8.4e-11 Score=125.04 Aligned_cols=306 Identities=13% Similarity=0.134 Sum_probs=185.4
Q ss_pred CCeEEEEeCCCeEEEEECCCCeeeEEecCCCCc----------E-EEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHW----------V-LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287 (573)
Q Consensus 219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~----------V-~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~ 287 (573)
+..++.++.++.|.-+|..+++.+.+...+... + ..++. ++..|+.++.|+.|..+|..+|+.+.+.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 556777888999999999999998887543221 0 11222 3567899999999999999999876543
Q ss_pred ccC-CcccEEEEEecccccCCCCCEEEEEe------CCCcEEEEECCCCeEEEEecC--CCc------------------
Q psy2671 288 MRG-HKQWITALSWEPFHLNHQCRRFASSG------KDGAIRIWDVILSQCVRVLTS--HTR------------------ 340 (573)
Q Consensus 288 ~~~-h~~~v~~~~~~~~~~~~~~~~l~s~~------~dg~v~iwd~~~~~~~~~~~~--h~~------------------ 340 (573)
... +......+...|.. .++ .++.++ .+|.|+.||..+++.+..+.. +..
T Consensus 148 ~~~~~~~~~~~~~~sP~v--~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 224 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRV--VNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFG 224 (689)
T ss_dssp ECCSCTTSCCBCCSCCEE--ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCS
T ss_pred cCcCCCCCCccccCCcEE--ECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCC
Confidence 222 11111111111211 122 333332 378999999999987765431 000
Q ss_pred -----------cEEEEEECC-CcEEEEEeCCCe-------------------EEEEeCCCCeeeEeccC--CcceeeEEE
Q psy2671 341 -----------SVTCIRWGG-SGLIYSASQDRT-------------------IKVWRASDGVMCRTLEG--HAHWVNTLA 387 (573)
Q Consensus 341 -----------~v~~~~~~~-~~~l~s~s~d~~-------------------i~vw~~~~~~~~~~~~~--~~~~v~~~~ 387 (573)
....+.+.+ .+.++.++.++. |..+|..+|+..-.++. |..+-. .
T Consensus 225 ~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~--~ 302 (689)
T 1yiq_A 225 DAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDY--T 302 (689)
T ss_dssp STHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCC--C
T ss_pred ceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccc--c
Confidence 001344544 457888877763 88888888876644432 211100 0
Q ss_pred eccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC---cEEEEEeCCCeEEEEcCCCCccceeeeccc-----
Q psy2671 388 LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG---EKLVSGSDDFTLFLWNPEKEKKSLARMTGH----- 459 (573)
Q Consensus 388 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h----- 459 (573)
.... .... ....+| ..++.++.+|.++++|..+++........+
T Consensus 303 ~~~~-~~l~---------------------------d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~ 354 (689)
T 1yiq_A 303 ATQH-MILA---------------------------ELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTK 354 (689)
T ss_dssp CCSC-EEEE---------------------------EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred CCCC-cEEE---------------------------eeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccc
Confidence 0000 0000 000123 368888899999999988765431111000
Q ss_pred ----------------------cc-----------cEEEEEECCCCCEEEEeeC--------------------------
Q psy2671 460 ----------------------QQ-----------LINCVEFSPDGRIIASASF-------------------------- 480 (573)
Q Consensus 460 ----------------------~~-----------~v~~v~~sp~g~~las~s~-------------------------- 480 (573)
.. .-..++|+|+..++.+...
T Consensus 355 ~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 434 (689)
T 1yiq_A 355 GMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGL 434 (689)
T ss_dssp EEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSS
T ss_pred ccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCc
Confidence 00 0112688998888776532
Q ss_pred -------------------CCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccccc
Q psy2671 481 -------------------DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP 541 (573)
Q Consensus 481 -------------------dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~ 541 (573)
+|.++.||+.+++.+..++.+.. ...-.++..+.+++.++.|+.++.||.++++.+..+.
T Consensus 435 ~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 435 RTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI-FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp EECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC-ccCccceECCCEEEEECCCCcEEEEECCCCccceeee
Confidence 47899999999998887765432 2223455678899999999999999999999886665
Q ss_pred CcCC-CEEEEEEccCCCEEE
Q psy2671 542 GHGD-EVYAVDWAPDGEKVA 560 (573)
Q Consensus 542 ~h~~-~v~~~~~s~d~~~l~ 560 (573)
...+ ...-+.|+.||++.+
T Consensus 514 ~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 514 AASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp CSSCCCSCCEEEEETTEEEE
T ss_pred CCCCcccCceEEEECCEEEE
Confidence 3322 123466788887544
No 213
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.32 E-value=1.2e-09 Score=107.77 Aligned_cols=261 Identities=11% Similarity=0.063 Sum_probs=159.0
Q ss_pred CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEE
Q psy2671 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITA 297 (573)
Q Consensus 218 ~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~ 297 (573)
++..++.++.++.|..+|..+++.+................ +..++.++.++.|..+|..+|+.+....... .+..
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~--~~~~ 177 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDM--PSLS 177 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC------
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCC--Ccee
Confidence 35578888899999999999999887665433221111222 4478888999999999999998664321111 0000
Q ss_pred E--EecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc----------EEEEEECCCcEEEEEeCCCeEEEE
Q psy2671 298 L--SWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS----------VTCIRWGGSGLIYSASQDRTIKVW 365 (573)
Q Consensus 298 ~--~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~----------v~~~~~~~~~~l~s~s~d~~i~vw 365 (573)
. ...|.. .+..+..++.++.+..+|..+++........... +.......++.++.++.++.+..+
T Consensus 178 ~~~~~~~~~---~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~ 254 (376)
T 3q7m_A 178 LRGESAPTT---AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTAL 254 (376)
T ss_dssp -CCCCCCEE---ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEE
T ss_pred ecCCCCcEE---ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEE
Confidence 0 001111 1346777788999999999988876554322110 000001124678888999999999
Q ss_pred eCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEc
Q psy2671 366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN 445 (573)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd 445 (573)
|..+|+..-...... ...+. ..+..+..++.++.+..+|
T Consensus 255 d~~tG~~~w~~~~~~--~~~~~---------------------------------------~~~~~l~~~~~~g~l~~~d 293 (376)
T 3q7m_A 255 DLRSGQIMWKRELGS--VNDFI---------------------------------------VDGNRIYLVDQNDRVMALT 293 (376)
T ss_dssp ETTTCCEEEEECCCC--EEEEE---------------------------------------EETTEEEEEETTCCEEEEE
T ss_pred ECCCCcEEeeccCCC--CCCce---------------------------------------EECCEEEEEcCCCeEEEEE
Confidence 998887653322110 00000 1245677788889999999
Q ss_pred CCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEE-EEECCCCCEEEEEeCCC
Q psy2671 446 PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM-VAWSSDSRLLVSGSADS 524 (573)
Q Consensus 446 ~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~-v~~s~dg~~las~s~D~ 524 (573)
..+++............+..... .+..|+.++.+|.+..+|..+++.+.........+.. ... .+..|+.++.+|
T Consensus 294 ~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G 369 (376)
T 3q7m_A 294 IDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDG 369 (376)
T ss_dssp TTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTS
T ss_pred CCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCC
Confidence 88765433222111112222222 2467888889999999999999987766543222221 111 245777888999
Q ss_pred cEEEEe
Q psy2671 525 TLKVWN 530 (573)
Q Consensus 525 ~v~vwd 530 (573)
.|..|+
T Consensus 370 ~l~~~~ 375 (376)
T 3q7m_A 370 TVYSIT 375 (376)
T ss_dssp CEEEEE
T ss_pred EEEEEe
Confidence 999886
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.30 E-value=2.1e-10 Score=111.73 Aligned_cols=263 Identities=11% Similarity=0.045 Sum_probs=161.8
Q ss_pred CcEEEEEEcCCCCeEEEEee--CCeEEEEECCCCceec-----ccccCCcccEEEEEecccccCCCCCEEEEEeC-----
Q psy2671 250 HWVLCIAWSPDSKQLVSGCK--NGVIHAWDSSTGKQIG-----QPMRGHKQWITALSWEPFHLNHQCRRFASSGK----- 317 (573)
Q Consensus 250 ~~V~~v~~s~dg~~l~sgs~--dg~i~vwd~~~~~~~~-----~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~----- 317 (573)
.....++++|+|+.+++... ++.+++|.+.+++... ....++-..+.++.+.+ +++.+++...
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~-----~g~L~v~D~g~~~~~ 91 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDG-----NGIVWMLDNGNQSKS 91 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECS-----SSEEEEEECHHHHTS
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcC-----CCcEEEEcCCCCcCC
Confidence 56889999999998877542 3435555554554321 11123445678888765 4555554433
Q ss_pred CCcEEEEECCCCeEEEEecCC------CccEEEEEECC-CcEEEEE-e---CCCeEEEEeCCCCeeeEeccCCcceeeEE
Q psy2671 318 DGAIRIWDVILSQCVRVLTSH------TRSVTCIRWGG-SGLIYSA-S---QDRTIKVWRASDGVMCRTLEGHAHWVNTL 386 (573)
Q Consensus 318 dg~v~iwd~~~~~~~~~~~~h------~~~v~~~~~~~-~~~l~s~-s---~d~~i~vw~~~~~~~~~~~~~~~~~v~~~ 386 (573)
++.|.+||+.+++.++.+... ...+..+++.+ .+.++.+ + .++.|.+||..++...+.+.+|.....
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~-- 169 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAP-- 169 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSC--
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccc--
Confidence 578999999988866655432 23457888875 4565444 4 578999999988877666655422100
Q ss_pred EeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEE
Q psy2671 387 ALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV 466 (573)
Q Consensus 387 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v 466 (573)
+. ....++|..+.+.+.+++++.|. ..++.|
T Consensus 170 ----~~------------------------------~~~~~~g~~~~~~~~~g~~~~~~---------------~~~~gi 200 (343)
T 2qe8_A 170 ----ED------------------------------IDLVIDGVPVQIGQPDGTVIRPH---------------LGVNGI 200 (343)
T ss_dssp ----CS------------------------------CCCEETTEECBEECTTSCEECCC---------------CCEEEE
T ss_pred ----cc------------------------------cceeECCEEEEeccCCCceecee---------------ccccee
Confidence 00 00012344555566677666553 125789
Q ss_pred EECCCCCEEEEeeCCC-cEEEEeCC---CCe-----EEE--eecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc
Q psy2671 467 EFSPDGRIIASASFDK-SIKLWDGR---IGK-----FIT--TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535 (573)
Q Consensus 467 ~~sp~g~~las~s~dg-~i~lwd~~---~~~-----~~~--~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~ 535 (573)
+|+|||+.|+.+..++ .+..++.. .+. ... ...++......++++++|.++++...++.|.+||..+++
T Consensus 201 a~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 201 VLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp EECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred EeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence 9999999888887666 44444421 110 000 011222234568999999999998889999999985554
Q ss_pred cccccc-CcCCCEEEEEEccCCCEEEEeeCCCcE
Q psy2671 536 IEQDLP-GHGDEVYAVDWAPDGEKVASGGKDKVL 568 (573)
Q Consensus 536 ~~~~l~-~h~~~v~~~~~s~d~~~l~s~~~d~~i 568 (573)
...... .+.....+++|.++++.+++.+..+.+
T Consensus 281 ~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 281 YKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp EEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred EEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 322221 124568899999999887777654433
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.29 E-value=4.5e-09 Score=99.94 Aligned_cols=222 Identities=13% Similarity=0.114 Sum_probs=144.2
Q ss_pred EEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeE
Q psy2671 295 ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCR 374 (573)
Q Consensus 295 v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~ 374 (573)
..+..|.|. .+..+.+...++.|..||..++... .+ .....+.++++.+++.++.+. ++.|.+|+..++....
T Consensus 15 ~Egp~w~~~----~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 15 GESPVWEEV----SNSLLFVDIPAKKVCRWDSFTKQVQ-RV-TMDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAVV 87 (297)
T ss_dssp EEEEEEETT----TTEEEEEETTTTEEEEEETTTCCEE-EE-ECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEE
T ss_pred ccCCeEECC----CCEEEEEECCCCEEEEEECCCCcEE-EE-eCCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEE
Confidence 345555541 3345666677889999998876542 22 234678999999888777766 5689999988776432
Q ss_pred eccC----CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC-----------CC
Q psy2671 375 TLEG----HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD-----------DF 439 (573)
Q Consensus 375 ~~~~----~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-----------dg 439 (573)
.... ....++.+++. |+|.+.++... .+
T Consensus 88 ~~~~~~~~~~~~~~di~~d-------------------------------------~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVD-------------------------------------PAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp EEECCTTCSSEEEEEEEEC-------------------------------------TTSCEEEEEEECCSBTTBCCTTCE
T ss_pred EEecCCCCCCCCCCCEEEC-------------------------------------CCCCEEEecCCcccccccccCCCc
Confidence 2211 11123333333 44554443321 23
Q ss_pred eEEEEcCCCCccceeeeccccccEEEEEECCCCCEE-EEeeCCCcEEEEeC--CCCeE-----EEeecCCcceEEEEEEC
Q psy2671 440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII-ASASFDKSIKLWDG--RIGKF-----ITTLRGHVQAVYMVAWS 511 (573)
Q Consensus 440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l-as~s~dg~i~lwd~--~~~~~-----~~~~~~h~~~v~~v~~s 511 (573)
.+..++... . ...+..+....+.++|+||++.| ++.+.++.|..||. .++.. +..+..+......+++.
T Consensus 131 ~l~~~d~~g--~-~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d 207 (297)
T 3g4e_A 131 ALYSLFPDH--H-VKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCID 207 (297)
T ss_dssp EEEEECTTS--C-EEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEB
T ss_pred EEEEEECCC--C-EEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEEC
Confidence 444455432 1 12222233446889999999866 45566789999986 45542 22333344567889999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEc-cCCCEEEEee
Q psy2671 512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA-PDGEKVASGG 563 (573)
Q Consensus 512 ~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s-~d~~~l~s~~ 563 (573)
++|++.++....+.|..||..+++.+..+..+...+++++|. ||++.|..++
T Consensus 208 ~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 208 AEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp TTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred CCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 999888887778889999999888888777777789999998 8888775544
No 216
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.29 E-value=2.3e-10 Score=110.97 Aligned_cols=256 Identities=9% Similarity=-0.014 Sum_probs=146.1
Q ss_pred EEEEcCCCCeEEEEe----------CCCeEEEEECCCCeeeEEecCC--C-----CcEEEEEEcCCCCeEEEEee--CCe
Q psy2671 212 SVKFSPNGRSLASGS----------GDTTVRFWDVTTQTPLFKCEGH--K-----HWVLCIAWSPDSKQLVSGCK--NGV 272 (573)
Q Consensus 212 ~~~fsp~g~~las~s----------~d~~i~iwd~~~~~~~~~~~~h--~-----~~V~~v~~s~dg~~l~sgs~--dg~ 272 (573)
.+.|+|||++++.+. .+++|.+||..+++.+.++..+ . ..-..++|+|||++|+++.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 689999999998886 3789999999999988876422 0 12356899999999998875 467
Q ss_pred EEE--EECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC-----CeEEEE----ecCCCcc
Q psy2671 273 IHA--WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-----SQCVRV----LTSHTRS 341 (573)
Q Consensus 273 i~v--wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-----~~~~~~----~~~h~~~ 341 (573)
+.+ +|+.+-+.+ ...+. . ...| ...+.+++.+.||.+.+.|+.. ++.... +.....+
T Consensus 149 v~V~~iD~~tv~~i--~v~~~-~-----~~~p----~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P 216 (368)
T 1mda_H 149 AGLSVPGASDDQLT--KSASC-F-----HIHP----GAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA 216 (368)
T ss_dssp EEEEETTTEEEEEE--ECSSC-C-----CCEE----EETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCC
T ss_pred EEEEEEchhhceEE--ECCCc-e-----EEcc----CCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCc
Confidence 888 888661111 11110 0 0011 1123455556777777777665 221100 0000111
Q ss_pred EEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671 342 VTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421 (573)
Q Consensus 342 v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (573)
. .....+.++..+. +.+.+.|...+...
T Consensus 217 ~---~~~~~~~~~~vs~-~~V~viD~~~~~~~------------------------------------------------ 244 (368)
T 1mda_H 217 A---QANYPGMLVWAVA-SSILQGDIPAAGAT------------------------------------------------ 244 (368)
T ss_dssp E---EETTTTEEEECBS-SCCEEEECCSSCCE------------------------------------------------
T ss_pred c---ccccCCEEEEEcC-CEEEEEECCCCcce------------------------------------------------
Confidence 1 1222222222222 44444333211000
Q ss_pred eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC---------CCcEEEEeCCCC
Q psy2671 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF---------DKSIKLWDGRIG 492 (573)
Q Consensus 422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~---------dg~i~lwd~~~~ 492 (573)
.+..|.+........... ......++|+||++.+..+.. ++.+.++|..++
T Consensus 245 ------------------v~~~~~~~~~~~~~~~~~--p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~ 304 (368)
T 1mda_H 245 ------------------MKAAIDGNESGRKADNFR--SAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG 304 (368)
T ss_dssp ------------------EECCCCSSCTHHHHTTEE--ECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC
T ss_pred ------------------EEEEEEeccccccccccc--cCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC
Confidence 000111110000000000 011112689999998876533 235669999999
Q ss_pred eEEEeecCCcceEEEEEECCCCC-EEEEEe-CCCcEEEEeCCcccccccccCcCCCEEEEEEc
Q psy2671 493 KFITTLRGHVQAVYMVAWSSDSR-LLVSGS-ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA 553 (573)
Q Consensus 493 ~~~~~~~~h~~~v~~v~~s~dg~-~las~s-~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s 553 (573)
+.+..+.... ....++|+|||+ ++++.. .++.|.++|+.+++.++.++.... -..+++.
T Consensus 305 ~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~ 365 (368)
T 1mda_H 305 QTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQ 365 (368)
T ss_dssp CEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECC
T ss_pred eEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEee
Confidence 9888876543 578899999998 456666 599999999999999888875543 3455544
No 217
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.28 E-value=2.4e-10 Score=111.20 Aligned_cols=170 Identities=9% Similarity=0.069 Sum_probs=129.7
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe-----------eeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEE
Q psy2671 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-----------PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277 (573)
Q Consensus 209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~-----------~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd 277 (573)
++..+++++...++++|+.+ .+++|++.... +.... .+.. |+.|+| |++.|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 68899999999999999998 56669864322 11222 3555 999999 89999998 899999999
Q ss_pred CCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEe
Q psy2671 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSAS 357 (573)
Q Consensus 278 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s 357 (573)
+.+-... .....|+..+..+.+.+. .++.++.||.+.+||+..+.... +...|+|++|++.| ++.|.
T Consensus 113 v~sl~~~-~~~~~~~~~v~~i~~~~p-------~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG-~~vg~ 179 (388)
T 1xip_A 113 LEELSEF-RTVTSFEKPVFQLKNVNN-------TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ-LAVLL 179 (388)
T ss_dssp SSSTTCE-EEEEECSSCEEEEEECSS-------EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE-EEEEE
T ss_pred chhhhcc-CccceeecceeeEEecCC-------CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc-eEEEE
Confidence 8765432 234455666777665431 38889999999999998776643 34689999999999 78899
Q ss_pred CCCeEEEEeCCCCee--eEec------c---CCcceeeEEEeccCceeEEE
Q psy2671 358 QDRTIKVWRASDGVM--CRTL------E---GHAHWVNTLALSTDYLMRVE 397 (573)
Q Consensus 358 ~d~~i~vw~~~~~~~--~~~~------~---~~~~~v~~~~~s~~~~~~~~ 397 (573)
.||++++|+...+.. ..++ . +|...|.++.+..+..+.+.
T Consensus 180 ~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 180 KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 999999999887775 4444 3 47788999999888766554
No 218
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.28 E-value=5.5e-09 Score=99.37 Aligned_cols=227 Identities=10% Similarity=0.065 Sum_probs=144.8
Q ss_pred CCCcEEEEEEcCCCC-eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEEC
Q psy2671 248 HKHWVLCIAWSPDSK-QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326 (573)
Q Consensus 248 h~~~V~~v~~s~dg~-~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 326 (573)
+...-.+..|+|++. .+++...++.|..||..++..... .....+.++.+.+ +++++++ . ++.|.+||.
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~---~~~~~~~~i~~~~-----dG~l~v~-~-~~~l~~~d~ 80 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV---TMDAPVSSVALRQ-----SGGYVAT-I-GTKFCALNW 80 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE---ECSSCEEEEEEBT-----TSSEEEE-E-TTEEEEEET
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE---eCCCceEEEEECC-----CCCEEEE-E-CCeEEEEEC
Confidence 334567889999655 455666789999999987754211 2234677787755 5564444 4 567999999
Q ss_pred CCCeEEEEecC----CCccEEEEEECCCcEEEEEeCC----------CeEEEEeCCC-CeeeEeccCCcceeeEEEeccC
Q psy2671 327 ILSQCVRVLTS----HTRSVTCIRWGGSGLIYSASQD----------RTIKVWRASD-GVMCRTLEGHAHWVNTLALSTD 391 (573)
Q Consensus 327 ~~~~~~~~~~~----h~~~v~~~~~~~~~~l~s~s~d----------~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~ 391 (573)
.+++....... ....+..+++.+++.++.++.. ..-.+|.+.. +.... +..+....+.++
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~---- 155 (297)
T 3g4e_A 81 KEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLD---- 155 (297)
T ss_dssp TTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEE----
T ss_pred CCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceE----
Confidence 87765433221 2345788999988876665521 2334554432 22111 111111112222
Q ss_pred ceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE-EEEeCCCeEEEEcCC--CCcc----ceeeeccccccEE
Q psy2671 392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL-VSGSDDFTLFLWNPE--KEKK----SLARMTGHQQLIN 464 (573)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~sg~~dg~i~lwd~~--~~~~----~~~~~~~h~~~v~ 464 (573)
.+|+++.+ ++.+.++.|.+|++. ++.. .+..+..+.....
T Consensus 156 ---------------------------------~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~ 202 (297)
T 3g4e_A 156 ---------------------------------WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPD 202 (297)
T ss_dssp ---------------------------------ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEE
T ss_pred ---------------------------------EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCC
Confidence 33566654 555667889999763 3221 1222233345578
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEEC-CCCCEEEEEeC
Q psy2671 465 CVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS-SDSRLLVSGSA 522 (573)
Q Consensus 465 ~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s-~dg~~las~s~ 522 (573)
.++++++|++.++...++.|..||..+++.+..+..+...+++++|+ ||++.|+.++.
T Consensus 203 g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 203 GMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred eeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 89999999988888888899999999999988888777789999998 88887765554
No 219
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.28 E-value=4.5e-10 Score=119.20 Aligned_cols=307 Identities=13% Similarity=0.112 Sum_probs=185.0
Q ss_pred CCeEEEEeCCCeEEEEECCCCeeeEEecCCCCc-----------EEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHW-----------VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287 (573)
Q Consensus 219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~-----------V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~ 287 (573)
+..++.++.++.|.-+|..+++.+.+....... ...+++ ++..|+.++.|+.|..+|..+|+.+.+.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 456777778899999999999998877543210 112333 4568999999999999999999876543
Q ss_pred ccC-CcccEEEEEecccccCCCCCEEEEEeC------CCcEEEEECCCCeEEEEecCCCcc-------------------
Q psy2671 288 MRG-HKQWITALSWEPFHLNHQCRRFASSGK------DGAIRIWDVILSQCVRVLTSHTRS------------------- 341 (573)
Q Consensus 288 ~~~-h~~~v~~~~~~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~h~~~------------------- 341 (573)
..+ .......+...|.. .+..++.++. +|.|+.+|..+++.+..+......
T Consensus 155 ~~~~~~~~~~~~~~~p~v---~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV---FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE---ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred cCCcCcCcCcccccCcEE---ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence 221 10000000011111 1234444432 789999999999887655432110
Q ss_pred -------------EEEEEECC-CcEEEEEeCCC-------------------eEEEEeCCCCeeeEeccC--CcceeeEE
Q psy2671 342 -------------VTCIRWGG-SGLIYSASQDR-------------------TIKVWRASDGVMCRTLEG--HAHWVNTL 386 (573)
Q Consensus 342 -------------v~~~~~~~-~~~l~s~s~d~-------------------~i~vw~~~~~~~~~~~~~--~~~~v~~~ 386 (573)
...+.+.+ .+.++.++.++ +|..+|..+|+..-.++. |..+-...
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~ 311 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS 311 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc
Confidence 01344443 35777776654 477778777766543322 21110000
Q ss_pred EeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC---cEEEEEeCCCeEEEEcCCCCccceeeeccc----
Q psy2671 387 ALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG---EKLVSGSDDFTLFLWNPEKEKKSLARMTGH---- 459 (573)
Q Consensus 387 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h---- 459 (573)
. .. ... .....+| ..++.++.+|.++++|..+++.........
T Consensus 312 ~--~~-p~l---------------------------~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~ 361 (677)
T 1kb0_A 312 T--QP-MIL---------------------------ADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWA 361 (677)
T ss_dssp C--SC-CEE---------------------------EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE
T ss_pred C--CC-cEE---------------------------EecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcc
Confidence 0 00 000 0000134 578888999999999988765432211110
Q ss_pred ------cccE------------------------EEEEECCCCCEEEEeeC-----------------------------
Q psy2671 460 ------QQLI------------------------NCVEFSPDGRIIASASF----------------------------- 480 (573)
Q Consensus 460 ------~~~v------------------------~~v~~sp~g~~las~s~----------------------------- 480 (573)
...+ ..++|+|++.++.+...
T Consensus 362 ~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 441 (677)
T 1kb0_A 362 SGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWN 441 (677)
T ss_dssp EEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCC
T ss_pred cccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccc
Confidence 0001 14689999888877543
Q ss_pred --------------CCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcC-C
Q psy2671 481 --------------DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG-D 545 (573)
Q Consensus 481 --------------dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~-~ 545 (573)
.|.|..||+.+++.+..++.. ..++...++.++.+++.++.|+.+++||.++++.+..+.-.. .
T Consensus 442 ~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~ 520 (677)
T 1kb0_A 442 TAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGV 520 (677)
T ss_dssp CCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred cccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCc
Confidence 278999999999988776532 233444566778889999999999999999999887665322 2
Q ss_pred CEEEEEEccCCCEEEE
Q psy2671 546 EVYAVDWAPDGEKVAS 561 (573)
Q Consensus 546 ~v~~~~~s~d~~~l~s 561 (573)
...-+.|..+|+.++.
T Consensus 521 ~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 521 VAAPSTYMVDGRQYVS 536 (677)
T ss_dssp CSCCEEEEETTEEEEE
T ss_pred ccCCEEEEeCCEEEEE
Confidence 2234567788875543
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.23 E-value=4.1e-10 Score=120.58 Aligned_cols=102 Identities=13% Similarity=0.091 Sum_probs=64.8
Q ss_pred ECCCCCEEE-EeeC---CCcEEEEeCCCCeE--EEeecCCcceEEEEEECCCCCEEEEEeCCC---cEEEEeCCcccccc
Q psy2671 468 FSPDGRIIA-SASF---DKSIKLWDGRIGKF--ITTLRGHVQAVYMVAWSSDSRLLVSGSADS---TLKVWNMKTKKIEQ 538 (573)
Q Consensus 468 ~sp~g~~la-s~s~---dg~i~lwd~~~~~~--~~~~~~h~~~v~~v~~s~dg~~las~s~D~---~v~vwd~~~~~~~~ 538 (573)
++++|..|+ .+.. .+.|..+|+.++.. ...+..|...+. .|++++++|+....++ .|++|++.++.. +
T Consensus 287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~-~ 363 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRV-R 363 (693)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEE-E
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCee-E
Confidence 455555444 3333 36788899887643 234545555554 8999999887766544 689999876543 3
Q ss_pred ccc-CcCCCEEEEEEccCCCEEEEeeCC----CcEEEcc
Q psy2671 539 DLP-GHGDEVYAVDWAPDGEKVASGGKD----KVLRLWQ 572 (573)
Q Consensus 539 ~l~-~h~~~v~~~~~s~d~~~l~s~~~d----~~i~iw~ 572 (573)
.+. .+.+.+..+.++++++.|+....+ ++++.|+
T Consensus 364 ~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d 402 (693)
T 3iuj_A 364 EVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFE 402 (693)
T ss_dssp EECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred EeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEE
Confidence 332 234567788888888877655443 5676664
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.22 E-value=1.9e-08 Score=96.97 Aligned_cols=209 Identities=11% Similarity=0.068 Sum_probs=133.8
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccC---C-cceeeE
Q psy2671 310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEG---H-AHWVNT 385 (573)
Q Consensus 310 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~---~-~~~v~~ 385 (573)
..+.+...++.|..||...++... +. ....+.++++.+++.++.++.+ .|.+|+..++........ . ...++.
T Consensus 62 ~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~ 138 (326)
T 2ghs_A 62 TAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSND 138 (326)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEEE
T ss_pred EEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCC
Confidence 456666678899999988765432 22 2457899999888877777654 488999877764322111 0 112333
Q ss_pred EEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC------CCeEEEEcCCCCccceeeeccc
Q psy2671 386 LALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD------DFTLFLWNPEKEKKSLARMTGH 459 (573)
Q Consensus 386 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~------dg~i~lwd~~~~~~~~~~~~~h 459 (573)
++++ |+|.+.++... .+.|..++ ++ . ...+..+
T Consensus 139 i~~d-------------------------------------~~G~l~v~~~~~~~~~~~~~l~~~~--~g-~-~~~~~~~ 177 (326)
T 2ghs_A 139 GRMH-------------------------------------PSGALWIGTMGRKAETGAGSIYHVA--KG-K-VTKLFAD 177 (326)
T ss_dssp EEEC-------------------------------------TTSCEEEEEEETTCCTTCEEEEEEE--TT-E-EEEEEEE
T ss_pred EEEC-------------------------------------CCCCEEEEeCCCcCCCCceEEEEEe--CC-c-EEEeeCC
Confidence 3333 44555444332 24455555 22 1 2222223
Q ss_pred cccEEEEEECCCCCEEEEe-eCCCcEEEEeCC--CC-e-----EEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671 460 QQLINCVEFSPDGRIIASA-SFDKSIKLWDGR--IG-K-----FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530 (573)
Q Consensus 460 ~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~--~~-~-----~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd 530 (573)
....+.++|+|||+.|+.+ +.++.|.+||.. ++ + .+..+.........+++.++|.+.++...++.|..|+
T Consensus 178 ~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d 257 (326)
T 2ghs_A 178 ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD 257 (326)
T ss_dssp ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC
T ss_pred CcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEEC
Confidence 3456789999999876544 567899999975 55 3 2333333445567899999998887776778899999
Q ss_pred CCcccccccccCcCCCEEEEEEc-cCCCEEEEee
Q psy2671 531 MKTKKIEQDLPGHGDEVYAVDWA-PDGEKVASGG 563 (573)
Q Consensus 531 ~~~~~~~~~l~~h~~~v~~~~~s-~d~~~l~s~~ 563 (573)
. +++.+..+..+...+.+++|+ ++++.|..++
T Consensus 258 ~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 258 T-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp T-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred C-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 8 566666666666679999998 8888775443
No 222
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.22 E-value=1.3e-09 Score=105.98 Aligned_cols=267 Identities=13% Similarity=0.062 Sum_probs=159.9
Q ss_pred CcEEEEEEcCCCCeEEEEe--CCCeEEEEECCCCeeeE------EecCCCCcEEEEEEcCCCCeEEEEee-----CCeEE
Q psy2671 208 EAVISVKFSPNGRSLASGS--GDTTVRFWDVTTQTPLF------KCEGHKHWVLCIAWSPDSKQLVSGCK-----NGVIH 274 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las~s--~d~~i~iwd~~~~~~~~------~~~~h~~~V~~v~~s~dg~~l~sgs~-----dg~i~ 274 (573)
..+..++++|+|+.+++.. .++.++||.+.+++... ...+|...+.+++|+++|+.+++-.. ++.|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 5688999999999888864 23435666654554320 11235567999999999876555443 57899
Q ss_pred EEECCCCceeccc-c----cCCcccEEEEEecccccCCCCCEEEEEe---CCCcEEEEECCCCeEEEEecCCCccEE-EE
Q psy2671 275 AWDSSTGKQIGQP-M----RGHKQWITALSWEPFHLNHQCRRFASSG---KDGAIRIWDVILSQCVRVLTSHTRSVT-CI 345 (573)
Q Consensus 275 vwd~~~~~~~~~~-~----~~h~~~v~~~~~~~~~~~~~~~~l~s~~---~dg~v~iwd~~~~~~~~~~~~h~~~v~-~~ 345 (573)
+||+.+++.+... + ..+...+..+++.+. .+..+++.. .++.|.+||+.+++..+.+.+|..... ..
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~----~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLI----HNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETT----TTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecC----CCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 9999988743221 1 112234456665541 234456655 688999999988887777665432110 01
Q ss_pred EECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheee
Q psy2671 346 RWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA 424 (573)
Q Consensus 346 ~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (573)
.+..++ .+++.+.+++++.|.. .++.++++
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~--------------~~~gia~s----------------------------------- 203 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHL--------------GVNGIVLD----------------------------------- 203 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCC--------------CEEEEEEC-----------------------------------
T ss_pred ceeECCEEEEeccCCCceeceec--------------ccceeEec-----------------------------------
Confidence 111223 3445566676665531 12344444
Q ss_pred eCCCCcEEEEEeCCC-eEEEEcCC---CC----cccee--eeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE
Q psy2671 425 QCPEGEKLVSGSDDF-TLFLWNPE---KE----KKSLA--RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF 494 (573)
Q Consensus 425 ~~~~~~~l~sg~~dg-~i~lwd~~---~~----~~~~~--~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~ 494 (573)
|+++.|..+..++ .+..++.. .. ..... ...++......++++++|+++++...++.|.+||..+++.
T Consensus 204 --~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~ 281 (343)
T 2qe8_A 204 --AENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAY 281 (343)
T ss_dssp --TTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEE
T ss_pred --cCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCE
Confidence 4455555555444 44444321 00 00000 1112233455789999999999999999999999866764
Q ss_pred EEeecC-CcceEEEEEECCCCCEEEEEeCCCcEEEE
Q psy2671 495 ITTLRG-HVQAVYMVAWSSDSRLLVSGSADSTLKVW 529 (573)
Q Consensus 495 ~~~~~~-h~~~v~~v~~s~dg~~las~s~D~~v~vw 529 (573)
...... +......++|.++|+++++.+..+.+.+|
T Consensus 282 ~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 282 KLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp EEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred EEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 333322 24568899999999988887765544433
No 223
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.20 E-value=1.1e-08 Score=101.64 Aligned_cols=250 Identities=12% Similarity=0.095 Sum_probs=151.4
Q ss_pred CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCC--eEEEEECCCCcee
Q psy2671 207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG--VIHAWDSSTGKQI 284 (573)
Q Consensus 207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg--~i~vwd~~~~~~~ 284 (573)
-.....++|+|+|+.+++...++.|+.||..++............ . ++|+|+++.|+++..++ .|.+|+...+...
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~-~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGG-K-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBC-B-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCC-c-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 346789999999998788778899999999887655444433322 3 89999999999888866 7999987655431
Q ss_pred ccc--c-cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE----ecCCCccE--EEEEECC-CcEEE
Q psy2671 285 GQP--M-RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV----LTSHTRSV--TCIRWGG-SGLIY 354 (573)
Q Consensus 285 ~~~--~-~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~----~~~h~~~v--~~~~~~~-~~~l~ 354 (573)
... . ......+.++++.| +...|..+..++.|+.||...+..... ..++...- ..+++++ ++.++
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p-----~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDE-----TEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECT-----TSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred EEeeeccchhcCCcEEEEEeC-----CCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 111 0 11223445555544 223444467788999999887653332 22222222 2889987 46555
Q ss_pred EE-eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671 355 SA-SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV 433 (573)
Q Consensus 355 s~-s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 433 (573)
.+ ...+.|..|+.... ...+.++.. ...+ ... ...........-.+..++|.+++
T Consensus 283 v~d~~~~~I~~~~~~g~--~~~~~g~~~-------------------~~g~--~dg-~~~~~~~~~P~gia~d~dG~lyv 338 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGE--CEWFCGSAT-------------------QKTV--QDG-LREEALFAQPNGMTVDEDGNFYI 338 (409)
T ss_dssp EEETTTTEEEEECTTCC--EEEEEECTT-------------------CCSC--BCE-EGGGCBCSSEEEEEECTTCCEEE
T ss_pred EEeCCCCEEEEEecCCC--EEEEEeCCC-------------------CCCc--CCC-cccccEeCCCeEEEEeCCCCEEE
Confidence 44 56788998886533 212211110 0000 000 00000000011223457788777
Q ss_pred EEe-CCCeEEEEcCCCCccceeeeccc---------------cccEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy2671 434 SGS-DDFTLFLWNPEKEKKSLARMTGH---------------QQLINCVEFSPDGRIIASASFDKSIKLWDG 489 (573)
Q Consensus 434 sg~-~dg~i~lwd~~~~~~~~~~~~~h---------------~~~v~~v~~sp~g~~las~s~dg~i~lwd~ 489 (573)
+-. .++.|+.|++.++. +..+.++ -.....|+++|+|.++++-..++.|+.+++
T Consensus 339 ad~~~~~~I~~~~~~~G~--v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 339 VDGFKGYCLRKLDILDGY--VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EETTTTCEEEEEETTTTE--EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EeCCCCCEEEEEECCCCE--EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 877 88899999965443 2333332 234789999999988888888888887753
No 224
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.17 E-value=9.5e-09 Score=101.35 Aligned_cols=246 Identities=13% Similarity=0.087 Sum_probs=146.8
Q ss_pred EEEEcCCCCeEEEEe----------CCCeEEEEECCCCeeeEEecCC-------CCcEEEEEEcCCCCeEEEEee--CCe
Q psy2671 212 SVKFSPNGRSLASGS----------GDTTVRFWDVTTQTPLFKCEGH-------KHWVLCIAWSPDSKQLVSGCK--NGV 272 (573)
Q Consensus 212 ~~~fsp~g~~las~s----------~d~~i~iwd~~~~~~~~~~~~h-------~~~V~~v~~s~dg~~l~sgs~--dg~ 272 (573)
.++++|||++|+.+. .++.|.++|..+++.+..+.-. ...-..++|+|||++|+++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 689999999888775 4679999999998877665311 112346799999999998874 578
Q ss_pred EEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE----ecCCCccE-EEEEE
Q psy2671 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV----LTSHTRSV-TCIRW 347 (573)
Q Consensus 273 i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~----~~~h~~~v-~~~~~ 347 (573)
|.+.|+.+++.+.....+.. ....|. ..+.+++.+.||.+.+.+...++.... +.....++ ..+.+
T Consensus 202 VsVID~~t~kvv~~I~v~g~-----~~~~p~----g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~ 272 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDC-----YHIFPA----SPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAF 272 (426)
T ss_dssp EEEEETTTTEEEEEEECCSE-----EEEEEE----ETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEE
T ss_pred EEEEECCCCeEEEEEEcCCc-----eeeccC----CCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeee
Confidence 99999998876543221111 011111 124567777888888888755443321 11111111 12234
Q ss_pred CCCc-EEEEEeCCCeEEEEeCCCCeeeE--eccC---CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671 348 GGSG-LIYSASQDRTIKVWRASDGVMCR--TLEG---HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421 (573)
Q Consensus 348 ~~~~-~l~s~s~d~~i~vw~~~~~~~~~--~~~~---~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (573)
.+++ .++..+..+.+.+.|...+.... .+.- ....+. +.+. ...
T Consensus 273 ~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g---------------------~~p~---------g~~ 322 (426)
T 3c75_H 273 SLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADD---------------------WRPG---------GWQ 322 (426)
T ss_dssp CTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGT---------------------EEEC---------SSS
T ss_pred cCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccc---------------------cccC---------Cce
Confidence 4443 45555667888888875443210 0000 000000 0000 000
Q ss_pred eeeeCCCCcEEEEEeC----------CCeEEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEEee-CCCcEEEEeC
Q psy2671 422 YQAQCPEGEKLVSGSD----------DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASAS-FDKSIKLWDG 489 (573)
Q Consensus 422 ~~~~~~~~~~l~sg~~----------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las~s-~dg~i~lwd~ 489 (573)
....+|++.++..... +++|.++|+.+.+. +.++.- ......++|+|||+ +++++. .++.|.++|.
T Consensus 323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv-v~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER-INKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE-EEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE-EEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence 0122355555544431 35799999887654 333321 12367899999999 888887 5999999999
Q ss_pred CCCeEEEee
Q psy2671 490 RIGKFITTL 498 (573)
Q Consensus 490 ~~~~~~~~~ 498 (573)
.+++.+.++
T Consensus 401 ~t~kvv~tI 409 (426)
T 3c75_H 401 ATGEELRSV 409 (426)
T ss_dssp TTCCEEEEE
T ss_pred CCCCEEEEe
Confidence 999988886
No 225
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.15 E-value=1.9e-06 Score=93.86 Aligned_cols=347 Identities=10% Similarity=0.091 Sum_probs=201.1
Q ss_pred EEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCC-CCc-EEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671 210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGH-KHW-VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287 (573)
Q Consensus 210 V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h-~~~-V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~ 287 (573)
|.++...++|...+. +. +.+..||..+++......++ ... |.++...+++. |..|+.++-+..|+..+++.....
T Consensus 133 i~~i~~d~~g~lwi~-t~-~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~ 209 (795)
T 4a2l_A 133 VNGIEEISPEQLLIS-TP-EGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQ-IYIGTSTDGLYTYSITQKTFEKVI 209 (795)
T ss_dssp CCEEEEEETTEEEEE-ET-TEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTE-EEEEESSSCEEEEETTTCCEEECC
T ss_pred EEEEEECCCCCEEEE-EC-CceEEEECCCCEEEeccCCCCCCcceEEEEECCCCC-EEEEECCCCEEEEeCCCCeEEEec
Confidence 777888888875554 44 45888998765432111111 112 88888888876 445666555888998776543211
Q ss_pred ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC-------CCccEEEEEECCCcEEEEEeCCC
Q psy2671 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS-------HTRSVTCIRWGGSGLIYSASQDR 360 (573)
Q Consensus 288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-------h~~~v~~~~~~~~~~l~s~s~d~ 360 (573)
.......|.++...+ ++ .+..++.++-+..||..+++....... ....|.++....++.++.|+.+
T Consensus 210 ~~~~~~~i~~i~~d~-----~g-~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~- 282 (795)
T 4a2l_A 210 PILGTKQIQAILQQS-----PT-RIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN- 282 (795)
T ss_dssp ----CCCEEEEEEEE-----TT-EEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-
T ss_pred CCCCCCeeEEEEEcC-----CC-CEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-
Confidence 112234566665432 33 344455554588899877655443221 2356999999888989988877
Q ss_pred eEEEEeCCCCeeeEeccC-------CcceeeEEEeccCceeEEEEcCCCceeeCCCCchh------hhhhhh--hhee--
Q psy2671 361 TIKVWRASDGVMCRTLEG-------HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE------SSKHAL--AKYQ-- 423 (573)
Q Consensus 361 ~i~vw~~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~~-- 423 (573)
-|.+|+..++........ ....|.++....+..+=+.....+-..+++....- .....+ ....
