Your job contains 1 sequence.
>psy2671
MEVDDDKITTKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYV
NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP
NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEV
VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT
PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSW
EPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR
TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA
KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF
DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL
PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2671
(573 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 1532 3.3e-157 1
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 1527 1.1e-156 1
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 1527 1.1e-156 1
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 1526 1.4e-156 1
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 1526 1.4e-156 1
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 1525 1.8e-156 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 1479 1.4e-151 1
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 1434 8.1e-147 1
WB|WBGene00021074 - symbol:W07E6.2 species:6239 "Caenorha... 1383 2.1e-141 1
TAIR|locus:2176897 - symbol:AT5G52820 "AT5G52820" species... 1364 2.1e-139 1
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 1319 1.2e-134 1
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 1177 1.4e-119 1
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 1109 2.2e-112 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 1086 6.1e-110 1
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 1015 2.0e-102 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 606 3.6e-60 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 399 2.9e-45 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 460 5.0e-42 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 343 4.4e-36 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 343 4.4e-36 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 343 4.4e-36 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 343 4.4e-36 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 343 4.4e-36 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 343 4.4e-36 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 346 6.0e-35 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 361 7.3e-35 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 353 8.2e-32 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 322 2.3e-28 1
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 238 5.6e-28 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 317 8.1e-28 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 317 8.1e-28 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 330 8.9e-28 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 315 1.3e-27 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 315 1.3e-27 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 314 1.7e-27 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 313 2.2e-27 1
ASPGD|ASPL0000046644 - symbol:AN2021 species:162425 "Emer... 339 2.5e-27 1
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 335 2.7e-27 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 312 2.9e-27 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 312 2.9e-27 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 330 3.8e-27 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 310 4.7e-27 1
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 333 6.9e-27 1
DICTYBASE|DDB_G0293070 - symbol:DDB_G0293070 "TROVE domai... 351 7.1e-27 2
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 312 7.7e-27 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 308 7.9e-27 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 241 9.6e-27 3
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 312 9.7e-27 2
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 306 1.3e-26 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 312 1.5e-26 2
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 312 1.5e-26 2
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 312 2.9e-26 2
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 312 3.0e-26 2
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 317 3.9e-26 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 310 6.7e-26 2
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 309 7.0e-26 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 298 9.9e-26 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 238 1.0e-25 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 235 1.2e-25 3
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 296 1.6e-25 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 295 2.1e-25 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 295 2.1e-25 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 295 2.1e-25 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 295 2.1e-25 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 297 2.5e-25 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 239 3.1e-25 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 238 3.1e-25 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 238 3.1e-25 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 238 3.1e-25 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 238 3.1e-25 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 238 3.1e-25 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 238 3.1e-25 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 238 3.1e-25 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 238 3.1e-25 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 238 4.1e-25 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 292 4.5e-25 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 292 4.5e-25 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 291 5.7e-25 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 230 7.3e-25 2
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 236 8.4e-25 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 294 1.9e-24 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 293 3.1e-24 1
UNIPROTKB|F1SQT5 - symbol:APAF1 "Uncharacterized protein"... 319 4.6e-24 2
UNIPROTKB|B8YE10 - symbol:TBL1Y "Transducin (Beta)-like 1... 299 8.7e-24 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 290 9.6e-24 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 291 1.2e-23 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 296 1.2e-23 1
UNIPROTKB|J9NS21 - symbol:APAF1 "Apoptotic protease-activ... 306 1.3e-23 2
UNIPROTKB|E1C9D6 - symbol:GNB3 "Uncharacterized protein" ... 249 1.5e-23 2
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 277 1.9e-23 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 277 1.9e-23 1
CGD|CAL0000293 - symbol:UTP13 species:5476 "Candida albic... 198 2.4e-23 2
UNIPROTKB|Q5AGB1 - symbol:CaO19.11744 "Putative uncharact... 198 2.4e-23 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 290 6.2e-23 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 289 8.0e-23 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 271 8.7e-23 1
UNIPROTKB|F1NM37 - symbol:TBL3 "Uncharacterized protein" ... 294 1.1e-22 1
UNIPROTKB|F1Q410 - symbol:APAF1 "Apoptotic protease-activ... 297 1.3e-22 2
UNIPROTKB|Q2KJJ5 - symbol:TBL3 "Transducin beta-like prot... 206 1.4e-22 2
UNIPROTKB|F1MNS4 - symbol:TBL3 "Transducin beta-like prot... 206 1.4e-22 2
WARNING: Descriptions of 1776 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 1532 (544.3 bits), Expect = 3.3e-157, P = 3.3e-157
Identities = 286/469 (60%), Positives = 348/469 (74%)
Query: 116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT-------PYLFYVNETEITKTLAD 168
V+F G L D V D+T C P FYV++ EI +L
Sbjct: 19 VQFQDEGGQLLGSPFDVPV---DITPDKLQLVCNALLAQEDPLPLAFYVHDAEIISSLGK 75
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
L + TE+V+DI+YQ QAVF+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSGD
Sbjct: 76 TLESQAVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGD 135
Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
TTVRFWD++T+TP F C+GH+HWVL I+WSPD K+L SGCKNG I WD STGKQ+G+ +
Sbjct: 136 TTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRAL 195
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
GH +WITALSWEP H N +CR ASS KDG++R+WD +C R+LT HT+SVTC+RWG
Sbjct: 196 AGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG 255
Query: 349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408
G GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTDY +R A +
Sbjct: 256 GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNA 315
Query: 409 ----ANPEESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
+ +E + AL++Y G E+LVSGSDDFTLFLW+P ++KK LARMTGHQ LI
Sbjct: 316 QDLRGSLQELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALI 375
Query: 464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD 523
N V FSPD RIIASASFDKSIKLWDGR GK++ +LRGHV AVY +AWS+DSRLLVSGS+D
Sbjct: 376 NQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSD 435
Query: 524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
STLKVW++K +K+ DLPGH DEVYAVDW+PDG++VASGGKDK LR+W+
Sbjct: 436 STLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 159/494 (32%), Positives = 255/494 (51%)
Query: 11 KRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTLA 70
+R+L +F+ + G++ G D+P+++ + L L+ N+LL Q++ P FYV++ EI +L
Sbjct: 15 QRLLVQFQDEGGQLLGSPFDVPVDITPDKLQLVCNALLAQEDPLPLAFYVHDAEIISSLG 74
Query: 71 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 130
L + TE+V+DI+YQ QAVF+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSG
Sbjct: 75 KTLESQAVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSG 134
Query: 131 DTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQA 189
DTTVRFWD++T+TP F C+G ++ ++ + K LA ++ +++
Sbjct: 135 DTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLAS-----GCKNGQI--LLWDPST 187
Query: 190 VFQVRPVTRCTSSMPGHAEAVISVKF-----SPNGRSLASGSGDTTVRFWDVTTQTPLFK 244
QV ++ GH++ + ++ + +P R +AS S D +VR WD T +
Sbjct: 188 GKQVG------RALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAG----R 237
Query: 245 CE----GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSW 300
CE GH V C+ W D L S ++ I W + G + + ++GH W+ ++
Sbjct: 238 CERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGV-LCRTLQGHGHWVNTMA- 294
Query: 301 EPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS-VTCIRWGGSGLIYSASQD 359
++ R A + ++ D L ++ L S +R G + S S D
Sbjct: 295 --LSTDYALRTGAFEPAEASVNAQD--LRGSLQELKERALSRYNLVRGRGLERLVSGSDD 350
Query: 360 RTIKVWR-ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSK- 416
T+ +W A D + GH +N + S D + A+ K +D + +
Sbjct: 351 FTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASL 410
Query: 417 --HALAKYQ-AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR 473
H A YQ A + LVSGS D TL +W+ K +K A + GH + V++SPDG+
Sbjct: 411 RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV-KAQKLAADLPGHADEVYAVDWSPDGQ 469
Query: 474 IIASASFDKSIKLW 487
+AS DK +++W
Sbjct: 470 RVASGGKDKCLRIW 483
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 1527 (542.6 bits), Expect = 1.1e-156, P = 1.1e-156
Identities = 284/469 (60%), Positives = 351/469 (74%)
Query: 116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-------EGTPYLFYVNETEITKTLAD 168
V+F G L D V D+T C E P FYV++ EI +L
Sbjct: 21 VQFQDEGGQLLGSPFDVPV---DITPDQLQLVCNALLAQDEPLPLAFYVHDAEIVSSLGK 77
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
L ++ TE++VDI+YQ QAVF+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSGD
Sbjct: 78 TLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGD 137
Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
TTVRFWD++T+TP F C+GH+HWVL I+WSPD K+L SGCKNG I WD STG Q+G+ +
Sbjct: 138 TTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTL 197
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
GH +WIT LSWEP H+N +CR ASS KDG++R+WD +C R+LT HT+SVTC+RWG
Sbjct: 198 TGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG 257
Query: 349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV----EATSTGGF 404
G GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTDY +R A +T
Sbjct: 258 GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNA 317
Query: 405 KYDPANPEESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
+ + +E + A ++Y +G E+LVSGSDDFTLFLW+P ++KK LARMTGHQ LI
Sbjct: 318 QDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALI 377
Query: 464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD 523
N V FSPD RI+ASASFDKSIKLWDGR GK++ +LRGHV AVY +AWS+DSRLLVSGS+D
Sbjct: 378 NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSD 437
Query: 524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
STLKVW++K +K+ DLPGH DEVYAVDW+PDG++VASGGKDK LR+W+
Sbjct: 438 STLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 486
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 164/502 (32%), Positives = 259/502 (51%)
Query: 1 MEVDDDKITT--KRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLF 58
+EV D+ + +R+L +F+ + G++ G D+P+++ + L L+ N+LL QDE P F
Sbjct: 5 VEVSDEAAASDVQRLLVQFQDEGGQLLGSPFDVPVDITPDQLQLVCNALLAQDEPLPLAF 64
Query: 59 YVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKF 118
YV++ EI +L L ++ TE++VDI+YQ QAVF+VR VTRCTSS+ GH+EAVISV F
Sbjct: 65 YVHDAEIVSSLGKTLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAF 124
Query: 119 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTLADVLPLDTLNT 177
SP G+ LASGSGDTTVRFWD++T+TP F C+G ++ ++ + K LA
Sbjct: 125 SPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLAS-----GCKN 179
Query: 178 EEVVDIVYQKQAVFQV-RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 236
++ +++ QV R +T + + G + + + +P R +AS S D +VR WD
Sbjct: 180 GQI--LLWDPSTGTQVGRTLTGHSKWITGLSWEPLHM--NPECRYVASSSKDGSVRVWDT 235
Query: 237 TTQTPLFKCE----GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHK 292
T +CE GH V C+ W D L S ++ I W + G + + ++GH
Sbjct: 236 TAG----RCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGV-LCRTLQGHG 289
Query: 293 QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS-VTCIRWGGSG 351
W+ ++ ++ R A + + D L ++ L S +R G
Sbjct: 290 HWVNTMA---LSTDYALRTGAFEPAEATVNAQD--LQGSLKELKERASSRYNLVRGQGPE 344
Query: 352 LIYSASQDRTIKVWR-ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPA 409
+ S S D T+ +W A D + GH +N + S D + A+ K +D
Sbjct: 345 RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGR 404
Query: 410 NPEESSK---HALAKYQ-AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINC 465
+ + H A YQ A + LVSGS D TL +W+ K +K + GH +
Sbjct: 405 TGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV-KAQKLTTDLPGHADEVYA 463
Query: 466 VEFSPDGRIIASASFDKSIKLW 487
V++SPDG+ +AS DK +++W
Sbjct: 464 VDWSPDGQRVASGGKDKCLRIW 485
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 1527 (542.6 bits), Expect = 1.1e-156, P = 1.1e-156
Identities = 282/469 (60%), Positives = 348/469 (74%)
Query: 116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT-------PYLFYVNETEITKTLAD 168
V+F G L D V D+T C P F+V++ EI +L
Sbjct: 19 VQFQDEGGQLLGSPFDVPV---DITPDRLQLVCNALLAQEDPLPLAFFVHDAEIVSSLGK 75
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
L + TE+V+DI+YQ QA+F+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSGD
Sbjct: 76 TLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGD 135
Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
TTVRFWD++T+TP F C+GH+HWVL I+WSPD ++L SGCKNG I WD STGKQ+G+ +
Sbjct: 136 TTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTL 195
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
GH +WIT LSWEP H N +CR ASS KDG++RIWD +C R+LT HT+SVTC+RWG
Sbjct: 196 AGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWG 255
Query: 349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408
G GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTDY +R A +P
Sbjct: 256 GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNP 315
Query: 409 ----ANPEESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
+ +E + AL++Y +G E+LVSGSDDFTLFLW+P ++KK L RMTGHQ LI
Sbjct: 316 QDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALI 375
Query: 464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD 523
N V FSPD RI+ASASFDKSIKLWDGR GK++ +LRGHV AVY +AWS+DSRLLVSGS+D
Sbjct: 376 NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSD 435
Query: 524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
STLKVW++K +K+ DLPGH DEVYAVDW+PDG++VASGGKDK LR+W+
Sbjct: 436 STLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 156/504 (30%), Positives = 259/504 (51%)
Query: 3 VDDDKIT--TKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYV 60
V D+ + +R+L +F+ + G++ G D+P+++ + L L+ N+LL Q++ P F+V
Sbjct: 5 VPDEAVARDVQRLLVQFQDEGGQLLGSPFDVPVDITPDRLQLVCNALLAQEDPLPLAFFV 64
Query: 61 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 120
++ EI +L L + TE+V+DI+YQ QA+F+VR VTRCTSS+ GH+EAVISV FSP
Sbjct: 65 HDAEIVSSLGKTLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSP 124
Query: 121 NGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTLADVLPLDTLNTEE 179
G+ LASGSGDTTVRFWD++T+TP F C+G ++ ++ + + LA +
Sbjct: 125 TGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLAS-----GCKNGQ 179
Query: 180 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKF-----SPNGRSLASGSGDTTVRFW 234
+ +++ QV ++ GH++ + + + +P R +AS S D +VR W
Sbjct: 180 I--LLWDPSTGKQVG------RTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIW 231
Query: 235 DVTTQTPLFKCE----GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRG 290
D T +CE GH V C+ W D L S ++ I W + G + + ++G
Sbjct: 232 DTTAG----RCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGV-LCRTLQG 285
Query: 291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS-VTCIRWGG 349
H W+ ++ ++ R A + ++ D L ++ L S +R G
Sbjct: 286 HGHWVNTMA---LSTDYALRTGAFEPAEASVNPQD--LQGSLQELKERALSRYNLVRGQG 340
Query: 350 SGLIYSASQDRTIKVWR-ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YD 407
+ S S D T+ +W A D + GH +N + S D + A+ K +D
Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWD 400
Query: 408 PANPEESSK---HALAKYQ-AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
+ + H A YQ A + LVSGS D TL +W+ + +K ++ + GH +
Sbjct: 401 GRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMD-LPGHADEV 459
Query: 464 NCVEFSPDGRIIASASFDKSIKLW 487
V++SPDG+ +AS DK +++W
Sbjct: 460 YAVDWSPDGQRVASGGKDKCLRIW 483
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 1526 (542.2 bits), Expect = 1.4e-156, P = 1.4e-156
Identities = 283/469 (60%), Positives = 347/469 (73%)
Query: 116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT-------PYLFYVNETEITKTLAD 168
V+F G L D V D+T C P FYV++ EI +L
Sbjct: 20 VQFQDEGGQLLGSPFDVPV---DITPDKLQLVCNALLAQEDPLPLAFYVHDAEIVSSLGR 76
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
L + TE+V+DI+YQ QA+F+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSGD
Sbjct: 77 TLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGD 136
Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
TTVRFWD++T+TP F C+GH+HWVL I+WSPD K+L SGCKNG I WD STGKQ+G+ +
Sbjct: 137 TTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRAL 196
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
GH +WITALSWEP H N +CR ASS KDG++R+WD +C R LT H +SVTC+RWG
Sbjct: 197 TGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWG 256
Query: 349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408
G GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTDY +R A +
Sbjct: 257 GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNA 316
Query: 409 ----ANPEESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
+ +E + AL++Y +G E+LVSGSDDFTLFLW+P ++KK LARMTGHQ LI
Sbjct: 317 QDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALI 376
Query: 464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD 523
N V FSPD R+IASASFDKSIKLWDGR GK++ +LRGHV AVY +AWS+DSRLLVSGS+D
Sbjct: 377 NQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSD 436
Query: 524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
STLKVW++K +K+ DLPGH DEVYAVDW+PDG++VASGGKDK LR+W+
Sbjct: 437 STLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 485
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 155/490 (31%), Positives = 252/490 (51%)
Query: 11 KRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTLA 70
+R+L +F+ + G++ G D+P+++ + L L+ N+LL Q++ P FYV++ EI +L
Sbjct: 16 QRLLVQFQDEGGQLLGSPFDVPVDITPDKLQLVCNALLAQEDPLPLAFYVHDAEIVSSLG 75
Query: 71 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 130
L + TE+V+DI+YQ QA+F+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSG
Sbjct: 76 RTLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSG 135
Query: 131 DTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQA 189
DTTVRFWD++T+TP F C+G ++ ++ + K LA ++ +++
Sbjct: 136 DTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLAS-----GCKNGQI--LLWDPST 188
Query: 190 VFQVRPVTRCTSSMPGHAEAVISVKF-----SPNGRSLASGSGDTTVRFWDVTTQTPLFK 244
QV ++ GH++ + ++ + +P R +AS S D +VR WD T
Sbjct: 189 GKQVG------RALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERT 242
Query: 245 CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304
GH V C+ W D L S ++ I W + G + + ++GH W+ ++
Sbjct: 243 LTGHAQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGV-LCRTLQGHGHWVNTMA---LS 297
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS-VTCIRWGGSGLIYSASQDRTIK 363
++ R A + ++ D L ++ L S +R G + S S D T+
Sbjct: 298 TDYALRTGAFEPAEASVNAQD--LRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLF 355
Query: 364 VWR-ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSK---HA 418
+W A D + GH +N + S D + A+ K +D + + H
Sbjct: 356 LWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHV 415
Query: 419 LAKYQ-AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS 477
A YQ A + LVSGS D TL +W+ + +K S + GH + V++SPDG+ +AS
Sbjct: 416 AAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLS-TDLPGHADEVYAVDWSPDGQRVAS 474
Query: 478 ASFDKSIKLW 487
DK +++W
Sbjct: 475 GGKDKCLRIW 484
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 1526 (542.2 bits), Expect = 1.4e-156, P = 1.4e-156
Identities = 275/426 (64%), Positives = 335/426 (78%)
Query: 152 PYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVI 211
P FYV++ EIT +L L + TE+V+DI+YQ QA+F+VR VTRCTSS+ GH+EAVI
Sbjct: 10 PLAFYVHDAEITSSLGKTLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVI 69
Query: 212 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG 271
SV FSP G+ LASGSGDTTVRFWD++T+TP F C+GH+HWVL I+WSPD K L SGCKNG
Sbjct: 70 SVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLASGCKNG 129
Query: 272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC 331
I WD STGKQ+G+ + GH +WIT LSWEP H N +CR ASS KDG++R+WD +C
Sbjct: 130 QILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRC 189
Query: 332 VRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
R+LT HT+SVTC+RWGG GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTD
Sbjct: 190 ERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 249
Query: 392 YLMRVEATSTGGFKYDP----ANPEESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNP 446
Y +R A + + +E AL +Y +G E+LVSGSDDFTLF+W+P
Sbjct: 250 YALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSP 309
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
++KK LARMTGHQ LIN V FSPD RIIASASFDKSIKLWDGR GK++ +LRGHV AVY
Sbjct: 310 AEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVY 369
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
+AWS+DSRLLVSGS+DSTLKVW++K +K+ DLPGH DEVYAVDW+PDG++VASGGKDK
Sbjct: 370 QIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDK 429
Query: 567 VLRLWQ 572
LR+W+
Sbjct: 430 CLRIWR 435
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 150/455 (32%), Positives = 230/455 (50%)
Query: 50 QDEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGH 109
Q++ P FYV++ EIT +L L + TE+V+DI+YQ QA+F+VR VTRCTSS+ GH
Sbjct: 5 QEDPLPLAFYVHDAEITSSLGKTLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGH 64
Query: 110 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTLAD 168
+EAVISV FSP G+ LASGSGDTTVRFWD++T+TP F C+G ++ ++ + KTLA
Sbjct: 65 SEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLAS 124
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKF-----SPNGRSLA 223
++ +++ QV V + GH++ + + + +P R +A
Sbjct: 125 -----GCKNGQI--LLWDPSTGKQVGRV------LAGHSKWITGLSWEPLHANPECRYMA 171
Query: 224 SGSGDTTVRFWDVTTQTPLFKCE----GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
S S D +VR WD T +CE GH V C+ W D L S ++ I W +
Sbjct: 172 SSSKDGSVRVWDTTAG----RCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAH 226
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT 339
G + + ++GH W+ ++ ++ R A + +I D L ++ L
Sbjct: 227 DGV-LCRTLQGHGHWVNTMA---LSTDYALRTGAFEPAEASINAQD--LQGSLQELKDRA 280
Query: 340 -RSVTCIRWGGSGLIYSASQDRTIKVWR-ASDGVMCRTLEGHAHWVNTLALSTDYLMRVE 397
R +R G + S S D T+ +W A D + GH +N + S D +
Sbjct: 281 LRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIAS 340
Query: 398 ATSTGGFK-YDPANPEESSK---HALAKYQ-AQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
A+ K +D + + H A YQ A + LVSGS D TL +W+ K +K
Sbjct: 341 ASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV-KAQKL 399
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
A + GH + V++SPDG+ +AS DK +++W
Sbjct: 400 AADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 1525 (541.9 bits), Expect = 1.8e-156, P = 1.8e-156
Identities = 283/469 (60%), Positives = 351/469 (74%)
Query: 116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-------EGTPYLFYVNETEITKTLAD 168
V+F G L D V D+T C E P FYV++ EI +L
Sbjct: 19 VQFQDEGGQLLGSPFDVPV---DITPDKLQLVCNALLAQEEPLPLAFYVHDAEIVSSLGK 75
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
L ++ TE++VDI+YQ QAVF+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSGD
Sbjct: 76 TLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGD 135
Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
TTVRFWD++T+TP F C+GH+HWVL I+WSPD K+L SGCKNG + WD STG Q+G+ +
Sbjct: 136 TTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTL 195
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
GH +WIT LSWEP H+N +CR ASS KDG++R+WD +C R+LT HT+SVTC+RWG
Sbjct: 196 TGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG 255
Query: 349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV----EATSTGGF 404
G GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTDY +R A +T
Sbjct: 256 GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNA 315
Query: 405 KYDPANPEESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
+ + +E + A ++Y +G E+LVSGSDDFTLFLW+P ++KK LARMTGHQ LI
Sbjct: 316 QDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALI 375
Query: 464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD 523
N V FSPD RI+ASASFDKSIKLWDGR GK++ +LRGHV AVY +AWS+DSRLLVSGS+D
Sbjct: 376 NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSD 435
Query: 524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
STLKVW++K +K+ DLPGH DEVYAVDW+PDG++VASGGKDK LR+W+
Sbjct: 436 STLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 161/490 (32%), Positives = 253/490 (51%)
Query: 11 KRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTLA 70
+R+L +F+ + G++ G D+P+++ + L L+ N+LL Q+E P FYV++ EI +L
Sbjct: 15 QRLLVQFQDEGGQLLGSPFDVPVDITPDKLQLVCNALLAQEEPLPLAFYVHDAEIVSSLG 74
Query: 71 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 130
L ++ TE++VDI+YQ QAVF+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSG
Sbjct: 75 KTLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSG 134
Query: 131 DTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQA 189
DTTVRFWD++T+TP F C+G ++ ++ + K LA +V +++
Sbjct: 135 DTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLAS-----GCKNGQV--LLWDPST 187
Query: 190 VFQV-RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE-- 246
QV R +T + + G + + + +P R +AS S D +VR WD T +CE
Sbjct: 188 GLQVGRTLTGHSKWITGLSWEPLHM--NPECRYVASSSKDGSVRVWDTTAG----RCERI 241
Query: 247 --GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304
GH V C+ W D L S ++ I W + G + + ++GH W+ ++
Sbjct: 242 LTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGV-LCRTLQGHGHWVNTMA---LS 296
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS-VTCIRWGGSGLIYSASQDRTIK 363
++ R A + + D L ++ L S +R G + S S D T+
Sbjct: 297 TDYALRTGAFEPAEATVNAQD--LQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLF 354
Query: 364 VWR-ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSK---HA 418
+W A D + GH +N + S D + A+ K +D + + H
Sbjct: 355 LWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHV 414
Query: 419 LAKYQ-AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS 477
A YQ A + LVSGS D TL +W+ K +K + GH + V++SPDG+ +AS
Sbjct: 415 AAVYQIAWSADSRLLVSGSSDSTLKVWDV-KAQKLATDLPGHADEVYAVDWSPDGQRVAS 473
Query: 478 ASFDKSIKLW 487
DK +++W
Sbjct: 474 GGKDKCLRIW 483
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 1479 (525.7 bits), Expect = 1.4e-151, P = 1.4e-151
Identities = 267/429 (62%), Positives = 332/429 (77%)
Query: 149 EGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAE 208
E P F+ ++ EI +L L + TE+V+DI+YQ QAVF+VR VTRCTSS+ GH E
Sbjct: 69 EPVPLAFFFHDAEIVVSLEKTLAGQAVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHTE 128
Query: 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC 268
AVISV FSP G+ LASGSGDTTVRFWD++T+TP F +GH+HWVL IAWSPD K+L SGC
Sbjct: 129 AVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGC 188
Query: 269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
KN I WD +TG QIG+ + GH +WIT L WEP H+N +CR AS+ KDG+IRIWD ++
Sbjct: 189 KNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLM 248
Query: 329 SQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
+C ++LT HT+SVTC++WGG GL+YS+SQDRTIKVWR+ DG++CRTL+GHAHWVNT+AL
Sbjct: 249 GRCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMAL 308
Query: 389 STDYLMRVEATSTGGFKYDPANPE----ESSKHALAKYQAQCPEG-EKLVSGSDDFTLFL 443
STDY++R A +P + E A +Y +G E+LVSGSDDFTLFL
Sbjct: 309 STDYVLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFL 368
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W P ++KK L RMTGHQ LIN V FSPD RIIASASFDKSIKLW+GR GK++T+LRGHV
Sbjct: 369 WRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVS 428
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
AVY +AWS+DSRLLVSGS+DSTLKVW+ +TKK+ DLPGH DEV+A DW+PDG++VASGG
Sbjct: 429 AVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGG 488
Query: 564 KDKVLRLWQ 572
KDK LR+W+
Sbjct: 489 KDKCLRIWR 497
Score = 395 (144.1 bits), Expect = 2.7e-42, Sum P(2) = 2.7e-42
Identities = 77/150 (51%), Positives = 105/150 (70%)
Query: 1 MEVDDDKITTKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYV 60
ME +D +R+L +F+ + GE G D+P+++ + L L+ N+LLQQDE P F+
Sbjct: 21 MEPTED---VERLLIQFRDEAGEPLGSPFDVPVSITPDKLQLVCNALLQQDEPVPLAFFF 77
Query: 61 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 120
++ EI +L L + TE+V+DI+YQ QAVF+VR VTRCTSS+ GH EAVISV FSP
Sbjct: 78 HDAEIVVSLEKTLAGQAVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHTEAVISVAFSP 137
Query: 121 NGRSLASGSGDTTVRFWDVTTQTPLFKCEG 150
G+ LASGSGDTTVRFWD++T+TP F +G
Sbjct: 138 TGKYLASGSGDTTVRFWDLSTETPQFTAKG 167
Score = 121 (47.7 bits), Expect = 0.00045, P = 0.00045
Identities = 37/129 (28%), Positives = 59/129 (45%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
M GH + V FSP+ R +AS S D +++ W+ T L G Y
Sbjct: 381 MTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSR 440
Query: 166 LADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG 225
L ++ + +T +V D +K A+ +PGHA+ V + +SP+G+ +ASG
Sbjct: 441 L--LVSGSSDSTLKVWDAETKKLAI-----------DLPGHADEVFATDWSPDGQRVASG 487
Query: 226 SGDTTVRFW 234
D +R W
Sbjct: 488 GKDKCLRIW 496
Score = 70 (29.7 bits), Expect = 2.7e-42, Sum P(2) = 2.7e-42
Identities = 39/186 (20%), Positives = 76/186 (40%)
Query: 119 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTE 178
+P R LAS S D ++R WD T + +C+ + K D L L + + +
Sbjct: 226 NPECRYLASASKDGSIRIWD----TLMGRCDKI-LTGHTQSVTCVKWGGDGL-LYSSSQD 279
Query: 179 EVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNG--RSLASGSGDTTVRFWDV 236
+ + + + C + + GHA V ++ S + R+ A + T+ D+
Sbjct: 280 RTIKVWRSQDGIL-------CRT-LQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDM 331
Query: 237 TTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWIT 296
+ K + + + P+ +LVSG + + W + K+ + M GH+ I
Sbjct: 332 SGSLAELKDKAQQRYDKVRGQGPE--RLVSGSDDFTLFLWRPAEDKKPLERMTGHQALIN 389
Query: 297 ALSWEP 302
+ + P
Sbjct: 390 QVLFSP 395
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 1434 (509.9 bits), Expect = 8.1e-147, P = 8.1e-147
Identities = 257/427 (60%), Positives = 328/427 (76%)
Query: 149 EGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAE 208
E TPYLF+V E EI K+L D L L +++TE V+DIVYQ QAVF+VRPVTRCTSSMPGHAE
Sbjct: 61 EATPYLFFVGEDEIKKSLEDTLDLASVDTENVIDIVYQPQAVFKVRPVTRCTSSMPGHAE 120
Query: 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC 268
AV+S+ FSP+G LASGSGDTTVR WD+ T+TP F C GHK WVLC++W+PD K+L SGC
Sbjct: 121 AVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRLASGC 180
Query: 269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
K G I WD TG+Q G+P+ GHK+ I L+WEP+H + +CR+ AS+ DG RIWDV L
Sbjct: 181 KAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKL 240
Query: 329 SQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
QC+ + HT +VT +RWGG+GLIY++S+DRT+K+WRA+DG++CRT GHAHWVN +AL
Sbjct: 241 GQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIAL 300
Query: 389 STDYLMRV---EATSTGGFKYDPANPEESSKHALAKYQAQCP-EGEKLVSGSDDFTLFLW 444
STDY++R + + EE + AL +YQA CP E E LVS SDD TL+LW
Sbjct: 301 STDYVLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLW 360
Query: 445 NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
+ K + RMTGHQ ++N V++SPD ++IASASFDKS++LW G+++ T RGHVQA
Sbjct: 361 R-NNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQA 419
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK 564
VY VAWS+DSRL+VSGS DSTLKVW+++TKK+ Q+LPGH DEV+ VDWAPDG +VASGGK
Sbjct: 420 VYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGK 479
Query: 565 DKVLRLW 571
DKV++LW
Sbjct: 480 DKVIKLW 486
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 172/502 (34%), Positives = 247/502 (49%)
Query: 2 EVD-DDKITTKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYV 60
E D + + T I R SD GE AG +DLP + T+ L LI N+LL+ +E TPYLF+V
Sbjct: 10 ETDTEQEATPHTIQARLVSDTGEEAGPPIDLPAGITTQQLGLICNALLKNEEATPYLFFV 69
Query: 61 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 120
E EI K+L D L L +++TE V+DIVYQ QAVF+VRPVTRCTSSMPGHAEAV+S+ FSP
Sbjct: 70 GEDEIKKSLEDTLDLASVDTENVIDIVYQPQAVFKVRPVTRCTSSMPGHAEAVVSLNFSP 129
Query: 121 NGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTLADVLPLDTLNTEE 179
+G LASGSGDTTVR WD+ T+TP F C G ++ V+ K LA ++ +
Sbjct: 130 DGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSIIIWD 189
Query: 180 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ 239
+ + + + C + P H + P R LAS SGD R WDV
Sbjct: 190 PETGQQKGRPLSGHKKHINCLAWEPYHRD--------PECRKLASASGDGDCRIWDVKLG 241
Query: 240 TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWIT--A 297
L GH + V + W + + + K+ + W ++ G + + GH W+ A
Sbjct: 242 QCLMNIAGHTNAVTAVRWG-GAGLIYTSSKDRTVKMWRAADGI-LCRTFSGHAHWVNNIA 299
Query: 298 LSWE------PFH-LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS 350
LS + PFH + + + S + + + L + V S+
Sbjct: 300 LSTDYVLRTGPFHPVKDRSKSHLSLSTE---ELQESALKRYQAVCPDEVESLV------- 349
Query: 351 GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPAN 410
S S D T+ +WR + + GH + VN + S D + A+ + A+
Sbjct: 350 ----SCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRAS 405
Query: 411 PEESSK----HALAKYQ-AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINC 465
+ H A Y A + +VSGS D TL +W+ + KK + GH +
Sbjct: 406 DGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQT-KKLAQELPGHADEVFG 464
Query: 466 VEFSPDGRIIASASFDKSIKLW 487
V+++PDG +AS DK IKLW
Sbjct: 465 VDWAPDGSRVASGGKDKVIKLW 486
Score = 174 (66.3 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 71/297 (23%), Positives = 117/297 (39%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
M GH + + +L++ P AS D +R+WD+ T H + V C+ W
Sbjct: 115 MPGHAEAVVSLNFSP-----DGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSW 169
Query: 348 GGSGL-IYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLALST---DYLMRVEATSTG 402
G + S + +I +W G R L GH +N LA D R A+++G
Sbjct: 170 APDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASG 229
Query: 403 GFK---YDPANPE---ESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR- 455
+D + + H A + + + S D T+ +W L R
Sbjct: 230 DGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADG--ILCRT 287
Query: 456 MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR 515
+GH +N + S D ++ + F + L+ Y +
Sbjct: 288 FSGHAHWVNNIALSTD-YVLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQAVCPDEVE 346
Query: 516 LLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
LVS S D+TL +W K + + GH + V V ++PD + +AS DK +RLW+
Sbjct: 347 SLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWR 403
Score = 164 (62.8 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 61/263 (23%), Positives = 107/263 (40%)
Query: 328 LSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTL 386
+++C + H +V + + G + S S D T+++W + T GH WV +
Sbjct: 108 VTRCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCV 167
Query: 387 ALSTDYLMRVEATSTGGFK-YDPANPEESSKHALA-KYQAQC---------PEGEKLVSG 435
+ + D G +DP ++ + K C PE KL S
Sbjct: 168 SWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASA 227
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI 495
S D +W+ K + L + GH + V + G +I ++S D+++K+W G
Sbjct: 228 SGDGDCRIWDV-KLGQCLMNIAGHTNAVTAVRWGGAG-LIYTSSKDRTVKMWRAADGILC 285
Query: 496 TTLRGHVQAVYMVAWSSDSRLLVSGS----ADSTLKVWNMKTKKIEQDLPGHGDEVYAVD 551
T GH V +A S+D +L +G D + ++ T+++++ V
Sbjct: 286 RTFSGHAHWVNNIALSTDY-VLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQAV---- 340
Query: 552 WAPDG-EKVASGGKDKVLRLWQN 573
PD E + S D L LW+N
Sbjct: 341 -CPDEVESLVSCSDDNTLYLWRN 362
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 1383 (491.9 bits), Expect = 2.1e-141, P = 2.1e-141
Identities = 264/470 (56%), Positives = 331/470 (70%)
Query: 114 ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE---GT-----PYLFYVNE-TEITK 164
ISV F + GSG V D++T C G+ P F+ E EI
Sbjct: 7 ISVSFVSEDENELGGSG-ILVPV-DISTNELQILCNQLLGSSDDPVPISFFTTEGAEIVD 64
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
++ L+ ++ E + +VYQ QAVF+VRPVTRC++S+PGH E VIS +FSP+GR LAS
Sbjct: 65 SIRK--SLEEIDFETTLKLVYQPQAVFRVRPVTRCSASIPGHGEPVISAQFSPDGRGLAS 122
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
GSGD T+R WD+ + PL C+ HK WVLCIAWSPD+ ++ S CKNG I W++ TG+QI
Sbjct: 123 GSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQI 182
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
G+ ++ HKQWIT+L+W+P H + CR AS GKDG I IWD + VR L+ HT SVTC
Sbjct: 183 GKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVVRCLSGHTASVTC 242
Query: 345 IRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF 404
+RWGG GLIYS SQDRT+K+WRA DGVMCR + GHAHW+NTLAL+TDY +R
Sbjct: 243 LRWGGEGLIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDYALRTSCFEPSKR 302
Query: 405 KYDPANPEESSKHALAKYQA--QCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL 462
P EE K A +Y+A + GE+LVSGSDDFTLF+WNP++ K+S+ RMTGH QL
Sbjct: 303 CIKPDTVEECQKVAQTRYEAALEIAGGERLVSGSDDFTLFMWNPKETKQSINRMTGHMQL 362
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
+N V FSPD R IASASFDKS+KLW GR GK++ +LRGHV VY VAWS+DSRLLVSGSA
Sbjct: 363 VNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRLLVSGSA 422
Query: 523 DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
DSTLKV+ +KTK + DLPGHGDEV+ VDW+P+G KV SGGKDKVL+LW+
Sbjct: 423 DSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLWR 472
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 146/495 (29%), Positives = 229/495 (46%)
Query: 12 RILTRFKSDD-GEVAGDLLDLPLNVNTEHLSLIVNSLL-QQDEGTPYLFYVNE-TEITKT 68
+I F S+D E+ G + +P++++T L ++ N LL D+ P F+ E EI +
Sbjct: 6 QISVSFVSEDENELGGSGILVPVDISTNELQILCNQLLGSSDDPVPISFFTTEGAEIVDS 65
Query: 69 LADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG 128
+ L+ ++ E + +VYQ QAVF+VRPVTRC++S+PGH E VIS +FSP+GR LASG
Sbjct: 66 IRK--SLEEIDFETTLKLVYQPQAVFRVRPVTRCSASIPGHGEPVISAQFSPDGRGLASG 123
Query: 129 SGDTTVRFWDVTTQTPLFKCEGTP--YLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ 186
SGD T+R WD+ + PL C+ L + TK + E+
Sbjct: 124 SGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATKIAS------ACKNGEI------ 171
Query: 187 KQAVFQVRPVTRCTSSMPGHAEAVISVKFSP-----NGRSLASGSGDTTVRFWDVTTQTP 241
++ + + ++ H + + S+ + P R LAS D + WD T Q
Sbjct: 172 --CIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWD-TVQGT 228
Query: 242 LFKC-EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSW 300
+ +C GH V C+ W + + SG ++ + W + G + M GH WI L+
Sbjct: 229 VVRCLSGHTASVTCLRWGGEGL-IYSGSQDRTVKMWRADDGVMC-RNMTGHAHWINTLAL 286
Query: 301 EP-FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQD 359
+ L C F S + I+ D + +C +V + TR + G + S S D
Sbjct: 287 NTDYALRTSC--FEPSKR--CIKP-DTV-EECQKV--AQTRYEAALEIAGGERLVSGSDD 338
Query: 360 RTIKVWRASDGVMC-RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE---SS 415
T+ +W + + GH VN + S D A+ K + S
Sbjct: 339 FTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASL 398
Query: 416 K-HALAKYQ-AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR-MTGHQQLINCVEFSPDG 472
+ H YQ A + LVSGS D TL ++ E + KSL + GH + V++SP+G
Sbjct: 399 RGHVGPVYQVAWSADSRLLVSGSADSTLKVF--ELKTKSLYYDLPGHGDEVFTVDWSPEG 456
Query: 473 RIIASASFDKSIKLW 487
+ S DK +KLW
Sbjct: 457 TKVVSGGKDKVLKLW 471
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 1364 (485.2 bits), Expect = 2.1e-139, P = 2.1e-139
Identities = 244/425 (57%), Positives = 321/425 (75%)
Query: 149 EGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAE 208
E PY FYV++ E+ + L + ++ E+V+ IVYQ+QAVF++RPV RC+ ++ GHAE
Sbjct: 51 EMLPYSFYVSDEELLVPVGTYLEKNKVSVEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAE 110
Query: 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC 268
AV+ V FSP+G+ LASGSGDTTVR WD+ T+TPLF C+GHK+WVL +AWSPD K LVSG
Sbjct: 111 AVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGS 170
Query: 269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
K+G I W+ G+ G P+ GHK+WIT +SWEP HL+ CRRF +S KDG RIWD+ L
Sbjct: 171 KSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITL 230
Query: 329 SQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
+ + L+ HT +VTC++WGG G+IY+ SQD TIK+W + G + R L+GH HW+N+LAL
Sbjct: 231 KKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLAL 290
Query: 389 STDYLMRVEATSTGGFKYDPANPEESSKHALAKY-QAQCPEGEKLVSGSDDFTLFLWNPE 447
ST+Y++R A G +Y P N EE K AL +Y + + E+LVSGSDDFT+FLW P
Sbjct: 291 STEYVLRTGAFDHTGRQYPP-N-EEKQK-ALERYNKTKGDSPERLVSGSDDFTMFLWEPS 347
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
K+ R+TGHQQL+N V FSPDG+ IASASFDKS++LW+G G+F+T RGHV VY
Sbjct: 348 VSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQ 407
Query: 508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV 567
V+WS+DSRLL+SGS DSTLK+W ++TKK++QDLPGH DEV+AVDW+PDGEKV SGGKD+V
Sbjct: 408 VSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRV 467
Query: 568 LRLWQ 572
L+LW+
Sbjct: 468 LKLWK 472
Score = 336 (123.3 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
Identities = 67/150 (44%), Positives = 97/150 (64%)
Query: 1 MEVDDDKITTKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYV 60
M+ D+ K T +LT +G G + +P L+ +VN L +E PY FYV
Sbjct: 4 MDTDEGK-TVMCLLT---DPEGTHLGSAMYIPQKAGPLQLTQLVNRFLDNEEMLPYSFYV 59
Query: 61 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 120
++ E+ + L + ++ E+V+ IVYQ+QAVF++RPV RC+ ++ GHAEAV+ V FSP
Sbjct: 60 SDEELLVPVGTYLEKNKVSVEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSP 119
Query: 121 NGRSLASGSGDTTVRFWDVTTQTPLFKCEG 150
+G+ LASGSGDTTVR WD+ T+TPLF C+G
Sbjct: 120 DGKQLASGSGDTTVRLWDLYTETPLFTCKG 149
Score = 129 (50.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 37/131 (28%), Positives = 66/131 (50%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD-VTTQ-TPLFKCEGTPYLFYVNETEIT 163
+ GH + V V FSP+G+ +AS S D +VR W+ +T Q +F+ P ++ V+ + +
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGP-VYQVSWSADS 414
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
+ L TL ++++R + +PGHA+ V +V +SP+G +
Sbjct: 415 RLLLSGSKDSTLK-------------IWEIR-TKKLKQDLPGHADEVFAVDWSPDGEKVV 460
Query: 224 SGSGDTTVRFW 234
SG D ++ W
Sbjct: 461 SGGKDRVLKLW 471
Score = 123 (48.4 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 41/154 (26%), Positives = 73/154 (47%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH V++V +SP+G+ L SGS + W+ + EG+P + + IT
Sbjct: 149 GHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKG----ELEGSPLTGH--KKWITGISW 202
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
+ + L + V ++ + + + + GH AV VK+ +G + +GS
Sbjct: 203 EPVHLSSPCRRFVTSSKDGDARIWDIT-LKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQ 260
Query: 228 DTTVRFWDVTTQTPLFK-CEGHKHWVLCIAWSPD 260
D T++ W+ TTQ L + +GH HW+ +A S +
Sbjct: 261 DCTIKMWE-TTQGKLIRELKGHGHWINSLALSTE 293
Score = 118 (46.6 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
Identities = 40/143 (27%), Positives = 62/143 (43%)
Query: 353 IYSASQDRTIKVWRASDGVMCRT-LEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPAN 410
+ S S D T+ +W S + L GH VN + S D A+ + ++
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 411 PEESSK---HALAKYQAQ-CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV 466
+ + H YQ + L+SGS D TL +W + KK + GH + V
Sbjct: 392 GQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEI-RTKKLKQDLPGHADEVFAV 450
Query: 467 EFSPDGRIIASASFDKSIKLWDG 489
++SPDG + S D+ +KLW G
Sbjct: 451 DWSPDGEKVVSGGKDRVLKLWKG 473
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 1319 (469.4 bits), Expect = 1.2e-134, P = 1.2e-134
Identities = 245/426 (57%), Positives = 310/426 (72%)
Query: 149 EGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAE 208
E PY F+VN+ EIT L + L+ L+ E + I YQ QAVF+VRPVTRC SSM GH E
Sbjct: 84 EQLPYSFFVNDQEITNNLKN--HLEGLSDETTLSIYYQPQAVFRVRPVTRCASSMSGHTE 141
Query: 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC 268
AV++ FSP+G+ S GDTTVR WD+ T TP +GH +WVL +AWSPDSK++ +
Sbjct: 142 AVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAG 201
Query: 269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
G I W TGKQ+G ++GH ++IT LSWEPFHLN +C R ASS KD IRIWD
Sbjct: 202 MEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTES 261
Query: 329 SQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
+ + L+ HT SVTC++WGG GLIYS SQDRT++V+ +DG + R L+GHAHWVNTLAL
Sbjct: 262 CKNLMSLSGHTMSVTCLKWGGEGLIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLAL 321
Query: 389 STDYLMRVEATSTGGFKYDPANPEESSKHALAKY---QAQCPEGEKLVSGSDDFTLFLWN 445
+TDY++R + G +YD EE+ + AL +Y +A+ E L+SGSDDFT+ +WN
Sbjct: 322 NTDYVLRTGSYDHTGKEYDTL--EEAQRVALERYNDVKAKSKGMEILISGSDDFTVIMWN 379
Query: 446 PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
P K S++R+TGHQQLIN V FSPDGR ASASFDKSIKLWDG+ GKF+ RGHV AV
Sbjct: 380 PSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAV 439
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
Y V WSSDSR LVSGS DSTLK+W++KTKK+E++LPGH DEVY VDW+PDG++VASG KD
Sbjct: 440 YQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKD 499
Query: 566 KVLRLW 571
++LR+W
Sbjct: 500 RLLRIW 505
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 152/489 (31%), Positives = 238/489 (48%)
Query: 13 ILTRFKSDDGE--VAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTLA 70
++ +FK+ D E G +++ NV TE L +++NSLL DE PY F+VN+ EIT L
Sbjct: 43 LIVQFKNKDSENDTTGPPINISQNVTTEQLQMLINSLLNNDEQLPYSFFVNDQEITNNLK 102
Query: 71 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 130
+ L+ L+ E + I YQ QAVF+VRPVTRC SSM GH EAV++ FSP+G+ S G
Sbjct: 103 N--HLEGLSDETTLSIYYQPQAVFRVRPVTRCASSMSGHTEAVLNCAFSPDGKGFVSVGG 160
Query: 131 DTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQA 189
DTTVR WD+ T TP +G T ++ V + +K +A T E + I + Q
Sbjct: 161 DTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKIA------TAGMEGDIRI-WCPQT 213
Query: 190 VFQVRPVTRCTSSMPGHAEAVISVKFSP---NGRS--LASGSGDTTVRFWDVTTQTPLFK 244
Q+ S++ GH + + + + P N + LAS S D+T+R WD + L
Sbjct: 214 GKQLG------STLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMS 267
Query: 245 CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304
GH V C+ W + + SG ++ + ++++ G+ + + + GH W+ L+ +
Sbjct: 268 LSGHTMSVTCLKWGGEGL-IYSGSQDRTVRVFNTTDGRLV-RVLDGHAHWVNTLALNTDY 325
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
+ + + +GK+ +D L + RV V G LI + I
Sbjct: 326 VL-RTGSYDHTGKE-----YDT-LEEAQRVALERYNDVKAKSKGMEILISGSDDFTVIMW 378
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSK---HALA 420
+ L GH +N ++ S D A+ K +D + + H A
Sbjct: 379 NPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGA 438
Query: 421 KYQAQC--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
YQ C + LVSGS D TL +W+ K KK + GH + V++SPDG +AS
Sbjct: 439 VYQV-CWSSDSRYLVSGSKDSTLKIWDI-KTKKMEKELPGHADEVYTVDWSPDGDRVASG 496
Query: 479 SFDKSIKLW 487
S D+ +++W
Sbjct: 497 SKDRLLRIW 505
Score = 292 (107.8 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 91/346 (26%), Positives = 152/346 (43%)
Query: 200 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-EGHKHWVLCIAWS 258
T ++ GH V+ V +SP+ + +A+ + +R W T L +GH ++ ++W
Sbjct: 175 THTLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWE 234
Query: 259 P---DSK--QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFA 313
P + K +L S K+ I WD+ + K + + GH +T L W L +
Sbjct: 235 PFHLNPKCVRLASSSKDSTIRIWDTESCKNL-MSLSGHTMSVTCLKWGGEGLIY------ 287
Query: 314 SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMC 373
S +D +R+++ + VRVL H V + ++ + S D T K + +
Sbjct: 288 SGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQR 347
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE--ESSKHALAKYQ------AQ 425
LE + + A S M + + + F NP ++S L +Q +
Sbjct: 348 VALE---RYNDVKAKSKG--MEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSF 402
Query: 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIK 485
P+G S S D ++ LW+ + K L GH + V +S D R + S S D ++K
Sbjct: 403 SPDGRYFASASFDKSIKLWDGQSGK-FLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLK 461
Query: 486 LWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
+WD + K L GH VY V WS D + SGS D L++W +
Sbjct: 462 IWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIWTV 507
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 1177 (419.4 bits), Expect = 1.4e-119, P = 1.4e-119
Identities = 219/424 (51%), Positives = 290/424 (68%)
Query: 157 VNETEITKTLADVLPLDTLN-TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKF 215
V +IT L L N TE+ + ++Y +AVF+V+PVTR +S++ GH ++ F
Sbjct: 92 VKTIDITDNLYSSLIKPGYNSTEDQITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAF 151
Query: 216 SPNGRS-LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH 274
+P+ S + +G+GD T R WD TQTP+ +GH +WVLC++WSPD + + +G + I
Sbjct: 152 APHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIR 211
Query: 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCR--RFASSGKDGAIRIWDVILSQCV 332
WD +G+ +G +RGH +WIT+LSWEP HL R ASS KDG I+IWD + C
Sbjct: 212 LWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQ 271
Query: 333 RVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRA-SDGVMCRTLEGHAHWVNTLALSTD 391
++ HT SV+C++WGG GL+YS S DRT++VW S G L+ HAHWVN L+LSTD
Sbjct: 272 YTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTD 331
Query: 392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG----EKLVSGSDDFTLFLWNPE 447
Y +R+ A G K P+ PEE+ K AL Y+ C + E +V+ SDD+T+FLWNP
Sbjct: 332 YALRIGAFDHTGKK--PSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPL 389
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
K K +ARMTGHQ+L+N V FSPDGR I SASFD SIKLWDGR GKFI+T RGHV +VY
Sbjct: 390 KSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQ 449
Query: 508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV 567
VAWSSD RLLVS S D+TLKVW+++T+K+ DLPGH DEVY VDW+ DG++V SGGKDK+
Sbjct: 450 VAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKM 509
Query: 568 LRLW 571
+RLW
Sbjct: 510 VRLW 513
Score = 364 (133.2 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 135/497 (27%), Positives = 230/497 (46%)
Query: 16 RFKS-DDGEVAGDLLDLPLNVNTEHLSLIVNSLL-QQDEGTPYLFY-----------VNE 62
+F++ D G+ G L +P ++ + L ++N L D+ PY F V
Sbjct: 35 KFQALDTGDNVGGALRVPGAISEKQLEELLNQLNGTSDDPVPYTFSCTIQGKKASDPVKT 94
Query: 63 TEITKTLADVLPLDTLN-TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN 121
+IT L L N TE+ + ++Y +AVF+V+PVTR +S++ GH ++ F+P+
Sbjct: 95 IDITDNLYSSLIKPGYNSTEDQITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAFAPH 154
Query: 122 GRS-LASGSGDTTVRFWDVTTQTPLFKCEGT-PYLFYVNETEITKTLADVLPLDTLNTEE 179
S + +G+GD T R WD TQTP+ +G ++ V+ + + +A +D NT
Sbjct: 155 TSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATG-SMD--NTIR 211
Query: 180 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ 239
+ D + +R ++ +S+ E + VK R LAS S D T++ WD ++
Sbjct: 212 LWDPKSGQCLGDALRGHSKWITSLSW--EPIHLVKPGSKPR-LASSSKDGTIKIWDTVSR 268