T Consensus 283 Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i 362 (795)
T 4a2l_A 283 DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCI 362 (795)
T ss_dssp CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEE
T ss_pred hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEE
Confidence 588899877755432211 22457777766665444443333333332211000 000000 0011
Q ss_pred eeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec-------cccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE
Q psy2671 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT-------GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496 (573)
Q Consensus 424 ~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~-------~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~ 496 (573)
...++| .|-.|+.++-+..|+..+......... -....|.++...++|++|..|+.++-+..||..+++...
T Consensus 363 ~~d~~g-~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~ 441 (795)
T 4a2l_A 363 VEDKDK-NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVEN 441 (795)
T ss_dssp EECTTS-CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEE
T ss_pred EECCCC-CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEE
Confidence 112333 456677777788898765432111100 113568999999999856677887789999988876433
Q ss_pred eec----CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccccc------CcCCCEEEEEEccCCCEEEEeeCCC
Q psy2671 497 TLR----GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP------GHGDEVYAVDWAPDGEKVASGGKDK 566 (573)
Q Consensus 497 ~~~----~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~------~h~~~v~~~~~s~d~~~l~s~~~d~ 566 (573)
-.. .+...|.++...++|.+.+.. . +.+..||..+++...... -....|.++...++|+..+... .|
T Consensus 442 ~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~G 518 (795)
T 4a2l_A 442 FNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EG 518 (795)
T ss_dssp ECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SC
T ss_pred eecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-Cc
Confidence 221 123578999999888866544 3 458899987765432211 1235789999888887655443 44
Q ss_pred cEEEc
Q psy2671 567 VLRLW 571 (573)
Q Consensus 567 ~i~iw 571 (573)
|..|
T Consensus 519 -l~~~ 522 (795)
T 4a2l_A 519 -LSVF 522 (795)
T ss_dssp -EEEE
T ss_pred -eEEE
Confidence 4444
No 226
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.13 E-value=5e-08 Score=94.04 Aligned_cols=223 Identities=13% Similarity=0.101 Sum_probs=138.0
Q ss_pred EEEEEEcCCCC-eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe
Q psy2671 252 VLCIAWSPDSK-QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ 330 (573)
Q Consensus 252 V~~v~~s~dg~-~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 330 (573)
..+.+|+|++. .+++...++.|..||..+++..... ....+.++.|.| +++.+++ +.+ .|.+||..+++
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~---~~~~v~~i~~~~-----dg~l~v~-~~~-gl~~~d~~~g~ 120 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA---LPFMGSALAKIS-----DSKQLIA-SDD-GLFLRDTATGV 120 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE---CSSCEEEEEEEE-----TTEEEEE-ETT-EEEEEETTTCC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE---CCCcceEEEEeC-----CCeEEEE-ECC-CEEEEECCCCc
Confidence 46778999755 4556667889999999877542111 234678887765 4555554 444 49999987776
Q ss_pred EEEEecC----CCccEEEEEECCCcEEEEEeCC-----CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCC
Q psy2671 331 CVRVLTS----HTRSVTCIRWGGSGLIYSASQD-----RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATST 401 (573)
Q Consensus 331 ~~~~~~~----h~~~v~~~~~~~~~~l~s~s~d-----~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~ 401 (573)
....... ....+..+++.+++.++.++.+ ....+|.+.++.... +..+....+.++
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~-~~~~~~~~~~i~-------------- 185 (326)
T 2ghs_A 121 LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTK-LFADISIPNSIC-------------- 185 (326)
T ss_dssp EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEE-EEEEESSEEEEE--------------
T ss_pred EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEEE-eeCCCcccCCeE--------------
Confidence 5433221 1246888999988866665532 223344332333221 111111112222
Q ss_pred CceeeCCCCchhhhhhhhhheeeeCCCCcEE-EEEeCCCeEEEEcCC--CC-c----cceeeeccccccEEEEEECCCCC
Q psy2671 402 GGFKYDPANPEESSKHALAKYQAQCPEGEKL-VSGSDDFTLFLWNPE--KE-K----KSLARMTGHQQLINCVEFSPDGR 473 (573)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~sg~~dg~i~lwd~~--~~-~----~~~~~~~~h~~~v~~v~~sp~g~ 473 (573)
.+|+++.+ ++.+.++.|.+|++. ++ . ..+..+.........++++++|+
T Consensus 186 -----------------------~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~ 242 (326)
T 2ghs_A 186 -----------------------FSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH 242 (326)
T ss_dssp -----------------------ECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC
T ss_pred -----------------------EcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC
Confidence 23567655 444567889999875 33 1 11222222334567899999999
Q ss_pred EEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEEC-CCCCEEEEEeCC
Q psy2671 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS-SDSRLLVSGSAD 523 (573)
Q Consensus 474 ~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s-~dg~~las~s~D 523 (573)
+.++...++.|..||. .++.+..+..+...+++++|+ ++++.|+.++..
T Consensus 243 lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 243 IWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred EEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 8887777789999998 577777777666679999998 888877555443
No 227
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.13 E-value=1.8e-09 Score=104.43 Aligned_cols=294 Identities=12% Similarity=0.072 Sum_probs=178.1
Q ss_pred EcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCccc
Q psy2671 215 FSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQW 294 (573)
Q Consensus 215 fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~ 294 (573)
+..+| .+..++.++.|..|| .+++.+.....+...+.++...++|. |..++.+ +..+|. +++.+... ......
T Consensus 27 ~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~-~~~~~~ 99 (330)
T 3hxj_A 27 LAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRF-DTKKAI 99 (330)
T ss_dssp ECTTS-CEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGS-CC----
T ss_pred EccCC-eEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEE-ECCCCc
Confidence 44455 466677788899999 88877666554445567777777775 5555555 888886 55543221 111111
Q ss_pred EEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeE
Q psy2671 295 ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCR 374 (573)
Q Consensus 295 v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~ 374 (573)
...... ....+..++.++.+..+|.. ++.......+...+.++...+++.++.++.++.|..++.. +....
T Consensus 100 ~~~~~~-------~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~ 170 (330)
T 3hxj_A 100 VSDFTI-------FEDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKW 170 (330)
T ss_dssp -CCEEE-------ETTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEE
T ss_pred ccCceE-------ECCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeE
Confidence 111111 13457777888999999988 6665555555555566666777889999999999999987 65543
Q ss_pred eccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcccee
Q psy2671 375 TLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454 (573)
Q Consensus 375 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~ 454 (573)
........+..+. ..+++. +..++ +.+..+| .++.. ..
T Consensus 171 ~~~~~~~~~~~~~-------------------------------------~d~~g~-l~v~t--~~l~~~d-~~g~~-~~ 208 (330)
T 3hxj_A 171 RFKTNDAITSAAS-------------------------------------IGKDGT-IYFGS--DKVYAIN-PDGTE-KW 208 (330)
T ss_dssp EEECSSCCCSCCE-------------------------------------ECTTCC-EEEES--SSEEEEC-TTSCE-EE
T ss_pred EEecCCCceeeeE-------------------------------------EcCCCE-EEEEe--CEEEEEC-CCCcE-EE
Confidence 3322111111111 112344 34444 7788888 44332 22
Q ss_pred eeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671 455 RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534 (573)
Q Consensus 455 ~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~ 534 (573)
........+.++.++++|.+.+ ++.++.+..+|. +++.+..+......+..+.+.+++ .|..++.++.|..+|. ++
T Consensus 209 ~~~~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g 284 (330)
T 3hxj_A 209 NFYAGYWTVTRPAISEDGTIYV-TSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DG 284 (330)
T ss_dssp EECCSSCCCSCCEECTTSCEEE-EETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TS
T ss_pred EEccCCcceeceEECCCCeEEE-EcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CC
Confidence 3333335577888888886554 666788888884 555555554333333445555566 4556778888999996 56
Q ss_pred cccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671 535 KIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571 (573)
Q Consensus 535 ~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw 571 (573)
+....+......+.++...++++ |..++.+|.+++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 285 TEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYAL 320 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEE
T ss_pred cEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEE
Confidence 55444433344566677767775 5668889988764
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.12 E-value=1.7e-08 Score=107.35 Aligned_cols=286 Identities=15% Similarity=0.198 Sum_probs=155.1
Q ss_pred CCeEEEEeCCCeEEEEECCCCeeeEEecCC--CCcEEEEEEcC---CCCeEEEEe------eCCeEEEEECCCCceeccc
Q psy2671 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGH--KHWVLCIAWSP---DSKQLVSGC------KNGVIHAWDSSTGKQIGQP 287 (573)
Q Consensus 219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h--~~~V~~v~~s~---dg~~l~sgs------~dg~i~vwd~~~~~~~~~~ 287 (573)
+..++.++.|+.|..+|..+++.+...... ......+..+| ++ .++.++ .+|.|..||..+|+.+...
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 457888889999999999999988776542 11111111122 44 455544 3789999999999876432
Q ss_pred cc--CCccc-----------------------EEEEEecccccCCCCCEEEEEeCCC-------------------cEEE
Q psy2671 288 MR--GHKQW-----------------------ITALSWEPFHLNHQCRRFASSGKDG-------------------AIRI 323 (573)
Q Consensus 288 ~~--~h~~~-----------------------v~~~~~~~~~~~~~~~~l~s~~~dg-------------------~v~i 323 (573)
.. +.... -....|.+..+++..+++..+..++ .|..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 11 00000 0011121222223445666666665 3999
Q ss_pred EECCCCeEEEEecC--CC-------ccEE--EEEECCC--cEEEEEeCCCeEEEEeCCCCeeeEeccCC-cceeeEEEec
Q psy2671 324 WDVILSQCVRVLTS--HT-------RSVT--CIRWGGS--GLIYSASQDRTIKVWRASDGVMCRTLEGH-AHWVNTLALS 389 (573)
Q Consensus 324 wd~~~~~~~~~~~~--h~-------~~v~--~~~~~~~--~~l~s~s~d~~i~vw~~~~~~~~~~~~~~-~~~v~~~~~s 389 (573)
+|..+++.+..+.. |. .... .+.+.+. ..++.++.+|.+.++|..+|+.+....-. ..|...+...
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~ 359 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK 359 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence 99999988776543 32 1111 2222221 25888999999999999999876433211 1121111100
Q ss_pred cCce---------------eEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe------------------
Q psy2671 390 TDYL---------------MRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS------------------ 436 (573)
Q Consensus 390 ~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~------------------ 436 (573)
.... ..+.....+...|.. .+..|...++.+..
T Consensus 360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~--------------~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~ 425 (689)
T 1yiq_A 360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQP--------------MSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNP 425 (689)
T ss_dssp TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSC--------------CEEETTTTEEEEEEEECCEEEECCSSCCCCCS
T ss_pred CCCcccchhhccccCCCCeeEeCCCcccccCCCc--------------ceECCCCCEEEEeccccceeeeeccccccccc
Confidence 0000 000000000000000 01112222222111
Q ss_pred ---------------------------CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy2671 437 ---------------------------DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDG 489 (573)
Q Consensus 437 ---------------------------~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~ 489 (573)
.+|.++.||+.+++..-.. ..+ ..+..-.++..+.+++.|+.||.++.||.
T Consensus 426 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~-~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~ 503 (689)
T 1yiq_A 426 FKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEV-PYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAA 503 (689)
T ss_dssp CTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEE-EES-SSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred cccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEc-cCC-CCccCccceECCCEEEEECCCCcEEEEEC
Confidence 2478999999887643332 222 22233355567789999999999999999
Q ss_pred CCCeEEEeecCCcce-EEEEEECCCCC-EEEEEe
Q psy2671 490 RIGKFITTLRGHVQA-VYMVAWSSDSR-LLVSGS 521 (573)
Q Consensus 490 ~~~~~~~~~~~h~~~-v~~v~~s~dg~-~las~s 521 (573)
++|+.+..++..... ..-+.|+.||+ ++++.+
T Consensus 504 ~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 504 DTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp TTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CCCccceeeeCCCCcccCceEEEECCEEEEEEEe
Confidence 999999887644221 12356677887 444443
No 229
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.11 E-value=5.2e-06 Score=90.38 Aligned_cols=310 Identities=9% Similarity=0.091 Sum_probs=189.0
Q ss_pred CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecC-------CCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC
Q psy2671 207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-------HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279 (573)
Q Consensus 207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~-------h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~ 279 (573)
...|.++...++|.+.+ |+.++-+.+||..+++....... ....|.++...++|. |..|+.+| |.+|+..
T Consensus 214 ~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~G-l~~~~~~ 290 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNR-LWIGTFND-LNIYHEG 290 (795)
T ss_dssp CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSC-EEEEESSC-EEEEETT
T ss_pred CCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCC-EEEEeCCh-hheEcCC
Confidence 34688888888876544 44444588899877654322211 235699999998887 44555554 7889987
Q ss_pred CCceeccc------ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec------CCCccEEEEEE
Q psy2671 280 TGKQIGQP------MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT------SHTRSVTCIRW 347 (573)
Q Consensus 280 ~~~~~~~~------~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~------~h~~~v~~~~~ 347 (573)
++...... ..-....|.++...+ ++ .+-.|+.++-|..|+........... .....|.++..
T Consensus 291 ~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-----~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~ 364 (795)
T 4a2l_A 291 TDSFASYSSNPVENGSLSQRSVRSIFMDS-----QG-GMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVE 364 (795)
T ss_dssp TTEEEEECCCTTSTTSCSSSCEEEEEECT-----TS-CEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEE
T ss_pred CCeEEEEecCCCCCCCCCCCcEEEEEEeC-----Cc-CEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEE
Confidence 66432111 011234577776543 33 35567777778888865543222111 12356899999
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCeeeEeccCC--------cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671 348 GGSGLIYSASQDRTIKVWRASDGVMCRTLEGH--------AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL 419 (573)
Q Consensus 348 ~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~--------~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (573)
..++.++.|+.++-|..|+..++......... ...|.+++.
T Consensus 365 d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~------------------------------- 413 (795)
T 4a2l_A 365 DKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYV------------------------------- 413 (795)
T ss_dssp CTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEE-------------------------------
T ss_pred CCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEE-------------------------------
Confidence 88899999999988999998766443221110 111222221
Q ss_pred hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec-----cccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE
Q psy2671 420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT-----GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF 494 (573)
Q Consensus 420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~-----~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~ 494 (573)
.+++..|..|+.++-+..||..++.. ..+. .....|.++...++|.+.+.. .+ .+..||..+++.
T Consensus 414 ------d~~g~~lWigt~~~Gl~~~d~~~~~~--~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 414 ------DEKKSLVYIGTHAGGLSILHRNSGQV--ENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSF 483 (795)
T ss_dssp ------ETTTTEEEEEETTTEEEEEETTTCCE--EEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEE
T ss_pred ------cCCCCEEEEEeCcCceeEEeCCCCcE--EEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeE
Confidence 13355366777777788888765432 1111 123569999999998876654 44 588899888764
Q ss_pred EEeecC------CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccc------cCcCCCEEEEEEccCCCEEEEe
Q psy2671 495 ITTLRG------HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL------PGHGDEVYAVDWAPDGEKVASG 562 (573)
Q Consensus 495 ~~~~~~------h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l------~~h~~~v~~~~~s~d~~~l~s~ 562 (573)
...... +...|.++...++|++.+... +.+..|+..+++. ... ......|.++...++|+..++.
T Consensus 484 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT 560 (795)
T 4a2l_A 484 TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGT 560 (795)
T ss_dssp EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEE
T ss_pred EEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEe
Confidence 332211 235689999999998766443 5688898876554 100 1134579999988888755543
Q ss_pred eCCCcEEEc
Q psy2671 563 GKDKVLRLW 571 (573)
Q Consensus 563 ~~d~~i~iw 571 (573)
. .| |..|
T Consensus 561 ~-~G-l~~~ 567 (795)
T 4a2l_A 561 R-EG-FYCF 567 (795)
T ss_dssp S-SC-EEEE
T ss_pred C-CC-ceeE
Confidence 3 34 4444
No 230
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.07 E-value=2.8e-08 Score=94.80 Aligned_cols=233 Identities=12% Similarity=0.100 Sum_probs=138.0
Q ss_pred EEecCCCCcEEEEEEcCCCC-eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcE
Q psy2671 243 FKCEGHKHWVLCIAWSPDSK-QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321 (573)
Q Consensus 243 ~~~~~h~~~V~~v~~s~dg~-~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v 321 (573)
..+..........+|+|+|+ .++++..++.|..|+.. +.. ..+..+...+.++.+.+ +++.+++...++.|
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~--~~~~~~~~~~~gl~~d~-----dG~l~v~~~~~~~v 109 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV--DVLLDATAFTNGNAVDA-----QQRLVHCEHGRRAI 109 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE--EEEEESCSCEEEEEECT-----TSCEEEEETTTTEE
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE--EEEeCCCCccceeeECC-----CCCEEEEECCCCEE
Confidence 33444455678899999998 55677778999999984 432 12233445567777654 56666655556789
Q ss_pred EEEECCCCeEEEEecCC----CccEEEEEECCCcEEEE-----EeC-------------CCeEEEEeCCCCeeeEeccCC
Q psy2671 322 RIWDVILSQCVRVLTSH----TRSVTCIRWGGSGLIYS-----ASQ-------------DRTIKVWRASDGVMCRTLEGH 379 (573)
Q Consensus 322 ~iwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~l~s-----~s~-------------d~~i~vw~~~~~~~~~~~~~~ 379 (573)
..|+.. ++........ ...+..+++.++|.++. |.. .+.|..++..++...... .
T Consensus 110 ~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~ 186 (305)
T 3dr2_A 110 TRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--D 186 (305)
T ss_dssp EEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--E
T ss_pred EEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--c
Confidence 999875 4432221111 12356788888886665 322 234555555444332211 1
Q ss_pred cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC------CeEEEEcCCCCccce
Q psy2671 380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD------FTLFLWNPEKEKKSL 453 (573)
Q Consensus 380 ~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d------g~i~lwd~~~~~~~~ 453 (573)
....+.++ .+|+++.|..+... +.|+.|++......-
T Consensus 187 ~~~p~gl~-------------------------------------~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~ 229 (305)
T 3dr2_A 187 LDHPNGLA-------------------------------------FSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHD 229 (305)
T ss_dssp ESSEEEEE-------------------------------------ECTTSSEEEEEECCC---CCCEEEEEEEETTEEEE
T ss_pred CCCCcceE-------------------------------------EcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccC
Confidence 11122223 34666666555544 678888875432100
Q ss_pred -eee-ccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEE
Q psy2671 454 -ARM-TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527 (573)
Q Consensus 454 -~~~-~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~ 527 (573)
..+ .........++++++|++.++. .+ .|.+||. .++.+..+..+. .+..++|+++++.|..++.++..+
T Consensus 230 ~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 230 RRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp EEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred CeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 011 1112234568999999955544 44 4999998 566777666554 578899999999888887764433
No 231
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.06 E-value=4.5e-08 Score=93.40 Aligned_cols=226 Identities=16% Similarity=0.156 Sum_probs=138.6
Q ss_pred ccEEEEEecccccCCCCC-EEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeC-CCeEEEEeCCCC
Q psy2671 293 QWITALSWEPFHLNHQCR-RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ-DRTIKVWRASDG 370 (573)
Q Consensus 293 ~~v~~~~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~-d~~i~vw~~~~~ 370 (573)
.+..+..|.| +++ .+.+...++.|..|+. .++ ...+..+...+..+++.+++.++.+.. ++.|..|+.. +
T Consensus 45 ~~~egp~~~~-----~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 45 TWSEGPAWWE-----AQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp SSEEEEEEEG-----GGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cCccCCeEeC-----CCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence 3455666665 344 5667777889999998 443 344445566788999999887777765 4789999875 4
Q ss_pred eeeEecc---CC-cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE----EeC-----
Q psy2671 371 VMCRTLE---GH-AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS----GSD----- 437 (573)
Q Consensus 371 ~~~~~~~---~~-~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s----g~~----- 437 (573)
....... +. ...++.+++. ++|.+.++ |..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d-------------------------------------~dG~l~~td~~~g~~~~~~~ 159 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVA-------------------------------------RDGAIWFTDPPFGLRKPSQG 159 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEEC-------------------------------------TTSCEEEECCSGGGSCGGGS
T ss_pred CEEEEEeccCCCccCCCCCEEEC-------------------------------------CCCCEEEeCcCCCccccccc
Confidence 4321111 00 0111222222 44554443 221
Q ss_pred --------CCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC------CcEEEEeCCCCeEE--Eee-cC
Q psy2671 438 --------DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD------KSIKLWDGRIGKFI--TTL-RG 500 (573)
Q Consensus 438 --------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d------g~i~lwd~~~~~~~--~~~-~~ 500 (573)
.+.|..||..++.... +. .....+.++|+||++.|+.+... +.|..||...+... ..+ ..
T Consensus 160 ~~~~~~~~~~~v~~~d~~~g~~~~--~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~ 236 (305)
T 3dr2_A 160 CPADPELAHHSVYRLPPDGSPLQR--MA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV 236 (305)
T ss_dssp CCCCCSSSCEEEEEECSSSCCCEE--EE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC
T ss_pred cccccccCCCeEEEEcCCCCcEEE--Ee-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC
Confidence 2467777765443221 22 33456889999999987777655 78999997654310 111 11
Q ss_pred CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEE
Q psy2671 501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL 570 (573)
Q Consensus 501 h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~i 570 (573)
.......+++.++|++.++ +.+ .|.+|+.. ++.+..+..+. .+..++|+++++.|..++.++..++
T Consensus 237 ~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~~-g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 237 PDGLPDGFCVDRGGWLWSS-SGT-GVCVFDSD-GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp SSSCCCSEEECTTSCEEEC-CSS-EEEEECTT-SCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred CCCCCCeEEECCCCCEEEe-cCC-cEEEECCC-CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 1223346789999995544 444 49999984 55555554443 5788999999999988887765554
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.03 E-value=3.9e-10 Score=110.75 Aligned_cols=110 Identities=10% Similarity=0.047 Sum_probs=58.6
Q ss_pred CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCc-ccEE
Q psy2671 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHK-QWIT 296 (573)
Q Consensus 218 ~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~-~~v~ 296 (573)
++..+++++.|+.|..||..+++.+..... ..+.+..+.+++..+++++.||.|+.||..+|+.+... ..+. ..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~-~~~~~~~~- 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL-PFTIPELV- 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEEC-SCCHHHHH-
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeee-eccCcccc-
Confidence 567899999999999999999999888776 45556666678878888899999999999888754321 1111 000
Q ss_pred EEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe
Q psy2671 297 ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335 (573)
Q Consensus 297 ~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 335 (573)
...|.. ..+..+++++.++.++.||..+++....+
T Consensus 84 --~~sp~~--~~~~~v~~g~~dg~v~a~D~~tG~~~w~~ 118 (369)
T 2hz6_A 84 --QASPCR--SSDGILYMGKKQDIWYVIDLLTGEKQQTL 118 (369)
T ss_dssp --TTCSCC-------CCCCEEEEEEEEECCC--------
T ss_pred --ccCceE--ecCCEEEEEeCCCEEEEEECCCCcEEEEe
Confidence 001110 01234455556666666666666554433
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.01 E-value=2.7e-08 Score=105.49 Aligned_cols=301 Identities=14% Similarity=0.091 Sum_probs=169.8
Q ss_pred CCeEEEEeeCCeEEEEECCCCceecccccCCcccEE---EEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC
Q psy2671 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWIT---ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS 337 (573)
Q Consensus 261 g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~---~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 337 (573)
+..|+.++.++.|..+|..+|+.+.+.......... +...........+.++..++.|+.+..+|..+++.+..+..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 156 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNT 156 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEET
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeecC
Confidence 456777888889999999999876542211100000 00000000001245777888999999999999988877654
Q ss_pred C-C----ccEEE-EEECCCcEEEEEeC------CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCcee
Q psy2671 338 H-T----RSVTC-IRWGGSGLIYSASQ------DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK 405 (573)
Q Consensus 338 h-~----~~v~~-~~~~~~~~l~s~s~------d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~ 405 (573)
+ . ..+.+ ... .++.++.++. ++.|..+|..+|+.+-.+.............+. ...+...
T Consensus 157 ~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~-------~~~g~~~ 228 (677)
T 1kb0_A 157 FEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDES-------MKRAART 228 (677)
T ss_dssp TTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHH-------HHHHHTT
T ss_pred CcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccc-------ccccccc
Confidence 4 1 11111 111 2456666553 789999999999876444321110000000000 0000000
Q ss_pred eCCCCchhhhhh--h--hhheeeeCCCCcEEEEEeCCC-------------------eEEEEcCCCCccceeeecc-cc-
Q psy2671 406 YDPANPEESSKH--A--LAKYQAQCPEGEKLVSGSDDF-------------------TLFLWNPEKEKKSLARMTG-HQ- 460 (573)
Q Consensus 406 ~~~~~~~~~~~~--~--~~~~~~~~~~~~~l~sg~~dg-------------------~i~lwd~~~~~~~~~~~~~-h~- 460 (573)
|.+. ...-.. . .-......+.+..+..+..++ .|..+|..+++..-..... |.
T Consensus 229 w~~~--g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~ 306 (677)
T 1kb0_A 229 WDPS--GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDN 306 (677)
T ss_dssp SCGG--GCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC
T ss_pred cccc--CceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcc
Confidence 0000 000000 0 000012234555666665543 5888888877654333222 21
Q ss_pred ------ccEEEEEECCCC---CEEEEeeCCCcEEEEeCCCCeEEEeecCCc-----------ceE---------------
Q psy2671 461 ------QLINCVEFSPDG---RIIASASFDKSIKLWDGRIGKFITTLRGHV-----------QAV--------------- 505 (573)
Q Consensus 461 ------~~v~~v~~sp~g---~~las~s~dg~i~lwd~~~~~~~~~~~~h~-----------~~v--------------- 505 (573)
.....+....+| ..++.++.+|.++++|..+|+.+..++... ..+
T Consensus 307 wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~ 386 (677)
T 1kb0_A 307 WDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAV 386 (677)
T ss_dssp SCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECS
T ss_pred cccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEEC
Confidence 112223444577 689999999999999999999876654210 111
Q ss_pred ---------EEEEECCCCCEEEEEeCC-------------------------------------------CcEEEEeCCc
Q psy2671 506 ---------YMVAWSSDSRLLVSGSAD-------------------------------------------STLKVWNMKT 533 (573)
Q Consensus 506 ---------~~v~~s~dg~~las~s~D-------------------------------------------~~v~vwd~~~ 533 (573)
..++++|++.++++...+ +.|..||+.+
T Consensus 387 P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t 466 (677)
T 1kb0_A 387 PGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA 466 (677)
T ss_dssp SCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT
T ss_pred cCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC
Confidence 146889998888776432 7899999999
Q ss_pred ccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 534 ~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
++.+-..+ +..++.+..++.++..++.++.|+.++.|+
T Consensus 467 G~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 467 QKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYH 504 (677)
T ss_dssp TEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred CcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEE
Confidence 98876654 334455556777888899999999999886
No 234
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.01 E-value=1.4e-10 Score=114.04 Aligned_cols=187 Identities=13% Similarity=0.011 Sum_probs=106.4
Q ss_pred CCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeeccccc
Q psy2671 121 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT 200 (573)
Q Consensus 121 ~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (573)
++..+++++.|+.|+.||..+|+.+++...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-------------------------------------------------- 37 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-------------------------------------------------- 37 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--------------------------------------------------
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--------------------------------------------------
Confidence 578899999999999999999987654221
Q ss_pred cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCc-EEE-EEEcCCCCeEEEEeeCCeEEEEEC
Q psy2671 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHW-VLC-IAWSPDSKQLVSGCKNGVIHAWDS 278 (573)
Q Consensus 201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~-V~~-v~~s~dg~~l~sgs~dg~i~vwd~ 278 (573)
+.+.+..+.+++..+++++.|+.|..||..+++.+.....+... +.+ ..+. ++..|++|+.++.+..||.
T Consensus 38 -------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~ 109 (369)
T 2hz6_A 38 -------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDL 109 (369)
T ss_dssp -------CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECC
T ss_pred -------CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEEC
Confidence 11122224456777888889999999999988877665543211 100 0111 3457888999999999999
Q ss_pred CCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC----cEEE
Q psy2671 279 STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS----GLIY 354 (573)
Q Consensus 279 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~----~~l~ 354 (573)
.+|+.+... ..+. ...+.| .+..+++++.|+.|+.||..+++....+..+. .....+.++ +.++
T Consensus 110 ~tG~~~w~~-~~~~----~~~~~p-----~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~ 177 (369)
T 2hz6_A 110 LTGEKQQTL-SSAF----ADSLSP-----STSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHF 177 (369)
T ss_dssp C--------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEE
T ss_pred CCCcEEEEe-cCCC----cccccc-----cCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEE
Confidence 999876432 2221 112222 45678888999999999998887654433211 112223332 5788
Q ss_pred EEeCCCeEEEEeCCCCeeeEecc
Q psy2671 355 SASQDRTIKVWRASDGVMCRTLE 377 (573)
Q Consensus 355 s~s~d~~i~vw~~~~~~~~~~~~ 377 (573)
.++.|+.+..||..+|+..-...
T Consensus 178 ~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 178 VSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp EEETSCEEEEECTTTCCEEEEEE
T ss_pred EECCCCEEEEEECCCCcEEEEec
Confidence 89999999999999988765544
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.01 E-value=1.4e-08 Score=98.09 Aligned_cols=264 Identities=13% Similarity=0.079 Sum_probs=151.2
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccc
Q psy2671 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288 (573)
Q Consensus 209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~ 288 (573)
.+.++.+.++|. +..++.+ +..+|. +++.+..............+. +..|..++.++.+..+|.. ++......
T Consensus 61 ~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~ 133 (330)
T 3hxj_A 61 IECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFK 133 (330)
T ss_dssp EEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEE
T ss_pred cccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEc
Confidence 345566666665 4444444 888885 555443333222222223333 4568888889999999988 65543211
Q ss_pred cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCC
Q psy2671 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRAS 368 (573)
Q Consensus 289 ~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~ 368 (573)
.....+.++. ...++ .+..++.++.+..+|.. ++...........+.++....++.++.++ +.|..++ .
T Consensus 134 -~~~~~~~~~~-----~~~~g-~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~ 202 (330)
T 3hxj_A 134 -TKKAIYATPI-----VSEDG-TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-P 202 (330)
T ss_dssp -CSSCCCSCCE-----ECTTS-CEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-T
T ss_pred -CCCceeeeeE-----EcCCC-EEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-C
Confidence 1111111111 11233 46667788999999988 76665555555556667776777788887 7888888 5
Q ss_pred CCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCC
Q psy2671 369 DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEK 448 (573)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~ 448 (573)
++............+.++.. .+++ .+..++.++.+..++...
T Consensus 203 ~g~~~~~~~~~~~~~~~~~~-------------------------------------~~~g-~l~v~t~~~gl~~~~~~g 244 (330)
T 3hxj_A 203 DGTEKWNFYAGYWTVTRPAI-------------------------------------SEDG-TIYVTSLDGHLYAINPDG 244 (330)
T ss_dssp TSCEEEEECCSSCCCSCCEE-------------------------------------CTTS-CEEEEETTTEEEEECTTS
T ss_pred CCcEEEEEccCCcceeceEE-------------------------------------CCCC-eEEEEcCCCeEEEECCCC
Confidence 66544333221111111111 1233 456677777788887532
Q ss_pred CccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEE
Q psy2671 449 EKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKV 528 (573)
Q Consensus 449 ~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~v 528 (573)
.. +.........+.++.+.+++. |..++.+|.+..+|. +++.+..+......+.++...++|++ ..++.+|.+++
T Consensus 245 -~~-~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l-~~gt~~G~~~~ 319 (330)
T 3hxj_A 245 -TE-KWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTI-YFGTRNGKFYA 319 (330)
T ss_dssp -CE-EEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCE-EEECTTSCEEE
T ss_pred -CE-eEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEE-EEEcCCCeEEE
Confidence 22 222222233344456666665 556777888999996 67766665544445667777777765 45888999998
Q ss_pred EeCCc
Q psy2671 529 WNMKT 533 (573)
Q Consensus 529 wd~~~ 533 (573)
.....
T Consensus 320 ~~~~~ 324 (330)
T 3hxj_A 320 LFNLE 324 (330)
T ss_dssp EEC--
T ss_pred Eeccc
Confidence 77644
No 236
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.91 E-value=1.5e-07 Score=99.70 Aligned_cols=309 Identities=13% Similarity=0.139 Sum_probs=175.6
Q ss_pred CCeEEEEeCCCeEEEEECCCCeeeEEecCCCCc----------E-EEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHW----------V-LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287 (573)
Q Consensus 219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~----------V-~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~ 287 (573)
+..++.++.++.|.-+|..+++.+.+....... + ..+++ ++..|+.++.|+.|..+|..+|+.+.+.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 456777888999999999999998877543211 0 11222 3557888999999999999999876543
Q ss_pred ccCCcccEEEEEecccccCCCCCEEEEEeC------CCcEEEEECCCCeEEEEecCC--C-c------------------
Q psy2671 288 MRGHKQWITALSWEPFHLNHQCRRFASSGK------DGAIRIWDVILSQCVRVLTSH--T-R------------------ 340 (573)
Q Consensus 288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~h--~-~------------------ 340 (573)
..........+...|.. .+ ..++.+.. +|.|+.+|..+++.+..+... . .
T Consensus 144 ~~~~~~~~~~~~~~P~v--~~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 220 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRV--VK-GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGD 220 (668)
T ss_dssp ECSCTTSSCBCCSCCEE--ET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSS
T ss_pred ccCCCCCcceecCCCEE--EC-CEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcc
Confidence 22111000001111111 12 23444332 589999999999887665321 0 0
Q ss_pred ----------cEEEEEECC-CcEEEEEeCCC-------------------eEEEEeCCCCeeeEeccC--CcceeeEEEe
Q psy2671 341 ----------SVTCIRWGG-SGLIYSASQDR-------------------TIKVWRASDGVMCRTLEG--HAHWVNTLAL 388 (573)
Q Consensus 341 ----------~v~~~~~~~-~~~l~s~s~d~-------------------~i~vw~~~~~~~~~~~~~--~~~~v~~~~~ 388 (573)
....+++.+ .+.++.++.++ +|..+|..+|+..-.++. |..+-.. .
T Consensus 221 ~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~--~ 298 (668)
T 1kv9_A 221 QYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT--A 298 (668)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC--C
T ss_pred ceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc--C
Confidence 001234443 35777777665 377788887776544332 2211100 0
Q ss_pred ccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc---EEEEEeCCCeEEEEcCCCCccceeeeccc------
Q psy2671 389 STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE---KLVSGSDDFTLFLWNPEKEKKSLARMTGH------ 459 (573)
Q Consensus 389 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~sg~~dg~i~lwd~~~~~~~~~~~~~h------ 459 (573)
. ...... ....+|+ .++.++.+|.++++|..+++.........
T Consensus 299 ~-~~~~~~---------------------------d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 350 (668)
T 1kv9_A 299 T-QQITLA---------------------------ELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEK 350 (668)
T ss_dssp C-SCEEEE---------------------------EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred C-CCcEEE---------------------------EeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccc
Confidence 0 000000 0001232 57788889999999887765431110000
Q ss_pred -----ccc------------------------EEEEEECCCCCEEEEe--------------------------------
Q psy2671 460 -----QQL------------------------INCVEFSPDGRIIASA-------------------------------- 478 (573)
Q Consensus 460 -----~~~------------------------v~~v~~sp~g~~las~-------------------------------- 478 (573)
..+ -..++|+|+..++...
T Consensus 351 ~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 430 (668)
T 1kv9_A 351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATD 430 (668)
T ss_dssp ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCC
T ss_pred cccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCC
Confidence 000 0126788876665541
Q ss_pred ----eCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCE-EEEEEc
Q psy2671 479 ----SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV-YAVDWA 553 (573)
Q Consensus 479 ----s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v-~~~~~s 553 (573)
..+|.|..||..+++.+...+.+. ......+...+.+++.++.|+.++.||.++++.+..+....+.. .-+.+.
T Consensus 431 ~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~ 509 (668)
T 1kv9_A 431 VPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFE 509 (668)
T ss_dssp CCGGGCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred CCCCCccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEE
Confidence 134889999999999877665332 22222344567788899999999999999999876654332111 123445
Q ss_pred cCCC-EEEEee
Q psy2671 554 PDGE-KVASGG 563 (573)
Q Consensus 554 ~d~~-~l~s~~ 563 (573)
.+|+ +++.++
T Consensus 510 ~~G~~yva~~~ 520 (668)
T 1kv9_A 510 LAGRQYVAIMA 520 (668)
T ss_dssp ETTEEEEEEEE
T ss_pred ECCEEEEEEEe
Confidence 5666 444443
No 237
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.86 E-value=2.2e-07 Score=90.14 Aligned_cols=102 Identities=14% Similarity=0.073 Sum_probs=68.9
Q ss_pred CCCCCEEEEeeCCCcEEEEeCCCC--eEEEeecC-------Cc---ceEEEEEECCCCCEEEEEeC---------CCcEE
Q psy2671 469 SPDGRIIASASFDKSIKLWDGRIG--KFITTLRG-------HV---QAVYMVAWSSDSRLLVSGSA---------DSTLK 527 (573)
Q Consensus 469 sp~g~~las~s~dg~i~lwd~~~~--~~~~~~~~-------h~---~~v~~v~~s~dg~~las~s~---------D~~v~ 527 (573)
++++..++..+. +.+.+.|.... +.+..+.- +. .....++++||++.++.+.. ++.+.
T Consensus 219 ~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ 297 (368)
T 1mda_H 219 ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS 297 (368)
T ss_dssp ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE
T ss_pred cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEE
Confidence 566666666666 89999998653 22222211 00 11112689999998876543 23566
Q ss_pred EEeCCcccccccccCcCCCEEEEEEccCCCE-EEEee-CCCcEEEcc
Q psy2671 528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK-VASGG-KDKVLRLWQ 572 (573)
Q Consensus 528 vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~-l~s~~-~d~~i~iw~ 572 (573)
++|+.+.+.+..++... ....+.|+|||++ +++.. .++.|.+++
T Consensus 298 ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 298 SVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp EEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred EEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 99999999888886543 5789999999985 56666 589998886
No 238
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.85 E-value=0.00027 Score=76.64 Aligned_cols=349 Identities=11% Similarity=0.056 Sum_probs=196.6
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEec-------CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE-------GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~-------~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~ 280 (573)
..|.++...++|... .|..++-+..||..+++...... -....|.++...++|... .|+.+ -+.+||..+
T Consensus 163 ~~i~~i~~d~~g~lw-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lw-igt~~-Gl~~~d~~~ 239 (781)
T 3v9f_A 163 EQTWTATEAEDGKLY-IGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIW-IGTSK-GLALFNANT 239 (781)
T ss_dssp CCEEEEEEEETTEEE-EEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEE-EEETT-EEEEEETTT
T ss_pred cceEEEEECCCCCEE-EEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEE-EEeCC-cHheECCCC
Confidence 457888887777644 45666568889987765322111 113568999988888644 45555 588899876
Q ss_pred Cceeccccc------CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec--------------CCCc
Q psy2671 281 GKQIGQPMR------GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT--------------SHTR 340 (573)
Q Consensus 281 ~~~~~~~~~------~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--------------~h~~ 340 (573)
++....... .....|.++...+ ++ .+..|+..+-|.++|........... ....
T Consensus 240 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~-----~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~ 313 (781)
T 3v9f_A 240 ETFTNFHNNPGNIHGALSSYIFSIKQLK-----DN-KLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNA 313 (781)
T ss_dssp TEEEC-----------CCCCEEEEEECT-----TS-EEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSS
T ss_pred CcEEEEEcCCCccccccCceEEEEEECC-----CC-CEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCC
Confidence 643211100 1124466665432 33 45556664667888887654322111 2345
Q ss_pred cEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEec---------cCCcceeeEEEeccCceeEEEEcCCCceeeCCCCc
Q psy2671 341 SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL---------EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP 411 (573)
Q Consensus 341 ~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~---------~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 411 (573)
.|.++....++.++.|+.++-|..++...+...... ......|.++....+..+=+.....+-..+++...
T Consensus 314 ~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~ 393 (781)
T 3v9f_A 314 SARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKR 393 (781)
T ss_dssp CEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEE
T ss_pred eEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCC
Confidence 789999988899999998888999987755432211 01224577777665544433333333333333211
Q ss_pred hhhh---hhhh--hhee--eeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec---cccccEEEEEECCCCCEEEEeeCC
Q psy2671 412 EESS---KHAL--AKYQ--AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT---GHQQLINCVEFSPDGRIIASASFD 481 (573)
Q Consensus 412 ~~~~---~~~~--~~~~--~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~---~h~~~v~~v~~sp~g~~las~s~d 481 (573)
.... .... .... ...+++ .|-.|+.++-+..++..+... ..+. .....|.++...++|.+.+ |+.
T Consensus 394 ~~~~~~~~~~~~~~~v~~i~~d~~g-~lWigt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~- 468 (781)
T 3v9f_A 394 VAIYNKENRELLSNSVLCSLKDSEG-NLWFGTYLGNISYYNTRLKKF--QIIELEKNELLDVRVFYEDKNKKIWI-GTH- 468 (781)
T ss_dssp EEECC-----CCCSBEEEEEECTTS-CEEEEETTEEEEEECSSSCEE--EECCSTTTCCCCEEEEEECTTSEEEE-EET-
T ss_pred eEEEccCCCCCCCcceEEEEECCCC-CEEEEeccCCEEEEcCCCCcE--EEeccCCCCCCeEEEEEECCCCCEEE-EEC-
Confidence 0000 0000 0011 112334 455577767788888765432 2221 1345689999998887655 444
Q ss_pred CcEEEEeCCCCeEEEeecCC-----cceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccc--cC-cCCCEEEEEEc
Q psy2671 482 KSIKLWDGRIGKFITTLRGH-----VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL--PG-HGDEVYAVDWA 553 (573)
Q Consensus 482 g~i~lwd~~~~~~~~~~~~h-----~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l--~~-h~~~v~~~~~s 553 (573)
+-+..||..+++........ ...|.++...++|.+.+ |+.++-+..||..+++...-. .+ ....|.++...
T Consensus 469 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d 547 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRS 547 (781)
T ss_dssp TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEEC
T ss_pred CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEEC
Confidence 55888998776543222111 35789999999988665 444344777888765432211 11 23578999888
Q ss_pred cCCCEEEEeeCCCcEEEcc
Q psy2671 554 PDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 554 ~d~~~l~s~~~d~~i~iw~ 572 (573)
++|+..++. .+|.+..|+
T Consensus 548 ~~g~lWi~T-~~Glv~~~d 565 (781)
T 3v9f_A 548 SKGQMWLAT-GEGLVCFPS 565 (781)
T ss_dssp TTSCEEEEE-TTEEEEESC
T ss_pred CCCCEEEEE-CCCceEEEC
Confidence 888755543 366535553
No 239
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.72 E-value=0.00069 Score=73.44 Aligned_cols=346 Identities=10% Similarity=0.039 Sum_probs=192.6
Q ss_pred CcEEEEEEcC--CCCeEEEEeCCCeEEEEECCCCeeeEEec-----CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671 208 EAVISVKFSP--NGRSLASGSGDTTVRFWDVTTQTPLFKCE-----GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280 (573)
Q Consensus 208 ~~V~~~~fsp--~g~~las~s~d~~i~iwd~~~~~~~~~~~-----~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~ 280 (573)
..|.++...+ +|. |..++.++.+..||..+++...... -....|.++...++|. |..|+.++-+..||..+
T Consensus 115 ~~i~~i~~d~~~~g~-lwi~t~~~gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~ 192 (781)
T 3v9f_A 115 NDVTHITSSVQAGKG-LWVCTYYRGIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAEDGK-LYIGHVEGGLSILSLND 192 (781)
T ss_dssp SCEEEEEECSSTTSE-EEEEESSSCEEEEETTTTEEEEESTTTCTTCSCCCEEEEEEEETTE-EEEEETTTEEEEEETTT
T ss_pred CcceEEEecCccCCC-EEEEECCCCeeEEECCCCeEEeeccCcccCCCccceEEEEECCCCC-EEEEecCCCeEEEcCCC
Confidence 4688888877 665 4456545568889987765332211 1234588888877775 55566665688899877
Q ss_pred Cceecccc------cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec-------CCCccEEEEEE
Q psy2671 281 GKQIGQPM------RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT-------SHTRSVTCIRW 347 (573)
Q Consensus 281 ~~~~~~~~------~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-------~h~~~v~~~~~ 347 (573)
++...... ......|.++...+ ++. +..++.+ -+.+||..+++...... .....|.++..
T Consensus 193 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~-----~g~-lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 265 (781)
T 3v9f_A 193 KSVKHFVHDPQNPNSLPGNDVRCIYKDT-----NGN-IWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQ 265 (781)
T ss_dssp TEEEEECC--------CCSSEEEEEECT-----TCC-EEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEE
T ss_pred CceEeeecCCCCcccCCCCceeEEEEcC-----CCC-EEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEE
Confidence 64321100 00123466665432 344 4444555 58889987665433221 12356899998
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCeeeEecc--------------CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchh
Q psy2671 348 GGSGLIYSASQDRTIKVWRASDGVMCRTLE--------------GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE 413 (573)
Q Consensus 348 ~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~--------------~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 413 (573)
..++.++.|+..+-|.+++..++....... .....|.++....+..+=+.....+...+++....-
T Consensus 266 d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~ 345 (781)
T 3v9f_A 266 LKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTF 345 (781)
T ss_dssp CTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSC
T ss_pred CCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcc
Confidence 889999999986778888877654322111 122346666666554433333333333333321100
Q ss_pred hh---------hhh--hhheee--eCCCCcEEEEEeCCCeEEEEcCCCCccceee--eccccccEEEEEECCCCCEEEEe
Q psy2671 414 SS---------KHA--LAKYQA--QCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR--MTGHQQLINCVEFSPDGRIIASA 478 (573)
Q Consensus 414 ~~---------~~~--~~~~~~--~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~--~~~h~~~v~~v~~sp~g~~las~ 478 (573)
.. ... .....+ ..++| .|-.|+.++-+..|+..+....... .......|.++...++|.+.+ |
T Consensus 346 ~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-g 423 (781)
T 3v9f_A 346 HTWSYSPTQMNESSLSNKVVSSVCDDGQG-KLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-G 423 (781)
T ss_dssp EEEC----CCCSSCCSSSCEEEEEECTTS-CEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-E
T ss_pred eeeccCccccccCCCCCcceEEEEEcCCC-CEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-E
Confidence 00 000 000111 12233 4556666666778886543211000 011235689999998887665 6
Q ss_pred eCCCcEEEEeCCCCeEEEeec--CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccC-----cCCCEEEEE
Q psy2671 479 SFDKSIKLWDGRIGKFITTLR--GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG-----HGDEVYAVD 551 (573)
Q Consensus 479 s~dg~i~lwd~~~~~~~~~~~--~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~-----h~~~v~~~~ 551 (573)
+.++-+..+|.++++...... .....|.++...++|.+.+ |+. +.|..||..+++....... ....|.++.
T Consensus 424 t~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 501 (781)
T 3v9f_A 424 TYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIA 501 (781)
T ss_dssp ETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEE
T ss_pred eccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEE
Confidence 666779999988776433221 1345789999888887655 444 5688999877654321111 135789998
Q ss_pred EccCCCEEEEeeCCC
Q psy2671 552 WAPDGEKVASGGKDK 566 (573)
Q Consensus 552 ~s~d~~~l~s~~~d~ 566 (573)
..++|+..+.....|
T Consensus 502 ~d~~g~lWigt~~~G 516 (781)
T 3v9f_A 502 QDSEGRFWIGTFGGG 516 (781)
T ss_dssp ECTTCCEEEEESSSC
T ss_pred EcCCCCEEEEEcCCC
Confidence 888887555433344
No 240
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.71 E-value=3.7e-06 Score=87.14 Aligned_cols=309 Identities=14% Similarity=0.123 Sum_probs=169.1
Q ss_pred CCeEEEEeC-CCeEEEEEC-CCCeeeEEecCCCCc-----------EEEEEEcCCCCe----EEEEeeCCeEEEEECCCC
Q psy2671 219 GRSLASGSG-DTTVRFWDV-TTQTPLFKCEGHKHW-----------VLCIAWSPDSKQ----LVSGCKNGVIHAWDSSTG 281 (573)
Q Consensus 219 g~~las~s~-d~~i~iwd~-~~~~~~~~~~~h~~~-----------V~~v~~s~dg~~----l~sgs~dg~i~vwd~~~~ 281 (573)
+..+..++. ++.|.-+|. .+++.+.+....... ...++++|.+.. |+.++.|+.+..+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 446667777 888999999 899988776533210 123456544445 888999999999999999
Q ss_pred ceeccccc-CCcccEEEEEecccccCCCCCEEEEEe------CCCcEEEEECCCCeEEEEecCCCcc-------------
Q psy2671 282 KQIGQPMR-GHKQWITALSWEPFHLNHQCRRFASSG------KDGAIRIWDVILSQCVRVLTSHTRS------------- 341 (573)
Q Consensus 282 ~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~l~s~~------~dg~v~iwd~~~~~~~~~~~~h~~~------------- 341 (573)
+.+.+... .+... ..+.-.|.. .+ ..++.++ .+|.|+-+|..+++.+-........
T Consensus 142 ~~~W~~~~~~~~~~-~~~~ssP~v--~~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 142 ETVWKVENSDIKVG-STLTIAPYV--VK-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp CEEEEEECCCGGGT-CBCCSCCEE--ET-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CEEEeecCCCCCcc-ceeecCCEE--EC-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 87654221 11100 001111111 12 2444443 3799999999999877654322110
Q ss_pred ------------------------E-EEEEEC-CCcEEEEEeCCC----------------eEEEEeCCCCeeeEeccCC
Q psy2671 342 ------------------------V-TCIRWG-GSGLIYSASQDR----------------TIKVWRASDGVMCRTLEGH 379 (573)
Q Consensus 342 ------------------------v-~~~~~~-~~~~l~s~s~d~----------------~i~vw~~~~~~~~~~~~~~ 379 (573)
+ ..+.+. ..+.++.++.+. +|.-+|.++|+..-.++..
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~ 297 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKT 297 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESS
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecC
Confidence 0 011222 345677766543 6777777777655333221
Q ss_pred cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC---cEEEEEeCCCeEEEEcCCCCccceeee
Q psy2671 380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG---EKLVSGSDDFTLFLWNPEKEKKSLARM 456 (573)
Q Consensus 380 ~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~sg~~dg~i~lwd~~~~~~~~~~~ 456 (573)
.+....+...... ... .....+| ..++.++.+|.++++|.++++......
T Consensus 298 ~~d~wd~d~~~~p-~l~--------------------------d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 298 PHDEWDYAGVNVM-MLS--------------------------EQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp TTCSSCCCCCCCC-EEE--------------------------EEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCccccccCCCcc-EEE--------------------------eccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 1100000000000 000 0000234 456778888889888887765432211
Q ss_pred cc------------ccccE--------------------------EEEEECCCCCEEEEee-------------------
Q psy2671 457 TG------------HQQLI--------------------------NCVEFSPDGRIIASAS------------------- 479 (573)
Q Consensus 457 ~~------------h~~~v--------------------------~~v~~sp~g~~las~s------------------- 479 (573)
.. ...++ ..++|+|+..++.+..
T Consensus 351 ~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~ 430 (599)
T 1w6s_A 351 LDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQF 430 (599)
T ss_dssp SSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcc
Confidence 10 00001 2356777766654421
Q ss_pred --------------------CCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc
Q psy2671 480 --------------------FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD 539 (573)
Q Consensus 480 --------------------~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~ 539 (573)
.+|.+.-||+.+++.+...+.. .+...-.....+.++..++.|+.++.||.++++.+-.
T Consensus 431 ~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~ 509 (599)
T 1w6s_A 431 FVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWK 509 (599)
T ss_dssp CCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred eecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEE
Confidence 3478999999999877665311 1111111223566777899999999999999998765
Q ss_pred ccCcCC-CEEEEEEccCCCEE
Q psy2671 540 LPGHGD-EVYAVDWAPDGEKV 559 (573)
Q Consensus 540 l~~h~~-~v~~~~~s~d~~~l 559 (573)
++-... ...-+.|..+|++.
T Consensus 510 ~~l~~g~~~~P~~y~~~G~qy 530 (599)
T 1w6s_A 510 FKIPSGAIGYPMTYTHKGTQY 530 (599)
T ss_dssp EECSSCCCSCCEEEEETTEEE
T ss_pred eeCCCCcEeccEEEEeCCEEE
Confidence 532221 11224566788743
No 241
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.70 E-value=3.1e-06 Score=87.75 Aligned_cols=306 Identities=16% Similarity=0.133 Sum_probs=168.9
Q ss_pred CCeEEEEeC-CCeEEEEEC-CCCeeeEEecCCCCc----------E-EEEEEcCCCCeEEEEeeCCeEEEEECCCCceec
Q psy2671 219 GRSLASGSG-DTTVRFWDV-TTQTPLFKCEGHKHW----------V-LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285 (573)
Q Consensus 219 g~~las~s~-d~~i~iwd~-~~~~~~~~~~~h~~~----------V-~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~ 285 (573)
+..+..++. ++.|.-+|. .+++.+.+....... + ..++. ++..++.++.|+.+..+|..+|+.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 445666777 889999999 899988776432210 0 11222 35578888999999999999998765
Q ss_pred ccc-cCCcccEEEEEecccccCCCCCEEEEEeC------CCcEEEEECCCCeEEEEecCCCcc-----------------
Q psy2671 286 QPM-RGHKQWITALSWEPFHLNHQCRRFASSGK------DGAIRIWDVILSQCVRVLTSHTRS----------------- 341 (573)
Q Consensus 286 ~~~-~~h~~~v~~~~~~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~h~~~----------------- 341 (573)
+.. ..+... ..+.-.|.. .+ ..++.++. ++.|+.+|..+++.+..+......
T Consensus 140 ~~~~~~~~~~-~~~~~~P~v--~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G 215 (571)
T 2ad6_A 140 EVEVCDPKVG-STLTQAPFV--AK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYG 215 (571)
T ss_dssp EEECCCGGGT-CBCCSCCEE--ET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred EecCCCCCcc-ceeccCCEE--EC-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccc
Confidence 421 111100 001111111 12 34444443 789999999999877654321110
Q ss_pred --------------------E-EEEEECC-CcEEEEEeCC----------------CeEEEEeCCCCeeeEeccC--Ccc
Q psy2671 342 --------------------V-TCIRWGG-SGLIYSASQD----------------RTIKVWRASDGVMCRTLEG--HAH 381 (573)
Q Consensus 342 --------------------v-~~~~~~~-~~~l~s~s~d----------------~~i~vw~~~~~~~~~~~~~--~~~ 381 (573)
+ ..+++.+ .+.++.++.+ ++|..+|..+|+..-.++. |..
T Consensus 216 ~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~ 295 (571)
T 2ad6_A 216 QFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDE 295 (571)
T ss_dssp CSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCS
T ss_pred ccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcc
Confidence 0 0122322 3456655532 2477777777765433321 111
Q ss_pred eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC---cEEEEEeCCCeEEEEcCCCCccceeeecc
Q psy2671 382 WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG---EKLVSGSDDFTLFLWNPEKEKKSLARMTG 458 (573)
Q Consensus 382 ~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~sg~~dg~i~lwd~~~~~~~~~~~~~ 458 (573)
+-... .. ... ......+| ..++.++.+|.+..+|..+++.......+
T Consensus 296 ~d~~~--~~-~p~---------------------------l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~ 345 (571)
T 2ad6_A 296 WDFAG--VN-QMV---------------------------LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVD 345 (571)
T ss_dssp SCCCC--CC-CCE---------------------------EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred ccccc--CC-CCE---------------------------EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeeccc
Confidence 00000 00 000 00000234 24667788888988888776543221111
Q ss_pred c------------cccE--------------------------EEEEECCCCCEEEEee---------------------
Q psy2671 459 H------------QQLI--------------------------NCVEFSPDGRIIASAS--------------------- 479 (573)
Q Consensus 459 h------------~~~v--------------------------~~v~~sp~g~~las~s--------------------- 479 (573)
. ..++ ..++|+|+..++.+..
T Consensus 346 ~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~ 425 (571)
T 2ad6_A 346 PAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFV 425 (571)
T ss_dssp TTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCC
T ss_pred CCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccc
Confidence 1 0011 2357888877776653
Q ss_pred ----------------CCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCc
Q psy2671 480 ----------------FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543 (573)
Q Consensus 480 ----------------~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h 543 (573)
.+|.+..||..+++.+..+.... .+....+...+..++.++.|+.|+.||.++++.+..+...
T Consensus 426 g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 426 GATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp CEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 35789999999998877654221 1222222334667778999999999999999987655422
Q ss_pred CCC-EEEEEEccCCCEEEE
Q psy2671 544 GDE-VYAVDWAPDGEKVAS 561 (573)
Q Consensus 544 ~~~-v~~~~~s~d~~~l~s 561 (573)
... -.-+.+..+|+.++.
T Consensus 505 ~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 505 SGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp SCCCSCCEEEEETTEEEEE
T ss_pred CCcEeeeEEEEECCEEEEE
Confidence 111 112345677775543
No 242
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.65 E-value=5.2e-06 Score=80.98 Aligned_cols=215 Identities=15% Similarity=0.119 Sum_probs=130.1
Q ss_pred EEEEEeCCCcEEEEECCCC----eEEEEec-------CCCccEEEEEECCCcEEEEEeCC------CeEEEEeCCCCeee
Q psy2671 311 RFASSGKDGAIRIWDVILS----QCVRVLT-------SHTRSVTCIRWGGSGLIYSASQD------RTIKVWRASDGVMC 373 (573)
Q Consensus 311 ~l~s~~~dg~v~iwd~~~~----~~~~~~~-------~h~~~v~~~~~~~~~~l~s~s~d------~~i~vw~~~~~~~~ 373 (573)
.++++..++.|.++|+.+. +.++++. .....-..+...+++.++++..+ +.|.+.|..+++.+
T Consensus 98 l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~ 177 (462)
T 2ece_A 98 LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPL 177 (462)
T ss_dssp EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEE
T ss_pred EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEE
Confidence 4566777899999998754 5555552 01123345566788865555444 78999999988887
Q ss_pred EeccCCcc---eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe--------------
Q psy2671 374 RTLEGHAH---WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS-------------- 436 (573)
Q Consensus 374 ~~~~~~~~---~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-------------- 436 (573)
.++..... .-..+.+ +|+++.+++..
T Consensus 178 ~~~~~~~~~~~~~Yd~~~-------------------------------------~p~~~~mvsS~wg~p~~~~~g~~~~ 220 (462)
T 2ece_A 178 GKWEIDRGDQYLAYDFWW-------------------------------------NLPNEVLVSSEWAVPNTIEDGLKLE 220 (462)
T ss_dssp EECCSBCTTCCCCCCEEE-------------------------------------ETTTTEEEECBCCCHHHHTTCCCTT
T ss_pred EEEccCCCCccccceEEE-------------------------------------CCCCCEEEEccCcCccccccccchh
Confidence 77652111 0111222 24455555543
Q ss_pred -----CCCeEEEEcCCCCccceeeecc--ccccEEEEEE--CCCCCEEEEee------CCCcEEEEeCCCCeE--EEee-
Q psy2671 437 -----DDFTLFLWNPEKEKKSLARMTG--HQQLINCVEF--SPDGRIIASAS------FDKSIKLWDGRIGKF--ITTL- 498 (573)
Q Consensus 437 -----~dg~i~lwd~~~~~~~~~~~~~--h~~~v~~v~~--sp~g~~las~s------~dg~i~lwd~~~~~~--~~~~- 498 (573)
.+.+|.+||+.+. +....+.- .......+.| +|+|+++.+++ .+++|.+|....++. .+.+
T Consensus 221 ~~~~~~~d~V~v~D~~~~-k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vId 299 (462)
T 2ece_A 221 HLKDRYGNRIHFWDLRKR-KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIE 299 (462)
T ss_dssp THHHHSCCEEEEEETTTT-EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEE
T ss_pred hhhhccCCEEEEEECCCC-cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEe
Confidence 4678999999875 33333322 1123445666 99999887776 566887765433321 1111
Q ss_pred -cCC----------------cceEEEEEECCCCCEEEEEeC-CCcEEEEeCCcc---cccccccCc-----------C--
Q psy2671 499 -RGH----------------VQAVYMVAWSSDSRLLVSGSA-DSTLKVWNMKTK---KIEQDLPGH-----------G-- 544 (573)
Q Consensus 499 -~~h----------------~~~v~~v~~s~dg~~las~s~-D~~v~vwd~~~~---~~~~~l~~h-----------~-- 544 (573)
... ......+.+|+||++|.++.. .+.|.+||+... +.+..+.-. .
T Consensus 300 i~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~ 379 (462)
T 2ece_A 300 IPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKL 379 (462)
T ss_dssp ECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCC
T ss_pred CCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccC
Confidence 110 134567899999999887764 678999998532 333332211 0
Q ss_pred -CCEEEEEEccCCCEEEEee
Q psy2671 545 -DEVYAVDWAPDGEKVASGG 563 (573)
Q Consensus 545 -~~v~~~~~s~d~~~l~s~~ 563 (573)
+.-..+.++|||++|..+.
T Consensus 380 ~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 380 TGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCEEEEcCCCCEEEEEc
Confidence 0135688999999998776
No 243
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.64 E-value=1.2e-05 Score=83.36 Aligned_cols=79 Identities=20% Similarity=0.340 Sum_probs=51.7
Q ss_pred CCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCE-EEEEEccCCCEE
Q psy2671 481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV-YAVDWAPDGEKV 559 (573)
Q Consensus 481 dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v-~~~~~s~d~~~l 559 (573)
+|.|.-||+.+++.+....... .+..-.....+.+++.++.|+.++.||.++++.+-.++...+.. .-+.|..+|++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence 6889999999998876654321 11111112246678889999999999999999886655332211 125667788754
Q ss_pred E
Q psy2671 560 A 560 (573)
Q Consensus 560 ~ 560 (573)
+
T Consensus 544 v 544 (582)
T 1flg_A 544 L 544 (582)
T ss_dssp E
T ss_pred E
Confidence 3
No 244
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.61 E-value=2.4e-05 Score=76.37 Aligned_cols=146 Identities=18% Similarity=0.202 Sum_probs=90.2
Q ss_pred CCCCeEEE-EeCCCeEEEEECCCC----eeeEEec--------CCCCcEEEEEEcCCCCeEEEEeeC------CeEEEEE
Q psy2671 217 PNGRSLAS-GSGDTTVRFWDVTTQ----TPLFKCE--------GHKHWVLCIAWSPDSKQLVSGCKN------GVIHAWD 277 (573)
Q Consensus 217 p~g~~las-~s~d~~i~iwd~~~~----~~~~~~~--------~h~~~V~~v~~s~dg~~l~sgs~d------g~i~vwd 277 (573)
+++++|+. +..+++|.++|+.+. +.....+ +- ..-..+..+|+| .++++..+ |.|.+.|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~-s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGY-SRLHTVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCE-EEEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCC-CcccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 78887755 556789999998754 3333332 11 123456788999 66666555 7899999
Q ss_pred CCCCceecccccC-Cc-ccEEEEEecccccCCCCCEEEEEe-------------------CCCcEEEEECCCCeEEEEec
Q psy2671 278 SSTGKQIGQPMRG-HK-QWITALSWEPFHLNHQCRRFASSG-------------------KDGAIRIWDVILSQCVRVLT 336 (573)
Q Consensus 278 ~~~~~~~~~~~~~-h~-~~v~~~~~~~~~~~~~~~~l~s~~-------------------~dg~v~iwd~~~~~~~~~~~ 336 (573)
..+++.+.....+ .. ..-+.+-|.| +.+.++++. ...+|.+||+.+++.+..+.
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p-----~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~ 245 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNL-----PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT 245 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEET-----TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred CCCCeEEEEEccCCCCccccceEEECC-----CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence 9988766543322 11 1112233333 556677664 36899999999887777765
Q ss_pred CC--CccEEEEEE--CCCc-EEEEE-e-----CCCeEEEEeCCC
Q psy2671 337 SH--TRSVTCIRW--GGSG-LIYSA-S-----QDRTIKVWRASD 369 (573)
Q Consensus 337 ~h--~~~v~~~~~--~~~~-~l~s~-s-----~d~~i~vw~~~~ 369 (573)
.- ......+.| ++++ .++.+ - .+++|.+|....
T Consensus 246 vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~ 289 (462)
T 2ece_A 246 LGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED 289 (462)
T ss_dssp SCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET
T ss_pred cCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC
Confidence 42 123445555 7776 44444 3 566777766543
No 245
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.54 E-value=1.3e-05 Score=85.05 Aligned_cols=275 Identities=13% Similarity=0.094 Sum_probs=140.8
Q ss_pred EEEEcC-CCCeEEEEeCCC-----------eEEEEECCCCee--eEEe-cCCCCcEEEEEEcCCCCeEEEEee-CCeEEE
Q psy2671 212 SVKFSP-NGRSLASGSGDT-----------TVRFWDVTTQTP--LFKC-EGHKHWVLCIAWSPDSKQLVSGCK-NGVIHA 275 (573)
Q Consensus 212 ~~~fsp-~g~~las~s~d~-----------~i~iwd~~~~~~--~~~~-~~h~~~V~~v~~s~dg~~l~sgs~-dg~i~v 275 (573)
++++.| +++.++.|+.+. .+.+||..+++- +... ..+.....++++.++|+.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556777 888888887543 688999887642 2222 223334455788899998888884 458999
Q ss_pred EECCCCceecc-cccCCcccEEEEEecccccCCCCCEEEEEe-CC-----CcEEEEECCCCeEEEEec-----CCCccEE
Q psy2671 276 WDSSTGKQIGQ-PMRGHKQWITALSWEPFHLNHQCRRFASSG-KD-----GAIRIWDVILSQCVRVLT-----SHTRSVT 343 (573)
Q Consensus 276 wd~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~-~d-----g~v~iwd~~~~~~~~~~~-----~h~~~v~ 343 (573)
||+.+.+-... .+...... .++.. -.+++.++.|| .+ ..+.+||..+.+....-. .....-.
T Consensus 270 yd~~t~~W~~~~~~~~~R~~-~s~~~-----~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~ 343 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGY-QSSAT-----MSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ 343 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSS-CEEEE-----CTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT
T ss_pred ecCcCCceeECCCCCccccc-cceEE-----ecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc
Confidence 99876642211 11111111 11111 12567888888 34 568999998776544210 0000000
Q ss_pred EEEECCCcEEEEEeCC---------CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhh
Q psy2671 344 CIRWGGSGLIYSASQD---------RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEES 414 (573)
Q Consensus 344 ~~~~~~~~~l~s~s~d---------~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (573)
++....+..++.|+.+ ..+..||..+.........+.. . . ...+...
T Consensus 344 ~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~-------~-------------~-~~~~~~~--- 399 (656)
T 1k3i_A 344 GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS-------N-------------R-GVAPDAM--- 399 (656)
T ss_dssp GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEE-------T-------------T-EECCCCB---
T ss_pred ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccc-------c-------------c-ccCCCCC---
Confidence 0000111123334333 3456666554432111100000 0 0 0000000
Q ss_pred hhhhhhheeee---CCCCcEEEEEeCCC-----------eEEEEcCCCCccceee--eccccccEEEEEECCCCCEEEEe
Q psy2671 415 SKHALAKYQAQ---CPEGEKLVSGSDDF-----------TLFLWNPEKEKKSLAR--MTGHQQLINCVEFSPDGRIIASA 478 (573)
Q Consensus 415 ~~~~~~~~~~~---~~~~~~l~sg~~dg-----------~i~lwd~~~~~~~~~~--~~~h~~~v~~v~~sp~g~~las~ 478 (573)
...+. ..++++++.|+.++ .+.+||+.+..-.... .......-.+..+.|+|++++.|
T Consensus 400 ------~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~G 473 (656)
T 1k3i_A 400 ------CGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITG 473 (656)
T ss_dssp ------TCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEEC
T ss_pred ------CCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEEC
Confidence 00000 12466777776432 6778887654321111 00111112345677899999999
Q ss_pred eCC-----------CcEEEEeCCCCeEEEe--ecCCcceEEEEEECCCCCEEEEEeC
Q psy2671 479 SFD-----------KSIKLWDGRIGKFITT--LRGHVQAVYMVAWSSDSRLLVSGSA 522 (573)
Q Consensus 479 s~d-----------g~i~lwd~~~~~~~~~--~~~h~~~v~~v~~s~dg~~las~s~ 522 (573)
+.+ ..+.+||..+.+.... +........+..+.|||+.++.||.
T Consensus 474 G~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 474 GQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 865 4689999887654321 1111112234456799999999885
No 246
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.54 E-value=1.2e-05 Score=73.58 Aligned_cols=186 Identities=9% Similarity=0.050 Sum_probs=120.5
Q ss_pred EEEEEECCCcEEEEEeC---CCeEEEEeCCCCeeeEeccCCcc-eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671 342 VTCIRWGGSGLIYSASQ---DRTIKVWRASDGVMCRTLEGHAH-WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH 417 (573)
Q Consensus 342 v~~~~~~~~~~l~s~s~---d~~i~vw~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (573)
...+.+++++.++.++. +++|+++|..+++....+.-... ....+++.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~---------------------------- 74 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL---------------------------- 74 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE----------------------------
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe----------------------------
Confidence 56788888777776653 68999999999987765431110 11111111
Q ss_pred hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe
Q psy2671 418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497 (573)
Q Consensus 418 ~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~ 497 (573)
.+...++.-.++.+.++|..+.+. +..+.-.... ...+++||+.+.++..++.|.++|..+.+.+..
T Consensus 75 ----------g~~lyv~t~~~~~v~viD~~t~~v-~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~ 141 (266)
T 2iwa_A 75 ----------NEKLYQVVWLKNIGFIYDRRTLSN-IKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKK 141 (266)
T ss_dssp ----------TTEEEEEETTCSEEEEEETTTTEE-EEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEE
T ss_pred ----------CCEEEEEEecCCEEEEEECCCCcE-EEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEE
Confidence 123445555778999999886543 3333211111 234567887776666788999999999887776
Q ss_pred ecCC-----cceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCc-------------CCCEEEEEEccCCCEE
Q psy2671 498 LRGH-----VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH-------------GDEVYAVDWAPDGEKV 559 (573)
Q Consensus 498 ~~~h-----~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h-------------~~~v~~~~~s~d~~~l 559 (573)
+.-- ....+.+.|. +|+..+....++.|.+-|..+++.+..+.-. ....+.++|+|+++.|
T Consensus 142 I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~l 220 (266)
T 2iwa_A 142 HNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRI 220 (266)
T ss_dssp EECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEE
T ss_pred EEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEE
Confidence 6521 1236678888 7766666656889999999999876655321 1356899999998766
Q ss_pred EEe-eCCCcEE
Q psy2671 560 ASG-GKDKVLR 569 (573)
Q Consensus 560 ~s~-~~d~~i~ 569 (573)
..+ ....++.
T Consensus 221 fVTgk~~~~v~ 231 (266)
T 2iwa_A 221 FVTGKLWPKLF 231 (266)
T ss_dssp EEEETTCSEEE
T ss_pred EEECCCCCeEE
Confidence 544 4455554
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.52 E-value=6.8e-06 Score=87.05 Aligned_cols=298 Identities=13% Similarity=0.115 Sum_probs=159.7
Q ss_pred CCeEEEEeeCCeEEEEECCCCceecccccCCcccE---EEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC
Q psy2671 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWI---TALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS 337 (573)
Q Consensus 261 g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v---~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 337 (573)
+..|+.++.++.|..+|..+|+.+.+......... .+...........+.++..++.|+.|..+|..+++.+.....
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 145 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeecc
Confidence 45678888889999999999987654321110000 000000000001234677788899999999999988766543
Q ss_pred CC----ccEEE-EEECCCcEEEEEeC------CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCcee-
Q psy2671 338 HT----RSVTC-IRWGGSGLIYSASQ------DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK- 405 (573)
Q Consensus 338 h~----~~v~~-~~~~~~~~l~s~s~------d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~- 405 (573)
.. ..+.+ ... .++.++.+.. ++.|..+|..+|+.+-.+..... .+.... ....+.
T Consensus 146 ~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~-------~p~~~~-----~~~~~~~ 212 (668)
T 1kv9_A 146 TDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPG-------DPALPY-----EHPELRE 212 (668)
T ss_dssp SCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCC-------CTTSCC-----SSHHHHH
T ss_pred CCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCC-------CCCccc-----ccccccc
Confidence 21 11111 111 1455666543 58999999999987644321000 000000 000000
Q ss_pred -eCCCCchhhhhh----hhhheeeeCCCCcEEEEEeCCC-------------------eEEEEcCCCCccceeeecc-cc
Q psy2671 406 -YDPANPEESSKH----ALAKYQAQCPEGEKLVSGSDDF-------------------TLFLWNPEKEKKSLARMTG-HQ 460 (573)
Q Consensus 406 -~~~~~~~~~~~~----~~~~~~~~~~~~~~l~sg~~dg-------------------~i~lwd~~~~~~~~~~~~~-h~ 460 (573)
.........-.. ..-......+....+..+..++ .|.-+|..+++..-..... |.
T Consensus 213 ~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~ 292 (668)
T 1kv9_A 213 AAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGD 292 (668)
T ss_dssp HHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTC
T ss_pred ccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCc
Confidence 000000000000 0000011224455666666555 3888888877654433322 21
Q ss_pred -------ccEEEEEECCCCC---EEEEeeCCCcEEEEeCCCCeEEEeecCCc------------ceE-------------
Q psy2671 461 -------QLINCVEFSPDGR---IIASASFDKSIKLWDGRIGKFITTLRGHV------------QAV------------- 505 (573)
Q Consensus 461 -------~~v~~v~~sp~g~---~las~s~dg~i~lwd~~~~~~~~~~~~h~------------~~v------------- 505 (573)
.+.....+..+|+ .++.++.+|.+.++|..+|+.+...+... .++
T Consensus 293 ~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~ 372 (668)
T 1kv9_A 293 SWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIV 372 (668)
T ss_dssp CSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEE
T ss_pred cccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeE
Confidence 2222223334665 68899999999999999999874332111 000
Q ss_pred -----------EEEEECCCCCEEEEE------------------------------------eCCCcEEEEeCCcccccc
Q psy2671 506 -----------YMVAWSSDSRLLVSG------------------------------------SADSTLKVWNMKTKKIEQ 538 (573)
Q Consensus 506 -----------~~v~~s~dg~~las~------------------------------------s~D~~v~vwd~~~~~~~~ 538 (573)
..++++|+..+++.. ..++.|..||+.+++.+-
T Consensus 373 ~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W 452 (668)
T 1kv9_A 373 MWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAW 452 (668)
T ss_dssp ESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEE
T ss_pred ECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEE
Confidence 015777776665542 134789999999998865
Q ss_pred cccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 539 DLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 539 ~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
..+.+ .......+...+..++.++.|+.++.|+
T Consensus 453 ~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d 485 (668)
T 1kv9_A 453 KVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYS 485 (668)
T ss_dssp EEEES-SSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred EccCC-CCCcCceeEeCCCEEEEECCcccchhhh
Confidence 54432 2333334555678888999999999886
No 248
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.48 E-value=0.00024 Score=65.82 Aligned_cols=250 Identities=10% Similarity=0.010 Sum_probs=134.3
Q ss_pred CeEEEEeeCCeEEEEECCCCceec----ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC
Q psy2671 262 KQLVSGCKNGVIHAWDSSTGKQIG----QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS 337 (573)
Q Consensus 262 ~~l~sgs~dg~i~vwd~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 337 (573)
.+|+.+.. +.|+.+++....... ..+........+++|.+. .+..+++....+.|..+++........+..
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~----~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 76 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCV----DKVVYWTDISEPSIGRASLHGGEPTTIIRQ 76 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETT----TTEEEEEETTTTEEEEEESSSCCCEEEECT
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecC----CCEEEEEECCCCEEEEEecCCCCcEEEEEC
Confidence 44555543 478888876543210 001111123456666542 234556666678999999876544333333
Q ss_pred CCccEEEEEECCC-cEEEEE-eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhh
Q psy2671 338 HTRSVTCIRWGGS-GLIYSA-SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS 415 (573)
Q Consensus 338 h~~~v~~~~~~~~-~~l~s~-s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (573)
.......+++.+. +.++.+ ...+.|.+++...................+++
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~v--------------------------- 129 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVT--------------------------- 129 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE---------------------------
T ss_pred CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEE---------------------------
Confidence 3346788888763 555544 45678888887532211111110011122222
Q ss_pred hhhhhheeeeCCCCcE-EEEEeC--CCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEE-EeeCCCcEEEEeCCC
Q psy2671 416 KHALAKYQAQCPEGEK-LVSGSD--DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIA-SASFDKSIKLWDGRI 491 (573)
Q Consensus 416 ~~~~~~~~~~~~~~~~-l~sg~~--dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~la-s~s~dg~i~lwd~~~ 491 (573)
.|.+.. .++... .+.|..+++....... .....-.....++++|++..|. +-...+.|..+|...
T Consensus 130 ----------d~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~-~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 130 ----------DPVRGNLYWTDWNRDNPKIETSHMDGTNRRI-LAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp ----------ETTTTEEEEEECCSSSCEEEEEETTSCCCEE-EECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE
T ss_pred ----------eeCCCEEEEEECCCCCcEEEEEecCCCCcEE-EEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC
Confidence 242333 333322 3567776654322111 1111223468899999876554 445668899999875
Q ss_pred CeEEEeecCCcceEEEEEECCCCCEEEEE-eCCCcEEEEeCCcccccccccCcC-CCEEEEEEccCCC
Q psy2671 492 GKFITTLRGHVQAVYMVAWSSDSRLLVSG-SADSTLKVWNMKTKKIEQDLPGHG-DEVYAVDWAPDGE 557 (573)
Q Consensus 492 ~~~~~~~~~h~~~v~~v~~s~dg~~las~-s~D~~v~vwd~~~~~~~~~l~~h~-~~v~~~~~s~d~~ 557 (573)
......+.+- .....++.. +..|+.+ ...+.|..+|..+++.+..+.... ...+.+++.|++.
T Consensus 199 ~~~~~~~~~~-~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 199 PGRRKVLEGL-QYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEEEEEECC-CSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CceEEEecCC-CCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 4433333322 223455543 4454444 456899999999888777665332 2466788888764
No 249
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.45 E-value=0.00033 Score=64.83 Aligned_cols=248 Identities=12% Similarity=0.011 Sum_probs=135.2
Q ss_pred eEEEEeCCCeEEEEECCCCeee-----EEecCCCCcEEEEEEcCCCCeEEEEe-eCCeEEEEECCCCceecccccCCccc
Q psy2671 221 SLASGSGDTTVRFWDVTTQTPL-----FKCEGHKHWVLCIAWSPDSKQLVSGC-KNGVIHAWDSSTGKQIGQPMRGHKQW 294 (573)
Q Consensus 221 ~las~s~d~~i~iwd~~~~~~~-----~~~~~h~~~V~~v~~s~dg~~l~sgs-~dg~i~vwd~~~~~~~~~~~~~h~~~ 294 (573)
+|..+.. +.|+.+++...... ..+.........++|++++..|+.+. .++.|.+++...+... .........
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~~~~~~~~ 80 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-TIIRQDLGS 80 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-EEECTTCCC
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE-EEEECCCCC
Confidence 4444443 46777777654210 11111123467899999776666544 5689999998765321 111111234
Q ss_pred EEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-CcEEEEEeCC---CeEEEEeCCCC
Q psy2671 295 ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQD---RTIKVWRASDG 370 (573)
Q Consensus 295 v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~d---~~i~vw~~~~~ 370 (573)
..++++.+. .+..+++....+.|.++++..................+++.+ .+.++.+... +.|..+++...
T Consensus 81 p~~ia~d~~----~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 81 PEGIALDHL----GRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp EEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred ccEEEEEec----CCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 566666542 234556666678899988864432222222224567888887 5676666543 57777665422
Q ss_pred eeeEec-cCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc-EEEEEeCCCeEEEEcCCC
Q psy2671 371 VMCRTL-EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE-KLVSGSDDFTLFLWNPEK 448 (573)
Q Consensus 371 ~~~~~~-~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~lwd~~~ 448 (573)
....+ .......+.+++ .+++. ..++-...+.|..+++..
T Consensus 157 -~~~~~~~~~~~~P~gia~-------------------------------------d~~~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 157 -NRRILAQDNLGLPNGLTF-------------------------------------DAFSSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp -CCEEEECTTCSCEEEEEE-------------------------------------ETTTTEEEEEETTTTEEEEEETTE
T ss_pred -CcEEEEECCCCCCcEEEE-------------------------------------cCCCCEEEEEECCCCEEEEEecCC
Confidence 11111 011111222222 24333 445555667888888764
Q ss_pred CccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc-ceEEEEEECCCCC
Q psy2671 449 EKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV-QAVYMVAWSSDSR 515 (573)
Q Consensus 449 ~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~-~~v~~v~~s~dg~ 515 (573)
... .....+ ......+++. ++.++++...++.|..+|..+++.+..+.... ...+.+++.|++.
T Consensus 199 ~~~-~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 199 PGR-RKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEE-EEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred Cce-EEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 321 111222 1223566654 34455555566899999999999888775332 2356777787764
No 250
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.40 E-value=0.0033 Score=65.56 Aligned_cols=336 Identities=10% Similarity=0.002 Sum_probs=168.1
Q ss_pred cEEEEEEcCCCCeEE-EEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee--CCeEEEEECCCCceec
Q psy2671 209 AVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK--NGVIHAWDSSTGKQIG 285 (573)
Q Consensus 209 ~V~~~~fsp~g~~la-s~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~--dg~i~vwd~~~~~~~~ 285 (573)
....+++.+.+..|. +-...+.|.+.++............-..-..|++.|.+.+|+.+.+ .+.|...++......
T Consensus 85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~- 163 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF- 163 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-
T ss_pred CcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE-
Confidence 567899998665554 4456789999998765332222233334578999997666766554 356766666533221
Q ss_pred ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEE
Q psy2671 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW 365 (573)
Q Consensus 286 ~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw 365 (573)
......-.+..++++.+. .++.+.+-+..+.|...|+..........+.......+++..+..+++-...+.|...
T Consensus 164 ~l~~~~~~~P~Glald~~----~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~ 239 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYE----EQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILAC 239 (619)
T ss_dssp EEECSSCSSEEEEEEETT----TTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEE
T ss_pred EEEeCCCCCCcEEEEEcc----CCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEE
Confidence 111122334566766542 2345555566677888887544332222222223345666666445555567888888
Q ss_pred eCCCCeeeEeccCCcceeeEEEeccCc-ee-EEEEcC-C----Cceee-CCCCchhhhhhhhhheeeeCCC---------
Q psy2671 366 RASDGVMCRTLEGHAHWVNTLALSTDY-LM-RVEATS-T----GGFKY-DPANPEESSKHALAKYQAQCPE--------- 428 (573)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~-~~~~~~-~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~--------- 428 (573)
|..+|.....+.........+.+.... .- ...... . ..+.. .+. ...+...||.
T Consensus 240 d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~---------~~~~~C~C~~g~~l~~d~~ 310 (619)
T 3s94_A 240 NKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPV---------KPFYQCACPTGVKLLENGK 310 (619)
T ss_dssp ESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSS---------TTSEEEECCTTCCBCTTSS
T ss_pred ECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCC---------CCCceEeCCchheecccCc
Confidence 887776554443322222222221100 00 000000 0 00000 000 0011222222
Q ss_pred ------CcEEEEEeCCCeEEEEcCCCCccceeeec-cccccEEEEEECCCCCEEE-EeeCCCcEEEEeCCCCeEEEeecC
Q psy2671 429 ------GEKLVSGSDDFTLFLWNPEKEKKSLARMT-GHQQLINCVEFSPDGRIIA-SASFDKSIKLWDGRIGKFITTLRG 500 (573)
Q Consensus 429 ------~~~l~sg~~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~sp~g~~la-s~s~dg~i~lwd~~~~~~~~~~~~ 500 (573)
..+|+.+ ..+.|+..++.........+. ..-..+..|+|++.+..|. +-...+.|+-++.........+..
T Consensus 311 ~C~~~~~~~Ll~~-~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~ 389 (619)
T 3s94_A 311 TCKDGATELLLLA-RRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTA 389 (619)
T ss_dssp CBCSSCSEEEEEE-ESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred ccCCCCceEEEEE-cccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEEC
Confidence 2233333 344566666654322111111 1123467899998555444 444678898888765433233333
Q ss_pred CcceEEEEEECCCCC-EEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEE
Q psy2671 501 HVQAVYMVAWSSDSR-LLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV 559 (573)
Q Consensus 501 h~~~v~~v~~s~dg~-~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l 559 (573)
.......+++.+.+. +..+-+..+.|.+.++.+......+...-....++++.|...+|
T Consensus 390 ~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~l 449 (619)
T 3s94_A 390 QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYM 449 (619)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEE
T ss_pred CCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcE
Confidence 333456778876444 45555567889999887543211112223456778888763343
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.39 E-value=4.6e-05 Score=68.83 Aligned_cols=181 Identities=9% Similarity=0.093 Sum_probs=114.1
Q ss_pred EEEEEECCCcEEEEEeCCC--eEEEEeCCCCeeeEeccCCcce-eeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671 342 VTCIRWGGSGLIYSASQDR--TIKVWRASDGVMCRTLEGHAHW-VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418 (573)
Q Consensus 342 v~~~~~~~~~~l~s~s~d~--~i~vw~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (573)
...+.|++...+.+.+.+| +|+.+|+.+++....+...... -..+++.