Query: 240 TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD-SSTGKQIGQPMRGHKQWITAL 298
+ GH + V C+ W L SG + + WD +S G+ I ++ H W+ L
Sbjct: 269 VCQYTMSGHTNSVSCVKWGGQGL-LYSGSHDRTVRVWDINSQGRCINI-LKSHAHWVNHL 326
Query: 299 SWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSAS 357
S + + F +GK + + + + + C + G S ++ +AS
Sbjct: 327 SLSTDYAL-RIGAFDHTGKKPSTP------EEAQKKALENYEKI-CKKNGNSEEMMVTAS 378
Query: 358 QDRTIKVWRA--SDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEES 414
D T+ +W S + R + GH VN +A S D V A+ K +D + +
Sbjct: 379 DDYTMFLWNPLKSTKPIAR-MTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFI 437
Query: 415 SK---HALAKYQ-AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP 470
S H + YQ A + LVS S D TL +W+ K S+ + GH+ + V++S
Sbjct: 438 STFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVD-LPGHKDEVYTVDWSV 496
Query: 471 DGRIIASASFDKSIKLW 487
DG+ + S DK ++LW
Sbjct: 497 DGKRVCSGGKDKMVRLW 513
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 202/401 (50%), Positives = 277/401 (69%)
Query: 177 TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWD 235
TE+ + + + QA+F+V+ V+RC++S+ GH EA+++ FSP + ++ SGSGD+T R WD
Sbjct: 118 TEDTIQLYFTPQAIFRVKAVSRCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWD 177
Query: 236 VTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWI 295
T TPL +GH WVL +++SP+ + +G + + WD+ G+ +G P++GH +WI
Sbjct: 178 CDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWI 237
Query: 296 TALSWEPFHLNHQCR-RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY 354
T+L+WEP+HL R AS+ KD +RIWDVI + VL+ H SVTC+RWGG+G IY
Sbjct: 238 TSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIY 297
Query: 355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATS-TGGFKYDPANPEE 413
++S DRTIKVW + G + +TL HAH VN LALSTD+++R TG A+
Sbjct: 298 TSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVA 357
Query: 414 SSKHALAKYQAQCPE-GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG 472
+K K + EKLVS SDDFT++LW+PE K +AR+ GHQ+ +N V FSPD
Sbjct: 358 MAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDM 417
Query: 473 RIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
IASA FD +KLW+GR GKFITTLRGHV AVY +S+DSRLLVS S D+TLKVWN++
Sbjct: 418 AYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVR 477
Query: 533 TKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
T K+ +DLPGH DEV+AVDW+PDG+KV SGGKDK +R+W+N
Sbjct: 478 TGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIWRN 518
Score = 390 (142.3 bits), Expect = 4.6e-36, P = 4.6e-36
Identities = 145/503 (28%), Positives = 229/503 (45%)
Query: 17 FKSDDGEVAGDLLDLPL-NVNTEHLSLIVNSLL--QQDEGTPYLF-YVNETEITKT---- 68
F G G + +P+ + ++L ++N+L ++DE PY F + ++ + +K
Sbjct: 41 FDQATGSATGPAVSVPVADATVKNLETLLNTLQGNEEDERVPYRFTFQSDDKDSKDSQTI 100
Query: 69 --LADV----LPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP-N 121
LAD+ L TE+ + + + QA+F+V+ V+RC++S+ GH EA+++ FSP +
Sbjct: 101 DILADIYHSLLKPGVKTTEDTIQLYFTPQAIFRVKAVSRCSASIAGHGEAILATSFSPVS 160
Query: 122 GRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTLADVLPLDTLNTEEV 180
++ SGSGD+T R WD T TPL +G T ++ V+ + +A +D NT +
Sbjct: 161 SSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATG-SMD--NTVRI 217
Query: 181 VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP-----NGRS-LASGSGDTTVRFW 234
D + QA+ + + GH + + S+ + P +G LAS S D+TVR W
Sbjct: 218 WD-AKKGQAL---------GAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIW 267
Query: 235 DVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQW 294
DV ++ GHK V C+ W K + + + I W+S TG I Q + H
Sbjct: 268 DVISKRADIVLSGHKGSVTCVRWGGTGK-IYTSSHDRTIKVWNSQTGTLI-QTLSAHAHR 325
Query: 295 IT--ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL 352
+ ALS + F L R A G + D + V + I
Sbjct: 326 VNHLALSTD-FIL-----RTAYHDHTGKVPESD---ADKVAMAKKRFEKAATINNKIVEK 376
Query: 353 IYSASQDRTIKVW--RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKY---- 406
+ SAS D T+ +W +S + R L GH VN + S D A K
Sbjct: 377 LVSASDDFTMYLWDPESSSKPVARLL-GHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGR 435
Query: 407 DPANPEESSKHALAKYQAQC--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN 464
D H A YQ C + LVS S D TL +WN K S + GH+ +
Sbjct: 436 DGKFITTLRGHVGAVYQC-CFSADSRLLVSSSKDTTLKVWNVRTGKLS-EDLPGHKDEVF 493
Query: 465 CVEFSPDGRIIASASFDKSIKLW 487
V++SPDG+ + S DK+I++W
Sbjct: 494 AVDWSPDGQKVGSGGKDKAIRIW 516
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
Identities = 218/475 (45%), Positives = 305/475 (64%)
Query: 113 VISVKF--SPNGRSLAS--GSGDTTVRFWDVTTQTPLFKCEG-TPYLF---YVNET-EIT 163
+++V+F S + LAS G+++VR + L + PY F + +ET EI
Sbjct: 30 LVNVQFRASDDSNELASLLVPGNSSVRQLEALLNQLLENSDDPVPYNFALHHEDETIEIQ 89
Query: 164 KTL-ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS- 221
L V + TE+ + ++Y QAVF+VR VTRCT+SM GH +IS +FSP+ S
Sbjct: 90 DNLYTSVFHNGLMKTEDHLTLLYTPQAVFRVRAVTRCTASMNGHDGTIISAQFSPSTSSR 149
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
L +GSGD T R WD TQTP+ +GH +WV C+AW+PD+ + +G + I WD G
Sbjct: 150 LVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKG 209
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRF--ASSGKDGAIRIWDVILSQCVRVLTSHT 339
IG +R H + I AL W+P HL + AS KD +RIW+V L + L+ HT
Sbjct: 210 SPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHT 269
Query: 340 RSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT 399
+TC+RWGG IYS+S D+TI++W A DG L+GHA VN L+LST++++R A
Sbjct: 270 APITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAY 329
Query: 400 STGGFKYDPANPEESSKHALAKYQAQCPE-GEKLVSGSDDFTLFLWNPEKEKKSLARMTG 458
FK P + + + A +Y+A + GE+LVS SDD L LW+P+K K + +M G
Sbjct: 330 DHTDFK--PKSFSDERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHG 387
Query: 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV 518
HQ+++N FSPDGR IA+ASFD S++LWDG+ GKF+ TLRGHV AVY AWS+DSRLLV
Sbjct: 388 HQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLV 447
Query: 519 SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
S S D+TLKVW++++KK++ DLPGH D+V+AVDW+PDG++VASGG DK +R+W +
Sbjct: 448 SSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWSH 502
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 146/489 (29%), Positives = 225/489 (46%)
Query: 19 SDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQ-DEGTPYLF---YVNET-EITKTL-ADV 72
SDD LL +P N + L ++N LL+ D+ PY F + +ET EI L V
Sbjct: 38 SDDSNELASLL-VPGNSSVRQLEALLNQLLENSDDPVPYNFALHHEDETIEIQDNLYTSV 96
Query: 73 LPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS-LASGSGD 131
+ TE+ + ++Y QAVF+VR VTRCT+SM GH +IS +FSP+ S L +GSGD
Sbjct: 97 FHNGLMKTEDHLTLLYTPQAVFRVRAVTRCTASMNGHDGTIISAQFSPSTSSRLVTGSGD 156
Query: 132 TTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVF 191
T R WD TQTP+ +G + N D + T + + + K+
Sbjct: 157 FTARLWDCDTQTPIATMKG-----HTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKG-- 209
Query: 192 QVRPVTRCTSSMPGHAEAVISVKFSP------NGRSL-ASGSGDTTVRFWDVTTQTPLFK 244
P+ ++ H + ++++ + P +G L ASGS D TVR W+V +T LF
Sbjct: 210 --SPIG---DALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFT 264
Query: 245 CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304
GH + C+ W + + S + I WD+ GK + ++GH + LS
Sbjct: 265 LSGHTAPITCVRWGGQN-WIYSSSYDKTIRIWDAKDGKCL-HILKGHAARVNHLS---LS 319
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
H R A D + + S R + R C++ G L+ SAS D + +
Sbjct: 320 TEHVLRSGAYDHTDFKPKSF----SDERR--KAKERYEACLKQSGERLV-SASDDLQLIL 372
Query: 365 WRASDGVMCRT-LEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSK---HAL 419
W T + GH VN + S D A+ + +D + + H
Sbjct: 373 WDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVA 432
Query: 420 AKYQ-AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
A YQ A + LVS S D TL +W+ + KK + GH+ + V++SPDG+ +AS
Sbjct: 433 AVYQCAWSTDSRLLVSSSQDTTLKVWDV-RSKKMKFDLPGHEDQVFAVDWSPDGQRVASG 491
Query: 479 SFDKSIKLW 487
DK++++W
Sbjct: 492 GADKAVRIW 500
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
Identities = 194/409 (47%), Positives = 266/409 (65%)
Query: 178 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDV 236
E + + + QAVF+V+ V+R +PGH E ++ +FSP + LA+GSGD T R WD
Sbjct: 123 ETTLTLAAEPQAVFKVQAVSRLAHRIPGHGEPILCAQFSPASSARLATGSGDNTARIWDA 182
Query: 237 TTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWIT 296
T TP +GH WVL ++WSPD +L + + + WD TGKQ+G ++GH +W+
Sbjct: 183 ETGTPKHTLKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQ 242
Query: 297 ALSWEPFHL-NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG---GSGL 352
++WEP HL R S+ KD RIW V + VL+ H SV+C+RWG G+G+
Sbjct: 243 GIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGV 302
Query: 353 IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD---PA 409
+Y+AS D+T+KVW A G + L+ HAHWVN LALSTD++ R TG F + PA
Sbjct: 303 VYTASHDKTVKVWDAVKGTLLHDLKSHAHWVNHLALSTDFVCR-----TGFFDHTKTVPA 357
Query: 410 NPEESSKHALAKYQAQCPEG----EKLVSGSDDFTLFLWNPEKE-KKSLARMTGHQQLIN 464
EE + A +Y+ G E+LVS SDDFT++L++P + K +ARM GHQ+ +N
Sbjct: 358 TAEEKTAKAKERYEKAARVGGKIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVN 417
Query: 465 CVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524
V FSPDG +IASA +D + KLW+ R GKFI TLRGHV VY ++S+DSRLLV+ S D+
Sbjct: 418 HVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDT 477
Query: 525 TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
TLKVWN++T K+ DLPGH DEVY VDW+PDG++V SGG+DK +RLW+N
Sbjct: 478 TLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLWRN 526
Score = 313 (115.2 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 132/490 (26%), Positives = 210/490 (42%)
Query: 34 NVNTEHLSLIVNSLLQQD--EGTPYLFYV-------NETEIT-----KTLADVLPLDTLN 79
+ + +++SL++N+LL +D E PY F + N+ EI L +L +
Sbjct: 60 DASEKNVSLLLNTLLGRDADESVPYRFRILLPPGKGNKEEIVIDSYPSDLGALLRQHGIE 119
Query: 80 T--EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRF 136
E + + + QAVF+V+ V+R +PGH E ++ +FSP + LA+GSGD T R
Sbjct: 120 DAFETTLTLAAEPQAVFKVQAVSRLAHRIPGHGEPILCAQFSPASSARLATGSGDNTARI 179
Query: 137 WDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPV 196
WD T TP +G + +V + D L T + ++ V I + + QV
Sbjct: 180 WDAETGTPKHTLKG--HAGWVLGVSWSP---DGTRLATCSMDKTVRI-WDPETGKQVG-- 231
Query: 197 TRCTSSMPGHAEAVISVKFSP-----NGRS-LASGSGDTTVRFWDVTTQTPLFKCEGHKH 250
S + GHA+ V + + P +G L S S D T R W V T GHK
Sbjct: 232 ----SELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKG 287
Query: 251 WVLCIAWSPDSKQLV--SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQ 308
V C+ W + V + + + WD+ G + ++ H W+ L+ +
Sbjct: 288 SVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLL-HDLKSHAHWVNHLA---LSTDFV 343
Query: 309 CRR-FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL--IYSASQDRTIKVW 365
CR F K V + + + R R GG + + SAS D T+ ++
Sbjct: 344 CRTGFFDHTKT-------VPATAEEKTAKAKERYEKAARVGGKIVERLVSASDDFTMYLF 396
Query: 366 RA-SDGV--MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK----HA 418
+DG + R + GH VN + S D M A K A + H
Sbjct: 397 DPLNDGTKPIARMI-GHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHV 455
Query: 419 LAKYQAQ-CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS 477
YQ + LV+ S D TL +WN K + + GH+ + V++SPDG+ + S
Sbjct: 456 APVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLA-TDLPGHEDEVYGVDWSPDGQRVGS 514
Query: 478 ASFDKSIKLW 487
DK+++LW
Sbjct: 515 GGRDKAVRLW 524
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 606 (218.4 bits), Expect = 3.6e-60, Sum P(2) = 3.6e-60
Identities = 151/482 (31%), Positives = 245/482 (50%)
Query: 98 PVT-RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPY-LF 155
P T ++ GH+ V S+ FSP+G+ LASGS D T+ WD T L EG P+ ++
Sbjct: 779 PATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIW 838
Query: 156 YVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKF 215
V K LA T+ ++ D+ A +++ ++ H+++V SV F
Sbjct: 839 SVAFAPDGKELASASDDSTI---KIWDL-----ATGELQ------QTLDSHSQSVRSVAF 884
Query: 216 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA 275
SP+G+ LAS S D+T++ W+ T EG WV +A+SPD K+L SG + +
Sbjct: 885 SPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKL 944
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
W+ +TG+ + Q + GH Q + ++++ P ++ ASS D I++W+ + +
Sbjct: 945 WNPATGELL-QTLEGHSQSVRSVAFSP-----DGKQLASSSSDTTIKLWNSTTGELQQTF 998
Query: 336 TSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLM 394
H + + + G + S S D TIK+W + + ++LE H+ V+ +A S D
Sbjct: 999 KGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQ 1058
Query: 395 RVEATSTGGFK-YDPANPEESSK---HALAKYQAQ-CPEGEKLVSGSDDFTLFLWNPEKE 449
++ K +D A E H+ P+G+ L S S D T+ LWNP
Sbjct: 1059 LASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTG 1118
Query: 450 KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVA 509
+ +TG ++ V FSPDG+ +AS +D +IKLWD G+ + TL GH + V
Sbjct: 1119 ELQQT-LTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVV 1177
Query: 510 WSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLR 569
+S D +LL SGS D T K+W+ T ++ Q GH V +V ++PDG+ +AS + ++
Sbjct: 1178 FSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIK 1237
Query: 570 LW 571
LW
Sbjct: 1238 LW 1239
Score = 599 (215.9 bits), Expect = 2.1e-59, Sum P(2) = 2.1e-59
Identities = 151/461 (32%), Positives = 239/461 (51%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH ++ SV F+P+G+ LAS S D+T++ WD+ T G + ++ +++A
Sbjct: 832 GHPHSIWSVAFAPDGKELASASDDSTIKIWDLAT--------GELQQTLDSHSQSVRSVA 883
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFSPNGRSLASGS 226
P L +D + V+ P T S+ G + V SV FSP+G+ LASGS
Sbjct: 884 -FSPDGKLLASSSLDSTIK---VWN--PATGELQQSLEGRSGWVKSVAFSPDGKKLASGS 937
Query: 227 GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ 286
TV+ W+ T L EGH V +A+SPD KQL S + I W+S+TG ++ Q
Sbjct: 938 EKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTG-ELQQ 996
Query: 287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+GH WI A+++ P + S D I++WD+ S+ + L H+RSV +
Sbjct: 997 TFKGHDLWIRAVAFSP-----DGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVA 1051
Query: 347 WGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK 405
+ + S+S D TIK+W ++ G + RTLEGH+ V ++ S D + + G K
Sbjct: 1052 FSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIK 1111
Query: 406 -YDPANPEE----SSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ 460
++P E + + A P+G++L SG D T+ LW+ + L + GH
Sbjct: 1112 LWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWD-SATGELLQTLEGHS 1170
Query: 461 QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSG 520
I V FSPDG+++AS S+D++ KLWD G+ + GH + V VA+S D +LL S
Sbjct: 1171 DRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASS 1230
Query: 521 SADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS 561
S T+K+W+ T ++ Q L + +V ++PDG ++AS
Sbjct: 1231 SYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLAS 1271
Score = 582 (209.9 bits), Expect = 1.4e-57, Sum P(2) = 1.4e-57
Identities = 134/376 (35%), Positives = 207/376 (55%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ H V SV FSP+G+ L SGS D TV+ WD T L +GH V +A+SPD
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG 804
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L SG + I WDS+TG+ + Q GH I ++++ P + AS+ D I
Sbjct: 805 KLLASGSYDNTIDLWDSATGELL-QTFEGHPHSIWSVAFAP-----DGKELASASDDSTI 858
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
+IWD+ + + L SH++SV + + G L+ S+S D TIKVW + G + ++LEG +
Sbjct: 859 KIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRS 918
Query: 381 HWVNTLALSTDYLMRVEATSTGGFK-YDPANPE--ESSK-HALA-KYQAQCPEGEKLVSG 435
WV ++A S D + K ++PA E ++ + H+ + + A P+G++L S
Sbjct: 919 GWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASS 978
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI 495
S D T+ LWN + GH I V FSPDG+ + S S D +IKLWD +
Sbjct: 979 SSDTTIKLWNSTTGELQQT-FKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQ 1037
Query: 496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPD 555
+L H ++V+ VA+S D + L S S DST+K+W+ T ++++ L GH V +V ++PD
Sbjct: 1038 QSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPD 1097
Query: 556 GEKVASGGKDKVLRLW 571
G+ +AS D ++LW
Sbjct: 1098 GKLLASNSYDGTIKLW 1113
Score = 581 (209.6 bits), Expect = 1.8e-57, Sum P(2) = 1.8e-57
Identities = 133/386 (34%), Positives = 212/386 (54%)
Query: 195 PVT-RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVL 253
P T ++ GH+ V S+ FSP+G+ LASGS D T+ WD T L EGH H +
Sbjct: 779 PATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIW 838
Query: 254 CIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFA 313
+A++PD K+L S + I WD +TG ++ Q + H Q + ++++ P + A
Sbjct: 839 SVAFAPDGKELASASDDSTIKIWDLATG-ELQQTLDSHSQSVRSVAFSP-----DGKLLA 892
Query: 314 SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVM 372
SS D I++W+ + + L + V + + G + S S+ T+K+W + G +
Sbjct: 893 SSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGEL 952
Query: 373 CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE--ESSK-HAL-AKYQAQCP 427
+TLEGH+ V ++A S D ++S K ++ E ++ K H L + A P
Sbjct: 953 LQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSP 1012
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
+G+ LVSGSDD T+ LW+ + + + H + ++ V FSPD + +AS+S D +IKLW
Sbjct: 1013 DGKHLVSGSDDNTIKLWDLATSELQQS-LEDHSRSVHAVAFSPDDKQLASSSLDSTIKLW 1071
Query: 488 DGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
D G+ TL GH Q V V +S D +LL S S D T+K+WN T +++Q L G D V
Sbjct: 1072 DSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWV 1131
Query: 548 YAVDWAPDGEKVASGGKDKVLRLWQN 573
+V ++PDG+++ASG D ++LW +
Sbjct: 1132 DSVAFSPDGKQLASGYYDSTIKLWDS 1157
Score = 513 (185.6 bits), Expect = 3.4e-50, Sum P(2) = 3.4e-50
Identities = 117/346 (33%), Positives = 187/346 (54%)
Query: 234 WDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQ 293
W QT E H V + +SPD KQLVSG + + WD +TG+ + Q + GH
Sbjct: 739 WSAEQQT----LENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELL-QTLDGHSG 793
Query: 294 WITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL- 352
+ +L++ P + AS D I +WD + ++ H S+ + + G
Sbjct: 794 TVESLAFSP-----DGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKE 848
Query: 353 IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANP 411
+ SAS D TIK+W + G + +TL+ H+ V ++A S D + ++ K ++PA
Sbjct: 849 LASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATG 908
Query: 412 E-ESS---KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE 467
E + S + K A P+G+KL SGS+ T+ LWNP + L + GH Q + V
Sbjct: 909 ELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGEL-LQTLEGHSQSVRSVA 967
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527
FSPDG+ +AS+S D +IKLW+ G+ T +GH + VA+S D + LVSGS D+T+K
Sbjct: 968 FSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIK 1027
Query: 528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
+W++ T +++Q L H V+AV ++PD +++AS D ++LW +
Sbjct: 1028 LWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDS 1073
Score = 507 (183.5 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
Identities = 123/371 (33%), Positives = 195/371 (52%)
Query: 186 QKQAVFQVRPVT-RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK 244
+K V P T ++ GH+++V SV FSP+G+ LAS S DTT++ W+ TT
Sbjct: 938 EKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQT 997
Query: 245 CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304
+GH W+ +A+SPD K LVSG + I WD +T ++ Q + H + + A+++ P
Sbjct: 998 FKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATS-ELQQSLEDHSRSVHAVAFSP-- 1054
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIK 363
++ ASS D I++WD + R L H++ V + + G L+ S S D TIK
Sbjct: 1055 ---DDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIK 1111
Query: 364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE--ESSKHALA 420
+W G + +TL G + WV+++A S D K +D A E ++ +
Sbjct: 1112 LWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSD 1171
Query: 421 KYQAQC--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
+ Q+ P+G+ L SGS D T LW+P + L GH + + V FSPDG+++AS+
Sbjct: 1172 RIQSVVFSPDGKLLASGSYDQTAKLWDPATGEL-LQIFEGHSKWVESVAFSPDGKLLASS 1230
Query: 479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ 538
S+ ++IKLWD G+ + TL ++ VA+S D L S T K+W+ T ++ Q
Sbjct: 1231 SYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDT-KIWDPATGELLQ 1289
Query: 539 DLPGHGDEVYA 549
L GH V++
Sbjct: 1290 ALKGHSKWVWS 1300
Score = 229 (85.7 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 58/198 (29%), Positives = 96/198 (48%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ H V SV FSP+G+ L SGS D TV+ WD T L +G + E
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDG-----HSGTVESLA 799
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
D L + + + +D+ A ++ + GH ++ SV F+P+G+ LAS
Sbjct: 800 FSPDGKLLASGSYDNTIDL--WDSATGEL------LQTFEGHPHSIWSVAFAPDGKELAS 851
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
S D+T++ WD+ T + H V +A+SPD K L S + I W+ +TG ++
Sbjct: 852 ASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATG-EL 910
Query: 285 GQPMRGHKQWITALSWEP 302
Q + G W+ ++++ P
Sbjct: 911 QQSLEGRSGWVKSVAFSP 928
Score = 51 (23.0 bits), Expect = 3.6e-60, Sum P(2) = 3.6e-60
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 17 FKSDDGEVAG-DLLDLPLNVNTEHLSLIVNSLLQQDEGTPYL--FYVNETEITKTLADVL 73
FK+ + + DL +P + T +S+ + L Q GT L + E I LA L
Sbjct: 356 FKAVENSLQNMDLHSIPSSETTRDVSIFLEHSLTQIRGTHGLPADWPGEEAINDLLARTL 415
Query: 74 PL 75
PL
Sbjct: 416 PL 417
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 99/298 (33%), Positives = 155/298 (52%)
Query: 277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT 336
+ + G ++ Q + GH WI +++ P R AS D I++WD + L
Sbjct: 27 EDNWGPEL-QTLEGHSDWIETVTFSP-----DGRLLASGSNDTTIKLWDPASGGLKQTLE 80
Query: 337 SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMR 395
H+ SV + + +G L+ S S D TIK+W ++ + T+EGH+ V ++A S + +
Sbjct: 81 GHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLW 140
Query: 396 VEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEK--EKKSL 453
A G K+ E S L+ A P+G+ L SGS + T+ LW+ K +L
Sbjct: 141 NPAI--GSLKH---TIEGHSDWVLSV--AFSPDGQLLASGSAEKTIKLWDSATCGLKHTL 193
Query: 454 ARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD 513
GH + + FSPDGR++AS S D +IKLWD G TL GH + +A+S +
Sbjct: 194 G---GHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPN 250
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+LL SGS+D+T+K+W+ T L GH D V +V ++PD + + SG D ++LW
Sbjct: 251 GQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLW 308
Score = 385 (140.6 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 97/307 (31%), Positives = 153/307 (49%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL 305
EGH W+ + +SPD + L SG + I WD ++G + Q + GH + ++++ P
Sbjct: 38 EGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGG-LKQTLEGHSSSVQSVAFSP--- 93
Query: 306 NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW 365
N Q AS D I++W+ + H+ V + + +G ++W
Sbjct: 94 NGQL--LASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG-----------QLW 140
Query: 366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQ- 423
+ G + T+EGH+ WV ++A S D + ++ K +D A KH L +
Sbjct: 141 NPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATC--GLKHTLGGHSN 198
Query: 424 -----AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR-MTGHQQLINCVEFSPDGRIIAS 477
P+G L SGS+D T+ LW+P SL + GH I + FSP+G+++AS
Sbjct: 199 WVLPLVFSPDGRLLASGSNDATIKLWDPPSG--SLKHTLEGHSNKIESLAFSPNGQLLAS 256
Query: 478 ASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE 537
S D +IKLWD G F TL+GH V V +S DS+LL SGS D+T+K+W+ T ++
Sbjct: 257 GSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILK 316
Query: 538 QDL--PG 542
+ PG
Sbjct: 317 HSMRTPG 323
Score = 255 (94.8 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 65/210 (30%), Positives = 96/210 (45%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
+M GH++ V SV FSPNG+ W+ + EGH WVL +A+SPD
Sbjct: 120 TMEGHSDRVESVAFSPNGQ------------LWNPAIGSLKHTIEGHSDWVLSVAFSPDG 167
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+ L SG I WDS+T + + GH W+ L + P R AS D I
Sbjct: 168 QLLASGSAEKTIKLWDSATCG-LKHTLGGHSNWVLPLVFSP-----DGRLLASGSNDATI 221
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++WD L H+ + + + +G L+ S S D TIK+W + G TL+GH+
Sbjct: 222 KLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHS 281
Query: 381 HWVNTLALSTDYLMRVEATSTGGFK-YDPA 409
V ++ S D + + K +DPA
Sbjct: 282 DMVLSVVFSPDSQLLESGSGDNTIKLWDPA 311
Score = 233 (87.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 60/179 (33%), Positives = 92/179 (51%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH++ V+SV FSP+G+ LASGS + T++ WD T C G + +
Sbjct: 150 TIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSAT------C-GLKHTLGGHSNW--- 199
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQV--RPVTRCTSSMPGHAEAVISVKFSPNGRSL 222
VLPL + + + A ++ P ++ GH+ + S+ FSPNG+ L
Sbjct: 200 ----VLPL-VFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLL 254
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
ASGS D T++ WD T + +GH VL + +SPDS+ L SG + I WD +TG
Sbjct: 255 ASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATG 313
Score = 229 (85.7 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 50/147 (34%), Positives = 78/147 (53%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+G L SGS+D T+ LW+P + GH + V FSP+G+++AS S D +IKL
Sbjct: 51 PDGRLLASGSNDTTIKLWDPASGGLKQT-LEGHSSSVQSVAFSPNGQLLASGSSDTTIKL 109
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
W+ T+ GH V VA+S + +L WN ++ + GH D
Sbjct: 110 WNSASDSLKHTMEGHSDRVESVAFSPNGQL------------WNPAIGSLKHTIEGHSDW 157
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLWQN 573
V +V ++PDG+ +ASG +K ++LW +
Sbjct: 158 VLSVAFSPDGQLLASGSAEKTIKLWDS 184
Score = 181 (68.8 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 41/129 (31%), Positives = 69/129 (53%)
Query: 179 EVVDIVYQKQAVFQVRPVTRCT-----SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRF 233
++VD + Q+ Q RP ++ GH++ + +V FSP+GR LASGS DTT++
Sbjct: 9 DIVDCINTLQSTLQ-RPKVEDNWGPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKL 67
Query: 234 WDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQ 293
WD + EGH V +A+SP+ + L SG + I W+S++ + M GH
Sbjct: 68 WDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDS-LKHTMEGHSD 126
Query: 294 WITALSWEP 302
+ ++++ P
Sbjct: 127 RVESVAFSP 135
Score = 172 (65.6 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 492 GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVD 551
G + TL GH + V +S D RLL SGS D+T+K+W+ + ++Q L GH V +V
Sbjct: 31 GPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVA 90
Query: 552 WAPDGEKVASGGKDKVLRLWQN 573
++P+G+ +ASG D ++LW +
Sbjct: 91 FSPNGQLLASGSSDTTIKLWNS 112
Score = 155 (59.6 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 34/101 (33%), Positives = 56/101 (55%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH+ +V SV FSPNG+ LASGS DTT++ W+ + + EGH V +A+SP
Sbjct: 78 TLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSP-- 135
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
NG + W+ + G + + GH W+ ++++ P
Sbjct: 136 --------NGQL--WNPAIGS-LKHTIEGHSDWVLSVAFSP 165
Score = 112 (44.5 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG 150
++ GH+ +V SV FSPNG+ LASGS DTT++ W+ + + EG
Sbjct: 78 TLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEG 123
Score = 111 (44.1 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 82 EVVDIVYQKQAVFQVRPVTRCT-----SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRF 136
++VD + Q+ Q RP ++ GH++ + +V FSP+GR LASGS DTT++
Sbjct: 9 DIVDCINTLQSTLQ-RPKVEDNWGPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKL 67
Query: 137 WD 138
WD
Sbjct: 68 WD 69
Score = 59 (25.8 bits), Expect = 4.5e-21, Sum P(2) = 4.5e-21
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 105 SMPGHAEAVISVKFSPNGR 123
+M GH++ V SV FSPNG+
Sbjct: 120 TMEGHSDRVESVAFSPNGQ 138
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 460 (167.0 bits), Expect = 5.0e-42, P = 5.0e-42
Identities = 114/374 (30%), Positives = 173/374 (46%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH AV SV FS + R LAS SGD TV+ WD T EGH WV + +S DS+ L
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLL 320
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
S +G + WD++TG + + ++GH + ++ + +H R AS D +RIW
Sbjct: 321 ASASDDGTVKIWDTATGT-LQRMLKGHNDSVRSVVF-----SHDSRLIASGSNDRTVRIW 374
Query: 325 DVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
+ H SV + + S + SAS +K+W G + LEGH V
Sbjct: 375 ETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCV 434
Query: 384 NTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ------AQCPEGEKLVSGSD 437
N+++ S D + A+ K A S + L + + + S SD
Sbjct: 435 NSVSFSPDSRLLASASDDRTVKIWHA-ATGSLQRTLEGHNDWVRSVVFSHDSRLIASASD 493
Query: 438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497
D T+ +W+ + H + V FS D R++ASAS D ++K+WD G T
Sbjct: 494 DMTVKIWDTATVPLQ-NNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENT 552
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGE 557
L GH V V++S DSRLL S S D T+K+W T ++ G G ++ ++
Sbjct: 553 LEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSN 612
Query: 558 KVASGGKDKVLRLW 571
+AS D +++W
Sbjct: 613 LLASAMDDGTVKIW 626
Score = 459 (166.6 bits), Expect = 6.4e-42, P = 6.4e-42
Identities = 113/339 (33%), Positives = 171/339 (50%)
Query: 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD 260
+++ GH E V SV FS + R LAS S D TV+ WD T T +GH V + +S D
Sbjct: 299 NTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHD 358
Query: 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
S+ + SG + + W+++TG + H+ + A+S+ H RR AS+ G
Sbjct: 359 SRLIASGSNDRTVRIWETTTGL-LRHTFEDHEDSVMAVSFA-----HDSRRLASASDGGN 412
Query: 321 IRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
++IWD VL H V + + S L+ SAS DRT+K+W A+ G + RTLEGH
Sbjct: 413 VKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGH 472
Query: 380 AHWVNTLALSTDYLMRVEATSTGGFK-YDPAN-PEESSKHALAKYQAQCP---EGEKLVS 434
WV ++ S D + A+ K +D A P +++ + + + L S
Sbjct: 473 NDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLAS 532
Query: 435 GSDDFTLFLWNPEKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK 493
SDD T+ +W + SL + GH +N V FSPD R++ASAS D ++K+W G
Sbjct: 533 ASDDMTVKIW--DTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGT 590
Query: 494 FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
T G + +A+S S LL S D T+K+W+M+
Sbjct: 591 VQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDME 629
Score = 444 (161.4 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 108/336 (32%), Positives = 167/336 (49%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL 305
+GH V +++S DS+ L S +G + WD++T + + GH +W+ ++ +
Sbjct: 260 KGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSF-LQNTLEGHNEWVKSVVF----- 313
Query: 306 NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKV 364
+H R AS+ DG ++IWD R+L H SV + + S LI S S DRT+++
Sbjct: 314 SHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRI 373
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQ 423
W + G++ T E H V ++ + D A+ G K +D S ++ L +
Sbjct: 374 WETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTG--SLQNVLEGHD 431
Query: 424 AQC-------PEGEKLVSGSDDFTLFLWNPEKEKKSLAR-MTGHQQLINCVEFSPDGRII 475
C P+ L S SDD T+ +W+ SL R + GH + V FS D R+I
Sbjct: 432 -DCVNSVSFSPDSRLLASASDDRTVKIWHAATG--SLQRTLEGHNDWVRSVVFSHDSRLI 488
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
ASAS D ++K+WD L H V V +S DSRLL S S D T+K+W+ T
Sbjct: 489 ASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGS 548
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+E L GH D V +V ++PD +AS D +++W
Sbjct: 549 LENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 369 (135.0 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 97/319 (30%), Positives = 158/319 (49%)
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
+SG K + + S+ Q +GH + + ++S+ +H R AS+ DG ++IW
Sbjct: 237 ISGIKCAPLQVYASALLFSPAQ-FKGHDRAVGSVSF-----SHDSRLLASASGDGTVKIW 290
Query: 325 DVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
D S L H V + + S L+ SAS D T+K+W + G + R L+GH V
Sbjct: 291 DTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSV 350
Query: 384 NTLALS----------TDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV 433
++ S D +R+ T+TG ++ + E+S +A A + +L
Sbjct: 351 RSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDS---VMAVSFAH--DSRRLA 405
Query: 434 SGSDDFTLFLWNPEKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG 492
S SD + +W + SL + GH +N V FSPD R++ASAS D+++K+W G
Sbjct: 406 SASDGGNVKIW--DTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATG 463
Query: 493 KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDW 552
TL GH V V +S DSRL+ S S D T+K+W+ T ++ +L H + V +V +
Sbjct: 464 SLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVF 523
Query: 553 APDGEKVASGGKDKVLRLW 571
+ D +AS D +++W
Sbjct: 524 SHDSRLLASASDDMTVKIW 542
Score = 321 (118.1 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 87/297 (29%), Positives = 139/297 (46%)
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
+ GH ++V SV FS + R +ASGS D TVR W+ TT E H+ V+ ++++ DS+
Sbjct: 343 LKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSR 402
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
+L S G + WD+ TG + + GH + ++S+ P R AS+ D ++
Sbjct: 403 RLASASDGGNVKIWDTRTGS-LQNVLEGHDDCVNSVSFSP-----DSRLLASASDDRTVK 456
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
IW R L H V + + S LI SAS D T+K+W + + LE H +
Sbjct: 457 IWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDN 516
Query: 382 WVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQAQC------PEGEKLVS 434
WV ++ S D + A+ K +D A S ++ L + + P+ L S
Sbjct: 517 WVRSVVFSHDSRLLASASDDMTVKIWDTATG--SLENTLEGHDDRVNSVSFSPDSRLLAS 574
Query: 435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491
SDD T+ +W G ++ + FS ++ASA D ++K+WD I
Sbjct: 575 ASDDGTVKIWYAATGTVQHT-FDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEI 630
Score = 251 (93.4 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 49/121 (40%), Positives = 73/121 (60%)
Query: 452 SLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS 511
S A+ GH + + V FS D R++ASAS D ++K+WD TL GH + V V +S
Sbjct: 255 SPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFS 314
Query: 512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
DSRLL S S D T+K+W+ T +++ L GH D V +V ++ D +ASG D+ +R+W
Sbjct: 315 HDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIW 374
Query: 572 Q 572
+
Sbjct: 375 E 375
Score = 239 (89.2 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 77/275 (28%), Positives = 119/275 (43%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-CEGHKHWVLCIAWSPD 260
++ GH + V SV FS + R +AS S D TV+ WD T PL E H +WV + +S D
Sbjct: 468 TLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTAT-VPLQNNLESHDNWVRSVVFSHD 526
Query: 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
S+ L S + + WD++TG + + GH + ++S+ P R AS+ DG
Sbjct: 527 SRLLASASDDMTVKIWDTATGS-LENTLEGHDDRVNSVSFSP-----DSRLLASASDDGT 580
Query: 321 IRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
++IW R + + S L+ SA D T+K+W + T +
Sbjct: 581 VKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTFDLD 640
Query: 380 AHWVNTLALSTDYLMRVEATSTGGFKYDP---ANPEESSKHALAKYQAQCPEGEKLVSG- 435
H + + D M T+ G + D A +S L + QAQ + G
Sbjct: 641 -HEIQRIQF--DKSMSSLITNVGRIQLDARSKATEGFASSQVLDRSQAQGHHPRRQGYGL 697
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP 470
SDDF+ WN + L G++ I+ V P
Sbjct: 698 SDDFSWITWNGDNV---LWLPPGYRPCISTVSVPP 729
Score = 224 (83.9 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 62/196 (31%), Positives = 94/196 (47%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTL 166
GH AV SV FS + R LAS SGD TV+ WD T EG ++ V + ++ L
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLL 320
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGS 226
A T+ + Q+ + GH ++V SV FS + R +ASGS
Sbjct: 321 ASASDDGTVKIWDTATGTLQRM--------------LKGHNDSVRSVVFSHDSRLIASGS 366
Query: 227 GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ 286
D TVR W+ TT E H+ V+ ++++ DS++L S G + WD+ TG +
Sbjct: 367 NDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGS-LQN 425
Query: 287 PMRGHKQWITALSWEP 302
+ GH + ++S+ P
Sbjct: 426 VLEGHDDCVNSVSFSP 441
Score = 189 (71.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 55/177 (31%), Positives = 87/177 (49%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITK 164
+ GH + V SV FSP+ R LAS S D TV+ W T + EG ++ V + ++
Sbjct: 427 LEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSR 486
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
+A ++++ ++ V P+ +++ H V SV FS + R LAS
Sbjct: 487 LIASA-------SDDMTVKIWDTATV----PLQ---NNLESHDNWVRSVVFSHDSRLLAS 532
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
S D TV+ WD T + EGH V +++SPDS+ L S +G + W ++TG
Sbjct: 533 ASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATG 589
Score = 158 (60.7 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 52/173 (30%), Positives = 78/173 (45%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH + V SV FS + R +AS S D TV+ WD T PL + + +V +
Sbjct: 468 TLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTAT-VPL-QNNLESHDNWVRSVVFSH 525
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
D L + + + V I + +++ GH + V SV FSP+ R LAS
Sbjct: 526 ---DSRLLASASDDMTVKIWDTATGSLE--------NTLEGHDDRVNSVSFSPDSRLLAS 574
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
S D TV+ W T T +G + +A+S S L S +G + WD
Sbjct: 575 ASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWD 627
Score = 97 (39.2 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
+ GH ++V SV FS + R +ASGS D TVR W+ TT
Sbjct: 343 LKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTT 378
Score = 91 (37.1 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT 143
+++ GH E V SV FS + R LAS S D TV+ WD T T
Sbjct: 299 NTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGT 338
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 343 (125.8 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 92/307 (29%), Positives = 151/307 (49%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
V+P ++ GH +AV SVKFSPNG LAS S D ++ W GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
+AWS DS LVS + + WD S+GK + + ++GH ++ ++ P Q
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 144
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
S D ++RIWDV +C++ L +H+ V+ + + G LI S+S D ++W + G
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 372 MCRTL-EGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQAQC--- 426
+TL + V+ + S + + AT K +D + + + K + C
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 264
Query: 427 ----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-- 480
G+ +VSGS+D +++WN + K+ + ++ GH ++ P IIASA+
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQT-KEIVQKLQGHTDVVISTACHPTENIIASAALEN 323
Query: 481 DKSIKLW 487
DK+IKLW
Sbjct: 324 DKTIKLW 330
Score = 316 (116.3 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 85/302 (28%), Positives = 149/302 (49%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+ GH + ++++ + P N + ASS D I+IW + + ++ H ++ + W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 348 GG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV--------NTLALST--DYLMRV 396
S L+ SAS D+T+K+W S G +TL+GH+++V + L +S D +R+
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
TG K P S + + +G +VS S D +W+ + +
Sbjct: 156 WDVKTG--KCLKTLPAHSDPVSAVHFNR---DGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SD 513
++ V+FSP+G+ I +A+ D ++KLWD GK + T GH Y + + +
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 270
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLW 571
+ +VSGS D+ + +WN++TK+I Q L GH D V + P +AS DK ++LW
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Query: 572 QN 573
++
Sbjct: 331 KS 332
Score = 262 (97.3 bits), Expect = 8.3e-22, P = 8.3e-22
Identities = 52/127 (40%), Positives = 77/127 (60%)
Query: 446 PEKEKKSLA-RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
P K +L + GH + ++ V+FSP+G +AS+S DK IK+W GKF T+ GH
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK 564
+ VAWSSDS LLVS S D TLK+W++ + K + L GH + V+ ++ P + SG
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 565 DKVLRLW 571
D+ +R+W
Sbjct: 150 DESVRIW 156
Score = 231 (86.4 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 60/203 (29%), Positives = 97/203 (47%)
Query: 375 TLEGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPEESSKHALAKYQ-AQCPEG 429
TL GH V+++ S + +++ K YD + S H L A +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 430 EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDG 489
LVS SDD TL +W+ K L + GH + C F+P +I S SFD+S+++WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 490 RIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL-PGHGDEVY 548
+ GK + TL H V V ++ D L+VS S D ++W+ + + + L V
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 549 AVDWAPDGEKVASGGKDKVLRLW 571
V ++P+G+ + + D L+LW
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLW 241
Score = 187 (70.9 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 65/268 (24%), Positives = 119/268 (44%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEIT 163
++ GH + V +S + L S S D T++ WDV++ L +G + Y+F N
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN--- 138
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
P L D + ++ V+ +C ++P H++ V +V F+ +G +
Sbjct: 139 -------PQSNLIVSGSFD---ESVRIWDVK-TGKCLKTLPAHSDPVSAVHFNRDGSLIV 187
Query: 224 SGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
S S D R WD + Q + V + +SP+ K +++ + + WD S GK
Sbjct: 188 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 247
Query: 283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV 342
+ + GHK + + F + + S +D + IW++ + V+ L HT V
Sbjct: 248 CL-KTYTGHKNEKYCI-FANFSVTGG-KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Query: 343 TCIRWGGS-GLIYSAS--QDRTIKVWRA 367
+ +I SA+ D+TIK+W++
Sbjct: 305 ISTACHPTENIIASAALENDKTIKLWKS 332
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 49/185 (26%), Positives = 78/185 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EGTPYLFYVN 158
+C ++P H++ V +V F+ +G + S S D R WD + L + P + +V
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 221
Query: 159 ETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEA--VISVKFS 216
+ K + LD NT ++ D Y K +C + GH I FS
Sbjct: 222 FSPNGKYIL-AATLD--NTLKLWD--YSKG---------KCLKTYTGHKNEKYCIFANFS 267
Query: 217 -PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC-KNG-VI 273
G+ + SGS D V W++ T+ + K +GH V+ A P + S +N I
Sbjct: 268 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI 327
Query: 274 HAWDS 278
W S
Sbjct: 328 KLWKS 332
Score = 101 (40.6 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 96 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFW 137
V+P ++ GH +AV SVKFSPNG LAS S D ++ W
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 343 (125.8 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 92/307 (29%), Positives = 151/307 (49%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
V+P ++ GH +AV SVKFSPNG LAS S D ++ W GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
+AWS DS LVS + + WD S+GK + + ++GH ++ ++ P Q
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 144
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
S D ++RIWDV +C++ L +H+ V+ + + G LI S+S D ++W + G
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 372 MCRTL-EGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQAQC--- 426
+TL + V+ + S + + AT K +D + + + K + C
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 264
Query: 427 ----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-- 480
G+ +VSGS+D +++WN + K+ + ++ GH ++ P IIASA+
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQT-KEIVQKLQGHTDVVISTACHPTENIIASAALEN 323
Query: 481 DKSIKLW 487
DK+IKLW
Sbjct: 324 DKTIKLW 330
Score = 316 (116.3 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 85/302 (28%), Positives = 149/302 (49%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+ GH + ++++ + P N + ASS D I+IW + + ++ H ++ + W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 348 GG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV--------NTLALST--DYLMRV 396
S L+ SAS D+T+K+W S G +TL+GH+++V + L +S D +R+
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
TG K P S + + +G +VS S D +W+ + +
Sbjct: 156 WDVKTG--KCLKTLPAHSDPVSAVHFNR---DGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SD 513
++ V+FSP+G+ I +A+ D ++KLWD GK + T GH Y + + +
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 270
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLW 571
+ +VSGS D+ + +WN++TK+I Q L GH D V + P +AS DK ++LW
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Query: 572 QN 573
++
Sbjct: 331 KS 332
Score = 262 (97.3 bits), Expect = 8.3e-22, P = 8.3e-22
Identities = 52/127 (40%), Positives = 77/127 (60%)
Query: 446 PEKEKKSLA-RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
P K +L + GH + ++ V+FSP+G +AS+S DK IK+W GKF T+ GH
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK 564
+ VAWSSDS LLVS S D TLK+W++ + K + L GH + V+ ++ P + SG
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 565 DKVLRLW 571
D+ +R+W
Sbjct: 150 DESVRIW 156
Score = 231 (86.4 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 60/203 (29%), Positives = 97/203 (47%)
Query: 375 TLEGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPEESSKHALAKYQ-AQCPEG 429
TL GH V+++ S + +++ K YD + S H L A +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 430 EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDG 489
LVS SDD TL +W+ K L + GH + C F+P +I S SFD+S+++WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 490 RIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL-PGHGDEVY 548
+ GK + TL H V V ++ D L+VS S D ++W+ + + + L V
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 549 AVDWAPDGEKVASGGKDKVLRLW 571
V ++P+G+ + + D L+LW
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLW 241
Score = 187 (70.9 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 65/268 (24%), Positives = 119/268 (44%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEIT 163
++ GH + V +S + L S S D T++ WDV++ L +G + Y+F N
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN--- 138
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
P L D + ++ V+ +C ++P H++ V +V F+ +G +
Sbjct: 139 -------PQSNLIVSGSFD---ESVRIWDVK-TGKCLKTLPAHSDPVSAVHFNRDGSLIV 187
Query: 224 SGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
S S D R WD + Q + V + +SP+ K +++ + + WD S GK
Sbjct: 188 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 247
Query: 283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV 342
+ + GHK + + F + + S +D + IW++ + V+ L HT V
Sbjct: 248 CL-KTYTGHKNEKYCI-FANFSVTGG-KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Query: 343 TCIRWGGS-GLIYSAS--QDRTIKVWRA 367
+ +I SA+ D+TIK+W++
Sbjct: 305 ISTACHPTENIIASAALENDKTIKLWKS 332
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 49/185 (26%), Positives = 78/185 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EGTPYLFYVN 158
+C ++P H++ V +V F+ +G + S S D R WD + L + P + +V
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 221
Query: 159 ETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEA--VISVKFS 216
+ K + LD NT ++ D Y K +C + GH I FS
Sbjct: 222 FSPNGKYIL-AATLD--NTLKLWD--YSKG---------KCLKTYTGHKNEKYCIFANFS 267
Query: 217 -PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC-KNG-VI 273
G+ + SGS D V W++ T+ + K +GH V+ A P + S +N I
Sbjct: 268 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI 327
Query: 274 HAWDS 278
W S
Sbjct: 328 KLWKS 332
Score = 101 (40.6 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 96 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFW 137
V+P ++ GH +AV SVKFSPNG LAS S D ++ W
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 343 (125.8 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 92/307 (29%), Positives = 151/307 (49%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
V+P ++ GH +AV SVKFSPNG LAS S D ++ W GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
+AWS DS LVS + + WD S+GK + + ++GH ++ ++ P Q
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 144
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
S D ++RIWDV +C++ L +H+ V+ + + G LI S+S D ++W + G
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 372 MCRTL-EGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQAQC--- 426
+TL + V+ + S + + AT K +D + + + K + C
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 264
Query: 427 ----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-- 480
G+ +VSGS+D +++WN + K+ + ++ GH ++ P IIASA+
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQT-KEIVQKLQGHTDVVISTACHPTENIIASAALEN 323
Query: 481 DKSIKLW 487
DK+IKLW
Sbjct: 324 DKTIKLW 330
Score = 316 (116.3 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 85/302 (28%), Positives = 149/302 (49%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+ GH + ++++ + P N + ASS D I+IW + + ++ H ++ + W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 348 GG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV--------NTLALST--DYLMRV 396
S L+ SAS D+T+K+W S G +TL+GH+++V + L +S D +R+
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
TG K P S + + +G +VS S D +W+ + +
Sbjct: 156 WDVKTG--KCLKTLPAHSDPVSAVHFNR---DGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SD 513
++ V+FSP+G+ I +A+ D ++KLWD GK + T GH Y + + +
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 270
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLW 571
+ +VSGS D+ + +WN++TK+I Q L GH D V + P +AS DK ++LW
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Query: 572 QN 573
++
Sbjct: 331 KS 332
Score = 262 (97.3 bits), Expect = 8.3e-22, P = 8.3e-22
Identities = 52/127 (40%), Positives = 77/127 (60%)
Query: 446 PEKEKKSLA-RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
P K +L + GH + ++ V+FSP+G +AS+S DK IK+W GKF T+ GH
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK 564
+ VAWSSDS LLVS S D TLK+W++ + K + L GH + V+ ++ P + SG
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 565 DKVLRLW 571
D+ +R+W
Sbjct: 150 DESVRIW 156
Score = 231 (86.4 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 60/203 (29%), Positives = 97/203 (47%)
Query: 375 TLEGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPEESSKHALAKYQ-AQCPEG 429
TL GH V+++ S + +++ K YD + S H L A +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 430 EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDG 489
LVS SDD TL +W+ K L + GH + C F+P +I S SFD+S+++WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 490 RIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL-PGHGDEVY 548
+ GK + TL H V V ++ D L+VS S D ++W+ + + + L V
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 549 AVDWAPDGEKVASGGKDKVLRLW 571
V ++P+G+ + + D L+LW
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLW 241
Score = 187 (70.9 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 65/268 (24%), Positives = 119/268 (44%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEIT 163
++ GH + V +S + L S S D T++ WDV++ L +G + Y+F N
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN--- 138
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
P L D + ++ V+ +C ++P H++ V +V F+ +G +
Sbjct: 139 -------PQSNLIVSGSFD---ESVRIWDVK-TGKCLKTLPAHSDPVSAVHFNRDGSLIV 187
Query: 224 SGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
S S D R WD + Q + V + +SP+ K +++ + + WD S GK
Sbjct: 188 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 247
Query: 283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV 342
+ + GHK + + F + + S +D + IW++ + V+ L HT V
Sbjct: 248 CL-KTYTGHKNEKYCI-FANFSVTGG-KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Query: 343 TCIRWGGS-GLIYSAS--QDRTIKVWRA 367
+ +I SA+ D+TIK+W++
Sbjct: 305 ISTACHPTENIIASAALENDKTIKLWKS 332
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 49/185 (26%), Positives = 78/185 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EGTPYLFYVN 158
+C ++P H++ V +V F+ +G + S S D R WD + L + P + +V
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 221
Query: 159 ETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEA--VISVKFS 216
+ K + LD NT ++ D Y K +C + GH I FS
Sbjct: 222 FSPNGKYIL-AATLD--NTLKLWD--YSKG---------KCLKTYTGHKNEKYCIFANFS 267
Query: 217 -PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC-KNG-VI 273
G+ + SGS D V W++ T+ + K +GH V+ A P + S +N I
Sbjct: 268 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI 327
Query: 274 HAWDS 278
W S
Sbjct: 328 KLWKS 332
Score = 101 (40.6 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 96 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFW 137
V+P ++ GH +AV SVKFSPNG LAS S D ++ W
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 343 (125.8 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 92/307 (29%), Positives = 151/307 (49%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
V+P ++ GH +AV SVKFSPNG LAS S D ++ W GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
+AWS DS LVS + + WD S+GK + + ++GH ++ ++ P Q
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 144
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
S D ++RIWDV +C++ L +H+ V+ + + G LI S+S D ++W + G
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 372 MCRTL-EGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQAQC--- 426
+TL + V+ + S + + AT K +D + + + K + C
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 264
Query: 427 ----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-- 480
G+ +VSGS+D +++WN + K+ + ++ GH ++ P IIASA+
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQT-KEIVQKLQGHTDVVISTACHPTENIIASAALEN 323
Query: 481 DKSIKLW 487
DK+IKLW
Sbjct: 324 DKTIKLW 330
Score = 316 (116.3 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 85/302 (28%), Positives = 149/302 (49%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+ GH + ++++ + P N + ASS D I+IW + + ++ H ++ + W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 348 GG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV--------NTLALST--DYLMRV 396
S L+ SAS D+T+K+W S G +TL+GH+++V + L +S D +R+
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
TG K P S + + +G +VS S D +W+ + +
Sbjct: 156 WDVKTG--KCLKTLPAHSDPVSAVHFNR---DGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SD 513
++ V+FSP+G+ I +A+ D ++KLWD GK + T GH Y + + +
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 270
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLW 571
+ +VSGS D+ + +WN++TK+I Q L GH D V + P +AS DK ++LW
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Query: 572 QN 573
++
Sbjct: 331 KS 332
Score = 262 (97.3 bits), Expect = 8.3e-22, P = 8.3e-22
Identities = 52/127 (40%), Positives = 77/127 (60%)
Query: 446 PEKEKKSLA-RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
P K +L + GH + ++ V+FSP+G +AS+S DK IK+W GKF T+ GH
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK 564
+ VAWSSDS LLVS S D TLK+W++ + K + L GH + V+ ++ P + SG
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 565 DKVLRLW 571
D+ +R+W
Sbjct: 150 DESVRIW 156
Score = 231 (86.4 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 60/203 (29%), Positives = 97/203 (47%)
Query: 375 TLEGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPEESSKHALAKYQ-AQCPEG 429
TL GH V+++ S + +++ K YD + S H L A +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 430 EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDG 489
LVS SDD TL +W+ K L + GH + C F+P +I S SFD+S+++WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 490 RIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL-PGHGDEVY 548
+ GK + TL H V V ++ D L+VS S D ++W+ + + + L V
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 549 AVDWAPDGEKVASGGKDKVLRLW 571
V ++P+G+ + + D L+LW
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLW 241
Score = 187 (70.9 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 65/268 (24%), Positives = 119/268 (44%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEIT 163
++ GH + V +S + L S S D T++ WDV++ L +G + Y+F N
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN--- 138
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
P L D + ++ V+ +C ++P H++ V +V F+ +G +
Sbjct: 139 -------PQSNLIVSGSFD---ESVRIWDVK-TGKCLKTLPAHSDPVSAVHFNRDGSLIV 187
Query: 224 SGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
S S D R WD + Q + V + +SP+ K +++ + + WD S GK
Sbjct: 188 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 247
Query: 283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV 342
+ + GHK + + F + + S +D + IW++ + V+ L HT V
Sbjct: 248 CL-KTYTGHKNEKYCI-FANFSVTGG-KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Query: 343 TCIRWGGS-GLIYSAS--QDRTIKVWRA 367
+ +I SA+ D+TIK+W++
Sbjct: 305 ISTACHPTENIIASAALENDKTIKLWKS 332
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 49/185 (26%), Positives = 78/185 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EGTPYLFYVN 158
+C ++P H++ V +V F+ +G + S S D R WD + L + P + +V
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 221
Query: 159 ETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEA--VISVKFS 216
+ K + LD NT ++ D Y K +C + GH I FS
Sbjct: 222 FSPNGKYIL-AATLD--NTLKLWD--YSKG---------KCLKTYTGHKNEKYCIFANFS 267
Query: 217 -PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC-KNG-VI 273
G+ + SGS D V W++ T+ + K +GH V+ A P + S +N I
Sbjct: 268 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI 327
Query: 274 HAWDS 278
W S
Sbjct: 328 KLWKS 332
Score = 101 (40.6 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 96 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFW 137
V+P ++ GH +AV SVKFSPNG LAS S D ++ W
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 343 (125.8 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 92/307 (29%), Positives = 151/307 (49%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
V+P ++ GH +AV SVKFSPNG LAS S D ++ W GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
+AWS DS LVS + + WD S+GK + + ++GH ++ ++ P Q
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 144
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
S D ++RIWDV +C++ L +H+ V+ + + G LI S+S D ++W + G
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 372 MCRTL-EGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQAQC--- 426
+TL + V+ + S + + AT K +D + + + K + C
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 264
Query: 427 ----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-- 480
G+ +VSGS+D +++WN + K+ + ++ GH ++ P IIASA+
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQT-KEIVQKLQGHTDVVISTACHPTENIIASAALEN 323
Query: 481 DKSIKLW 487
DK+IKLW
Sbjct: 324 DKTIKLW 330
Score = 316 (116.3 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 85/302 (28%), Positives = 149/302 (49%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+ GH + ++++ + P N + ASS D I+IW + + ++ H ++ + W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 348 GG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV--------NTLALST--DYLMRV 396
S L+ SAS D+T+K+W S G +TL+GH+++V + L +S D +R+
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
TG K P S + + +G +VS S D +W+ + +
Sbjct: 156 WDVKTG--KCLKTLPAHSDPVSAVHFNR---DGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SD 513
++ V+FSP+G+ I +A+ D ++KLWD GK + T GH Y + + +
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 270
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLW 571
+ +VSGS D+ + +WN++TK+I Q L GH D V + P +AS DK ++LW
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Query: 572 QN 573
++
Sbjct: 331 KS 332
Score = 262 (97.3 bits), Expect = 8.3e-22, P = 8.3e-22
Identities = 52/127 (40%), Positives = 77/127 (60%)
Query: 446 PEKEKKSLA-RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
P K +L + GH + ++ V+FSP+G +AS+S DK IK+W GKF T+ GH
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK 564
+ VAWSSDS LLVS S D TLK+W++ + K + L GH + V+ ++ P + SG
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 565 DKVLRLW 571
D+ +R+W
Sbjct: 150 DESVRIW 156
Score = 231 (86.4 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 60/203 (29%), Positives = 97/203 (47%)
Query: 375 TLEGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPEESSKHALAKYQ-AQCPEG 429
TL GH V+++ S + +++ K YD + S H L A +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 430 EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDG 489
LVS SDD TL +W+ K L + GH + C F+P +I S SFD+S+++WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 490 RIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL-PGHGDEVY 548
+ GK + TL H V V ++ D L+VS S D ++W+ + + + L V
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 549 AVDWAPDGEKVASGGKDKVLRLW 571
V ++P+G+ + + D L+LW
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLW 241
Score = 187 (70.9 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 65/268 (24%), Positives = 119/268 (44%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEIT 163
++ GH + V +S + L S S D T++ WDV++ L +G + Y+F N
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN--- 138
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
P L D + ++ V+ +C ++P H++ V +V F+ +G +
Sbjct: 139 -------PQSNLIVSGSFD---ESVRIWDVK-TGKCLKTLPAHSDPVSAVHFNRDGSLIV 187
Query: 224 SGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
S S D R WD + Q + V + +SP+ K +++ + + WD S GK
Sbjct: 188 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 247
Query: 283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV 342
+ + GHK + + F + + S +D + IW++ + V+ L HT V
Sbjct: 248 CL-KTYTGHKNEKYCI-FANFSVTGG-KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Query: 343 TCIRWGGS-GLIYSAS--QDRTIKVWRA 367
+ +I SA+ D+TIK+W++
Sbjct: 305 ISTACHPTENIIASAALENDKTIKLWKS 332
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 49/185 (26%), Positives = 78/185 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EGTPYLFYVN 158
+C ++P H++ V +V F+ +G + S S D R WD + L + P + +V
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 221
Query: 159 ETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEA--VISVKFS 216
+ K + LD NT ++ D Y K +C + GH I FS
Sbjct: 222 FSPNGKYIL-AATLD--NTLKLWD--YSKG---------KCLKTYTGHKNEKYCIFANFS 267
Query: 217 -PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC-KNG-VI 273
G+ + SGS D V W++ T+ + K +GH V+ A P + S +N I
Sbjct: 268 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI 327
Query: 274 HAWDS 278
W S
Sbjct: 328 KLWKS 332
Score = 101 (40.6 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 96 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFW 137
V+P ++ GH +AV SVKFSPNG LAS S D ++ W
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 343 (125.8 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 92/307 (29%), Positives = 151/307 (49%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
V+P ++ GH +AV SVKFSPNG LAS S D ++ W GHK +
Sbjct: 5 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 64
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
+AWS DS LVS + + WD S+GK + + ++GH ++ ++ P Q
Sbjct: 65 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 118
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
S D ++RIWDV +C++ L +H+ V+ + + G LI S+S D ++W + G
Sbjct: 119 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 178
Query: 372 MCRTL-EGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQAQC--- 426
+TL + V+ + S + + AT K +D + + + K + C
Sbjct: 179 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 238
Query: 427 ----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-- 480
G+ +VSGS+D +++WN + K+ + ++ GH ++ P IIASA+
Sbjct: 239 NFSVTGGKWIVSGSEDNLVYIWNLQT-KEIVQKLQGHTDVVISTACHPTENIIASAALEN 297
Query: 481 DKSIKLW 487
DK+IKLW
Sbjct: 298 DKTIKLW 304
Score = 316 (116.3 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 85/302 (28%), Positives = 149/302 (49%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+ GH + ++++ + P N + ASS D I+IW + + ++ H ++ + W
Sbjct: 15 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 69
Query: 348 GG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV--------NTLALST--DYLMRV 396
S L+ SAS D+T+K+W S G +TL+GH+++V + L +S D +R+
Sbjct: 70 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 129
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
TG K P S + + +G +VS S D +W+ + +
Sbjct: 130 WDVKTG--KCLKTLPAHSDPVSAVHFNR---DGSLIVSSSYDGLCRIWDTASGQCLKTLI 184
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SD 513
++ V+FSP+G+ I +A+ D ++KLWD GK + T GH Y + + +
Sbjct: 185 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 244
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLW 571
+ +VSGS D+ + +WN++TK+I Q L GH D V + P +AS DK ++LW
Sbjct: 245 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Query: 572 QN 573
++
Sbjct: 305 KS 306
Score = 262 (97.3 bits), Expect = 8.3e-22, P = 8.3e-22
Identities = 52/127 (40%), Positives = 77/127 (60%)
Query: 446 PEKEKKSLA-RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
P K +L + GH + ++ V+FSP+G +AS+S DK IK+W GKF T+ GH
Sbjct: 4 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 63
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK 564
+ VAWSSDS LLVS S D TLK+W++ + K + L GH + V+ ++ P + SG
Sbjct: 64 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 123
Query: 565 DKVLRLW 571
D+ +R+W
Sbjct: 124 DESVRIW 130
Score = 187 (70.9 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 65/268 (24%), Positives = 119/268 (44%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEIT 163
++ GH + V +S + L S S D T++ WDV++ L +G + Y+F N
Sbjct: 56 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN--- 112
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
P L D + ++ V+ +C ++P H++ V +V F+ +G +
Sbjct: 113 -------PQSNLIVSGSFD---ESVRIWDVK-TGKCLKTLPAHSDPVSAVHFNRDGSLIV 161
Query: 224 SGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
S S D R WD + Q + V + +SP+ K +++ + + WD S GK
Sbjct: 162 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 221
Query: 283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV 342
+ + GHK + + F + + S +D + IW++ + V+ L HT V
Sbjct: 222 CL-KTYTGHKNEKYCI-FANFSVTGG-KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 278
Query: 343 TCIRWGGS-GLIYSAS--QDRTIKVWRA 367
+ +I SA+ D+TIK+W++
Sbjct: 279 ISTACHPTENIIASAALENDKTIKLWKS 306
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 49/185 (26%), Positives = 78/185 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EGTPYLFYVN 158
+C ++P H++ V +V F+ +G + S S D R WD + L + P + +V
Sbjct: 136 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 195
Query: 159 ETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEA--VISVKFS 216
+ K + LD NT ++ D Y K +C + GH I FS
Sbjct: 196 FSPNGKYIL-AATLD--NTLKLWD--YSKG---------KCLKTYTGHKNEKYCIFANFS 241
Query: 217 -PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC-KNG-VI 273
G+ + SGS D V W++ T+ + K +GH V+ A P + S +N I
Sbjct: 242 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI 301
Query: 274 HAWDS 278
W S
Sbjct: 302 KLWKS 306
Score = 101 (40.6 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 96 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFW 137
V+P ++ GH +AV SVKFSPNG LAS S D ++ W
Sbjct: 5 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 46
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 346 (126.9 bits), Expect = 4.9e-31, P = 4.9e-31
Identities = 92/307 (29%), Positives = 151/307 (49%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
V+P ++ GH +AV SVKFSPNG LAS S D ++ W GHK +
Sbjct: 31 VKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
+AWS DS LVS + + WD S+GK + + ++GH ++ ++ P Q
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 144
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
S D ++RIWDV +C++ L +H+ V+ + + G LI S+S D ++W + G
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 372 MCRTL-EGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQAQC--- 426
+TL + V+ + S + + AT K +D + + + K + C
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFA 264
Query: 427 ----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-- 480
G+ +VSGS+D +++WN + K+ + ++ GH ++ P IIASA+
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQT-KEVVQKLQGHTDVVISTACHPTENIIASAALEN 323
Query: 481 DKSIKLW 487
DK+IKLW
Sbjct: 324 DKTIKLW 330
Score = 306 (112.8 bits), Expect = 6.0e-35, Sum P(2) = 6.0e-35
Identities = 83/302 (27%), Positives = 148/302 (49%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+ GH + ++++ + P N + ASS D I+IW + + ++ H ++ + W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 348 GG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV--------NTLALST--DYLMRV 396
S L+ SAS D+T+K+W S G +TL+GH+++V + L +S D +R+
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
TG K P S + + +G +VS S D +W+ + +
Sbjct: 156 WDVKTG--KCLKTLPAHSDPVSAVHFNR---DGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SD 513
++ V+FSP+G+ I +A+ D ++KLWD GK + T H Y + + +
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTG 270
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLW 571
+ +VSGS D+ + +WN++TK++ Q L GH D V + P +AS DK ++LW
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Query: 572 QN 573
++
Sbjct: 331 KS 332
Score = 262 (97.3 bits), Expect = 8.3e-22, P = 8.3e-22
Identities = 52/127 (40%), Positives = 77/127 (60%)
Query: 446 PEKEKKSLA-RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
P K +L + GH + ++ V+FSP+G +AS+S DK IK+W GKF T+ GH
Sbjct: 30 PVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 89
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK 564
+ VAWSSDS LLVS S D TLK+W++ + K + L GH + V+ ++ P + SG
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 565 DKVLRLW 571
D+ +R+W
Sbjct: 150 DESVRIW 156
Score = 231 (86.4 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 60/203 (29%), Positives = 97/203 (47%)
Query: 375 TLEGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPEESSKHALAKYQ-AQCPEG 429
TL GH V+++ S + +++ K YD + S H L A +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 430 EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDG 489
LVS SDD TL +W+ K L + GH + C F+P +I S SFD+S+++WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 490 RIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL-PGHGDEVY 548
+ GK + TL H V V ++ D L+VS S D ++W+ + + + L V
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 549 AVDWAPDGEKVASGGKDKVLRLW 571
V ++P+G+ + + D L+LW
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLW 241
Score = 178 (67.7 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 64/268 (23%), Positives = 118/268 (44%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEIT 163
++ GH + V +S + L S S D T++ WDV++ L +G + Y+F N
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN--- 138
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
P L D + ++ V+ +C ++P H++ V +V F+ +G +
Sbjct: 139 -------PQSNLIVSGSFD---ESVRIWDVK-TGKCLKTLPAHSDPVSAVHFNRDGSLIV 187
Query: 224 SGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
S S D R WD + Q + V + +SP+ K +++ + + WD S GK
Sbjct: 188 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 247
Query: 283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV 342
+ + HK + + F + + S +D + IW++ + V+ L HT V
Sbjct: 248 CL-KTYTCHKNEKYCI-FANFSVTGG-KWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVV 304
Query: 343 TCIRWGGS-GLIYSAS--QDRTIKVWRA 367
+ +I SA+ D+TIK+W++
Sbjct: 305 ISTACHPTENIIASAALENDKTIKLWKS 332
Score = 101 (40.6 bits), Expect = 6.0e-35, Sum P(2) = 6.0e-35
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 96 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFW 137
V+P ++ GH +AV SVKFSPNG LAS S D ++ W
Sbjct: 31 VKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 361 (132.1 bits), Expect = 1.0e-32, P = 1.0e-32
Identities = 93/307 (30%), Positives = 153/307 (49%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
V+P ++ GH +AV +VKFSPNG LAS S D ++ W GHK +
Sbjct: 58 VKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 117
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
+AWS DS+ LVSG + + W+ STGK + + ++GH ++ ++ P Q
Sbjct: 118 SDVAWSSDSRLLVSGSDDKTLKVWELSTGKSL-KTLKGHSNYVFCCNFNP-----QSNLI 171
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
S D ++RIWDV +C++ L +H+ V+ + + G LI S+S D ++W + G
Sbjct: 172 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 231
Query: 372 MCRTL-EGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQAQC--- 426
+TL + V+ + S + + AT K +D + + + K + C
Sbjct: 232 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 291
Query: 427 ----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-- 480
G+ +VSGS+D +++WN + K+ + ++ GH + C P IIASA+
Sbjct: 292 NFSVTGGKWIVSGSEDNMVYIWNLQS-KEVVQKLQGHTDTVLCTACHPTENIIASAALEN 350
Query: 481 DKSIKLW 487
DK+IKLW
Sbjct: 351 DKTIKLW 357
Score = 308 (113.5 bits), Expect = 7.3e-35, Sum P(2) = 7.3e-35
Identities = 84/302 (27%), Positives = 147/302 (48%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+ GH + ++A+ + P N + ASS D I+IW + + ++ H ++ + W
Sbjct: 68 LAGHTKAVSAVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 122
Query: 348 GG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV--------NTLALST--DYLMRV 396
S L+ S S D+T+KVW S G +TL+GH+++V + L +S D +R+
Sbjct: 123 SSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 182
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
TG K P S + + +G +VS S D +W+ + +
Sbjct: 183 WDVRTG--KCLKTLPAHSDPVSAVHFNR---DGSLIVSSSYDGLCRIWDTASGQCLKTLI 237
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SD 513
++ V+FSP+G+ I +A+ D ++KLWD GK + T GH Y + + +
Sbjct: 238 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 297
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLW 571
+ +VSGS D+ + +WN+++K++ Q L GH D V P +AS DK ++LW
Sbjct: 298 GKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Query: 572 QN 573
++
Sbjct: 358 KS 359
Score = 211 (79.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 68/268 (25%), Positives = 123/268 (45%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEIT 163
++ GH + V +S + R L SGS D T++ W+++T L +G + Y+F N
Sbjct: 109 TISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFN--- 165
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
P L D + ++ VR +C ++P H++ V +V F+ +G +
Sbjct: 166 -------PQSNLIVSGSFD---ESVRIWDVR-TGKCLKTLPAHSDPVSAVHFNRDGSLIV 214
Query: 224 SGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
S S D R WD + Q + V + +SP+ K +++ + + WD S GK
Sbjct: 215 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 274
Query: 283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV 342
+ + GHK + + F + + S +D + IW++ + V+ L HT +V
Sbjct: 275 CL-KTYTGHKNEKYCI-FANFSVTGG-KWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTV 331
Query: 343 TCIRWGGS-GLIYSAS--QDRTIKVWRA 367
C + +I SA+ D+TIK+W++
Sbjct: 332 LCTACHPTENIIASAALENDKTIKLWKS 359
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
+SAS S+ + KF TL GH +AV V +S + L S SAD +K+W K
Sbjct: 48 SSASNKSSLSVKPNYTLKF--TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGK 105
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
E+ + GH + V W+ D + SG DK L++W+
Sbjct: 106 FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWE 142
Score = 140 (54.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 53/195 (27%), Positives = 84/195 (43%)
Query: 93 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EG 150
++ VR +C ++P H++ V +V F+ +G + S S D R WD + L +
Sbjct: 182 IWDVR-TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 240
Query: 151 TPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEA- 209
P + +V + K + LD NT ++ D Y K +C + GH
Sbjct: 241 NPPVSFVKFSPNGKYIL-AATLD--NTLKLWD--YSKG---------KCLKTYTGHKNEK 286
Query: 210 -VISVKFS-PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG 267
I FS G+ + SGS D V W++ ++ + K +GH VLC A P + S
Sbjct: 287 YCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASA 346
Query: 268 C-KNG-VIHAWDSST 280
+N I W S T
Sbjct: 347 ALENDKTIKLWKSDT 361
Score = 98 (39.6 bits), Expect = 7.3e-35, Sum P(2) = 7.3e-35
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 96 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFW 137
V+P ++ GH +AV +VKFSPNG LAS S D ++ W
Sbjct: 58 VKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIW 99
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 353 (129.3 bits), Expect = 8.2e-32, P = 8.2e-32
Identities = 85/301 (28%), Positives = 157/301 (52%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH +++ SVKFSP+G+ LAS S D T++ W EGHK + IAWS DS
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS 100
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K + S + I WD +GK + + ++GHK+++ +S+ P Q S D +
Sbjct: 101 KLICSASDDKTIKIWDVESGKMV-KTLKGHKEYVFGVSFNP-----QSNLIVSGSFDENV 154
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL---E 377
RIWDV +C +++++H+ VT + + G L+ S S D T+++W + G + T+ +
Sbjct: 155 RIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTED 214
Query: 378 G-HAHWVN-------TLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL-AKYQAQCPE 428
G +V LA + D +R+ + + ++ K+ + + + C
Sbjct: 215 GKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTC-- 272
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF--DKSIKL 486
G+ +V+GS+D ++++N + ++ + + GH+ ++ V P IIAS + D+S+K+
Sbjct: 273 GKWIVTGSEDNLIYIYNLQT-REIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKI 331
Query: 487 W 487
W
Sbjct: 332 W 332
Score = 304 (112.1 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 83/299 (27%), Positives = 148/299 (49%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
++GH + I+++ + P + AS+ D I+IW + R L H ++ I W
Sbjct: 42 LKGHLKSISSVKFSP-----DGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAW 96
Query: 348 G-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKY 406
S LI SAS D+TIK+W G M +TL+GH +V ++ + + V + +
Sbjct: 97 SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRI 156
Query: 407 DPANPEESSKHALAKYQAQCP-----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
N E +K A +G +VSGS D T+ +W+ + T +
Sbjct: 157 WDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGK 216
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWD-GRIGKFITTLRGHVQAVYMVAWSSDS----RL 516
++ V+FSP+G+ + + + D +++LW K + T GH Y + +S+ S +
Sbjct: 217 EVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCI-FSTFSVTCGKW 275
Query: 517 LVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
+V+GS D+ + ++N++T++I Q L GH D V V P +ASG KD+ +++W++
Sbjct: 276 IVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIWKH 334
Score = 285 (105.4 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 82/303 (27%), Positives = 142/303 (46%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
+ +GH + + +SPD K L S + I W + GK + + GHK+ I+ ++W
Sbjct: 40 YTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGK-FERTLEGHKEGISDIAW-- 96
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDRT 361
+ + S+ D I+IWDV + V+ L H V + + S LI S S D
Sbjct: 97 ---SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDEN 153
Query: 362 IKVWRASDGVMCRTLEGHAHWVN--------TLALSTDY--LMRVEATSTGGFKYDPANP 411
+++W + G + + H+ V TL +S Y +R+ T+TG + +
Sbjct: 154 VRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQL-LNTIST 212
Query: 412 EESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS 469
E+ + + K+ P G+ +++G+ D TL LW+ KK L TGH+ C+ FS
Sbjct: 213 EDGKEVSFVKFS---PNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFS 269
Query: 470 PD-GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA--DSTL 526
G+ I + S D I +++ + + + TL GH V VA ++ SG+ D ++
Sbjct: 270 VTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSV 329
Query: 527 KVW 529
K+W
Sbjct: 330 KIW 332
Score = 278 (102.9 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 59/164 (35%), Positives = 96/164 (58%)
Query: 408 PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE 467
PA+ SS + + Q Q P+ + + + ++ L K +L GH + I+ V+
Sbjct: 5 PASMSSSSSYLYQEQQQQQPQQTESIPQTPNYIL--------KYTLK---GHLKSISSVK 53
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527
FSPDG+ +ASAS DK+IK+W GKF TL GH + + +AWS DS+L+ S S D T+K
Sbjct: 54 FSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIK 113
Query: 528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+W++++ K+ + L GH + V+ V + P + SG D+ +R+W
Sbjct: 114 IWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIW 157
Score = 211 (79.3 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 74/294 (25%), Positives = 134/294 (45%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFW---DVTTQTPLF-KCEGTPYLFYVNET 160
++ GH +++ SVKFSP+G+ LAS S D T++ W D + L EG + + ++
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS 100
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
++ + +D D T ++ D+ K ++ GH E V V F+P
Sbjct: 101 KLICSASD----D--KTIKIWDVESGKMV-----------KTLKGHKEYVFGVSFNPQSN 143
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ SGS D VR WDV T H V + ++ D +VSG +G + WD++T
Sbjct: 144 LIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTT 203
Query: 281 GKQIGQPMRGHKQWITALSWEP---F----HLNHQCRRFASSGKDGAIRIWDVILSQCVR 333
G+ + + ++ + + P F L++ R ++ + ++ + ++
Sbjct: 204 GQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYC 263
Query: 334 VLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLA 387
+ + T SVTC +W I + S+D I ++ + +TL GH V T+A
Sbjct: 264 IFS--TFSVTCGKW-----IVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVA 310
Score = 169 (64.5 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 61/233 (26%), Positives = 100/233 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ--TPLFKCEGTPYLFYVN 158
+ ++ GH E V V F+P + SGS D VR WDV T T + P V
Sbjct: 121 KMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDP----VT 176
Query: 159 ETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN 218
+ V+ T + D + + S+ G + V VKFSPN
Sbjct: 177 GVHFNRDGTLVVSGSYDGTVRIWDTTTGQ--------LLNTISTEDG--KEVSFVKFSPN 226
Query: 219 GRSLASGSGDTTVRFWDVTTQTPLFKC-EGHKHWVLCI--AWSPD-SKQLVSGCKNGVIH 274
G+ + +G+ D T+R W K GHK+ CI +S K +V+G ++ +I+
Sbjct: 227 GKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIY 286
Query: 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG---KDGAIRIW 324
++ T ++I Q + GH+ + ++ P +SG KD +++IW
Sbjct: 287 IYNLQT-REIVQTLAGHEDVVLTVACHP------TENIIASGALEKDRSVKIW 332
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 322 (118.4 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 87/299 (29%), Positives = 147/299 (49%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH+ A+ SVKFSPNG LAS + D + W GH + +AWS DS
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDS 93
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+LVS + + WD +GK + + ++GH ++ + P S D ++
Sbjct: 94 SRLVSASDDKTLKVWDMRSGKCL-KTLKGHSDFVFCCDFNP-----PSNLIVSGSFDESV 147
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL--EG 378
+IW+V +C++ L++H+ ++ + + +G LI S S D ++W A+ G RTL EG
Sbjct: 148 KIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEG 207
Query: 379 HAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQAQC------PEGEK 431
+ V+ + S + + AT K +D + + K + C G K
Sbjct: 208 NPP-VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRK 266
Query: 432 -LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF--DKSIKLW 487
+VSGS+D +++WN + K+ + R+ GH ++ P IIASA+ DK+IK+W
Sbjct: 267 WVVSGSEDNMVYIWNLQT-KEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 303 (111.7 bits), Expect = 2.8e-26, P = 2.8e-26
Identities = 87/300 (29%), Positives = 146/300 (48%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+ GH I+++ + P N + ASS D I IW C + L H+ ++ + W
Sbjct: 35 LAGHSAAISSVKFSP---NGEW--LASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAW 89
Query: 348 GG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKY 406
S + SAS D+T+KVW G +TL+GH+ +V + + V + K
Sbjct: 90 SSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKI 149
Query: 407 DPANPEESSK----HA--LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK--KSLARMTG 458
+ K H+ ++ C G +VSGS D +W+ + ++LA G
Sbjct: 150 WEVKTGKCLKTLSAHSDPISAVNFNC-NGSLIVSGSYDGLCRIWDAASGQCLRTLAD-EG 207
Query: 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV--AWSSDSRL 516
+ ++ V+FSP+G+ I +A+ D ++KLWD G+ + T GH Y + ++S R
Sbjct: 208 NPP-VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRK 266
Query: 517 -LVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
+VSGS D+ + +WN++TK+I Q L GH D V + P +AS DK +++W +
Sbjct: 267 WVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWSS 326
Score = 250 (93.1 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 60/173 (34%), Positives = 92/173 (53%)
Query: 407 DPANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKE--KKSLARMTG 458
+P P + + LA + A P GE L S + D + +W KK+L G
Sbjct: 23 EPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLY---G 79
Query: 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV 518
H I+ V +S D + SAS DK++K+WD R GK + TL+GH V+ ++ S L+V
Sbjct: 80 HSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIV 139
Query: 519 SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
SGS D ++K+W +KT K + L H D + AV++ +G + SG D + R+W
Sbjct: 140 SGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIW 192
Score = 244 (91.0 bits), Expect = 7.5e-20, P = 7.5e-20
Identities = 53/129 (41%), Positives = 76/129 (58%)
Query: 446 PEKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
P+K +L R+T GH I+ V+FSP+G +AS++ D I +W G TL GH
Sbjct: 24 PQKPNYAL-RLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSL 82
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ VAWSSDS LVS S D TLKVW+M++ K + L GH D V+ D+ P + SG
Sbjct: 83 EISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGS 142
Query: 564 KDKVLRLWQ 572
D+ +++W+
Sbjct: 143 FDESVKIWE 151
Score = 232 (86.7 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 66/287 (22%), Positives = 131/287 (45%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH+ A+ SVKFSPNG LAS + D + W C+ T Y + +++
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGN----CKKTLYGHSLEISDVAW 89
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
+ +D L + + ++ + V+ +R +C ++ GH++ V F+P + S
Sbjct: 90 S-SDSSRLVSASDDKTLK-------VWDMRS-GKCLKTLKGHSDFVFCCDFNPPSNLIVS 140
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
GS D +V+ W+V T L H + + ++ + +VSG +G+ WD+++G+ +
Sbjct: 141 GSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCL 200
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
+ + +S+ F N + ++ D +++WD +C++ T H C
Sbjct: 201 -RTLADEGN--PPVSFVKFSPNG--KYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYC 255
Query: 345 IRWG----GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLA 387
+ G + S S+D + +W + + L+GH V + A
Sbjct: 256 LFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAA 302
Score = 199 (75.1 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 71/275 (25%), Positives = 127/275 (46%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNET 160
C ++ GH+ + V +S + L S S D T++ WD+ + L +G + ++F
Sbjct: 73 CKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVF----- 127
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
D P L D + +++V+ +C ++ H++ + +V F+ NG
Sbjct: 128 -----CCDFNPPSNLIVSGSFD---ESVKIWEVK-TGKCLKTLSAHSDPISAVNFNCNGS 178
Query: 221 SLASGSGDTTVRFWDVTTQTPL--FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS 278
+ SGS D R WD + L EG+ V + +SP+ K +++ + + WD
Sbjct: 179 LIVSGSYDGLCRIWDAASGQCLRTLADEGNPP-VSFVKFSPNGKYILTATLDNTLKLWDY 237
Query: 279 STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG-KDGAIRIWDVILSQCVRVLTS 337
S G+ + + GHK L + F + R++ SG +D + IW++ + V+ L
Sbjct: 238 SRGRCL-KTYTGHKNEKYCL-FASFSVTG--RKWVVSGSEDNMVYIWNLQTKEIVQRLQG 293
Query: 338 HTRSVTCIRWGGS-GLIYSAS--QDRTIKVWRASD 369
HT V + +I SA+ D+TIKVW +SD
Sbjct: 294 HTDVVISAACHPTKNIIASAALENDKTIKVW-SSD 327
Score = 138 (53.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 51/193 (26%), Positives = 84/193 (43%)
Query: 93 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL--FKCEG 150
+++V+ +C ++ H++ + +V F+ NG + SGS D R WD + L EG
Sbjct: 149 IWEVK-TGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEG 207
Query: 151 TPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEA- 209
P + +V + K + LD NT ++ D Y + RC + GH
Sbjct: 208 NPPVSFVKFSPNGKYILTAT-LD--NTLKLWD--YSRG---------RCLKTYTGHKNEK 253
Query: 210 -VISVKFSPNGRS-LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG 267
+ FS GR + SGS D V W++ T+ + + +GH V+ A P + S
Sbjct: 254 YCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASA 313
Query: 268 C-KNG-VIHAWDS 278
+N I W S
Sbjct: 314 ALENDKTIKVWSS 326
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 238 (88.8 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 66/247 (26%), Positives = 115/247 (46%)
Query: 343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL---STDYLMR---- 395
TC+ G+ LI + S+D+T+++W A+ GH + +A S + +
Sbjct: 409 TCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGD 468
Query: 396 --VEATSTGGFKYDPANPEE-SSKHALAKYQAQC-----PEGEKLV-SGSDDFTLFLWNP 446
++ S G D P ++ +A + + LV +GS+D T +W
Sbjct: 469 RTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRL 528
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
+ + + GH++ I VEFS + + +AS DK++K+W G + T GH +V
Sbjct: 529 P-DLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVL 587
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
++ +D VS AD LK+WN+ T + H D+V+A+ E +A+GG D
Sbjct: 588 RASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDA 647
Query: 567 VLRLWQN 573
V+ LW +
Sbjct: 648 VINLWHD 654
Score = 234 (87.4 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 94/391 (24%), Positives = 165/391 (42%)
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW 257
+C S GH V+ + +G LA+ D V WDV GHK V I +
Sbjct: 93 KCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILF 152
Query: 258 SPDSKQ--LVSGCKNGVIHAWD---SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
PDS + L+SG + + WD +T K+ M H +T+++ L+
Sbjct: 153 HPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIA-----LSEDGLTL 207
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHT--RSVTCIRWGGSGLIYSASQDRTIKVWRASDG 370
S+G+D + +WD+ C + ++ +VT + G + AS D+ + SD
Sbjct: 208 FSAGRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGTPFASFVASLDQKKSKKKESDS 267
Query: 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE 430
+ V + S + E S+ ++ +E SK A P
Sbjct: 268 QATYFITVGERGVVRIWKSEGSICLYEQKSSD---ITVSSDDEESKRGFTA-AAMLPSDH 323
Query: 431 KLVSGSDDFTLFLW----NPEKEKKSLA-RMTGHQQLINCVEFSPDG-RIIASASFDKSI 484
L+ + D F + N E+ + L+ R+ G+ + I ++F D + +A A+ + +
Sbjct: 324 GLLCVTADQQFFFYSVVENVEETELVLSKRLVGYNEEIADMKFLGDEEQFLAVATNLEEV 383
Query: 485 KLWDGRIGKFITTLRGHVQAVYMV---AWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP 541
+++D L GH + V + SS + L+V+GS D T+++WN +K
Sbjct: 384 RVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGT 443
Query: 542 GHGDEVYAVDWAPDGEKV-ASGGKDKVLRLW 571
GH ++ AV +A SG D+ L++W
Sbjct: 444 GHNGDILAVAFAKKSFSFFVSGSGDRTLKVW 474
Score = 169 (64.5 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 74/326 (22%), Positives = 135/326 (41%)
Query: 60 VNETEI--TKTLA----DVLPLDTLNTEE---VVDIVYQKQAVFQVRPVTRCTSSMPGHA 110
V ETE+ +K L ++ + L EE V ++ V+ V ++ C+ + GH
Sbjct: 343 VEETELVLSKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMS-CSYVLAGHK 401
Query: 111 EAVISVK--FSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
E V+S+ S +G L +GS D TVR W+ T+++ + GT + + K
Sbjct: 402 EVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGV--GTGHNGDILAVAFAKKSF 459
Query: 168 DVLPLD----TLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
TL + I + ++ TR S + H + + SV + N +
Sbjct: 460 SFFVSGSGDRTLKVWSLDGISEDSEEPINLK--TR--SVVAAHDKDINSVAVARNDSLVC 515
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
+GS D T W + + +GHK + + +S + +++ + + W S G
Sbjct: 516 TGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSC 575
Query: 284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT 343
+ + GH + S+ +F S G DG +++W+V S+C+ H V
Sbjct: 576 L-KTFEGHTSSVLRASFIT-----DGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVW 629
Query: 344 CIRWGG-SGLIYSASQDRTIKVWRAS 368
+ G + +I + D I +W S
Sbjct: 630 ALAVGKKTEMIATGGGDAVINLWHDS 655
Score = 161 (61.7 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 64/312 (20%), Positives = 127/312 (40%)
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKN-GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL 305
G+ + + + D +Q ++ N + +D +T + GHK+ + LS +
Sbjct: 356 GYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVAT-MSCSYVLAGHKEVV--LSLDTCVS 412
Query: 306 NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY--SASQDRTIK 363
+ + KD +R+W+ C+ V T H + + + + S S DRT+K
Sbjct: 413 SSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLK 472
Query: 364 VWRASDGVM--------CRT---LEGHAHWVNTLALS-TDYLMRV--EATSTGGFKY-DP 408
VW + DG+ +T + H +N++A++ D L+ E + ++ D
Sbjct: 473 VW-SLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDL 531
Query: 409 ANPEESSKHALAKYQAQCPEGEKLV-SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE 467
+ H + + ++ V + S D T+ +W + L GH +
Sbjct: 532 VHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIW-AISDGSCLKTFEGHTSSVLRAS 590
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527
F DG S D +KLW+ + I T H V+ +A + ++ +G D+ +
Sbjct: 591 FITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVIN 650
Query: 528 VWNMKTKKIEQD 539
+W+ T ++D
Sbjct: 651 LWHDSTASDKED 662
Score = 158 (60.7 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 41/174 (23%), Positives = 79/174 (45%)
Query: 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD 260
S++ G ++ + ++ SP+ + L S +R WD+ T + +GH+ V+ +A
Sbjct: 54 STIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHAS 113
Query: 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
L + + + WD G RGHK ++++ FH + S D
Sbjct: 114 GGLLATAGADRKVLVWDVDGGF-CTHYFRGHKGVVSSIL---FHPDSNKNILISGSDDAT 169
Query: 321 IRIWDVILS----QCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASD 369
+R+WD+ +C+ ++ H +VT I GL ++SA +D+ + +W D
Sbjct: 170 VRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHD 223
Score = 146 (56.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 63/252 (25%), Positives = 103/252 (40%)
Query: 216 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA 275
S +G +A GD + D T + EG + +A SPD K L S + I
Sbjct: 28 SSDGSFIACACGDV-INIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRV 86
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
WD T K I + +GH+ + ++ H + A++G D + +WDV C
Sbjct: 87 WDLETLKCI-RSWKGHEGPVMGMAC---HASGGL--LATAGADRKVLVWDVDGGFCTHYF 140
Query: 336 TSHTRSVTCIRW---GGSGLIYSASQDRTIKVW----RASDGVMCRTLEGHAHWVNTLAL 388
H V+ I + ++ S S D T++VW + ++ +E H V ++AL
Sbjct: 141 RGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIAL 200
Query: 389 STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEK 448
S D L A + + S K +A Y+ E VS F F+ + +
Sbjct: 201 SEDGLTLFSAGRDKVVNLWDLH-DYSCKATVATYEVL--EAVTTVSSGTPFASFVASLD- 256
Query: 449 EKKSLARMTGHQ 460
+KKS + + Q
Sbjct: 257 QKKSKKKESDSQ 268
Score = 135 (52.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 32/116 (27%), Positives = 54/116 (46%)
Query: 458 GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLL 517
G + + SPD +++ SA + I++WD K I + +GH V +A + LL
Sbjct: 58 GESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLL 117
Query: 518 VSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK--VASGGKDKVLRLW 571
+ AD + VW++ GH V ++ + PD K + SG D +R+W
Sbjct: 118 ATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVW 173
Score = 95 (38.5 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 28/84 (33%), Positives = 38/84 (45%)
Query: 102 CTSSMPGHAEAVISVKFSP--NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNE 159
CT GH V S+ F P N L SGS D TVR WD+ + KC +
Sbjct: 136 CTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAV 195
Query: 160 TEITKTLADVLPLDTLNTEEVVDI 183
T I + D L L + ++VV++
Sbjct: 196 TSIALS-EDGLTLFSAGRDKVVNL 218
Score = 74 (31.1 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 19/63 (30%), Positives = 28/63 (44%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
+C + M H AV S+ S +G +L S D V WD+ + C+ T + V E
Sbjct: 183 KCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHD----YSCKATVATYEVLEA 238
Query: 161 EIT 163
T
Sbjct: 239 VTT 241
Score = 57 (25.1 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
S++ G ++ + ++ SP+ + L S +R WD+ T
Sbjct: 54 STIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLET 91
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 317 (116.6 bits), Expect = 8.1e-28, P = 8.1e-28
Identities = 86/303 (28%), Positives = 148/303 (48%)
Query: 200 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-----QTPLFKCEGHKHWVLC 254
+ ++ H AV SVKFS +GR LAS S D T+R + + T P+ + GH++ +
Sbjct: 17 SQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISD 76
Query: 255 IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
+A+S D++ +VS + + WD TG I + + GH + +++ P Q S
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDVETGSLI-KTLIGHTNYAFCVNFNP-----QSNMIVS 130
Query: 315 SGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMC 373
D +RIWDV +C++VL +H+ VT + + G LI S+S D ++W + G
Sbjct: 131 GSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCV 190
Query: 374 RTL-EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK----HALAKY----QA 424
+TL + V+ + S + + T + + + K H A+Y
Sbjct: 191 KTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAF 250
Query: 425 QCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI 484
G+++VSGS+D + +W KK L ++ GH + + V P +IAS S DK++
Sbjct: 251 SVTNGKRIVSGSEDNCVHMWELNS-KKLLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309
Query: 485 KLW 487
++W
Sbjct: 310 RIW 312
Score = 276 (102.2 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 79/281 (28%), Positives = 134/281 (47%)
Query: 310 RRFASSGKDGAIRIWDVI-----LSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIK 363
R AS+ D IR + + +++ V+ T H ++ + + I SAS D+T+K
Sbjct: 37 RLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLK 96
Query: 364 VWRASDGVMCRTLEGHAHW---VN-------TLALSTDYLMRVEATSTGGFKYDPANPEE 413
+W G + +TL GH ++ VN ++ S D +R+ +TG K P
Sbjct: 97 LWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTG--KCLKVLPAH 154
Query: 414 SSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR 473
S + +G +VS S D +W+ + ++ V FSP+G+
Sbjct: 155 SDPVTAVDFNR---DGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGK 211
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV--AWS-SDSRLLVSGSADSTLKVWN 530
I + D +++LW+ KF+ T GHV A Y + A+S ++ + +VSGS D+ + +W
Sbjct: 212 FILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE 271
Query: 531 MKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ +KK+ Q L GH + V V P +ASG DK +R+W
Sbjct: 272 LNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 268 (99.4 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 84/306 (27%), Positives = 137/306 (44%)
Query: 248 HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST-GKQIGQPMR---GHKQWITALSWEPF 303
H V + +S D + L S + I + +T I +P++ GH+ I+ +++
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF--- 79
Query: 304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDRTI 362
+ R S+ D +++WDV ++ L HT C+ + S +I S S D T+
Sbjct: 80 --SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETV 137
Query: 363 KVWRASDGVMCRTLEGHAHWVN--------TLALSTDY--LMRVEATSTGG-FK--YDPA 409
++W + G + L H+ V +L +S+ Y L R+ + TG K D
Sbjct: 138 RIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDE 197
Query: 410 NPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE-- 467
NP S ++ P G+ ++ G+ D TL LWN K L TGH C+
Sbjct: 198 NPPVS----FVRFS---PNGKFILVGTLDNTLRLWNISSAK-FLKTYTGHVNAQYCISSA 249
Query: 468 FS-PDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTL 526
FS +G+ I S S D + +W+ K + L GH + V VA L+ SGS D T+
Sbjct: 250 FSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309
Query: 527 KVWNMK 532
++W K
Sbjct: 310 RIWTQK 315
Score = 263 (97.6 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 69/255 (27%), Positives = 126/255 (49%)
Query: 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRAS---DGVM--CRTLEGHAHWVNTL 386
+ LTSH R+V+ +++ G L+ SAS D+TI+ + + D + + GH + ++ +
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 387 ALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ-AQC----PEGEKLVSGSDDFTL 441
A S+D V A+ K K + A C P+ +VSGS D T+
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETV 137
Query: 442 FLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH 501
+W+ K L + H + V+F+ DG +I S+S+D ++WD G + TL
Sbjct: 138 RIWDVTTGK-CLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDD 196
Query: 502 VQA-VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA---PDGE 557
V V +S + + ++ G+ D+TL++WN+ + K + GH + Y + A +G+
Sbjct: 197 ENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGK 256
Query: 558 KVASGGKDKVLRLWQ 572
++ SG +D + +W+
Sbjct: 257 RIVSGSEDNCVHMWE 271
Score = 261 (96.9 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 64/185 (34%), Positives = 93/185 (50%)
Query: 394 MRVEATSTGGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
M E +T F Y + S A++ + +G L S S D T+ +
Sbjct: 1 MAEEIPATASFTPYVHSQTLTSHNRAVSSVKFSS-DGRLLASASADKTIRTYTINTINDP 59
Query: 453 LAR----MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV 508
+A TGH+ I+ V FS D R I SAS DK++KLWD G I TL GH + V
Sbjct: 60 IAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCV 119
Query: 509 AWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
++ S ++VSGS D T+++W++ T K + LP H D V AVD+ DG + S D +
Sbjct: 120 NFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLC 179
Query: 569 RLWQN 573
R+W +
Sbjct: 180 RIWDS 184
Score = 260 (96.6 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 75/268 (27%), Positives = 119/268 (44%)
Query: 195 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLC 254
P+ GH + V FS + R + S S D T++ WDV T + + GH ++ C
Sbjct: 59 PIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFC 118
Query: 255 IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
+ ++P S +VSG + + WD +TGK + + + H +TA+ + N S
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIWDVTTGKCL-KVLPAHSDPVTAVDF-----NRDGSLIVS 172
Query: 315 SGKDGAIRIWDVILSQCVRVLTSHTRS-VTCIRWGGSG-LIYSASQDRTIKVWRASDGVM 372
S DG RIWD CV+ L V+ +R+ +G I + D T+++W S
Sbjct: 173 SSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKF 232
Query: 373 CRTLEGH--AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ----- 425
+T GH A + + A S R+ + S + E +SK L K +
Sbjct: 233 LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVH---MWELNSKKLLQKLEGHTETVM 289
Query: 426 ---CPEGEKLV-SGSDDFTLFLWNPEKE 449
C E L+ SGS D T+ +W +KE
Sbjct: 290 NVACHPTENLIASGSLDKTVRIWTQKKE 317
Score = 241 (89.9 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 76/293 (25%), Positives = 132/293 (45%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-QTPLFKC--EGTPYLFYVNE 159
+ ++ H AV SVKFS +GR LAS S D T+R + + T P+ + E T + +++
Sbjct: 17 SQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISD 76
Query: 160 TEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNG 219
+ ++ T ++ D+ + ++ + ++ GH V F+P
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDV--ETGSLIK---------TLIGHTNYAFCVNFNPQS 125
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ SGS D TVR WDVTT L H V + ++ D +VS +G+ WDS
Sbjct: 126 NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSG 185
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSH 338
TG + + ++ + + P N +F G D +R+W++ ++ ++ T H
Sbjct: 186 TGHCVKTLIDDENPPVSFVRFSP---NG---KFILVGTLDNTLRLWNISSAKFLKTYTGH 239
Query: 339 TRSVTCIRWGGS---GL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLA 387
+ CI S G I S S+D + +W + + + LEGH V +A
Sbjct: 240 VNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVA 292
Score = 220 (82.5 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 66/213 (30%), Positives = 102/213 (47%)
Query: 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-Y------DP-ANP-EESSKHALAK 421
V +TL H V+++ S+D + A++ + Y DP A P +E + H
Sbjct: 15 VHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGI 74
Query: 422 YQ-AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR-MTGHQQLINCVEFSPDGRIIASAS 479
A + +VS SDD TL LW + E SL + + GH CV F+P +I S S
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLW--DVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGS 132
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD 539
FD+++++WD GK + L H V V ++ D L+VS S D ++W+ T +
Sbjct: 133 FDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKT 192
Query: 540 L-PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
L V V ++P+G+ + G D LRLW
Sbjct: 193 LIDDENPPVSFVRFSPNGKFILVGTLDNTLRLW 225
Score = 210 (79.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 66/271 (24%), Positives = 116/271 (42%)
Query: 98 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFY 156
P+ GH + V FS + R + S S D T++ WDV T + + G T Y F
Sbjct: 59 PIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFC 118
Query: 157 VNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFS 216
VN + + D T + D+ K C +P H++ V +V F+
Sbjct: 119 VNFNPQSNMIVSG-SFD--ETVRIWDVTTGK-----------CLKVLPAHSDPVTAVDFN 164
Query: 217 PNGRSLASGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA 275
+G + S S D R WD T + V + +SP+ K ++ G + +
Sbjct: 165 RDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRL 224
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
W+ S+ K + + GH +S F + + +R S +D + +W++ + ++ L
Sbjct: 225 WNISSAKFL-KTYTGHVNAQYCIS-SAFSVTNG-KRIVSGSEDNCVHMWELNSKKLLQKL 281
Query: 336 TSHTRSVTCIRWGGS-GLIYSASQDRTIKVW 365
HT +V + + LI S S D+T+++W
Sbjct: 282 EGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 317 (116.6 bits), Expect = 8.1e-28, P = 8.1e-28
Identities = 85/287 (29%), Positives = 141/287 (49%)
Query: 248 HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNH 307
H V C A+SPD + L++ +G ++ W + +G+ + + + GH+ + + + P
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWR-LAGHRGPVKSCCFSP----- 78
Query: 308 QCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWR 366
R ASS D +IR+WDV S+C+ VL H RSV + + S + S D+ VW
Sbjct: 79 DGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWE 138