T Consensus 45 tqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~----------------------------- 95 (262)
T 3nol_A 45 TEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW----------------------------- 95 (262)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE-----------------------------
T ss_pred cceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe-----------------------------
Confidence 3567777433445556655 8999999999877655322110 0011110
Q ss_pred hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee
Q psy2671 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL 498 (573)
Q Consensus 419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~ 498 (573)
.+...+....++.+.+||..+.+. +..+.-.. ....+++|++.|+.+..++.|.++|..+.+.+..+
T Consensus 96 ---------g~~ly~ltw~~~~v~v~D~~t~~~-~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I 162 (262)
T 3nol_A 96 ---------KDKIVGLTWKNGLGFVWNIRNLRQ-VRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTI 162 (262)
T ss_dssp ---------TTEEEEEESSSSEEEEEETTTCCE-EEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEE
T ss_pred ---------CCEEEEEEeeCCEEEEEECccCcE-EEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEE
Confidence 123344445688999999887543 33332211 12334467777776666788999999999887775
Q ss_pred cCC--c---ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccC------------cCCCEEEEEEccCCCEEEE
Q psy2671 499 RGH--V---QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG------------HGDEVYAVDWAPDGEKVAS 561 (573)
Q Consensus 499 ~~h--~---~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~------------h~~~v~~~~~s~d~~~l~s 561 (573)
.-. . ..++.+.|. +|+..|..-.++.|.+.|.++++.+..+.- -.+-.+.++|+|+++.|..
T Consensus 163 ~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfV 241 (262)
T 3nol_A 163 TVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFV 241 (262)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEE
T ss_pred EeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEE
Confidence 431 1 335567776 777666665788999999999987544321 1235689999999888877
Q ss_pred eeCC
Q psy2671 562 GGKD 565 (573)
Q Consensus 562 ~~~d 565 (573)
.|+.
T Consensus 242 TGK~ 245 (262)
T 3nol_A 242 TGKL 245 (262)
T ss_dssp EETT
T ss_pred ECCC
Confidence 7754
No 252
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.38 E-value=5.5e-05 Score=68.30 Aligned_cols=179 Identities=7% Similarity=0.003 Sum_probs=115.7
Q ss_pred EEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcc-eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671 342 VTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAH-WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA 420 (573)
Q Consensus 342 v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (573)
...+.+.+...+.+.+.++.|+.+|+.+++....+ -... +-..+++
T Consensus 57 tqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~-------------------------------- 103 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLAS-------------------------------- 103 (268)
T ss_dssp EEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEE--------------------------------
T ss_pred cceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEE--------------------------------
Confidence 35677776556677788899999999998776544 1110 0011111
Q ss_pred heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC
Q psy2671 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG 500 (573)
Q Consensus 421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~ 500 (573)
-.+...+....++.+.+||..+.+. +..+....+ ...+++|++.|+.+..++.|.++|..+.+.+..+.-
T Consensus 104 ------~g~~Ly~ltw~~~~v~V~D~~Tl~~-~~ti~~~~e---GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 104 ------DGERLYQLTWTEGLLFTWSGMPPQR-ERTTRYSGE---GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp ------CSSCEEEEESSSCEEEEEETTTTEE-EEEEECSSC---CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ------eCCEEEEEEccCCEEEEEECCcCcE-EEEEeCCCc---eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 1123444555788999999887543 333322111 123346778777777789999999999988776643
Q ss_pred --Cc---ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccC-------------cCCCEEEEEEccCCCEEEEe
Q psy2671 501 --HV---QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG-------------HGDEVYAVDWAPDGEKVASG 562 (573)
Q Consensus 501 --h~---~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~-------------h~~~v~~~~~s~d~~~l~s~ 562 (573)
+. ..++.+.|. +|+..|..-.++.|.+-|.++++.+..+.- -.+-.+.++|.|+++.|...
T Consensus 174 ~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 174 KLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred CCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 21 235667777 776666555788999999999886544321 12356899999987777666
Q ss_pred eC
Q psy2671 563 GK 564 (573)
Q Consensus 563 ~~ 564 (573)
|+
T Consensus 253 GK 254 (268)
T 3nok_A 253 GK 254 (268)
T ss_dssp ET
T ss_pred CC
Confidence 54
No 253
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.38 E-value=0.00021 Score=65.25 Aligned_cols=194 Identities=12% Similarity=0.108 Sum_probs=125.5
Q ss_pred EEEEEecccccCCCCCEEEEEeC--CCcEEEEECCCCeEEEEecCCC-ccEEEEEECCCcEEEEE-eCCCeEEEEeCCCC
Q psy2671 295 ITALSWEPFHLNHQCRRFASSGK--DGAIRIWDVILSQCVRVLTSHT-RSVTCIRWGGSGLIYSA-SQDRTIKVWRASDG 370 (573)
Q Consensus 295 v~~~~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~l~s~-s~d~~i~vw~~~~~ 370 (573)
..++.|.+ ++..+++.+. ++.|++.|+.+++.+..+.... .....+++.++ .++.+ -.++.+.++|..+.
T Consensus 23 ~~Gl~~~~-----dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~-~lyv~t~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 23 TQGLVYAE-----NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNE-KLYQVVWLKNIGFIYDRRTL 96 (266)
T ss_dssp EEEEEECS-----TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETT-EEEEEETTCSEEEEEETTTT
T ss_pred cccEEEeC-----CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCC-EEEEEEecCCEEEEEECCCC
Confidence 45666654 3455666554 6799999999998887764222 12234555544 45444 45789999999988
Q ss_pred eeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc
Q psy2671 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK 450 (573)
Q Consensus 371 ~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~ 450 (573)
+.+.++..-. +.. ...+++|..+..+..++++.++|+++.+
T Consensus 97 ~v~~~i~~g~---------~~g------------------------------~glt~Dg~~l~vs~gs~~l~viD~~t~~ 137 (266)
T 2iwa_A 97 SNIKNFTHQM---------KDG------------------------------WGLATDGKILYGSDGTSILYEIDPHTFK 137 (266)
T ss_dssp EEEEEEECCS---------SSC------------------------------CEEEECSSSEEEECSSSEEEEECTTTCC
T ss_pred cEEEEEECCC---------CCe------------------------------EEEEECCCEEEEECCCCeEEEEECCCCc
Confidence 7766553110 000 0112445666666678899999998754
Q ss_pred cceeeecc-cc---ccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc-------------ceEEEEEECCC
Q psy2671 451 KSLARMTG-HQ---QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV-------------QAVYMVAWSSD 513 (573)
Q Consensus 451 ~~~~~~~~-h~---~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~-------------~~v~~v~~s~d 513 (573)
..-....+ .. ..++.+.|. +|++.+....++.|.+.|..+++.+..+.... ...+.++|+|+
T Consensus 138 v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~ 216 (266)
T 2iwa_A 138 LIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQE 216 (266)
T ss_dssp EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETT
T ss_pred EEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCC
Confidence 32222211 11 136778888 77777666678899999999999888775321 24589999999
Q ss_pred CCE-EEEEeCCCcEEEEeCCcc
Q psy2671 514 SRL-LVSGSADSTLKVWNMKTK 534 (573)
Q Consensus 514 g~~-las~s~D~~v~vwd~~~~ 534 (573)
++. ++++...+.+.+-++...
T Consensus 217 ~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 217 NKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTEEEEEETTCSEEEEEEEEEC
T ss_pred CCEEEEECCCCCeEEEEEEecc
Confidence 875 555657788888887554
No 254
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.35 E-value=4.5e-05 Score=82.08 Aligned_cols=195 Identities=14% Similarity=0.126 Sum_probs=112.8
Q ss_pred Cccc-cEEEEEEc-CCCCeeEEee-----CCCcEEEeeccCC-cceeeecCCCeeeeecccccccccccccCCCCCCccc
Q psy2671 108 GHAE-AVISVKFS-PNGRSLASGS-----GDTTVRFWDVTTQ-TPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEE 179 (573)
Q Consensus 108 gH~~-~V~~l~~s-~~~~~lat~s-----~D~~vrvWd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (573)
+|.- .+.+.+|| |||++||-+. ...+|+++|+.++ +.+.. .
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-------------------------------~ 218 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-------------------------------K 218 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-------------------------------C
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-------------------------------c
Confidence 4554 78899999 9999888432 2236999999887 42200 0
Q ss_pred eEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCC-----CeEEEEECCCCee--eEEec-CCCCc
Q psy2671 180 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD-----TTVRFWDVTTQTP--LFKCE-GHKHW 251 (573)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d-----~~i~iwd~~~~~~--~~~~~-~h~~~ 251 (573)
+ ......++|+|||+.|+....| ..|.++++.++.. ...+. .....
T Consensus 219 -----------------------~---~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~ 272 (751)
T 2xe4_A 219 -----------------------V---SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLF 272 (751)
T ss_dssp -----------------------E---EEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTC
T ss_pred -----------------------c---cCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCce
Confidence 0 0001256799999988877665 3688888877531 12222 23345
Q ss_pred EEEEEEcCCCCeEEEEeeC---CeEEEEECCCCce-e--cccccCCcccEEEEEecccccCCCCCEEE-EEeCC--C--c
Q psy2671 252 VLCIAWSPDSKQLVSGCKN---GVIHAWDSSTGKQ-I--GQPMRGHKQWITALSWEPFHLNHQCRRFA-SSGKD--G--A 320 (573)
Q Consensus 252 V~~v~~s~dg~~l~sgs~d---g~i~vwd~~~~~~-~--~~~~~~h~~~v~~~~~~~~~~~~~~~~l~-s~~~d--g--~ 320 (573)
...+.|||||++|+..+.+ ..|.++|+.++.. . .....+.......+.|. .++.|+ ....+ + .
T Consensus 273 ~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~------~g~~l~~~t~~~~a~~~~ 346 (751)
T 2xe4_A 273 SAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH------GTSHLVILTNEGGAVNHK 346 (751)
T ss_dssp EEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE------TTTEEEEEECTTTCTTCE
T ss_pred EEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee------eCCEEEEEeCCCCCCCcE
Confidence 6788999999998866543 4688889877521 1 12222233333333321 234443 33333 2 4
Q ss_pred EEEEECCC-CeEEE-EecCCC-ccEEEEEECCCcEEEEEeCCCeEEEE
Q psy2671 321 IRIWDVIL-SQCVR-VLTSHT-RSVTCIRWGGSGLIYSASQDRTIKVW 365 (573)
Q Consensus 321 v~iwd~~~-~~~~~-~~~~h~-~~v~~~~~~~~~~l~s~s~d~~i~vw 365 (573)
|..+++.. +.... .+.... ..+..+.+.++..+++...++..++|
T Consensus 347 L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 347 LLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp EEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEE
T ss_pred EEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEE
Confidence 55566654 22222 222222 24566777766677788888866555
No 255
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.35 E-value=0.0014 Score=61.91 Aligned_cols=235 Identities=12% Similarity=0.061 Sum_probs=125.6
Q ss_pred CcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC-C-cEEEEECC
Q psy2671 250 HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD-G-AIRIWDVI 327 (573)
Q Consensus 250 ~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d-g-~v~iwd~~ 327 (573)
.....++|+++|+.+++...++.|..||.......... ......++++.+ +++.+++.... + .|..++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~---~~~~p~gia~~~-----dG~l~vad~~~~~~~v~~~d~~ 103 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT---VEGKVSGLAFTS-----NGDLVATGWNADSIPVVSLVKS 103 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE---CSSEEEEEEECT-----TSCEEEEEECTTSCEEEEEECT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe---CCCCceeEEEcC-----CCcEEEEeccCCcceEEEEcCC
Confidence 34678999999986666667889999998654221111 123456666654 55655554332 2 36666766
Q ss_pred CCeEEEEecC-CCccEEEEEECCCcEEEEEe-CCCeEEEEeCCCCee-eEeccCCcceeeEEEeccCceeEEEEcCCCce
Q psy2671 328 LSQCVRVLTS-HTRSVTCIRWGGSGLIYSAS-QDRTIKVWRASDGVM-CRTLEGHAHWVNTLALSTDYLMRVEATSTGGF 404 (573)
Q Consensus 328 ~~~~~~~~~~-h~~~v~~~~~~~~~~l~s~s-~d~~i~vw~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~ 404 (573)
+++....... .......++...++.++... .++.|..+|...+.. +....+... .
T Consensus 104 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~--------~-------------- 161 (306)
T 2p4o_A 104 DGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLA--------R-------------- 161 (306)
T ss_dssp TSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGS--------C--------------
T ss_pred CCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccc--------c--------------
Confidence 6654332211 11222334434445545444 577777777654321 100000000 0
Q ss_pred eeCCCCchhhhhhhhhheeeeCCCCc-EEEEEeCCCeEEEEcCCC-Cccc-eeeeccccccEEEEEECCCCCEEEEeeCC
Q psy2671 405 KYDPANPEESSKHALAKYQAQCPEGE-KLVSGSDDFTLFLWNPEK-EKKS-LARMTGHQQLINCVEFSPDGRIIASASFD 481 (573)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~lwd~~~-~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~d 481 (573)
..... ........++++. ++++-...+.|..+++.. +... ...+. .......++++++|+++++....
T Consensus 162 -~~~~~-------~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~ 232 (306)
T 2p4o_A 162 -SNSES-------VFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIY 232 (306)
T ss_dssp -SSTTC-------CSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTT
T ss_pred -ccccC-------CCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCC
Confidence 00000 0000000124454 445555678899998764 2110 11111 01224568999999988887778
Q ss_pred CcEEEEeCCCCeEEE--eecCCcceEEEEEEC---CCCCEEEEEeCCC
Q psy2671 482 KSIKLWDGRIGKFIT--TLRGHVQAVYMVAWS---SDSRLLVSGSADS 524 (573)
Q Consensus 482 g~i~lwd~~~~~~~~--~~~~h~~~v~~v~~s---~dg~~las~s~D~ 524 (573)
+.|.++|.. ++... .+.......++++|. ||++.|+.++..+
T Consensus 233 ~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 233 NSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred CeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 899999975 65532 333333567899999 8988777665543
No 256
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.34 E-value=1.4e-05 Score=80.85 Aligned_cols=250 Identities=9% Similarity=0.048 Sum_probs=139.4
Q ss_pred CCCEE-EEEeCCCcEEEEECCCCeEEEEecC-CCccEEEEEE-C-CC-cEEEEEe------------------CCCeEEE
Q psy2671 308 QCRRF-ASSGKDGAIRIWDVILSQCVRVLTS-HTRSVTCIRW-G-GS-GLIYSAS------------------QDRTIKV 364 (573)
Q Consensus 308 ~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~~~~~-~-~~-~~l~s~s------------------~d~~i~v 364 (573)
+++++ ++...++.|.+.|+.+.++.+.+.- .......+++ . ++ +.++.++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 34443 4445566799999999988875542 2245677776 2 44 4677764 2457888
Q ss_pred EeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCcee--e---CCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK--Y---DPANPEESSKHALAKYQAQCPEGEKLVSGSDDF 439 (573)
Q Consensus 365 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 439 (573)
.|..+.+....+.--. .-..++++++.........+.... . ..............+.....++|+.... +
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i----~ 254 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL----N 254 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE----T
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE----C
Confidence 8888876665543211 123455666654444333221100 0 0000000000000000001123433322 5
Q ss_pred eEEEEcCCC--CccceeeeccccccEEEEEECCCCCEEEEee-CCCcEEEEeCCCCe------------EEEeecCCcce
Q psy2671 440 TLFLWNPEK--EKKSLARMTGHQQLINCVEFSPDGRIIASAS-FDKSIKLWDGRIGK------------FITTLRGHVQA 504 (573)
Q Consensus 440 ~i~lwd~~~--~~~~~~~~~~h~~~v~~v~~sp~g~~las~s-~dg~i~lwd~~~~~------------~~~~~~~h~~~ 504 (573)
.|.+.|.++ ....+..+.- .....++.++|||+++++++ .+.+|.++|..+.+ ....+.-- ..
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~g 332 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-LG 332 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-SC
T ss_pred cEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-CC
Confidence 599999886 3221233322 23457899999999776654 78899999988653 22333221 34
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEeCCc----------ccccccccCcCCCE-----EEEEEccCCCEEEEeeC
Q psy2671 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKT----------KKIEQDLPGHGDEV-----YAVDWAPDGEKVASGGK 564 (573)
Q Consensus 505 v~~v~~s~dg~~las~s~D~~v~vwd~~~----------~~~~~~l~~h~~~v-----~~~~~s~d~~~l~s~~~ 564 (573)
-..++|+|||...++.-.|+.|.+||+.+ .+.+..+.-|-.+- .++..+|||++|++...
T Consensus 333 P~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 333 PLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred cceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 67889999994444566899999999976 33444554443321 12345899999988643
No 257
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.32 E-value=0.00027 Score=67.49 Aligned_cols=235 Identities=9% Similarity=0.067 Sum_probs=130.2
Q ss_pred EEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccccc----------C--------CcccEEEEEecccccCCCCCEEE
Q psy2671 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMR----------G--------HKQWITALSWEPFHLNHQCRRFA 313 (573)
Q Consensus 252 V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~----------~--------h~~~v~~~~~~~~~~~~~~~~l~ 313 (573)
-.+++|+++|+.++++..++.|..|+..++........ + ......++++.+ .++ .|.
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~----~~g-~l~ 95 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL----QNN-QLY 95 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET----TTT-EEE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcC----CCC-cEE
Confidence 45688999998788888899999999876543210000 0 012356666543 123 444
Q ss_pred EEeCCCcEEEEECCCCeEEEEecC-----CCccEEEEEECC-CcEEEEEeCC------------------CeEEEEeCCC
Q psy2671 314 SSGKDGAIRIWDVILSQCVRVLTS-----HTRSVTCIRWGG-SGLIYSASQD------------------RTIKVWRASD 369 (573)
Q Consensus 314 s~~~dg~v~iwd~~~~~~~~~~~~-----h~~~v~~~~~~~-~~~l~s~s~d------------------~~i~vw~~~~ 369 (573)
.+...+.+..+|...+.. ..+.. .......+++.+ ++.++.+... +.|..++..+
T Consensus 96 v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 96 IVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 454455588888765432 22211 112356788887 7766665432 4455555544
Q ss_pred CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE-EEeCCCeEEEEcCCC
Q psy2671 370 GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV-SGSDDFTLFLWNPEK 448 (573)
Q Consensus 370 ~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sg~~dg~i~lwd~~~ 448 (573)
+.......+ ....+. .+..+++..|. +-...+.|..|++..
T Consensus 175 ~~~~~~~~~-~~~p~g-------------------------------------ia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 175 KETTLLLKE-LHVPGG-------------------------------------AEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp TEEEEEEEE-ESCCCE-------------------------------------EEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred CEEEEeccC-CccCcc-------------------------------------eEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 432111000 000011 12346666544 445568888888764
Q ss_pred Ccc-ceeeeccccccEEEEEECCCCCEEEEeeC----------CCcEEEEeCCCCeEEEeecCC----cceEEEEEECCC
Q psy2671 449 EKK-SLARMTGHQQLINCVEFSPDGRIIASASF----------DKSIKLWDGRIGKFITTLRGH----VQAVYMVAWSSD 513 (573)
Q Consensus 449 ~~~-~~~~~~~h~~~v~~v~~sp~g~~las~s~----------dg~i~lwd~~~~~~~~~~~~h----~~~v~~v~~s~d 513 (573)
... ....+..... ...++++++|++.++... .+.|..+|.. ++.+..+... ...+..+++ .+
T Consensus 217 ~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~ 293 (322)
T 2fp8_A 217 PKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HD 293 (322)
T ss_dssp TTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ET
T ss_pred CcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eC
Confidence 211 1111111122 678999999997776544 4678888874 6666655432 234556666 46
Q ss_pred CCEEEEEeCCCcEEEEeCCc
Q psy2671 514 SRLLVSGSADSTLKVWNMKT 533 (573)
Q Consensus 514 g~~las~s~D~~v~vwd~~~ 533 (573)
+++.++....+.|..+++..
T Consensus 294 g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 294 GLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TEEEEECSSCSEEEEEEC--
T ss_pred CEEEEeecCCCceEEEeccc
Confidence 66666666778899888753
No 258
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.30 E-value=0.00012 Score=75.95 Aligned_cols=303 Identities=11% Similarity=0.075 Sum_probs=151.7
Q ss_pred CCeEEEEee-CCeEEEEEC-CCCceecccccCCcccEE------EEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE
Q psy2671 261 SKQLVSGCK-NGVIHAWDS-STGKQIGQPMRGHKQWIT------ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332 (573)
Q Consensus 261 g~~l~sgs~-dg~i~vwd~-~~~~~~~~~~~~h~~~v~------~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 332 (573)
+..++.++. ++.|.-+|. .+|+.+.+........+. .+...| ...+.++..++.|+.+..+|..+++.+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~v~~~dg~l~alD~~tG~~~ 138 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGL---AYGAGQIVKKQANGHLLALDAKTGKIN 138 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCC---EEETTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCcccccccccccccccc---EEECCEEEEEeCCCEEEEEECCCCCEE
Confidence 445666666 788888888 888776442211110000 000001 012356777888999999999999877
Q ss_pred EEecCCC--c--cEEE-EEECCCcEEEEEeC------CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEc--
Q psy2671 333 RVLTSHT--R--SVTC-IRWGGSGLIYSASQ------DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT-- 399 (573)
Q Consensus 333 ~~~~~h~--~--~v~~-~~~~~~~~l~s~s~------d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~-- 399 (573)
....... . .+.+ ... .++.++.++. ++.|..+|..+|+..-.+........ ....+.........
T Consensus 139 W~~~~~~~~~~~~~~~~P~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~-~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 139 WEVEVCDPKVGSTLTQAPFV-AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDS-VRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEEECCCGGGTCBCCSCCEE-ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHH-HTBCTTTTTTCGGGCC
T ss_pred EEecCCCCCccceeccCCEE-ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccc-cccCcccccccccccc
Confidence 6543211 0 1111 111 1456777665 78999999999887644322110000 00000000000000
Q ss_pred -CCCceeeCCCCchhhhhhh-hhheeeeCCCCcEEEEEeC------------C----CeEEEEcCCCCccceeeecc-c-
Q psy2671 400 -STGGFKYDPANPEESSKHA-LAKYQAQCPEGEKLVSGSD------------D----FTLFLWNPEKEKKSLARMTG-H- 459 (573)
Q Consensus 400 -~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~sg~~------------d----g~i~lwd~~~~~~~~~~~~~-h- 459 (573)
..+...|.. . ....... .-......+....+..+.. | +.|..+|..+++..-..... |
T Consensus 217 ~~~g~~~w~~-~-~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d 294 (571)
T 2ad6_A 217 FGLGTKTWEG-D-AWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHD 294 (571)
T ss_dssp SSHHHHTSST-T-GGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTC
T ss_pred cccccccCcc-c-ceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCc
Confidence 000000000 0 0000000 0000011122233333332 1 35777777766543322221 1
Q ss_pred -------cccEEEEEECCCCC---EEEEeeCCCcEEEEeCCCCeEEEeecCCc-------------ceE-----------
Q psy2671 460 -------QQLINCVEFSPDGR---IIASASFDKSIKLWDGRIGKFITTLRGHV-------------QAV----------- 505 (573)
Q Consensus 460 -------~~~v~~v~~sp~g~---~las~s~dg~i~lwd~~~~~~~~~~~~h~-------------~~v----------- 505 (573)
..++ -+...++|+ .++.++.+|.+.++|..+|+.+...+... .++
T Consensus 295 ~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~ 373 (571)
T 2ad6_A 295 EWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDH 373 (571)
T ss_dssp SSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTC
T ss_pred ccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCC
Confidence 1222 123335774 67788999999999999998876543211 111
Q ss_pred ---------------EEEEECCCCCEEEEEe-------------------------------------CCCcEEEEeCCc
Q psy2671 506 ---------------YMVAWSSDSRLLVSGS-------------------------------------ADSTLKVWNMKT 533 (573)
Q Consensus 506 ---------------~~v~~s~dg~~las~s-------------------------------------~D~~v~vwd~~~ 533 (573)
..++++|+..+|+..+ .++.|..||+.+
T Consensus 374 ~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~t 453 (571)
T 2ad6_A 374 KGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTT 453 (571)
T ss_dssp CEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTT
T ss_pred CceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCC
Confidence 1357888877776653 357899999999
Q ss_pred ccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 534 ~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
++.+-..+.. ..+.+......+..++.++.|+.|+.|+
T Consensus 454 G~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D 491 (571)
T 2ad6_A 454 GKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALD 491 (571)
T ss_dssp CCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred CCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEE
Confidence 8876554321 2222222333456777788899888875
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.30 E-value=0.00056 Score=70.90 Aligned_cols=83 Identities=16% Similarity=0.148 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceE-EEEEECCCCC
Q psy2671 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV-YMVAWSSDSR 515 (573)
Q Consensus 437 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v-~~v~~s~dg~ 515 (573)
.+|.+.-||+.+++..-....+. .+..-.....+.+++.|+.||.++.||.++|+.+..++...... .-+.+..+|+
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~ 541 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHL--PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE 541 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESS--CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred CcceEEEEECCCCCEEEEecCCC--CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence 36889999998876543322221 11111112245678889999999999999999998876432211 1245556776
Q ss_pred -EEEEEe
Q psy2671 516 -LLVSGS 521 (573)
Q Consensus 516 -~las~s 521 (573)
|+++.+
T Consensus 542 qYv~~~~ 548 (582)
T 1flg_A 542 QYLGVTV 548 (582)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 444443
No 260
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.29 E-value=0.00013 Score=77.28 Aligned_cols=272 Identities=11% Similarity=0.087 Sum_probs=141.8
Q ss_pred EEEEcC-CCCeEEEEeeCC-----------eEEEEECCCCceecc-cc-cCCcccEEEEEecccccCCCCCEEEEEeC-C
Q psy2671 254 CIAWSP-DSKQLVSGCKNG-----------VIHAWDSSTGKQIGQ-PM-RGHKQWITALSWEPFHLNHQCRRFASSGK-D 318 (573)
Q Consensus 254 ~v~~s~-dg~~l~sgs~dg-----------~i~vwd~~~~~~~~~-~~-~~h~~~v~~~~~~~~~~~~~~~~l~s~~~-d 318 (573)
++++.+ +++.++.|+.+. .+.+||+.+++-... .+ ..+.....+.++ ..+++.++.||. +
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~-----~~~g~lyv~GG~~~ 264 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISM-----DGNGQIVVTGGNDA 264 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEE-----CTTSCEEEECSSST
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccC-----CCCCCEEEeCCCCC
Confidence 456677 888888877543 588999987653211 01 111111112221 135678888884 5
Q ss_pred CcEEEEECCCCeEEEEecCCCcc-EEEEEECCCc-EEEEEe-CC-----CeEEEEeCCCCeeeEeccCCcceeeEEEecc
Q psy2671 319 GAIRIWDVILSQCVRVLTSHTRS-VTCIRWGGSG-LIYSAS-QD-----RTIKVWRASDGVMCRTLEGHAHWVNTLALST 390 (573)
Q Consensus 319 g~v~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~-~l~s~s-~d-----~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~ 390 (573)
..+.+||..+.+....-..+... -.+++..+++ +++.|+ .+ ..+.+||..++.....-......
T Consensus 265 ~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p-------- 336 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNP-------- 336 (656)
T ss_dssp TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGG--------
T ss_pred CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccc--------
Confidence 68999999877655432222211 1233333334 555565 34 46778887765432110000000
Q ss_pred CceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC---------CeEEEEcCCCCccceeeeccc--
Q psy2671 391 DYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD---------FTLFLWNPEKEKKSLARMTGH-- 459 (573)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d---------g~i~lwd~~~~~~~~~~~~~h-- 459 (573)
..... .. .....++..++.|+.+ ..+..||+.+..... ....+
T Consensus 337 -----------------~~~~~---~~-----~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~-~~~~~~~ 390 (656)
T 1k3i_A 337 -----------------MLTAD---KQ-----GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK-SAGKRQS 390 (656)
T ss_dssp -----------------GCCCC---TT-----GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEE-EEEECEE
T ss_pred -----------------ccccc---cc-----ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceee-cCCcccc
Confidence 00000 00 0001223344444433 356778876543211 11111
Q ss_pred -------cccEEEEEEC-CCCCEEEEeeCCC-----------cEEEEeCCCCeEEEee--cCCcceE-EEEEECCCCCEE
Q psy2671 460 -------QQLINCVEFS-PDGRIIASASFDK-----------SIKLWDGRIGKFITTL--RGHVQAV-YMVAWSSDSRLL 517 (573)
Q Consensus 460 -------~~~v~~v~~s-p~g~~las~s~dg-----------~i~lwd~~~~~~~~~~--~~h~~~v-~~v~~s~dg~~l 517 (573)
...-.++.|. .++++++.|+.++ .+.+||..+.+..... ..+.... .+++..|+|+++
T Consensus 391 ~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~ 470 (656)
T 1k3i_A 391 NRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTF 470 (656)
T ss_dssp TTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEE
T ss_pred ccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEE
Confidence 1122445554 3788899988643 6888998876654332 2122222 344667899999
Q ss_pred EEEeCC-----------CcEEEEeCCcccc--cccccCcCCCEEEEEEccCCCEEEEeeC
Q psy2671 518 VSGSAD-----------STLKVWNMKTKKI--EQDLPGHGDEVYAVDWAPDGEKVASGGK 564 (573)
Q Consensus 518 as~s~D-----------~~v~vwd~~~~~~--~~~l~~h~~~v~~~~~s~d~~~l~s~~~ 564 (573)
+.|+.+ ..+.+||..+.+- +..+........+..+.||++.++.||.
T Consensus 471 v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 471 ITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred EECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 999864 4689999877542 2222222222234556799999999885
No 261
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.26 E-value=0.00015 Score=73.35 Aligned_cols=131 Identities=13% Similarity=0.123 Sum_probs=84.8
Q ss_pred CCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCC-----------------------------------
Q psy2671 438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK----------------------------------- 482 (573)
Q Consensus 438 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg----------------------------------- 482 (573)
++.+-+.|.++.+.......+- .-..++++|+|+++++.+.+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred CceEEEEECCCCeEEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 3467777877643322222221 234578899999988887653
Q ss_pred ---cEEEEeCCC--CeE-EEeecCCcceEEEEEECCCCCEEEEEe-CCCcEEEEeCCccc------------ccccccCc
Q psy2671 483 ---SIKLWDGRI--GKF-ITTLRGHVQAVYMVAWSSDSRLLVSGS-ADSTLKVWNMKTKK------------IEQDLPGH 543 (573)
Q Consensus 483 ---~i~lwd~~~--~~~-~~~~~~h~~~v~~v~~s~dg~~las~s-~D~~v~vwd~~~~~------------~~~~l~~h 543 (573)
.|.+.|.++ ++. +..+..- ....++.++|||+++++++ .+.+|.++|+.+.+ ....+.-
T Consensus 252 ~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v- 329 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL- 329 (595)
T ss_dssp EETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-
T ss_pred EECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-
Confidence 366677766 433 3333221 1234689999999877665 68899999998653 1222322
Q ss_pred CCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 544 GDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 544 ~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
...-..++|+|||...++.-.|+.|..|+
T Consensus 330 G~gP~h~aF~~dG~aY~t~~ldsqV~kwd 358 (595)
T 1fwx_A 330 GLGPLHTAFDGRGNAYTSLFLDSQVVKWN 358 (595)
T ss_dssp CSCEEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CCCcceEEECCCCeEEEEEecCCcEEEEE
Confidence 23567899999995456778899999896
No 262
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.25 E-value=0.00036 Score=62.38 Aligned_cols=180 Identities=10% Similarity=0.100 Sum_probs=113.0
Q ss_pred EEEEEECCCcEEEEEeCC--CeEEEEeCCCCeeeEeccCCcce-eeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671 342 VTCIRWGGSGLIYSASQD--RTIKVWRASDGVMCRTLEGHAHW-VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418 (573)
Q Consensus 342 v~~~~~~~~~~l~s~s~d--~~i~vw~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (573)
...+.|.++..+.+.+.+ ..|+.+|+.+++........... -..+++.
T Consensus 23 tqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~----------------------------- 73 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW----------------------------- 73 (243)
T ss_dssp EEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-----------------------------
T ss_pred cccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-----------------------------
Confidence 456777764444555554 48999999999887655322110 0111111
Q ss_pred hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee
Q psy2671 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL 498 (573)
Q Consensus 419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~ 498 (573)
.+...+....++.+.+||..+.+. +.++..... ...+.++++.|..+..++.|.++|..+.+.+..+
T Consensus 74 ---------~~~ly~ltw~~~~v~v~D~~tl~~-~~ti~~~~~---Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I 140 (243)
T 3mbr_X 74 ---------RDRLIQLTWRNHEGFVYDLATLTP-RARFRYPGE---GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSI 140 (243)
T ss_dssp ---------TTEEEEEESSSSEEEEEETTTTEE-EEEEECSSC---CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEE
T ss_pred ---------CCEEEEEEeeCCEEEEEECCcCcE-EEEEeCCCC---ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEE
Confidence 123444556788999999877543 333322111 1233456766666666889999999999887766
Q ss_pred cCCc-----ceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccccc-------------CcCCCEEEEEEccCCCEEE
Q psy2671 499 RGHV-----QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP-------------GHGDEVYAVDWAPDGEKVA 560 (573)
Q Consensus 499 ~~h~-----~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~-------------~h~~~v~~~~~s~d~~~l~ 560 (573)
.-.. ..++.+.+. +|+..|..-.+..|.+-|.++++.+..+. .-.+-.+.++|+|+++.|.
T Consensus 141 ~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lf 219 (243)
T 3mbr_X 141 KVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLF 219 (243)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEE
T ss_pred EEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEE
Confidence 4321 245666665 67666555567899999999988654332 1123568999999988877
Q ss_pred EeeC
Q psy2671 561 SGGK 564 (573)
Q Consensus 561 s~~~ 564 (573)
..|+
T Consensus 220 VTGK 223 (243)
T 3mbr_X 220 VTGK 223 (243)
T ss_dssp EEET
T ss_pred EECC
Confidence 7664
No 263
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.22 E-value=0.00024 Score=64.08 Aligned_cols=172 Identities=17% Similarity=0.186 Sum_probs=111.9
Q ss_pred CCEEEEEeCCC--cEEEEECCCCeEEEEecCCCcc-EEEEEECCCcEEEEEe-CCCeEEEEeCCCCeeeEeccCCcceee
Q psy2671 309 CRRFASSGKDG--AIRIWDVILSQCVRVLTSHTRS-VTCIRWGGSGLIYSAS-QDRTIKVWRASDGVMCRTLEGHAHWVN 384 (573)
Q Consensus 309 ~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~l~s~s-~d~~i~vw~~~~~~~~~~~~~~~~~v~ 384 (573)
+..+.+.|.+| .|+.+|+.+++.+..+...... -..+...++ .++... .++.+.++|..+.+.+.++.-.... .
T Consensus 53 ~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~-~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG-~ 130 (262)
T 3nol_A 53 GYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKD-KIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG-W 130 (262)
T ss_dssp TEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETT-EEEEEESSSSEEEEEETTTCCEEEEEECSSCC-C
T ss_pred CEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCC-EEEEEEeeCCEEEEEECccCcEEEEEECCCCc-e
Confidence 45677777776 8999999999888776543322 123444444 455444 5889999999988877665421100 0
Q ss_pred EEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec---ccc-
Q psy2671 385 TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT---GHQ- 460 (573)
Q Consensus 385 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~---~h~- 460 (573)
..++++..|+....++.|.++|+.+.+..-.... +..
T Consensus 131 ---------------------------------------glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~ 171 (262)
T 3nol_A 131 ---------------------------------------GLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEEL 171 (262)
T ss_dssp ---------------------------------------CEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEEC
T ss_pred ---------------------------------------EEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccc
Confidence 1123455566655678899999987543222111 111
Q ss_pred ccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC------------cceEEEEEECCCCCEEEEEeC
Q psy2671 461 QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH------------VQAVYMVAWSSDSRLLVSGSA 522 (573)
Q Consensus 461 ~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h------------~~~v~~v~~s~dg~~las~s~ 522 (573)
..++.+.+. +|++.|..-.+..|.+.|.++++.+..+... ..-.+.+||+|+++.|...++
T Consensus 172 ~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 172 PELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp CCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 335567776 7877776667889999999999988776431 124588999999887777764
No 264
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.16 E-value=0.0053 Score=57.92 Aligned_cols=230 Identities=11% Similarity=0.057 Sum_probs=122.7
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC-C-eEEEEECCCCceec
Q psy2671 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN-G-VIHAWDSSTGKQIG 285 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d-g-~i~vwd~~~~~~~~ 285 (573)
.....++|+|+|+.+++-..++.|..||..+... .... .......++++++|+.+++.... + .|..++..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~-~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ-IHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE-EEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceE-EEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 4567899999998777766889999999876432 2222 22457899999999855544332 2 47677777765321
Q ss_pred ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE-EEEe---------cCCCccEEEEEECCCcEEEE
Q psy2671 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-VRVL---------TSHTRSVTCIRWGGSGLIYS 355 (573)
Q Consensus 286 ~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-~~~~---------~~h~~~v~~~~~~~~~~l~s 355 (573)
............++. ...+..+++...++.|..+|...++. +... ...-.....+...+...+++
T Consensus 110 ~~~~~~~~~~~g~~~-----~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~ 184 (306)
T 2p4o_A 110 LLTLPDAIFLNGITP-----LSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVS 184 (306)
T ss_dssp EEECTTCSCEEEEEE-----SSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEE
T ss_pred EEeCCCccccCcccc-----cCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEE
Confidence 100011111222221 11223445444688888888765421 1110 01112234442222223444
Q ss_pred EeCCCeEEEEeCCC-CeeeEeccCCcceeeEEE--eccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE
Q psy2671 356 ASQDRTIKVWRASD-GVMCRTLEGHAHWVNTLA--LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL 432 (573)
Q Consensus 356 ~s~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~--~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 432 (573)
-+..+.|..++... +... . ...+. ..++ -.+..++|.+.
T Consensus 185 d~~~~~I~~~~~~~~g~~~-----~---~~~~~~~~~P~------------------------------gi~vd~dG~l~ 226 (306)
T 2p4o_A 185 NTEKMLLLRIPVDSTDKPG-----E---PEIFVEQTNID------------------------------DFAFDVEGNLY 226 (306)
T ss_dssp ETTTTEEEEEEBCTTSCBC-----C---CEEEEESCCCS------------------------------SEEEBTTCCEE
T ss_pred eCCCCEEEEEEeCCCCCCC-----c---cEEEeccCCCC------------------------------CeEECCCCCEE
Confidence 45677888888764 2210 0 00000 0000 11233667777
Q ss_pred EEEeCCCeEEEEcCCCCccceeeeccccccEEEEEEC---CCCCEEEEeeCCC
Q psy2671 433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFS---PDGRIIASASFDK 482 (573)
Q Consensus 433 ~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~s---p~g~~las~s~dg 482 (573)
++....+.|.+++.......+..+...-...++++|. |+++.|..++..+
T Consensus 227 va~~~~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 227 GATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred EEeCCCCeEEEECCCCCEEEEeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 7777778899999753221122222222457899998 8887776665443
No 265
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.14 E-value=0.00051 Score=62.00 Aligned_cols=171 Identities=17% Similarity=0.139 Sum_probs=112.5
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEecCCCc-cEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEE
Q psy2671 309 CRRFASSGKDGAIRIWDVILSQCVRVLTSHTR-SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLA 387 (573)
Q Consensus 309 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~ 387 (573)
+..+.+.+.+|.|+.+|+.+++.++.+ .... --..+...++......-.++.+.+||..+.+.+.++.-... -.
T Consensus 65 ~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e-Gw--- 139 (268)
T 3nok_A 65 GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE-GW--- 139 (268)
T ss_dssp TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSC-CC---
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCc-ee---
Confidence 356788899999999999998877665 2221 12335555554444455688999999999888766542110 00
Q ss_pred eccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec--ccc---cc
Q psy2671 388 LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT--GHQ---QL 462 (573)
Q Consensus 388 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~--~h~---~~ 462 (573)
..++++..|+.+..++.|.++|+++.+. ..++. .+. ..
T Consensus 140 ------------------------------------GLt~Dg~~L~vSdGs~~l~~iDp~T~~v-~~~I~V~~~g~~v~~ 182 (268)
T 3nok_A 140 ------------------------------------GLCYWNGKLVRSDGGTMLTFHEPDGFAL-VGAVQVKLRGQPVEL 182 (268)
T ss_dssp ------------------------------------CEEEETTEEEEECSSSEEEEECTTTCCE-EEEEECEETTEECCC
T ss_pred ------------------------------------EEecCCCEEEEECCCCEEEEEcCCCCeE-EEEEEeCCCCccccc
Confidence 1123456676666788999999887643 22221 111 13
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC-------------cceEEEEEECCCCCEEEEEeC
Q psy2671 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH-------------VQAVYMVAWSSDSRLLVSGSA 522 (573)
Q Consensus 463 v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h-------------~~~v~~v~~s~dg~~las~s~ 522 (573)
++.+.|. +|++.|....+..|.+.|.++++.+..+... ..-.+.+|++|+++.|...++
T Consensus 183 lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 183 INELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred ccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 5667776 7777766667889999999999988766432 124688999998776655553
No 266
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.13 E-value=0.0004 Score=71.91 Aligned_cols=113 Identities=10% Similarity=0.023 Sum_probs=63.6
Q ss_pred CCeEEEEee-CCeEEEEEC-CCCceecccccCCccc----------EEEEEecccccCCCCCEEEEEeCCCcEEEEECCC
Q psy2671 261 SKQLVSGCK-NGVIHAWDS-STGKQIGQPMRGHKQW----------ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328 (573)
Q Consensus 261 g~~l~sgs~-dg~i~vwd~-~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 328 (573)
+..|+.++. ++.|.-+|. .+|+.+.+........ ...+.+.|.. ....+++..++.|+.+.-+|..+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~-g~~~~rV~v~t~dg~l~AlDa~T 140 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGD-GKTPALILKTQLDGNVAALNAET 140 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCC-SSSCCEEEEECTTSEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecC-CcceeEEEEEcCCCEEEEEECCC
Confidence 445666666 788888888 7887764422111100 0011111100 00112377788899999999999
Q ss_pred CeEEEEecCCCc----cEEE-EEECCCcEEEEEe------CCCeEEEEeCCCCeeeEe
Q psy2671 329 SQCVRVLTSHTR----SVTC-IRWGGSGLIYSAS------QDRTIKVWRASDGVMCRT 375 (573)
Q Consensus 329 ~~~~~~~~~h~~----~v~~-~~~~~~~~l~s~s------~d~~i~vw~~~~~~~~~~ 375 (573)
++.+-....... .+.+ ... .++.++.++ .++.|.-+|..+|+.+=.
T Consensus 141 G~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 141 GETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred CCEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence 987765432210 1111 111 135666665 389999999999876543
No 267
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.05 E-value=0.0019 Score=61.58 Aligned_cols=237 Identities=14% Similarity=0.136 Sum_probs=122.8
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEec-C------------------CCccEEEEEECC-CcEEEEEeCCCeEEEEeC
Q psy2671 308 QCRRFASSGKDGAIRIWDVILSQCVRVLT-S------------------HTRSVTCIRWGG-SGLIYSASQDRTIKVWRA 367 (573)
Q Consensus 308 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~------------------h~~~v~~~~~~~-~~~l~s~s~d~~i~vw~~ 367 (573)
+++.+.++..++.|..|+...+....... . ....+..+++.+ ++.|+.+...+.|..++.
T Consensus 29 ~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d~ 108 (322)
T 2fp8_A 29 TNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGS 108 (322)
T ss_dssp TCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEEECT
T ss_pred CCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEEEeC
Confidence 45556677778889989876654322110 0 012467888886 788888877777888887
Q ss_pred CCCeeeEec---cCC-cceeeEEEecc-CceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEE
Q psy2671 368 SDGVMCRTL---EGH-AHWVNTLALST-DYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLF 442 (573)
Q Consensus 368 ~~~~~~~~~---~~~-~~~v~~~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~ 442 (573)
.++...... .+. ....+.+++.+ +..+-+...... +.... .... ++.+..++.+.