Query: 367 ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-----YD-PANPEESSKHALA 420
G L GH + S+D+ ++ +TG + +D A+ S H L
Sbjct: 139 VQSGRRVHLLVGHCDSIQ----SSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLE 194
Query: 421 KYQAQ----CPEGEKLV-SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII 475
+ C L+ SGS D T+ +W P L ++ GH +N + FSPD +
Sbjct: 195 GHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPL-QLKGHTIWVNSLAFSPDELKL 253
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
ASA + +++K+WD GK + TL+G + + ++ D +LLVSG+A
Sbjct: 254 ASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSGAA 300
Score = 293 (108.2 bits), Expect = 3.5e-25, P = 3.5e-25
Identities = 82/243 (33%), Positives = 123/243 (50%)
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
+ GH V S FSP+GR +AS S D ++R WDV L +GH+ V +++SPDSK
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSK 123
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
QL SG + W+ +G+++ + GH I + + P A+ D +
Sbjct: 124 QLASGGWDKRAIVWEVQSGRRV-HLLVGHCDSIQSSDFSP-----TSDSLATGSWDSTVH 177
Query: 323 IWDVILSQCV---RVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
IWD+ S V L HT +++C+ + SGL+ S S D+TI VW+ + + L+GH
Sbjct: 178 IWDLRASTPVVSYHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGH 237
Query: 380 AHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE--ESSKHALAKYQAQC---PEGEKLV 433
WVN+LA S D L A + K +D + E+ K L A C P+G+ LV
Sbjct: 238 TIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHA-CIFTPDGKLLV 296
Query: 434 SGS 436
SG+
Sbjct: 297 SGA 299
Score = 268 (99.4 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 55/155 (35%), Positives = 88/155 (56%)
Query: 417 HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIA 476
H A P+G L++ SDD +++W K + L R+ GH+ + FSPDGR+IA
Sbjct: 26 HGEVNCSAFSPDGRTLLTASDDGCVYVWGT-KSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 477 SASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI 536
S+S D SI+LWD K + L+GH ++V V++S DS+ L SG D VW +++ +
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRR 144
Query: 537 EQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
L GH D + + D++P + +A+G D + +W
Sbjct: 145 VHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIW 179
Score = 236 (88.1 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 74/265 (27%), Positives = 121/265 (45%)
Query: 310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRAS 368
R ++ DG + +W + + L H V + G LI S+S D +I++W +
Sbjct: 39 RTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVA 98
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE-ESSK--HALAKY--- 422
L+GH V T++ S D + ++GG+ E +S + H L +
Sbjct: 99 RSKCLHVLKGHQRSVETVSFSPDS----KQLASGGWDKRAIVWEVQSGRRVHLLVGHCDS 154
Query: 423 -QAQ--CPEGEKLVSGSDDFTLFLWNPEKEKK--SLARMTGHQQLINCVEFSPDGRIIAS 477
Q+ P + L +GS D T+ +W+ S + GH I+C+ +S G ++AS
Sbjct: 155 IQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLAS 213
Query: 478 ASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE 537
S+DK+I +W L+GH V +A+S D L S T+KVW+ T K
Sbjct: 214 GSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCL 273
Query: 538 QDLPGHGDEVYAVDWAPDGEKVASG 562
+ L G D +A + PDG+ + SG
Sbjct: 274 ETLKGMLDVAHACIFTPDGKLLVSG 298
Score = 216 (81.1 bits), Expect = 8.0e-16, P = 8.0e-16
Identities = 62/204 (30%), Positives = 98/204 (48%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
+ GH V S FSP+GR +AS S D ++R WDV L +G + E
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKG-----HQRSVETVSF 118
Query: 166 LADVLPLDTLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
D ++++ + K+A V++V+ R + GH +++ S FSP SLA+
Sbjct: 119 SPD--------SKQLASGGWDKRAIVWEVQSGRR-VHLLVGHCDSIQSSDFSPTSDSLAT 169
Query: 225 GSGDTTVRFWDVTTQTPLFK---CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
GS D+TV WD+ TP+ EGH + C+ +S S L SG + I W +T
Sbjct: 170 GSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSA-SGLLASGSWDKTICVWKPTTN 228
Query: 282 KQIGQPMRGHKQWITALSWEPFHL 305
+ ++GH W+ +L++ P L
Sbjct: 229 N-LPLQLKGHTIWVNSLAFSPDEL 251
Score = 211 (79.3 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 41/114 (35%), Positives = 65/114 (57%)
Query: 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV 518
H +NC FSPDGR + +AS D + +W + G+ + L GH V +S D RL+
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 519 SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
S S+D ++++W++ K L GH V V ++PD +++ASGG DK +W+
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWE 138
Score = 208 (78.3 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 46/149 (30%), Positives = 82/149 (55%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+G + S S D ++ LW+ + K L + GHQ+ + V FSPD + +AS +DK +
Sbjct: 78 PDGRLIASSSSDHSIRLWDVARSK-CLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIV 136
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK--TKKIE-QDLPGH 543
W+ + G+ + L GH ++ +S S L +GS DST+ +W+++ T + +L GH
Sbjct: 137 WEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGH 196
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
+ + ++ G +ASG DK + +W+
Sbjct: 197 TGNISCLCYSASG-LLASGSWDKTICVWK 224
Score = 186 (70.5 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 72/273 (26%), Positives = 108/273 (39%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H E S FSP+GR+L + S D V W + L++ G + +
Sbjct: 26 HGEVNCSA-FSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAG-------HRGPVKSCCFS 77
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
P L D + V + ++C + GH +V +V FSP+ + LASG D
Sbjct: 78 --PDGRLIASSSSDHSIRLWDVAR----SKCLHVLKGHQRSVETVSFSPDSKQLASGGWD 131
Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD--SSTGKQIGQ 286
W+V + + GH + +SP S L +G + +H WD +ST
Sbjct: 132 KRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYH 191
Query: 287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH I+ L + L AS D I +W + L HT V +
Sbjct: 192 NLEGHTGNISCLCYSASGL------LASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLA 245
Query: 347 WGGSGL-IYSASQDRTIKVWRASDGVMCRTLEG 378
+ L + SA RT+KVW G TL+G
Sbjct: 246 FSPDELKLASAGYSRTVKVWDCLTGKCLETLKG 278
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 54/193 (27%), Positives = 92/193 (47%)
Query: 100 TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNE 159
++C + GH +V +V FSP+ + LASG D W+V + + G + +
Sbjct: 100 SKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVG--HCDSIQS 157
Query: 160 TEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTS--SMPGHAEAVISVKFSP 217
++ + T D+L T V+ ++ +R T S ++ GH + + +S
Sbjct: 158 SDFSPTS------DSLATGSWDSTVH----IWDLRASTPVVSYHNLEGHTGNISCLCYSA 207
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+G LASGS D T+ W TT + +GH WV +A+SPD +L S + + WD
Sbjct: 208 SGL-LASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWD 266
Query: 278 SSTGKQIGQPMRG 290
TGK + + ++G
Sbjct: 267 CLTGKCL-ETLKG 278
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 330 (121.2 bits), Expect = 8.9e-28, P = 8.9e-28
Identities = 89/284 (31%), Positives = 140/284 (49%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH A+ SV FSPNG+ LA+GS DT + W + Q F+ YV ++ T
Sbjct: 16 GHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFR--------YVGHKDVI-TSV 66
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS-MPGHAEAVISVKFSPNGRSLASGS 226
PL L D + + P R SS H V SV FS +G+ LAS S
Sbjct: 67 QFSPLGNLLASASRD-----RTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASAS 121
Query: 227 GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ 286
D +++ W++ Q L+ H HWV C +SPD + +VS ++ I WD+ T KQ
Sbjct: 122 EDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT-TNKQC-- 178
Query: 287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ ++ ++ F+ N C AS+G D ++IWD+ +++ ++ H+ V C+
Sbjct: 179 -VNNFSDFVGFANFVAFNPNGTC--IASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVS 235
Query: 347 WGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
+ SG + +AS D T+K+ +G + TL+GH V T++ S
Sbjct: 236 FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 279
Score = 301 (111.0 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 82/290 (28%), Positives = 133/290 (45%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL 305
+GHK + + +SP+ KQL +G + + W + + + GHK IT++ + P
Sbjct: 15 KGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYV-GHKDVITSVQFSPLG- 72
Query: 306 NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364
AS+ +D IR+W +HT V + + G + SAS+D++IKV
Sbjct: 73 ----NLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKV 128
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHA----L 419
W +L H HWV S D + V + K +D N + + +
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGF 188
Query: 420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + A P G + S D T+ +W+ + K L H +NCV F P G + +AS
Sbjct: 189 ANFVAFNPNGTCIASAGSDHTVKIWDI-RVNKLLQHYQVHSGGVNCVSFHPSGNYLITAS 247
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
D ++K+ D G+ I TL+GH V+ V++S L SG AD+ + +W
Sbjct: 248 SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 269 (99.8 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 75/291 (25%), Positives = 135/291 (46%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
+GHK IT++ + P ++ A+ D + +W + H +T +++
Sbjct: 15 KGHKAAITSVDFSP-----NGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFS 69
Query: 349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
G L+ SAS+DRTI++W + H V ++ S D A+ K
Sbjct: 70 PLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVW 129
Query: 408 PANPEESSKHALAKYQ--AQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
+ ++L ++ +C P+G +VS S+D T+ +W+ K+ + +
Sbjct: 130 NMY-RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN-KQCVNNFSDFVG 187
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
N V F+P+G IASA D ++K+WD R+ K + + H V V++ L++ S
Sbjct: 188 FANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITAS 247
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
+D TLK+ ++ ++ L GH V+ V ++ GE SGG D + LW+
Sbjct: 248 SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWR 298
Score = 149 (57.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 49/189 (25%), Positives = 81/189 (42%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
+S H V SV FS +G+ LAS S D +++ W++ Q L+ + +V +
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYR--HTHWVRCAKF 152
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL 222
+ ++ T ++ D KQ V S G A V F+PNG +
Sbjct: 153 SPDGRLIVSCSEDKTIKIWDTT-NKQCVNNF-------SDFVGFANFVA---FNPNGTCI 201
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
AS D TV+ WD+ L + H V C+++ P L++ +G + D G+
Sbjct: 202 ASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGR 261
Query: 283 QIGQPMRGH 291
I ++GH
Sbjct: 262 LI-YTLQGH 269
Score = 122 (48.0 bits), Expect = 0.00033, P = 0.00033
Identities = 40/172 (23%), Positives = 72/172 (41%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S+ H V KFSP+GR + S S D T++ WD T + +C + +V
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK----QCVNN-FSDFVGFANFVA 193
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
+ + + ++ V I + +R V + H+ V V F P+G L +
Sbjct: 194 FNPNGTCIASAGSDHTVKI-------WDIR-VNKLLQHYQVHSGGVNCVSFHPSGNYLIT 245
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
S D T++ D+ ++ +GH V +++S + SG + + W
Sbjct: 246 ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 315 (115.9 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 80/320 (25%), Positives = 155/320 (48%)
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
++G + WD+++G+++ + GH+ + A+++ N + A+ D ++W
Sbjct: 108 ITGSYDRTCKVWDTASGEEL-HTLEGHRNVVYAIAFN----NPYGDKIATGSFDKTCKLW 162
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
+C HT + C+ + S ++ + S D T K+W G TL GH +
Sbjct: 163 SAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEI 222
Query: 384 NTLALSTDYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEG------EKLVS 434
+L+ T + TG F + + S+ H L + A+ +++
Sbjct: 223 ISLSFDTSG----DRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILT 278
Query: 435 GSDDFTLFLWNPEKEKKSLARMTGHQQLI--NCVEFSPDGRIIASASFDKSIKLWDGRIG 492
GS D T LW+ K +A +TGH I +C +++ G++IA+AS D + ++++
Sbjct: 279 GSMDKTCMLWDATSGK-CVATLTGHDDEILDSCFDYT--GKLIATASADGTARVYNATTR 335
Query: 493 KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDW 552
K IT L GH + ++++ L++GS+D T ++W+++T + Q L GH DE+++ +
Sbjct: 336 KCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAF 395
Query: 553 APDGEKVASGGKDKVLRLWQ 572
G V +G KD R+W+
Sbjct: 396 NYKGNIVITGSKDNSCRIWR 415
Score = 287 (106.1 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 75/275 (27%), Positives = 126/275 (45%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG--SGLIYSASQDRTI 362
LN F + D ++WD + + L H V I + I + S D+T
Sbjct: 100 LNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTC 159
Query: 363 KVWRASDGVMCRTLEGHAHWVNTLALSTDY-LMRVEATSTGGFKYDPANPEES---SKHA 418
K+W A G T GH + L+ + ++ + T +D + EE + H
Sbjct: 160 KLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGH- 218
Query: 419 LAKYQAQC--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIA 476
LA+ + G+++++GS D T+ +W+ +K + + GH I+ FS D +I
Sbjct: 219 LAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRK-VHTLIGHCAEISSALFSWDCSLIL 277
Query: 477 SASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI 536
+ S DK+ LWD GK + TL GH + + +L+ + SAD T +V+N T+K
Sbjct: 278 TGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKC 337
Query: 537 EQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
L GH E+ + + P G ++ +G DK R+W
Sbjct: 338 ITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIW 372
Score = 237 (88.5 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 63/285 (22%), Positives = 122/285 (42%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H + +V + G +GS D T + WD + L EG + Y
Sbjct: 91 HILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYA----------- 139
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
+ + +++ + K +C + GH ++ + F+P +A+GS D
Sbjct: 140 -IAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMD 198
Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
TT + WD+ + + GH ++ +++ ++++G + + WD+STG+++ +
Sbjct: 199 TTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKV-HTL 257
Query: 289 RGHKQWITA--LSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV--TC 344
GH I++ SW+ C + D +WD +CV LT H + +C
Sbjct: 258 IGHCAEISSALFSWD-------CSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSC 310
Query: 345 IRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
+ G LI +AS D T +V+ A+ LEGH ++ ++ +
Sbjct: 311 FDYTGK-LIATASADGTARVYNATTRKCITKLEGHEGEISKISFN 354
Score = 165 (63.1 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 466 VEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD-SRLLVSGSADS 524
V + G + S+D++ K+WD G+ + TL GH VY +A+++ + +GS D
Sbjct: 98 VALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDK 157
Query: 525 TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
T K+W+ +T K GH E+ + + P VA+G D +LW
Sbjct: 158 TCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLW 204
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 34/127 (26%), Positives = 67/127 (52%)
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW 257
+C +++ GH + ++ F G+ +A+ S D T R ++ TT+ + K EGH+ + I++
Sbjct: 294 KCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISF 353
Query: 258 SPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK 317
+P +L++G + WD TG+ + Q + GH I + ++ N++ + K
Sbjct: 354 NPQGNRLLTGSSDKTARIWDVQTGQCL-QVLEGHTDEIFSCAF-----NYKGNIVITGSK 407
Query: 318 DGAIRIW 324
D + RIW
Sbjct: 408 DNSCRIW 414
Score = 154 (59.3 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 47/202 (23%), Positives = 88/202 (43%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
+C + GH ++ + F+P +A+GS DTT + WD+ + + G +L
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTG--HL-----A 220
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
EI L DT + + ++ + V R ++ GH + S FS +
Sbjct: 221 EIIS-----LSFDT-SGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCS 274
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ +GS D T WD T+ + GH +L + K + + +G ++++T
Sbjct: 275 LILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATT 334
Query: 281 GKQIGQPMRGHKQWITALSWEP 302
K I + + GH+ I+ +S+ P
Sbjct: 335 RKCITK-LEGHEGEISKISFNP 355
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA-PDG 556
LR H+ + VA + ++GS D T KVW+ + + L GH + VYA+ + P G
Sbjct: 88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 557 EKVASGGKDKVLRLW 571
+K+A+G DK +LW
Sbjct: 148 DKIATGSFDKTCKLW 162
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 315 (115.9 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 80/331 (24%), Positives = 160/331 (48%)
Query: 255 IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
+A + ++G + WD+++G+++ + GH+ + A+++ N + A+
Sbjct: 98 VALNKSGSCFITGSYDRTCKLWDTASGEEL-HTLEGHRNVVYAIAFN----NPYGDKIAT 152
Query: 315 SGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDRTIKVWRASDGVMC 373
D ++W V +C HT + C+ + S L+ + S D T K+W G
Sbjct: 153 GSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEV 212
Query: 374 RTLEGHAHWVNTLALST----------DYLMRVEATSTGGFKYDPANPEESSKHALAKYQ 423
TL GH+ + +L+ +T D+ + V TG Y ++ + A +
Sbjct: 213 FTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIG--HCAEISSAVFN 270
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI--NCVEFSPDGRIIASASFD 481
C +++GS D T LW+ K +A +TGH I +C +++ G++IA+AS D
Sbjct: 271 WDC---SLILTGSMDKTCKLWDAVNGK-CVATLTGHDDEILDSCFDYT--GKLIATASAD 324
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP 541
+ +++ + +T L GH + ++++ L++GS+D T ++W+ +T + Q L
Sbjct: 325 GTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLE 384
Query: 542 GHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
GH DE+++ + G+ + +G KD R+W+
Sbjct: 385 GHTDEIFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 245 (91.3 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 60/283 (21%), Positives = 125/283 (44%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H + +V + +G +GS D T + WD + L EG + Y
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYA----------- 139
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
+ + +++ + K +C + GH ++ + F+P +A+GS D
Sbjct: 140 -IAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMD 198
Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
TT + WD+ + +F GH ++ ++++ ++++G + + W++ TG+++ +
Sbjct: 199 TTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKV-YTL 257
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV--TCIR 346
GH I++ + N C + D ++WD + +CV LT H + +C
Sbjct: 258 IGHCAEISSAVF-----NWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFD 312
Query: 347 WGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
+ G LI +AS D T +++ A+ LEGH ++ ++ +
Sbjct: 313 YTGK-LIATASADGTARIFSAATRECVTKLEGHEGEISKISFN 354
Score = 156 (60.0 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 33/127 (25%), Positives = 65/127 (51%)
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW 257
+C +++ GH + ++ F G+ +A+ S D T R + T+ + K EGH+ + I++
Sbjct: 294 KCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISF 353
Query: 258 SPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK 317
+P +L++G + WD+ TG+ + Q + GH I + ++ N++ + K
Sbjct: 354 NPQGNRLLTGSSDKTARIWDAQTGQCL-QVLEGHTDEIFSCAF-----NYKGDIIITGSK 407
Query: 318 DGAIRIW 324
D RIW
Sbjct: 408 DNTCRIW 414
Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 42/202 (20%), Positives = 84/202 (41%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
+C + GH ++ + F+P +A+GS DTT + WD+ + +F G +
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTG-------HSA 220
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
EI L +T + V++ R ++ GH + S F+ +
Sbjct: 221 EIIS-----LSFNTSGNRIITGSFDHTVTVWEA-DTGRKVYTLIGHCAEISSAVFNWDCS 274
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ +GS D T + WD + GH +L + K + + +G + ++T
Sbjct: 275 LILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAAT 334
Query: 281 GKQIGQPMRGHKQWITALSWEP 302
+ + + + GH+ I+ +S+ P
Sbjct: 335 RECVTK-LEGHEGEISKISFNP 355
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA-PDG 556
LR H+ + VA + ++GS D T K+W+ + + L GH + VYA+ + P G
Sbjct: 88 LRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 557 EKVASGGKDKVLRLW 571
+K+A+G DK +LW
Sbjct: 148 DKIATGSFDKTCKLW 162
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 314 (115.6 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 88/311 (28%), Positives = 152/311 (48%)
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRF-ASSGKDGAIRIWDVILSQCVRVLTSHT 339
G ++ + GH + I+A+ + P C +F +S D ++IW++ C R LT H
Sbjct: 68 GYKLISTIEGHTKSISAVKFSP------CGKFLGTSSADKTVKIWNMSDLSCERTLTGHK 121
Query: 340 RSVTCIRWGG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV--------NTLALST 390
V W S I +AS D+T+K++ M +TL+GH ++V ++L +S
Sbjct: 122 LGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSG 181
Query: 391 --DYLMRVEATSTGG-FKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
D +R+ TG K PA+ + S + + +G + SGS D + +W+
Sbjct: 182 SFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNR------DGSLITSGSYDGLVRIWDTA 235
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ + + V+FSP+G+ I S++ D ++KLWD GK + +GH Y
Sbjct: 236 NGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYC 295
Query: 508 VAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG- 563
+ + + + ++SGS D + VWN++TK++ Q L GH V A D P +ASG
Sbjct: 296 IFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGAL 355
Query: 564 -KDKVLRLWQN 573
D +R+W++
Sbjct: 356 EPDNTIRIWRS 366
Score = 299 (110.3 bits), Expect = 7.6e-26, P = 7.6e-26
Identities = 81/301 (26%), Positives = 151/301 (50%)
Query: 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD 260
S++ GH +++ +VKFSP G+ L + S D TV+ W+++ + GHK V AWS D
Sbjct: 73 STIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSAD 132
Query: 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
SK +V+ + + ++ T K + + ++GH ++ ++ P Q S D +
Sbjct: 133 SKSIVTASDDKTLKIYEVPTVK-MAKTLKGHTNYVFCCNFNP-----QSSLVVSGSFDES 186
Query: 321 IRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL-EG 378
+RIWDV CV+ L +H+ V+ + + G LI S S D +++W ++G +TL +
Sbjct: 187 VRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDD 246
Query: 379 HAHWVNTLALSTD--YLMRVEATST------G-GFKYDPANPEESSKHAL-AKYQAQCPE 428
V + S + Y++ +T G G E++K+ + A +
Sbjct: 247 ENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVT--G 304
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF--DKSIKL 486
G+ ++SGS+D +++WN + K+ + + GH Q + + P +IAS + D +I++
Sbjct: 305 GKWIISGSEDCKIYVWNLQT-KEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRI 363
Query: 487 W 487
W
Sbjct: 364 W 364
Score = 252 (93.8 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 71/285 (24%), Positives = 129/285 (45%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
S++ GH +++ +VKFSP G+ L + S D TV+ W+++ CE T + +
Sbjct: 73 STIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSD----LSCERTLTGHKLGVNDFA 128
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
+ AD + T + ++ + I ++V P + ++ GH V F+P +
Sbjct: 129 WS-ADSKSIVTASDDKTLKI-------YEV-PTVKMAKTLKGHTNYVFCCNFNPQSSLVV 179
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
SGS D +VR WDV T + H V ++++ D + SG +G++ WD++ G+
Sbjct: 180 SGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQC 239
Query: 284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT 343
+ + + + + P + SS D +++WD + ++ H +
Sbjct: 240 VKTLVDDENPPVAFVKFSP-----NGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKY 294
Query: 344 CIR-----WGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
CI GG +I S S+D I VW + ++LEGH V
Sbjct: 295 CIFANFSVTGGKWII-SGSEDCKIYVWNLQTKEVVQSLEGHTQAV 338
Score = 233 (87.1 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 55/176 (31%), Positives = 94/176 (53%)
Query: 397 EATSTG-GFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR 455
E+T G G+K + + K+ P G+ L + S D T+ +WN +
Sbjct: 61 ESTIPGAGYKLISTIEGHTKSISAVKFS---PCGKFLGTSSADKTVKIWNMS-DLSCERT 116
Query: 456 MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR 515
+TGH+ +N +S D + I +AS DK++K+++ K TL+GH V+ ++ S
Sbjct: 117 LTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSS 176
Query: 516 LLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
L+VSGS D ++++W+++T + LP H D V AV + DG + SG D ++R+W
Sbjct: 177 LVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIW 232
Score = 192 (72.6 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 66/271 (24%), Positives = 119/271 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNET 160
C ++ GH V +S + +S+ + S D T++ ++V T +G T Y+F N
Sbjct: 113 CERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFN 172
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
P +L D + ++ VR C ++P H++ V +V F+ +G
Sbjct: 173 ----------PQSSLVVSGSFD---ESVRIWDVR-TGMCVKTLPAHSDPVSAVSFNRDGS 218
Query: 221 SLASGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ SGS D VR WD Q + V + +SP+ K ++S + + WD
Sbjct: 219 LITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFG 278
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT 339
GK + Q +GH+ + + F + + S +D I +W++ + V+ L HT
Sbjct: 279 KGKTLKQ-YQGHENNKYCI-FANFSVTGG-KWIISGSEDCKIYVWNLQTKEVVQSLEGHT 335
Query: 340 RSVTCIRWGG-SGLIYSAS--QDRTIKVWRA 367
++V +I S + D TI++WR+
Sbjct: 336 QAVIASDCHPMQNMIASGALEPDNTIRIWRS 366
Score = 173 (66.0 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 70/244 (28%), Positives = 104/244 (42%)
Query: 93 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QT-PLFK 147
+++V P + ++ GH V F+P + SGS D +VR WDV T +T P
Sbjct: 147 IYEV-PTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHS 205
Query: 148 CEGTPYLFYVNETEITKTLADVLPL--DTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPG 205
+ F + + IT D L DT N + V K V P P
Sbjct: 206 DPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCV------KTLVDDENP--------P- 250
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS---PDSK 262
V VKFSPNG+ + S + D T++ WD L + +GH++ CI + K
Sbjct: 251 ----VAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGK 306
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG--KDGA 320
++SG ++ I+ W+ T K++ Q + GH Q + A P AS D
Sbjct: 307 WIISGSEDCKIYVWNLQT-KEVVQSLEGHTQAVIASDCHPMQ-----NMIASGALEPDNT 360
Query: 321 IRIW 324
IRIW
Sbjct: 361 IRIW 364
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 313 (115.2 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 84/344 (24%), Positives = 162/344 (47%)
Query: 242 LFKC-EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSW 300
LFK + H + +A + ++G + WD+++G+++ + GH+ + A+++
Sbjct: 84 LFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNT-LEGHRNVVYAIAF 142
Query: 301 EPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQD 359
N + A+ D ++W V +C HT + C+ + S L+ + S D
Sbjct: 143 N----NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMD 198
Query: 360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL 419
T K+W +G TL GH+ + +L+ +T + TG F + + + +
Sbjct: 199 TTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSG----DRIITGSFDHTVVVWDADTGRKV 254
Query: 420 AKYQAQCPEGEK---------LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI--NCVEF 468
C E +++GS D T LW+ K +A +TGH I +C ++
Sbjct: 255 NILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGK-CVATLTGHDDEILDSCFDY 313
Query: 469 SPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKV 528
+ G++IA+AS D + +++ K I L GH + ++++ L++GS+D T ++
Sbjct: 314 T--GKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARI 371
Query: 529 WNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
W+ +T + Q L GH DE+++ + G V +G KD R+W+
Sbjct: 372 WDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIWR 415
Score = 244 (91.0 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 61/286 (21%), Positives = 125/286 (43%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
+ H + +V + +G +GS D T + WD + L EG + Y
Sbjct: 88 LKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYA-------- 139
Query: 166 LADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG 225
+ + +++ + K +C + GH ++ + F+P +A+G
Sbjct: 140 ----IAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATG 195
Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285
S DTT + WD+ ++ GH ++ ++++ ++++G + + WD+ TG+++
Sbjct: 196 SMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVN 255
Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV--T 343
+ GH I++ S+ N C + D ++WD +CV LT H + +
Sbjct: 256 I-LIGHCAEISSASF-----NWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDS 309
Query: 344 CIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
C + G LI +AS D T +++ A+ LEGH ++ ++ +
Sbjct: 310 CFDYTGK-LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFN 354
Score = 157 (60.3 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 33/127 (25%), Positives = 64/127 (50%)
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW 257
+C +++ GH + ++ F G+ +A+ S D T R + T+ + K EGH+ + I++
Sbjct: 294 KCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISF 353
Query: 258 SPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK 317
+P L++G + WD+ TG+ + Q + GH I + ++ N++ + K
Sbjct: 354 NPQGNHLLTGSSDKTARIWDAQTGQCL-QVLEGHTDEIFSCAF-----NYKGNIVITGSK 407
Query: 318 DGAIRIW 324
D RIW
Sbjct: 408 DNTCRIW 414
Score = 155 (59.6 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 46/207 (22%), Positives = 88/207 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
+C + GH ++ + F+P +A+GS DTT + WD+ ++ G +
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRG-------HSA 220
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
EI L +T + + ++ + V R + + GH + S F+ +
Sbjct: 221 EIIS-----LSFNT-SGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCS 274
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ +GS D T + WD T + GH +L + K + + +G + ++T
Sbjct: 275 LILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAAT 334
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNH 307
K I + + GH+ I+ +S+ P NH
Sbjct: 335 RKCIAK-LEGHEGEISKISFNP-QGNH 359
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 339 (124.4 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 123/466 (26%), Positives = 211/466 (45%)
Query: 100 TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT-PYLFYVN 158
T ++ GH+EAV V FSP+G+ +ASGS ++ WD TT + G+ P Y
Sbjct: 610 TPMIQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQI 669
Query: 159 ETEITKTLADVLPLDTLNTEEVVD---IVYQ-----KQAV---FQVRPVTRCTSSMPGHA 207
+ E K +A LP L D +++ +Q + F + V P
Sbjct: 670 QQEQVKAMA-FLPDSKLIISGYYDGSVMLWDTTTGDRQEIADHFGISKVNYTYLQPPEQG 728
Query: 208 EAVISV-KFSPNGRSLAS-G-SGDTT-VRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ 263
+ FS + + +A+ G S D+T + +D T +GH H +A+S DS+Q
Sbjct: 729 GYGLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQ 788
Query: 264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRI 323
LV+G + + W+++TG + + GH + +++ ++ R+ S G A+++
Sbjct: 789 LVTGSVDCTVRLWNTTTG-DLEKTFVGHTGTVLSVA-----ISSDGRQIVS-GSIEAVKL 841
Query: 324 WDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
WD ++ L S S I + +D I +W A+ G + +TLE H +
Sbjct: 842 WDAATGDLLKTLASGFAGSVAFS-PDSRQIAAGFKDGKIFIWDAA-GTLQKTLERHPGAI 899
Query: 384 NTLALSTDYLMRVEATSTGGFK-YDPA--NPEES---SKHALAKYQAQCPEGEKLVSGSD 437
++A S D V ++ K +D +E+ SKH + P+G+ + SGS
Sbjct: 900 MSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAVGHSKHVTTMVLS--PDGKVIASGSA 957
Query: 438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497
D T+ LW+ +TGH + V FS D R I S S +++K+WD GK +
Sbjct: 958 DKTIKLWDAATGDLQKT-LTGHLDTVEKVVFSLDNRQIVSCS-SEAVKIWDAATGKVQNS 1015
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
+VA S D + + SG + +K+W+M T + + + G+
Sbjct: 1016 FESD-DVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAGY 1060
Score = 319 (117.4 bits), Expect = 4.3e-25, P = 4.3e-25
Identities = 103/388 (26%), Positives = 181/388 (46%)
Query: 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTT----------------QTPLFKCEGHKHW 251
E V ++ F P+ + + SG D +V WD TT T L E +
Sbjct: 672 EQVKAMAFLPDSKLIISGYYDGSVMLWDTTTGDRQEIADHFGISKVNYTYLQPPEQGGYG 731
Query: 252 VLCIAWSPDSKQLVS-GCKNG--VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQ 308
+ A+S D KQ+ + G I +D++TG + + ++GH + +++ +
Sbjct: 732 LHAGAFSADCKQIAAFGWSRDSTCIMLFDTATG-DLQKILKGHSHECSTMAF-----SSD 785
Query: 309 CRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRAS 368
R+ + D +R+W+ + HT +V + G + +K+W A+
Sbjct: 786 SRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIEAVKLWDAA 845
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG-FKYDPANPEESS--KHALAKYQ-A 424
G + +TL + + ++A S D G F +D A + + +H A A
Sbjct: 846 TGDLLKTLA--SGFAGSVAFSPDSRQIAAGFKDGKIFIWDAAGTLQKTLERHPGAIMSIA 903
Query: 425 QCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI 484
P+ ++LV+ S D T+ W + + GH + + + SPDG++IAS S DK+I
Sbjct: 904 FSPDVKQLVTCSTDSTIKRW--DITIGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTI 961
Query: 485 KLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG 544
KLWD G TL GH+ V V +S D+R +VS S+++ +K+W+ T K++
Sbjct: 962 KLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSEA-VKIWDAATGKVQNSF--ES 1018
Query: 545 DEVYA-VDWAPDGEKVASGGKDKVLRLW 571
D+V+ V +PDG+ +ASG + ++LW
Sbjct: 1019 DDVFTIVAVSPDGKHIASGHCNGRIKLW 1046
Score = 308 (113.5 bits), Expect = 7.0e-24, P = 7.0e-24
Identities = 104/386 (26%), Positives = 184/386 (47%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH V+SV S +GR + SGS + V+ WD T L K + +A+SPDS+Q+
Sbjct: 814 GHTGTVLSVAISSDGRQIVSGSIEA-VKLWDAATGD-LLKTLA-SGFAGSVAFSPDSRQI 870
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
+G K+G I WD++ Q + + H I ++++ P ++ + D I+ W
Sbjct: 871 AAGFKDGKIFIWDAAGTLQ--KTLERHPGAIMSIAFSP-----DVKQLVTCSTDSTIKRW 923
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
D+ + V+ H++ VT + G +I S S D+TIK+W A+ G + +TL GH V
Sbjct: 924 DITIGG-VQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTV 982
Query: 384 NTLALSTDYLMRVEATSTGGFKYDPANPE-ESSKHA--LAKYQAQCPEGEKLVSGSDDFT 440
+ S D V +S +D A + ++S + + A P+G+ + SG +
Sbjct: 983 EKVVFSLDNRQIVSCSSEAVKIWDAATGKVQNSFESDDVFTIVAVSPDGKHIASGHCNGR 1042
Query: 441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG 500
+ LW+ L M G++ +F ++ + FD I+L + F T + G
Sbjct: 1043 IKLWDMATGSL-LKTMAGYRS-----KFDS---LVTTEVFD--IQLQEAI---FNTQITG 1088
Query: 501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV------------- 547
V +S D++L++S S D +K+W+ T +++ LP H D +
Sbjct: 1089 LV-------FSPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPN 1141
Query: 548 --YAVDWAPDGEKVASGGKDKVLRLW 571
++V ++ DG+ +A+ DK +R+W
Sbjct: 1142 WIFSVAFSSDGQHIAAASADKTIRVW 1167
Score = 275 (101.9 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 99/373 (26%), Positives = 166/373 (44%)
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
+ GH+ ++ FS + R L +GS D TVR W+ TT GH VL +A S D +
Sbjct: 770 LKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGR 829
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
Q+VSG V WD++TG + G + ++++ P R+ A+ KDG I
Sbjct: 830 QIVSGSIEAV-KLWDAATGDLLKTLASG---FAGSVAFSP-----DSRQIAAGFKDGKIF 880
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
IWD + L H ++ I + + + S D TIK W + G + + GH+
Sbjct: 881 IWDAA-GTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAV-GHSK 938
Query: 382 WVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSK---HA-LAKYQAQCPEGEKLVSGS 436
V T+ LS D + ++ K +D A + H + + ++VS S
Sbjct: 939 HVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCS 998
Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496
+ + +W+ K + + V SPDG+ IAS + IKLWD G +
Sbjct: 999 SE-AVKIWDAATGK--VQNSFESDDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLK 1055
Query: 497 TLRGH--------------VQ---AVYM-----VAWSSDSRLLVSGSADSTLKVWNMKTK 534
T+ G+ +Q A++ + +S D++L++S S D +K+W+ T
Sbjct: 1056 TMAGYRSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTSTDRAIKLWDAATG 1115
Query: 535 KIEQDLPGHGDEV 547
+++ LP H D +
Sbjct: 1116 DLQKRLPCHSDSI 1128
Score = 238 (88.8 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 98/415 (23%), Positives = 179/415 (43%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ-----------TPL---FKCEGT 151
+ GH+ ++ FS + R L +GS D TVR W+ TT T L +G
Sbjct: 770 LKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGR 829
Query: 152 PY---------LFYVNETEITKTLADVLPLDTLNTEEVVDIV--YQKQAVFQVRPVTRCT 200
L+ ++ KTLA + + I ++ +F
Sbjct: 830 QIVSGSIEAVKLWDAATGDLLKTLASGFAGSVAFSPDSRQIAAGFKDGKIFIWDAAGTLQ 889
Query: 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD 260
++ H A++S+ FSP+ + L + S D+T++ WD+T + + GH V + SPD
Sbjct: 890 KTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGG-VQEAVGHSKHVTTMVLSPD 948
Query: 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
K + SG + I WD++TG + + + GH + + F L++ R+ S + A
Sbjct: 949 GKVIASGSADKTIKLWDAATG-DLQKTLTGHLDTVEKVV---FSLDN--RQIVSCSSE-A 1001
Query: 321 IRIWDVILSQCVRVLTSH-TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
++IWD + S ++ + G + R IK+W + G + +T+ G+
Sbjct: 1002 VKIWDAATGKVQNSFESDDVFTIVAVSPDGKHIASGHCNGR-IKLWDMATGSLLKTMAGY 1060
Query: 380 AHWVNTLALSTDYLMRV-EA---TSTGGFKYDPANP---EESSKHALAKYQAQCPEGEKL 432
++L + + +++ EA T G + P S+ A+ + A + +K
Sbjct: 1061 RSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKR 1120
Query: 433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
+ D + + +R +G+ I V FS DG+ IA+AS DK+I++W
Sbjct: 1121 LPCHSDSII--------TDAFSRSSGYPNWIFSVAFSSDGQHIAAASADKTIRVW 1167
Score = 165 (63.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 68/267 (25%), Positives = 118/267 (44%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH++ V ++ SP+G+ +ASGS D T++ WD T GH V + +S D++Q+
Sbjct: 935 GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQI 994
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
VS C + + WD++TGK I A+S + H+ AS +G I++W
Sbjct: 995 VS-CSSEAVKIWDAATGKVQNSFESDDVFTIVAVSPDGKHI-------ASGHCNGRIKLW 1046
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
D+ ++ + + RS L+ + D I++ A L
Sbjct: 1047 DMATGSLLKTMAGY-RSKF------DSLVTTEVFD--IQLQEAIFNTQITGLVFSPDAKL 1097
Query: 385 TLALSTDYLMRVEATSTGGF-KYDPANPEESSKHALAK---YQ------AQCPEGEKLVS 434
L+ STD +++ +TG K P + + A ++ Y A +G+ + +
Sbjct: 1098 ILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNWIFSVAFSSDGQHIAA 1157
Query: 435 GSDDFTLFLWNPEKEKKS---LARMTG 458
S D T+ +W+ EK K+ L R G
Sbjct: 1158 ASADKTIRVWSIEKSLKASKYLGRAVG 1184
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 335 (123.0 bits), Expect = 2.7e-27, P = 2.7e-27
Identities = 131/511 (25%), Positives = 213/511 (41%)
Query: 93 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ--TPLFKCEG 150
++++ P R SM H VI++ P LA+G + V+ WD+ T F+ G
Sbjct: 87 IYEI-PSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHG 145
Query: 151 TPY-LFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEA 209
+ + T LA + ++ + AVF+ GH+
Sbjct: 146 GVISALCFGKHQNTWVLASGADDSRVRLWDLNSS--RSMAVFE------------GHSSV 191
Query: 210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW---SPDSKQLVS 266
+ + F P G L SGS D TV+ W++ ++ + H V I W P+ K L +
Sbjct: 192 IRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVF-HSVEAIGWVNGQPEEKILYT 250
Query: 267 GCKNGVIHAWDSSTGKQIGQPM-RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ +I AWD +G ++ + H + + PF N S D ++ +
Sbjct: 251 AGEGNLILAWDWKSGSRLDPGVDTTHSETNAIIQVVPFSEN----TLLSVHSDLSLLLRK 306
Query: 326 VILSQ---CVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMC-RTLEGHAH 381
+ + ++ L V W G + S I V ++DG LEGH
Sbjct: 307 RVPGEGFITIKKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVI-STDGTQVFGVLEGHTD 365
Query: 382 WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQC------P---EG 429
V TL S D + + N E++ H + A P G
Sbjct: 366 IVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNG 425
Query: 430 EK--LVSGSDDFTLFLWN--PEKEKKSLAR-----MTGHQQLINCVEFSPDGRIIASASF 480
L S S D TL +N + K + + H + +N ++ S DGRIIASAS
Sbjct: 426 YPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQ 485
Query: 481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL 540
DK+IKLWD G+ + LRGH + V+ +++ SR L SGS D T+++WN+ T++ Q L
Sbjct: 486 DKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTL 545
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH + + + G +V S D ++++W
Sbjct: 546 EGHTGAILKLIYISQGTQVVSAAADGLVKVW 576
Score = 274 (101.5 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 119/472 (25%), Positives = 199/472 (42%)
Query: 100 TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-----PLF-KCEGTPY 153
+R + GH+ + + F P G L SGS D TV+ W++ ++ P+F E +
Sbjct: 179 SRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGW 238
Query: 154 LFYVNETEITKTLAD---VLPLDTLNTEEV---VDIVYQK-QAVFQVRPVTRCTSSMPGH 206
+ E +I T + +L D + + VD + + A+ QV P + T + H
Sbjct: 239 VNGQPEEKILYTAGEGNLILAWDWKSGSRLDPGVDTTHSETNAIIQVVPFSENTL-LSVH 297
Query: 207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVS 266
++ + + R G G T++ K G V+ AW D V
Sbjct: 298 SDLSLLL------RKRVPGEGFITIK-----------KLNGSFDEVIDCAWIGDDHLAV- 339
Query: 267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
C N S+ G Q+ + GH + L + A+ KD +R+W++
Sbjct: 340 -CSNTEFIDVISTDGTQVFGVLEGHTDIVLTLD-----SSEDGVWLATGAKDNTVRLWNL 393
Query: 327 ILS----QCVRVLTSHTRSVTCIRWGG---SG---LIYSASQDRTIKVWRA------SD- 369
+ +C+ V T HT SVT + G +G + S+SQDRT+K + SD
Sbjct: 394 NIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDF 453
Query: 370 -GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSK---HALAKYQA 424
T++ H VN + +S D + A+ K +D + E H +
Sbjct: 454 SNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWAC 513
Query: 425 QC-PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
P +L SGS D T+ +WN + ++ + + GH I + + G + SA+ D
Sbjct: 514 SFNPFSRQLASGSGDRTIRIWNVDTQQ-CVQTLEGHTGAILKLIYISQGTQVVSAAADGL 572
Query: 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
+K+W G+ + TL H V+ +A D LLVSG AD+ + VW T++
Sbjct: 573 VKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEE 624
Score = 210 (79.0 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 44/146 (30%), Positives = 80/146 (54%)
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
+G + S S D T+ LW+ + + + GH++ + F+P R +AS S D++I++W
Sbjct: 476 DGRIIASASQDKTIKLWD-SSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIW 534
Query: 488 DGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
+ + + TL GH A+ + + S +VS +AD +KVW++ + + L H D V
Sbjct: 535 NVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRV 594
Query: 548 YAVDWAPDGEKVASGGKDKVLRLWQN 573
+A+ DG + SGG D V+ +W++
Sbjct: 595 WALASRFDGSLLVSGGADAVVSVWKD 620
Score = 194 (73.4 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 83/378 (21%), Positives = 162/378 (42%)
Query: 213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKH-WVLCIAWSPDSKQLVSGCKNG 271
V F N + L + D + T + LF + + +V +A + DSK+L++ ++
Sbjct: 25 VAFDSNEKILVTALTDRIIGTRSETGER-LFSIKKDEDDYVTALAITSDSKKLIAAFRSR 83
Query: 272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC 331
++ ++ +G++I + M+ H+ + ++ +P + A+ G +G +++WD+ +
Sbjct: 84 LLTIYEIPSGRRI-KSMKAHETPVITMTIDPTNT-----LLATGGAEGLVKVWDIAGAYV 137
Query: 332 VRVLTSHTRSVTCIRWG---GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
H ++ + +G + ++ S + D +++W + EGH+ + L
Sbjct: 138 THSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTF 197
Query: 389 ST--DYLM---RVEATSTGGFKYDPAN---PEESSKHALAKYQAQCPEGEKLVSGSDDFT 440
+L+ R + K A P S A+ Q PE + L + +
Sbjct: 198 EPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQ-PEEKILYTAGEGNL 256
Query: 441 LFLWNPEKEKKSLARM-TGHQQ---LINCVEFSPDGRIIASASFDKSIKLWDGRIGK-FI 495
+ W+ + + + T H + +I V FS + + S D S+ L G+ FI
Sbjct: 257 ILAWDWKSGSRLDPGVDTTHSETNAIIQVVPFSEN--TLLSVHSDLSLLLRKRVPGEGFI 314
Query: 496 TT--LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA 553
T L G V AW D L V + + + V + ++ L GH D V +D +
Sbjct: 315 TIKKLNGSFDEVIDCAWIGDDHLAVCSNTEF-IDVISTDGTQVFGVLEGHTDIVLTLDSS 373
Query: 554 PDGEKVASGGKDKVLRLW 571
DG +A+G KD +RLW
Sbjct: 374 EDGVWLATGAKDNTVRLW 391
Score = 193 (73.0 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 81/366 (22%), Positives = 154/366 (42%)
Query: 210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
V ++ + + + L + + +++ + + + H+ V+ + P + L +G
Sbjct: 64 VTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGA 123
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS 329
G++ WD + G + RGH I+AL + H N AS D +R+WD+ S
Sbjct: 124 EGLVKVWDIA-GAYVTHSFRGHGGVISALCFGK-HQNTWV--LASGADDSRVRLWDLNSS 179
Query: 330 QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEG-HA----HWV 383
+ + V H+ + + + +G + S S+D+T++VW RT+ H+ WV
Sbjct: 180 RSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWV 239
Query: 384 N------TLALSTDYLMRVEATSTGGFKYDPA-NPEESSKHALAKYQAQCPEGEK-LVSG 435
N L + + + + G + DP + S +A+ + P E L+S
Sbjct: 240 NGQPEEKILYTAGEGNLILAWDWKSGSRLDPGVDTTHSETNAIIQV---VPFSENTLLSV 296
Query: 436 SDDFTLFLWN--PEKEKKSLARMTGH-QQLINCVEFSPDGRIIASASFDKSIKLWDGRIG 492
D +L L P + ++ ++ G ++I+C D + S + + DG
Sbjct: 297 HSDLSLLLRKRVPGEGFITIKKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVISTDGT-- 354
Query: 493 KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK----KIEQDLPGHGDEVY 548
+ L GH V + S D L +G+ D+T+++WN+ + K GH V
Sbjct: 355 QVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVT 414
Query: 549 AVDWAP 554
AV P
Sbjct: 415 AVALGP 420
Score = 178 (67.7 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 63/235 (26%), Positives = 103/235 (43%)
Query: 99 VTRCTSSMPGHAEAVISVKFSP---NGRS--LASGSGDTTVRFWDVTTQTPLFKCEGTPY 153
V +C GH +V +V P NG LAS S D T++ +++ +Q L K + +
Sbjct: 399 VYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQ--LNKSDFSNR 456
Query: 154 LFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVIS 212
+ I DV + ++ Q + + T + GH V +
Sbjct: 457 AVWT----IKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWA 512
Query: 213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV 272
F+P R LASGSGD T+R W+V TQ + EGH +L + + Q+VS +G+
Sbjct: 513 CSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGL 572
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW-DV 326
+ W S+G+ + + H+ + AL+ F + S G D + +W DV
Sbjct: 573 VKVWSLSSGECVAT-LDNHEDRVWALA-SRFDGS----LLVSGGADAVVSVWKDV 621
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 312 (114.9 bits), Expect = 2.9e-27, P = 2.9e-27
Identities = 89/334 (26%), Positives = 144/334 (43%)
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
+ GH + SVKF P+ + S S D T++ WD + +GH + V I +
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
L S + I WD T + + + GH ++ + + P + SS +D I+
Sbjct: 162 LLASCSADLTIKLWDFQTYDCV-KTLHGHDHNVSCVRFTP-----SGDQLISSSRDKTIK 215
Query: 323 IWDVILSQCVRVLTSH---TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
+W+ C++ L H R +T + GS I S S D+TIK W G T H
Sbjct: 216 VWEAATGYCIKTLVGHEDWVRKIT-VSEDGS-CIASCSNDQTIKTWNIVKGECLATYREH 273
Query: 380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF 439
+H V LA ST ++ + G P + + QC G L +GS D
Sbjct: 274 SHVVECLAFSTANIIDIP----GSLLSTPEGKSKVKQGPGGNLVGQC--GY-LATGSRDK 326
Query: 440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR 499
T+ +W + LA GH + V F P G+ + S DK+I++WD G+ I T+
Sbjct: 327 TIKIWELATGR-CLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTIN 385
Query: 500 -GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
H + + + + + +G D +KVW ++
Sbjct: 386 EAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 249 (92.7 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 71/291 (24%), Positives = 130/291 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH AV + F G LAS S D T++ WD T + GH H V C+ ++P
Sbjct: 143 TLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSG 202
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
QL+S ++ I W+++TG I + + GH+ W+ ++ + C AS D I
Sbjct: 203 DQLISSSRDKTIKVWEAATGYCI-KTLVGHEDWVRKITVSE---DGSC--IASCSNDQTI 256
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSGLI-----YSASQDRTIKVWRASDGVMCRTL 376
+ W+++ +C+ H+ V C+ + + +I ++ + KV + G L
Sbjct: 257 KTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGG----NL 312
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS 436
G ++ T S D +++ +TG + + ++ P G+ L+S
Sbjct: 313 VGQCGYLATG--SRDKTIKIWELATGRCLATYIGHDNWVR--AVRFH---PCGKFLLSVG 365
Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
DD T+ +W+ + + H I+C++F IA+ D IK+W
Sbjct: 366 DDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 239 (89.2 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 47/127 (37%), Positives = 74/127 (58%)
Query: 446 PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
P +K + +TGH+ IN V+F P ++ SAS D +IK+WD G+F TL+GH AV
Sbjct: 94 PRPPEKHI--LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAV 151
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
+ + LL S SAD T+K+W+ +T + L GH V V + P G+++ S +D
Sbjct: 152 QDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRD 211
Query: 566 KVLRLWQ 572
K +++W+
Sbjct: 212 KTIKVWE 218
Score = 220 (82.5 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 71/246 (28%), Positives = 119/246 (48%)
Query: 334 VLTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST-- 390
+LT H + +++ S L+ SAS+D TIKVW G RTL+GH + V +
Sbjct: 101 ILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTG 160
Query: 391 DYLMRVEATST---GGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNP 446
+ L A T F+ YD H ++ + P G++L+S S D T+ +W
Sbjct: 161 NLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFT-PSGDQLISSSRDKTIKVWEA 219
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
+ + GH+ + + S DG IAS S D++IK W+ G+ + T R H V
Sbjct: 220 ATGY-CIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVE 278
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
+A+S+ + + + GS ST + K++Q PG G+ V + +A+G +DK
Sbjct: 279 CLAFSTANIIDIPGSLLSTPE----GKSKVKQG-PG-GNLVGQCGY------LATGSRDK 326
Query: 567 VLRLWQ 572
+++W+
Sbjct: 327 TIKIWE 332
Score = 214 (80.4 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 53/172 (30%), Positives = 82/172 (47%)
Query: 407 DPANPEESSKHALAKYQAQC-------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
+ A P KH L ++ C P +VS S+D T+ +W+ E + + GH
Sbjct: 90 EDALPRPPEKHILTGHR-NCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERT-LKGH 147
Query: 460 QQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVS 519
+ ++F G ++AS S D +IKLWD + + TL GH V V ++ L+S
Sbjct: 148 TNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLIS 207
Query: 520 GSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
S D T+KVW T + L GH D V + + DG +AS D+ ++ W
Sbjct: 208 SSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTW 259
Score = 160 (61.4 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 53/196 (27%), Positives = 83/196 (42%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
+ GH + SVKF P+ + S S D T++ WD ++ F+ + V + + KT
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDF--ESGEFERTLKGHTNAVQDIDFDKT 159
Query: 166 LADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG 225
L D+ K FQ C ++ GH V V+F+P+G L S
Sbjct: 160 -------GNLLASCSADLTI-KLWDFQTYD---CVKTLHGHDHNVSCVRFTPSGDQLISS 208
Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG-VIHAWDSSTGKQI 284
S D T++ W+ T + GH+ WV I S D + S C N I W+ G+ +
Sbjct: 209 SRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIAS-CSNDQTIKTWNIVKGECL 267
Query: 285 GQPMRGHKQWITALSW 300
R H + L++
Sbjct: 268 AT-YREHSHVVECLAF 282
Score = 130 (50.8 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 40/154 (25%), Positives = 66/154 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH AV + F G LAS S D T++ WD T + C T + N + +
Sbjct: 143 TLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQT----YDCVKTLHGHDHNVSCVRF 198
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
T P + ++++ K C ++ GH + V + S +G +AS
Sbjct: 199 T-----P----SGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIAS 249
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
S D T++ W++ L H H V C+A+S
Sbjct: 250 CSNDQTIKTWNIVKGECLATYREHSHVVECLAFS 283
Score = 128 (50.1 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 27/99 (27%), Positives = 53/99 (53%)
Query: 475 IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534
+A+ S DK+IK+W+ G+ + T GH V V + + L+S D T++VW++
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQG 378
Query: 535 KIEQDL-PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
+ + + H + +D+ +A+GG D V+++W+
Sbjct: 379 RCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWK 417
Score = 118 (46.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 41/144 (28%), Positives = 66/144 (45%)
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
+G + S S+D T+ WN K + LA H ++ C+ FS I S +
Sbjct: 243 DGSCIASCSNDQTIKTWNIVKGE-CLATYREHSHVVECLAFSTANIIDIPGSL---LSTP 298
Query: 488 DGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
+G+ K G++ V + L +GS D T+K+W + T + GH + V
Sbjct: 299 EGK-SKVKQGPGGNL--VGQCGY------LATGSRDKTIKIWELATGRCLATYIGHDNWV 349
Query: 548 YAVDWAPDGEKVASGGKDKVLRLW 571
AV + P G+ + S G DK +R+W
Sbjct: 350 RAVRFHPCGKFLLSVGDDKTIRVW 373
Score = 116 (45.9 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EGHKHWVLCI 255