T Consensus 109 ~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~---~~~~~----~~~~-------------~~~~~~~g~v~ 168 (322)
T 2fp8_A 109 EGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTL---YDDRG----VQQI-------------MDTSDKTGRLI 168 (322)
T ss_dssp TCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSS---CCTTC----HHHH-------------HHHTCCCEEEE
T ss_pred CCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccc---ccccc----ccee-------------hcccCCCceEE
Confidence 655321111 110 11223344443 322111111000 00000 0000 00001235677
Q ss_pred EEcCCCCccceeeeccccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCCC---e--EEEeecCCcceEEEEEECCCCCE
Q psy2671 443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRIG---K--FITTLRGHVQAVYMVAWSSDSRL 516 (573)
Q Consensus 443 lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~~---~--~~~~~~~h~~~v~~v~~s~dg~~ 516 (573)
.||..+.... .+...-...+.++++|+|+.|..+ +.++.|..|+.... . ....+. . ...+++.++|++
T Consensus 169 ~~d~~~~~~~--~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~---g-P~gi~~d~~G~l 242 (322)
T 2fp8_A 169 KYDPSTKETT--LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP---N-PGNIKRNADGHF 242 (322)
T ss_dssp EEETTTTEEE--EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECS---S-EEEEEECTTSCE
T ss_pred EEeCCCCEEE--EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCC---C-CCCeEECCCCCE
Confidence 7776543211 111111234679999999866555 56688999987642 1 122222 2 567899999987
Q ss_pred EEEEeC----------CCcEEEEeCCcccccccccCc----CCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 517 LVSGSA----------DSTLKVWNMKTKKIEQDLPGH----GDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 517 las~s~----------D~~v~vwd~~~~~~~~~l~~h----~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
.++... .+.|..+|.. ++.+..+... -..+.++.+ .+++..++....+.|..++
T Consensus 243 ~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~ 310 (322)
T 2fp8_A 243 WVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILV 310 (322)
T ss_dssp EEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEE
T ss_pred EEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEe
Confidence 666544 4668888874 5544433322 134566666 4555555555566666553
No 268
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.01 E-value=0.011 Score=56.18 Aligned_cols=140 Identities=15% Similarity=0.181 Sum_probs=80.0
Q ss_pred CCCcEEEEEeCCCeEEEEcCC-CCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC----C
Q psy2671 427 PEGEKLVSGSDDFTLFLWNPE-KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG----H 501 (573)
Q Consensus 427 ~~~~~l~sg~~dg~i~lwd~~-~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~----h 501 (573)
+++.+++.+...+..+-+|.. ..-..+ .......+..+++++++++++. +.+|.+++.+...++....+.. +
T Consensus 172 ~~~~~~~~g~~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~ 248 (327)
T 2xbg_A 172 PSGEYVAVSSRGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRN 248 (327)
T ss_dssp TTSCEEEEETTSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSC
T ss_pred CCCcEEEEECCCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccC
Confidence 445566555444444444421 111111 1233456889999999987654 4578887774332433332221 2
Q ss_pred cceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccccc---CcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 502 VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP---GHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 502 ~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~---~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
...+.++++.+++.+++++. ++.| ++....++.=..+. .+...++++.|.+++ .++.++.+|.|.-++
T Consensus 249 ~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 249 SVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYV 319 (327)
T ss_dssp CSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEEC
T ss_pred CcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEc
Confidence 23588999999888777654 6766 34444444322222 233567889888655 466777888876554
No 269
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.00 E-value=0.0022 Score=57.32 Aligned_cols=181 Identities=12% Similarity=0.110 Sum_probs=113.8
Q ss_pred cEEEEEecccccCCCCCEEEEEeCCC--cEEEEECCCCeEEEEecCCCcc-EEEEEECCCcEEEEEeCCCeEEEEeCCCC
Q psy2671 294 WITALSWEPFHLNHQCRRFASSGKDG--AIRIWDVILSQCVRVLTSHTRS-VTCIRWGGSGLIYSASQDRTIKVWRASDG 370 (573)
Q Consensus 294 ~v~~~~~~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~l~s~s~d~~i~vw~~~~~ 370 (573)
...++.|.+ +..+.+.|.+| .|+.+|+.+++.++.+...... -..+...++......-.++.+.++|..+.
T Consensus 22 ftqGL~~~~------~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl 95 (243)
T 3mbr_X 22 FTEGLFYLR------GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATL 95 (243)
T ss_dssp CEEEEEEET------TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTT
T ss_pred ccccEEEEC------CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcC
Confidence 345565543 34567777754 8999999999888776533221 12344444333344456889999999998
Q ss_pred eeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc
Q psy2671 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK 450 (573)
Q Consensus 371 ~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~ 450 (573)
+.+.++.-... -.. .++++..|..+..++.|.++|+++.+
T Consensus 96 ~~~~ti~~~~~-Gwg---------------------------------------lt~dg~~L~vSdgs~~l~~iDp~t~~ 135 (243)
T 3mbr_X 96 TPRARFRYPGE-GWA---------------------------------------LTSDDSHLYMSDGTAVIRKLDPDTLQ 135 (243)
T ss_dssp EEEEEEECSSC-CCE---------------------------------------EEECSSCEEEECSSSEEEEECTTTCC
T ss_pred cEEEEEeCCCC-ceE---------------------------------------EeeCCCEEEEECCCCeEEEEeCCCCe
Confidence 87766542110 001 11335555555668899999998754
Q ss_pred cceeeec--ccc---ccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC-------------cceEEEEEECC
Q psy2671 451 KSLARMT--GHQ---QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH-------------VQAVYMVAWSS 512 (573)
Q Consensus 451 ~~~~~~~--~h~---~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h-------------~~~v~~v~~s~ 512 (573)
.. .++. .+. ..++.+.+. +|++.|..-.+..|.+.|.++++.+..+... ..-.+.+|++|
T Consensus 136 ~~-~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~ 213 (243)
T 3mbr_X 136 QV-GSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDA 213 (243)
T ss_dssp EE-EEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEET
T ss_pred EE-EEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcC
Confidence 32 2221 111 234566665 6777766656789999999999987765421 12468899999
Q ss_pred CCCEEEEEeC
Q psy2671 513 DSRLLVSGSA 522 (573)
Q Consensus 513 dg~~las~s~ 522 (573)
+++.|...++
T Consensus 214 ~~~~lfVTGK 223 (243)
T 3mbr_X 214 EHDRLFVTGK 223 (243)
T ss_dssp TTTEEEEEET
T ss_pred CCCEEEEECC
Confidence 8877666654
No 270
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.95 E-value=0.00069 Score=72.84 Aligned_cols=156 Identities=12% Similarity=0.106 Sum_probs=90.2
Q ss_pred CCCC-cEEEEEEc-CCCCeEEEEeC-C----CeEEEEECCCC-eeeEE-ecCCCCcEEEEEEcCCCCeEEEEeeC-----
Q psy2671 205 GHAE-AVISVKFS-PNGRSLASGSG-D----TTVRFWDVTTQ-TPLFK-CEGHKHWVLCIAWSPDSKQLVSGCKN----- 270 (573)
Q Consensus 205 gh~~-~V~~~~fs-p~g~~las~s~-d----~~i~iwd~~~~-~~~~~-~~~h~~~V~~v~~s~dg~~l~sgs~d----- 270 (573)
+|.- .+...+|| |||++||-+.. + .+|+++|+.++ +.+.. +. .....++|+|||+.|+....+
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCC
Confidence 4543 67889999 99998885532 2 35999999988 63211 11 112467899999988877765
Q ss_pred CeEEEEECCCCceecccc-c-CCcccEEEEEecccccCCCCCEEEEEeC---CCcEEEEECCCC--eE--EEEecCCCcc
Q psy2671 271 GVIHAWDSSTGKQIGQPM-R-GHKQWITALSWEPFHLNHQCRRFASSGK---DGAIRIWDVILS--QC--VRVLTSHTRS 341 (573)
Q Consensus 271 g~i~vwd~~~~~~~~~~~-~-~h~~~v~~~~~~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~--~~--~~~~~~h~~~ 341 (573)
..|.++++.++......+ . ........+.|+| ++++|+..+. ...|.++|+..+ .. ..........
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp-----Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~ 321 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA-----DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGV 321 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT-----TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTC
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECC-----CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCc
Confidence 368888887654211111 1 2223445566654 6777765542 345778888764 23 2233334445
Q ss_pred EEEEEECCCcEE-EEEeCC--C--eEEEEeCC
Q psy2671 342 VTCIRWGGSGLI-YSASQD--R--TIKVWRAS 368 (573)
Q Consensus 342 v~~~~~~~~~~l-~s~s~d--~--~i~vw~~~ 368 (573)
...+.|...+.+ +....+ + .|..+++.
T Consensus 322 ~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 322 RYDVQMHGTSHLVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp CEEEEEETTTEEEEEECTTTCTTCEEEEEETT
T ss_pred eEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCC
Confidence 556665444444 444333 2 34444544
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.87 E-value=0.0053 Score=55.65 Aligned_cols=202 Identities=10% Similarity=0.094 Sum_probs=124.6
Q ss_pred cCCCccccEEEEEEcCCCCeeEE-eeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671 105 SMPGHAEAVISVKFSPNGRSLAS-GSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183 (573)
Q Consensus 105 ~~~gH~~~V~~l~~s~~~~~lat-~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (573)
.++|-.+.++++++.|++..|.+ ...++.|..-|.. ++.+...
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i----------------------------------- 64 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTI----------------------------------- 64 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEE-----------------------------------
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEE-----------------------------------
Confidence 45677678999999998765554 5667777777765 4322110
Q ss_pred EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee---eEEe------cCCCCcEEE
Q psy2671 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP---LFKC------EGHKHWVLC 254 (573)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~---~~~~------~~h~~~V~~ 254 (573)
.+.|. ...-.+++.+++.++++.-.++.+.++++..... +... ...+.....
T Consensus 65 ------------------~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EG 125 (255)
T 3qqz_A 65 ------------------PLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEG 125 (255)
T ss_dssp ------------------ECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEE
T ss_pred ------------------ecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcce
Confidence 01121 2345677788887767666778888888765432 1111 123456789
Q ss_pred EEEcCCCCeEEEEeeCCeEEEEECCC---Cceeccc------ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEE
Q psy2671 255 IAWSPDSKQLVSGCKNGVIHAWDSST---GKQIGQP------MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325 (573)
Q Consensus 255 v~~s~dg~~l~sgs~dg~i~vwd~~~---~~~~~~~------~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd 325 (573)
|+|+|+++.|+++.......+|.... +..+... -..+...+.+++++|. .++.++.+.....+..+|
T Consensus 126 LA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~----tg~lliLS~~s~~L~~~d 201 (255)
T 3qqz_A 126 LAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ----KNTLLVLSHESRALQEVT 201 (255)
T ss_dssp EEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETT----TTEEEEEETTTTEEEEEC
T ss_pred EEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCC----CCeEEEEECCCCeEEEEc
Confidence 99999998888877765555555431 1111000 0112234677888773 456777777888888888
Q ss_pred CCCCeEEEEecCC---------CccEEEEEECCCcEEEEEeCCCeEEEEe
Q psy2671 326 VILSQCVRVLTSH---------TRSVTCIRWGGSGLIYSASQDRTIKVWR 366 (573)
Q Consensus 326 ~~~~~~~~~~~~h---------~~~v~~~~~~~~~~l~s~s~d~~i~vw~ 366 (573)
... +.+..+.-. -..-..+++.++|.+|..+..+.+..+.
T Consensus 202 ~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 202 LVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFT 250 (255)
T ss_dssp TTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEE
T ss_pred CCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEE
Confidence 654 444443221 1245789999999888888877665554
No 272
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.78 E-value=0.052 Score=56.57 Aligned_cols=332 Identities=11% Similarity=0.068 Sum_probs=169.8
Q ss_pred EEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee--CCeEEEEECCCCceecc
Q psy2671 210 VISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK--NGVIHAWDSSTGKQIGQ 286 (573)
Q Consensus 210 V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~--dg~i~vwd~~~~~~~~~ 286 (573)
...+++.+.+..| .+-...+.|.+.++............-..-..|++.|....|+...+ .+.|...++...... .
T Consensus 82 P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~ 160 (628)
T 4a0p_A 82 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-T 160 (628)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-E
T ss_pred cceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-E
Confidence 4567888765555 44456688999998654332222233344689999986666766553 467777777644321 1
Q ss_pred cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEe
Q psy2671 287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWR 366 (573)
Q Consensus 287 ~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~ 366 (573)
+...-.+..++++.+. .++.+.+-...+.|...|+..... ..+.........+++..+..+++-...+.|...|
T Consensus 161 -l~~~~~~P~GlalD~~----~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 161 -LVPNVGRANGLTIDYA----KRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERAN 234 (628)
T ss_dssp -EECSCSSEEEEEEETT----TTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred -EECCCCCcceEEEccc----cCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEECCEEEEecCCCCEEEEEE
Confidence 1112334566666542 234455556677888888765433 3333333445677776654455555578888888
Q ss_pred CCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCch--hhhhh---hh-hheeeeCCCC-----------
Q psy2671 367 ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE--ESSKH---AL-AKYQAQCPEG----------- 429 (573)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~-~~~~~~~~~~----------- 429 (573)
..+|.....+.........+.+...... . ..++.... ..... .. ..+...||.|
T Consensus 235 k~tg~~~~~l~~~~~~p~~i~v~~~~~q-------~--~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~ 305 (628)
T 4a0p_A 235 KTSGQNRTIIQGHLDYVMDILVFHSSRQ-------S--GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCS 305 (628)
T ss_dssp TTTCCSCEEEECSCCSCCEEEEECGGGS-------C--CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEE
T ss_pred CCCCCceEEEecCCCCcceeeeeeeccc-------c--cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCc
Confidence 7777544444333222222222111000 0 00000000 00000 00 1122223332
Q ss_pred ---cEEEEEeCCCeEEEEcCCCCccceeeec-cccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCeEEEeecC----
Q psy2671 430 ---EKLVSGSDDFTLFLWNPEKEKKSLARMT-GHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRIGKFITTLRG---- 500 (573)
Q Consensus 430 ---~~l~sg~~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~~~~~~~~~~---- 500 (573)
.+|+.+ ....|+-..+......-..+. ..-..+..|+|++.+..|..+ ...+.|+.++.........+..
T Consensus 306 ~~~~~Ll~s-~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~ 384 (628)
T 4a0p_A 306 APTTFLLFS-QKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPS 384 (628)
T ss_dssp CCSSEEEEE-ETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-----
T ss_pred cccceeeee-ccceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEccccc
Confidence 233332 234555555433211111111 112447889999866655554 4567788887654332222322
Q ss_pred --CcceEEEEEECCCCCEEE-EEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCE
Q psy2671 501 --HVQAVYMVAWSSDSRLLV-SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK 558 (573)
Q Consensus 501 --h~~~v~~v~~s~dg~~la-s~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~ 558 (573)
.......+++...++.|. +-+..+.|.+.++........+....+...++++.|...+
T Consensus 385 ~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ 445 (628)
T 4a0p_A 385 QNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGY 445 (628)
T ss_dssp ---CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEEEEEEECTTCCEEEEEEETTTTE
T ss_pred ccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeEEEEEeCCCCceeeEEEecCCCe
Confidence 223577889988766554 5566788999988643221112223345778888884333
No 273
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.76 E-value=0.03 Score=53.25 Aligned_cols=148 Identities=11% Similarity=0.055 Sum_probs=75.7
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEe---cCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCcee
Q psy2671 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC---EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~---~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~ 284 (573)
..+.++.|+| +..++ ++.++.|.. ....++.-... ..+...+..+.+.+++..++.+ .+|.|.. ....|+.-
T Consensus 80 ~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW 154 (327)
T 2xbg_A 80 YRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNW 154 (327)
T ss_dssp CEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSE
T ss_pred ccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCC
Confidence 4577888886 44444 455564443 22223221111 1233457788887777655554 4554322 12234322
Q ss_pred cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEE-EEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEE
Q psy2671 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR-IWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIK 363 (573)
Q Consensus 285 ~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~-iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~ 363 (573)
.....+....+..+.+.+ +++.++.+ .+|.+. -+|-.-..-...-......+..+.+.+++.++.++.+|.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~-----~~~~~~~g-~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~ 228 (327)
T 2xbg_A 155 QALVQEAIGVMRNLNRSP-----SGEYVAVS-SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIA 228 (327)
T ss_dssp EEEECSCCCCEEEEEECT-----TSCEEEEE-TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEE
T ss_pred EEeecCCCcceEEEEEcC-----CCcEEEEE-CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeCCceEE
Confidence 222233445677777654 34555544 444443 34421111111122345567888888888888888888877
Q ss_pred EEe
Q psy2671 364 VWR 366 (573)
Q Consensus 364 vw~ 366 (573)
+.+
T Consensus 229 ~s~ 231 (327)
T 2xbg_A 229 FSD 231 (327)
T ss_dssp EEE
T ss_pred Eec
Confidence 653
No 274
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.75 E-value=0.022 Score=55.56 Aligned_cols=241 Identities=13% Similarity=0.003 Sum_probs=124.1
Q ss_pred EEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy2671 254 CIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVR 333 (573)
Q Consensus 254 ~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 333 (573)
|.+..++ .+|+.+. ...|+..++..+... .... ......++.|.+. .+..+.+-...+.|+.+++.......
T Consensus 81 C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~-~~~~-~~~~~~gl~~d~~----~~~ly~~D~~~~~I~r~~~~g~~~~~ 152 (386)
T 3v65_B 81 CKALGPE-PVLLFAN-RIDIRQVLPHRSEYT-LLLN-NLENAIALDFHHR----RELVFWSDVTLDRILRANLNGSNVEE 152 (386)
T ss_dssp EEECSSC-CEEEEEC-BSCEEEECTTSCCCE-EEEC-SCSCEEEEEEETT----TTEEEEEETTTTEEEEEETTSCCEEE
T ss_pred ECCcccc-ceeEeec-CccceeeccCCCcEE-EEec-CCCccEEEEEecC----CCeEEEEeCCCCcEEEEecCCCCcEE
Confidence 4444443 3444333 345777777654321 1111 2234677777652 33455666667888888887655433
Q ss_pred EecCCCccEEEEEECC-Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCc
Q psy2671 334 VLTSHTRSVTCIRWGG-SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP 411 (573)
Q Consensus 334 ~~~~h~~~v~~~~~~~-~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 411 (573)
.+.........+++.. .+ ++++-...+.|.+.++........+.......+.+++.
T Consensus 153 ~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavd---------------------- 210 (386)
T 3v65_B 153 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALH---------------------- 210 (386)
T ss_dssp EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEE----------------------
T ss_pred EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEE----------------------
Confidence 3332223344555553 33 44455556777777765332211111111112222222
Q ss_pred hhhhhhhhhheeeeCCC-CcEEEEEeCC-CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEe-eCCCcEEEEe
Q psy2671 412 EESSKHALAKYQAQCPE-GEKLVSGSDD-FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA-SFDKSIKLWD 488 (573)
Q Consensus 412 ~~~~~~~~~~~~~~~~~-~~~l~sg~~d-g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd 488 (573)
|. +.+.++-... +.|..+++...... ......-...+.|+|+|++..|..+ +..+.|..+|
T Consensus 211 ---------------p~~g~ly~td~~~~~~I~r~~~dG~~~~-~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 211 ---------------PMEGTIYWTDWGNTPRIEASSMDGSGRR-IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp ---------------TTTTEEEEEECSSSCEEEEEETTSCSCE-EEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred ---------------cCCCeEEEeccCCCCEEEEEeCCCCCcE-EEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 22 2333343333 56777666533211 1111222346889999866655544 4567899998
Q ss_pred CCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccccc
Q psy2671 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP 541 (573)
Q Consensus 489 ~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~ 541 (573)
.........+.........+++ ..+.++++....+.|..++..+++....+.
T Consensus 275 ~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 275 LDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 7643322233322334566777 345566666677889888866666544443
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.71 E-value=0.023 Score=55.43 Aligned_cols=161 Identities=13% Similarity=-0.006 Sum_probs=97.6
Q ss_pred EEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee-C-CeEEEEECCCCceeccc
Q psy2671 211 ISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK-N-GVIHAWDSSTGKQIGQP 287 (573)
Q Consensus 211 ~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~-d-g~i~vwd~~~~~~~~~~ 287 (573)
..+++.+.+..| ++-...+.|.+.++...............-..+++.|++..|+.+.. . +.|...++...... ..
T Consensus 162 ~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~ 240 (386)
T 3v65_B 162 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-II 240 (386)
T ss_dssp CCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EE
T ss_pred cEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE-EE
Confidence 457788755544 55556778888887654433333333345689999997777665544 3 67888887643221 11
Q ss_pred ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeC
Q psy2671 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRA 367 (573)
Q Consensus 288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~ 367 (573)
....-.+..++++.|. .++.+++-+..+.|..+++........+.........+++..+..+++-...+.|..++.
T Consensus 241 ~~~~~~~PnGlavd~~----~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 241 ADTHLFWPNGLTIDYA----GRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANK 316 (386)
T ss_dssp ECSSCSCEEEEEEEGG----GTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred EECCCCCeeeEEEeCC----CCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEEC
Confidence 1222335677887653 334556666678888888764433333333344566777755555666667788888886
Q ss_pred CCCeeeEec
Q psy2671 368 SDGVMCRTL 376 (573)
Q Consensus 368 ~~~~~~~~~ 376 (573)
.+|.....+
T Consensus 317 ~~G~~~~~i 325 (386)
T 3v65_B 317 FTGKNQEII 325 (386)
T ss_dssp TTCCSCEEE
T ss_pred CCCcceEEE
Confidence 666554444
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.69 E-value=0.041 Score=52.79 Aligned_cols=226 Identities=12% Similarity=-0.036 Sum_probs=115.6
Q ss_pred CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-
Q psy2671 271 GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG- 349 (573)
Q Consensus 271 g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~- 349 (573)
..|+..++...... ....+ .....++.|.+. .+..+.+-...+.|+.+++........+.........+++..
T Consensus 53 ~~I~~i~~~g~~~~-~~~~~-~~~~~~l~~d~~----~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~ 126 (349)
T 3v64_C 53 IDIRQVLPHRSEYT-LLLNN-LENAIALDFHHR----RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWV 126 (349)
T ss_dssp SCEEEECTTSCCEE-EEECS-CSCEEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETT
T ss_pred cceEEEeCCCCeeE-EeecC-CCceEEEEEecc----ccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecC
Confidence 34666666543321 11112 233567777652 334555555677888888776543333332223345566653
Q ss_pred Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671 350 SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE 428 (573)
Q Consensus 350 ~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (573)
.+ ++++-...+.|.+.++................+.+++.+. .
T Consensus 127 ~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~------------------------------------~ 170 (349)
T 3v64_C 127 HDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPM------------------------------------E 170 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETT------------------------------------T
T ss_pred CCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecC------------------------------------c
Confidence 33 4455556678888876533221111111111223333211 2
Q ss_pred CcEEEEEeCC-CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCeEEEeecCCcceEE
Q psy2671 429 GEKLVSGSDD-FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRIGKFITTLRGHVQAVY 506 (573)
Q Consensus 429 ~~~l~sg~~d-g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~~~~~~~~~~h~~~v~ 506 (573)
+.+..+-... +.|...++...... ......-...+.++++|++..|..+ +..+.|..+|.........+........
T Consensus 171 g~ly~td~~~~~~I~r~~~dG~~~~-~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~ 249 (349)
T 3v64_C 171 GTIYWTDWGNTPRIEASSMDGSGRR-IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPF 249 (349)
T ss_dssp TEEEEEECSSSCEEEEEETTSCSCE-ESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEE
T ss_pred CeEEEeccCCCCEEEEEeCCCCCcE-EEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCce
Confidence 3334444444 66777766532211 1111122346889999876665554 4567899998764332222332233456
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCcccccccc
Q psy2671 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL 540 (573)
Q Consensus 507 ~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l 540 (573)
.+++ ..+.+.++-...+.|..++..+++....+
T Consensus 250 giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 250 AITV-FEDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp EEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEE-ECCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 6777 34555556666778888886566544433
No 277
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.64 E-value=0.14 Score=57.42 Aligned_cols=331 Identities=12% Similarity=0.087 Sum_probs=161.4
Q ss_pred eEEEEECCCCeeeEEecCC-CCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEeccccc-CC
Q psy2671 230 TVRFWDVTTQTPLFKCEGH-KHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL-NH 307 (573)
Q Consensus 230 ~i~iwd~~~~~~~~~~~~h-~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~ 307 (573)
.|++.+......+..+... ...|.+.+.+ +.+++.++ ++.+.++++..+.........-...|.++.+.|..- ..
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~ 569 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNG 569 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTT
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcc
Confidence 4556665444444444432 2345555554 34666664 678888877655321111111234688988776421 12
Q ss_pred CCCEEEEEeC-CCcEEEEECCCCeEEEEecC-CCccEEEE---EECCCcEEEEEeCCCeEEEEeC--CCCeeeEe---cc
Q psy2671 308 QCRRFASSGK-DGAIRIWDVILSQCVRVLTS-HTRSVTCI---RWGGSGLIYSASQDRTIKVWRA--SDGVMCRT---LE 377 (573)
Q Consensus 308 ~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~-h~~~v~~~---~~~~~~~l~s~s~d~~i~vw~~--~~~~~~~~---~~ 377 (573)
.++.++.|.+ |++++|+++...+.+....- ......++ .+.+.-.++.|-.||.+..+.+ .+|.+... .-
T Consensus 570 ~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~L 649 (1158)
T 3ei3_A 570 LSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTL 649 (1158)
T ss_dssp CCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEEC
T ss_pred cccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEc
Confidence 3568888887 99999999987655543221 11122333 3333346888889998865544 34443321 11
Q ss_pred CCcceeeEEEeccCceeEEE-EcC--------CCceeeCCCCchhhhhhhhhheee-eCCCCcEEEEEeCCCeEEEEcCC
Q psy2671 378 GHAHWVNTLALSTDYLMRVE-ATS--------TGGFKYDPANPEESSKHALAKYQA-QCPEGEKLVSGSDDFTLFLWNPE 447 (573)
Q Consensus 378 ~~~~~v~~~~~s~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~sg~~dg~i~lwd~~ 447 (573)
|. .++.-..+.......+. ..+ .+.+.+.+..... ......+.. .+|+ -++. ..++.+++..+.
T Consensus 650 G~-~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l~~~~--v~~~~~F~se~~~~--g~v~-~~~~~LrI~~i~ 723 (1158)
T 3ei3_A 650 GT-QPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKE--VNYMCPLNSDGYPD--SLAL-ANNSTLTIGTID 723 (1158)
T ss_dssp CS-SCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEEEBSSSC--CCEEEEECCSSSTT--EEEE-ECSSCEEEEEEC
T ss_pred CC-CceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEeccChHH--hceEeccCcccCCC--cEEE-EcCCceEEEEec
Confidence 21 12211111111111111 111 1222222111100 000000110 1233 3333 334568887654
Q ss_pred CCccceeeeccccccEEEEEECCCCCEEEEeeCC----------------------------------------------
Q psy2671 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFD---------------------------------------------- 481 (573)
Q Consensus 448 ~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d---------------------------------------------- 481 (573)
+......+...-...+..++++|+.+.++.+..+
T Consensus 724 ~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 803 (1158)
T 3ei3_A 724 EIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEE 803 (1158)
T ss_dssp CSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCE
T ss_pred ccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCc
Confidence 3322111111123457788888877765543311
Q ss_pred ---CcEEEEeCCCCeEEEeecC-CcceEEEEE---ECCC-CCEEEEEe----------CCCcEEEEeCCccccccc-ccC
Q psy2671 482 ---KSIKLWDGRIGKFITTLRG-HVQAVYMVA---WSSD-SRLLVSGS----------ADSTLKVWNMKTKKIEQD-LPG 542 (573)
Q Consensus 482 ---g~i~lwd~~~~~~~~~~~~-h~~~v~~v~---~s~d-g~~las~s----------~D~~v~vwd~~~~~~~~~-l~~ 542 (573)
+.|++.|..+.+.+..+.- ....+.+++ |..+ ..+|+.|. ..|.|++|++..+++... -..
T Consensus 804 ~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~ 883 (1158)
T 3ei3_A 804 VEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKE 883 (1158)
T ss_dssp EEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEE
T ss_pred eeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEE
Confidence 2367788777776654432 123344443 4333 46888776 347799999875443211 112
Q ss_pred cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 543 HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 543 h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
..+.|+++.=- +|+.|++. .++|++|+
T Consensus 884 v~g~v~al~~~-~g~Lla~i--g~~l~vy~ 910 (1158)
T 3ei3_A 884 VKGAVYSMVEF-NGKLLASI--NSTVRLYE 910 (1158)
T ss_dssp ESSCEEEEEEE-TTEEEEEE--TTEEEEEE
T ss_pred cCCcCEEEeee-CCEEEEEc--CCEEEEEE
Confidence 35678888633 45444433 46788775
No 278
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.58 E-value=0.06 Score=51.65 Aligned_cols=162 Identities=13% Similarity=-0.010 Sum_probs=96.9
Q ss_pred EEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee-C-CeEEEEECCCCceecc
Q psy2671 210 VISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK-N-GVIHAWDSSTGKQIGQ 286 (573)
Q Consensus 210 V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~-d-g~i~vwd~~~~~~~~~ 286 (573)
...+++.+.+..| ++-...+.|.+.++...............-..+++.|.+..|+.... . +.|...++...... .
T Consensus 118 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~ 196 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-I 196 (349)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-E
T ss_pred ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-E
Confidence 3577888755544 55556788999998765433333333345689999997666665443 4 77888887643321 1
Q ss_pred cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEe
Q psy2671 287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWR 366 (573)
Q Consensus 287 ~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~ 366 (573)
.....-.+..++++.|. .++.+.+-+..+.|..+++........+.........+++..+..+++-...+.|..++
T Consensus 197 ~~~~~~~~PnGla~d~~----~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 197 IADTHLFWPNGLTIDYA----GRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp SCCSSCSCEEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred EEECCCCCcceEEEeCC----CCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEE
Confidence 12222345677887652 34455666667788888876543333333334455667774444555555677888887
Q ss_pred CCCCeeeEec
Q psy2671 367 ASDGVMCRTL 376 (573)
Q Consensus 367 ~~~~~~~~~~ 376 (573)
..+|.....+
T Consensus 273 ~~~G~~~~~i 282 (349)
T 3v64_C 273 KFTGKNQEII 282 (349)
T ss_dssp TTTCCSCEEE
T ss_pred ccCCCccEEe
Confidence 6666544443
No 279
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.44 E-value=0.082 Score=49.90 Aligned_cols=229 Identities=11% Similarity=0.057 Sum_probs=121.3
Q ss_pred CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE-eeCCeEEEEECCCC---ceecccccCCcccEEEEEeccc
Q psy2671 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG-CKNGVIHAWDSSTG---KQIGQPMRGHKQWITALSWEPF 303 (573)
Q Consensus 228 d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg-s~dg~i~vwd~~~~---~~~~~~~~~h~~~v~~~~~~~~ 303 (573)
...|+..|+.+........ .......++|++++..|+.+ ...+.|..+++... ..........-....++++.+.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 3468888887765433333 23457899999876666554 45689999998751 1111111111122344554321
Q ss_pred ccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-CcEEEEEeCC--CeEEEEeCCCCeeeEec-cCC
Q psy2671 304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQD--RTIKVWRASDGVMCRTL-EGH 379 (573)
Q Consensus 304 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~d--~~i~vw~~~~~~~~~~~-~~~ 379 (573)
.++.+++-...+.|.+.++........+.........+++.+ .+.++.+... +.|...++. |.....+ ...
T Consensus 88 ----~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~ 162 (316)
T 1ijq_A 88 ----HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTEN 162 (316)
T ss_dssp ----TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSS
T ss_pred ----CCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECC
Confidence 234556666778888888765443333333334567888875 5566655543 567666654 2222211 111
Q ss_pred cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcc-ceeeecc
Q psy2671 380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK-SLARMTG 458 (573)
Q Consensus 380 ~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~-~~~~~~~ 458 (573)
..+-+.++++++ .+.+.++-+..+.|..+|+..... .+....+
T Consensus 163 ~~~P~gla~d~~------------------------------------~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~ 206 (316)
T 1ijq_A 163 IQWPNGITLDLL------------------------------------SGRLYWVDSKLHSISSIDVNGGNRKTILEDEK 206 (316)
T ss_dssp CSCEEEEEEETT------------------------------------TTEEEEEETTTTEEEEEETTSCSCEEEEECTT
T ss_pred CCCceEEEEecc------------------------------------CCEEEEEECCCCeEEEEecCCCceEEEeecCC
Confidence 222333443321 123344444556788887754221 1111111
Q ss_pred ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR 499 (573)
Q Consensus 459 h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~ 499 (573)
.-.....+++. .+.++++-...+.|..+|..+++.+..+.
T Consensus 207 ~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 207 RLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp TTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred ccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 11234567775 45666666677889999987776555543
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.37 E-value=0.099 Score=49.32 Aligned_cols=230 Identities=10% Similarity=0.029 Sum_probs=118.4
Q ss_pred CCeEEEEECCCCe-eeEEecCCCCcEEEEEEcCCCCeEE-EEeeCCeEEEEECCCCceecccccCCcccEEEEEeccccc
Q psy2671 228 DTTVRFWDVTTQT-PLFKCEGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL 305 (573)
Q Consensus 228 d~~i~iwd~~~~~-~~~~~~~h~~~V~~v~~s~dg~~l~-sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 305 (573)
...|+..++.... .............+++|.+.+..|+ +-...+.|..+++..+..........-....++++.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~--- 88 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW--- 88 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEET---
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEc---
Confidence 4678888887653 1111111112467899998655555 4455688999998765321111111111233444432
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-CcEEEEEeC--CCeEEEEeCCCCeeeEeccCCcce
Q psy2671 306 NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQ--DRTIKVWRASDGVMCRTLEGHAHW 382 (573)
Q Consensus 306 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~--d~~i~vw~~~~~~~~~~~~~~~~~ 382 (573)
..++.+.+-...+.|.++++........+.........+++.+ .+.++.+.. .+.|...++..............+
T Consensus 89 -~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~ 167 (318)
T 3sov_A 89 -LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYW 167 (318)
T ss_dssp -TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSC
T ss_pred -CCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 1334556656677888888765433333333344567788875 356665553 466666665422111111111122
Q ss_pred eeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecccccc
Q psy2671 383 VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL 462 (573)
Q Consensus 383 v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~ 462 (573)
-+.++++++ .+.+.++-+..+.|..+++....... ...+....
T Consensus 168 Pnglavd~~------------------------------------~~~lY~aD~~~~~I~~~d~dG~~~~~-~~~~~~~~ 210 (318)
T 3sov_A 168 PNGLTLDYE------------------------------------EQKLYWADAKLNFIHKSNLDGTNRQA-VVKGSLPH 210 (318)
T ss_dssp EEEEEEETT------------------------------------TTEEEEEETTTTEEEEEETTSCSCEE-EECSCCSC
T ss_pred ccEEEEecc------------------------------------CCEEEEEECCCCEEEEEcCCCCceEE-EecCCCCC
Confidence 233443321 23334444556677777765322111 11112233
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR 499 (573)
Q Consensus 463 v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~ 499 (573)
...+++.. +.++.+-...+.|..+|..+|+....+.
T Consensus 211 P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 211 PFALTLFE-DILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred ceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 45677753 4555666677889999987776555443
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.35 E-value=0.13 Score=50.27 Aligned_cols=165 Identities=12% Similarity=-0.038 Sum_probs=101.3
Q ss_pred CcEEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee--CCeEEEEECCCCcee
Q psy2671 208 EAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK--NGVIHAWDSSTGKQI 284 (573)
Q Consensus 208 ~~V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~--dg~i~vwd~~~~~~~ 284 (573)
.....+++.+.+..| ++-...+.|.+.++..................|++.|.+.+|+...+ .+.|...++......
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 238 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence 346788888854444 55556789999998765443333333345689999997777766553 367888887643321
Q ss_pred cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC--CCccEEEEEECCCcEEEEEeCCCeE
Q psy2671 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS--HTRSVTCIRWGGSGLIYSASQDRTI 362 (573)
Q Consensus 285 ~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~l~s~s~d~~i 362 (573)
......-.+..++++.+. .++.+.+-+..+.|..+|+........... .......++...+..+++-...+.|
T Consensus 239 -~~~~~~l~~P~glavd~~----~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V 313 (400)
T 3p5b_L 239 -SLVTENIQWPNGITLDLL----SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAI 313 (400)
T ss_dssp -EEECSSCSCEEEEEEETT----TTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSE
T ss_pred -EEEECCCCceEEEEEEeC----CCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeE
Confidence 111222245677777652 234455556677888888865433333322 2344566777556666777777888
Q ss_pred EEEeCCCCeeeEecc
Q psy2671 363 KVWRASDGVMCRTLE 377 (573)
Q Consensus 363 ~vw~~~~~~~~~~~~ 377 (573)
..++..+|.....+.
T Consensus 314 ~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 314 FSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEESSSCCCCEEEE
T ss_pred EEEEcCCCCceEEEe
Confidence 888877776554443
No 282
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.35 E-value=0.067 Score=52.97 Aligned_cols=152 Identities=13% Similarity=0.095 Sum_probs=84.5
Q ss_pred cEEEEEEcC-CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC-C----eEEEEECCCCc
Q psy2671 209 AVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN-G----VIHAWDSSTGK 282 (573)
Q Consensus 209 ~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d-g----~i~vwd~~~~~ 282 (573)
....++++| ++..|..+...+.|+.+|+.++...... ........|+|+++|++|+.+... + .+.+.+. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 456789998 4556666655588999999876543332 334457899999999977666542 1 2333333 222
Q ss_pred eec-ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCccEEEEEECCCcE-EEEE-eC
Q psy2671 283 QIG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT-SHTRSVTCIRWGGSGL-IYSA-SQ 358 (573)
Q Consensus 283 ~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~-l~s~-s~ 358 (573)
... ..+. .......+++.| .++..+++-..++.|..++...+....... ........+++++++. ++.+ ..
T Consensus 216 ~~~~~~l~-~~~~p~giavdp----~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 216 FKVITELT-KGQNCNGAETHP----INGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp SCSEEEEE-ECSSCCCEEECT----TTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred eeeeeeec-cCCCceEEEEeC----CCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 110 0000 001122233332 145566666667888888887654422221 1123456788887763 5544 34
Q ss_pred CCeEEEEeC
Q psy2671 359 DRTIKVWRA 367 (573)
Q Consensus 359 d~~i~vw~~ 367 (573)
.+.|..++.
T Consensus 291 ~~~I~~~~~ 299 (430)
T 3tc9_A 291 QHYILRSDY 299 (430)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEeC
Confidence 566666653
No 283
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.35 E-value=0.086 Score=49.75 Aligned_cols=162 Identities=10% Similarity=-0.021 Sum_probs=98.4
Q ss_pred EEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee--CCeEEEEECCCCceecc
Q psy2671 210 VISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK--NGVIHAWDSSTGKQIGQ 286 (573)
Q Consensus 210 V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~--dg~i~vwd~~~~~~~~~ 286 (573)
...+++.+.+..| ++-...+.|.++++...............-..+++.|.+..|+.+.. .+.|...++...... .
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~ 159 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF-I 159 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE-E
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE-E
Confidence 3467888754444 55556789999998754332222233345689999987767766653 578888887643211 1
Q ss_pred cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEe
Q psy2671 287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWR 366 (573)
Q Consensus 287 ~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~ 366 (573)
.....-....++++.|. .++.+.+-+..+.|..+|+..................+++..++.+++-...+.|..++
T Consensus 160 ~~~~~l~~Pnglavd~~----~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~ 235 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYE----EQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACN 235 (318)
T ss_dssp EECSSCSCEEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred EEECCCCCccEEEEecc----CCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEE
Confidence 11122234567777652 33455666667888888886433322333334455677776666677766778898888
Q ss_pred CCCCeeeEec
Q psy2671 367 ASDGVMCRTL 376 (573)
Q Consensus 367 ~~~~~~~~~~ 376 (573)
..+|.....+
T Consensus 236 ~~~G~~~~~i 245 (318)
T 3sov_A 236 KYTGEGLREI 245 (318)
T ss_dssp TTTCCSCEEE
T ss_pred CCCCCceEEE
Confidence 8777654433
No 284
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.24 E-value=0.11 Score=46.95 Aligned_cols=117 Identities=14% Similarity=0.195 Sum_probs=71.0
Q ss_pred ecCCCCcEEEEEEcCCCCeEEE-EeeCCeEEEEECCCCceeccc-ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEE
Q psy2671 245 CEGHKHWVLCIAWSPDSKQLVS-GCKNGVIHAWDSSTGKQIGQP-MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322 (573)
Q Consensus 245 ~~~h~~~V~~v~~s~dg~~l~s-gs~dg~i~vwd~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~ 322 (573)
+.+-...+..++|+|++..|++ ...++.|...|.. ++.+... +.+. .-..++++.+ ++.++++.-.++.+.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~-----~g~~~vs~E~~~~l~ 94 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIG-----DNQFVISDERDYAIY 94 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECS-----TTEEEEEETTTTEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeC-----CCEEEEEECCCCcEE
Confidence 4455567999999998776665 6667889999987 6654332 2222 2345555432 444555555667788
Q ss_pred EEECCCCeE---EEEec------CCCccEEEEEECCCc-EEEEEeCCCeEEEEeCC
Q psy2671 323 IWDVILSQC---VRVLT------SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRAS 368 (573)
Q Consensus 323 iwd~~~~~~---~~~~~------~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~ 368 (573)
++++..... +.... ..+.....++|.+.+ .++++.......+|...
T Consensus 95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 887654331 12211 234557899998765 67777665555565543
No 285
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.18 E-value=0.084 Score=52.30 Aligned_cols=144 Identities=10% Similarity=0.090 Sum_probs=82.2
Q ss_pred CC-CCcEEEEEeCCCeEEEEcCCCCccceee-eccccccEEEEEECCCCCEE-EEeeCCCcEEEEeCC--CCeE--EEee
Q psy2671 426 CP-EGEKLVSGSDDFTLFLWNPEKEKKSLAR-MTGHQQLINCVEFSPDGRII-ASASFDKSIKLWDGR--IGKF--ITTL 498 (573)
Q Consensus 426 ~~-~~~~l~sg~~dg~i~lwd~~~~~~~~~~-~~~h~~~v~~v~~sp~g~~l-as~s~dg~i~lwd~~--~~~~--~~~~ 498 (573)
.| ++.+.++-..++.|+.+++.++...... ..+....-..++|+|+|+.| ++-...+.|+.++.. ++.. ...+
T Consensus 236 d~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ 315 (433)
T 4hw6_A 236 HPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIV 315 (433)
T ss_dssp CTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEE
T ss_pred eCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEE
Confidence 35 5666666667788999988744321111 11112223469999999944 444567889987744 3321 1111
Q ss_pred cC------C---------cceEEEEEE---------CCCCCEEEEEeCCCcEEEEeCCcccccccccC------------
Q psy2671 499 RG------H---------VQAVYMVAW---------SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG------------ 542 (573)
Q Consensus 499 ~~------h---------~~~v~~v~~---------s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~------------ 542 (573)
.+ . ...-..+++ .++|.+.++-...+.|+.++. .+... .+.+
T Consensus 316 ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~-t~~G~g~~~~~G~~dG 393 (433)
T 4hw6_A 316 CGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT-TYAGRGNSREWGYVDG 393 (433)
T ss_dssp EECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE-EEECCCTTCSSCCBCE
T ss_pred EecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE-EEEeCCCCCccccCCC
Confidence 11 1 123467888 777777777677788999985 33221 1111
Q ss_pred ------cCCCEEEEEEc-cCCCEEEEeeCCCcEEEc
Q psy2671 543 ------HGDEVYAVDWA-PDGEKVASGGKDKVLRLW 571 (573)
Q Consensus 543 ------h~~~v~~~~~s-~d~~~l~s~~~d~~i~iw 571 (573)
.-..-..|++. +++..+++=...+.|+..