RC ++ GH V +V+F P G+ L S D T+R WD+ Q K E H H++ C+
Sbjct: 337 RCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIA-QGRCIKTINEAHTHFISCL 395
Query: 256 AWSPDSKQLVSGCKNGVIHAW 276
+ + + +G + VI W
Sbjct: 396 DFCLHNPHIATGGVDDVIKVW 416
Score = 87 (35.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
C ++ GH V V+F+P+G L S S D T++ W+ T
Sbjct: 182 CVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAAT 221
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 312 (114.9 bits), Expect = 2.9e-27, P = 2.9e-27
Identities = 83/304 (27%), Positives = 145/304 (47%)
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW 257
R ++ GH A+ VKFS +G LAS S D T+ W T + + + EGH + +AW
Sbjct: 34 RHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAW 93
Query: 258 SPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK 317
S DS S + + WD+ + + + +RGH ++ +++ P S
Sbjct: 94 SSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNP-----PSNLIVSGSF 148
Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
D IRIW+V +CVR++ +H+ ++ + + G LI SAS D + K+W A +G +TL
Sbjct: 149 DETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTL 208
Query: 377 -EGHAHWVN----------TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ 425
+ + V+ L + D +++ +TG K+ ++K
Sbjct: 209 IDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATG--KFLKVYTGHTNKVFCITSAFS 266
Query: 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS--FDKS 483
G+ +VSGS+D ++LW+ + + L R+ GH + V P I+S+ DK+
Sbjct: 267 VTNGKYIVSGSEDNCVYLWDLQA-RNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKT 325
Query: 484 IKLW 487
I++W
Sbjct: 326 IRIW 329
Score = 249 (92.7 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 89/335 (26%), Positives = 154/335 (45%)
Query: 266 SGCKNGVIHAWDSSTGKQ-------IGQPMRGHKQW---ITALSWEPFHLNHQCRRFASS 315
+G NGV +A +STG I +P R K A+S F ++ AS+
Sbjct: 6 NGTSNGVANA--NSTGNAGTSGNVPIYKPYRHLKTLEGHTAAISCVKF--SNDGNLLASA 61
Query: 316 GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDRTIKVWRASDGVMC- 373
D + +W + H+ ++ + W S SAS D T+++W A C
Sbjct: 62 SVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECL 121
Query: 374 RTLEGHAHWV--------NTLALST--DYLMRVEATSTGGFKYDPANPEESSKHALAKYQ 423
+ L GH ++V + L +S D +R+ TG K S + +
Sbjct: 122 KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTG--KCVRMIKAHSMPISSVHFN 179
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ-LINCVEFSPDGRIIASASFDK 482
+G +VS S D + +W+ KE L + + ++ +FSP+G+ I A+ D
Sbjct: 180 R---DGSLIVSASHDGSCKIWDA-KEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDS 235
Query: 483 SIKLWDGRIGKFITTLRGHVQAVYMV--AWS-SDSRLLVSGSADSTLKVWNMKTKKIEQD 539
++KL + GKF+ GH V+ + A+S ++ + +VSGS D+ + +W+++ + I Q
Sbjct: 236 TLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQR 295
Query: 540 LPGHGDEVYAVDWAPDGEKVASGGK--DKVLRLWQ 572
L GH D V +V P +++S G DK +R+W+
Sbjct: 296 LEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIWK 330
Score = 214 (80.4 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 80/306 (26%), Positives = 136/306 (44%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R ++ GH A+ VKFS +G LAS S D T+ W T + + + EG + +
Sbjct: 34 RHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEG-------HSS 86
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
I+ LA D+ T D + ++ R C + GH V V F+P
Sbjct: 87 GISD-LA--WSSDSHYTCSASDDCTLR--IWDARSPYECLKVLRGHTNFVFCVNFNPPSN 141
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ SGS D T+R W+V T + + H + + ++ D +VS +G WD+
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE 201
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR 340
G + + + K A+S+ F N + A+ D +++ + + ++V T HT
Sbjct: 202 GTCL-KTLIDDKS--PAVSFAKFSPNGKFILVATL--DSTLKLSNYATGKFLKVYTGHTN 256
Query: 341 SVTCIRWGGS---G-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
V CI S G I S S+D + +W + + LEGH V +++S + ++
Sbjct: 257 KVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAV--ISVSC-HPVQN 313
Query: 397 EATSTG 402
E +S+G
Sbjct: 314 EISSSG 319
Score = 172 (65.6 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 61/240 (25%), Positives = 103/240 (42%)
Query: 93 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ--TPLFKCEG 150
++ R C + GH V V F+P + SGS D T+R W+V T + K
Sbjct: 111 IWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Query: 151 TPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSM-PGHAEA 209
P ++ + + ++ + ++ D K+ C ++ + A
Sbjct: 171 MP----ISSVHFNRDGSLIVSASHDGSCKIWDA---KEGT--------CLKTLIDDKSPA 215
Query: 210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCI--AWS-PDSKQLVS 266
V KFSPNG+ + + D+T++ + T L GH + V CI A+S + K +VS
Sbjct: 216 VSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVS 275
Query: 267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK--DGAIRIW 324
G ++ ++ WD + I Q + GH + ++S P +SSG D IRIW
Sbjct: 276 GSEDNCVYLWDLQA-RNILQRLEGHTDAVISVSCHPVQ-----NEISSSGNHLDKTIRIW 329
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 330 (121.2 bits), Expect = 3.8e-27, P = 3.8e-27
Identities = 81/254 (31%), Positives = 130/254 (51%)
Query: 329 SQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNT-- 385
S C++ L H +V + + S L+ SAS DRT+K+W G + TLEGH+ V +
Sbjct: 286 SPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVI 345
Query: 386 -------LALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD 438
LA ++D +++ T TG ++ + + + + +Q L S SDD
Sbjct: 346 FSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQL-----LASASDD 400
Query: 439 FTLFLWNPEKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497
T+ +W + SL + GH+ + V FS D +++ASAS D ++K+WD G T
Sbjct: 401 STVKIW--DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHT 458
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGE 557
L GH V V +S DSRLL S S D T+++W+ + + L GH V +V ++ D
Sbjct: 459 LEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSR 518
Query: 558 KVASGGKDKVLRLW 571
+AS D+ +R+W
Sbjct: 519 LLASASNDQTVRIW 532
Score = 321 (118.1 bits), Expect = 4.1e-26, P = 4.1e-26
Identities = 76/260 (29%), Positives = 130/260 (50%)
Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI 345
Q + GH+ + ++S+ +H R AS+ D ++IWD L H+ V +
Sbjct: 290 QALEGHEAAVLSVSY-----SHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSV 344
Query: 346 RWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK 405
+ + +++ D T+K+W G + TLEGH WV ++ S D + A+ K
Sbjct: 345 IFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVK 404
Query: 406 -YDPANPEESSKHALAKYQAQCP------EGEKLVSGSDDFTLFLWNPEKEKKSLAR-MT 457
+D S +H L ++ + + L S SDD T+ +W + SL +
Sbjct: 405 IWDTGTG--SLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW--DTGTGSLQHTLE 460
Query: 458 GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLL 517
GH+ + V FS D R++ASAS D+++++WD G TL GH V V++S DSRLL
Sbjct: 461 GHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLL 520
Query: 518 VSGSADSTLKVWNMKTKKIE 537
S S D T+++W+++ + ++
Sbjct: 521 ASASNDQTVRIWDIEARSLQ 540
Score = 317 (116.6 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 89/297 (29%), Positives = 135/297 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C ++ GH AV+SV +S + R LAS S D TV+ WD T + EGH V + +S
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD 318
DS+ L S + + WD+ TG + + GH+ W+ ++ + +H + AS+ D
Sbjct: 348 HDSRLLASA-SDSTVKIWDTGTGS-LQHTLEGHRDWVRSVIF-----SHDSQLLASASDD 400
Query: 319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLE 377
++IWD L H V + + S L+ SAS D T+K+W G + TLE
Sbjct: 401 STVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLE 460
Query: 378 GHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQAQCP------EGE 430
GH WV ++ S D + A+ + +D + S KH L + + +
Sbjct: 461 GHRDWVRSVIFSHDSRLLASASDDRTVRIWD--TEKGSHKHTLEGHSSLVTSVSFSHDSR 518
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
L S S+D T+ +W+ E AR H F D I A FDK+ LW
Sbjct: 519 LLASASNDQTVRIWDIE------ARSLQHT-------FDLDATIEAMR-FDKATSLW 561
Score = 231 (86.4 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 62/198 (31%), Positives = 95/198 (47%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFY-VNET 160
C ++ GH AV+SV +S + R LAS S D TV+ WD T + EG L V +
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
++ LA ++ V I Q ++ GH + V SV FS + +
Sbjct: 348 HDSRLLASA-------SDSTVKIWDTGTGSLQ--------HTLEGHRDWVRSVIFSHDSQ 392
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
LAS S D+TV+ WD T + EGH+ WV + +S DS+ L S + + WD+ T
Sbjct: 393 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 452
Query: 281 GKQIGQPMRGHKQWITAL 298
G + + GH+ W+ ++
Sbjct: 453 GS-LQHTLEGHRDWVRSV 469
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 310 (114.2 bits), Expect = 4.7e-27, P = 4.7e-27
Identities = 84/276 (30%), Positives = 134/276 (48%)
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG--SGLIYSASQDR 360
F+ + C F + D +IWD + + L H V I + + + S D+
Sbjct: 100 FNKSGSC--FITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDK 157
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDY-LMRVEATSTGGFKYDPANPEESSKHA- 418
T K+W A G T GH + LA + L+ + T +D + EE S A
Sbjct: 158 TCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAG 217
Query: 419 -LAKYQAQC--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII 475
A+ + C G++LV+GS D T LW+ +K + ++GH+ I+CV+F+ D +I
Sbjct: 218 HFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRK-VHVLSGHRGEISCVQFNWDCSLI 276
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
A+AS DKS K+WD G+ + TL GH V V ++ +L+ + SAD T +V++ T +
Sbjct: 277 ATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQ 336
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
L GH E+ V + G +V + DK R+W
Sbjct: 337 CLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVW 372
Score = 276 (102.2 bits), Expect = 9.9e-22, P = 9.9e-22
Identities = 81/337 (24%), Positives = 148/337 (43%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS-PD 260
++ H + +V F+ +G +GS D T + WD + L EGH++ V IA++ P
Sbjct: 87 ALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPY 146
Query: 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
++ +G + W + TGK RGH I L++ P Q A+ D
Sbjct: 147 GDKVATGSFDKTCKLWSAETGKCF-YTFRGHTAEIVCLAFNP-----QSTLVATGSMDTT 200
Query: 321 IRIWDVILSQCVRVLTSHTRSVT--CIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEG 378
++WDV + V L H + C G L+ + S D T +W G L G
Sbjct: 201 AKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLV-TGSFDHTAILWDVPSGRKVHVLSG 259
Query: 379 HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ---CPE--GEKLV 433
H ++ + + D + A+ K A + L C G+ +
Sbjct: 260 HRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIA 319
Query: 434 SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK 493
+ S D T +++ + + L ++ GH+ I+ V F+ G + +AS DK+ ++W + G
Sbjct: 320 TASADGTSRVFSTDTFQ-CLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGA 378
Query: 494 FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
+ L GH ++ A++ + +++GS D+T ++W+
Sbjct: 379 CLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIWH 415
Score = 253 (94.1 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 85/355 (23%), Positives = 149/355 (41%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ H + +V F+ +G +GS D T + WD + L EG + Y
Sbjct: 87 ALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYA------- 139
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
+ + ++V + K +C + GH ++ + F+P +A+
Sbjct: 140 -----IAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVAT 194
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
GS DTT + WDV + + GH ++ + ++ +LV+G + WD +G+++
Sbjct: 195 GSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKV 254
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV-- 342
+ GH+ I+ + + N C A++ D + ++WD QC+ L H V
Sbjct: 255 -HVLSGHRGEISCVQF-----NWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLD 308
Query: 343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRT-LEGH----------AHWVNTLALSTD 391
C + G LI +AS D T +V+ ++D C LEGH A L S D
Sbjct: 309 VCFNYTGQ-LIATASADGTSRVF-STDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVD 366
Query: 392 YLMRVEATSTGG-FKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
RV TG + + +E A Y EG+ +++GS D T +W+
Sbjct: 367 KTSRVWCVKTGACLQVLEGHSDEIFSCAF-NY-----EGDTIITGSKDNTCRIWH 415
Score = 126 (49.4 bits), Expect = 9.7e-05, P = 9.6e-05
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA-PDG 556
L+ H+ + VA++ ++GS D T K+W+ + + L GH + VYA+ + P G
Sbjct: 88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 557 EKVASGGKDKVLRLW 571
+KVA+G DK +LW
Sbjct: 148 DKVATGSFDKTCKLW 162
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 43/194 (22%), Positives = 82/194 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
+C + GH ++ + F+P +A+GS DTT + WDV + + G
Sbjct: 168 KCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGH--------- 218
Query: 161 EITKTLADVLPLDTLNT--EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN 218
A+++ L NT + +V + A+ P R + GH + V+F+ +
Sbjct: 219 -----FAEIISL-CFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWD 272
Query: 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS 278
+A+ S D + + WD L GH VL + ++ + + + +G + +
Sbjct: 273 CSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFST 332
Query: 279 STGKQIGQPMRGHK 292
T + + Q + GHK
Sbjct: 333 DTFQCLCQ-LEGHK 345
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 333 (122.3 bits), Expect = 6.9e-27, P = 6.9e-27
Identities = 69/141 (48%), Positives = 91/141 (64%)
Query: 432 LVSGSDDFTLFLWNPEKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
L SGSDD T+ LW+P SL + + GH + V FSPDGR++AS SFDK+++LWD
Sbjct: 710 LASGSDDETVRLWDPATG--SLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPA 767
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
G TLRGH V VA+S D RLL SGS D T+++W+ T ++Q L GH D V +V
Sbjct: 768 TGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSV 827
Query: 551 DWAPDGEKVASGGKDKVLRLW 571
++PDG +ASG DK +RLW
Sbjct: 828 AFSPDGRLLASGSFDKTVRLW 848
Score = 288 (106.4 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 74/195 (37%), Positives = 107/195 (54%)
Query: 370 GVMCRTLEGHAH--WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP 427
G +TLEGH++ W + S D +R+ +TG + E S L+ A P
Sbjct: 693 GAELQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQ---TLEGHSGWVLSV--AFSP 747
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
+G L SGS D T+ LW+P SL + + GH + V FSPDGR++AS SFDK+++L
Sbjct: 748 DGRLLASGSFDKTVRLWDPATG--SLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRL 805
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
WD G TLRGH V VA+S D RLL SGS D T+++W+ T ++Q L G
Sbjct: 806 WDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGT- 864
Query: 547 VYAVDWAPDGEKVAS 561
V + ++ DG +++
Sbjct: 865 VTELQFSQDGSYIST 879
Score = 264 (98.0 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 59/176 (33%), Positives = 93/176 (52%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH+ +V +V LASGS D TVR WD T + EGH WVL +A+SPD
Sbjct: 698 TLEGHSNSVWAV--------LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDG 749
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+ L SG + + WD +TG + Q +RGH W+ ++++ P R AS D +
Sbjct: 750 RLLASGSFDKTVRLWDPATGS-LQQTLRGHSNWVRSVAFSP-----DGRLLASGSFDKTV 803
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
R+WD + L H+ +V + + G L+ S S D+T+++W + G + +TL
Sbjct: 804 RLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTL 859
Score = 224 (83.9 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 44/98 (44%), Positives = 63/98 (64%)
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++AS S D++++LWD G TL GH V VA+S D RLL SGS D T+++W+ T
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPAT 768
Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++Q L GH + V +V ++PDG +ASG DK +RLW
Sbjct: 769 GSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLW 806
Score = 184 (69.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 62/179 (34%), Positives = 85/179 (47%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEIT 163
++ GH+ +V +V LASGS D TVR WD T + EG + ++ V +
Sbjct: 698 TLEGHSNSVWAV--------LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDG 749
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFSPNGRSL 222
+ LA D T + D P T ++ GH+ V SV FSP+GR L
Sbjct: 750 RLLASG-SFD--KTVRLWD------------PATGSLQQTLRGHSNWVRSVAFSPDGRLL 794
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
ASGS D TVR WD T + GH V +A+SPD + L SG + + WD +TG
Sbjct: 795 ASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATG 853
Score = 184 (69.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 52/193 (26%), Positives = 94/193 (48%)
Query: 291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS 350
+++W L H N AS D +R+WD + L H+ V + +
Sbjct: 689 NEKWGAELQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPD 748
Query: 351 G-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDP 408
G L+ S S D+T+++W + G + +TL GH++WV ++A S D + + + +DP
Sbjct: 749 GRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDP 808
Query: 409 ANP--EESSK-HA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN 464
A +++ + H+ + A P+G L SGS D T+ LW+P +L + + +
Sbjct: 809 ATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATG--TLQQTLIIKGTVT 866
Query: 465 CVEFSPDGRIIAS 477
++FS DG I++
Sbjct: 867 ELQFSQDGSYIST 879
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 351 (128.6 bits), Expect = 7.1e-27, Sum P(2) = 7.1e-27
Identities = 122/462 (26%), Positives = 203/462 (43%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H++ V S +SP+G +AS S D T++ W+ P F L +V + ++
Sbjct: 1649 HSKPVNSCCWSPDGTLIASSSWDGTIKIWN-----P-FDTIAKDRLKHVIDASLSYGSIK 1702
Query: 169 VLPLDTLNTEEVVDIVYQKQAV-FQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
N+++++ + + F V + S M H+++V S +G + +GS
Sbjct: 1703 SCKFSA-NSKQILATTMKNDVLLFDVNS-QKLISVMGNHSKSVNHCSLSNDGNYIVTGSD 1760
Query: 228 DTTVRFWDVTTQTPL--FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG---K 282
D T + W T T L F G W C+A+SP L G + + +D S+ +
Sbjct: 1761 DATAKVWSSTLGTQLTNFLIPGDC-WANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYR 1819
Query: 283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT-SHTRS 341
++ + + GH + IT++++ P AS+ +D I++W+V + + +H
Sbjct: 1820 EVAK-LHGHTRAITSITFSP-----SGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDP 1873
Query: 342 VTCIRWGGSGL--IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD--YLMRVE 397
+ CI + + + S S D + KVW + EG + + S D Y+ V
Sbjct: 1874 INCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVS 1933
Query: 398 AT-STGGFKYDPANPEESSK-HA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
S + K H + P+ +KLVSG DF L +WN + +K+ L
Sbjct: 1934 RDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLC 1993
Query: 455 RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD- 513
+ GH I F+ D + I SASFD S+K+WD + G IT+LR H + V SSD
Sbjct: 1994 -LKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLR-HQTRISDVVSSSDA 2051
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPD 555
S + S S D +K W L GH + V + P+
Sbjct: 2052 SGRIFSSSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNPN 2093
Score = 306 (112.8 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 93/391 (23%), Positives = 167/391 (42%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C ++ G + + +S +G +AS D+ + + + + L GH +W+ C ++S
Sbjct: 1514 CKQTITGLEDGATACCYSRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFS 1573
Query: 259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD 318
D K L S + + WD G QI Q + H + + + P N S D
Sbjct: 1574 DDGKTLASSSWDNTVIVWDLIVGNQIHQ-FKDHSRAVNYCEFSPTANN----LLMSCAWD 1628
Query: 319 GAIRIWDVILSQCVRVLTS-HTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV----M 372
+I I++ R S H++ V W G LI S+S D TIK+W D + +
Sbjct: 1629 SSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRL 1688
Query: 373 CRTLEGHAHW--VNTLALSTDYLMRVEATSTGGFKYDPANPEE--SSKHALAKYQAQCP- 427
++ + + + S + + T N ++ S +K C
Sbjct: 1689 KHVIDASLSYGSIKSCKFSANSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSL 1748
Query: 428 --EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIK 485
+G +V+GSDD T +W+ + + NC+ FSP ++A + D +++
Sbjct: 1749 SNDGNYIVTGSDDATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVR 1808
Query: 486 LWD---GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP- 541
L+D I + + L GH +A+ + +S L+ S S D +KVWN++T K E +
Sbjct: 1809 LFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEK 1868
Query: 542 GHGDEVYAVDWAPDGE-KVASGGKDKVLRLW 571
H D + + + P E ++ S D ++W
Sbjct: 1869 AHNDPINCISFNPTNECELISCSDDYSTKVW 1899
Score = 295 (108.9 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 122/492 (24%), Positives = 214/492 (43%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD--VTTQTPLFKCEGTPYLFYVNETEI 162
++ GH+ + FS +G++LAS S D TV WD V Q FK VN E
Sbjct: 1559 TLVGHSNWISCFSFSDDGKTLASSSWDNTVIVWDLIVGNQIHQFKDHSRA----VNYCEF 1614
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL 222
+ T ++L ++ ++ K +F+ + H++ V S +SP+G +
Sbjct: 1615 SPTANNLLMSCAWDSSIIIFNTSDKN-IFR--------NFRSAHSKPVNSCCWSPDGTLI 1665
Query: 223 ASGSGDTTVRFW---DVTTQTPL-FKCEGHKHW--VLCIAWSPDSKQ-LVSGCKNGVIHA 275
AS S D T++ W D + L + + + +S +SKQ L + KN V+
Sbjct: 1666 ASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQILATTMKNDVL-L 1724
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-SQCVRV 334
+D ++ K I M H + + S L++ + D ++W L +Q
Sbjct: 1725 FDVNSQKLISV-MGNHSKSVNHCS-----LSNDGNYIVTGSDDATAKVWSSTLGTQLTNF 1778
Query: 335 LTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRT---LEGHAHWVNTLALST 390
L C+ + + L+ + D T++++ S + R L GH + ++ S
Sbjct: 1779 LIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSP 1838
Query: 391 ----------DYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE-KLVSGSDDF 439
D L++V T +Y + ++ + P E +L+S SDD+
Sbjct: 1839 SGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCIS-FN---PTNECELISCSDDY 1894
Query: 440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR 499
+ +W+ +L+ + +CV +SPDG+ IA+ S D SI ++ K + L+
Sbjct: 1895 STKVWSRFTTSTTLSTEGSTNTIKHCV-YSPDGKYIATVSRDCSIAVYLCSSKKLLFRLK 1953
Query: 500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV 559
GH V +S DS+ LVSG D L+VWN+KT+K L GH + + D + +
Sbjct: 1954 GHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYI 2013
Query: 560 ASGGKDKVLRLW 571
S D +++W
Sbjct: 2014 ISASFDGSVKVW 2025
Score = 236 (88.1 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 107/489 (21%), Positives = 195/489 (39%)
Query: 79 NTEEVVDIVYQKQAV-FQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFW 137
N+++++ + + F V + S M H+++V S +G + +GS D T + W
Sbjct: 1709 NSKQILATTMKNDVLLFDVNS-QKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVW 1767
Query: 138 DVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT 197
T T L T +L + + PL + + ++ + +
Sbjct: 1768 SSTLGTQL-----TNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSS----NTIY 1818
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE-GHKHWVLCIA 256
R + + GH A+ S+ FSP+G +AS S D ++ W+V T + E H + CI+
Sbjct: 1819 REVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCIS 1878
Query: 257 WSPDSK-QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS 315
++P ++ +L+S + W T G I + P + A+
Sbjct: 1879 FNPTNECELISCSDDYSTKVWSRFTTSTT-LSTEGSTNTIKHCVYSP-----DGKYIATV 1932
Query: 316 GKDGAIRIWDVILSQCVRVLTSHTRSVT-CIRWGGSGLIYSASQDRTIKVW--RASDGVM 372
+D +I ++ + + L HT V C S + S D ++VW + ++
Sbjct: 1933 SRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELL 1992
Query: 373 CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEE--SSKHA--LAKYQAQCP 427
C L+GH+ + + D + A+ G K +D E S +H ++ +
Sbjct: 1993 C--LKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLRHQTRISDVVSSSD 2050
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP----------------- 470
++ S SDD + W P LA +TGH I V+F+P
Sbjct: 2051 ASGRIFSSSDDGIIKSWYPVAGS-CLATLTGHSGPIKQVQFNPNSGGGGSSSFSSFSSFS 2109
Query: 471 ---DGRI---IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524
D + IAS+S D ++KLW+ T H ++ +S D + + + D
Sbjct: 2110 SSSDAPVTLSIASSSDDGTVKLWE--FNSATATTSAHKGSINQCVFSKDGKYVATCGQDC 2167
Query: 525 TLKVWNMKT 533
L +W+ KT
Sbjct: 2168 VLNIWDAKT 2176
Score = 215 (80.7 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 120/515 (23%), Positives = 210/515 (40%)
Query: 99 VTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF---KCEGTPY-- 153
+ R + + GH A+ S+ FSP+G +AS S D ++ W+V T + K P
Sbjct: 1817 IYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINC 1876
Query: 154 LFY--VNETEI--------TKTLADVLPLDTLNTE----EVVDIVYQKQAVFQVRPVTR- 198
+ + NE E+ TK + TL+TE + VY + + V+R
Sbjct: 1877 ISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKY-IATVSRD 1935
Query: 199 -------CTSS-----MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE 246
C+S + GH + V FSP+ + L SG D +R W++ TQ L +
Sbjct: 1936 CSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLK 1995
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLN 306
GH + ++ D K ++S +G + WD+ G +I +R H+ T +S + +
Sbjct: 1996 GHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITS-LR-HQ---TRIS-DVVSSS 2049
Query: 307 HQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVW 365
R SS DG I+ W + C+ LT H+ + +++ SG S+S
Sbjct: 2050 DASGRIFSSSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNPNSGGGGSSSFSSFSSFS 2109
Query: 366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ 425
+SD + ++ + T+ L ++ AT+T N SK KY A
Sbjct: 2110 SSSDAPVTLSIASSSD-DGTVKL-WEFN---SATATTSAHKGSINQCVFSKDG--KYVAT 2162
Query: 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRI---IASASFDK 482
C G+ D L +W+ K +L M + C F+ G + + + +
Sbjct: 2163 C--GQ-------DCVLNIWDA-KTHINLKTMIFESPVTTC-SFNRSGVLFIGLQDGTLEV 2211
Query: 483 SIKLWDGRIGKF-----ITTLRGHVQAVYMVAWSSDSRLLVSGSA-DSTLKVWNMKTKKI 536
K W + K IT H S D L + S + + + N K
Sbjct: 2212 YSKDWKTVLHKEKTNGKITRSSAHPSLNIQSTESPDYIDLFAFSTWTNCVNLLNCSEKYF 2271
Query: 537 EQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ + D V +V+++ G+ +A+G + K ++++
Sbjct: 2272 DP-IVSFDDWVESVEFSTSGDLLAAGSRTKQVKIF 2305
Score = 197 (74.4 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 53/195 (27%), Positives = 96/195 (49%)
Query: 392 YLMRVEATSTGGFKYDP-----ANPE--ESSKHALAKYQ----AQC--PEGEKLVSGSDD 438
Y +V A+ +GG K+ P+ +S K + + A C +G + S D
Sbjct: 1484 YCHKVAASESGGLKHKTWIEWLNKPQIKDSCKQTITGLEDGATACCYSRDGSMIASAGKD 1543
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL 498
+ ++ + L + GH I+C FS DG+ +AS+S+D ++ +WD +G I
Sbjct: 1544 SIIHIFKASNGSELLT-LVGHSNWISCFSFSDDGKTLASSSWDNTVIVWDLIVGNQIHQF 1602
Query: 499 RGHVQAVYMVAWS-SDSRLLVSGSADSTLKVWNMKTKKIEQDL-PGHGDEVYAVDWAPDG 556
+ H +AV +S + + LL+S + DS++ ++N K I ++ H V + W+PDG
Sbjct: 1603 KDHSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSPDG 1662
Query: 557 EKVASGGKDKVLRLW 571
+AS D +++W
Sbjct: 1663 TLIASSSWDGTIKIW 1677
Score = 173 (66.0 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 59/262 (22%), Positives = 121/262 (46%)
Query: 327 ILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNT 385
I C + +T T + G +I SA +D I +++AS+G TL GH++W++
Sbjct: 1510 IKDSCKQTITGLEDGATACCYSRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISC 1569
Query: 386 LALSTD-YLMRVEATSTGGFKYD--PANPEESSK-HALA-KYQAQCPEGEKLV-SGSDDF 439
+ S D + + +D N K H+ A Y P L+ S + D
Sbjct: 1570 FSFSDDGKTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDS 1629
Query: 440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD--GRIGKFITT 497
++ ++N + + H + +N +SPDG +IAS+S+D +IK+W+ I K
Sbjct: 1630 SIIIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAK--DR 1687
Query: 498 LRGHVQA------VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVD 551
L+ + A + +S++S+ +++ + + + ++++ ++K+ + H V
Sbjct: 1688 LKHVIDASLSYGSIKSCKFSANSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCS 1747
Query: 552 WAPDGEKVASGGKDKVLRLWQN 573
+ DG + +G D ++W +
Sbjct: 1748 LSNDGNYIVTGSDDATAKVWSS 1769
Score = 172 (65.6 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 112/491 (22%), Positives = 197/491 (40%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG----TPYLFYVNETE 161
+ GH + V FSP+ + L SG D +R W++ TQ L +G F+ + +
Sbjct: 1952 LKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQK 2011
Query: 162 -ITKTLAD--VLPLDTLNTEEVV---------DIVYQKQA---VFQ------VR---PVT 197
I D V D E+ D+V A +F ++ PV
Sbjct: 2012 YIISASFDGSVKVWDAQFGSEITSLRHQTRISDVVSSSDASGRIFSSSDDGIIKSWYPVA 2071
Query: 198 -RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIA 256
C +++ GH+ + V+F+PN SG G ++ F ++ F L IA
Sbjct: 2072 GSCLATLTGHSGPIKQVQFNPN-----SGGGGSS-SFSSFSS----FSSSSDAPVTLSIA 2121
Query: 257 WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
S D +G + W+ ++ HK I + + + A+ G
Sbjct: 2122 SSSD---------DGTVKLWEFNSATATTS---AHKGSINQCVF-----SKDGKYVATCG 2164
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV----WRA----- 367
+D + IWD ++ + + TC + SG+++ QD T++V W+
Sbjct: 2165 QDCVLNIWDAKTHINLKTMIFESPVTTC-SFNRSGVLFIGLQDGTLEVYSKDWKTVLHKE 2223
Query: 368 -SDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ--A 424
++G + R+ H S DY+ + A ST + N E + +
Sbjct: 2224 KTNGKITRS-SAHPSLNIQSTESPDYI-DLFAFSTWTNCVNLLNCSEKYFDPIVSFDDWV 2281
Query: 425 QCPE----GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
+ E G+ L +GS + +++P +K + T + + FSP+ + +A +F
Sbjct: 2282 ESVEFSTSGDLLAAGSRTKQVKIFSPLNDKP-VTHQTS-SSYVTSLSFSPNDKYLAIGTF 2339
Query: 481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL 540
D +++L D GK L V ++ + + DS LVS S D +L VWN T IE +
Sbjct: 2340 DGTVELLDIASGKLRRILTTQVSSITSLKFL-DSTRLVSVSNDRSLIVWNFSTSSIENEF 2398
Query: 541 PGHGDEVYAVD 551
H + ++D
Sbjct: 2399 I-HQSPITSMD 2408
Score = 37 (18.1 bits), Expect = 7.1e-27, Sum P(2) = 7.1e-27
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 553 APDGEKVASGGKDKVLRLWQ 572
AP +AS D ++LW+
Sbjct: 2114 APVTLSIASSSDDGTVKLWE 2133
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 312 (114.9 bits), Expect = 7.7e-27, Sum P(2) = 7.7e-27
Identities = 85/266 (31%), Positives = 131/266 (49%)
Query: 311 RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDG 370
R S D +++W + +C+R L HT V + + +I S S DRT+KVW A G
Sbjct: 315 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-IIISGSTDRTLKVWNAETG 373
Query: 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE 428
TL GH V + L ++ +T +D + H L + A +C +
Sbjct: 374 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRV-WDIETGQ--CLHVLMGHVAAVRCVQ 430
Query: 429 --GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
G ++VSG+ DF + +W+PE E L + GH + ++F DG + S S D SI++
Sbjct: 431 YDGRRVVSGAYDFMVKVWDPETET-CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 487
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
WD G I TL GH Q++ D+ +LVSG+ADST+K+W++KT + Q L G
Sbjct: 488 WDVETGNCIHTLTGH-QSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPSKH 545
Query: 547 VYAVDWAPDGEK-VASGGKDKVLRLW 571
AV + V + D ++LW
Sbjct: 546 QSAVTCLQFNKNFVITSSDDGTVKLW 571
Score = 297 (109.6 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 87/312 (27%), Positives = 149/312 (47%)
Query: 198 RCTSSMPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIA 256
R + GH + VI+ ++F G + SGS D T++ W T L GH V
Sbjct: 293 RSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---- 346
Query: 257 WSPDSKQ--LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
WS + ++SG + + W++ TG+ I + GH + + HL H+ +R S
Sbjct: 347 WSSQMRDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTVRCM-----HL-HE-KRVVS 398
Query: 315 SGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCR 374
+D +R+WD+ QC+ VL H +V C+++ G ++ S + D +KVW
Sbjct: 399 GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLH 457
Query: 375 TLEGHAHWVNTLALSTDYLMRVEA-TSTGGFKYDPANPEESSKHALAKYQAQCPEGEK-- 431
TL+GH + V +L +++ TS + + N H L +Q+ E
Sbjct: 458 TLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN----CIHTLTGHQSLTSGMELKD 513
Query: 432 --LVSGSDDFTLFLWNPEKEKKSLARMTG---HQQLINCVEFSPDGRIIASASFDKSIKL 486
LVSG+ D T+ +W+ K + L + G HQ + C++F+ + + ++S D ++KL
Sbjct: 514 NILVSGNADSTVKIWDI-KTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKL 570
Query: 487 WDGRIGKFITTL 498
WD + G+FI L
Sbjct: 571 WDLKTGEFIRNL 582
Score = 261 (96.9 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 80/305 (26%), Positives = 144/305 (47%)
Query: 246 EGHK-HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304
+GH H + C+ + ++VSG + + W + TGK + + + GH T W
Sbjct: 299 KGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSS-- 349
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
+ S D +++W+ +C+ L HT +V C+ ++ S S+D T++V
Sbjct: 350 -QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRV 407
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE-ESSKHALAK-- 421
W G L GH V + Y R + F +PE E+ H L
Sbjct: 408 WDIETGQCLHVLMGHVAAVRCV----QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 463
Query: 422 ---YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
Y Q +G +VSGS D ++ +W+ E + +TGHQ L + +E + I+ S
Sbjct: 464 NRVYSLQF-DGIHVVSGSLDTSIRVWDVETGN-CIHTLTGHQSLTSGMELKDN--ILVSG 519
Query: 479 SFDKSIKLWDGRIGKFITTLRG---HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
+ D ++K+WD + G+ + TL+G H AV + ++ + +++ S D T+K+W++KT +
Sbjct: 520 NADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGE 577
Query: 536 IEQDL 540
++L
Sbjct: 578 FIRNL 582
Score = 185 (70.2 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 47/126 (37%), Positives = 66/126 (52%)
Query: 449 EKKSLARMTGHQQ-LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
E +S + GH +I C++F G I S S D ++K+W GK + TL GH V
Sbjct: 291 ELRSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV-- 346
Query: 508 VAWSSDSR--LLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
WSS R +++SGS D TLKVWN +T + L GH V + ++V SG +D
Sbjct: 347 --WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRD 402
Query: 566 KVLRLW 571
LR+W
Sbjct: 403 ATLRVW 408
Score = 168 (64.2 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 65/262 (24%), Positives = 115/262 (43%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG---TPYLFYV 157
+C ++ GH V S + N + SGS D T++ W+ T + G T ++
Sbjct: 334 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL 391
Query: 158 NETEITKTLADV-LPLDTLNTEEVVDIV-----------YQKQAV------FQVR---PV 196
+E + D L + + T + + ++ Y + V F V+ P
Sbjct: 392 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPE 451
Query: 197 TR-CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCI 255
T C ++ GH V S++F +G + SGS DT++R WDV T + GH+ L
Sbjct: 452 TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTS 507
Query: 256 AWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS 315
LVSG + + WD TG+ + Q ++G + +A++ F+ N +S
Sbjct: 508 GMELKDNILVSGNADSTVKIWDIKTGQCL-QTLQGPSKHQSAVTCLQFNKNF----VITS 562
Query: 316 GKDGAIRIWDVILSQCVRVLTS 337
DG +++WD+ + +R L +
Sbjct: 563 SDDGTVKLWDLKTGEFIRNLVT 584
Score = 59 (25.8 bits), Expect = 7.7e-27, Sum P(2) = 7.7e-27
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 101 RCTSSMPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFWDVTT 141
R + GH + VI+ ++F G + SGS D T++ W T
Sbjct: 293 RSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVT 332
Score = 41 (19.5 bits), Expect = 5.9e-25, Sum P(2) = 5.9e-25
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 121 NGRSLASGS-GDTTVRFWDVTTQTPLFKCEGTPYLF 155
+G + S S G + D T+ T L C TP F
Sbjct: 96 HGSEVRSFSLGKKPCKVSDYTSTTGLVPCSATPTTF 131
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 308 (113.5 bits), Expect = 7.9e-27, P = 7.9e-27
Identities = 81/290 (27%), Positives = 141/290 (48%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
RGH+ IT++ F LN ++ AS D ++IW + L H +V C+++
Sbjct: 17 RGHRDAITSVD---FSLNK--KQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFS 71
Query: 349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
SG L+ S S+D+T+ +W S + H V ++ S+D V A+ K
Sbjct: 72 PSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVW 131
Query: 408 PANPEES----SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL 462
+ ++ S+H + P+G + S SDD T+ LW+ + ++ + H
Sbjct: 132 TVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWD-KTSRECIHSFCEHGGF 190
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
N VEF P G IA+A DK++K+WD R+ + + + H AV +++ L++ S
Sbjct: 191 ANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASN 250
Query: 523 DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
DSTLK+ ++ ++ L GH V ++ G+ ASGG D+ + +W+
Sbjct: 251 DSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWK 300
Score = 268 (99.4 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 79/283 (27%), Positives = 127/283 (44%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH +A+ SV FS N + LASGS D+ ++ W + Q + C V + +
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAY-C-------LVGHKDAVMCV- 68
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
P L D K V V ++ H V SV FS +G+SL + S
Sbjct: 69 QFSPSGHLVASGSRD----KTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASD 124
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
D T++ W V Q LF H +WV C +SPD + + S + + WD T ++
Sbjct: 125 DKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDK-TSRECIHS 183
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
H + + FH + C A++G D +++WDV +++ ++ HT +V + +
Sbjct: 184 FCEHGGFANHVE---FHPSGTC--IAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSF 238
Query: 348 GGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
SG + +AS D T+K+ +G + TL GH +A S
Sbjct: 239 HPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFS 281
Score = 251 (93.4 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 75/300 (25%), Positives = 126/300 (42%)
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF-HL 305
GH+ + + +S + KQL SG + + W S + + GHK + + + P HL
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIW-SMKPQMRAYCLVGHKDAVMCVQFSPSGHL 76
Query: 306 NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKV 364
AS +D + +W + V +HT +V + + G + +AS D+TIKV
Sbjct: 77 ------VASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKV 130
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE---ESSKHA-L 419
W +L H +WV S D + A+ K +D + E +H
Sbjct: 131 WTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGF 190
Query: 420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + P G + + D T+ +W+ + + L H +N + F P G + +AS
Sbjct: 191 ANHVEFHPSGTCIAAAGTDKTVKVWDV-RMNRLLQHYQVHTAAVNSLSFHPSGNYLITAS 249
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD 539
D ++K+ D G+ + TL GH VA+S SG +D + VW + D
Sbjct: 250 NDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKTNFSAADYD 309
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 52/194 (26%), Positives = 84/194 (43%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-CEGTPYLFYVNETEIT 163
S+ H V +FSP+GR +AS S D TV+ WD T++ + CE + + N E
Sbjct: 141 SLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCE---HGGFANHVEFH 197
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
+ + T T +V D VR + R H AV S+ F P+G L
Sbjct: 198 PSGTCIAAAGTDKTVKVWD----------VR-MNRLLQHYQVHTAAVNSLSFHPSGNYLI 246
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS-TGK 282
+ S D+T++ D+ L+ GH+ C+A+S SG + + W ++ +
Sbjct: 247 TASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKTNFSAA 306
Query: 283 QIGQPMRGHKQWIT 296
++ HK T
Sbjct: 307 DYDGVLKTHKSGAT 320
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 241 (89.9 bits), Expect = 9.6e-27, Sum P(3) = 9.6e-27
Identities = 62/203 (30%), Positives = 93/203 (45%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH ++V + F G+ LAS S D T++ WD + GH H V +A P+
Sbjct: 145 TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+VS ++ I W+ +TG + + GH++W+ + P N ASS D +
Sbjct: 205 DHIVSASRDKTIKMWEVATGYCV-KTFTGHREWVRMV--RP---NQDGTLIASSSNDQTV 258
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWG------------GS-----G----LIYSASQDR 360
R+W V +C L H V CI W GS G + S S+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDK 318
Query: 361 TIKVWRASDGVMCRTLEGHAHWV 383
TIK+W S G+ TL GH +WV
Sbjct: 319 TIKMWDVSIGMCLMTLVGHDNWV 341
Score = 227 (85.0 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 56/205 (27%), Positives = 94/205 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C +M GH V SV PNG + S S D T++ W+V T + GH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPN 243
Query: 259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP--FH------LNHQCR 310
D + S + + W +T K+ +R H+ + +SW P H + +
Sbjct: 244 QDGTLIASSSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESAHPTILEATGSETK 302
Query: 311 R------FASSG-KDGAIRIWDVILSQCVRVLTSHTRSV--TCIRWGGSGLIYSASQDRT 361
+ F SG +D I++WDV + C+ L H V + GG ++ S + D+T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIV-SCADDKT 361
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTL 386
+++W + +TL H H+V +L
Sbjct: 362 LRIWDYKNKRCTKTLSAHEHFVTSL 386
Score = 222 (83.2 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 75/283 (26%), Positives = 124/283 (43%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH ++V + F G+ LAS S D T++ WD F+C T + N + +
Sbjct: 145 TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQG----FECIRTMHGHDHNVSSVA- 199
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
++P N + +V K C + GH E V V+ + +G +AS
Sbjct: 200 ----IMP----NGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIAS 251
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
S D TVR W V T+ + H+H V CI+W+P+S ++ A S T K+
Sbjct: 252 SSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPT------ILEATGSET-KKS 304
Query: 285 GQP----MRGH-----KQWITAL-----------SWEPFHLNHQCRRF-ASSGKDGAIRI 323
G+P + G K W ++ +W L H ++ S D +RI
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRI 364
Query: 324 WDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
WD +C + L++H VT + + + + + S D+T+KVW
Sbjct: 365 WDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 217 (81.4 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 43/129 (33%), Positives = 73/129 (56%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W P +K ++GH+ + V F P +I SAS D +IK+WD G F TL+GH
Sbjct: 94 WIPRPPEKYA--LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTD 151
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+V +++ +LL S SAD T+K+W+ + + + + GH V +V P+G+ + S
Sbjct: 152 SVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 564 KDKVLRLWQ 572
+DK +++W+
Sbjct: 212 RDKTIKMWE 220
Score = 209 (78.6 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 56/178 (31%), Positives = 87/178 (48%)
Query: 403 GFKYDPAN--PEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
G K DP P K+AL+ +++ P +VS S+D T+ +W + E
Sbjct: 86 GQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVW--DHETGDFE 143
Query: 455 R-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD 513
R + GH + + F G+++AS S D +IKLWD + + I T+ GH V VA +
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+VS S D T+K+W + T + GH + V V DG +AS D+ +R+W
Sbjct: 204 GDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVW 261
Score = 206 (77.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 46/127 (36%), Positives = 70/127 (55%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G+ L S S D T+ LW+ + + + M GH ++ V P+G I SAS DK+IK+W+
Sbjct: 162 GKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVY 548
G + T GH + V MV + D L+ S S D T++VW + TK+ + +L H V
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 549 AVDWAPD 555
+ WAP+
Sbjct: 281 CISWAPE 287
Score = 193 (73.0 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 63/237 (26%), Positives = 102/237 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C +M GH V SV PNG + S S D T++ W+V T C T + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGY----CVKT-FTGHREWVR 238
Query: 162 ITKTLAD-VLPLDTLNTEEV-VDIVYQKQAVFQVRP---VTRCTSSMPGHAEAVI----- 211
+ + D L + N + V V +V K+ ++R V C S P A I
Sbjct: 239 MVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATG 298
Query: 212 --SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
+ K G L SGS D T++ WDV+ L GH +WV + P K +VS
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCAD 358
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWD 325
+ + WD K+ + + H+ ++T+L + H+ + +G D +++W+
Sbjct: 359 DKTLRIWDYKN-KRCTKTLSAHEHFVTSLDF------HKTAPYVVTGSVDQTVKVWE 408
Score = 187 (70.9 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 63/234 (26%), Positives = 106/234 (45%)
Query: 160 TEITKTLADVLPLDT-LN-TEEVVDI---VYQKQAVFQVRPVTRCTSSMPGHAEAVISVK 214
T + + V+ L++ LN +E ++I + QK+ + P ++ GH V V
Sbjct: 56 TSVIRLQKKVMELESKLNEAKEEINIGGPIGQKRDPKEWIPRPPEKYALSGHRSPVTRVI 115
Query: 215 FSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH 274
F P + S S D T++ WD T +GH V I++ K L S + I
Sbjct: 116 FHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIK 175
Query: 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV 334
WD G + + M GH +++++ P + +H S+ +D I++W+V CV+
Sbjct: 176 LWDFQ-GFECIRTMHGHDHNVSSVAIMP-NGDH----IVSASRDKTIKMWEVATGYCVKT 229
Query: 335 LTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLA 387
T H V +R G LI S+S D+T++VW + L H H V ++
Sbjct: 230 FTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 54/187 (28%), Positives = 89/187 (47%)
Query: 335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS-TDY 392
L+ H VT + + +I SAS+D TIKVW G RTL+GH V ++ T
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 393 LMR-VEATST---GGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L+ A T F+ ++ H ++ A P G+ +VS S D T+ +W
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV-AIMPNGDHIVSASRDKTIKMWEVA 222
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ TGH++ + V + DG +IAS+S D+++++W + LR H V
Sbjct: 223 TGY-CVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 508 VAWSSDS 514
++W+ +S
Sbjct: 282 ISWAPES 288
Score = 164 (62.8 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 38/129 (29%), Positives = 63/129 (48%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W PE ++ TG + + G + S S DK+IK+WD IG + TL GH
Sbjct: 284 WAPESAHPTILEATGSETK----KSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDN 339
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V V + +VS + D TL++W+ K K+ + L H V ++D+ V +G
Sbjct: 340 WVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGS 399
Query: 564 KDKVLRLWQ 572
D+ +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 141 (54.7 bits), Expect = 9.5e-22, Sum P(2) = 9.5e-22
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L+SGS D T+ +W+ L + GH + V P G+ I S + DK++++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGM-CLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWD 366
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
+ + TL H V + + + +V+GS D T+KVW +
Sbjct: 367 YKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 101 (40.6 bits), Expect = 9.6e-27, Sum P(3) = 9.6e-27
Identities = 18/64 (28%), Positives = 37/64 (57%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P G+ +VS +DD TL +W+ K K+ ++ H+ + ++F + + S D+++K+
Sbjct: 348 PGGKYIVSCADDKTLRIWD-YKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Query: 487 WDGR 490
W+ R
Sbjct: 407 WECR 410
Score = 62 (26.9 bits), Expect = 9.6e-27, Sum P(3) = 9.6e-27
Identities = 23/84 (27%), Positives = 39/84 (46%)
Query: 63 TEITKTLADVLPLDT-LN-TEEVVDI---VYQKQAVFQVRPVTRCTSSMPGHAEAVISVK 117
T + + V+ L++ LN +E ++I + QK+ + P ++ GH V V
Sbjct: 56 TSVIRLQKKVMELESKLNEAKEEINIGGPIGQKRDPKEWIPRPPEKYALSGHRSPVTRVI 115
Query: 118 FSPNGRSLASGSGDTTVRFWDVTT 141
F P + S S D T++ WD T
Sbjct: 116 FHPVFSVIVSASEDATIKVWDHET 139
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 312 (114.9 bits), Expect = 9.7e-27, Sum P(2) = 9.7e-27
Identities = 85/266 (31%), Positives = 131/266 (49%)
Query: 311 RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDG 370
R S D +++W + +C+R L HT V + + +I S S DRT+KVW A G
Sbjct: 273 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-IIISGSTDRTLKVWNAETG 331
Query: 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE 428
TL GH V + L ++ +T +D + H L + A +C +
Sbjct: 332 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRV-WDIETGQ--CLHVLMGHVAAVRCVQ 388
Query: 429 --GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
G ++VSG+ DF + +W+PE E L + GH + ++F DG + S S D SI++
Sbjct: 389 YDGRRVVSGAYDFMVKVWDPETET-CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 445
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
WD G I TL GH Q++ D+ +LVSG+ADST+K+W++KT + Q L G
Sbjct: 446 WDVETGNCIHTLTGH-QSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 503
Query: 547 VYAVDWAPDGEK-VASGGKDKVLRLW 571
AV + V + D ++LW
Sbjct: 504 QSAVTCLQFNKNFVITSSDDGTVKLW 529
Score = 297 (109.6 bits), Expect = 9.0e-23, Sum P(2) = 9.0e-23
Identities = 93/339 (27%), Positives = 160/339 (47%)
Query: 203 MPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
+ GH + VI+ ++F G + SGS D T++ W T L GH V WS
Sbjct: 256 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 309
Query: 262 KQ--LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG 319
+ ++SG + + W++ TG+ I + GH + + HL H+ +R S +D
Sbjct: 310 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTVRCM-----HL-HE-KRVVSGSRDA 361
Query: 320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
+R+WD+ QC+ VL H +V C+++ G ++ S + D +KVW TL+GH
Sbjct: 362 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 420
Query: 380 AHWVNTLALSTDYLMRVEA-TSTGGFKYDPANPEESSKHALAKYQAQCPEGEK----LVS 434
+ V +L +++ TS + + N H L +Q+ E LVS
Sbjct: 421 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN----CIHTLTGHQSLTSGMELKDNILVS 476
Query: 435 GSDDFTLFLWNPEKEKKSLARMTG---HQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491
G+ D T+ +W+ K + L + G HQ + C++F+ + + ++S D ++KLWD +
Sbjct: 477 GNADSTVKIWDI-KTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 533
Query: 492 GKFI---TTLR--GHVQAVYMVAWSSDSRLLVSGSADST 525
G+FI TL G V+ + S+ + GS + T
Sbjct: 534 GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 572
Score = 261 (96.9 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 80/305 (26%), Positives = 144/305 (47%)
Query: 246 EGHK-HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304
+GH H + C+ + ++VSG + + W + TGK + + + GH T W
Sbjct: 257 KGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSS-- 307
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
+ S D +++W+ +C+ L HT +V C+ ++ S S+D T++V
Sbjct: 308 -QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRV 365
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE-ESSKHALAK-- 421
W G L GH V + Y R + F +PE E+ H L
Sbjct: 366 WDIETGQCLHVLMGHVAAVRCV----QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 421
Query: 422 ---YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
Y Q +G +VSGS D ++ +W+ E + +TGHQ L + +E + I+ S
Sbjct: 422 NRVYSLQF-DGIHVVSGSLDTSIRVWDVETGN-CIHTLTGHQSLTSGMELKDN--ILVSG 477
Query: 479 SFDKSIKLWDGRIGKFITTLRG---HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
+ D ++K+WD + G+ + TL+G H AV + ++ + +++ S D T+K+W++KT +
Sbjct: 478 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGE 535
Query: 536 IEQDL 540
++L
Sbjct: 536 FIRNL 540
Score = 260 (96.6 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 75/244 (30%), Positives = 123/244 (50%)
Query: 333 RVLTSHTRSV-TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+VL H V TC+++ G+ ++ S S D T+KVW A G RTL GH V + + +
Sbjct: 254 KVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 312
Query: 392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE--GEKLVSGSDDFTLFLWNPE 447
++ T K A E H L + + +C +++VSGS D TL +W+ E
Sbjct: 313 IIISGSTDRT--LKVWNAETGECI-HTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIE 369
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ L + GH + CV++ DGR + S ++D +K+WD + TL+GH VY
Sbjct: 370 TGQ-CLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 426
Query: 508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV 567
+ + D +VSGS D++++VW+++T L GH ++ D V SG D
Sbjct: 427 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME-LKDNILV-SGNADST 482
Query: 568 LRLW 571
+++W
Sbjct: 483 VKIW 486
Score = 58 (25.5 bits), Expect = 9.7e-27, Sum P(2) = 9.7e-27
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 106 MPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFWDVTT 141
+ GH + VI+ ++F G + SGS D T++ W T
Sbjct: 256 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVT 290
Score = 37 (18.1 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 121 NGRSLASGS-GDTTVRFWDVTTQTPLFKCEGTPYLF 155
+G + S S G + + T+ T L C TP F
Sbjct: 54 HGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTF 89
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 306 (112.8 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 87/301 (28%), Positives = 140/301 (46%)
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-EGHKHWVLCIAWSPDS 261
+ GH AV ++KF+P G +ASGS D + W V F +GHK+ +L + W+ D
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
Q+VS + + AWD TGKQI + M H ++ + P S DG
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQI-KKMAEHSSFVNSCC--PTRRGPPL--IISGSDDGTA 163
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++WD+ ++ + +T + + + I++ D +KVW G TLEGH
Sbjct: 164 KLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQ 222
Query: 381 HWVNTLALSTD--YLMRVEATSTGGFKYD--PANPE-------ESSKHALAKYQAQC--- 426