T Consensus 394 ~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 429 (433)
T 4hw6_A 394 ELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKI 429 (433)
T ss_dssp ETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred ccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEE
Confidence 01236789999 566555554555667654
No 286
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.17 E-value=0.13 Score=50.90 Aligned_cols=234 Identities=10% Similarity=0.084 Sum_probs=120.5
Q ss_pred EEEEEEcCC--CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC---Cc-EEEEE
Q psy2671 252 VLCIAWSPD--SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD---GA-IRIWD 325 (573)
Q Consensus 252 V~~v~~s~d--g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d---g~-v~iwd 325 (573)
-..|+|+|+ +..|+.+...+.|+.+|+.++.... +........++++.+ +++.+++.... .. +...+
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~--~~~~~~~P~giavd~-----dG~lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI--KTTNIGQCADVNFTL-----NGDMVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE--ECCCCSCEEEEEECT-----TCCEEEEECCSCTTSEEEEEEC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE--eecCCCCccEEEECC-----CCCEEEEcCCCCcccceEEEEE
Confidence 467899984 4456666555889999987765432 122233456676654 45544443211 11 21122
Q ss_pred CCCCeE-EEEecCCCccEEEEEECC-CcEEEEEe-CCCeEEEEeCCCCeeeEecc--CCcceeeEEEeccCceeEEEEcC
Q psy2671 326 VILSQC-VRVLTSHTRSVTCIRWGG-SGLIYSAS-QDRTIKVWRASDGVMCRTLE--GHAHWVNTLALSTDYLMRVEATS 400 (573)
Q Consensus 326 ~~~~~~-~~~~~~h~~~v~~~~~~~-~~~l~s~s-~d~~i~vw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~~~~~~ 400 (573)
...... ...+. .......+++.+ ++.|+.+. .++.|..++..++.....+. +...+-..+
T Consensus 214 ~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~i-------------- 278 (433)
T 4hw6_A 214 RASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHI-------------- 278 (433)
T ss_dssp GGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEE--------------
T ss_pred CCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccE--------------
Confidence 111100 01111 112234466666 66666555 46678888877664421110 000011112
Q ss_pred CCceeeCCCCchhhhhhhhhheeeeCCCCc-EEEEEeCCCeEEEEcCCCCccce---eeecc---------------ccc
Q psy2671 401 TGGFKYDPANPEESSKHALAKYQAQCPEGE-KLVSGSDDFTLFLWNPEKEKKSL---ARMTG---------------HQQ 461 (573)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~lwd~~~~~~~~---~~~~~---------------h~~ 461 (573)
+..|++. +.++-...+.|+.+++......+ ..+.+ .-.
T Consensus 279 -----------------------a~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~ 335 (433)
T 4hw6_A 279 -----------------------VWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLW 335 (433)
T ss_dssp -----------------------EECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCS
T ss_pred -----------------------EEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEc
Confidence 2345566 34444455677776543211000 01111 012
Q ss_pred cEEEEEE---------CCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC------------------cceEEEEEEC-CC
Q psy2671 462 LINCVEF---------SPDGRIIASASFDKSIKLWDGRIGKFITTLRGH------------------VQAVYMVAWS-SD 513 (573)
Q Consensus 462 ~v~~v~~---------sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h------------------~~~v~~v~~s-~d 513 (573)
....+++ .++|.++++-...+.|+.++. .|.. .++.+. ...-..|+++ ++
T Consensus 336 ~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~ 413 (433)
T 4hw6_A 336 GPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRV-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKR 413 (433)
T ss_dssp SEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEE-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTT
T ss_pred CCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCE-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCC
Confidence 2567899 788888877777889999985 5543 332211 1235678888 56
Q ss_pred CCEEEEEeCCCcEEEEeCC
Q psy2671 514 SRLLVSGSADSTLKVWNMK 532 (573)
Q Consensus 514 g~~las~s~D~~v~vwd~~ 532 (573)
|.++++-...+.|+.++++
T Consensus 414 g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 414 KCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEecC
Confidence 6666655566778777653
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.14 E-value=0.32 Score=51.96 Aligned_cols=163 Identities=12% Similarity=-0.039 Sum_probs=98.0
Q ss_pred cEEEEEEcCCCCeEE-EEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee--CCeEEEEECCCCceec
Q psy2671 209 AVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK--NGVIHAWDSSTGKQIG 285 (573)
Q Consensus 209 ~V~~~~fsp~g~~la-s~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~--dg~i~vwd~~~~~~~~ 285 (573)
....|++.+.++.|. +-...+.|.+.++..................|++.|.+.+|+.+.+ .+.|.+.++......
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~- 550 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY- 550 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE-
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE-
Confidence 345788888775554 5556789999998765433333334445789999998777766553 267888888644321
Q ss_pred ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC--CCccEEEEEECCCcEEEEEeCCCeEE
Q psy2671 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS--HTRSVTCIRWGGSGLIYSASQDRTIK 363 (573)
Q Consensus 286 ~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~l~s~s~d~~i~ 363 (573)
......-.+..+|++.+. .++++++-...+.|...++........+.. .......+++..+.++++-...+.|.
T Consensus 551 ~lv~~~l~~P~GLavD~~----~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~ 626 (791)
T 3m0c_C 551 SLVTENIQWPNGITLDLL----SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIF 626 (791)
T ss_dssp EEECSSCSCEEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEE
T ss_pred EEEeCCCCCceEEEEecC----CCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEE
Confidence 222222345667776542 334555555667888888765443333332 22344566665554555555667888
Q ss_pred EEeCCCCeeeEec
Q psy2671 364 VWRASDGVMCRTL 376 (573)
Q Consensus 364 vw~~~~~~~~~~~ 376 (573)
..+..+|.....+
T Consensus 627 ~~dk~tG~~~~~l 639 (791)
T 3m0c_C 627 SANRLTGSDVNLL 639 (791)
T ss_dssp EEETTTCCCCEEE
T ss_pred EEeCCCCcceEEe
Confidence 7776666544433
No 288
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.12 E-value=0.23 Score=48.51 Aligned_cols=246 Identities=9% Similarity=0.022 Sum_probs=130.3
Q ss_pred eEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE-eeCCeEEEEECCCCc---eecccccCCcccEE
Q psy2671 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG-CKNGVIHAWDSSTGK---QIGQPMRGHKQWIT 296 (573)
Q Consensus 221 ~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg-s~dg~i~vwd~~~~~---~~~~~~~~h~~~v~ 296 (573)
+|+.+. ...|+..++......... .....+..|+|++.+..|+-+ ...+.|+.+++.... ..............
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 444443 468888888765433333 334567899999876666654 456789989886522 11111111223345
Q ss_pred EEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-CcEEEEEeC--CCeEEEEeCCCCeee
Q psy2671 297 ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQ--DRTIKVWRASDGVMC 373 (573)
Q Consensus 297 ~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~--d~~i~vw~~~~~~~~ 373 (573)
++++.+. .++.+.+-...+.|.+.++........+.........+++.+ .+.|+...+ .+.|...++......
T Consensus 163 glavD~~----~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 163 GLAVDWI----HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 238 (400)
T ss_dssp EEEEETT----TTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred cEEEEec----CCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence 5555431 234556666677888888765544444443444567888876 456655543 356777666532222
Q ss_pred EeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccc-
Q psy2671 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS- 452 (573)
Q Consensus 374 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~- 452 (573)
........+-+.++++++ .+.+.++-...+.|..+|+......
T Consensus 239 ~~~~~~l~~P~glavd~~------------------------------------~~~lY~aD~~~~~I~~~d~dG~~~~~ 282 (400)
T 3p5b_L 239 SLVTENIQWPNGITLDLL------------------------------------SGRLYWVDSKLHSISSIDVNGGNRKT 282 (400)
T ss_dssp EEECSSCSCEEEEEEETT------------------------------------TTEEEEEETTTTEEEEEETTSCCCEE
T ss_pred EEEECCCCceEEEEEEeC------------------------------------CCEEEEEECCCCEEEEEeCCCCccEE
Confidence 222222223344444321 1233334445567777776543221
Q ss_pred eeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEE
Q psy2671 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVA 509 (573)
Q Consensus 453 ~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~ 509 (573)
+....+.-.....|++. .+.++.+-...+.|..+|..+|+.+..+.........++
T Consensus 283 ~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 283 ILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMV 338 (400)
T ss_dssp EEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEE
T ss_pred EEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEE
Confidence 11111111224566763 445666667778899999888876666654333344443
No 289
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.12 E-value=0.11 Score=48.47 Aligned_cols=96 Identities=11% Similarity=0.106 Sum_probs=64.8
Q ss_pred CCeEEEEcCC---CCccce-eeecccc-----------ccEEEEEECCCCCEEEEeeCC-CcEEEEeCCCCeEEEee--c
Q psy2671 438 DFTLFLWNPE---KEKKSL-ARMTGHQ-----------QLINCVEFSPDGRIIASASFD-KSIKLWDGRIGKFITTL--R 499 (573)
Q Consensus 438 dg~i~lwd~~---~~~~~~-~~~~~h~-----------~~v~~v~~sp~g~~las~s~d-g~i~lwd~~~~~~~~~~--~ 499 (573)
+..+..+|+. +++... ..+.+.. ...+.++..++|+..++++.- +.|...+.... .+..+ .
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~ 177 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWE 177 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEEC
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeec
Confidence 5667888877 443321 2222111 247899999999999999988 88888776533 22222 1
Q ss_pred ----CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671 500 ----GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534 (573)
Q Consensus 500 ----~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~ 534 (573)
......+.++++|||..|++....+.+..+|+...
T Consensus 178 ~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 178 SGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 11223567899999998888877999999998743
No 290
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.08 E-value=0.2 Score=47.19 Aligned_cols=109 Identities=12% Similarity=0.152 Sum_probs=70.5
Q ss_pred EEEEEeCCCeEEEEcCCC---C---ccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCC-----CCeEEEeec
Q psy2671 431 KLVSGSDDFTLFLWNPEK---E---KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR-----IGKFITTLR 499 (573)
Q Consensus 431 ~l~sg~~dg~i~lwd~~~---~---~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~-----~~~~~~~~~ 499 (573)
+++....+|.+..|++.. + .+..+.+.- ...+..+.+.+....|..+-.|..|..+|.+ +++.+..+.
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~ 223 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD 223 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBS
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEec
Confidence 577777789998887732 1 122233322 3457888999988899999998777777755 345554442
Q ss_pred -CCc-ceEEEEEE--CCCCC-EEEEEe-CCCcEEEEeCC-cccccccc
Q psy2671 500 -GHV-QAVYMVAW--SSDSR-LLVSGS-ADSTLKVWNMK-TKKIEQDL 540 (573)
Q Consensus 500 -~h~-~~v~~v~~--s~dg~-~las~s-~D~~v~vwd~~-~~~~~~~l 540 (573)
++. ..+..|+. .++++ +|++++ .+++..+||.. +.+.+..+
T Consensus 224 ~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 224 GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 222 24666666 56666 666665 67799999996 44444433
No 291
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.92 E-value=0.28 Score=46.12 Aligned_cols=214 Identities=12% Similarity=-0.009 Sum_probs=112.4
Q ss_pred CCcEEEEECCCCeEEEEecCCCccEEEEEECC-CcEEE-EEeCCCeEEEEeCCCC---ee-eEeccCCcceeeEEEeccC
Q psy2671 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIY-SASQDRTIKVWRASDG---VM-CRTLEGHAHWVNTLALSTD 391 (573)
Q Consensus 318 dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~-s~s~d~~i~vw~~~~~---~~-~~~~~~~~~~v~~~~~s~~ 391 (573)
...|+..|+........+. .......++|.+ .+.++ +-...+.|..+++... .. ...+.........+++..
T Consensus 9 ~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~- 86 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW- 86 (316)
T ss_dssp BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET-
T ss_pred CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEee-
Confidence 4568888887765554443 334567888875 34554 4455688888887641 11 111110001111222110
Q ss_pred ceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCC
Q psy2671 392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD 471 (573)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~ 471 (573)
..+...++-...+.|.+.++..... .......-.....++++|.
T Consensus 87 -----------------------------------~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~iavdp~ 130 (316)
T 1ijq_A 87 -----------------------------------IHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPV 130 (316)
T ss_dssp -----------------------------------TTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETT
T ss_pred -----------------------------------cCCeEEEEECCCCEEEEEeCCCCce-EEEEECCCCCcceEEeCCC
Confidence 1234445555667888887754321 1112222235688999996
Q ss_pred CCEEEEeeC-C-CcEEEEeCCCCeEEEee-cCCcceEEEEEECCCCCEEEEEe-CCCcEEEEeCCccccccccc--CcCC
Q psy2671 472 GRIIASASF-D-KSIKLWDGRIGKFITTL-RGHVQAVYMVAWSSDSRLLVSGS-ADSTLKVWNMKTKKIEQDLP--GHGD 545 (573)
Q Consensus 472 g~~las~s~-d-g~i~lwd~~~~~~~~~~-~~h~~~v~~v~~s~dg~~las~s-~D~~v~vwd~~~~~~~~~l~--~h~~ 545 (573)
+..|..+.. . +.|...+.. |+....+ .........+++++++..|+.+. ..+.|..+|+.......... ..-.
T Consensus 131 ~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~ 209 (316)
T 1ijq_A 131 HGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLA 209 (316)
T ss_dssp TTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTS
T ss_pred CCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccC
Confidence 665554443 2 678888764 3333332 22334577899998877666554 56789999987533211111 1122
Q ss_pred CEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671 546 EVYAVDWAPDGEKVASGGKDKVLRLW 571 (573)
Q Consensus 546 ~v~~~~~s~d~~~l~s~~~d~~i~iw 571 (573)
...++++.. +..+++-...+.|..+
T Consensus 210 ~P~giav~~-~~ly~~d~~~~~V~~~ 234 (316)
T 1ijq_A 210 HPFSLAVFE-DKVFWTDIINEAIFSA 234 (316)
T ss_dssp SEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred CcEEEEEEC-CEEEEEECCCCeEEEE
Confidence 345666643 4444444444555443
No 292
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.88 E-value=0.01 Score=62.98 Aligned_cols=241 Identities=10% Similarity=0.011 Sum_probs=117.6
Q ss_pred CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe-eCCeEEEEECCCC---ceecccccCCcccEEEEEeccc
Q psy2671 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC-KNGVIHAWDSSTG---KQIGQPMRGHKQWITALSWEPF 303 (573)
Q Consensus 228 d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs-~dg~i~vwd~~~~---~~~~~~~~~h~~~v~~~~~~~~ 303 (573)
.+.|+..++.+......... ...+..|+|++.+..|+.+. ..+.|+.+++... ......+...-....++++.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~- 462 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW- 462 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC-
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe-
Confidence 45777778776543322222 23456789998777776654 4578999988651 111111111111223344332
Q ss_pred ccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC-cEEEEEeCC--CeEEEEeCCCCeeeEeccCCc
Q psy2671 304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQD--RTIKVWRASDGVMCRTLEGHA 380 (573)
Q Consensus 304 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d--~~i~vw~~~~~~~~~~~~~~~ 380 (573)
..++++++-...+.|.+.++........+.........+++.+. +.||.+... +.|..+++.............
T Consensus 463 ---~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l 539 (699)
T 1n7d_A 463 ---IHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 539 (699)
T ss_dssp ---SSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSC
T ss_pred ---eCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCC
Confidence 12344555556678888887654433333322234456677653 444444322 455555443211111111111
Q ss_pred ceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC-CcEEEEEeCCCeEEEEcCCCCccc-eeeecc
Q psy2671 381 HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE-GEKLVSGSDDFTLFLWNPEKEKKS-LARMTG 458 (573)
Q Consensus 381 ~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~i~lwd~~~~~~~-~~~~~~ 458 (573)
.+-+.+++ .|. +.+.++-+..+.|..+++...... +....+
T Consensus 540 ~~PnGlav-------------------------------------d~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~ 582 (699)
T 1n7d_A 540 QWPNGITL-------------------------------------DLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK 582 (699)
T ss_dssp SSCCCEEE-------------------------------------CTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSS
T ss_pred CCccEEEE-------------------------------------eccCCEEEEEecCCCeEEEEccCCCceEEEEecCC
Confidence 11122222 232 344455556678888887542211 111101
Q ss_pred ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEEC
Q psy2671 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS 511 (573)
Q Consensus 459 h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s 511 (573)
.-.....|++..+ .++++....+.|..+|..+++.+..+.......+.|++.
T Consensus 583 ~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 583 RLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp SCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBC
T ss_pred cCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEe
Confidence 1111234555544 556666677899999988888777765433233444433
No 293
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.75 E-value=0.023 Score=56.42 Aligned_cols=138 Identities=9% Similarity=0.069 Sum_probs=79.9
Q ss_pred cEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC-CC----cEEEEeCCCCeEE--EeecCCc
Q psy2671 430 EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-DK----SIKLWDGRIGKFI--TTLRGHV 502 (573)
Q Consensus 430 ~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~-dg----~i~lwd~~~~~~~--~~~~~h~ 502 (573)
..|..+...+.|+.+|+.... +..+.........|+|+++|++|..+.. ++ .+...+. .+... ..+.. .
T Consensus 150 g~Lyv~d~~~~I~~id~~~~~--v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~-~ 225 (430)
T 3tc9_A 150 NHLYLVGEQHPTRLIDFEKEY--VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTK-G 225 (430)
T ss_dssp EEEEEEEBTEEEEEEETTTTE--EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE-C
T ss_pred CeEEEEeCCCcEEEEECCCCE--EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeecc-C
Confidence 344444444788888876543 2222223345789999999996555543 22 2333442 22211 12211 1
Q ss_pred ceEEEEEECC-CCCEEEEEeCCCcEEEEeCCccccc--ccccCcCCCEEEEEEccCCCEEEEe-eCCCcEEEcc
Q psy2671 503 QAVYMVAWSS-DSRLLVSGSADSTLKVWNMKTKKIE--QDLPGHGDEVYAVDWAPDGEKVASG-GKDKVLRLWQ 572 (573)
Q Consensus 503 ~~v~~v~~s~-dg~~las~s~D~~v~vwd~~~~~~~--~~l~~h~~~v~~~~~s~d~~~l~s~-~~d~~i~iw~ 572 (573)
.....++++| +|.++++-..++.|..++..++... ..... ...-..++|+|++++|..+ ...+.|..++
T Consensus 226 ~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d~~~~~I~~~~ 298 (430)
T 3tc9_A 226 QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-SGWEFHIQFHPSGNYAYIVVVNQHYILRSD 298 (430)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-SSCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-CCcceeEEEcCCCCEEEEEECCCCEEEEEe
Confidence 2235678999 6776666667788999999866541 12222 1345789999999955444 4556666653
No 294
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.74 E-value=0.39 Score=45.25 Aligned_cols=142 Identities=12% Similarity=0.199 Sum_probs=84.4
Q ss_pred CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCC----CCe--EEEE-ee---CCeEEEEEC--CCCceec
Q psy2671 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD----SKQ--LVSG-CK---NGVIHAWDS--STGKQIG 285 (573)
Q Consensus 218 ~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~d----g~~--l~sg-s~---dg~i~vwd~--~~~~~~~ 285 (573)
...+++....++-+.+||+ +++.+..+.. +.++.|..-|+ |+. ++.+ .+ +++|.+|++ .++. +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 3445666667789999999 7777777654 44666666552 322 3333 33 578999966 3432 21
Q ss_pred cccc-----CCc-ccEEEEEe--cccccCCCCC-EEEEEeCCCcEEEEECC-------CCeEEEEecCCCccEEEEEE-C
Q psy2671 286 QPMR-----GHK-QWITALSW--EPFHLNHQCR-RFASSGKDGAIRIWDVI-------LSQCVRVLTSHTRSVTCIRW-G 348 (573)
Q Consensus 286 ~~~~-----~h~-~~v~~~~~--~~~~~~~~~~-~l~s~~~dg~v~iwd~~-------~~~~~~~~~~h~~~v~~~~~-~ 348 (573)
..-. +.. ..+..++. .| ..++ ++....++|.+..|++. +.+.++.+..-.. +..+.. .
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~----~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq-~EgcvvDd 189 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQ----KTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQ-TEGMAADD 189 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECT----TTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSC-EEEEEEET
T ss_pred eccccccCcCCCCCCeeEEEEEecC----CCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCC-cceEEEcC
Confidence 1100 011 34555554 32 1233 56677888999999882 3355666655443 444444 4
Q ss_pred CCcEEEEEeCCCeEEEEeCC
Q psy2671 349 GSGLIYSASQDRTIKVWRAS 368 (573)
Q Consensus 349 ~~~~l~s~s~d~~i~vw~~~ 368 (573)
..+.||.+-.+.-|..++.+
T Consensus 190 ~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 190 EYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp TTTEEEEEETTTEEEEEECS
T ss_pred CCCeEEEecccceEEEEeCC
Confidence 56799999999776666643
No 295
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.74 E-value=0.82 Score=48.86 Aligned_cols=229 Identities=10% Similarity=0.041 Sum_probs=117.8
Q ss_pred CCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEE-EEeeCCeEEEEECCCCce---ecccccCCcccEEEEEecc
Q psy2671 227 GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGKQ---IGQPMRGHKQWITALSWEP 302 (573)
Q Consensus 227 ~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~-sgs~dg~i~vwd~~~~~~---~~~~~~~h~~~v~~~~~~~ 302 (573)
....|+..++......... .....+..|+|.+.+..|+ +-...+.|+.+++..... ....+...-....++++.+
T Consensus 402 n~~~Ir~i~l~~~~~~~l~-~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~ 480 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 480 (791)
T ss_dssp CBSSEEEECTTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred cccceeEeeccCCcceeee-cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee
Confidence 3456777777654432222 2345578999998665555 444567888888864211 1111111122334455443
Q ss_pred cccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC-cEEEEEeCC--CeEEEEeCCCCeeeEeccCC
Q psy2671 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQD--RTIKVWRASDGVMCRTLEGH 379 (573)
Q Consensus 303 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d--~~i~vw~~~~~~~~~~~~~~ 379 (573)
. .++++++-...+.|.+.++........+.........|++.+. +.||...+. +.|...++........+...
T Consensus 481 ~----~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~ 556 (791)
T 3m0c_C 481 I----HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN 556 (791)
T ss_dssp T----TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS
T ss_pred c----CCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCC
Confidence 1 2345666677788988888755444444444455788888764 566655532 56777776533222222222
Q ss_pred cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc-
Q psy2671 380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG- 458 (573)
Q Consensus 380 ~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~- 458 (573)
..+.+.|++.+. .+.+.++-.....|...++...... ..+..
T Consensus 557 l~~P~GLavD~~------------------------------------~~~LYwaD~~~~~I~~~d~dG~~~~-~v~~~~ 599 (791)
T 3m0c_C 557 IQWPNGITLDLL------------------------------------SGRLYWVDSKLHSISSIDVNGGNRK-TILEDE 599 (791)
T ss_dssp CSCEEEEEEETT------------------------------------TTEEEEEETTTTEEEEEETTSCSCE-EEEECT
T ss_pred CCCceEEEEecC------------------------------------CCeEEEEeCCCCcEEEEecCCCceE-EEecCC
Confidence 233344444321 1233333344456666666433221 11111
Q ss_pred -ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee
Q psy2671 459 -HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL 498 (573)
Q Consensus 459 -h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~ 498 (573)
.-.....|++.. ++++++-...+.|...|..+|+.+..+
T Consensus 600 ~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 600 KRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp TTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred CccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 111234566643 345555556678888887777554444
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.70 E-value=0.59 Score=46.63 Aligned_cols=153 Identities=12% Similarity=0.101 Sum_probs=84.6
Q ss_pred cEEEEEEcC-CCCeEEEE-eCCCeEEEEECCCCeeeEEecC---CCCcEEEEEE-------cCCCCeEEEEeeCC-----
Q psy2671 209 AVISVKFSP-NGRSLASG-SGDTTVRFWDVTTQTPLFKCEG---HKHWVLCIAW-------SPDSKQLVSGCKNG----- 271 (573)
Q Consensus 209 ~V~~~~fsp-~g~~las~-s~d~~i~iwd~~~~~~~~~~~~---h~~~V~~v~~-------s~dg~~l~sgs~dg----- 271 (573)
....++|+| +...|..+ ...+.|++.|..++........ .......++| +++|++|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899999 34445444 4457899999888765433322 1234789999 99999777776654
Q ss_pred --eEEEEECCC-Cceec----ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC-------CCeE------
Q psy2671 272 --VIHAWDSST-GKQIG----QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI-------LSQC------ 331 (573)
Q Consensus 272 --~i~vwd~~~-~~~~~----~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~-------~~~~------ 331 (573)
.|.+.+... |.... ..+.. -....+++..| ..+.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp----~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHP----INGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECT----TTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CceEEEEecCCCCceeecccceeecc-CCCceEEEEcC----CCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 255665433 22110 00100 00111222222 134566677778888888876 3332
Q ss_pred -----EEE-ec-CCCccEEEEEECCCcE-EEEE-eCCCeEEEEe
Q psy2671 332 -----VRV-LT-SHTRSVTCIRWGGSGL-IYSA-SQDRTIKVWR 366 (573)
Q Consensus 332 -----~~~-~~-~h~~~v~~~~~~~~~~-l~s~-s~d~~i~vw~ 366 (573)
... +. ........++|++++. ++.+ +..+.|+.++
T Consensus 295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid 338 (496)
T 3kya_A 295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSD 338 (496)
T ss_dssp GCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEe
Confidence 111 11 1223456788888773 4544 3456666644
No 297
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.68 E-value=0.051 Score=50.79 Aligned_cols=144 Identities=13% Similarity=0.122 Sum_probs=93.2
Q ss_pred CcEEEEEeCCCeEEEEcCCCCccceeeecc----c--cccEEEEEE---CCCCCEEEEee-------------CCCcEEE
Q psy2671 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTG----H--QQLINCVEF---SPDGRIIASAS-------------FDKSIKL 486 (573)
Q Consensus 429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~----h--~~~v~~v~~---sp~g~~las~s-------------~dg~i~l 486 (573)
+..+++.-..++|..|++..+......+.+ . ...+..|.+ .|+++++++.. .+..+..
T Consensus 25 g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~ 104 (334)
T 2p9w_A 25 QVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHS 104 (334)
T ss_dssp TEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEE
T ss_pred CEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEE
Confidence 445555558999999998744322112222 1 113578999 68988888643 2677999
Q ss_pred EeCC---CCeEEEeec--CC-----------cceEEEEEECCCCCEEEEEeCC-CcEEEEeCCcccccc---cc--cCcC
Q psy2671 487 WDGR---IGKFITTLR--GH-----------VQAVYMVAWSSDSRLLVSGSAD-STLKVWNMKTKKIEQ---DL--PGHG 544 (573)
Q Consensus 487 wd~~---~~~~~~~~~--~h-----------~~~v~~v~~s~dg~~las~s~D-~~v~vwd~~~~~~~~---~l--~~h~ 544 (573)
||+. +++.+.... .. ......++..++|+..++++.- +.|...+........ .. ....
T Consensus 105 ~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~ 184 (334)
T 2p9w_A 105 FNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQR 184 (334)
T ss_dssp EESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSC
T ss_pred EcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccc
Confidence 9998 777654332 11 1247899999999998888877 776666665432211 01 1111
Q ss_pred CCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 545 DEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 545 ~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
-..+.++++|||+.|+....++.|.-++
T Consensus 185 ~G~nGIv~~pdg~~Liv~~~~g~L~~fD 212 (334)
T 2p9w_A 185 PGYSGITFDPHSNKLIAFGGPRALTAFD 212 (334)
T ss_dssp CSCSEEEEETTTTEEEEESSSSSEEEEE
T ss_pred cCcceEEEeCCCCEEEEEcCCCeEEEEc
Confidence 2356899999999988887788776553
No 298
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.47 E-value=0.013 Score=62.04 Aligned_cols=162 Identities=11% Similarity=-0.058 Sum_probs=90.9
Q ss_pred EEEEEcCCC-CeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC--CeEEEEECCCCceeccc
Q psy2671 211 ISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN--GVIHAWDSSTGKQIGQP 287 (573)
Q Consensus 211 ~~~~fsp~g-~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d--g~i~vwd~~~~~~~~~~ 287 (573)
..+++.+.+ .+.++-...+.|.+.++..................|+++|++.+|+.+... +.|.+.++..... ...
T Consensus 456 ~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l 534 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSL 534 (699)
T ss_dssp CCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEE
T ss_pred ceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEE
Confidence 356777544 444444566789999877654332222222334678999976666655432 6777776643221 111
Q ss_pred ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC--CCccEEEEEECCCcEEEEEeCCCeEEEE
Q psy2671 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS--HTRSVTCIRWGGSGLIYSASQDRTIKVW 365 (573)
Q Consensus 288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~l~s~s~d~~i~vw 365 (573)
....-.+..++++.|. .++++++-+..+.|..+++........+.. .......+++..+.++++....+.|..+
T Consensus 535 ~~~~l~~PnGlavd~~----~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 535 VTENIQWPNGITLDLL----SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSA 610 (699)
T ss_dssp SCSSCSSCCCEEECTT----TCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEE
T ss_pred EeCCCCCccEEEEecc----CCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEE
Confidence 1111223445666542 345566666778888888864332222221 1223344555555666666677889999
Q ss_pred eCCCCeeeEecc
Q psy2671 366 RASDGVMCRTLE 377 (573)
Q Consensus 366 ~~~~~~~~~~~~ 377 (573)
+..+|.....+.
T Consensus 611 d~~~G~~~~~i~ 622 (699)
T 1n7d_A 611 NRLTGSDVNLLA 622 (699)
T ss_dssp ETTTEEEEECCC
T ss_pred EccCCCceEEee
Confidence 887777665553
No 299
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.30 E-value=0.81 Score=43.70 Aligned_cols=70 Identities=11% Similarity=0.114 Sum_probs=45.6
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee--eEEec---CCCCcEEEEEEcCC---CCeEEEEee-C-----CeEE
Q psy2671 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP--LFKCE---GHKHWVLCIAWSPD---SKQLVSGCK-N-----GVIH 274 (573)
Q Consensus 209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~--~~~~~---~h~~~V~~v~~s~d---g~~l~sgs~-d-----g~i~ 274 (573)
....++|.|+|++++ +..++.|.+++ +++. +.... ........|+|+|| +..|+.+.. . +.|.
T Consensus 32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 467999999998544 56679999998 3332 22221 12345789999998 555655443 2 5677
Q ss_pred EEECCCC
Q psy2671 275 AWDSSTG 281 (573)
Q Consensus 275 vwd~~~~ 281 (573)
.++...+
T Consensus 109 r~~~~~~ 115 (352)
T 2ism_A 109 RLRHLGE 115 (352)
T ss_dssp EEEECSS
T ss_pred EEEeCCC
Confidence 7877643
No 300
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.29 E-value=0.21 Score=48.14 Aligned_cols=141 Identities=13% Similarity=0.115 Sum_probs=87.9
Q ss_pred CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccc----cccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe--------
Q psy2671 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH----QQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK-------- 493 (573)
Q Consensus 426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h----~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~-------- 493 (573)
+.+|..++.+- ++.||.-++.... ..+.+.-. -..|..+..||+|.+||..+ +..|.|-.+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccc
Confidence 34555555543 3667766655332 22222211 22577899999999999886 4578887765221
Q ss_pred ----EEEeecC------CcceEEEEEECCC---CCEEEEEeCCCcEEEEeCCcccc-cccc---------cCcCCCEEEE
Q psy2671 494 ----FITTLRG------HVQAVYMVAWSSD---SRLLVSGSADSTLKVWNMKTKKI-EQDL---------PGHGDEVYAV 550 (573)
Q Consensus 494 ----~~~~~~~------h~~~v~~v~~s~d---g~~las~s~D~~v~vwd~~~~~~-~~~l---------~~h~~~v~~~ 550 (573)
..+.+.- ...+|..+.|+|- +..|++-..|++||+||+..... ...+ ......|.++
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEE
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEE
Confidence 0112211 2457999999994 55889999999999999975211 0011 2233678999
Q ss_pred EEccCCCEEEE--eeCCCcEE
Q psy2671 551 DWAPDGEKVAS--GGKDKVLR 569 (573)
Q Consensus 551 ~~s~d~~~l~s--~~~d~~i~ 569 (573)
+|..++-.|-. ....|-|+
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp EECTTSSCEEEEECTTSCEEE
T ss_pred EEcCCCcEEEEEecCCCCCEE
Confidence 99998766655 44777664
No 301
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.23 E-value=1.4 Score=45.77 Aligned_cols=228 Identities=11% Similarity=-0.027 Sum_probs=117.0
Q ss_pred eEEEEeeCCeEEEEECCCCceec-ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc
Q psy2671 263 QLVSGCKNGVIHAWDSSTGKQIG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341 (573)
Q Consensus 263 ~l~sgs~dg~i~vwd~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~ 341 (573)
+|+.+ ..+.|+.-++++..... .++.+ -....++.|.+. .+..+.+-..++.|+.+++........+......
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~-~~~~~~l~~d~~----~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~ 81 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTG-VKEASALDFDVT----DNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 81 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCS-CSCEEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSC
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCC-CCceEEEEEECC----CCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCC
Confidence 44433 56778888887653221 11222 234677887652 3455666667788888887654333333322233
Q ss_pred EEEEEEC--CCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671 342 VTCIRWG--GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL 419 (573)
Q Consensus 342 v~~~~~~--~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (573)
...+++. .....++-...+.|.+.++............-..-..+++.+.
T Consensus 82 P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~---------------------------- 133 (628)
T 4a0p_A 82 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPA---------------------------- 133 (628)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETT----------------------------
T ss_pred cceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccC----------------------------
Confidence 4455554 3334455555677888776533211111111112233333321
Q ss_pred hheeeeCCCCcEEEEEe-CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCeEEEe
Q psy2671 420 AKYQAQCPEGEKLVSGS-DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRIGKFITT 497 (573)
Q Consensus 420 ~~~~~~~~~~~~l~sg~-~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~~~~~~~ 497 (573)
.|.+..+-. ..+.|...++..... ..+...-...+.|+++++++.|..+ ...+.|...|...... ..
T Consensus 134 --------~G~lY~tD~g~~~~I~r~~~dG~~~--~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v 202 (628)
T 4a0p_A 134 --------EGFMYWTEWGGKPKIDRAAMDGSER--TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EV 202 (628)
T ss_dssp --------TTEEEEEECSSSCEEEEEETTSCSC--EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EE
T ss_pred --------CCeEEEeCCCCCCEEEEEeCCCCce--EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EE
Confidence 122222221 134555555443221 1111223456889999977666655 4567888888764332 23
Q ss_pred ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc
Q psy2671 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI 536 (573)
Q Consensus 498 ~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~ 536 (573)
+.........+++.. +.++++-...+.|...|..+++.
T Consensus 203 ~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 203 IADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp EEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred eeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCc
Confidence 322223345677654 44555555577888888766653
No 302
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.17 E-value=0.72 Score=43.89 Aligned_cols=124 Identities=11% Similarity=0.117 Sum_probs=71.6
Q ss_pred CCeEEEEcCCCCccc---eeeeccc-cccEEEEEECCCCCEEEEeeC-----------------CCcEEEEeCCCCeEEE
Q psy2671 438 DFTLFLWNPEKEKKS---LARMTGH-QQLINCVEFSPDGRIIASASF-----------------DKSIKLWDGRIGKFIT 496 (573)
Q Consensus 438 dg~i~lwd~~~~~~~---~~~~~~h-~~~v~~v~~sp~g~~las~s~-----------------dg~i~lwd~~~~~~~~ 496 (573)
+.++.+|++...... +..+.+. -...+.+++.++|.+.++... .|.|.-+|.. + +.
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~-~~ 214 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--D-VR 214 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--C-CE
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--e-EE
Confidence 456777765443222 1222221 234789999999998887641 2445555653 2 22
Q ss_pred eecCCcceEEEEEECCCCCEEEEEe-CCCcEEEEeCCc-ccc--cccccCcCCCEEEEEEcc-CCCEEEEeeCC
Q psy2671 497 TLRGHVQAVYMVAWSSDSRLLVSGS-ADSTLKVWNMKT-KKI--EQDLPGHGDEVYAVDWAP-DGEKVASGGKD 565 (573)
Q Consensus 497 ~~~~h~~~v~~v~~s~dg~~las~s-~D~~v~vwd~~~-~~~--~~~l~~h~~~v~~~~~s~-d~~~l~s~~~d 565 (573)
.+......-+.++||||++.|+.+. ..+.|..|++.. ++. .+.+ ...+..-.++..+ +|+..+++..+
T Consensus 215 ~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 215 VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 2222233467899999998877654 577899999863 322 1122 1123445677787 48776656533
No 303
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.84 E-value=3.2 Score=46.49 Aligned_cols=139 Identities=11% Similarity=0.126 Sum_probs=79.0
Q ss_pred CcEEEEEe----------CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE-e
Q psy2671 429 GEKLVSGS----------DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT-T 497 (573)
Q Consensus 429 ~~~l~sg~----------~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~-~ 497 (573)
..+++.|. ..|.|.+|+....+..+.......++|++++-- +|+++|.. ..++++|+....+.+. .
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~~~~L~~~ 920 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLASI--NSTVRLYEWTTEKELRTE 920 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEEEE--TTEEEEEEECTTSCEEEE
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEEEc--CCEEEEEECCCCceEEEE
Confidence 35676665 346788888754332222223345667777632 45554433 4789999987654333 1
Q ss_pred ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCC--cccccccc-cCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK--TKKIEQDL-PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572 (573)
Q Consensus 498 ~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~--~~~~~~~l-~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~ 572 (573)
...+ ..+..+.....+.+++.|..-..|.++..+ .+++...- .-+...++++.|-.++ .++.+..+|.+.+.+
T Consensus 921 ~~~~-~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~ 996 (1158)
T 3ei3_A 921 CNHY-NNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQ 996 (1158)
T ss_dssp EEEC-CCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEE
T ss_pred eecc-ccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEe
Confidence 1111 112222222346789999887777776543 33332111 1234568888887664 677788899887753
No 304
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.82 E-value=2.1 Score=44.35 Aligned_cols=134 Identities=6% Similarity=-0.120 Sum_probs=73.7
Q ss_pred CCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCC-CCEEEEeeCCCcEEEEeCCCCeEEEee-cCCcceE
Q psy2671 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD-GRIIASASFDKSIKLWDGRIGKFITTL-RGHVQAV 505 (573)
Q Consensus 428 ~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~-g~~las~s~dg~i~lwd~~~~~~~~~~-~~h~~~v 505 (573)
++..+++-...+.|+.+++...... ......-.....+++++. +++..+-+..+.|.+.+..... ...+ .......
T Consensus 360 ~~~ly~sD~~~~~I~r~~~~g~~~~-~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P 437 (619)
T 3s94_A 360 EGYIYWTDDEVRAIRRSFIDGSGSQ-FVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-RKILISEDLEEP 437 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCE-EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCCSE
T ss_pred CCeEEEEeCCCCeEEEEEcCCCccE-EEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe-EEEEEECCCCCe
Confidence 3445555556778888877643221 112212234568899874 4455555667889999876443 2232 2233456
Q ss_pred EEEEECCCCCEEEEEe-C-CCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEee
Q psy2671 506 YMVAWSSDSRLLVSGS-A-DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563 (573)
Q Consensus 506 ~~v~~s~dg~~las~s-~-D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~ 563 (573)
..+++.|...+|..+. . ...|...++............-...+.|++.++++.|.-+.
T Consensus 438 ~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD 497 (619)
T 3s94_A 438 RAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGD 497 (619)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred eeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEE
Confidence 7899998744444433 2 35666666654332211122223566788887666655443
No 305
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.74 E-value=1.2 Score=43.06 Aligned_cols=142 Identities=18% Similarity=0.230 Sum_probs=89.6
Q ss_pred cCCCCeEEEEeCCCeEEEEECCCCeeeEEecCC----CCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecc-----
Q psy2671 216 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGH----KHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ----- 286 (573)
Q Consensus 216 sp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h----~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~----- 286 (573)
..+|..++.+- ++.||.-++.....-+.+.-. -..+..+..||+|++||..+ +..|.|-.+..+.....
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 45666666654 578888887754332222221 12477799999999888765 45788888774321100
Q ss_pred ------ccc------CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC--eEEEEec---------CCCccEE
Q psy2671 287 ------PMR------GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS--QCVRVLT---------SHTRSVT 343 (573)
Q Consensus 287 ------~~~------~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~---------~h~~~v~ 343 (573)
.+. .....|..+.|+|... .+..|++-..|++||+||+... ++. .+. .+...|.
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~--~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~ 183 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSY--RDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDIT 183 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBG--GGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccC--CCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEE
Confidence 000 1246799999999654 4567999999999999999752 222 222 2235678
Q ss_pred EEEECCCc-EEEEEe--CCCeE
Q psy2671 344 CIRWGGSG-LIYSAS--QDRTI 362 (573)
Q Consensus 344 ~~~~~~~~-~l~s~s--~d~~i 362 (573)
+++|++++ .++..+ ..|-|
T Consensus 184 S~~Fg~~~lTLYvl~~t~~GDI 205 (452)
T 3pbp_A 184 DLEFSKDGLTLYCLNTTEGGDI 205 (452)
T ss_dssp EEEECTTSSCEEEEECTTSCEE
T ss_pred EEEEcCCCcEEEEEecCCCCCE
Confidence 88888766 355544 55554
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.49 E-value=1 Score=41.62 Aligned_cols=133 Identities=20% Similarity=0.255 Sum_probs=67.5
Q ss_pred CCcEEEEEeCC-----CeEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeCC-----CcEEEEeCCCCeEEE
Q psy2671 428 EGEKLVSGSDD-----FTLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASFD-----KSIKLWDGRIGKFIT 496 (573)
Q Consensus 428 ~~~~l~sg~~d-----g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~d-----g~i~lwd~~~~~~~~ 496 (573)
++..++.|+.+ ..+.+||+.+..-. +..+......-.++. -++++++.|+.+ ..+..||..+.+...
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 34555555543 35778887654321 111111111111222 267888888765 358899988775432
Q ss_pred e--ecCCcceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCcccc--cccccCcCCCEEEEEEccCCCEEEEeeCCC
Q psy2671 497 T--LRGHVQAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTKKI--EQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566 (573)
Q Consensus 497 ~--~~~h~~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~~~--~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~ 566 (573)
. +.........+. -++++++.|+.+ ..+.+||+.+.+- +..++........+. -+++.++.||.++
T Consensus 190 ~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~ 264 (301)
T 2vpj_A 190 VTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDG 264 (301)
T ss_dssp ECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCS
T ss_pred CCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCC
Confidence 2 221111112222 256777777764 4689999977542 222322111122222 2667777777653
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.24 E-value=1.9 Score=39.87 Aligned_cols=104 Identities=15% Similarity=0.190 Sum_probs=54.3
Q ss_pred CCcEEEEEeCC-----CeEEEEcCCCCccce-eeeccccccEEEEEECCCCCEEEEeeCC-----CcEEEEeCCCCeEEE
Q psy2671 428 EGEKLVSGSDD-----FTLFLWNPEKEKKSL-ARMTGHQQLINCVEFSPDGRIIASASFD-----KSIKLWDGRIGKFIT 496 (573)
Q Consensus 428 ~~~~l~sg~~d-----g~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~sp~g~~las~s~d-----g~i~lwd~~~~~~~~ 496 (573)
++..++.|+.+ ..+..||+.+..-.. ..+......-..+.+ ++++++.|+.+ ..+.+||..+.+...
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 34555666544 357788876543211 111111111122222 57788888765 468999998875433
Q ss_pred e--ecCCcceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCccc
Q psy2671 497 T--LRGHVQAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTKK 535 (573)
Q Consensus 497 ~--~~~h~~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~~ 535 (573)
. +.........+. -++++++.|+.+ ..+.+||+.+.+
T Consensus 237 ~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 237 VTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp ECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 2 221111112222 267777777765 357788886643
No 308
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.90 E-value=0.51 Score=47.10 Aligned_cols=140 Identities=9% Similarity=0.031 Sum_probs=77.7
Q ss_pred cEEEEEeCCCeEEEEcCCCCccceeeecc---ccccEEEEEE-------CCCCCEEEEeeCCC-------cEEEEeCCC-
Q psy2671 430 EKLVSGSDDFTLFLWNPEKEKKSLARMTG---HQQLINCVEF-------SPDGRIIASASFDK-------SIKLWDGRI- 491 (573)
Q Consensus 430 ~~l~sg~~dg~i~lwd~~~~~~~~~~~~~---h~~~v~~v~~-------sp~g~~las~s~dg-------~i~lwd~~~- 491 (573)
.++++-...+.|++.|+....... .... .......++| +++|+.|.++...+ .|.+.+...
T Consensus 153 ~Lyv~~~~~~~i~~ID~~~~~v~~-l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~ 231 (496)
T 3kya_A 153 HLYICYDGHKAIQLIDLKNRMLSS-PLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD 231 (496)
T ss_dssp EEEEEEETEEEEEEEETTTTEEEE-EECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred EEEEEECCCCeEEEEECCCCEEEE-EEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC
Confidence 344444444678888876543211 1111 1234789999 99999666665443 266665333
Q ss_pred CeEE-----EeecCCcceEEEEEECCCC-CEEEEEeCCCcEEEEeCC-------cccc-----------cccc--cCcCC
Q psy2671 492 GKFI-----TTLRGHVQAVYMVAWSSDS-RLLVSGSADSTLKVWNMK-------TKKI-----------EQDL--PGHGD 545 (573)
Q Consensus 492 ~~~~-----~~~~~h~~~v~~v~~s~dg-~~las~s~D~~v~vwd~~-------~~~~-----------~~~l--~~h~~ 545 (573)
+... ..+... .....++++|++ .++++-..++.|..+|+. ++.. ...+ .+...
T Consensus 232 G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~ 310 (496)
T 3kya_A 232 GTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPS 310 (496)
T ss_dssp SCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSS
T ss_pred CceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCC
Confidence 2211 111111 123467889954 455556677889999987 4443 1111 11223
Q ss_pred CEEEEEEccCCCEEEEe-eCCCcEEEc
Q psy2671 546 EVYAVDWAPDGEKVASG-GKDKVLRLW 571 (573)
Q Consensus 546 ~v~~~~~s~d~~~l~s~-~~d~~i~iw 571 (573)
.-+.++|+|+|++|..+ .....|+.+
T Consensus 311 ~p~~ia~~p~G~~lYvaD~~~h~I~ki 337 (496)
T 3kya_A 311 WEFQIFIHPTGKYAYFGVINNHYFMRS 337 (496)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CceEEEEcCCCCEEEEEeCCCCEEEEE
Confidence 45789999999964444 444556553
No 309
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.68 E-value=0.45 Score=41.43 Aligned_cols=131 Identities=13% Similarity=0.090 Sum_probs=74.3
Q ss_pred cEEEEEeCCCeEEEEcCCCCcc--c--eeeeccc--cccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe---------E
Q psy2671 430 EKLVSGSDDFTLFLWNPEKEKK--S--LARMTGH--QQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK---------F 494 (573)
Q Consensus 430 ~~l~sg~~dg~i~lwd~~~~~~--~--~~~~~~h--~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~---------~ 494 (573)
.+|....+| +++.=.+.+... - ..+..++ =..+..++|+|+|.+.++ .+|.+.-.+..+.. .
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~ 81 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKK 81 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEE
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccE
Confidence 455566666 665544443321 0 1111222 124679999999998887 67766666654421 1
Q ss_pred EEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc---c--cc--cCcCCCEEEEEEccCCCEEEEeeCCCc
Q psy2671 495 ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE---Q--DL--PGHGDEVYAVDWAPDGEKVASGGKDKV 567 (573)
Q Consensus 495 ~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~---~--~l--~~h~~~v~~~~~s~d~~~l~s~~~d~~ 567 (573)
+... +-. ...++.|.|+|.+.++ .||.|+-++..+.... . .. .+-=..+..|.|.|+|..-+.. |+.
T Consensus 82 IG~~-Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ 155 (236)
T 1tl2_A 82 IGNG-GWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ 155 (236)
T ss_dssp EECS-CGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred eccc-ccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc
Confidence 1110 111 1357889999988877 5688887776332211 0 01 1011367899999999765555 776
Q ss_pred EE
Q psy2671 568 LR 569 (573)
Q Consensus 568 i~ 569 (573)
++
T Consensus 156 ly 157 (236)
T 1tl2_A 156 FY 157 (236)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 310
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.54 E-value=1.1 Score=42.69 Aligned_cols=135 Identities=10% Similarity=0.112 Sum_probs=75.4
Q ss_pred CCCeEEEEcCCCC--ccceeeecc-----ccccEEEEEECC--CCC--EEEEeeC--CCcEEEEeCCCC----eEEEeec
Q psy2671 437 DDFTLFLWNPEKE--KKSLARMTG-----HQQLINCVEFSP--DGR--IIASASF--DKSIKLWDGRIG----KFITTLR 499 (573)
Q Consensus 437 ~dg~i~lwd~~~~--~~~~~~~~~-----h~~~v~~v~~sp--~g~--~las~s~--dg~i~lwd~~~~----~~~~~~~ 499 (573)
.+|.|.++|+.+. +.....+.+ ..-....+.+.+ +|. ++++-.. +.+|.+|+.... ..+..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6889999998743 211112222 123456777755 454 4454333 567888765442 2233444
Q ss_pred CC-cceEEEEEECCCCCEEEEEeC---C------------CcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEee
Q psy2671 500 GH-VQAVYMVAWSSDSRLLVSGSA---D------------STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563 (573)
Q Consensus 500 ~h-~~~v~~v~~s~dg~~las~s~---D------------~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~ 563 (573)
+. ....+.+++.++|.+.++... | ..=++|.+..++.. .+...-..-+.++||||++.|..+.
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~-~~~~~l~~pNGia~spDg~~lYvad 239 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVR-VVAEGFDFANGINISPDGKYVYIAE 239 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCE-EEEEEESSEEEEEECTTSSEEEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEE-EeecCCcccCcceECCCCCEEEEEe
Confidence 32 235789999999998887651 1 12334443333322 2222223568899999998876654
Q ss_pred -CCCcEEEcc
Q psy2671 564 -KDKVLRLWQ 572 (573)
Q Consensus 564 -~d~~i~iw~ 572 (573)
..+.|+.|+
T Consensus 240 t~~~~I~~~~ 249 (355)
T 3sre_A 240 LLAHKIHVYE 249 (355)
T ss_dssp GGGTEEEEEE
T ss_pred CCCCeEEEEE
Confidence 456666653
No 311
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.41 E-value=3.1 Score=38.39 Aligned_cols=133 Identities=15% Similarity=0.193 Sum_probs=66.5
Q ss_pred CCcEEEEEeCCC-----eEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeCC-------CcEEEEeCCCCeE
Q psy2671 428 EGEKLVSGSDDF-----TLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASFD-------KSIKLWDGRIGKF 494 (573)
Q Consensus 428 ~~~~l~sg~~dg-----~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~d-------g~i~lwd~~~~~~ 494 (573)
++..++.|+.++ .+.+||+.+..-. +..+.........+. -++++++.|+.+ ..+..||..+.+.
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 355666666443 5677887654321 111111111111222 267788887653 3488899887654
Q ss_pred EE--eecCCcceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCcccc--cccccCcCCCEEEEEEccCCCEEEEeeCC
Q psy2671 495 IT--TLRGHVQAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTKKI--EQDLPGHGDEVYAVDWAPDGEKVASGGKD 565 (573)
Q Consensus 495 ~~--~~~~h~~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~~~--~~~l~~h~~~v~~~~~s~d~~~l~s~~~d 565 (573)
.. .+.........+. -++++++.|+.+ +.+.+||+.+.+- +..++........+ .-+++.++.||.+
T Consensus 186 ~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~--~~~~~i~v~GG~~ 261 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC--AVNGLLYVVGGDD 261 (302)
T ss_dssp EEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBC
T ss_pred EECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE--EECCEEEEECCcC
Confidence 32 2221111112222 267777787764 3688999876542 22222111111122 2266777777765
Q ss_pred C
Q psy2671 566 K 566 (573)
Q Consensus 566 ~ 566 (573)
+
T Consensus 262 ~ 262 (302)
T 2xn4_A 262 G 262 (302)
T ss_dssp S
T ss_pred C
Confidence 4
No 312
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.95 E-value=0.79 Score=43.24 Aligned_cols=114 Identities=16% Similarity=0.096 Sum_probs=67.3
Q ss_pred CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEE-eCCCcEEEEECCCCeEEEEecC---
Q psy2671 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS-GKDGAIRIWDVILSQCVRVLTS--- 337 (573)
Q Consensus 262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~--- 337 (573)
..++.++.||.|.-.|..+|+...+........+....- +. ...++..++.. ..||.+..++..++.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~-~~-~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQE-PS-RLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCC-SC-TTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecC-Cc-cccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 368899999999999999998765432221111111110 00 00122233333 5899999999877744332211
Q ss_pred -CCccEEE---EEE------CCCcEEEEEeCCCeEEEEeCCCCeeeEecc
Q psy2671 338 -HTRSVTC---IRW------GGSGLIYSASQDRTIKVWRASDGVMCRTLE 377 (573)
Q Consensus 338 -h~~~v~~---~~~------~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~ 377 (573)
...++.. ... +.++.+++|+.++.+...|+.+|+.+-.+.
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 1112221 001 256789999999999999999998876654
No 313
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.94 E-value=2.3 Score=36.99 Aligned_cols=136 Identities=11% Similarity=0.071 Sum_probs=74.7
Q ss_pred eeCCCCcEEEEEeCCCeEEEEcCCCCcc-----ceeee--ccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE--
Q psy2671 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKK-----SLARM--TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF-- 494 (573)
Q Consensus 424 ~~~~~~~~l~sg~~dg~i~lwd~~~~~~-----~~~~~--~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~-- 494 (573)
+.+|+|.+.+. .+|.++-.++.+... .-..+ .+-.. -.++.|.|+|.+.++ .||.|.-++..+...
T Consensus 47 af~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~ 121 (236)
T 1tl2_A 47 FLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDN 121 (236)
T ss_dssp EECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC
T ss_pred EECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCc
Confidence 44576776666 677777777644211 00111 01111 367899999999988 569888787533110
Q ss_pred -----EEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc-----cccc--CcCCCEEEEEEccCCCEEEEe
Q psy2671 495 -----ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE-----QDLP--GHGDEVYAVDWAPDGEKVASG 562 (573)
Q Consensus 495 -----~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~-----~~l~--~h~~~v~~~~~s~d~~~l~s~ 562 (573)
...-++--..+..|.|.|+|.+.|.. |+.++-+...++... ...- +.-..-.-+.|.+++...+..
T Consensus 122 Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 122 WIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp HHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE
T ss_pred eeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe
Confidence 11111122457899999999888777 676544333321110 0111 111233346689988765544
Q ss_pred eCCCcE
Q psy2671 563 GKDKVL 568 (573)
Q Consensus 563 ~~d~~i 568 (573)
++.+
T Consensus 200 --~g~~ 203 (236)
T 1tl2_A 200 --GGKF 203 (236)
T ss_dssp --TTEE
T ss_pred --CCeE
Confidence 6644
No 314
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.73 E-value=4.4 Score=37.69 Aligned_cols=73 Identities=12% Similarity=0.109 Sum_probs=50.0
Q ss_pred EEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc
Q psy2671 464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI 536 (573)
Q Consensus 464 ~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~ 536 (573)
-++..|+.-..+..-+.-|.+++||+.++.++..-+-....|..-+-..+..-++.-...|.|.--.++...+
T Consensus 263 Vamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 263 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred EEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 4677787777888888999999999999998877655555665555444433444444667666666655443
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.70 E-value=4.3 Score=37.48 Aligned_cols=132 Identities=14% Similarity=0.205 Sum_probs=66.0
Q ss_pred CCcEEEEEeCC------CeEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeC---------CCcEEEEeCCC
Q psy2671 428 EGEKLVSGSDD------FTLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASF---------DKSIKLWDGRI 491 (573)
Q Consensus 428 ~~~~l~sg~~d------g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~---------dg~i~lwd~~~ 491 (573)
++..++.|+.+ ..+.+||+.+..-. +..+......-..+. -++++++.|+. -..+.+||..+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 34555666544 35778887764311 111111111111222 26777777764 24488999888
Q ss_pred CeEEEe--ecCCcceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCccc--ccccccCcCCCEEEEEEccCCCEEEEe
Q psy2671 492 GKFITT--LRGHVQAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTKK--IEQDLPGHGDEVYAVDWAPDGEKVASG 562 (573)
Q Consensus 492 ~~~~~~--~~~h~~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~~--~~~~l~~h~~~v~~~~~s~d~~~l~s~ 562 (573)
.+.... +.........+.+ ++++++.|+.+ ..+.+||+.+.+ .+..++.......++.+ +++.++.|
T Consensus 179 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~G 254 (306)
T 3ii7_A 179 ETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLA 254 (306)
T ss_dssp TEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEE
T ss_pred CeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEe
Confidence 754322 2211111122222 66777777654 358899987754 22233322222223333 66777778
Q ss_pred eCC
Q psy2671 563 GKD 565 (573)
Q Consensus 563 ~~d 565 (573)
|.+
T Consensus 255 G~~ 257 (306)
T 3ii7_A 255 GFQ 257 (306)
T ss_dssp CBC
T ss_pred CcC
Confidence 755
No 316
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.67 E-value=3.1 Score=38.60 Aligned_cols=133 Identities=13% Similarity=0.202 Sum_probs=66.5
Q ss_pred CCcEEEEEeCC-----CeEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeCC-----CcEEEEeCCCCeEEE
Q psy2671 428 EGEKLVSGSDD-----FTLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASFD-----KSIKLWDGRIGKFIT 496 (573)
Q Consensus 428 ~~~~l~sg~~d-----g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~d-----g~i~lwd~~~~~~~~ 496 (573)
++..++.|+.+ ..+..||+.+..-. +..+......-..+.+ ++++++.|+.+ ..+..||..+.+...
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 34555555433 35777887654311 1111111111122222 67788888765 358899988765432
Q ss_pred e--ecCCcceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCcccc--cccccCcCCCEEEEEEccCCCEEEEeeCCC
Q psy2671 497 T--LRGHVQAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTKKI--EQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566 (573)
Q Consensus 497 ~--~~~h~~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~~~--~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~ 566 (573)
. +........++.+ ++++++.|+.+ ..+.+||+.+.+- +..++........+. -+++.++.||.++
T Consensus 199 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~ 273 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV--HQGRIYVLGGYDG 273 (308)
T ss_dssp CCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCS
T ss_pred CCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE--ECCEEEEEcCcCC
Confidence 2 2111111122222 67777777765 4589999877543 222322111112222 2567777777553
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.54 E-value=4.5 Score=37.24 Aligned_cols=63 Identities=19% Similarity=0.290 Sum_probs=38.1
Q ss_pred CCCEEEEeeCCC-----cEEEEeCCCCeEEEe--ecCCcceEEEEEECCCCCEEEEEeCCC-----cEEEEeCCccc
Q psy2671 471 DGRIIASASFDK-----SIKLWDGRIGKFITT--LRGHVQAVYMVAWSSDSRLLVSGSADS-----TLKVWNMKTKK 535 (573)
Q Consensus 471 ~g~~las~s~dg-----~i~lwd~~~~~~~~~--~~~h~~~v~~v~~s~dg~~las~s~D~-----~v~vwd~~~~~ 535 (573)
++++++.|+.++ .+.+||..+.+.... +.........+. .++++++.|+.++ .+.+||+.+.+
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 678888887653 688999987654322 211111111222 2677777777653 48899987654
No 318
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.24 E-value=5.8 Score=37.64 Aligned_cols=59 Identities=15% Similarity=0.110 Sum_probs=37.5
Q ss_pred eEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc------cccccCcCCCEEEEEEccCCCEEEEee
Q psy2671 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI------EQDLPGHGDEVYAVDWAPDGEKVASGG 563 (573)
Q Consensus 504 ~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~------~~~l~~h~~~v~~~~~s~d~~~l~s~~ 563 (573)
....++| .+|.++++.-..+.|...++..... ...+..-..++..+++.|||...++..
T Consensus 269 ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 269 PPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 3456777 4677776666677777777754331 112212235789999999998766653
No 319
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.19 E-value=6 Score=37.61 Aligned_cols=72 Identities=10% Similarity=-0.020 Sum_probs=45.7
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe-eeEEec---CCCCcEEEEEEcCC---CCeEEEEee----C----Ce
Q psy2671 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-PLFKCE---GHKHWVLCIAWSPD---SKQLVSGCK----N----GV 272 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~-~~~~~~---~h~~~V~~v~~s~d---g~~l~sgs~----d----g~ 272 (573)
.....++|.|+|++ ..+..++.|++++. +++ .+..+. ........|+|+|+ +..|+.+.. + ..
T Consensus 29 ~~P~~ia~~pdG~l-~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRY-LVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEE-EEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeE-EEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 34678999999984 45566799999973 444 222221 12345789999998 555554433 2 56
Q ss_pred EEEEECCCC
Q psy2671 273 IHAWDSSTG 281 (573)
Q Consensus 273 i~vwd~~~~ 281 (573)
|..|+...+
T Consensus 107 v~r~~~~~~ 115 (354)
T 3a9g_A 107 VIRGRLDGS 115 (354)
T ss_dssp EEEEEECSS
T ss_pred EEEEEECCC
Confidence 777776543
No 320
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.07 E-value=11 Score=40.20 Aligned_cols=264 Identities=11% Similarity=0.100 Sum_probs=134.6
Q ss_pred CCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC
Q psy2671 249 KHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328 (573)
Q Consensus 249 ~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 328 (573)
...|.+|.-..+|. |-.|+.+| +..||-..-+............|.++.... + ..|-.++.+| +..||..+
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~-----~-g~lWigT~~G-l~~yd~~~ 91 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIID-----N-TYLYMGTDNG-ILVYNYRA 91 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEET-----T-TEEEEEETTE-EEEEETTT
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcC-----C-CcEEEEeCCC-eEEEeCCC
Confidence 45689998888874 55677777 445663221111100011223466654322 2 3455556555 67889876
Q ss_pred CeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEecc---C-CcceeeEEEeccCceeEEEEcCCCce
Q psy2671 329 SQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLE---G-HAHWVNTLALSTDYLMRVEATSTGGF 404 (573)
Q Consensus 329 ~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~---~-~~~~v~~~~~s~~~~~~~~~~~~~~~ 404 (573)
.+...........|.++.. .++.++.++.+ -|..++..++....... + ....|.++..
T Consensus 92 ~~f~~~~~~~~~~i~~i~~-~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~---------------- 153 (758)
T 3ott_A 92 DRYEQPETDFPTDVRTMAL-QGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIR---------------- 153 (758)
T ss_dssp TEECCCSCCCCSCEEEEEE-ETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEE----------------
T ss_pred CEEECcccCCCceEEEEEe-cCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEE----------------
Confidence 6433211112234666654 45677778776 56777776544321100 0 0011111111
Q ss_pred eeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc----ccccEEEEEECCCCCEEEEeeC
Q psy2671 405 KYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG----HQQLINCVEFSPDGRIIASASF 480 (573)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~----h~~~v~~v~~sp~g~~las~s~ 480 (573)
..++.+ -.|...| +..++..+.......... ....|.++...+++..|..|+.
T Consensus 154 ---------------------d~~g~l-Wigt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~ 210 (758)
T 3ott_A 154 ---------------------TKDNQI-YVGTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE 210 (758)
T ss_dssp ---------------------CTTCCE-EEEETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE
T ss_pred ---------------------cCCCCE-EEEeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC
Confidence 122333 3344444 556665543211111111 1224888888887776555654
Q ss_pred CCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccc-------cCcCCCEEEEEEc
Q psy2671 481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL-------PGHGDEVYAVDWA 553 (573)
Q Consensus 481 dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l-------~~h~~~v~~~~~s 553 (573)
+-+..+|..+++......-....|.++...++|.+.+ |+. +-+.+++..+++..... .-....|.++.-.
T Consensus 211 -~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D 287 (758)
T 3ott_A 211 -GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFAD 287 (758)
T ss_dssp -EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEEC
T ss_pred -CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEc
Confidence 4588889877654221111234588888888887655 343 45888887665432110 0112468888777
Q ss_pred cCCCEEEEeeCCC
Q psy2671 554 PDGEKVASGGKDK 566 (573)
Q Consensus 554 ~d~~~l~s~~~d~ 566 (573)
.+|..-+ |...|
T Consensus 288 ~~g~lWi-GT~~G 299 (758)
T 3ott_A 288 QEHNIWL-GTDYG 299 (758)
T ss_dssp TTCCEEE-EESSS
T ss_pred CCCCEEE-EeCCc
Confidence 6665433 33344
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.92 E-value=5.8 Score=36.76 Aligned_cols=92 Identities=13% Similarity=0.177 Sum_probs=49.7
Q ss_pred CCCCEEEEeeC-C-----CcEEEEeCCCCeEEEe--ecCCcceEEEEEECCCCCEEEEEeCCC-----cEEEEeCCcccc
Q psy2671 470 PDGRIIASASF-D-----KSIKLWDGRIGKFITT--LRGHVQAVYMVAWSSDSRLLVSGSADS-----TLKVWNMKTKKI 536 (573)
Q Consensus 470 p~g~~las~s~-d-----g~i~lwd~~~~~~~~~--~~~h~~~v~~v~~s~dg~~las~s~D~-----~v~vwd~~~~~~ 536 (573)
-++++++.|+. + ..+.+||..+.+.... +........++. -++++++.|+.++ .+.+||+.+.+-
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 46678888876 2 3588999887653322 211111111222 2677777777654 488899876542
Q ss_pred --cccccCcCCCEEEEEEccCCCEEEEeeCC
Q psy2671 537 --EQDLPGHGDEVYAVDWAPDGEKVASGGKD 565 (573)
Q Consensus 537 --~~~l~~h~~~v~~~~~s~d~~~l~s~~~d 565 (573)
+..++........+.+ +++.++.||.+
T Consensus 225 ~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 225 APFEAFPQERSSLSLVSL--VGTLYAIGGFA 253 (315)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEEEEEE
T ss_pred EECCCCCCcccceeEEEE--CCEEEEECCcc
Confidence 2222222222222222 56777777764
No 322
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.64 E-value=1.8 Score=40.91 Aligned_cols=101 Identities=17% Similarity=0.210 Sum_probs=62.9
Q ss_pred cEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE--EEee----cCCcceEEEEEECCC---CCEEEEE---eCCCcEEEE
Q psy2671 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKF--ITTL----RGHVQAVYMVAWSSD---SRLLVSG---SADSTLKVW 529 (573)
Q Consensus 462 ~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~--~~~~----~~h~~~v~~v~~s~d---g~~las~---s~D~~v~vw 529 (573)
.-..|+|.|||.++++--..|.|++++...++. +..+ .........|+++|| +.+|... ..++.|.-|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 357899999999877765589999998765543 2222 122456789999996 3444432 244556666
Q ss_pred eCCcc-----c-----c-ccccc---CcCCCEEEEEEccCCCEEEEeeC
Q psy2671 530 NMKTK-----K-----I-EQDLP---GHGDEVYAVDWAPDGEKVASGGK 564 (573)
Q Consensus 530 d~~~~-----~-----~-~~~l~---~h~~~v~~~~~s~d~~~l~s~~~ 564 (573)
....+ . . +..++ .|. -..|.|.|||...++.|.
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~--g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHN--GGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCC--CCCEEECTTSCEEEECBC
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCcc--CccccCCCCCCEEEEECC
Confidence 55441 1 1 11122 233 346899999987777653
No 323
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.51 E-value=6.4 Score=36.24 Aligned_cols=104 Identities=11% Similarity=0.143 Sum_probs=52.7
Q ss_pred eEEEEeC--CCeEEEEECCCCeeeE--EecCCCCcEEEEEEcCCCCeEEEEeeC----CeEEEEECCCCceec-ccccCC
Q psy2671 221 SLASGSG--DTTVRFWDVTTQTPLF--KCEGHKHWVLCIAWSPDSKQLVSGCKN----GVIHAWDSSTGKQIG-QPMRGH 291 (573)
Q Consensus 221 ~las~s~--d~~i~iwd~~~~~~~~--~~~~h~~~V~~v~~s~dg~~l~sgs~d----g~i~vwd~~~~~~~~-~~~~~h 291 (573)
.++.|+. ...+.+||..+.+-.. ........-.++.+ ++..++.|+.+ ..+.+||+.+..-.. ..+...
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 4455554 3578889988764221 11111111222222 56666777755 678889987764211 111111
Q ss_pred cccEEEEEecccccCCCCCEEEEEeCC------CcEEEEECCCCeEEE
Q psy2671 292 KQWITALSWEPFHLNHQCRRFASSGKD------GAIRIWDVILSQCVR 333 (573)
Q Consensus 292 ~~~v~~~~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~ 333 (573)
...-..+. .+++.++.||.+ ..+.+||..+.+-..
T Consensus 92 r~~~~~~~-------~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 92 RDSLAACA-------AEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp CBSCEEEE-------ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred ccceeEEE-------ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 11111111 134566777655 458888988776443
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.38 E-value=8.7 Score=35.40 Aligned_cols=103 Identities=16% Similarity=0.237 Sum_probs=52.9
Q ss_pred CcEEEEEeCC-----CeEEEEcCCCCccce-eeeccccccEEEEEECCCCCEEEEeeCC-----CcEEEEeCCCCeEEEe
Q psy2671 429 GEKLVSGSDD-----FTLFLWNPEKEKKSL-ARMTGHQQLINCVEFSPDGRIIASASFD-----KSIKLWDGRIGKFITT 497 (573)
Q Consensus 429 ~~~l~sg~~d-----g~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~sp~g~~las~s~d-----g~i~lwd~~~~~~~~~ 497 (573)
+.+++.|+.+ ..+..||+.+..-.. ..+......-..+.+ ++++++.|+.+ ..+.+||+.+.+....
T Consensus 169 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 246 (308)
T 1zgk_A 169 RLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFV 246 (308)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred CEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEEC
Confidence 4555555543 357788876542111 111111111122233 67788888765 4589999887754322
Q ss_pred --ecCCcceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCccc
Q psy2671 498 --LRGHVQAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTKK 535 (573)
Q Consensus 498 --~~~h~~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~~ 535 (573)
+.........+. -++++++.|+.+ ..+.+||+.+.+
T Consensus 247 ~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 247 APMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 211111112222 256777777754 347788876643
No 325
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=90.89 E-value=10 Score=35.18 Aligned_cols=132 Identities=14% Similarity=0.240 Sum_probs=64.7
Q ss_pred CCcEEEEEeCC-------CeEEEEcCCCCccce-eeeccccccEEEEEECCCCCEEEEeeCC------CcEEEEeCCCCe
Q psy2671 428 EGEKLVSGSDD-------FTLFLWNPEKEKKSL-ARMTGHQQLINCVEFSPDGRIIASASFD------KSIKLWDGRIGK 493 (573)
Q Consensus 428 ~~~~l~sg~~d-------g~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~sp~g~~las~s~d------g~i~lwd~~~~~ 493 (573)
++..++.|+.+ ..+.+||+.+..-.. ..+...... .+++. .++++++.|+.+ ..+.+||..+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG-HNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES-CEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc-cEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 35556666643 256778876543111 111100000 11222 467788888742 358899998875
Q ss_pred EEEe--ecCCcceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCcccc--cccccCcCCCEEEEEEccCCCEEEEeeC
Q psy2671 494 FITT--LRGHVQAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTKKI--EQDLPGHGDEVYAVDWAPDGEKVASGGK 564 (573)
Q Consensus 494 ~~~~--~~~h~~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~~~--~~~l~~h~~~v~~~~~s~d~~~l~s~~~ 564 (573)
.... +........++. -++++++.|+.+ ..+.+||+.+.+- +..++........+ ..+++.++.||.
T Consensus 187 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~ 262 (318)
T 2woz_A 187 WKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLV--SLAGSLYAIGGF 262 (318)
T ss_dssp EEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEE--EETTEEEEECCB
T ss_pred EEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEE--EECCEEEEECCe
Confidence 4322 221111112222 256777777653 3477889876542 22333222222222 235677777775
Q ss_pred C
Q psy2671 565 D 565 (573)
Q Consensus 565 d 565 (573)
+
T Consensus 263 ~ 263 (318)
T 2woz_A 263 A 263 (318)
T ss_dssp C
T ss_pred e
Confidence 4
No 326
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=90.74 E-value=11 Score=35.20 Aligned_cols=217 Identities=8% Similarity=0.123 Sum_probs=123.5
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCC-CeeeEeccCCcc----eee
Q psy2671 310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASD-GVMCRTLEGHAH----WVN 384 (573)
Q Consensus 310 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~-~~~~~~~~~~~~----~v~ 384 (573)
+.+|.-. ..++.++|+.+.+.++...-. ..|..=.|-.+..|.-.+ +..|..|++.. ..+.+.++.|.. .|.
T Consensus 79 ~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QII 155 (365)
T 2xzh_A 79 KVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQII 155 (365)
T ss_dssp SEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEE
T ss_pred cEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEE
Confidence 4444443 678999999999888776654 456666776666544443 35788898864 234444444432 222
Q ss_pred EEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE-EEe------CCCeEEEEcCCCCccceeeec
Q psy2671 385 TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV-SGS------DDFTLFLWNPEKEKKSLARMT 457 (573)
Q Consensus 385 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sg~------~dg~i~lwd~~~~~~~~~~~~ 457 (573)
....++ +.+.++ +|- -.|.+.+|..+.. ....+.
T Consensus 156 nY~~d~-------------------------------------~~kW~~l~GI~~~~~~v~G~mQLYS~er~--~sQ~ie 196 (365)
T 2xzh_A 156 NYRTDA-------------------------------------KQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIE 196 (365)
T ss_dssp EEEECT-------------------------------------TSCEEEEEEEEEETTEEEEEEEEEETTTT--EEEEEC
T ss_pred EEEECC-------------------------------------CCCEEEEEeEeccCCccceeEEEEeeccc--ccceee
Confidence 222222 222221 111 2367889987653 345667
Q ss_pred cccccEEEEEECCC---CCEEEEeeC---CCcEEEEeCCCC---e-----EEEeec----CCcceEEEEEECCCCCEEEE
Q psy2671 458 GHQQLINCVEFSPD---GRIIASASF---DKSIKLWDGRIG---K-----FITTLR----GHVQAVYMVAWSSDSRLLVS 519 (573)
Q Consensus 458 ~h~~~v~~v~~sp~---g~~las~s~---dg~i~lwd~~~~---~-----~~~~~~----~h~~~v~~v~~s~dg~~las 519 (573)
||......+.+..+ .++++-+.. .+.+++.++... . ....+. +-...--++..|+.-..+..
T Consensus 197 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyv 276 (365)
T 2xzh_A 197 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 276 (365)
T ss_dssp CSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEE
Confidence 77544332222111 123443332 257888886332 1 111111 11222346777887778888
Q ss_pred EeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcE
Q psy2671 520 GSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568 (573)
Q Consensus 520 ~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i 568 (573)
-++-|.+++||+.++.++..-+--.+.|...+-+.+..-++.....|.|
T Consensus 277 iTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqV 325 (365)
T 2xzh_A 277 ITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 325 (365)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEE
T ss_pred EeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEE
Confidence 8899999999999999886655455677665555444445555566654
No 327
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=90.61 E-value=13 Score=36.09 Aligned_cols=73 Identities=11% Similarity=0.079 Sum_probs=50.9
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc
Q psy2671 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535 (573)
Q Consensus 463 v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~ 535 (573)
--++.+|+.-..+..-+.-|.+++||+.++.++..-+-....|..-+-..+..-++.-...|.|.--.++...
T Consensus 261 Pvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 261 PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred eeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 3467788877788888899999999999999887665555566555544444444445567766666665544
No 328
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.07 E-value=13 Score=35.19 Aligned_cols=59 Identities=19% Similarity=0.142 Sum_probs=38.0
Q ss_pred cEEEEEECC-------CCCEEEEeeCCCcEEEEeCCCCeEEEe---ecCCcceEEEEEECCCCCEEEEE
Q psy2671 462 LINCVEFSP-------DGRIIASASFDKSIKLWDGRIGKFITT---LRGHVQAVYMVAWSSDSRLLVSG 520 (573)
Q Consensus 462 ~v~~v~~sp-------~g~~las~s~dg~i~lwd~~~~~~~~~---~~~h~~~v~~v~~s~dg~~las~ 520 (573)
....++|.. +|+++++.-..+.|...+...++.... +......+..+++.|||.+.++.
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 466777753 467777666777777777665543322 22223468899999999876643
No 329
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.05 E-value=2.9 Score=41.37 Aligned_cols=102 Identities=12% Similarity=0.161 Sum_probs=61.0
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE--EEeecC------CcceEEEEEECCC---CCEEEEEeC---------
Q psy2671 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKF--ITTLRG------HVQAVYMVAWSSD---SRLLVSGSA--------- 522 (573)
Q Consensus 463 v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~--~~~~~~------h~~~v~~v~~s~d---g~~las~s~--------- 522 (573)
...|+|.|+|+++++-...+.|++++..+++. +..+.. .......|+|+|| +.+|..+..
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~ 108 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDK 108 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--C
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcc
Confidence 56899999999887755445799888655543 223321 2356789999995 555444332
Q ss_pred ----CCcEEEEeCCcc-------cc-cccccC-cCCCEEEEEEccCCCEEEEeeC
Q psy2671 523 ----DSTLKVWNMKTK-------KI-EQDLPG-HGDEVYAVDWAPDGEKVASGGK 564 (573)
Q Consensus 523 ----D~~v~vwd~~~~-------~~-~~~l~~-h~~~v~~~~~s~d~~~l~s~~~ 564 (573)
...|.-|+.... +. +..++. .......+.|.|||+..++.+.
T Consensus 109 ~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 109 ELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 234555554321 11 111221 1124678999999987776553
No 330
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.07 E-value=17 Score=35.74 Aligned_cols=97 Identities=14% Similarity=0.147 Sum_probs=50.5
Q ss_pred eCCCCcEEEEEeCCCeEEEEcCCCCcc-ceeeecc------ccccEEEEEECCC----CCEEEEeeC------------C
Q psy2671 425 QCPEGEKLVSGSDDFTLFLWNPEKEKK-SLARMTG------HQQLINCVEFSPD----GRIIASASF------------D 481 (573)
Q Consensus 425 ~~~~~~~l~sg~~dg~i~lwd~~~~~~-~~~~~~~------h~~~v~~v~~sp~----g~~las~s~------------d 481 (573)
+.|+|.++++-...+.|++++..++.. .+..+.. ....+..|+|+|+ +.+.++-+. .
T Consensus 34 ~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~ 113 (454)
T 1cru_A 34 WGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQ 113 (454)
T ss_dssp ECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEE
T ss_pred EcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccccc
Confidence 346777666654445788887543322 1222211 2345779999995 444444332 1
Q ss_pred CcEEEEeCCC--C-----eEEE-eecC-CcceEEEEEECCCCCEEEEEe
Q psy2671 482 KSIKLWDGRI--G-----KFIT-TLRG-HVQAVYMVAWSSDSRLLVSGS 521 (573)
Q Consensus 482 g~i~lwd~~~--~-----~~~~-~~~~-h~~~v~~v~~s~dg~~las~s 521 (573)
..|.-|+... + +.+. .+.. .......++|.|||.+.++.+
T Consensus 114 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 114 TIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2344444321 1 1111 1221 112357899999998777654
No 331
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=88.86 E-value=16 Score=34.57 Aligned_cols=60 Identities=17% Similarity=0.108 Sum_probs=40.4
Q ss_pred eEEEEEEC-------CCCCEEEEEeCCCcEEEEeCCcc-ccc--cc-ccCcCCCEEEEEEccCCCEEEEee
Q psy2671 504 AVYMVAWS-------SDSRLLVSGSADSTLKVWNMKTK-KIE--QD-LPGHGDEVYAVDWAPDGEKVASGG 563 (573)
Q Consensus 504 ~v~~v~~s-------~dg~~las~s~D~~v~vwd~~~~-~~~--~~-l~~h~~~v~~~~~s~d~~~l~s~~ 563 (573)
....++|. .+|.++++.-..+.|...++... +.. .. +.+-...+..+++.|||...++..
T Consensus 260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 46678883 57777777767778888888753 221 12 333345789999999998766654
No 332
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.65 E-value=2.1 Score=42.90 Aligned_cols=120 Identities=16% Similarity=0.128 Sum_probs=71.9
Q ss_pred EEEEcCCC----CccceeeeccccccEEEEEECCCCCEEEEee-CCCcEEEEeCCCC------eE-------EEeecCCc
Q psy2671 441 LFLWNPEK----EKKSLARMTGHQQLINCVEFSPDGRIIASAS-FDKSIKLWDGRIG------KF-------ITTLRGHV 502 (573)
Q Consensus 441 i~lwd~~~----~~~~~~~~~~h~~~v~~v~~sp~g~~las~s-~dg~i~lwd~~~~------~~-------~~~~~~h~ 502 (573)
+.+.|.+. ... +.....-.+....+.++|||++++.++ .+.++.++|.+.. +. .....- .
T Consensus 300 v~ViD~~~~~~~~~~-~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-G 377 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSK-FTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-G 377 (638)
T ss_dssp CCEEECSCBTTBCCS-SEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-C
T ss_pred eeEEccccccccCCc-eEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-C
Confidence 56666654 222 222222334456789999999987765 6889999997631 11 122221 1
Q ss_pred ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc----------cccccccCcCCCEEEEE------EccCCCEEEEee
Q psy2671 503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK----------KIEQDLPGHGDEVYAVD------WAPDGEKVASGG 563 (573)
Q Consensus 503 ~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~----------~~~~~l~~h~~~v~~~~------~s~d~~~l~s~~ 563 (573)
..-...+|.++|.-..|--.|..|.-|++... ..+..+.-|-.+ -.+. -.|||+||++..
T Consensus 378 lGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Yqp-GH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 378 LGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQP-GHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp SCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCE-EEEEETTTTSTTCCSCEEEEEE
T ss_pred CcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCC-cccccCCCccCCCCccEEEEec
Confidence 23567899999955555568999999999653 223333333221 1121 257899998864
No 333
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=87.68 E-value=43 Score=38.08 Aligned_cols=196 Identities=8% Similarity=0.112 Sum_probs=102.6
Q ss_pred CCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCC-eeeEeccCCc----ceeeEEEeccC
Q psy2671 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDG-VMCRTLEGHA----HWVNTLALSTD 391 (573)
Q Consensus 317 ~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~-~~~~~~~~~~----~~v~~~~~s~~ 391 (573)
...++.|+|+.+...++...-. ..|..=.|-.+..|.-. .+..|-.|++... .+.+.+..|. ..|.....++
T Consensus 84 ag~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~~l~lV-T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~- 160 (1630)
T 1xi4_A 84 AGKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA- 160 (1630)
T ss_pred cCCeEEEeehHHhhhhcccccC-CCceEEEecCCCeeEEE-cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCC-
Confidence 3678999999887766654443 34555566665544333 2457888988532 2333333332 1222222222
Q ss_pred ceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE-E------EeCCCeEEEEcCCCCccceeeeccccccEE
Q psy2671 392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV-S------GSDDFTLFLWNPEKEKKSLARMTGHQQLIN 464 (573)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s------g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~ 464 (573)
+.+.++ + +...|.+.+|..+... ...+.||.....
T Consensus 161 ------------------------------------~~kW~~l~gi~~~~~~v~G~mQLyS~er~~--sQ~iegha~~F~ 202 (1630)
T 1xi4_A 161 ------------------------------------KQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFA 202 (1630)
T ss_pred ------------------------------------CCCeEEEEeeccCCCcccceeeeeeccccc--chhhhHhHhhhh
Confidence 222222 1 1235788898876432 334555654433
Q ss_pred EEEEC--C-CCCEEEEeeC---CCcEEEEeCCCC---eE-----EEeecC----CcceEEEEEECCCCCEEEEEeCCCcE
Q psy2671 465 CVEFS--P-DGRIIASASF---DKSIKLWDGRIG---KF-----ITTLRG----HVQAVYMVAWSSDSRLLVSGSADSTL 526 (573)
Q Consensus 465 ~v~~s--p-~g~~las~s~---dg~i~lwd~~~~---~~-----~~~~~~----h~~~v~~v~~s~dg~~las~s~D~~v 526 (573)
.+.+. + ..++++.+.. .+.++|.++... .. ...+.. -...-.++..|+.-..+..-+.-|.+
T Consensus 203 ~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~ 282 (1630)
T 1xi4_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI 282 (1630)
T ss_pred eeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceE
Confidence 33321 1 1223332222 367888876432 10 000100 01122356777777788888899999
Q ss_pred EEEeCCcccccccccCcCCCEEEEEEc
Q psy2671 527 KVWNMKTKKIEQDLPGHGDEVYAVDWA 553 (573)
Q Consensus 527 ~vwd~~~~~~~~~l~~h~~~v~~~~~s 553 (573)
.+||+.++.++..-+-..+.|...+-+
T Consensus 283 ~~~d~~t~~~i~~~ris~~~iF~~~~~ 309 (1630)
T 1xi4_A 283 HLYDLETGTCIYMNRISGETIFVTAPH 309 (1630)
T ss_pred EEEecccchhhhhccccCCceEEeccC
Confidence 999999998875443334455444433
No 334
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=87.62 E-value=1.9 Score=41.10 Aligned_cols=98 Identities=13% Similarity=0.191 Sum_probs=56.8
Q ss_pred EEEEEECCCCC-EEEEeeCCCcEEEEeCCCCeEE---Eee----cCCcceEEEEEECCC---CCEEEEE-eC-------C
Q psy2671 463 INCVEFSPDGR-IIASASFDKSIKLWDGRIGKFI---TTL----RGHVQAVYMVAWSSD---SRLLVSG-SA-------D 523 (573)
Q Consensus 463 v~~v~~sp~g~-~las~s~dg~i~lwd~~~~~~~---~~~----~~h~~~v~~v~~s~d---g~~las~-s~-------D 523 (573)
...|+|.|+|+ +++ +...|.|++++.. ++.. ..+ .........++++|+ +.+|..+ +. .