+ ++LS D YL+ +D P P+ E +H K +C
Sbjct: 223 DTITGMSLSPDGSYLL-TNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS 281
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN-CVEFSPDGRIIASASFDKSIK 485
P+G K+ +GS D + +W+ ++++ ++ GH +N CV F P II S S DK+I
Sbjct: 282 PDGTKVTAGSSDRMVHIWDTTS-RRTIYKLPGHTGSVNECV-FHPTEPIIGSCSSDKNIY 339
Query: 486 L 486
L
Sbjct: 340 L 340
Score = 230 (86.0 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 71/256 (27%), Positives = 120/256 (46%)
Query: 332 VRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRA-SDGVMCRTLEGHAHWVNTLALS 389
+ +L+ H +V +++ +G LI S S DR I +WR D L+GH + + L +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWT 105
Query: 390 TDYLMRVEATSTGGFK-YDPANPEESSKHA--LAKYQAQCP--EGEKLV-SGSDDFTLFL 443
+D V A+ + +D ++ K A + + CP G L+ SGSDD T L
Sbjct: 106 SDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKL 165
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ +++ ++ Q I V FS I + D +K+WD R G+ TL GH
Sbjct: 166 WDM-RQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQD 223
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKT----KKIEQDLPGHGDE----VYAVDWAPD 555
+ ++ S D L++ D+ L VW+M+ + + GH + W+PD
Sbjct: 224 TITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPD 283
Query: 556 GEKVASGGKDKVLRLW 571
G KV +G D+++ +W
Sbjct: 284 GTKVTAGSSDRMVHIW 299
Score = 205 (77.2 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 64/274 (23%), Positives = 114/274 (41%)
Query: 313 ASSGKDGAIRIWDVILSQCVR--VLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASD 369
AS D I +W V C VL H ++ + W G I SAS D+T++ W
Sbjct: 69 ASGSHDREIFLWRVH-GDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVET 127
Query: 370 GVMCRTLEGHAHWVNTLALST-DYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE 428
G + + H+ +VN+ + + + + G K + + KYQ
Sbjct: 128 GKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVS 187
Query: 429 ----GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI 484
+K+ +G D + +W+ K + ++ + GHQ I + SPDG + + D +
Sbjct: 188 FSDAADKIFTGGVDNDVKVWDLRKGEATMT-LEGHQDTITGMSLSPDGSYLLTNGMDNKL 246
Query: 485 KLWDGRI----GKFITTLRGHV----QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI 536
+WD R + + GH + + +WS D + +GS+D + +W+ +++
Sbjct: 247 CVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRT 306
Query: 537 EQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL 570
LPGH V + P + S DK + L
Sbjct: 307 IYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYL 340
Score = 170 (64.9 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 70/307 (22%), Positives = 120/307 (39%)
Query: 239 QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITAL 298
+ P+ GH V + ++P + SG + I W + ++GHK I L
Sbjct: 43 EAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDL 102
Query: 299 SWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT--CIRWGGSGLIYSA 356
W + S+ D +R WDV + ++ + H+ V C G LI S
Sbjct: 103 HW-----TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISG 157
Query: 357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK 416
S D T K+W +T + + ++ S + TGG D +
Sbjct: 158 SDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSD----AADKIFTGGVDNDVKVWDLRKG 212
Query: 417 HA---LAKYQ------AQCPEGEKLVSGSDDFTLFLWN--PEKEKKSLARM-TGHQQ--- 461
A L +Q + P+G L++ D L +W+ P + ++ GHQ
Sbjct: 213 EATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFE 272
Query: 462 --LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVS 519
L+ C +SPDG + + S D+ + +WD + I L GH +V + ++ S
Sbjct: 273 KNLLKC-SWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGS 331
Query: 520 GSADSTL 526
S+D +
Sbjct: 332 CSSDKNI 338
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 60/266 (22%), Positives = 111/266 (41%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
+ GH A++ + ++ +G + S S D TVR WDV T + K + +VN T+
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKM--AEHSSFVNSCCPTRR 149
Query: 166 LADVLPLDTLN-TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
++ + + T ++ D+ Q+ A+ + P + + +V FS + +
Sbjct: 150 GPPLIISGSDDGTAKLWDM-RQRGAI----------QTFPDKYQ-ITAVSFSDAADKIFT 197
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS---STG 281
G D V+ WD+ EGH+ + ++ SPD L++ + + WD +
Sbjct: 198 GGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQ 257
Query: 282 KQIGQPMRGHK----QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS 337
+ + GH+ + + SW P + + D + IWD + + L
Sbjct: 258 NRCVKIFEGHQHNFEKNLLKCSWSP-----DGTKVTAGSSDRMVHIWDTTSRRTIYKLPG 312
Query: 338 HTRSVT-CIRWGGSGLIYSASQDRTI 362
HT SV C+ +I S S D+ I
Sbjct: 313 HTGSVNECVFHPTEPIIGSCSSDKNI 338
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 64/287 (22%), Positives = 112/287 (39%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-EGTPYLFYVNETEITK 164
+ GH AV ++KF+P G +ASGS D + W V F +G + + + T
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKG--HKNAILDLHWTS 106
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA- 223
+ ++ T D+ KQ M H+ V S + G L
Sbjct: 107 DGSQIVSASPDKTVRAWDVETGKQI-----------KKMAEHSSFVNSCCPTRRGPPLII 155
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
SGS D T + WD+ Q + K+ + +++S + ++ +G + + WD G+
Sbjct: 156 SGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEA 214
Query: 284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS-- 341
+ GH+ IT +S P + +R + ++CV++ H +
Sbjct: 215 T-MTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPY-APQNRCVKIFEGHQHNFE 272
Query: 342 ---VTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
+ C W G + + S DR + +W + L GH VN
Sbjct: 273 KNLLKC-SWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVN 318
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 312 (114.9 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 85/266 (31%), Positives = 131/266 (49%)
Query: 311 RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDG 370
R S D +++W + +C+R L HT V + + +I S S DRT+KVW A G
Sbjct: 313 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-IIISGSTDRTLKVWNAETG 371
Query: 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE 428
TL GH V + L ++ +T +D + H L + A +C +
Sbjct: 372 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRV-WDIETGQ--CLHVLMGHVAAVRCVQ 428
Query: 429 --GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
G ++VSG+ DF + +W+PE E L + GH + ++F DG + S S D SI++
Sbjct: 429 YDGRRVVSGAYDFMVKVWDPETET-CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 485
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
WD G I TL GH Q++ D+ +LVSG+ADST+K+W++KT + Q L G
Sbjct: 486 WDVETGNCIHTLTGH-QSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 543
Query: 547 VYAVDWAPDGEK-VASGGKDKVLRLW 571
AV + V + D ++LW
Sbjct: 544 QSAVTCLQFNKNFVITSSDDGTVKLW 569
Score = 297 (109.6 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 93/339 (27%), Positives = 160/339 (47%)
Query: 203 MPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
+ GH + VI+ ++F G + SGS D T++ W T L GH V WS
Sbjct: 296 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 349
Query: 262 KQ--LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG 319
+ ++SG + + W++ TG+ I + GH + + HL H+ +R S +D
Sbjct: 350 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTVRCM-----HL-HE-KRVVSGSRDA 401
Query: 320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
+R+WD+ QC+ VL H +V C+++ G ++ S + D +KVW TL+GH
Sbjct: 402 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 460
Query: 380 AHWVNTLALSTDYLMRVEA-TSTGGFKYDPANPEESSKHALAKYQAQCPEGEK----LVS 434
+ V +L +++ TS + + N H L +Q+ E LVS
Sbjct: 461 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN----CIHTLTGHQSLTSGMELKDNILVS 516
Query: 435 GSDDFTLFLWNPEKEKKSLARMTG---HQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491
G+ D T+ +W+ K + L + G HQ + C++F+ + + ++S D ++KLWD +
Sbjct: 517 GNADSTVKIWDI-KTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 573
Query: 492 GKFI---TTLR--GHVQAVYMVAWSSDSRLLVSGSADST 525
G+FI TL G V+ + S+ + GS + T
Sbjct: 574 GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 612
Score = 261 (96.9 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 80/305 (26%), Positives = 144/305 (47%)
Query: 246 EGHK-HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304
+GH H + C+ + ++VSG + + W + TGK + + + GH T W
Sbjct: 297 KGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSS-- 347
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
+ S D +++W+ +C+ L HT +V C+ ++ S S+D T++V
Sbjct: 348 -QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRV 405
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE-ESSKHALAK-- 421
W G L GH V + Y R + F +PE E+ H L
Sbjct: 406 WDIETGQCLHVLMGHVAAVRCV----QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 461
Query: 422 ---YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
Y Q +G +VSGS D ++ +W+ E + +TGHQ L + +E + I+ S
Sbjct: 462 NRVYSLQF-DGIHVVSGSLDTSIRVWDVETGN-CIHTLTGHQSLTSGMELKDN--ILVSG 517
Query: 479 SFDKSIKLWDGRIGKFITTLRG---HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
+ D ++K+WD + G+ + TL+G H AV + ++ + +++ S D T+K+W++KT +
Sbjct: 518 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGE 575
Query: 536 IEQDL 540
++L
Sbjct: 576 FIRNL 580
Score = 260 (96.6 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 75/244 (30%), Positives = 123/244 (50%)
Query: 333 RVLTSHTRSV-TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+VL H V TC+++ G+ ++ S S D T+KVW A G RTL GH V + + +
Sbjct: 294 KVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 352
Query: 392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE--GEKLVSGSDDFTLFLWNPE 447
++ T K A E H L + + +C +++VSGS D TL +W+ E
Sbjct: 353 IIISGSTDRT--LKVWNAETGECI-HTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIE 409
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ L + GH + CV++ DGR + S ++D +K+WD + TL+GH VY
Sbjct: 410 TGQ-CLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 466
Query: 508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV 567
+ + D +VSGS D++++VW+++T L GH ++ D V SG D
Sbjct: 467 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME-LKDNILV-SGNADST 522
Query: 568 LRLW 571
+++W
Sbjct: 523 VKIW 526
Score = 58 (25.5 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 106 MPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFWDVTT 141
+ GH + VI+ ++F G + SGS D T++ W T
Sbjct: 296 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVT 330
Score = 37 (18.1 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 121 NGRSLASGS-GDTTVRFWDVTTQTPLFKCEGTPYLF 155
+G + S S G + + T+ T L C TP F
Sbjct: 94 HGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTF 129
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 312 (114.9 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 85/266 (31%), Positives = 131/266 (49%)
Query: 311 RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDG 370
R S D +++W + +C+R L HT V + + +I S S DRT+KVW A G
Sbjct: 315 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-IIISGSTDRTLKVWNAETG 373
Query: 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE 428
TL GH V + L ++ +T +D + H L + A +C +
Sbjct: 374 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRV-WDIETGQ--CLHVLMGHVAAVRCVQ 430
Query: 429 --GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
G ++VSG+ DF + +W+PE E L + GH + ++F DG + S S D SI++
Sbjct: 431 YDGRRVVSGAYDFMVKVWDPETET-CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 487
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
WD G I TL GH Q++ D+ +LVSG+ADST+K+W++KT + Q L G
Sbjct: 488 WDVETGNCIHTLTGH-QSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPSKH 545
Query: 547 VYAVDWAPDGEK-VASGGKDKVLRLW 571
AV + V + D ++LW
Sbjct: 546 QSAVTCLQFNKNFVITSSDDGTVKLW 571
Score = 297 (109.6 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 93/339 (27%), Positives = 160/339 (47%)
Query: 203 MPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
+ GH + VI+ ++F G + SGS D T++ W T L GH V WS
Sbjct: 298 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 351
Query: 262 KQ--LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG 319
+ ++SG + + W++ TG+ I + GH + + HL H+ +R S +D
Sbjct: 352 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTVRCM-----HL-HE-KRVVSGSRDA 403
Query: 320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
+R+WD+ QC+ VL H +V C+++ G ++ S + D +KVW TL+GH
Sbjct: 404 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 462
Query: 380 AHWVNTLALSTDYLMRVEA-TSTGGFKYDPANPEESSKHALAKYQAQCPEGEK----LVS 434
+ V +L +++ TS + + N H L +Q+ E LVS
Sbjct: 463 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN----CIHTLTGHQSLTSGMELKDNILVS 518
Query: 435 GSDDFTLFLWNPEKEKKSLARMTG---HQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491
G+ D T+ +W+ K + L + G HQ + C++F+ + + ++S D ++KLWD +
Sbjct: 519 GNADSTVKIWDI-KTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 575
Query: 492 GKFI---TTLR--GHVQAVYMVAWSSDSRLLVSGSADST 525
G+FI TL G V+ + S+ + GS + T
Sbjct: 576 GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 614
Score = 261 (96.9 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 80/305 (26%), Positives = 144/305 (47%)
Query: 246 EGHK-HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304
+GH H + C+ + ++VSG + + W + TGK + + + GH T W
Sbjct: 299 KGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSS-- 349
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
+ S D +++W+ +C+ L HT +V C+ ++ S S+D T++V
Sbjct: 350 -QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRV 407
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE-ESSKHALAK-- 421
W G L GH V + Y R + F +PE E+ H L
Sbjct: 408 WDIETGQCLHVLMGHVAAVRCV----QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 463
Query: 422 ---YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
Y Q +G +VSGS D ++ +W+ E + +TGHQ L + +E + I+ S
Sbjct: 464 NRVYSLQF-DGIHVVSGSLDTSIRVWDVETGN-CIHTLTGHQSLTSGMELKDN--ILVSG 519
Query: 479 SFDKSIKLWDGRIGKFITTLRG---HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
+ D ++K+WD + G+ + TL+G H AV + ++ + +++ S D T+K+W++KT +
Sbjct: 520 NADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGE 577
Query: 536 IEQDL 540
++L
Sbjct: 578 FIRNL 582
Score = 260 (96.6 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 75/244 (30%), Positives = 123/244 (50%)
Query: 333 RVLTSHTRSV-TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+VL H V TC+++ G+ ++ S S D T+KVW A G RTL GH V + + +
Sbjct: 296 KVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 354
Query: 392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE--GEKLVSGSDDFTLFLWNPE 447
++ T K A E H L + + +C +++VSGS D TL +W+ E
Sbjct: 355 IIISGSTDRT--LKVWNAETGECI-HTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIE 411
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ L + GH + CV++ DGR + S ++D +K+WD + TL+GH VY
Sbjct: 412 TGQ-CLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 468
Query: 508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV 567
+ + D +VSGS D++++VW+++T L GH ++ D V SG D
Sbjct: 469 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME-LKDNILV-SGNADST 524
Query: 568 LRLW 571
+++W
Sbjct: 525 VKIW 528
Score = 58 (25.5 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 106 MPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFWDVTT 141
+ GH + VI+ ++F G + SGS D T++ W T
Sbjct: 298 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVT 332
Score = 41 (19.5 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 121 NGRSLASGS-GDTTVRFWDVTTQTPLFKCEGTPYLF 155
+G + S S G + D T+ T L C TP F
Sbjct: 96 HGSEVRSFSLGKKPCKVSDYTSTTGLVPCSATPTTF 131
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 312 (114.9 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 85/266 (31%), Positives = 131/266 (49%)
Query: 311 RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDG 370
R S D +++W + +C+R L HT V + + +I S S DRT+KVW A G
Sbjct: 393 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-IIISGSTDRTLKVWNAETG 451
Query: 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE 428
TL GH V + L ++ +T +D + H L + A +C +
Sbjct: 452 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRV-WDIETGQ--CLHVLMGHVAAVRCVQ 508
Query: 429 --GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
G ++VSG+ DF + +W+PE E L + GH + ++F DG + S S D SI++
Sbjct: 509 YDGRRVVSGAYDFMVKVWDPETET-CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 565
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
WD G I TL GH Q++ D+ +LVSG+ADST+K+W++KT + Q L G
Sbjct: 566 WDVETGNCIHTLTGH-QSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 623
Query: 547 VYAVDWAPDGEK-VASGGKDKVLRLW 571
AV + V + D ++LW
Sbjct: 624 QSAVTCLQFNKNFVITSSDDGTVKLW 649
Score = 297 (109.6 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 93/339 (27%), Positives = 160/339 (47%)
Query: 203 MPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
+ GH + VI+ ++F G + SGS D T++ W T L GH V WS
Sbjct: 376 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 429
Query: 262 KQ--LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG 319
+ ++SG + + W++ TG+ I + GH + + HL H+ +R S +D
Sbjct: 430 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTVRCM-----HL-HE-KRVVSGSRDA 481
Query: 320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
+R+WD+ QC+ VL H +V C+++ G ++ S + D +KVW TL+GH
Sbjct: 482 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 540
Query: 380 AHWVNTLALSTDYLMRVEA-TSTGGFKYDPANPEESSKHALAKYQAQCPEGEK----LVS 434
+ V +L +++ TS + + N H L +Q+ E LVS
Sbjct: 541 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN----CIHTLTGHQSLTSGMELKDNILVS 596
Query: 435 GSDDFTLFLWNPEKEKKSLARMTG---HQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491
G+ D T+ +W+ K + L + G HQ + C++F+ + + ++S D ++KLWD +
Sbjct: 597 GNADSTVKIWDI-KTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 653
Query: 492 GKFI---TTLR--GHVQAVYMVAWSSDSRLLVSGSADST 525
G+FI TL G V+ + S+ + GS + T
Sbjct: 654 GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 692
Score = 261 (96.9 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 80/305 (26%), Positives = 144/305 (47%)
Query: 246 EGHK-HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304
+GH H + C+ + ++VSG + + W + TGK + + + GH T W
Sbjct: 377 KGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSS-- 427
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
+ S D +++W+ +C+ L HT +V C+ ++ S S+D T++V
Sbjct: 428 -QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRV 485
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE-ESSKHALAK-- 421
W G L GH V + Y R + F +PE E+ H L
Sbjct: 486 WDIETGQCLHVLMGHVAAVRCV----QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 541
Query: 422 ---YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
Y Q +G +VSGS D ++ +W+ E + +TGHQ L + +E + I+ S
Sbjct: 542 NRVYSLQF-DGIHVVSGSLDTSIRVWDVETGN-CIHTLTGHQSLTSGMELKDN--ILVSG 597
Query: 479 SFDKSIKLWDGRIGKFITTLRG---HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
+ D ++K+WD + G+ + TL+G H AV + ++ + +++ S D T+K+W++KT +
Sbjct: 598 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGE 655
Query: 536 IEQDL 540
++L
Sbjct: 656 FIRNL 660
Score = 260 (96.6 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 75/244 (30%), Positives = 123/244 (50%)
Query: 333 RVLTSHTRSV-TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+VL H V TC+++ G+ ++ S S D T+KVW A G RTL GH V + + +
Sbjct: 374 KVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 432
Query: 392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE--GEKLVSGSDDFTLFLWNPE 447
++ T K A E H L + + +C +++VSGS D TL +W+ E
Sbjct: 433 IIISGSTDRT--LKVWNAETGECI-HTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIE 489
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ L + GH + CV++ DGR + S ++D +K+WD + TL+GH VY
Sbjct: 490 TGQ-CLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 546
Query: 508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV 567
+ + D +VSGS D++++VW+++T L GH ++ D V SG D
Sbjct: 547 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME-LKDNILV-SGNADST 602
Query: 568 LRLW 571
+++W
Sbjct: 603 VKIW 606
Score = 58 (25.5 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 106 MPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFWDVTT 141
+ GH + VI+ ++F G + SGS D T++ W T
Sbjct: 376 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVT 410
Score = 37 (18.1 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 121 NGRSLASGS-GDTTVRFWDVTTQTPLFKCEGTPYLF 155
+G + S S G + + T+ T L C TP F
Sbjct: 174 HGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTF 209
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 312 (114.9 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 85/266 (31%), Positives = 131/266 (49%)
Query: 311 RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDG 370
R S D +++W + +C+R L HT V + + +I S S DRT+KVW A G
Sbjct: 398 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-IIISGSTDRTLKVWNAETG 456
Query: 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE 428
TL GH V + L ++ +T +D + H L + A +C +
Sbjct: 457 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRV-WDIETGQ--CLHVLMGHVAAVRCVQ 513
Query: 429 --GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
G ++VSG+ DF + +W+PE E L + GH + ++F DG + S S D SI++
Sbjct: 514 YDGRRVVSGAYDFMVKVWDPETET-CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 570
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
WD G I TL GH Q++ D+ +LVSG+ADST+K+W++KT + Q L G
Sbjct: 571 WDVETGNCIHTLTGH-QSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 628
Query: 547 VYAVDWAPDGEK-VASGGKDKVLRLW 571
AV + V + D ++LW
Sbjct: 629 QSAVTCLQFNKNFVITSSDDGTVKLW 654
Score = 297 (109.6 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 93/339 (27%), Positives = 160/339 (47%)
Query: 203 MPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
+ GH + VI+ ++F G + SGS D T++ W T L GH V WS
Sbjct: 381 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 434
Query: 262 KQ--LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG 319
+ ++SG + + W++ TG+ I + GH + + HL H+ +R S +D
Sbjct: 435 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTVRCM-----HL-HE-KRVVSGSRDA 486
Query: 320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
+R+WD+ QC+ VL H +V C+++ G ++ S + D +KVW TL+GH
Sbjct: 487 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 545
Query: 380 AHWVNTLALSTDYLMRVEA-TSTGGFKYDPANPEESSKHALAKYQAQCPEGEK----LVS 434
+ V +L +++ TS + + N H L +Q+ E LVS
Sbjct: 546 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN----CIHTLTGHQSLTSGMELKDNILVS 601
Query: 435 GSDDFTLFLWNPEKEKKSLARMTG---HQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491
G+ D T+ +W+ K + L + G HQ + C++F+ + + ++S D ++KLWD +
Sbjct: 602 GNADSTVKIWDI-KTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 658
Query: 492 GKFI---TTLR--GHVQAVYMVAWSSDSRLLVSGSADST 525
G+FI TL G V+ + S+ + GS + T
Sbjct: 659 GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 697
Score = 261 (96.9 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 80/305 (26%), Positives = 144/305 (47%)
Query: 246 EGHK-HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304
+GH H + C+ + ++VSG + + W + TGK + + + GH T W
Sbjct: 382 KGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSS-- 432
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
+ S D +++W+ +C+ L HT +V C+ ++ S S+D T++V
Sbjct: 433 -QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRV 490
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE-ESSKHALAK-- 421
W G L GH V + Y R + F +PE E+ H L
Sbjct: 491 WDIETGQCLHVLMGHVAAVRCV----QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 546
Query: 422 ---YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
Y Q +G +VSGS D ++ +W+ E + +TGHQ L + +E + I+ S
Sbjct: 547 NRVYSLQF-DGIHVVSGSLDTSIRVWDVETGN-CIHTLTGHQSLTSGMELKDN--ILVSG 602
Query: 479 SFDKSIKLWDGRIGKFITTLRG---HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
+ D ++K+WD + G+ + TL+G H AV + ++ + +++ S D T+K+W++KT +
Sbjct: 603 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGE 660
Query: 536 IEQDL 540
++L
Sbjct: 661 FIRNL 665
Score = 260 (96.6 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 75/244 (30%), Positives = 123/244 (50%)
Query: 333 RVLTSHTRSV-TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+VL H V TC+++ G+ ++ S S D T+KVW A G RTL GH V + + +
Sbjct: 379 KVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 437
Query: 392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE--GEKLVSGSDDFTLFLWNPE 447
++ T K A E H L + + +C +++VSGS D TL +W+ E
Sbjct: 438 IIISGSTDRT--LKVWNAETGECI-HTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIE 494
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ L + GH + CV++ DGR + S ++D +K+WD + TL+GH VY
Sbjct: 495 TGQ-CLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 551
Query: 508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV 567
+ + D +VSGS D++++VW+++T L GH ++ D V SG D
Sbjct: 552 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME-LKDNILV-SGNADST 607
Query: 568 LRLW 571
+++W
Sbjct: 608 VKIW 611
Score = 58 (25.5 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 106 MPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFWDVTT 141
+ GH + VI+ ++F G + SGS D T++ W T
Sbjct: 381 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVT 415
Score = 37 (18.1 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 121 NGRSLASGS-GDTTVRFWDVTTQTPLFKCEGTPYLF 155
+G + S S G + + T+ T L C TP F
Sbjct: 179 HGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTF 214
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 317 (116.6 bits), Expect = 3.9e-26, P = 3.9e-26
Identities = 92/298 (30%), Positives = 142/298 (47%)
Query: 94 FQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPY 153
FQ PV GH A+ SV FSP+G+ LA+ S DT + W+ Q F+
Sbjct: 4 FQEDPVLE--RYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFR------ 55
Query: 154 LFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS-MPGHAEAVIS 212
YV ++ T PL L D + V P R SS H V S
Sbjct: 56 --YVGHKDVV-TSVQFSPLGNLLASASRD-----RTVRLWIPDKRGKSSEFKAHTAPVRS 107
Query: 213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV 272
V FS +G+ LA+ S D +++ W++ Q L+ H HWV C +SPD + +VS ++
Sbjct: 108 VDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
I WD+ T KQ + + ++ F+ N C AS+G D ++IWD+ +++ +
Sbjct: 168 IKIWDT-TNKQC---VNNFSDSVGFANFVDFNPNGTC--IASAGSDHTVKIWDIRVNKLL 221
Query: 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
+ H+ V C+ + SG I +AS D T+K+ +G + TL+GH V T++ S
Sbjct: 222 QHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 279
Score = 270 (100.1 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 74/291 (25%), Positives = 138/291 (47%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
+GHK IT++ + P ++ A++ D + +W+ H VT +++
Sbjct: 15 KGHKAAITSVDFSP-----SGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFS 69
Query: 349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
G L+ SAS+DRT+++W + H V ++ S D A+ K
Sbjct: 70 PLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 408 PANPEESSKHALAKYQ--AQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
+ ++L ++ +C P+G +VS S+D T+ +W+ K+ + +
Sbjct: 130 NMY-RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN-KQCVNNFSDSVG 187
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
N V+F+P+G IASA D ++K+WD R+ K + + H V V++ +++ S
Sbjct: 188 FANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITAS 247
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
+D TLK+ ++ ++ L GH V+ V ++ GE +SGG D + LW+
Sbjct: 248 SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWR 298
Score = 246 (91.7 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 56/171 (32%), Positives = 91/171 (53%)
Query: 404 FKYDPANPEESSKHALAKYQAQ-CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL 462
F+ DP H A P G++L + S D L LWN + + ++ R GH+ +
Sbjct: 4 FQEDPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAF-RYVGHKDV 62
Query: 463 INCVEFSPDGRIIASASFDKSIKLW--DGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSG 520
+ V+FSP G ++ASAS D++++LW D R GK + + H V V +S+D + L +
Sbjct: 63 VTSVQFSPLGNLLASASRDRTVRLWIPDKR-GKS-SEFKAHTAPVRSVDFSADGQFLATA 120
Query: 521 SADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
S D ++KVWNM ++ L H V ++PDG + S +DK +++W
Sbjct: 121 SEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 310 (114.2 bits), Expect = 6.7e-26, Sum P(2) = 6.7e-26
Identities = 85/266 (31%), Positives = 131/266 (49%)
Query: 311 RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDG 370
R S D +++W + +C+R L HT V + + +I S S DRT+KVW A G
Sbjct: 446 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-IIISGSTDRTLKVWNAETG 504
Query: 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE 428
TL GH V + L ++ +T +D + H L + A +C +
Sbjct: 505 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRV-WDIETGQ--CLHVLMGHVAAVRCVQ 561
Query: 429 --GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
G ++VSG+ DF + +W+PE E L + GH + ++F DG + S S D SI++
Sbjct: 562 YDGRRVVSGAYDFMVKVWDPETET-CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 618
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
WD G I TL GH Q++ D+ +LVSG+ADST+K+W++KT + Q L G
Sbjct: 619 WDVETGNCIHTLTGH-QSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPHKH 676
Query: 547 VYAVDWAPDGEK-VASGGKDKVLRLW 571
AV + V + D ++LW
Sbjct: 677 QSAVTCLQFNKNFVITSSDDGTVKLW 702
Score = 300 (110.7 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 94/339 (27%), Positives = 160/339 (47%)
Query: 203 MPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
+ GH + VI+ ++F G + SGS D T++ W T L GH V WS
Sbjct: 429 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 482
Query: 262 KQ--LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG 319
+ ++SG + + W++ TG+ I + GH + + HL H+ +R S +D
Sbjct: 483 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTVRCM-----HL-HE-KRVVSGSRDA 534
Query: 320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
+R+WD+ QC+ VL H +V C+++ G ++ S + D +KVW TL+GH
Sbjct: 535 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 593
Query: 380 AHWVNTLALSTDYLMRVEA-TSTGGFKYDPANPEESSKHALAKYQAQCPEGEK----LVS 434
+ V +L +++ TS + + N H L +Q+ E LVS
Sbjct: 594 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN----CIHTLTGHQSLTSGMELKDNILVS 649
Query: 435 GSDDFTLFLWNPEKEKKSLARMTG---HQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491
G+ D T+ +W+ K + L + G HQ + C++F+ + + ++S D ++KLWD R
Sbjct: 650 GNADSTVKIWDI-KTGQCLQTLQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLRT 706
Query: 492 GKFI---TTLR--GHVQAVYMVAWSSDSRLLVSGSADST 525
G+FI TL G V+ + S+ + GS + T
Sbjct: 707 GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 745
Score = 260 (96.6 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 75/244 (30%), Positives = 123/244 (50%)
Query: 333 RVLTSHTRSV-TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+VL H V TC+++ G+ ++ S S D T+KVW A G RTL GH V + + +
Sbjct: 427 KVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 485
Query: 392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE--GEKLVSGSDDFTLFLWNPE 447
++ T K A E H L + + +C +++VSGS D TL +W+ E
Sbjct: 486 IIISGSTDRT--LKVWNAETGECI-HTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIE 542
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ L + GH + CV++ DGR + S ++D +K+WD + TL+GH VY
Sbjct: 543 TGQ-CLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 599
Query: 508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV 567
+ + D +VSGS D++++VW+++T L GH ++ D V SG D
Sbjct: 600 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME-LKDNILV-SGNADST 655
Query: 568 LRLW 571
+++W
Sbjct: 656 VKIW 659
Score = 260 (96.6 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 84/323 (26%), Positives = 151/323 (46%)
Query: 228 DTTVRFWDVTTQTPLFKCEGHK-HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ 286
DT R D+ + L +GH H + C+ + ++VSG + + W + TGK + +
Sbjct: 415 DTNWRRGDLKSPKVL---KGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-R 468
Query: 287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH T W + S D +++W+ +C+ L HT +V C+
Sbjct: 469 TLVGH----TGGVWSS---QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH 521
Query: 347 WGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKY 406
++ S S+D T++VW G L GH V + Y R + F
Sbjct: 522 LHEKRVV-SGSRDATLRVWDIETGQCLHVLMGHVAAVRCV----QYDGRRVVSGAYDFMV 576
Query: 407 DPANPE-ESSKHALAK-----YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ 460
+PE E+ H L Y Q +G +VSGS D ++ +W+ E + +TGHQ
Sbjct: 577 KVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGN-CIHTLTGHQ 634
Query: 461 QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG---HVQAVYMVAWSSDSRLL 517
L + +E + I+ S + D ++K+WD + G+ + TL+G H AV + ++ + +
Sbjct: 635 SLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN--FV 690
Query: 518 VSGSADSTLKVWNMKTKKIEQDL 540
++ S D T+K+W+++T + ++L
Sbjct: 691 ITSSDDGTVKLWDLRTGEFIRNL 713
Score = 58 (25.5 bits), Expect = 6.7e-26, Sum P(2) = 6.7e-26
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 106 MPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFWDVTT 141
+ GH + VI+ ++F G + SGS D T++ W T
Sbjct: 429 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVT 463
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 309 (113.8 bits), Expect = 7.0e-26, Sum P(2) = 7.0e-26
Identities = 82/266 (30%), Positives = 131/266 (49%)
Query: 311 RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDG 370
R S D +++W + +C+R L HT V + G+ +I S S DRT+KVW G
Sbjct: 1007 RIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGN-IIISGSTDRTLKVWDMDSG 1065
Query: 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE 428
TL+GH V + L ++ +T +D + S H L + A +C +
Sbjct: 1066 ACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRV-WDIE--QGSCLHVLVGHLAAVRCVQ 1122
Query: 429 --GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
G+ +VSG+ D+ + +W+PE+++ L + GH + ++F DG + S S D SI++
Sbjct: 1123 YDGKLIVSGAYDYMVKIWHPERQE-CLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRV 1179
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
WD G TL GH Q++ +LVSG+ADST+KVW++ T + Q L G
Sbjct: 1180 WDVETGNCKHTLMGH-QSLTS-GMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKH 1237
Query: 547 VYAVDWAPDGEK-VASGGKDKVLRLW 571
AV + V + D ++LW
Sbjct: 1238 HSAVTCLQFNSRFVVTSSDDGTVKLW 1263
Score = 295 (108.9 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 95/361 (26%), Positives = 168/361 (46%)
Query: 185 YQKQAVFQV----RPVTRCTSSMPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFWDVTTQ 239
Y +Q + ++ RPV R + GH + VI+ ++FS G + SGS D T++ W
Sbjct: 969 YMRQHIIEMNWRSRPV-RKPKVLKGHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNG 1025
Query: 240 TPLFKCEGHKHWVLCIAWSPDSKQ--LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITA 297
L GH V WS ++SG + + WD +G + ++GH +
Sbjct: 1026 KCLRTLVGHTGGV----WSSQMSGNIIISGSTDRTLKVWDMDSGACV-HTLQGHTSTVRC 1080
Query: 298 LSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSAS 357
+ HL+ + S +D +R+WD+ C+ VL H +V C+++ G LI S +
Sbjct: 1081 M-----HLHGS--KVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGK-LIVSGA 1132
Query: 358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA-TSTGGFKYDPANPEESSK 416
D +K+W TL+GH + V +L +++ TS + + N K
Sbjct: 1133 YDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGN----CK 1188
Query: 417 HALAKYQAQCPEGEK----LVSGSDDFTLFLWNPEKEK--KSLARMTGHQQLINCVEFSP 470
H L +Q+ E LVSG+ D T+ +W+ + ++L+ H + C++F+
Sbjct: 1189 HTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFN- 1247
Query: 471 DGRIIASASFDKSIKLWDGRIGKFITTL-----RGHVQAVYMVAWSSDSRLLVS-GSADS 524
R + ++S D ++KLWD + G FI L G V+ + ++D++L+ + GS +
Sbjct: 1248 -SRFVVTSSDDGTVKLWDVKTGDFIRNLVALDSGGSGGVVWRIR-ANDTKLICAVGSRNG 1305
Query: 525 T 525
T
Sbjct: 1306 T 1306
Score = 261 (96.9 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 84/296 (28%), Positives = 137/296 (46%)
Query: 246 EGHK-HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304
+GH H + C+ +S ++VSG + + W + GK + + + GH T W
Sbjct: 991 KGHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCL-RTLVGH----TGGVWSS-Q 1042
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
++ S D +++WD+ CV L HT +V C+ GS ++ S S+D T++V
Sbjct: 1043 MSGNI--IISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVV-SGSRDATLRV 1099
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE---ESSKHALA 420
W G L GH V + D + V K + P E H
Sbjct: 1100 WDIEQGSCLHVLVGHLAAVR--CVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNR 1157
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
Y Q +G +VSGS D ++ +W+ E M GHQ L + +E + I+ S +
Sbjct: 1158 VYSLQF-DGLHVVSGSLDTSIRVWDVETGNCKHTLM-GHQSLTSGMELRQN--ILVSGNA 1213
Query: 481 DKSIKLWDGRIGKFITTLRG---HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
D ++K+WD G+ + TL G H AV + ++S R +V+ S D T+K+W++KT
Sbjct: 1214 DSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNS--RFVVTSSDDGTVKLWDVKT 1267
Score = 199 (75.1 bits), Expect = 6.8e-12, Sum P(3) = 6.8e-12
Identities = 58/212 (27%), Positives = 101/212 (47%)
Query: 365 WRASDGVMCRTLEGHA-HWVNTLALSTDYLMRVEATSTGGFK-YDPANPE---ESSKHAL 419
WR+ + L+GH H + L S + + V + K + N + H
Sbjct: 979 WRSRPVRKPKVLKGHDDHVITCLQFSGNRI--VSGSDDNTLKVWSAVNGKCLRTLVGHTG 1036
Query: 420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
+ +Q G ++SGS D TL +W+ + + + GH + C+ G + S S
Sbjct: 1037 GVWSSQM-SGNIIISGSTDRTLKVWDMDSGA-CVHTLQGHTSTVRCMHLH--GSKVVSGS 1092
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD 539
D ++++WD G + L GH+ AV V + D +L+VSG+ D +K+W+ + ++
Sbjct: 1093 RDATLRVWDIEQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHT 1150
Query: 540 LPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
L GH + VY++ + DG V SG D +R+W
Sbjct: 1151 LQGHTNRVYSLQF--DGLHVVSGSLDTSIRVW 1180
Score = 67 (28.6 bits), Expect = 7.0e-26, Sum P(2) = 7.0e-26
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 88 YQKQAVFQV----RPVTRCTSSMPGHAEAVIS-VKFSPNGRSLASGSGDTTVRFW 137
Y +Q + ++ RPV R + GH + VI+ ++FS G + SGS D T++ W
Sbjct: 969 YMRQHIIEMNWRSRPV-RKPKVLKGHDDHVITCLQFS--GNRIVSGSDDNTLKVW 1020
Score = 50 (22.7 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 26/125 (20%), Positives = 46/125 (36%)
Query: 18 KSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTLADVLPLDT 77
+ DDG L D ++V + +SL N++ E T +
Sbjct: 290 EGDDGATCFSLHDRLMSVRLKQMSLTANTVSNPSPAASANAAAPEEASTSNSSSTSSSAL 349
Query: 78 LNTE-EVVDIVYQKQAVFQVR---PVTRCTSSMPGHAEAVIS-VKFSPNGRSLASGSGDT 132
+ E +D++ ++ + R + TSSM + +S +K G A+GSG
Sbjct: 350 SRADIESMDLIERRDFETEQRLTGGIILRTSSMVSQNKLNLSLIKSMAGGSKAANGSGTA 409
Query: 133 TVRFW 137
W
Sbjct: 410 NSDDW 414
Score = 44 (20.5 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 189 AVFQVRPVTRCTSSMPGHA 207
AV V P + TSS PG A
Sbjct: 808 AVLSVTPSSHLTSSTPGSA 826
Score = 44 (20.5 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 92 AVFQVRPVTRCTSSMPGHA 110
AV V P + TSS PG A
Sbjct: 808 AVLSVTPSSHLTSSTPGSA 826
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 298 (110.0 bits), Expect = 9.9e-26, P = 9.9e-26
Identities = 77/292 (26%), Positives = 140/292 (47%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
+GH+ +T + F LN + AS D + IW + T H +VTC+ +
Sbjct: 16 KGHRDAVTCVD---FSLN--TKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
SG L+ S S+D+T+++W + H V ++ +D + V A+ K
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVW 130
Query: 408 PANPEESSKHALAKY--QAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
+ + +L ++ +C P+G +VS SDD T+ LW+ + ++ + H
Sbjct: 131 STH-RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGG 188
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
+ V+F P G IA+A D ++K+WD R + + + H AV +++ L++ S
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITAS 248
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
+DSTLK+ ++ ++ L GH V ++ GE ASGG D+ + +W++
Sbjct: 249 SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 276 (102.2 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 77/291 (26%), Positives = 129/291 (44%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF-H 304
+GH+ V C+ +S ++K L SG + + W + + GHK +T +++ P H
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYR-FTGHKDAVTCVNFSPSGH 74
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIK 363
L AS +D +RIW + V +HT +V + + G L+ +AS D+T+K
Sbjct: 75 L------LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVK 128
Query: 364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE---ESSKHA- 418
VW +L H +WV S D + V A+ K +D + E +H
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
Y P G + + D T+ +W+ + + + H +N + F P G + +A
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDT-RTHRLVQHYQLHSAAVNALSFHPSGNYLITA 247
Query: 479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
S D ++K+ D G+ + TL GH VA+S SG +D + VW
Sbjct: 248 SSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 253 (94.1 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 75/289 (25%), Positives = 120/289 (41%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH +AV V FS N + LASGS D+T+ W + Q+ ++ GHK V C+ +SP L
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
SG ++ + W + K R H + ++ H + ++ D +++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRSV-----HFCSDGQLLVTASDDKTVKVW 130
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
+ + LT H V C ++ G LI SAS D+T+K+W + + H +V
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 384 NTLALSTDYLMRVEATSTGGFKYDPANPEESSKH-----ALAKYQAQCPEGEKLVSGSDD 438
+ A K +H A + P G L++ S D
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSD 250
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
TL + + E + L + GHQ V FS G AS D+ + +W
Sbjct: 251 STLKILDL-MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 249 (92.7 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 66/244 (27%), Positives = 114/244 (46%)
Query: 333 RVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS-T 390
R H +VTC+ + + + S S D T+ +W GH V + S +
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 391 DYLMRVEATSTGGFKYDPANPEESS---KH-ALAKYQAQCPEGEKLVSGSDDFTLFLWNP 446
+L+ + + P ES+ H A + C +G+ LV+ SDD T+ +W+
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWST 132
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
+++ L +T H + C +FSPDGR+I SAS DK++KLWD + + + H V
Sbjct: 133 HRQR-FLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 191
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
V + + + D+T+KVW+ +T ++ Q H V A+ + P G + + D
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDS 251
Query: 567 VLRL 570
L++
Sbjct: 252 TLKI 255
Score = 241 (89.9 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 79/297 (26%), Positives = 137/297 (46%)
Query: 77 TLNTEEVVD-IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVR 135
+LNT+ + + ++ ++P +R GH +AV V FSP+G LASGS D TVR
Sbjct: 28 SLNTKHLASGSMDSTLMIWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVR 86
Query: 136 FWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQV 193
W P K E T + + +D L T + ++ V + ++++ +F
Sbjct: 87 IW-----VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLF-- 139
Query: 194 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-CEGHKHWV 252
S+ H V KFSP+GR + S S D TV+ WD T++ + CE H +V
Sbjct: 140 --------SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-HGGFV 190
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
+ + P + + + + WD+ T + + Q + H + ALS+ P N+
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLV-QHYQLHSAAVNALSFHPSG-NYLIT-- 246
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRAS 368
ASS D ++I D++ + + L H T + + +G + S D + VW+++
Sbjct: 247 ASS--DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 181 (68.8 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 55/195 (28%), Positives = 85/195 (43%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH +AV V FS N + LASGS D+T+ W + Q+ ++ G ++ +T
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTG-------HKDAVT--CV 67
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
+ P L D K V V ++ H V SV F +G+ L + S
Sbjct: 68 NFSPSGHLLASGSRD----KTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASD 123
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
D TV+ W Q LF H +WV C +SPD + +VS + + WD T ++
Sbjct: 124 DKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK-TSRECVHS 182
Query: 288 MRGHKQWITALSWEP 302
H ++T + + P
Sbjct: 183 YCEHGGFVTYVDFHP 197
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 238 (88.8 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 61/203 (30%), Positives = 92/203 (45%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH ++V + F +G+ LAS S D T++ WD + GH H V +A P+
Sbjct: 80 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 139
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+VS ++ I W+ TG + + GH++W+ + P N AS D +
Sbjct: 140 DHIVSASRDKTIKMWEVQTGYCV-KTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 193
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWG------------GS-----G----LIYSASQDR 360
R+W V +C L H V CI W GS G + S S+D+
Sbjct: 194 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 253
Query: 361 TIKVWRASDGVMCRTLEGHAHWV 383
TIK+W S G+ TL GH +WV
Sbjct: 254 TIKMWDVSTGMCLMTLVGHDNWV 276
Score = 227 (85.0 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 58/205 (28%), Positives = 93/205 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C +M GH V SV PNG + S S D T++ W+V T + GH+ WV + +
Sbjct: 119 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 178
Query: 259 PDSKQLVSGCKNG-VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH--------LNHQC 309
D L++ C N + W +T K+ +R H+ + +SW P +
Sbjct: 179 QDGT-LIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSET 236
Query: 310 RR------FASSG-KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
++ F SG +D I++WDV C+ L H V + + G I S + D+T
Sbjct: 237 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 296
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTL 386
++VW + +TL H H+V +L
Sbjct: 297 LRVWDYKNKRCMKTLNAHEHFVTSL 321
Score = 222 (83.2 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 77/284 (27%), Positives = 131/284 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH ++V + F +G+ LAS S D T++ WD F+C T + N + +
Sbjct: 80 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGHDHNVSSVA- 134
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
++P N + +V K +++V+ C + GH E V V+ + +G +A
Sbjct: 135 ----IMP----NGDHIVSASRDKTIKMWEVQ-TGYCVKTFTGHREWVRMVRPNQDGTLIA 185
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S S D TVR W V T+ + H+H V CI+W+P+S + + A S T K+
Sbjct: 186 SCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY------SSISEATGSET-KK 238
Query: 284 IGQP----MRGH-----KQW--------ITAL---SWEPFHLNHQCRRFA-SSGKDGAIR 322
G+P + G K W +T + +W L H +F S D +R
Sbjct: 239 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 298
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
+WD +C++ L +H VT + + + + + S D+T+KVW
Sbjct: 299 VWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
Score = 214 (80.4 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 42/129 (32%), Positives = 73/129 (56%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W P +K ++GH+ + V F P ++ SAS D +IK+WD G F TL+GH
Sbjct: 29 WIPRPPEKYA--LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 86
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+V +++ +LL S SAD T+K+W+ + + + + GH V +V P+G+ + S
Sbjct: 87 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 146
Query: 564 KDKVLRLWQ 572
+DK +++W+
Sbjct: 147 RDKTIKMWE 155
Score = 213 (80.0 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 397 EATSTG--GFKYDPAN--PEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNP 446
E TS G G K DP P K+AL+ +++ P +VS S+D T+ +W
Sbjct: 13 EFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW-- 70
Query: 447 EKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ E R + GH + + F G+++AS S D +IKLWD + + I T+ GH V
Sbjct: 71 DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 130
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
VA + +VS S D T+K+W ++T + GH + V V DG +AS D
Sbjct: 131 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 190
Query: 566 KVLRLW 571
+ +R+W
Sbjct: 191 QTVRVW 196
Score = 208 (78.3 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 57/185 (30%), Positives = 90/185 (48%)
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFK---YDPANPEESSK-HALAKYQAQCPE-GE 430
L GH V + + + V A+ K Y+ + E + K H + G+
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
L S S D T+ LW+ + + + M GH ++ V P+G I SAS DK+IK+W+ +
Sbjct: 99 LLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 157
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
G + T GH + V MV + D L+ S S D T++VW + TK+ + +L H V +
Sbjct: 158 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 217
Query: 551 DWAPD 555
WAP+
Sbjct: 218 SWAPE 222
Score = 190 (71.9 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 58/203 (28%), Positives = 90/203 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH V V F P + S S D T++ WD T +GH V I++
Sbjct: 38 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 97
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L S + I WD G + + M GH +++++ P + +H S+ +D I
Sbjct: 98 KLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP-NGDH----IVSASRDKTI 151
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++W+V CV+ T H V +R G LI S S D+T++VW + L H
Sbjct: 152 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 211
Query: 381 HWVNTL--ALSTDYLMRVEATST 401
H V + A + Y EAT +
Sbjct: 212 HVVECISWAPESSYSSISEATGS 234
Score = 186 (70.5 bits), Expect = 3.2e-25, Sum P(2) = 3.2e-25
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
+ GH+ V + + P +VS ++ I WD TG + ++GH + +S++
Sbjct: 37 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 94
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
H + AS D I++WD +C+R + H +V+ + +G I SAS+D+T
Sbjct: 95 ----HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 150
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
IK+W G +T GH WV + + D
Sbjct: 151 IKMWEVQTGYCVKTFTGHREWVRMVRPNQD 180
Score = 186 (70.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 59/237 (24%), Positives = 104/237 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C +M GH V SV PNG + S S D T++ W+V T C T + +
Sbjct: 119 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----CVKT-FTGHREWVR 173
Query: 162 ITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRP---VTRCTSSMPGHAEAVISV--- 213
+ + D + + + ++ V + V K+ ++R V C S P + + IS
Sbjct: 174 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 233
Query: 214 ----KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
K G L SGS D T++ WDV+T L GH +WV + + K ++S
Sbjct: 234 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 293
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWD 325
+ + WD K+ + + H+ ++T+L + H+ + +G D +++W+
Sbjct: 294 DKTLRVWDYKN-KRCMKTLNAHEHFVTSLDF------HKTAPYVVTGSVDQTVKVWE 343
Score = 172 (65.6 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 53/187 (28%), Positives = 88/187 (47%)
Query: 335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL--STD 391
L+ H VT + + ++ SAS+D TIKVW G RTL+GH V ++ S
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 392 YLMRVEATST---GGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L A T F+ ++ H ++ A P G+ +VS S D T+ +W +
Sbjct: 99 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV-AIMPNGDHIVSASRDKTIKMWEVQ 157
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ TGH++ + V + DG +IAS S D+++++W + LR H V
Sbjct: 158 TGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 216
Query: 508 VAWSSDS 514
++W+ +S
Sbjct: 217 ISWAPES 223
Score = 171 (65.3 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W PE S++ TG + + G + S S DK+IK+WD G + TL GH
Sbjct: 219 WAPESSYSSISEATGSETK----KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 274
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V V + S + ++S + D TL+VW+ K K+ + L H V ++D+ V +G
Sbjct: 275 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 334
Query: 564 KDKVLRLWQ 572
D+ +++W+
Sbjct: 335 VDQTVKVWE 343
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 56/218 (25%), Positives = 104/218 (47%)
Query: 288 MRGHKQWITALSWEP-FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH+ +T + + P F + S+ +D I++WD R L HT SV I
Sbjct: 39 LSGHRSPVTRVIFHPVFSV------MVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS 92
Query: 347 WGGSG-LIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLAL--STDYLMRVEATST- 401
+ SG L+ S S D TIK+W G C RT+ GH H V+++A+ + D+++ T
Sbjct: 93 FDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 151
Query: 402 GGFKYDPANPEES-SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
++ ++ + H + +G + S S+D T+ +W K+ A + H
Sbjct: 152 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKAELREH 210
Query: 460 QQLINCVEFSPDGRI--IASASFDKSIKLWDGRIGKFI 495
+ ++ C+ ++P+ I+ A+ ++ K G+ G F+
Sbjct: 211 EHVVECISWAPESSYSSISEATGSETKK--SGKPGPFL 246
Score = 144 (55.7 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L+SGS D T+ +W+ L + GH + V F G+ I S + DK++++WD
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 301
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
+ + + TL H V + + + +V+GS D T+KVW +
Sbjct: 302 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 63 (27.2 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
++ GH V V F P + S S D T++ WD T
Sbjct: 38 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET 74
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 235 (87.8 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 60/203 (29%), Positives = 92/203 (45%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH ++V + F G+ LAS S D T++ WD + GH H V +A P+
Sbjct: 145 TLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+VS ++ + W+ +TG + + GH++W+ + P N AS D +
Sbjct: 205 DHIVSASRDKTMKMWEVATGYCV-KTFTGHREWVRMV--RP---NQDGTLLASCSNDQTV 258
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWG------------GS-----G----LIYSASQDR 360
R+W V +C L H V CI W GS G + S S+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDK 318
Query: 361 TIKVWRASDGVMCRTLEGHAHWV 383
TIK+W S G+ TL GH +WV
Sbjct: 319 TIKMWDISTGMCLMTLVGHDNWV 341
Score = 233 (87.1 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 76/276 (27%), Positives = 120/276 (43%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH ++V + F G+ LAS S D T++ WD F+C T + N + +
Sbjct: 145 TLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQG----FECIRTMHGHDHNVSSVA- 199
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
++P N + +V K C + GH E V V+ + +G LAS
Sbjct: 200 ----IMP----NGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLAS 251
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
S D TVR W V T+ + H+H V CI+W+P+S G + G +
Sbjct: 252 CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFL 311
Query: 285 --GQPMRGHKQW--------ITAL---SWEPFHLNHQCRRFA-SSGKDGAIRIWDVILSQ 330
G + K W +T + +W L H RF S D +RIWD +
Sbjct: 312 LSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKR 371
Query: 331 CVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVW 365
C++ L++H VT + + S + + S D+T+KVW
Sbjct: 372 CMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 221 (82.9 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 58/205 (28%), Positives = 93/205 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C +M GH V SV PNG + S S D T++ W+V T + GH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPN 243
Query: 259 PDSKQLVSGCKNG-VIHAWDSSTGKQIGQPMRGHKQWITALSWEP--FHL---------N 306
D L S C N + W +T K+ +R H+ + +SW P H N
Sbjct: 244 QDGTLLAS-CSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESAHPTISEATGSEN 301
Query: 307 HQCRR---FASSG-KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
+ + F SG +D I++WD+ C+ L H V + + G + S + D+T
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKT 361
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTL 386
+++W + +TL H H+V +L
Sbjct: 362 LRIWDYKNKRCMKTLSAHEHFVTSL 386
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 42/129 (32%), Positives = 73/129 (56%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W P +K ++GH+ + V F P ++ SAS D +IK+WD G F TL+GH
Sbjct: 94 WIPRPPEKYA--LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTD 151
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+V +++ +LL S SAD T+K+W+ + + + + GH V +V P+G+ + S
Sbjct: 152 SVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 564 KDKVLRLWQ 572
+DK +++W+
Sbjct: 212 RDKTMKMWE 220
Score = 208 (78.3 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 57/185 (30%), Positives = 90/185 (48%)
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFK---YDPANPEESSK-HALAKYQAQCPE-GE 430
L GH V + + + V A+ K Y+ + E + K H + + G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
L S S D T+ LW+ + + + M GH ++ V P+G I SAS DK++K+W+
Sbjct: 164 LLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVA 222
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
G + T GH + V MV + D LL S S D T++VW + TK+ + +L H V +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 551 DWAPD 555
WAP+
Sbjct: 283 SWAPE 287
Score = 204 (76.9 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 56/178 (31%), Positives = 87/178 (48%)
Query: 403 GFKYDPAN--PEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
G K DP P K+AL+ +++ P +VS S+D T+ +W + E
Sbjct: 86 GQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVW--DYEAGDFE 143
Query: 455 R-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD 513
R + GH + + F G+++AS S D +IKLWD + + I T+ GH V VA +
Sbjct: 144 RTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+VS S D T+K+W + T + GH + V V DG +AS D+ +R+W
Sbjct: 204 GDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 199 (75.1 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 62/237 (26%), Positives = 106/237 (44%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C +M GH V SV PNG + S S D T++ W+V T C T + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGY----CVKT-FTGHREWVR 238
Query: 162 ITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRP---VTRCTSSMPGHAEAVIS-VKF 215
+ + D L + + ++ V + V K+ ++R V C S P A IS
Sbjct: 239 MVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATG 298
Query: 216 SPNGRS------LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
S N +S L SGS D T++ WD++T L GH +WV + + P + +VS
Sbjct: 299 SENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCAD 358
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWD 325
+ + WD K+ + + H+ ++T+L + H+ + +G D +++W+
Sbjct: 359 DKTLRIWDYKN-KRCMKTLSAHEHFVTSLDF------HKASPYVVTGSVDQTVKVWE 408
Score = 180 (68.4 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 52/202 (25%), Positives = 89/202 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH V V F P + S S D T++ WD +GH V I++
Sbjct: 103 ALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTG 162
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L S + I WD G + + M GH +++++ P + +H S+ +D +
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP-NGDH----IVSASRDKTM 216
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++W+V CV+ T H V +R G L+ S S D+T++VW + L H
Sbjct: 217 KMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHE 276
Query: 381 HWVNTLALSTDYLMRVEATSTG 402
H V ++ + + + +TG
Sbjct: 277 HVVECISWAPESAHPTISEATG 298
Score = 170 (64.9 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 39/150 (26%), Positives = 71/150 (47%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
+ GH+ V + + P +VS ++ I WD G + ++GH + +S++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAG-DFERTLKGHTDSVQDISFD- 159
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
+ AS D I++WD +C+R + H +V+ + +G I SAS+D+T
Sbjct: 160 ----QTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+K+W + G +T GH WV + + D
Sbjct: 216 MKMWEVATGYCVKTFTGHREWVRMVRPNQD 245
Score = 169 (64.5 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 40/129 (31%), Positives = 65/129 (50%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W PE +++ TG + N P G + S S DK+IK+WD G + TL GH
Sbjct: 284 WAPESAHPTISEATGSE---NKKSGKP-GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDN 339
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V V + R +VS + D TL++W+ K K+ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGS 399
Query: 564 KDKVLRLWQ 572
D+ +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 167 (63.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 53/187 (28%), Positives = 88/187 (47%)
Query: 335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS-TDY 392
L+ H VT + + L+ SAS+D TIKVW G RTL+GH V ++ T
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 393 LMR-VEATST---GGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L+ A T F+ ++ H ++ A P G+ +VS S D T+ +W
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV-AIMPNGDHIVSASRDKTMKMWEVA 222
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ TGH++ + V + DG ++AS S D+++++W + LR H V
Sbjct: 223 TGY-CVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 508 VAWSSDS 514
++W+ +S
Sbjct: 282 ISWAPES 288
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 58/219 (26%), Positives = 104/219 (47%)
Query: 288 MRGHKQWITALSWEP-FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH+ +T + + P F L S+ +D I++WD R L HT SV I
Sbjct: 104 LSGHRSPVTRVIFHPVFSL------MVSASEDATIKVWDYEAGDFERTLKGHTDSVQDIS 157
Query: 347 WGGSG-LIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLAL--STDYLMRVEATSTG 402
+ +G L+ S S D TIK+W G C RT+ GH H V+++A+ + D+++ T
Sbjct: 158 FDQTGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTM 216
Query: 403 GFKYDPANP---EESSKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG 458
++ A + + H + +G L S S+D T+ +W K+ A +
Sbjct: 217 KM-WEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW-VVATKECKAELRE 274
Query: 459 HQQLINCVEFSPDGR--IIASASFDKSIKLWDGRIGKFI 495
H+ ++ C+ ++P+ I+ A+ ++ K G+ G F+
Sbjct: 275 HEHVVECISWAPESAHPTISEATGSENKK--SGKPGPFL 311
Score = 156 (60.0 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 34/104 (32%), Positives = 55/104 (52%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L+SGS D T+ +W+ L + GH + V F P GR + S + DK++++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGM-CLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWD 366
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
+ + + TL H V + + S +V+GS D T+KVW +
Sbjct: 367 YKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 100 (40.3 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 18/64 (28%), Positives = 37/64 (57%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P G +VS +DD TL +W+ K K+ + ++ H+ + ++F + + S D+++K+
Sbjct: 348 PGGRFVVSCADDKTLRIWD-YKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKV 406
Query: 487 WDGR 490
W+ R
Sbjct: 407 WECR 410
Score = 60 (26.2 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 138
++ GH V V F P + S S D T++ WD
Sbjct: 103 ALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWD 136
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 296 (109.3 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 94/324 (29%), Positives = 149/324 (45%)
Query: 189 AVFQVRPVTRCTSS------MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 242
A+ Q P RC+S + GH V KF PNG +LAS D + W+V
Sbjct: 44 ALLQAGP-PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDN 102
Query: 243 FKC-EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWE 301
+ +GH V+ + ++ D L S + + WDS TG+++ + ++GH ++ S
Sbjct: 103 YATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--SCY 159
Query: 302 PFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDR 360
P Q + DG +++WD+ V+ +T V + + S I S D
Sbjct: 160 PARRGPQL--VCTGSDDGTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDN 216
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTD--YLMRVEATSTGG-FKYDPANPEE---- 413
IKVW + T+ GHA V L+LS++ YL+ +T + P P+E
Sbjct: 217 DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVK 276
Query: 414 ---SSKHALAKYQAQC---PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE 467
+ H K +C P+G K+ +GS D +++W+ ++ L ++ GH IN V
Sbjct: 277 IFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS-RRVLYKLPGHAGSINEVA 335
Query: 468 FSPDGRIIASASFDKSIKLWDGRI 491
F PD II SAS DK +L+ G I
Sbjct: 336 FHPDEPIILSASSDK--RLYMGEI 357
Score = 242 (90.2 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 75/256 (29%), Positives = 124/256 (48%)
Query: 332 VRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRA-SDGVMCRTLEGHAHWVNTLALS 389
+ +L+ H V C ++ +G + SA DR I +W D TL+GH+ V L +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 390 TDYLMRVEATSTGGFK-YDPANPEESSK-HALAKYQAQC-P--EGEKLV-SGSDDFTLFL 443
TD M A++ +D E + + C P G +LV +GSDD T+ L
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ K K ++ Q++ V F+ I S D IK+WD R K T+RGH
Sbjct: 180 WDIRK-KAAVQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKT----KKIEQDLPG--HGDE--VYAVDWAPD 555
+V ++ SS+ L+S + D+T++VW+++ ++ + G H E + W+PD
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 297
Query: 556 GEKVASGGKDKVLRLW 571
G K+A+G D+ + +W
Sbjct: 298 GSKIAAGSADRFVYVW 313
Score = 236 (88.1 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 71/283 (25%), Positives = 129/283 (45%)
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQC--VRVLTSHTRSVTCIRWGGSG-LIYSASQD 359
FH N AS+G D I +W+V C L H+ +V + + G +++SAS D
Sbjct: 75 FHPNGST--LASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTD 131
Query: 360 RTIKVWRASDGVMCRTLEGHAHWVNTL--ALSTDYLMRVEATSTGGFKYDPANPEESSKH 417
+T+ VW + G + L+GH +VN+ A L+ + G K + + +
Sbjct: 132 KTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV-CTGSDDGTVKLWDIRKKAAVQT 190
Query: 418 ALAKYQAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR 473
YQ ++++SG D + +W+ + K + M GH + + S +G
Sbjct: 191 FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGS 249
Query: 474 IIASASFDKSIKLWDGRI----GKFITTLRGHV----QAVYMVAWSSDSRLLVSGSADST 525
+ S + D ++++WD R + + +G+V + + +WS D + +GSAD
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 526 LKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
+ VW+ ++++ LPGH + V + PD + S DK L
Sbjct: 310 VYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 175 (66.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 81/324 (25%), Positives = 133/324 (41%)
Query: 92 AVFQVRPVTRCTSS------MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 145
A+ Q P RC+S + GH V KF PNG +LAS D + W+V
Sbjct: 44 ALLQAGP-PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD--- 99
Query: 146 FKCEGTPYLFYVNETEITKTL---ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS 202
C+ Y + L D L + +T++ V V+ + +V+
Sbjct: 100 --CDN--YATLKGHSGAVMELHYNTDGSMLFSASTDKTV-AVWDSETGERVK-------R 147
Query: 203 MPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
+ GH V S + G L +GS D TV+ WD+ + + + + + VL + ++ S
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTS 206
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
Q++SG + I WD K + MRGH +T LS ++ + +
Sbjct: 207 DQIISGGIDNDIKVWDLRQNK-LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Query: 322 RIWDVILSQCVRVLTS--HTRSVTCIR--WGGSGL-IYSASQDRTIKVWRASDGVMCRTL 376
R + +CV++ H +R W G I + S DR + VW + + L
Sbjct: 266 RPF-APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKL 324
Query: 377 EGHAHWVNTLALSTDYLMRVEATS 400
GHA +N +A D + + A+S
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASS 348
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 56/268 (20%), Positives = 114/268 (42%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
+++ GH+ AV+ + ++ +G L S S D TV WD T + + +G + +VN
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG--HTSFVNSCYPA 161
Query: 164 KTLADVLPLDTLN-TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL 222
+ ++ + + T ++ DI +K+A Q T V++V F+ +
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDI--RKKAAVQTFQNTY----------QVLAVTFNDTSDQI 209
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS---S 279
SG D ++ WD+ + GH V ++ S + L+S + + WD +
Sbjct: 210 ISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFA 269
Query: 280 TGKQIGQPMRGH----KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
++ + +G+ ++ + SW P + A+ D + +WD + + L
Sbjct: 270 PKERCVKIFQGNVHNFEKNLLRCSWSP-----DGSKIAAGSADRFVYVWDTTSRRVLYKL 324
Query: 336 TSHTRSVTCIRWG-GSGLIYSASQDRTI 362
H S+ + + +I SAS D+ +
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSDKRL 352
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 295 (108.9 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 93/324 (28%), Positives = 149/324 (45%)
Query: 189 AVFQVRPVTRCTSS------MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 242
A+ Q P RC+S + GH V KF PNG +LAS D + W+V
Sbjct: 44 ALLQAGP-PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDN 102
Query: 243 FKC-EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWE 301
+ +GH V+ + ++ D L S + + WDS TG+++ + ++GH ++ S
Sbjct: 103 YATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--SCY 159
Query: 302 PFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDR 360
P Q + DG +++WD+ ++ +T V + + S I S D
Sbjct: 160 PARRGPQL--VCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDN 216
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTD--YLMRVEATSTGG-FKYDPANPEE---- 413
IKVW + T+ GHA V L+LS++ YL+ +T + P P+E
Sbjct: 217 DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVR 276
Query: 414 ---SSKHALAKYQAQC---PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE 467
+ H K +C P+G K+ +GS D +++W+ ++ L ++ GH IN V
Sbjct: 277 IFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS-RRILYKLPGHAGSINEVA 335
Query: 468 FSPDGRIIASASFDKSIKLWDGRI 491
F PD II SAS DK +L+ G I
Sbjct: 336 FHPDEPIILSASSDK--RLYMGEI 357
Score = 243 (90.6 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 75/256 (29%), Positives = 124/256 (48%)
Query: 332 VRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRA-SDGVMCRTLEGHAHWVNTLALS 389
+ +L+ H V C ++ +G + SA DR I +W D TL+GH+ V L +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 390 TDYLMRVEATSTGGFK-YDPANPEESSK-HALAKYQAQC-P--EGEKLV-SGSDDFTLFL 443
TD M A++ +D E + + C P G +LV +GSDD T+ L
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ K K ++ Q++ V F+ I S D IK+WD R K T+RGH
Sbjct: 180 WDIRK-KAAIQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKT----KKIEQDLPG--HGDE--VYAVDWAPD 555
+V ++ SS+ L+S + D+T++VW+++ ++ + G H E + W+PD
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPD 297
Query: 556 GEKVASGGKDKVLRLW 571
G K+A+G D+ + +W
Sbjct: 298 GSKIAAGSADRFVYVW 313
Score = 237 (88.5 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 72/283 (25%), Positives = 129/283 (45%)
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQC--VRVLTSHTRSVTCIRWGGSG-LIYSASQD 359
FH N AS+G D I +W+V C L H+ +V + + G +++SAS D
Sbjct: 75 FHPNGST--LASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTD 131
Query: 360 RTIKVWRASDGVMCRTLEGHAHWVNTL--ALSTDYLMRVEATSTGGFKYDPANPEESSKH 417
+T+ VW + G + L+GH +VN+ A L+ + G K + + +
Sbjct: 132 KTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV-CTGSDDGTVKLWDIRKKAAIQT 190
Query: 418 ALAKYQAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR 473
YQ ++++SG D + +W+ + K + M GH + + S +G
Sbjct: 191 FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGS 249
Query: 474 IIASASFDKSIKLWDGRI----GKFITTLRGHV----QAVYMVAWSSDSRLLVSGSADST 525
+ S + D ++++WD R + + +G+V + + +WS D + +GSAD
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 526 LKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
+ VW+ +++I LPGH + V + PD + S DK L
Sbjct: 310 VYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 179 (68.1 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 82/324 (25%), Positives = 133/324 (41%)
Query: 92 AVFQVRPVTRCTSS------MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 145
A+ Q P RC+S + GH V KF PNG +LAS D + W+V
Sbjct: 44 ALLQAGP-PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD--- 99
Query: 146 FKCEGTPYLFYVNETEITKTL---ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS 202
C+ Y + L D L + +T++ V V+ + +V+
Sbjct: 100 --CDN--YATLKGHSGAVMELHYNTDGSMLFSASTDKTV-AVWDSETGERVK-------R 147
Query: 203 MPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
+ GH V S + G L +GS D TV+ WD+ + + + + + VL + ++ S
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTS 206
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
Q++SG + I WD K + MRGH +T LS ++ + +
Sbjct: 207 DQIISGGIDNDIKVWDLRQNK-LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Query: 322 RIWDVILSQCVRVLTS--HTRSVTCIR--WGGSGL-IYSASQDRTIKVWRASDGVMCRTL 376
R + +CVR+ H +R W G I + S DR + VW + + L
Sbjct: 266 RPF-APKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKL 324
Query: 377 EGHAHWVNTLALSTDYLMRVEATS 400
GHA +N +A D + + A+S
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASS 348
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 56/268 (20%), Positives = 114/268 (42%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
+++ GH+ AV+ + ++ +G L S S D TV WD T + + +G + +VN
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG--HTSFVNSCYPA 161
Query: 164 KTLADVLPLDTLN-TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL 222
+ ++ + + T ++ DI +K+A Q T V++V F+ +
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDI--RKKAAIQTFQNTY----------QVLAVTFNDTSDQI 209
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS---S 279
SG D ++ WD+ + GH V ++ S + L+S + + WD +
Sbjct: 210 ISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFA 269
Query: 280 TGKQIGQPMRGH----KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
++ + +G+ ++ + SW P + A+ D + +WD + + L
Sbjct: 270 PKERCVRIFQGNVHNFEKNLLRCSWSP-----DGSKIAAGSADRFVYVWDTTSRRILYKL 324
Query: 336 TSHTRSVTCIRWG-GSGLIYSASQDRTI 362
H S+ + + +I SAS D+ +
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSDKRL 352
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 295 (108.9 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 93/324 (28%), Positives = 149/324 (45%)
Query: 189 AVFQVRPVTRCTSS------MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 242
A+ Q P RC+S + GH V KF PNG +LAS D + W+V
Sbjct: 43 ALLQAGP-PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDN 101
Query: 243 FKC-EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWE 301
+ +GH V+ + ++ D L S + + WDS TG+++ + ++GH ++ S
Sbjct: 102 YATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--SCY 158
Query: 302 PFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDR 360
P Q + DG +++WD+ ++ +T V + + S I S D
Sbjct: 159 PARRGPQL--VCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDN 215
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTD--YLMRVEATSTGG-FKYDPANPEE---- 413
IKVW + T+ GHA V L+LS++ YL+ +T + P P+E
Sbjct: 216 DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVK 275
Query: 414 ---SSKHALAKYQAQC---PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE 467
+ H K +C P+G K+ +GS D +++W+ ++ L ++ GH IN V
Sbjct: 276 IFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS-RRILYKLPGHAGSINEVA 334
Query: 468 FSPDGRIIASASFDKSIKLWDGRI 491
F PD II SAS DK +L+ G I
Sbjct: 335 FHPDEPIIISASSDK--RLYMGEI 356
Score = 243 (90.6 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 75/256 (29%), Positives = 124/256 (48%)
Query: 332 VRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRA-SDGVMCRTLEGHAHWVNTLALS 389
+ +L+ H V C ++ +G + SA DR I +W D TL+GH+ V L +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 118
Query: 390 TDYLMRVEATSTGGFK-YDPANPEESSK-HALAKYQAQC-P--EGEKLV-SGSDDFTLFL 443
TD M A++ +D E + + C P G +LV +GSDD T+ L
Sbjct: 119 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 178
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ K K ++ Q++ V F+ I S D IK+WD R K T+RGH
Sbjct: 179 WDIRK-KAAIQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 236
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKT----KKIEQDLPG--HGDE--VYAVDWAPD 555
+V ++ SS+ L+S + D+T++VW+++ ++ + G H E + W+PD
Sbjct: 237 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 296
Query: 556 GEKVASGGKDKVLRLW 571
G K+A+G D+ + +W
Sbjct: 297 GSKIAAGSADRFVYVW 312
Score = 237 (88.5 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 72/283 (25%), Positives = 129/283 (45%)
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQC--VRVLTSHTRSVTCIRWGGSG-LIYSASQD 359
FH N AS+G D I +W+V C L H+ +V + + G +++SAS D
Sbjct: 74 FHPNGST--LASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTD 130
Query: 360 RTIKVWRASDGVMCRTLEGHAHWVNTL--ALSTDYLMRVEATSTGGFKYDPANPEESSKH 417
+T+ VW + G + L+GH +VN+ A L+ + G K + + +
Sbjct: 131 KTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV-CTGSDDGTVKLWDIRKKAAIQT 189
Query: 418 ALAKYQAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR 473
YQ ++++SG D + +W+ + K + M GH + + S +G
Sbjct: 190 FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGS 248
Query: 474 IIASASFDKSIKLWDGRI----GKFITTLRGHV----QAVYMVAWSSDSRLLVSGSADST 525
+ S + D ++++WD R + + +G+V + + +WS D + +GSAD
Sbjct: 249 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 308
Query: 526 LKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
+ VW+ +++I LPGH + V + PD + S DK L
Sbjct: 309 VYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRL 351
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 81/324 (25%), Positives = 133/324 (41%)
Query: 92 AVFQVRPVTRCTSS------MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 145
A+ Q P RC+S + GH V KF PNG +LAS D + W+V
Sbjct: 43 ALLQAGP-PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD--- 98
Query: 146 FKCEGTPYLFYVNETEITKTL---ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS 202
C+ Y + L D L + +T++ V V+ + +V+
Sbjct: 99 --CDN--YATLKGHSGAVMELHYNTDGSMLFSASTDKTV-AVWDSETGERVK-------R 146
Query: 203 MPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
+ GH V S + G L +GS D TV+ WD+ + + + + + VL + ++ S
Sbjct: 147 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTS 205
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
Q++SG + I WD K + MRGH +T LS ++ + +
Sbjct: 206 DQIISGGIDNDIKVWDLRQNK-LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Query: 322 RIWDVILSQCVRVLTS--HTRSVTCIR--WGGSGL-IYSASQDRTIKVWRASDGVMCRTL 376
R + +CV++ H +R W G I + S DR + VW + + L
Sbjct: 265 RPF-APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKL 323
Query: 377 EGHAHWVNTLALSTDYLMRVEATS 400
GHA +N +A D + + A+S
Sbjct: 324 PGHAGSINEVAFHPDEPIIISASS 347
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 56/268 (20%), Positives = 114/268 (42%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
+++ GH+ AV+ + ++ +G L S S D TV WD T + + +G + +VN
Sbjct: 103 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG--HTSFVNSCYPA 160
Query: 164 KTLADVLPLDTLN-TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL 222
+ ++ + + T ++ DI +K+A Q T V++V F+ +
Sbjct: 161 RRGPQLVCTGSDDGTVKLWDI--RKKAAIQTFQNTY----------QVLAVTFNDTSDQI 208
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS---S 279
SG D ++ WD+ + GH V ++ S + L+S + + WD +
Sbjct: 209 ISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFA 268
Query: 280 TGKQIGQPMRGH----KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
++ + +G+ ++ + SW P + A+ D + +WD + + L
Sbjct: 269 PKERCVKIFQGNVHNFEKNLLRCSWSP-----DGSKIAAGSADRFVYVWDTTSRRILYKL 323
Query: 336 TSHTRSVTCIRWG-GSGLIYSASQDRTI 362
H S+ + + +I SAS D+ +
Sbjct: 324 PGHAGSINEVAFHPDEPIIISASSDKRL 351
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 295 (108.9 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 93/324 (28%), Positives = 149/324 (45%)
Query: 189 AVFQVRPVTRCTSS------MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 242
A+ Q P RC+S + GH V KF PNG +LAS D + W+V
Sbjct: 44 ALLQAGP-PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDN 102
Query: 243 FKC-EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWE 301
+ +GH V+ + ++ D L S + + WDS TG+++ + ++GH ++ S
Sbjct: 103 YATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--SCY 159
Query: 302 PFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDR 360
P Q + DG +++WD+ ++ +T V + + S I S D
Sbjct: 160 PARRGPQL--VCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDN 216
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTD--YLMRVEATSTGG-FKYDPANPEE---- 413
IKVW + T+ GHA V L+LS++ YL+ +T + P P+E
Sbjct: 217 DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVK 276
Query: 414 ---SSKHALAKYQAQC---PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE 467
+ H K +C P+G K+ +GS D +++W+ ++ L ++ GH IN V
Sbjct: 277 IFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS-RRILYKLPGHAGSINEVA 335
Query: 468 FSPDGRIIASASFDKSIKLWDGRI 491
F PD II SAS DK +L+ G I
Sbjct: 336 FHPDEPIILSASSDK--RLYMGEI 357
Score = 243 (90.6 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 75/256 (29%), Positives = 124/256 (48%)
Query: 332 VRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRA-SDGVMCRTLEGHAHWVNTLALS 389
+ +L+ H V C ++ +G + SA DR I +W D TL+GH+ V L +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 390 TDYLMRVEATSTGGFK-YDPANPEESSK-HALAKYQAQC-P--EGEKLV-SGSDDFTLFL 443
TD M A++ +D E + + C P G +LV +GSDD T+ L
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ K K ++ Q++ V F+ I S D IK+WD R K T+RGH
Sbjct: 180 WDIRK-KAAIQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKT----KKIEQDLPG--HGDE--VYAVDWAPD 555
+V ++ SS+ L+S + D+T++VW+++ ++ + G H E + W+PD
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 297
Query: 556 GEKVASGGKDKVLRLW 571
G K+A+G D+ + +W
Sbjct: 298 GSKIAAGSADRFVYVW 313
Score = 237 (88.5 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 72/283 (25%), Positives = 129/283 (45%)
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQC--VRVLTSHTRSVTCIRWGGSG-LIYSASQD 359
FH N AS+G D I +W+V C L H+ +V + + G +++SAS D
Sbjct: 75 FHPNGST--LASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTD 131
Query: 360 RTIKVWRASDGVMCRTLEGHAHWVNTL--ALSTDYLMRVEATSTGGFKYDPANPEESSKH 417
+T+ VW + G + L+GH +VN+ A L+ + G K + + +
Sbjct: 132 KTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV-CTGSDDGTVKLWDIRKKAAIQT 190
Query: 418 ALAKYQAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR 473
YQ ++++SG D + +W+ + K + M GH + + S +G
Sbjct: 191 FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGS 249
Query: 474 IIASASFDKSIKLWDGRI----GKFITTLRGHV----QAVYMVAWSSDSRLLVSGSADST 525
+ S + D ++++WD R + + +G+V + + +WS D + +GSAD
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 526 LKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
+ VW+ +++I LPGH + V + PD + S DK L
Sbjct: 310 VYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 176 (67.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 81/324 (25%), Positives = 133/324 (41%)
Query: 92 AVFQVRPVTRCTSS------MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 145
A+ Q P RC+S + GH V KF PNG +LAS D + W+V
Sbjct: 44 ALLQAGP-PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD--- 99
Query: 146 FKCEGTPYLFYVNETEITKTL---ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS 202
C+ Y + L D L + +T++ V V+ + +V+
Sbjct: 100 --CDN--YATLKGHSGAVMELHYNTDGSMLFSASTDKTV-AVWDSETGERVK-------R 147
Query: 203 MPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
+ GH V S + G L +GS D TV+ WD+ + + + + + VL + ++ S
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTS 206
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
Q++SG + I WD K + MRGH +T LS ++ + +
Sbjct: 207 DQIISGGIDNDIKVWDLRQNK-LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Query: 322 RIWDVILSQCVRVLTS--HTRSVTCIR--WGGSGL-IYSASQDRTIKVWRASDGVMCRTL 376
R + +CV++ H +R W G I + S DR + VW + + L
Sbjct: 266 RPF-APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKL 324
Query: 377 EGHAHWVNTLALSTDYLMRVEATS 400
GHA +N +A D + + A+S
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASS 348
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 56/268 (20%), Positives = 114/268 (42%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
+++ GH+ AV+ + ++ +G L S S D TV WD T + + +G + +VN
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG--HTSFVNSCYPA 161
Query: 164 KTLADVLPLDTLN-TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL 222
+ ++ + + T ++ DI +K+A Q T V++V F+ +
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDI--RKKAAIQTFQNTY----------QVLAVTFNDTSDQI 209
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS---S 279
SG D ++ WD+ + GH V ++ S + L+S + + WD +
Sbjct: 210 ISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFA 269
Query: 280 TGKQIGQPMRGH----KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
++ + +G+ ++ + SW P + A+ D + +WD + + L
Sbjct: 270 PKERCVKIFQGNVHNFEKNLLRCSWSP-----DGSKIAAGSADRFVYVWDTTSRRILYKL 324
Query: 336 TSHTRSVTCIRWG-GSGLIYSASQDRTI 362
H S+ + + +I SAS D+ +
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSDKRL 352
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 295 (108.9 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 93/324 (28%), Positives = 149/324 (45%)
Query: 189 AVFQVRPVTRCTSS------MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 242
A+ Q P RC+S + GH V KF PNG +LAS D + W+V
Sbjct: 44 ALLQAGP-PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDN 102
Query: 243 FKC-EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWE 301
+ +GH V+ + ++ D L S + + WDS TG+++ + ++GH ++ S
Sbjct: 103 YATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--SCY 159
Query: 302 PFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDR 360
P Q + DG +++WD+ ++ +T V + + S I S D
Sbjct: 160 PARRGPQL--VCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDN 216
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTD--YLMRVEATSTGG-FKYDPANPEE---- 413
IKVW + T+ GHA V L+LS++ YL+ +T + P P+E
Sbjct: 217 DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVK 276
Query: 414 ---SSKHALAKYQAQC---PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE 467
+ H K +C P+G K+ +GS D +++W+ ++ L ++ GH IN V
Sbjct: 277 IFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS-RRILYKLPGHAGSINEVA 335
Query: 468 FSPDGRIIASASFDKSIKLWDGRI 491
F PD II SAS DK +L+ G I
Sbjct: 336 FHPDEPIILSASSDK--RLYMGEI 357
Score = 243 (90.6 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 75/256 (29%), Positives = 124/256 (48%)
Query: 332 VRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRA-SDGVMCRTLEGHAHWVNTLALS 389
+ +L+ H V C ++ +G + SA DR I +W D TL+GH+ V L +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 390 TDYLMRVEATSTGGFK-YDPANPEESSK-HALAKYQAQC-P--EGEKLV-SGSDDFTLFL 443
TD M A++ +D E + + C P G +LV +GSDD T+ L
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ K K ++ Q++ V F+ I S D IK+WD R K T+RGH
Sbjct: 180 WDIRK-KAAIQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKT----KKIEQDLPG--HGDE--VYAVDWAPD 555
+V ++ SS+ L+S + D+T++VW+++ ++ + G H E + W+PD
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 297
Query: 556 GEKVASGGKDKVLRLW 571
G K+A+G D+ + +W
Sbjct: 298 GSKIAAGSADRFVYVW 313
Score = 237 (88.5 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 72/283 (25%), Positives = 129/283 (45%)
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQC--VRVLTSHTRSVTCIRWGGSG-LIYSASQD 359
FH N AS+G D I +W+V C L H+ +V + + G +++SAS D
Sbjct: 75 FHPNGST--LASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTD 131
Query: 360 RTIKVWRASDGVMCRTLEGHAHWVNTL--ALSTDYLMRVEATSTGGFKYDPANPEESSKH 417
+T+ VW + G + L+GH +VN+ A L+ + G K + + +
Sbjct: 132 KTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV-CTGSDDGTVKLWDIRKKAAIQT 190
Query: 418 ALAKYQAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR 473
YQ ++++SG D + +W+ + K + M GH + + S +G
Sbjct: 191 FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGS 249
Query: 474 IIASASFDKSIKLWDGRI----GKFITTLRGHV----QAVYMVAWSSDSRLLVSGSADST 525
+ S + D ++++WD R + + +G+V + + +WS D + +GSAD
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 526 LKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
+ VW+ +++I LPGH + V + PD + S DK L
Sbjct: 310 VYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 176 (67.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 81/324 (25%), Positives = 133/324 (41%)
Query: 92 AVFQVRPVTRCTSS------MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 145
A+ Q P RC+S + GH V KF PNG +LAS D + W+V
Sbjct: 44 ALLQAGP-PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD--- 99
Query: 146 FKCEGTPYLFYVNETEITKTL---ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS 202
C+ Y + L D L + +T++ V V+ + +V+
Sbjct: 100 --CDN--YATLKGHSGAVMELHYNTDGSMLFSASTDKTV-AVWDSETGERVK-------R 147
Query: 203 MPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
+ GH V S + G L +GS D TV+ WD+ + + + + + VL + ++ S
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTS 206
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
Q++SG + I WD K + MRGH +T LS ++ + +
Sbjct: 207 DQIISGGIDNDIKVWDLRQNK-LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Query: 322 RIWDVILSQCVRVLTS--HTRSVTCIR--WGGSGL-IYSASQDRTIKVWRASDGVMCRTL 376
R + +CV++ H +R W G I + S DR + VW + + L
Sbjct: 266 RPF-APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKL 324
Query: 377 EGHAHWVNTLALSTDYLMRVEATS 400
GHA +N +A D + + A+S
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASS 348
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 56/268 (20%), Positives = 114/268 (42%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
+++ GH+ AV+ + ++ +G L S S D TV WD T + + +G + +VN
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG--HTSFVNSCYPA 161
Query: 164 KTLADVLPLDTLN-TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL 222
+ ++ + + T ++ DI +K+A Q T V++V F+ +
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDI--RKKAAIQTFQNTY----------QVLAVTFNDTSDQI 209
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS---S 279
SG D ++ WD+ + GH V ++ S + L+S + + WD +
Sbjct: 210 ISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFA 269
Query: 280 TGKQIGQPMRGH----KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
++ + +G+ ++ + SW P + A+ D + +WD + + L
Sbjct: 270 PKERCVKIFQGNVHNFEKNLLRCSWSP-----DGSKIAAGSADRFVYVWDTTSRRILYKL 324
Query: 336 TSHTRSVTCIRWG-GSGLIYSASQDRTI 362
H S+ + + +I SAS D+ +
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSDKRL 352
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 297 (109.6 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 77/292 (26%), Positives = 139/292 (47%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
+GH+ +T + F LN + AS D + IW + T H +VTC+ +
Sbjct: 16 KGHRDAVTCVD---FSLN--TKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
SG L+ S S+D+T+++W + H V ++ +D V A+ K
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 408 PANPEESSKHALAKY--QAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
+ + +L ++ +C P+G +VS SDD T+ LW+ + ++ + H
Sbjct: 131 STH-RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECIHSYCEHGG 188
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
+ V+F P G IA+A D ++K+WD R + + + H AV +++ L++ S
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITAS 248
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
+DSTLK+ ++ ++ L GH V ++ GE ASGG D+ + +W++
Sbjct: 249 SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 275 (101.9 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 81/307 (26%), Positives = 134/307 (43%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF-H 304
+GH+ V C+ +S ++K L SG + + W + + GHK +T +++ P H
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYR-FTGHKDAVTCVNFSPSGH 74
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIK 363
L AS +D +RIW + V +HT +V + + G + +AS D+T+K
Sbjct: 75 L------LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK 128
Query: 364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE---ESSKHA- 418
VW +L H +WV S D + V A+ K +D + E +H
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGG 188
Query: 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
Y P G + + D T+ +W+ + + L H +N + F P G + +A
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDA-RTHRLLQHYQLHSAAVNALSFHPSGNYLITA 247
Query: 479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ 538
S D ++K+ D G+ + TL GH VA+S SG +D + VW K
Sbjct: 248 SSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW-----KSNF 302
Query: 539 DLPGHGD 545
D+ +GD
Sbjct: 303 DIVDYGD 309
Score = 258 (95.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 76/289 (26%), Positives = 121/289 (41%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH +AV V FS N + LASGS D+T+ W + Q+ ++ GHK V C+ +SP L
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
SG ++ + W + K R H + ++ H + ++ D +++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRSV-----HFCSDGQSLVTASDDKTVKVW 130
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
+ + LT H V C ++ G LI SAS D+T+K+W + + H +V
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFV 190
Query: 384 NTLALSTDYLMRVEATSTGGFKYDPANPEESSKH-----ALAKYQAQCPEGEKLVSGSDD 438
+ A K A +H A + P G L++ S D
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSD 250
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
TL + + E + L + GHQ V FS G AS D+ + +W
Sbjct: 251 STLKILDL-MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 251 (93.4 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 67/244 (27%), Positives = 114/244 (46%)
Query: 333 RVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS-T 390
R H +VTC+ + + + S S D T+ +W GH V + S +
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 391 DYLMRVEATSTGGFKYDPANPEESS---KH-ALAKYQAQCPEGEKLVSGSDDFTLFLWNP 446
+L+ + + P ES+ H A + C +G+ LV+ SDD T+ +W+
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
+++ L +T H + C +FSPDGR+I SAS DK++KLWD + I + H V
Sbjct: 133 HRQR-FLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVT 191
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
V + + + D+T+KVW+ +T ++ Q H V A+ + P G + + D
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDS 251
Query: 567 VLRL 570
L++
Sbjct: 252 TLKI 255
Score = 243 (90.6 bits), Expect = 7.2e-18, P = 7.2e-18
Identities = 79/297 (26%), Positives = 137/297 (46%)
Query: 77 TLNTEEVVD-IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVR 135
+LNT+ + + ++ ++P +R GH +AV V FSP+G LASGS D TVR
Sbjct: 28 SLNTKHLASGSMDSTLMIWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVR 86
Query: 136 FWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQV 193
W P K E T + + +D L T + ++ V + ++++ +F
Sbjct: 87 IW-----VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLF-- 139
Query: 194 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-CEGHKHWV 252
S+ H V KFSP+GR + S S D TV+ WD T++ + CE H +V
Sbjct: 140 --------SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCE-HGGFV 190
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
+ + P + + + + WD+ T + + Q + H + ALS+ P N+
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDARTHRLL-QHYQLHSAAVNALSFHPSG-NYLIT-- 246
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRAS 368
ASS D ++I D++ + + L H T + + +G + S D + VW+++
Sbjct: 247 ASS--DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 186 (70.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 56/195 (28%), Positives = 86/195 (44%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH +AV V FS N + LASGS D+T+ W + Q+ ++ G ++ +T
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTG-------HKDAVT--CV 67
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
+ P L D K V V ++ H V SV F +G+SL + S
Sbjct: 68 NFSPSGHLLASGSRD----KTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASD 123
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
D TV+ W Q LF H +WV C +SPD + +VS + + WD T ++
Sbjct: 124 DKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK-TSRECIHS 182
Query: 288 MRGHKQWITALSWEP 302
H ++T + + P
Sbjct: 183 YCEHGGFVTYVDFHP 197
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 239 (89.2 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 61/203 (30%), Positives = 92/203 (45%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH ++V + F +G+ LAS S D T++ WD + GH H V +A P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+VS ++ I W+ TG + + GH++W+ + P N AS D +
Sbjct: 205 DHIVSAARDKTIKMWEVQTGYCV-KTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWG------------GS-----G----LIYSASQDR 360
R+W V +C L H V CI W GS G + S S+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 361 TIKVWRASDGVMCRTLEGHAHWV 383
TIK+W S G+ TL GH +WV
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWV 341
Score = 224 (83.9 bits), Expect = 6.0e-18, Sum P(2) = 6.0e-18
Identities = 57/205 (27%), Positives = 93/205 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C +M GH V SV PNG + S + D T++ W+V T + GH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 259 PDSKQLVSGCKNG-VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH--------LNHQC 309
D L++ C N + W +T K+ +R H+ + +SW P +
Sbjct: 244 QDGT-LIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 310 RR------FASSG-KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
++ F SG +D I++WDV C+ L H V + + G I S + D+T
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTL 386
++VW + +TL H H+V +L
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHFVTSL 386
Score = 224 (83.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 77/284 (27%), Positives = 131/284 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH ++V + F +G+ LAS S D T++ WD F+C T + N + +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGHDHNVSSVA- 199
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
++P N + +V K +++V+ C + GH E V V+ + +G +A
Sbjct: 200 ----IMP----NGDHIVSAARDKTIKMWEVQ-TGYCVKTFTGHREWVRMVRPNQDGTLIA 250
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S S D TVR W V T+ + H+H V CI+W+P+S + + A S T K+
Sbjct: 251 SCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY------SSISEATGSET-KK 303
Query: 284 IGQP----MRGH-----KQW--------ITAL---SWEPFHLNHQCRRFA-SSGKDGAIR 322
G+P + G K W +T + +W L H +F S D +R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
+WD +C++ L +H VT + + + + + S D+T+KVW
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 214 (80.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 42/129 (32%), Positives = 73/129 (56%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W P +K ++GH+ + V F P ++ SAS D +IK+WD G F TL+GH
Sbjct: 94 WIPRPPEKYA--LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 151
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+V +++ +LL S SAD T+K+W+ + + + + GH V +V P+G+ + S
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAA 211
Query: 564 KDKVLRLWQ 572
+DK +++W+
Sbjct: 212 RDKTIKMWE 220
Score = 210 (79.0 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 59/186 (31%), Positives = 92/186 (49%)
Query: 397 EATSTG--GFKYDPAN--PEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNP 446
E TS G G K DP P K+AL+ +++ P +VS S+D T+ +W
Sbjct: 78 EFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW-- 135
Query: 447 EKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ E R + GH + + F G+++AS S D +IKLWD + + I T+ GH V
Sbjct: 136 DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 195
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
VA + +VS + D T+K+W ++T + GH + V V DG +AS D
Sbjct: 196 SSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 566 KVLRLW 571
+ +R+W
Sbjct: 256 QTVRVW 261
Score = 205 (77.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 56/185 (30%), Positives = 90/185 (48%)
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFK---YDPANPEESSK-HALAKYQAQCPE-GE 430
L GH V + + + V A+ K Y+ + E + K H + G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
L S S D T+ LW+ + + + M GH ++ V P+G I SA+ DK+IK+W+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQ 222
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
G + T GH + V MV + D L+ S S D T++VW + TK+ + +L H V +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 551 DWAPD 555
WAP+
Sbjct: 283 SWAPE 287
Score = 190 (71.9 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 58/203 (28%), Positives = 90/203 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH V V F P + S S D T++ WD T +GH V I++
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L S + I WD G + + M GH +++++ P + +H S+ +D I
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP-NGDH----IVSAARDKTI 216
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++W+V CV+ T H V +R G LI S S D+T++VW + L H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
Query: 381 HWVNTL--ALSTDYLMRVEATST 401
H V + A + Y EAT +
Sbjct: 277 HVVECISWAPESSYSSISEATGS 299
Score = 183 (69.5 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 41/150 (27%), Positives = 72/150 (48%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
+ GH+ V + + P +VS ++ I WD TG + ++GH + +S++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
H + AS D I++WD +C+R + H +V+ + +G I SA++D+T
Sbjct: 160 ----HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKT 215
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
IK+W G +T GH WV + + D
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Score = 183 (69.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 58/237 (24%), Positives = 104/237 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C +M GH V SV PNG + S + D T++ W+V T C T + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGY----CVKT-FTGHREWVR 238
Query: 162 ITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRP---VTRCTSSMPGHAEAVISV--- 213
+ + D + + + ++ V + V K+ ++R V C S P + + IS
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Query: 214 ----KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
K G L SGS D T++ WDV+T L GH +WV + + K ++S
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWD 325
+ + WD K+ + + H+ ++T+L + H+ + +G D +++W+
Sbjct: 359 DKTLRVWDYKN-KRCMKTLNAHEHFVTSLDF------HKTAPYVVTGSVDQTVKVWE 408
Score = 171 (65.3 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W PE S++ TG + + G + S S DK+IK+WD G + TL GH
Sbjct: 284 WAPESSYSSISEATGSETK----KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V V + S + ++S + D TL+VW+ K K+ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 564 KDKVLRLWQ 572
D+ +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 169 (64.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 52/187 (27%), Positives = 88/187 (47%)
Query: 335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL--STD 391
L+ H VT + + ++ SAS+D TIKVW G RTL+GH V ++ S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 392 YLMRVEATST---GGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L A T F+ ++ H ++ A P G+ +VS + D T+ +W +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV-AIMPNGDHIVSAARDKTIKMWEVQ 222
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ TGH++ + V + DG +IAS S D+++++W + LR H V
Sbjct: 223 TGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 508 VAWSSDS 514
++W+ +S
Sbjct: 282 ISWAPES 288
Score = 156 (60.0 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 56/218 (25%), Positives = 104/218 (47%)
Query: 288 MRGHKQWITALSWEP-FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH+ +T + + P F + S+ +D I++WD R L HT SV I
Sbjct: 104 LSGHRSPVTRVIFHPVFSV------MVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS 157
Query: 347 WGGSG-LIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLAL--STDYLMRVEATST- 401
+ SG L+ S S D TIK+W G C RT+ GH H V+++A+ + D+++ T
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTI 216
Query: 402 GGFKYDPANPEES-SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
++ ++ + H + +G + S S+D T+ +W K+ A + H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKAELREH 275
Query: 460 QQLINCVEFSPDGRI--IASASFDKSIKLWDGRIGKFI 495
+ ++ C+ ++P+ I+ A+ ++ K G+ G F+
Sbjct: 276 EHVVECISWAPESSYSSISEATGSETKK--SGKPGPFL 311
Score = 144 (55.7 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L+SGS D T+ +W+ L + GH + V F G+ I S + DK++++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
+ + + TL H V + + + +V+GS D T+KVW +
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 63 (27.2 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
++ GH V V F P + S S D T++ WD T
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET 139
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 238 (88.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 61/203 (30%), Positives = 92/203 (45%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH ++V + F +G+ LAS S D T++ WD + GH H V +A P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+VS ++ I W+ TG + + GH++W+ + P N AS D +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCV-KTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWG------------GS-----G----LIYSASQDR 360
R+W V +C L H V CI W GS G + S S+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 361 TIKVWRASDGVMCRTLEGHAHWV 383
TIK+W S G+ TL GH +WV
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWV 341
Score = 227 (85.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 58/205 (28%), Positives = 93/205 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C +M GH V SV PNG + S S D T++ W+V T + GH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 259 PDSKQLVSGCKNG-VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH--------LNHQC 309
D L++ C N + W +T K+ +R H+ + +SW P +
Sbjct: 244 QDGT-LIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 310 RR------FASSG-KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
++ F SG +D I++WDV C+ L H V + + G I S + D+T
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTL 386
++VW + +TL H H+V +L
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHFVTSL 386
Score = 222 (83.2 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 77/284 (27%), Positives = 131/284 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH ++V + F +G+ LAS S D T++ WD F+C T + N + +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGHDHNVSSVA- 199
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
++P N + +V K +++V+ C + GH E V V+ + +G +A
Sbjct: 200 ----IMP----NGDHIVSASRDKTIKMWEVQ-TGYCVKTFTGHREWVRMVRPNQDGTLIA 250
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S S D TVR W V T+ + H+H V CI+W+P+S + + A S T K+
Sbjct: 251 SCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY------SSISEATGSET-KK 303
Query: 284 IGQP----MRGH-----KQW--------ITAL---SWEPFHLNHQCRRFA-SSGKDGAIR 322