T Consensus 20 P~~i~~~pdG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 20 PWALAFLPDNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp EEEEEECSTTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred cEEEEEcCCCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 57899999999 554 5567999999853 3321 111 112345688999996 4444443 22 2
Q ss_pred CcEEEEeCCcc-------c-cccccc-----CcCCCEEEEEEccCCCEEEEeeC
Q psy2671 524 STLKVWNMKTK-------K-IEQDLP-----GHGDEVYAVDWAPDGEKVASGGK 564 (573)
Q Consensus 524 ~~v~vwd~~~~-------~-~~~~l~-----~h~~~v~~~~~s~d~~~l~s~~~ 564 (573)
..|..|++... + .+..++ .|. -..+.|.|||...++.+.
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSSEEEEEECC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCCcEEEEECC
Confidence 34666665432 1 111222 232 346999999976666543
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=87.43 E-value=18 Score=33.38 Aligned_cols=104 Identities=21% Similarity=0.276 Sum_probs=53.2
Q ss_pred CCcEEEEEeC-C-----CeEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeCCC-----cEEEEeCCCCeEE
Q psy2671 428 EGEKLVSGSD-D-----FTLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASFDK-----SIKLWDGRIGKFI 495 (573)
Q Consensus 428 ~~~~l~sg~~-d-----g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~dg-----~i~lwd~~~~~~~ 495 (573)
++..++.|+. + ..+.+||+.+..-. +..+......-.++.+ ++++++.|+.++ .+.+||..+.+..
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 3455566654 2 36778887654211 1111111111112222 678888888665 4888998877543
Q ss_pred Ee--ecCCcceEEEEEECCCCCEEEEEeCCC--------------cEEEEeCCccc
Q psy2671 496 TT--LRGHVQAVYMVAWSSDSRLLVSGSADS--------------TLKVWNMKTKK 535 (573)
Q Consensus 496 ~~--~~~h~~~v~~v~~s~dg~~las~s~D~--------------~v~vwd~~~~~ 535 (573)
.. +.........+.+ ++++++.|+.++ .+.+||+.+.+
T Consensus 226 ~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 226 PFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred ECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 22 2211111122222 567777777532 36788887654
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=86.03 E-value=40 Score=38.26 Aligned_cols=70 Identities=11% Similarity=0.085 Sum_probs=42.5
Q ss_pred EEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Q psy2671 464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533 (573)
Q Consensus 464 ~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~ 533 (573)
-++..|+.-..+..-+.-|.+.++|+.++.++..-+-....|...+-.....-++.....|.|.--.+..
T Consensus 262 v~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred eEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence 3567777777777888899999999999987765443344454444333322233333555554444443
No 337
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=85.90 E-value=27 Score=33.98 Aligned_cols=217 Identities=9% Similarity=0.126 Sum_probs=124.6
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCC-CeeeEeccCCcc----eee
Q psy2671 310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASD-GVMCRTLEGHAH----WVN 384 (573)
Q Consensus 310 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~-~~~~~~~~~~~~----~v~ 384 (573)
+.+|.-. ..++.++|+.+.+.++...-.. .|..=.|-.+..|.-. .+..|..|++.. ..+.+.++.|.. .|.
T Consensus 78 ~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~l~lV-T~taVyHWsi~~~s~P~kvFdR~~~L~~~QII 154 (494)
T 1bpo_A 78 KVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQII 154 (494)
T ss_dssp SCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTEEEEE-CSSEEEEEESSSSCCCEEEEECCGGGTTCEEE
T ss_pred cEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCeEEEE-cCCeeEEecccCCCCchhheecchhcccceEE
Confidence 3444433 6789999999998887765544 4545556555544333 356788898863 234444444432 222
Q ss_pred EEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE-EE------eCCCeEEEEcCCCCccceeeec
Q psy2671 385 TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV-SG------SDDFTLFLWNPEKEKKSLARMT 457 (573)
Q Consensus 385 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sg------~~dg~i~lwd~~~~~~~~~~~~ 457 (573)
....+ ++.+.++ +| ...|.+.+|..+.. ....+.
T Consensus 155 nY~~d-------------------------------------~~~kW~~l~GI~~~~~~v~G~mQLYS~er~--~sQ~ie 195 (494)
T 1bpo_A 155 NYRTD-------------------------------------AKQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIE 195 (494)
T ss_dssp EEEEC-------------------------------------TTSSEEEEEEEEEETTEEEEEEEEEESTTC--CEEEEC
T ss_pred EEEEC-------------------------------------CCCCeEEEEeecccCCcccceEEEeecccc--ccchhe
Confidence 22222 2222222 11 12367889987653 345667
Q ss_pred cccccEEEEEECCC---CCEEEEeeC---CCcEEEEeCCCC--------eEEEeec----CCcceEEEEEECCCCCEEEE
Q psy2671 458 GHQQLINCVEFSPD---GRIIASASF---DKSIKLWDGRIG--------KFITTLR----GHVQAVYMVAWSSDSRLLVS 519 (573)
Q Consensus 458 ~h~~~v~~v~~sp~---g~~las~s~---dg~i~lwd~~~~--------~~~~~~~----~h~~~v~~v~~s~dg~~las 519 (573)
||......+.+..+ .++++-+.. .+.++|.++... +....+. .-...-.++..|+.-..+..
T Consensus 196 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyv 275 (494)
T 1bpo_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (494)
T ss_dssp CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEE
Confidence 77654443333221 124444433 268888887432 1111111 11223346788888888888
Q ss_pred EeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcE
Q psy2671 520 GSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568 (573)
Q Consensus 520 ~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i 568 (573)
-+.-|.+++||+.++.++..-+--.+.|...+-+.+..-++.....|.|
T Consensus 276 iTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqV 324 (494)
T 1bpo_A 276 ITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 324 (494)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEE
T ss_pred EecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceE
Confidence 8999999999999999876555455667666555555555555566654
No 338
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=83.97 E-value=4.6 Score=38.01 Aligned_cols=117 Identities=11% Similarity=0.181 Sum_probs=65.4
Q ss_pred CcEEEEEeCCCeEEEEeCCCCeeeEeccCCc-ceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671 350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHA-HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE 428 (573)
Q Consensus 350 ~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (573)
++.++.++.||.|.-.|..+|+..=.++... ..+ +.... + ....+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~--~~~~~-----------------~---------------~~~~~ 55 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPL--IEIQE-----------------P---------------SRLET 55 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCS--EECCC-----------------S---------------CTTTS
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCc--EEecC-----------------C---------------ccccC
Confidence 3578999999999999999887654443210 000 00000 0 00012
Q ss_pred CcEEEEE-eCCCeEEEEcCCCCccceeeecc---ccccEEE---EEE-C----CCCCEEEEeeCCCcEEEEeCCCCeEEE
Q psy2671 429 GEKLVSG-SDDFTLFLWNPEKEKKSLARMTG---HQQLINC---VEF-S----PDGRIIASASFDKSIKLWDGRIGKFIT 496 (573)
Q Consensus 429 ~~~l~sg-~~dg~i~lwd~~~~~~~~~~~~~---h~~~v~~---v~~-s----p~g~~las~s~dg~i~lwd~~~~~~~~ 496 (573)
+..++.. ..||.+..++..++......-.. ...++.. ..+ . ..+..+.+|+.+|++...|.++|+.+.
T Consensus 56 ~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 56 YETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIIS 135 (339)
T ss_dssp SEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEE
T ss_pred CcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEE
Confidence 2333333 57888888887665332211110 1111111 000 0 134578899999999999999999998
Q ss_pred eecC
Q psy2671 497 TLRG 500 (573)
Q Consensus 497 ~~~~ 500 (573)
.+..
T Consensus 136 ~~~~ 139 (339)
T 2be1_A 136 AFGP 139 (339)
T ss_dssp EEST
T ss_pred EEec
Confidence 8763
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=82.54 E-value=19 Score=33.93 Aligned_cols=125 Identities=12% Similarity=-0.004 Sum_probs=55.5
Q ss_pred CeEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeCC------CcEEEEeC--CCCeEEE--eecCCcceEEE
Q psy2671 439 FTLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASFD------KSIKLWDG--RIGKFIT--TLRGHVQAVYM 507 (573)
Q Consensus 439 g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~d------g~i~lwd~--~~~~~~~--~~~~h~~~v~~ 507 (573)
..+.+||+.+..-. +..+......-.+++. -++++++.|+.+ ..+..||. .+.+... .+.........
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 46888888765321 1111110011012222 256777777643 34677776 4443222 22111111111
Q ss_pred EEECCCCCEEEEEeCC----------------------CcEEEEeCCccc--ccccccCcCCCEEEEEEccCCCEEEEee
Q psy2671 508 VAWSSDSRLLVSGSAD----------------------STLKVWNMKTKK--IEQDLPGHGDEVYAVDWAPDGEKVASGG 563 (573)
Q Consensus 508 v~~s~dg~~las~s~D----------------------~~v~vwd~~~~~--~~~~l~~h~~~v~~~~~s~d~~~l~s~~ 563 (573)
.+...++++++.|+.+ ..+.+||+.+.+ .+..++.....-.+ ...+++.++.||
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~GG 324 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS--LPWNNSLLIIGG 324 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE--EEETTEEEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee--EEeCCEEEEEee
Confidence 1222356777777632 247789987654 22333322222122 234677888888
Q ss_pred CCC
Q psy2671 564 KDK 566 (573)
Q Consensus 564 ~d~ 566 (573)
.++
T Consensus 325 ~~~ 327 (357)
T 2uvk_A 325 ETA 327 (357)
T ss_dssp ECG
T ss_pred eCC
Confidence 653
No 340
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=81.96 E-value=15 Score=36.33 Aligned_cols=101 Identities=15% Similarity=0.145 Sum_probs=58.4
Q ss_pred EEEEEECCCCC-EEEEeeCCCcEEEEeCCCC---eEEEeec-----C----CcceEEEEEECCC----CCEEEEEeC--C
Q psy2671 463 INCVEFSPDGR-IIASASFDKSIKLWDGRIG---KFITTLR-----G----HVQAVYMVAWSSD----SRLLVSGSA--D 523 (573)
Q Consensus 463 v~~v~~sp~g~-~las~s~dg~i~lwd~~~~---~~~~~~~-----~----h~~~v~~v~~s~d----g~~las~s~--D 523 (573)
-..|+|.|||. .|+++...|.|++++.... ..+..+. + .......|+|+|+ +.+.++-+. +
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 46899999996 4555677899999975322 1122221 1 1356789999996 444333221 1
Q ss_pred ----------CcEEEEeCCcc----------cccccc----cCcCCCEEEEEEccCCCEEEEeeCC
Q psy2671 524 ----------STLKVWNMKTK----------KIEQDL----PGHGDEVYAVDWAPDGEKVASGGKD 565 (573)
Q Consensus 524 ----------~~v~vwd~~~~----------~~~~~l----~~h~~~v~~~~~s~d~~~l~s~~~d 565 (573)
..|.-|.+..+ +.+..+ ..| ....|.|.|||+..++.|..
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H--~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKH--LGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSS--CEEEEEECTTSCEEEEECCT
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcc--cCCcEeECCCCcEEEEeCCC
Confidence 13444555321 111111 134 35789999999877776654
No 341
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=81.42 E-value=36 Score=32.00 Aligned_cols=73 Identities=21% Similarity=0.157 Sum_probs=47.0
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee--eEEe----cCCCCcEEEEEEcCC---CCeEEEE---eeCCeEEE
Q psy2671 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP--LFKC----EGHKHWVLCIAWSPD---SKQLVSG---CKNGVIHA 275 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~--~~~~----~~h~~~V~~v~~s~d---g~~l~sg---s~dg~i~v 275 (573)
...+.++|.|||+.+++--..|.|++++..+++. +..+ .........|+|+|| +..|+.. ..++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 4568999999998777665589999998665543 2222 122456789999996 3445432 23455666
Q ss_pred EECCC
Q psy2671 276 WDSST 280 (573)
Q Consensus 276 wd~~~ 280 (573)
|....
T Consensus 112 ~~~~~ 116 (347)
T 3das_A 112 MLYDE 116 (347)
T ss_dssp EEBCT
T ss_pred EEeCC
Confidence 66544
No 342
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=80.92 E-value=32 Score=31.17 Aligned_cols=50 Identities=16% Similarity=0.296 Sum_probs=28.1
Q ss_pred CCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCC
Q psy2671 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASD 369 (573)
Q Consensus 318 dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~ 369 (573)
||.|..|-......+-.-......|..++......++. . |+.+..|-...
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~ 90 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL-K-DGEVIAWGGNE 90 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEE-E-TTEEEEEECCT
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEE-E-CCEEEEeeCCC
Confidence 89999997543211110011123566666665555555 4 88888887543
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=76.77 E-value=7.6 Score=38.96 Aligned_cols=68 Identities=9% Similarity=0.083 Sum_probs=47.4
Q ss_pred EEEEcCCCCeEEEEe-CCCeEEEEECCCC------ee-------eEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEE
Q psy2671 212 SVKFSPNGRSLASGS-GDTTVRFWDVTTQ------TP-------LFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277 (573)
Q Consensus 212 ~~~fsp~g~~las~s-~d~~i~iwd~~~~------~~-------~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd 277 (573)
.+.++|||++++.++ .+.++.++|+... +. ....+ -.-.-+..+|.++|.-..|-.-|..|..|+
T Consensus 327 Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 327 GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEEe
Confidence 678999999987655 6889999998731 10 11222 123357789999995444556799999999
Q ss_pred CCC
Q psy2671 278 SST 280 (573)
Q Consensus 278 ~~~ 280 (573)
+..
T Consensus 406 i~~ 408 (638)
T 3sbq_A 406 MEE 408 (638)
T ss_dssp HHH
T ss_pred ccH
Confidence 864
No 344
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=75.22 E-value=57 Score=32.13 Aligned_cols=28 Identities=14% Similarity=0.090 Sum_probs=20.9
Q ss_pred EEEEEEcCCCC-eeEEeeCCCcEEEeecc
Q psy2671 113 VISVKFSPNGR-SLASGSGDTTVRFWDVT 140 (573)
Q Consensus 113 V~~l~~s~~~~-~lat~s~D~~vrvWd~~ 140 (573)
-++|+|.|||. .|+.+...|.|++++..
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 46889999996 44445678999999753
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=73.28 E-value=21 Score=32.91 Aligned_cols=101 Identities=9% Similarity=0.132 Sum_probs=51.8
Q ss_pred EEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC----CC-------cEEEEeCCCCeEEEe--
Q psy2671 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF----DK-------SIKLWDGRIGKFITT-- 497 (573)
Q Consensus 431 ~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~----dg-------~i~lwd~~~~~~~~~-- 497 (573)
.++.|+. .+..||+.+..-....+......-.......++++++.|+. ++ .+..||..+.+....
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 3444443 47888887654322222211111122334567888888883 12 177889887654322
Q ss_pred ecCCcceEEEEEECCCCCEEEEEeCC-------CcEEEEeCCccc
Q psy2671 498 LRGHVQAVYMVAWSSDSRLLVSGSAD-------STLKVWNMKTKK 535 (573)
Q Consensus 498 ~~~h~~~v~~v~~s~dg~~las~s~D-------~~v~vwd~~~~~ 535 (573)
+.........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 96 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 138 (318)
T 2woz_A 96 LPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAK 138 (318)
T ss_dssp BSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTE
T ss_pred CCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCC
Confidence 2111111112222 56777777754 247888887654
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=72.42 E-value=34 Score=35.83 Aligned_cols=136 Identities=9% Similarity=0.136 Sum_probs=69.3
Q ss_pred CCcEEEEEeCC----CeEEEEcCCCCccceee-------eccccccEEEEEECCCCCEEEEeeCCC------cEEEEeCC
Q psy2671 428 EGEKLVSGSDD----FTLFLWNPEKEKKSLAR-------MTGHQQLINCVEFSPDGRIIASASFDK------SIKLWDGR 490 (573)
Q Consensus 428 ~~~~l~sg~~d----g~i~lwd~~~~~~~~~~-------~~~h~~~v~~v~~sp~g~~las~s~dg------~i~lwd~~ 490 (573)
++..++.|+.+ ..+.+||+.+..-.... +......-..+.+..++++++.||.++ .+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 34556666543 35777877654321111 111011112233332788888887653 47889988
Q ss_pred CCeEEEe--ecCCcceEEEEEECCCCCEEEEEeCCC--cEEEEeCCccccc--cc---ccCcCCCEEEEEEccC-CCEEE
Q psy2671 491 IGKFITT--LRGHVQAVYMVAWSSDSRLLVSGSADS--TLKVWNMKTKKIE--QD---LPGHGDEVYAVDWAPD-GEKVA 560 (573)
Q Consensus 491 ~~~~~~~--~~~h~~~v~~v~~s~dg~~las~s~D~--~v~vwd~~~~~~~--~~---l~~h~~~v~~~~~s~d-~~~l~ 560 (573)
+.+.... +......- +++.-.++++++.|+.++ .+.+||+.+.+-. .. ++.......++.+..+ ++.++
T Consensus 477 t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 7653322 21111111 223324788888888655 6899998775421 11 2211111223445554 56677
Q ss_pred EeeC
Q psy2671 561 SGGK 564 (573)
Q Consensus 561 s~~~ 564 (573)
.||.
T Consensus 556 ~GG~ 559 (695)
T 2zwa_A 556 LGGG 559 (695)
T ss_dssp ECCB
T ss_pred ECCc
Confidence 7775
No 347
>4gdk_A Ubiquitin-like protein ATG12; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_A
Probab=71.52 E-value=15 Score=26.67 Aligned_cols=56 Identities=14% Similarity=0.124 Sum_probs=43.1
Q ss_pred cccEEEEEECCC--CCcccCeEEecCCCCHHHHHHHHHHhhcCCCCccEEEEeccccc
Q psy2671 10 TKRILTRFKSDD--GEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEI 65 (573)
Q Consensus 10 ~~~~~~~~~~~~--~~~~~~~~~vp~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~i 65 (573)
.++|.++|.... +......+.||.+.+-.++-.++.+-|..++....-+|+|+...
T Consensus 3 ~~Kv~v~fk~~g~~P~l~k~KflVp~~~tv~~~~~~lRkrL~l~~~~alFlyVnn~~~ 60 (91)
T 4gdk_A 3 KKKIDILLKAVGDTPIMKTKKWAVERTRTIQGLIDFIKKFLKLVASEQLFIYVNQSFA 60 (91)
T ss_dssp -CEEEEEEEECSSSCCCSCCEEEEETTCBHHHHHHHHHHHTTCCSSSCCEEEETTTBC
T ss_pred CceEEEEEEecCCCCcccccEEEcCCCCCHHHHHHHHHHHhCCCCCCeEEEEECCccC
Confidence 368999997532 45668899999999999999999988877666566677877543
No 348
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=68.36 E-value=4.8 Score=44.08 Aligned_cols=36 Identities=22% Similarity=0.182 Sum_probs=31.8
Q ss_pred cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceee
Q psy2671 112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK 147 (573)
Q Consensus 112 ~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~ 147 (573)
.|.+++..++..++.|-+.|+++||||+.+++++..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 567788888999999999999999999999988754
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=67.08 E-value=30 Score=36.29 Aligned_cols=107 Identities=9% Similarity=0.189 Sum_probs=58.0
Q ss_pred CCcEEEEEeCC------CeEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeCCC--cEEEEeCCCCeEEEee
Q psy2671 428 EGEKLVSGSDD------FTLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASFDK--SIKLWDGRIGKFITTL 498 (573)
Q Consensus 428 ~~~~l~sg~~d------g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~dg--~i~lwd~~~~~~~~~~ 498 (573)
++..++.|+.+ ..+.+||+.+..-. +..+.. ...-.+++.-.++++++.||.++ .+.+||..+.+....-
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~-~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH-TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB-CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC-CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 45566666643 24677787654211 111111 11112233334888999998765 6899999887543221
Q ss_pred -----cCCcceEEEEEECCC-CCEEEEEeC--C-----CcEEEEeCCccc
Q psy2671 499 -----RGHVQAVYMVAWSSD-SRLLVSGSA--D-----STLKVWNMKTKK 535 (573)
Q Consensus 499 -----~~h~~~v~~v~~s~d-g~~las~s~--D-----~~v~vwd~~~~~ 535 (573)
........++.+..+ +++++.|+. + +.+..||+.+.+
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 111111123444544 667777765 2 358899987765
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=64.46 E-value=25 Score=38.44 Aligned_cols=38 Identities=21% Similarity=0.171 Sum_probs=33.1
Q ss_pred CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEe
Q psy2671 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC 245 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~ 245 (573)
..+.+++..++..++++-+.|+++|+|++.+++.+.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 46778888889999999999999999999999887654
No 351
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=63.39 E-value=39 Score=31.61 Aligned_cols=49 Identities=8% Similarity=-0.048 Sum_probs=25.3
Q ss_pred CcEEEEeCCCCeEE--EeecCCcceEEEEEECCCCCEEEEEeC------CCcEEEEeC
Q psy2671 482 KSIKLWDGRIGKFI--TTLRGHVQAVYMVAWSSDSRLLVSGSA------DSTLKVWNM 531 (573)
Q Consensus 482 g~i~lwd~~~~~~~--~~~~~h~~~v~~v~~s~dg~~las~s~------D~~v~vwd~ 531 (573)
..+.+||..+.+.. ..+......-.+++. -++++++.|+. ...+..||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEe
Confidence 46889998876533 222211111012222 25667777664 235777876
No 352
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=61.35 E-value=39 Score=31.02 Aligned_cols=110 Identities=11% Similarity=0.035 Sum_probs=58.6
Q ss_pred CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee--CC--CcEEEEeCCCCeEEEeecCCcceEEEEEECCCC
Q psy2671 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS--FD--KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS 514 (573)
Q Consensus 439 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s--~d--g~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg 514 (573)
..|+..++..... ..+.. .. +..|+++++.|+-.. .+ ..|...++.... ...+..+.. .+|++++
T Consensus 88 ~~Iy~i~~dg~~~--~~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g 156 (302)
T 3s25_A 88 NSLCRIKRNGHGS--TVLDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSD 156 (302)
T ss_dssp EEEEEEETTSCCC--EEEEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEET
T ss_pred CeEEEEeCCCCcc--eEeec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEEC
Confidence 4566666654432 11211 11 236788888888665 33 345555655332 233333322 4567888
Q ss_pred CEEEEEeC-CCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEee
Q psy2671 515 RLLVSGSA-DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563 (573)
Q Consensus 515 ~~las~s~-D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~ 563 (573)
+.|+-.+. ...|..-++.++.....+. +... ..++|++++|+-..
T Consensus 157 ~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~ 202 (302)
T 3s25_A 157 RYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMD 202 (302)
T ss_dssp TEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEE
T ss_pred CEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEE
Confidence 88875554 5677777776654332222 2222 23558888776544
No 353
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=60.76 E-value=30 Score=35.24 Aligned_cols=58 Identities=21% Similarity=0.282 Sum_probs=41.8
Q ss_pred EEEEEECCCCCEEEEeeCC------------CcEEEEeCCCCeEEEeecCCc-ceEEEEEECCCCCEEEEE
Q psy2671 463 INCVEFSPDGRIIASASFD------------KSIKLWDGRIGKFITTLRGHV-QAVYMVAWSSDSRLLVSG 520 (573)
Q Consensus 463 v~~v~~sp~g~~las~s~d------------g~i~lwd~~~~~~~~~~~~h~-~~v~~v~~s~dg~~las~ 520 (573)
.--|+|+|.|.+++.-..+ ..+.+.+..+++..+.+.++. ..++.++|+||++.|...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3568999999977764332 235566777787766666653 578999999999987765
No 354
>2jx5_A GLUB(S27A); ubiquitin, ribosome, recombination, evolution, ribosomal protein; NMR {Giardia lamblia atcc 50803}
Probab=59.74 E-value=8.8 Score=24.08 Aligned_cols=41 Identities=17% Similarity=0.340 Sum_probs=29.5
Q ss_pred cEEEEEECCCCCcccCeEEecCCCCHHHHHHHHHHhhcCCCCccEEEEecc
Q psy2671 12 RILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNE 62 (573)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~vp~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ 62 (573)
.|++|+.++ .-||++|.-....+|+.|+..+ ...|.....+
T Consensus 2 lvivrlqdq-----~lpfelpaga~asqls~lls~~-----gm~fslhtqg 42 (69)
T 2jx5_A 2 LVIVRLQDQ-----TLPFELPAGARASQLSNLLSSS-----GMAFSLHTQG 42 (69)
T ss_dssp EEEEEETTE-----EEEEECCTTCCHHHHHHHHHHS-----SCCCEEEETT
T ss_pred eEEEEeccc-----cccccccccccHHHHHHHHhhc-----CceEEEeecc
Confidence 367787765 6799999999999999888753 3445554444
No 355
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=59.31 E-value=47 Score=33.53 Aligned_cols=60 Identities=18% Similarity=0.202 Sum_probs=43.0
Q ss_pred cEEEEEECCCCCEEEEeeC------------CCcEEEEeCCCCeEEEeecCC-cceEEEEEECCCCCEEEEEe
Q psy2671 462 LINCVEFSPDGRIIASASF------------DKSIKLWDGRIGKFITTLRGH-VQAVYMVAWSSDSRLLVSGS 521 (573)
Q Consensus 462 ~v~~v~~sp~g~~las~s~------------dg~i~lwd~~~~~~~~~~~~h-~~~v~~v~~s~dg~~las~s 521 (573)
....|.|+++|.+.++... ...+..++..+++....+.+. ...++.++||||++.|.++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3577999999998774321 125677788788766656543 35689999999999887664
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=59.14 E-value=20 Score=36.56 Aligned_cols=58 Identities=21% Similarity=0.318 Sum_probs=40.6
Q ss_pred EEEEEECCCCCEEEEEeCC------------CcEEEEeCCcccccccccCc-CCCEEEEEEccCCCEEEEe
Q psy2671 505 VYMVAWSSDSRLLVSGSAD------------STLKVWNMKTKKIEQDLPGH-GDEVYAVDWAPDGEKVASG 562 (573)
Q Consensus 505 v~~v~~s~dg~~las~s~D------------~~v~vwd~~~~~~~~~l~~h-~~~v~~~~~s~d~~~l~s~ 562 (573)
.--|+|+|+|.+++.-..+ +.+.+.+..+++..+-+.++ ..+++.+.|+||++.|...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3458899999977654332 23556666777766555544 4689999999999988754
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=56.76 E-value=12 Score=38.94 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=27.8
Q ss_pred cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceee
Q psy2671 112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK 147 (573)
Q Consensus 112 ~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~ 147 (573)
.|.++.+ +..+++|-+.|+++|+||+.++.++..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 4665555 478999999999999999999987643
No 358
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=56.55 E-value=1.3e+02 Score=28.35 Aligned_cols=98 Identities=11% Similarity=0.040 Sum_probs=46.9
Q ss_pred cEEEEEeCCCeEEEEcCCCCccceeee--ccccccEEEEEECC--CCCEEEEeeCCC----cEEEEeC--CCCeEEEe--
Q psy2671 430 EKLVSGSDDFTLFLWNPEKEKKSLARM--TGHQQLINCVEFSP--DGRIIASASFDK----SIKLWDG--RIGKFITT-- 497 (573)
Q Consensus 430 ~~l~sg~~dg~i~lwd~~~~~~~~~~~--~~h~~~v~~v~~sp--~g~~las~s~dg----~i~lwd~--~~~~~~~~-- 497 (573)
..|..|...| +.+++........... ......|.+|+++| ++.+.+.+ ..| .|...+- .+.+.+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s~D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAA-RTGHLGPTVFRSDDGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEE-EC--CCEEEEEESSTTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEe-cCCCCCccEEEeCCCCCCceECCccc
Confidence 3677777777 4444332211111111 11234599999998 55555544 344 3443321 12222211
Q ss_pred -ecC--------CcceEEEEEECCC--CCEEEEEeCCCcEEEE
Q psy2671 498 -LRG--------HVQAVYMVAWSSD--SRLLVSGSADSTLKVW 529 (573)
Q Consensus 498 -~~~--------h~~~v~~v~~s~d--g~~las~s~D~~v~vw 529 (573)
+.. +...|.++++.|. ...|..++..+.|...
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 111 1135788999872 3455555555555544
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=56.54 E-value=5.7 Score=44.63 Aligned_cols=36 Identities=22% Similarity=0.182 Sum_probs=30.5
Q ss_pred cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceee
Q psy2671 112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK 147 (573)
Q Consensus 112 ~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~ 147 (573)
.+.+++..++..++.|-+.|+++||||+.++.++.+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 445566778889999999999999999999988754
No 360
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=48.24 E-value=2.6e+02 Score=29.25 Aligned_cols=340 Identities=12% Similarity=0.101 Sum_probs=169.4
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEE-e---cCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCcee
Q psy2671 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-C---EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284 (573)
Q Consensus 209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~-~---~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~ 284 (573)
.|.++.. .+| .|..|+.+ -+..+|..+++.... . ......|.++...++|...+ |+.+| +..++..+++..
T Consensus 104 ~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~ 178 (758)
T 3ott_A 104 DVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFE 178 (758)
T ss_dssp CEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETTE-EEEEETTTTEEE
T ss_pred eEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceE
Confidence 4666544 345 45556655 577888776543221 0 11234688888888876444 55544 677887665432
Q ss_pred cccccC----CcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCC
Q psy2671 285 GQPMRG----HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR 360 (573)
Q Consensus 285 ~~~~~~----h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~ 360 (573)
...... ....|.++...+ .+..|-.++. +-+..++..+++...........|.++....++.++.|+.+
T Consensus 179 ~~~~~~~~~~~~~~i~~i~~d~-----~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~- 251 (758)
T 3ott_A 179 GIPLPVHSSQSNLFVNSLLEDT-----TRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDN- 251 (758)
T ss_dssp EECCCCCTTCSSCCEEEEEEET-----TTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETT-
T ss_pred EecCCCccccccceeEEEEEEC-----CCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCC-
Confidence 111111 112366665332 2343333443 35777887766543221122345888888888888888854
Q ss_pred eEEEEeCCCCeeeEecc-------CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhh-hhhhh------hheee--
Q psy2671 361 TIKVWRASDGVMCRTLE-------GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEES-SKHAL------AKYQA-- 424 (573)
Q Consensus 361 ~i~vw~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~-- 424 (573)
-+.+++..++....... -....|.++....+..+=+... .+...+........ ..... .....
T Consensus 252 Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 330 (758)
T 3ott_A 252 GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTD-YGISLSRYNSALQFIPISQITGTGDGNQFYSLF 330 (758)
T ss_dssp EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEES-SSEEEECCCC-CEEEEHHHHSCSCCCCBEEEEE
T ss_pred ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeC-CcccccccCCceeEEecccCCCCCCCceEEEEE
Confidence 57778876654322111 0122356665544433222221 22111111110000 00000 00111
Q ss_pred eCCCCcEEEEEeCCCeEEEEcCCCCcc-ceeeec-------cccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE
Q psy2671 425 QCPEGEKLVSGSDDFTLFLWNPEKEKK-SLARMT-------GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496 (573)
Q Consensus 425 ~~~~~~~l~sg~~dg~i~lwd~~~~~~-~~~~~~-------~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~ 496 (573)
...+|. |-.|+.+| +..++..+... ...... -....|.++.-.++|++.+ |+ ++-+..||..+++...
T Consensus 331 ~D~~g~-lWiGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~ 406 (758)
T 3ott_A 331 RDSKGF-YWFGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIH 406 (758)
T ss_dssp ECTTCC-EEEEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEE
T ss_pred EcCCCC-EEEeeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEE
Confidence 112333 34445555 55555443211 111111 0123588998888887655 44 4568899988876432
Q ss_pred ee--cC----CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc-----c-cc--cc---ccC-cCCCEEEEEEccCCCE
Q psy2671 497 TL--RG----HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK-----K-IE--QD---LPG-HGDEVYAVDWAPDGEK 558 (573)
Q Consensus 497 ~~--~~----h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~-----~-~~--~~---l~~-h~~~v~~~~~s~d~~~ 558 (573)
-. .. ....|.++...++|.+. .|+..+-+..+|..+. . .. .. ..+ ....|.++...++|+.
T Consensus 407 ~~~~~~~~~~~~~~v~~i~~d~~g~lW-igT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l 485 (758)
T 3ott_A 407 YNIVDNTGTYNTNWTYYIFEDTAGQLW-ISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNV 485 (758)
T ss_dssp EEEECCC--CBSSSEEEEEECTTSEEE-EEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCE
T ss_pred eecCCCcCCCCCceEEEEEEcCCCCEE-EEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCE
Confidence 11 11 12458888877777654 4665666888886431 1 10 00 011 1235888888888876
Q ss_pred EEE-eeCCC
Q psy2671 559 VAS-GGKDK 566 (573)
Q Consensus 559 l~s-~~~d~ 566 (573)
-+. +...|
T Consensus 486 Wi~~~t~~G 494 (758)
T 3ott_A 486 WVLLYNNKG 494 (758)
T ss_dssp EEEETTCSS
T ss_pred EEEccCCCC
Confidence 552 44444
No 361
>4a20_A Ubiquitin-like protein MDY2; protein binding, GET-pathway, tail-anchored proteins; 1.78A {Saccharomyces cerevisiae} PDB: 2lxc_A 4goc_A
Probab=45.22 E-value=54 Score=24.04 Aligned_cols=44 Identities=14% Similarity=0.075 Sum_probs=28.1
Q ss_pred cccccccccEEEEEECCCCCcccCeEEecCCCCHHHHHHHH-HHh
Q psy2671 4 DDDKITTKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIV-NSL 47 (573)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~l~~~~-~~l 47 (573)
|+|++.+..+.+.+.+-.|+.-.-.++|+.+.+...|.+.+ ...
T Consensus 11 ~~~~~~~~~m~I~VKtl~g~~~~i~v~v~~~~TV~~lK~~I~~~~ 55 (98)
T 4a20_A 11 DDDKMDNAAVHLTLKKIQAPKFSIEHDFSPSDTILQIKQHLISEE 55 (98)
T ss_dssp -------CCEEEEEEECSSSCEEEEEEECTTCBHHHHHHHHHHTT
T ss_pred CcccCCCCCEEEEEEcCCCCEEEEEEecCCCChHHHHHHHHHHHh
Confidence 56677778888888877776444456778999999999988 543
No 362
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=42.79 E-value=43 Score=34.84 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=28.1
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEe
Q psy2671 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC 245 (573)
Q Consensus 209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~ 245 (573)
.|.++.+ +..++++-+.|+++|+|++.+++.+...
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 4555544 4679999999999999999999877654
No 363
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=41.62 E-value=1.3e+02 Score=30.45 Aligned_cols=62 Identities=24% Similarity=0.216 Sum_probs=42.2
Q ss_pred CcEEEEEEcCCCCeEEEEeC------------CCeEEEEECCCCeeeEEecCC-CCcEEEEEEcCCCCeEEEEee
Q psy2671 208 EAVISVKFSPNGRSLASGSG------------DTTVRFWDVTTQTPLFKCEGH-KHWVLCIAWSPDSKQLVSGCK 269 (573)
Q Consensus 208 ~~V~~~~fsp~g~~las~s~------------d~~i~iwd~~~~~~~~~~~~h-~~~V~~v~~s~dg~~l~sgs~ 269 (573)
.....|.|.++|.+.++... ...+..++..+++....+.+. ...++.++|+||++.|+++-.
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 45678999999987663321 125666666666654444443 356899999999999887643
No 364
>3w1s_C Ubiquitin-like protein ATG12; ubiquitin fold, E3-like, ATG3 binding, isopeptide bond betwe Gly186 and ATG5 Lys149, ligase; 2.60A {Saccharomyces cerevisiae S288C}
Probab=40.02 E-value=77 Score=22.87 Aligned_cols=55 Identities=13% Similarity=0.315 Sum_probs=35.7
Q ss_pred ccccccEEEEEECCC--CCcccCeEEecCCCCHHHHHHHHHHhhcCCCCccEEEEecccc
Q psy2671 7 KITTKRILTRFKSDD--GEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETE 64 (573)
Q Consensus 7 ~~~~~~~~~~~~~~~--~~~~~~~~~vp~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~ 64 (573)
.....+|.|||.... +......+.||.+.+-.++-.++.+-|.. + ..-+|+|+..
T Consensus 3 ~~~~~Kv~vrfk~~g~~P~l~k~KflV~~~~t~~~~v~~lRkrL~l-~--alFlyVNn~f 59 (91)
T 3w1s_C 3 HMNIQKIQIKFQPIGSIGQLKPSVCKISMSQSFAMVILFLKRRLKM-D--HVYCYINNSF 59 (91)
T ss_dssp ---CCEEEEEEEECCC-------EEEEETTSBHHHHHHHHHHHHTC-S--CCEEEETTTB
T ss_pred CCCCCeEEEEEEecCCCCcccccEEEcCCCCCHHHHHHHHHHhhCC-c--eEEEEECCcc
Confidence 344678999998542 34567889999999999999999988876 2 3345667643
No 365
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=39.25 E-value=20 Score=40.16 Aligned_cols=37 Identities=22% Similarity=0.168 Sum_probs=31.2
Q ss_pred cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEe
Q psy2671 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC 245 (573)
Q Consensus 209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~ 245 (573)
.+.+++..++..++++-+.|+++|||++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4456667788899999999999999999999887764
No 366
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=36.48 E-value=2.5e+02 Score=25.52 Aligned_cols=88 Identities=8% Similarity=-0.004 Sum_probs=48.4
Q ss_pred EEECCCCCEEEEeeC-CCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCC--cEEEEeCCcccccccccC
Q psy2671 466 VEFSPDGRIIASASF-DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS--TLKVWNMKTKKIEQDLPG 542 (573)
Q Consensus 466 v~~sp~g~~las~s~-dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~--~v~vwd~~~~~~~~~l~~ 542 (573)
.+|+|+++.|.-.+. ...|...++..+.....+.+. .. ..++|++.+|+-...+. .|..-++.+... ..|..
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~---~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt~ 224 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCN---CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLTE 224 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSC---EE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECSC
T ss_pred eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCC---cc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEeC
Confidence 456788888875554 567888887766543334332 22 23568898887655433 344445544432 22321
Q ss_pred cCCCEEEEEEccCCCEEEEe
Q psy2671 543 HGDEVYAVDWAPDGEKVASG 562 (573)
Q Consensus 543 h~~~v~~~~~s~d~~~l~s~ 562 (573)
..+. .|+|++++|.-+
T Consensus 225 --~~~~--~~~~~g~~Iy~~ 240 (302)
T 3s25_A 225 --ANIE--HYNVYGSLIFYQ 240 (302)
T ss_dssp --SCEE--EEEEETTEEEEE
T ss_pred --CCcc--eEEECCCEEEEE
Confidence 2232 356666666543
No 367
>1wz3_A Autophagy 12B, ATG12B, APG12B; ubiquitin-fold, plant protein; 1.80A {Arabidopsis thaliana} SCOP: d.15.1.7
Probab=25.01 E-value=2e+02 Score=20.94 Aligned_cols=50 Identities=12% Similarity=0.242 Sum_probs=38.0
Q ss_pred cccEEEEEECCC--CCcccCeEEecCCCCHHHHHHHHHHhhcCCCCccEEEEecc
Q psy2671 10 TKRILTRFKSDD--GEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNE 62 (573)
Q Consensus 10 ~~~~~~~~~~~~--~~~~~~~~~vp~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ 62 (573)
..+|.|+|.-.. +......+.||.+.+-.++-.++.+-|+.+ .-| +|+|+
T Consensus 11 ~~KV~V~~~~~~~~P~l~k~KflV~~~~t~~~~~~~lRkrL~l~--alF-lyvn~ 62 (96)
T 1wz3_A 11 VQKIVVHLRATGGAPILKQSKFKVSGSDKFANVIDFLRRQLHSD--SLF-VYVNS 62 (96)
T ss_dssp -CEEEEEEEECTTCCCCSCCEEEEETTSBTHHHHHHHHHHHTCS--SCE-EEEEE
T ss_pred CCeEEEEEEECCCCCcccccEEEeCCCCcHHHHHHHHHHhcCCc--eEE-EEECC
Confidence 568999997553 345688999999999999999999888766 233 46666
No 368
>2i1s_A Hypothetical protein; methanosarcina mazei,MAD, PSI-2,MCSG, structural genomics, protein structure initiative; 2.30A {Methanosarcina mazei} SCOP: d.343.1.1
Probab=24.04 E-value=1.4e+02 Score=24.96 Aligned_cols=51 Identities=10% Similarity=0.043 Sum_probs=38.6
Q ss_pred cEEEEEECCCCCcccCeEEecCCCCHHHHHHHHHHhhcCCCCccEEEEeccc
Q psy2671 12 RILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNET 63 (573)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~vp~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 63 (573)
++.|.+...++ ..=..|.||.+++-.+|..+|.....-...-.+.|++.+.
T Consensus 10 ~lrV~L~~~~p-~iWRri~Vp~~~TL~~LH~vIq~afgw~~~HL~~F~~~~~ 60 (188)
T 2i1s_A 10 HLKLSIKGITP-QIWRRIQVPENYTFLDLHKAIQAVMDWEDYHLHEFEMVNP 60 (188)
T ss_dssp EEEEEETTCSS-CEEEEEEEETTCBHHHHHHHHHHHTTCCCCSCEEEEEECT
T ss_pred EEEEEECCCCC-CeEEEEEECCCCCHHHHHHHHHHHhCCCCCEeeEEEECCC
Confidence 55555543332 2468899999999999999999888766667788998765
No 369
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=22.00 E-value=4.6e+02 Score=24.04 Aligned_cols=112 Identities=11% Similarity=0.083 Sum_probs=0.0
Q ss_pred eccccccEEEEEECC--CCCEEEEeeCCCcEEEEeCCC-------CeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcE
Q psy2671 456 MTGHQQLINCVEFSP--DGRIIASASFDKSIKLWDGRI-------GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTL 526 (573)
Q Consensus 456 ~~~h~~~v~~v~~sp--~g~~las~s~dg~i~lwd~~~-------~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v 526 (573)
+......+..+.+.+ +...++..+.+|.++--.+.. |.....++. ...+..+........|+..+..|.+
T Consensus 91 l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~ 169 (327)
T 3uc1_A 91 FQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQS 169 (327)
T ss_dssp CCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEE
T ss_pred CCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeE
Q ss_pred EEEeCC-----------cccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEE
Q psy2671 527 KVWNMK-----------TKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLR 569 (573)
Q Consensus 527 ~vwd~~-----------~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~ 569 (573)
..+... .|...-.|. ..+.|.++...+++.+|+.++..|.++
T Consensus 170 ~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~K 222 (327)
T 3uc1_A 170 IRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAK 222 (327)
T ss_dssp EEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEE
T ss_pred EEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEE
Done!