G+P + G K W +T + +W L H +F S D +R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
+WD +C++ L +H VT + + + + + S D+T+KVW
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 214 (80.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 42/129 (32%), Positives = 73/129 (56%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W P +K ++GH+ + V F P ++ SAS D +IK+WD G F TL+GH
Sbjct: 94 WIPRPPEKYA--LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 151
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+V +++ +LL S SAD T+K+W+ + + + + GH V +V P+G+ + S
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 564 KDKVLRLWQ 572
+DK +++W+
Sbjct: 212 RDKTIKMWE 220
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 397 EATSTG--GFKYDPAN--PEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNP 446
E TS G G K DP P K+AL+ +++ P +VS S+D T+ +W
Sbjct: 78 EFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW-- 135
Query: 447 EKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ E R + GH + + F G+++AS S D +IKLWD + + I T+ GH V
Sbjct: 136 DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 195
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
VA + +VS S D T+K+W ++T + GH + V V DG +AS D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 566 KVLRLW 571
+ +R+W
Sbjct: 256 QTVRVW 261
Score = 208 (78.3 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 57/185 (30%), Positives = 90/185 (48%)
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFK---YDPANPEESSK-HALAKYQAQCPE-GE 430
L GH V + + + V A+ K Y+ + E + K H + G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
L S S D T+ LW+ + + + M GH ++ V P+G I SAS DK+IK+W+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
G + T GH + V MV + D L+ S S D T++VW + TK+ + +L H V +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 551 DWAPD 555
WAP+
Sbjct: 283 SWAPE 287
Score = 190 (71.9 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 58/203 (28%), Positives = 90/203 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH V V F P + S S D T++ WD T +GH V I++
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L S + I WD G + + M GH +++++ P + +H S+ +D I
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP-NGDH----IVSASRDKTI 216
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++W+V CV+ T H V +R G LI S S D+T++VW + L H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
Query: 381 HWVNTL--ALSTDYLMRVEATST 401
H V + A + Y EAT +
Sbjct: 277 HVVECISWAPESSYSSISEATGS 299
Score = 186 (70.5 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
+ GH+ V + + P +VS ++ I WD TG + ++GH + +S++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
H + AS D I++WD +C+R + H +V+ + +G I SAS+D+T
Sbjct: 160 ----HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
IK+W G +T GH WV + + D
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Score = 186 (70.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/237 (24%), Positives = 104/237 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C +M GH V SV PNG + S S D T++ W+V T C T + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----CVKT-FTGHREWVR 238
Query: 162 ITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRP---VTRCTSSMPGHAEAVISV--- 213
+ + D + + + ++ V + V K+ ++R V C S P + + IS
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Query: 214 ----KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
K G L SGS D T++ WDV+T L GH +WV + + K ++S
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWD 325
+ + WD K+ + + H+ ++T+L + H+ + +G D +++W+
Sbjct: 359 DKTLRVWDYKN-KRCMKTLNAHEHFVTSLDF------HKTAPYVVTGSVDQTVKVWE 408
Score = 172 (65.6 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 53/187 (28%), Positives = 88/187 (47%)
Query: 335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL--STD 391
L+ H VT + + ++ SAS+D TIKVW G RTL+GH V ++ S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 392 YLMRVEATST---GGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L A T F+ ++ H ++ A P G+ +VS S D T+ +W +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV-AIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ TGH++ + V + DG +IAS S D+++++W + LR H V
Sbjct: 223 TGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 508 VAWSSDS 514
++W+ +S
Sbjct: 282 ISWAPES 288
Score = 171 (65.3 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W PE S++ TG + + G + S S DK+IK+WD G + TL GH
Sbjct: 284 WAPESSYSSISEATGSETK----KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V V + S + ++S + D TL+VW+ K K+ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 564 KDKVLRLWQ 572
D+ +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 56/218 (25%), Positives = 104/218 (47%)
Query: 288 MRGHKQWITALSWEP-FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH+ +T + + P F + S+ +D I++WD R L HT SV I
Sbjct: 104 LSGHRSPVTRVIFHPVFSV------MVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS 157
Query: 347 WGGSG-LIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLAL--STDYLMRVEATST- 401
+ SG L+ S S D TIK+W G C RT+ GH H V+++A+ + D+++ T
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 402 GGFKYDPANPEES-SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
++ ++ + H + +G + S S+D T+ +W K+ A + H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKAELREH 275
Query: 460 QQLINCVEFSPDGRI--IASASFDKSIKLWDGRIGKFI 495
+ ++ C+ ++P+ I+ A+ ++ K G+ G F+
Sbjct: 276 EHVVECISWAPESSYSSISEATGSETKK--SGKPGPFL 311
Score = 144 (55.7 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L+SGS D T+ +W+ L + GH + V F G+ I S + DK++++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
+ + + TL H V + + + +V+GS D T+KVW +
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 63 (27.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
++ GH V V F P + S S D T++ WD T
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET 139
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 238 (88.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 61/203 (30%), Positives = 92/203 (45%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH ++V + F +G+ LAS S D T++ WD + GH H V +A P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+VS ++ I W+ TG + + GH++W+ + P N AS D +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCV-KTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWG------------GS-----G----LIYSASQDR 360
R+W V +C L H V CI W GS G + S S+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 361 TIKVWRASDGVMCRTLEGHAHWV 383
TIK+W S G+ TL GH +WV
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWV 341
Score = 227 (85.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 58/205 (28%), Positives = 93/205 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C +M GH V SV PNG + S S D T++ W+V T + GH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 259 PDSKQLVSGCKNG-VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH--------LNHQC 309
D L++ C N + W +T K+ +R H+ + +SW P +
Sbjct: 244 QDGT-LIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 310 RR------FASSG-KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
++ F SG +D I++WDV C+ L H V + + G I S + D+T
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTL 386
++VW + +TL H H+V +L
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHFVTSL 386
Score = 222 (83.2 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 77/284 (27%), Positives = 131/284 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH ++V + F +G+ LAS S D T++ WD F+C T + N + +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGHDHNVSSVA- 199
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
++P N + +V K +++V+ C + GH E V V+ + +G +A
Sbjct: 200 ----IMP----NGDHIVSASRDKTIKMWEVQ-TGYCVKTFTGHREWVRMVRPNQDGTLIA 250
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S S D TVR W V T+ + H+H V CI+W+P+S + + A S T K+
Sbjct: 251 SCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY------SSISEATGSET-KK 303
Query: 284 IGQP----MRGH-----KQW--------ITAL---SWEPFHLNHQCRRFA-SSGKDGAIR 322
G+P + G K W +T + +W L H +F S D +R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
+WD +C++ L +H VT + + + + + S D+T+KVW
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 214 (80.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 42/129 (32%), Positives = 73/129 (56%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W P +K ++GH+ + V F P ++ SAS D +IK+WD G F TL+GH
Sbjct: 94 WIPRPPEKYA--LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 151
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+V +++ +LL S SAD T+K+W+ + + + + GH V +V P+G+ + S
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 564 KDKVLRLWQ 572
+DK +++W+
Sbjct: 212 RDKTIKMWE 220
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 397 EATSTG--GFKYDPAN--PEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNP 446
E TS G G K DP P K+AL+ +++ P +VS S+D T+ +W
Sbjct: 78 EFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW-- 135
Query: 447 EKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ E R + GH + + F G+++AS S D +IKLWD + + I T+ GH V
Sbjct: 136 DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 195
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
VA + +VS S D T+K+W ++T + GH + V V DG +AS D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 566 KVLRLW 571
+ +R+W
Sbjct: 256 QTVRVW 261
Score = 208 (78.3 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 57/185 (30%), Positives = 90/185 (48%)
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFK---YDPANPEESSK-HALAKYQAQCPE-GE 430
L GH V + + + V A+ K Y+ + E + K H + G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
L S S D T+ LW+ + + + M GH ++ V P+G I SAS DK+IK+W+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
G + T GH + V MV + D L+ S S D T++VW + TK+ + +L H V +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 551 DWAPD 555
WAP+
Sbjct: 283 SWAPE 287
Score = 190 (71.9 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 58/203 (28%), Positives = 90/203 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH V V F P + S S D T++ WD T +GH V I++
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L S + I WD G + + M GH +++++ P + +H S+ +D I
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP-NGDH----IVSASRDKTI 216
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++W+V CV+ T H V +R G LI S S D+T++VW + L H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
Query: 381 HWVNTL--ALSTDYLMRVEATST 401
H V + A + Y EAT +
Sbjct: 277 HVVECISWAPESSYSSISEATGS 299
Score = 186 (70.5 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
+ GH+ V + + P +VS ++ I WD TG + ++GH + +S++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
H + AS D I++WD +C+R + H +V+ + +G I SAS+D+T
Sbjct: 160 ----HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
IK+W G +T GH WV + + D
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Score = 186 (70.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/237 (24%), Positives = 104/237 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C +M GH V SV PNG + S S D T++ W+V T C T + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----CVKT-FTGHREWVR 238
Query: 162 ITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRP---VTRCTSSMPGHAEAVISV--- 213
+ + D + + + ++ V + V K+ ++R V C S P + + IS
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Query: 214 ----KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
K G L SGS D T++ WDV+T L GH +WV + + K ++S
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWD 325
+ + WD K+ + + H+ ++T+L + H+ + +G D +++W+
Sbjct: 359 DKTLRVWDYKN-KRCMKTLNAHEHFVTSLDF------HKTAPYVVTGSVDQTVKVWE 408
Score = 172 (65.6 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 53/187 (28%), Positives = 88/187 (47%)
Query: 335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL--STD 391
L+ H VT + + ++ SAS+D TIKVW G RTL+GH V ++ S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 392 YLMRVEATST---GGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L A T F+ ++ H ++ A P G+ +VS S D T+ +W +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV-AIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ TGH++ + V + DG +IAS S D+++++W + LR H V
Sbjct: 223 TGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 508 VAWSSDS 514
++W+ +S
Sbjct: 282 ISWAPES 288
Score = 171 (65.3 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W PE S++ TG + + G + S S DK+IK+WD G + TL GH
Sbjct: 284 WAPESSYSSISEATGSETK----KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V V + S + ++S + D TL+VW+ K K+ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 564 KDKVLRLWQ 572
D+ +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 56/218 (25%), Positives = 104/218 (47%)
Query: 288 MRGHKQWITALSWEP-FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH+ +T + + P F + S+ +D I++WD R L HT SV I
Sbjct: 104 LSGHRSPVTRVIFHPVFSV------MVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS 157
Query: 347 WGGSG-LIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLAL--STDYLMRVEATST- 401
+ SG L+ S S D TIK+W G C RT+ GH H V+++A+ + D+++ T
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 402 GGFKYDPANPEES-SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
++ ++ + H + +G + S S+D T+ +W K+ A + H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKAELREH 275
Query: 460 QQLINCVEFSPDGRI--IASASFDKSIKLWDGRIGKFI 495
+ ++ C+ ++P+ I+ A+ ++ K G+ G F+
Sbjct: 276 EHVVECISWAPESSYSSISEATGSETKK--SGKPGPFL 311
Score = 144 (55.7 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L+SGS D T+ +W+ L + GH + V F G+ I S + DK++++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
+ + + TL H V + + + +V+GS D T+KVW +
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 63 (27.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
++ GH V V F P + S S D T++ WD T
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET 139
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 238 (88.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 61/203 (30%), Positives = 92/203 (45%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH ++V + F +G+ LAS S D T++ WD + GH H V +A P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+VS ++ I W+ TG + + GH++W+ + P N AS D +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCV-KTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWG------------GS-----G----LIYSASQDR 360
R+W V +C L H V CI W GS G + S S+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 361 TIKVWRASDGVMCRTLEGHAHWV 383
TIK+W S G+ TL GH +WV
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWV 341
Score = 227 (85.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 58/205 (28%), Positives = 93/205 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C +M GH V SV PNG + S S D T++ W+V T + GH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 259 PDSKQLVSGCKNG-VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH--------LNHQC 309
D L++ C N + W +T K+ +R H+ + +SW P +
Sbjct: 244 QDGT-LIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 310 RR------FASSG-KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
++ F SG +D I++WDV C+ L H V + + G I S + D+T
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTL 386
++VW + +TL H H+V +L
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHFVTSL 386
Score = 222 (83.2 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 77/284 (27%), Positives = 131/284 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH ++V + F +G+ LAS S D T++ WD F+C T + N + +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGHDHNVSSVA- 199
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
++P N + +V K +++V+ C + GH E V V+ + +G +A
Sbjct: 200 ----IMP----NGDHIVSASRDKTIKMWEVQ-TGYCVKTFTGHREWVRMVRPNQDGTLIA 250
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S S D TVR W V T+ + H+H V CI+W+P+S + + A S T K+
Sbjct: 251 SCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY------SSISEATGSET-KK 303
Query: 284 IGQP----MRGH-----KQW--------ITAL---SWEPFHLNHQCRRFA-SSGKDGAIR 322
G+P + G K W +T + +W L H +F S D +R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
+WD +C++ L +H VT + + + + + S D+T+KVW
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 214 (80.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 42/129 (32%), Positives = 73/129 (56%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W P +K ++GH+ + V F P ++ SAS D +IK+WD G F TL+GH
Sbjct: 94 WIPRPPEKYA--LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 151
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+V +++ +LL S SAD T+K+W+ + + + + GH V +V P+G+ + S
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 564 KDKVLRLWQ 572
+DK +++W+
Sbjct: 212 RDKTIKMWE 220
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 397 EATSTG--GFKYDPAN--PEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNP 446
E TS G G K DP P K+AL+ +++ P +VS S+D T+ +W
Sbjct: 78 EFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW-- 135
Query: 447 EKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ E R + GH + + F G+++AS S D +IKLWD + + I T+ GH V
Sbjct: 136 DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 195
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
VA + +VS S D T+K+W ++T + GH + V V DG +AS D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 566 KVLRLW 571
+ +R+W
Sbjct: 256 QTVRVW 261
Score = 208 (78.3 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 57/185 (30%), Positives = 90/185 (48%)
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFK---YDPANPEESSK-HALAKYQAQCPE-GE 430
L GH V + + + V A+ K Y+ + E + K H + G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
L S S D T+ LW+ + + + M GH ++ V P+G I SAS DK+IK+W+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
G + T GH + V MV + D L+ S S D T++VW + TK+ + +L H V +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 551 DWAPD 555
WAP+
Sbjct: 283 SWAPE 287
Score = 190 (71.9 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 58/203 (28%), Positives = 90/203 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH V V F P + S S D T++ WD T +GH V I++
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L S + I WD G + + M GH +++++ P + +H S+ +D I
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP-NGDH----IVSASRDKTI 216
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++W+V CV+ T H V +R G LI S S D+T++VW + L H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
Query: 381 HWVNTL--ALSTDYLMRVEATST 401
H V + A + Y EAT +
Sbjct: 277 HVVECISWAPESSYSSISEATGS 299
Score = 186 (70.5 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
+ GH+ V + + P +VS ++ I WD TG + ++GH + +S++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
H + AS D I++WD +C+R + H +V+ + +G I SAS+D+T
Sbjct: 160 ----HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
IK+W G +T GH WV + + D
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Score = 186 (70.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/237 (24%), Positives = 104/237 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C +M GH V SV PNG + S S D T++ W+V T C T + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----CVKT-FTGHREWVR 238
Query: 162 ITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRP---VTRCTSSMPGHAEAVISV--- 213
+ + D + + + ++ V + V K+ ++R V C S P + + IS
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Query: 214 ----KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
K G L SGS D T++ WDV+T L GH +WV + + K ++S
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWD 325
+ + WD K+ + + H+ ++T+L + H+ + +G D +++W+
Sbjct: 359 DKTLRVWDYKN-KRCMKTLNAHEHFVTSLDF------HKTAPYVVTGSVDQTVKVWE 408
Score = 172 (65.6 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 53/187 (28%), Positives = 88/187 (47%)
Query: 335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL--STD 391
L+ H VT + + ++ SAS+D TIKVW G RTL+GH V ++ S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 392 YLMRVEATST---GGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L A T F+ ++ H ++ A P G+ +VS S D T+ +W +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV-AIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ TGH++ + V + DG +IAS S D+++++W + LR H V
Sbjct: 223 TGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 508 VAWSSDS 514
++W+ +S
Sbjct: 282 ISWAPES 288
Score = 171 (65.3 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W PE S++ TG + + G + S S DK+IK+WD G + TL GH
Sbjct: 284 WAPESSYSSISEATGSETK----KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V V + S + ++S + D TL+VW+ K K+ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 564 KDKVLRLWQ 572
D+ +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 56/218 (25%), Positives = 104/218 (47%)
Query: 288 MRGHKQWITALSWEP-FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH+ +T + + P F + S+ +D I++WD R L HT SV I
Sbjct: 104 LSGHRSPVTRVIFHPVFSV------MVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS 157
Query: 347 WGGSG-LIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLAL--STDYLMRVEATST- 401
+ SG L+ S S D TIK+W G C RT+ GH H V+++A+ + D+++ T
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 402 GGFKYDPANPEES-SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
++ ++ + H + +G + S S+D T+ +W K+ A + H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKAELREH 275
Query: 460 QQLINCVEFSPDGRI--IASASFDKSIKLWDGRIGKFI 495
+ ++ C+ ++P+ I+ A+ ++ K G+ G F+
Sbjct: 276 EHVVECISWAPESSYSSISEATGSETKK--SGKPGPFL 311
Score = 144 (55.7 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L+SGS D T+ +W+ L + GH + V F G+ I S + DK++++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
+ + + TL H V + + + +V+GS D T+KVW +
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 63 (27.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
++ GH V V F P + S S D T++ WD T
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET 139
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 238 (88.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 61/203 (30%), Positives = 92/203 (45%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH ++V + F +G+ LAS S D T++ WD + GH H V +A P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+VS ++ I W+ TG + + GH++W+ + P N AS D +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCV-KTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWG------------GS-----G----LIYSASQDR 360
R+W V +C L H V CI W GS G + S S+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 361 TIKVWRASDGVMCRTLEGHAHWV 383
TIK+W S G+ TL GH +WV
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWV 341
Score = 227 (85.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 58/205 (28%), Positives = 93/205 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C +M GH V SV PNG + S S D T++ W+V T + GH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 259 PDSKQLVSGCKNG-VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH--------LNHQC 309
D L++ C N + W +T K+ +R H+ + +SW P +
Sbjct: 244 QDGT-LIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 310 RR------FASSG-KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
++ F SG +D I++WDV C+ L H V + + G I S + D+T
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTL 386
++VW + +TL H H+V +L
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHFVTSL 386
Score = 222 (83.2 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 77/284 (27%), Positives = 131/284 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH ++V + F +G+ LAS S D T++ WD F+C T + N + +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGHDHNVSSVA- 199
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
++P N + +V K +++V+ C + GH E V V+ + +G +A
Sbjct: 200 ----IMP----NGDHIVSASRDKTIKMWEVQ-TGYCVKTFTGHREWVRMVRPNQDGTLIA 250
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S S D TVR W V T+ + H+H V CI+W+P+S + + A S T K+
Sbjct: 251 SCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY------SSISEATGSET-KK 303
Query: 284 IGQP----MRGH-----KQW--------ITAL---SWEPFHLNHQCRRFA-SSGKDGAIR 322
G+P + G K W +T + +W L H +F S D +R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
+WD +C++ L +H VT + + + + + S D+T+KVW
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 214 (80.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 42/129 (32%), Positives = 73/129 (56%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W P +K ++GH+ + V F P ++ SAS D +IK+WD G F TL+GH
Sbjct: 94 WIPRPPEKYA--LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 151
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+V +++ +LL S SAD T+K+W+ + + + + GH V +V P+G+ + S
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 564 KDKVLRLWQ 572
+DK +++W+
Sbjct: 212 RDKTIKMWE 220
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 397 EATSTG--GFKYDPAN--PEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNP 446
E TS G G K DP P K+AL+ +++ P +VS S+D T+ +W
Sbjct: 78 EFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW-- 135
Query: 447 EKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ E R + GH + + F G+++AS S D +IKLWD + + I T+ GH V
Sbjct: 136 DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 195
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
VA + +VS S D T+K+W ++T + GH + V V DG +AS D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 566 KVLRLW 571
+ +R+W
Sbjct: 256 QTVRVW 261
Score = 208 (78.3 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 57/185 (30%), Positives = 90/185 (48%)
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFK---YDPANPEESSK-HALAKYQAQCPE-GE 430
L GH V + + + V A+ K Y+ + E + K H + G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
L S S D T+ LW+ + + + M GH ++ V P+G I SAS DK+IK+W+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
G + T GH + V MV + D L+ S S D T++VW + TK+ + +L H V +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 551 DWAPD 555
WAP+
Sbjct: 283 SWAPE 287
Score = 190 (71.9 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 58/203 (28%), Positives = 90/203 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH V V F P + S S D T++ WD T +GH V I++
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L S + I WD G + + M GH +++++ P + +H S+ +D I
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP-NGDH----IVSASRDKTI 216
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++W+V CV+ T H V +R G LI S S D+T++VW + L H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
Query: 381 HWVNTL--ALSTDYLMRVEATST 401
H V + A + Y EAT +
Sbjct: 277 HVVECISWAPESSYSSISEATGS 299
Score = 186 (70.5 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
+ GH+ V + + P +VS ++ I WD TG + ++GH + +S++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
H + AS D I++WD +C+R + H +V+ + +G I SAS+D+T
Sbjct: 160 ----HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
IK+W G +T GH WV + + D
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Score = 186 (70.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/237 (24%), Positives = 104/237 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C +M GH V SV PNG + S S D T++ W+V T C T + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----CVKT-FTGHREWVR 238
Query: 162 ITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRP---VTRCTSSMPGHAEAVISV--- 213
+ + D + + + ++ V + V K+ ++R V C S P + + IS
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Query: 214 ----KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
K G L SGS D T++ WDV+T L GH +WV + + K ++S
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWD 325
+ + WD K+ + + H+ ++T+L + H+ + +G D +++W+
Sbjct: 359 DKTLRVWDYKN-KRCMKTLNAHEHFVTSLDF------HKTAPYVVTGSVDQTVKVWE 408
Score = 172 (65.6 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 53/187 (28%), Positives = 88/187 (47%)
Query: 335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL--STD 391
L+ H VT + + ++ SAS+D TIKVW G RTL+GH V ++ S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 392 YLMRVEATST---GGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L A T F+ ++ H ++ A P G+ +VS S D T+ +W +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV-AIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ TGH++ + V + DG +IAS S D+++++W + LR H V
Sbjct: 223 TGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 508 VAWSSDS 514
++W+ +S
Sbjct: 282 ISWAPES 288
Score = 171 (65.3 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W PE S++ TG + + G + S S DK+IK+WD G + TL GH
Sbjct: 284 WAPESSYSSISEATGSETK----KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V V + S + ++S + D TL+VW+ K K+ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 564 KDKVLRLWQ 572
D+ +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 56/218 (25%), Positives = 104/218 (47%)
Query: 288 MRGHKQWITALSWEP-FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH+ +T + + P F + S+ +D I++WD R L HT SV I
Sbjct: 104 LSGHRSPVTRVIFHPVFSV------MVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS 157
Query: 347 WGGSG-LIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLAL--STDYLMRVEATST- 401
+ SG L+ S S D TIK+W G C RT+ GH H V+++A+ + D+++ T
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 402 GGFKYDPANPEES-SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
++ ++ + H + +G + S S+D T+ +W K+ A + H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKAELREH 275
Query: 460 QQLINCVEFSPDGRI--IASASFDKSIKLWDGRIGKFI 495
+ ++ C+ ++P+ I+ A+ ++ K G+ G F+
Sbjct: 276 EHVVECISWAPESSYSSISEATGSETKK--SGKPGPFL 311
Score = 144 (55.7 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L+SGS D T+ +W+ L + GH + V F G+ I S + DK++++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
+ + + TL H V + + + +V+GS D T+KVW +
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 63 (27.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
++ GH V V F P + S S D T++ WD T
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET 139
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 238 (88.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 61/203 (30%), Positives = 92/203 (45%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH ++V + F +G+ LAS S D T++ WD + GH H V +A P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+VS ++ I W+ TG + + GH++W+ + P N AS D +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCV-KTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWG------------GS-----G----LIYSASQDR 360
R+W V +C L H V CI W GS G + S S+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 361 TIKVWRASDGVMCRTLEGHAHWV 383
TIK+W S G+ TL GH +WV
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWV 341
Score = 227 (85.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 58/205 (28%), Positives = 93/205 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C +M GH V SV PNG + S S D T++ W+V T + GH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 259 PDSKQLVSGCKNG-VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH--------LNHQC 309
D L++ C N + W +T K+ +R H+ + +SW P +
Sbjct: 244 QDGT-LIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 310 RR------FASSG-KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
++ F SG +D I++WDV C+ L H V + + G I S + D+T
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTL 386
++VW + +TL H H+V +L
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHFVTSL 386
Score = 222 (83.2 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 77/284 (27%), Positives = 131/284 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH ++V + F +G+ LAS S D T++ WD F+C T + N + +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGHDHNVSSVA- 199
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
++P N + +V K +++V+ C + GH E V V+ + +G +A
Sbjct: 200 ----IMP----NGDHIVSASRDKTIKMWEVQ-TGYCVKTFTGHREWVRMVRPNQDGTLIA 250
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S S D TVR W V T+ + H+H V CI+W+P+S + + A S T K+
Sbjct: 251 SCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY------SSISEATGSET-KK 303
Query: 284 IGQP----MRGH-----KQW--------ITAL---SWEPFHLNHQCRRFA-SSGKDGAIR 322
G+P + G K W +T + +W L H +F S D +R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
+WD +C++ L +H VT + + + + + S D+T+KVW
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 214 (80.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 42/129 (32%), Positives = 73/129 (56%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W P +K ++GH+ + V F P ++ SAS D +IK+WD G F TL+GH
Sbjct: 94 WIPRPPEKYA--LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 151
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+V +++ +LL S SAD T+K+W+ + + + + GH V +V P+G+ + S
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 564 KDKVLRLWQ 572
+DK +++W+
Sbjct: 212 RDKTIKMWE 220
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 397 EATSTG--GFKYDPAN--PEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNP 446
E TS G G K DP P K+AL+ +++ P +VS S+D T+ +W
Sbjct: 78 EFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW-- 135
Query: 447 EKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ E R + GH + + F G+++AS S D +IKLWD + + I T+ GH V
Sbjct: 136 DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 195
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
VA + +VS S D T+K+W ++T + GH + V V DG +AS D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 566 KVLRLW 571
+ +R+W
Sbjct: 256 QTVRVW 261
Score = 208 (78.3 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 57/185 (30%), Positives = 90/185 (48%)
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFK---YDPANPEESSK-HALAKYQAQCPE-GE 430
L GH V + + + V A+ K Y+ + E + K H + G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
L S S D T+ LW+ + + + M GH ++ V P+G I SAS DK+IK+W+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
G + T GH + V MV + D L+ S S D T++VW + TK+ + +L H V +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 551 DWAPD 555
WAP+
Sbjct: 283 SWAPE 287
Score = 190 (71.9 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 58/203 (28%), Positives = 90/203 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH V V F P + S S D T++ WD T +GH V I++
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L S + I WD G + + M GH +++++ P + +H S+ +D I
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP-NGDH----IVSASRDKTI 216
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++W+V CV+ T H V +R G LI S S D+T++VW + L H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
Query: 381 HWVNTL--ALSTDYLMRVEATST 401
H V + A + Y EAT +
Sbjct: 277 HVVECISWAPESSYSSISEATGS 299
Score = 186 (70.5 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
+ GH+ V + + P +VS ++ I WD TG + ++GH + +S++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
H + AS D I++WD +C+R + H +V+ + +G I SAS+D+T
Sbjct: 160 ----HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
IK+W G +T GH WV + + D
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Score = 186 (70.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/237 (24%), Positives = 104/237 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C +M GH V SV PNG + S S D T++ W+V T C T + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----CVKT-FTGHREWVR 238
Query: 162 ITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRP---VTRCTSSMPGHAEAVISV--- 213
+ + D + + + ++ V + V K+ ++R V C S P + + IS
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Query: 214 ----KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
K G L SGS D T++ WDV+T L GH +WV + + K ++S
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWD 325
+ + WD K+ + + H+ ++T+L + H+ + +G D +++W+
Sbjct: 359 DKTLRVWDYKN-KRCMKTLNAHEHFVTSLDF------HKTAPYVVTGSVDQTVKVWE 408
Score = 172 (65.6 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 53/187 (28%), Positives = 88/187 (47%)
Query: 335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL--STD 391
L+ H VT + + ++ SAS+D TIKVW G RTL+GH V ++ S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 392 YLMRVEATST---GGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L A T F+ ++ H ++ A P G+ +VS S D T+ +W +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV-AIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ TGH++ + V + DG +IAS S D+++++W + LR H V
Sbjct: 223 TGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 508 VAWSSDS 514
++W+ +S
Sbjct: 282 ISWAPES 288
Score = 171 (65.3 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W PE S++ TG + + G + S S DK+IK+WD G + TL GH
Sbjct: 284 WAPESSYSSISEATGSETK----KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V V + S + ++S + D TL+VW+ K K+ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 564 KDKVLRLWQ 572
D+ +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 56/218 (25%), Positives = 104/218 (47%)
Query: 288 MRGHKQWITALSWEP-FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH+ +T + + P F + S+ +D I++WD R L HT SV I
Sbjct: 104 LSGHRSPVTRVIFHPVFSV------MVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS 157
Query: 347 WGGSG-LIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLAL--STDYLMRVEATST- 401
+ SG L+ S S D TIK+W G C RT+ GH H V+++A+ + D+++ T
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 402 GGFKYDPANPEES-SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
++ ++ + H + +G + S S+D T+ +W K+ A + H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKAELREH 275
Query: 460 QQLINCVEFSPDGRI--IASASFDKSIKLWDGRIGKFI 495
+ ++ C+ ++P+ I+ A+ ++ K G+ G F+
Sbjct: 276 EHVVECISWAPESSYSSISEATGSETKK--SGKPGPFL 311
Score = 144 (55.7 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L+SGS D T+ +W+ L + GH + V F G+ I S + DK++++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
+ + + TL H V + + + +V+GS D T+KVW +
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 63 (27.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
++ GH V V F P + S S D T++ WD T
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET 139
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 238 (88.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 61/203 (30%), Positives = 92/203 (45%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH ++V + F +G+ LAS S D T++ WD + GH H V +A P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+VS ++ I W+ TG + + GH++W+ + P N AS D +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCV-KTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWG------------GS-----G----LIYSASQDR 360
R+W V +C L H V CI W GS G + S S+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 361 TIKVWRASDGVMCRTLEGHAHWV 383
TIK+W S G+ TL GH +WV
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWV 341
Score = 227 (85.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 58/205 (28%), Positives = 93/205 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C +M GH V SV PNG + S S D T++ W+V T + GH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 259 PDSKQLVSGCKNG-VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH--------LNHQC 309
D L++ C N + W +T K+ +R H+ + +SW P +
Sbjct: 244 QDGT-LIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 310 RR------FASSG-KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
++ F SG +D I++WDV C+ L H V + + G I S + D+T
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTL 386
++VW + +TL H H+V +L
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHFVTSL 386
Score = 222 (83.2 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 77/284 (27%), Positives = 131/284 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH ++V + F +G+ LAS S D T++ WD F+C T + N + +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGHDHNVSSVA- 199
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
++P N + +V K +++V+ C + GH E V V+ + +G +A
Sbjct: 200 ----IMP----NGDHIVSASRDKTIKMWEVQ-TGYCVKTFTGHREWVRMVRPNQDGTLIA 250
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S S D TVR W V T+ + H+H V CI+W+P+S + + A S T K+
Sbjct: 251 SCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY------SSISEATGSET-KK 303
Query: 284 IGQP----MRGH-----KQW--------ITAL---SWEPFHLNHQCRRFA-SSGKDGAIR 322
G+P + G K W +T + +W L H +F S D +R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
+WD +C++ L +H VT + + + + + S D+T+KVW
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 214 (80.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 42/129 (32%), Positives = 73/129 (56%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W P +K ++GH+ + V F P ++ SAS D +IK+WD G F TL+GH
Sbjct: 94 WIPRPPEKYA--LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 151
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+V +++ +LL S SAD T+K+W+ + + + + GH V +V P+G+ + S
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 564 KDKVLRLWQ 572
+DK +++W+
Sbjct: 212 RDKTIKMWE 220
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 397 EATSTG--GFKYDPAN--PEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNP 446
E TS G G K DP P K+AL+ +++ P +VS S+D T+ +W
Sbjct: 78 EFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW-- 135
Query: 447 EKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ E R + GH + + F G+++AS S D +IKLWD + + I T+ GH V
Sbjct: 136 DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 195
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
VA + +VS S D T+K+W ++T + GH + V V DG +AS D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 566 KVLRLW 571
+ +R+W
Sbjct: 256 QTVRVW 261
Score = 208 (78.3 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 57/185 (30%), Positives = 90/185 (48%)
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFK---YDPANPEESSK-HALAKYQAQCPE-GE 430
L GH V + + + V A+ K Y+ + E + K H + G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
L S S D T+ LW+ + + + M GH ++ V P+G I SAS DK+IK+W+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
G + T GH + V MV + D L+ S S D T++VW + TK+ + +L H V +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 551 DWAPD 555
WAP+
Sbjct: 283 SWAPE 287
Score = 190 (71.9 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 58/203 (28%), Positives = 90/203 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH V V F P + S S D T++ WD T +GH V I++
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L S + I WD G + + M GH +++++ P + +H S+ +D I
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP-NGDH----IVSASRDKTI 216
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++W+V CV+ T H V +R G LI S S D+T++VW + L H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
Query: 381 HWVNTL--ALSTDYLMRVEATST 401
H V + A + Y EAT +
Sbjct: 277 HVVECISWAPESSYSSISEATGS 299
Score = 186 (70.5 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
+ GH+ V + + P +VS ++ I WD TG + ++GH + +S++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
H + AS D I++WD +C+R + H +V+ + +G I SAS+D+T
Sbjct: 160 ----HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
IK+W G +T GH WV + + D
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Score = 186 (70.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/237 (24%), Positives = 104/237 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C +M GH V SV PNG + S S D T++ W+V T C T + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----CVKT-FTGHREWVR 238
Query: 162 ITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRP---VTRCTSSMPGHAEAVISV--- 213
+ + D + + + ++ V + V K+ ++R V C S P + + IS
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Query: 214 ----KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
K G L SGS D T++ WDV+T L GH +WV + + K ++S
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWD 325
+ + WD K+ + + H+ ++T+L + H+ + +G D +++W+
Sbjct: 359 DKTLRVWDYKN-KRCMKTLNAHEHFVTSLDF------HKTAPYVVTGSVDQTVKVWE 408
Score = 172 (65.6 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 53/187 (28%), Positives = 88/187 (47%)
Query: 335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL--STD 391
L+ H VT + + ++ SAS+D TIKVW G RTL+GH V ++ S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 392 YLMRVEATST---GGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L A T F+ ++ H ++ A P G+ +VS S D T+ +W +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV-AIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ TGH++ + V + DG +IAS S D+++++W + LR H V
Sbjct: 223 TGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 508 VAWSSDS 514
++W+ +S
Sbjct: 282 ISWAPES 288
Score = 171 (65.3 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W PE S++ TG + + G + S S DK+IK+WD G + TL GH
Sbjct: 284 WAPESSYSSISEATGSETK----KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V V + S + ++S + D TL+VW+ K K+ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 564 KDKVLRLWQ 572
D+ +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 56/218 (25%), Positives = 104/218 (47%)
Query: 288 MRGHKQWITALSWEP-FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH+ +T + + P F + S+ +D I++WD R L HT SV I
Sbjct: 104 LSGHRSPVTRVIFHPVFSV------MVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS 157
Query: 347 WGGSG-LIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLAL--STDYLMRVEATST- 401
+ SG L+ S S D TIK+W G C RT+ GH H V+++A+ + D+++ T
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 402 GGFKYDPANPEES-SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
++ ++ + H + +G + S S+D T+ +W K+ A + H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKAELREH 275
Query: 460 QQLINCVEFSPDGRI--IASASFDKSIKLWDGRIGKFI 495
+ ++ C+ ++P+ I+ A+ ++ K G+ G F+
Sbjct: 276 EHVVECISWAPESSYSSISEATGSETKK--SGKPGPFL 311
Score = 144 (55.7 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L+SGS D T+ +W+ L + GH + V F G+ I S + DK++++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
+ + + TL H V + + + +V+GS D T+KVW +
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 63 (27.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
++ GH V V F P + S S D T++ WD T
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET 139
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 238 (88.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 61/203 (30%), Positives = 92/203 (45%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH ++V + F +G+ LAS S D T++ WD + GH H V +A P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+VS ++ I W+ TG + + GH++W+ + P N AS D +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCV-KTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWG------------GS-----G----LIYSASQDR 360
R+W V +C L H V CI W GS G + S S+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 361 TIKVWRASDGVMCRTLEGHAHWV 383
TIK+W S G+ TL GH +WV
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWV 341
Score = 227 (85.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 58/205 (28%), Positives = 93/205 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C +M GH V SV PNG + S S D T++ W+V T + GH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 259 PDSKQLVSGCKNG-VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH--------LNHQC 309
D L++ C N + W +T K+ +R H+ + +SW P +
Sbjct: 244 QDGT-LIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 310 RR------FASSG-KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
++ F SG +D I++WDV C+ L H V + + G I S + D+T
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTL 386
++VW + +TL H H+V +L
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHFVTSL 386
Score = 222 (83.2 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 77/284 (27%), Positives = 131/284 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH ++V + F +G+ LAS S D T++ WD F+C T + N + +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGHDHNVSSVA- 199
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
++P N + +V K +++V+ C + GH E V V+ + +G +A
Sbjct: 200 ----IMP----NGDHIVSASRDKTIKMWEVQ-TGYCVKTFTGHREWVRMVRPNQDGTLIA 250
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S S D TVR W V T+ + H+H V CI+W+P+S + + A S T K+
Sbjct: 251 SCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY------SSISEATGSET-KK 303
Query: 284 IGQP----MRGH-----KQW--------ITAL---SWEPFHLNHQCRRFA-SSGKDGAIR 322
G+P + G K W +T + +W L H +F S D +R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
+WD +C++ L +H VT + + + + + S D+T+KVW
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 214 (80.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 42/129 (32%), Positives = 73/129 (56%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W P +K ++GH+ + V F P ++ SAS D +IK+WD G F TL+GH
Sbjct: 94 WIPRPPEKYA--LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 151
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+V +++ +LL S SAD T+K+W+ + + + + GH V +V P+G+ + S
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 564 KDKVLRLWQ 572
+DK +++W+
Sbjct: 212 RDKTIKMWE 220
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 397 EATSTG--GFKYDPAN--PEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNP 446
E TS G G K DP P K+AL+ +++ P +VS S+D T+ +W
Sbjct: 78 EFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW-- 135
Query: 447 EKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ E R + GH + + F G+++AS S D +IKLWD + + I T+ GH V
Sbjct: 136 DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 195
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
VA + +VS S D T+K+W ++T + GH + V V DG +AS D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 566 KVLRLW 571
+ +R+W
Sbjct: 256 QTVRVW 261
Score = 208 (78.3 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 57/185 (30%), Positives = 90/185 (48%)
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFK---YDPANPEESSK-HALAKYQAQCPE-GE 430
L GH V + + + V A+ K Y+ + E + K H + G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
L S S D T+ LW+ + + + M GH ++ V P+G I SAS DK+IK+W+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
G + T GH + V MV + D L+ S S D T++VW + TK+ + +L H V +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 551 DWAPD 555
WAP+
Sbjct: 283 SWAPE 287
Score = 190 (71.9 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 58/203 (28%), Positives = 90/203 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH V V F P + S S D T++ WD T +GH V I++
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L S + I WD G + + M GH +++++ P + +H S+ +D I
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP-NGDH----IVSASRDKTI 216
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++W+V CV+ T H V +R G LI S S D+T++VW + L H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
Query: 381 HWVNTL--ALSTDYLMRVEATST 401
H V + A + Y EAT +
Sbjct: 277 HVVECISWAPESSYSSISEATGS 299
Score = 186 (70.5 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
+ GH+ V + + P +VS ++ I WD TG + ++GH + +S++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
H + AS D I++WD +C+R + H +V+ + +G I SAS+D+T
Sbjct: 160 ----HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
IK+W G +T GH WV + + D
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Score = 186 (70.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/237 (24%), Positives = 104/237 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C +M GH V SV PNG + S S D T++ W+V T C T + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----CVKT-FTGHREWVR 238
Query: 162 ITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRP---VTRCTSSMPGHAEAVISV--- 213
+ + D + + + ++ V + V K+ ++R V C S P + + IS
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Query: 214 ----KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
K G L SGS D T++ WDV+T L GH +WV + + K ++S
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWD 325
+ + WD K+ + + H+ ++T+L + H+ + +G D +++W+
Sbjct: 359 DKTLRVWDYKN-KRCMKTLNAHEHFVTSLDF------HKTAPYVVTGSVDQTVKVWE 408
Score = 172 (65.6 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 53/187 (28%), Positives = 88/187 (47%)
Query: 335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL--STD 391
L+ H VT + + ++ SAS+D TIKVW G RTL+GH V ++ S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 392 YLMRVEATST---GGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L A T F+ ++ H ++ A P G+ +VS S D T+ +W +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV-AIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ TGH++ + V + DG +IAS S D+++++W + LR H V
Sbjct: 223 TGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 508 VAWSSDS 514
++W+ +S
Sbjct: 282 ISWAPES 288
Score = 171 (65.3 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W PE S++ TG + + G + S S DK+IK+WD G + TL GH
Sbjct: 284 WAPESSYSSISEATGSETK----KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V V + S + ++S + D TL+VW+ K K+ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 564 KDKVLRLWQ 572
D+ +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 56/218 (25%), Positives = 104/218 (47%)
Query: 288 MRGHKQWITALSWEP-FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH+ +T + + P F + S+ +D I++WD R L HT SV I
Sbjct: 104 LSGHRSPVTRVIFHPVFSV------MVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS 157
Query: 347 WGGSG-LIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLAL--STDYLMRVEATST- 401
+ SG L+ S S D TIK+W G C RT+ GH H V+++A+ + D+++ T
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 402 GGFKYDPANPEES-SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
++ ++ + H + +G + S S+D T+ +W K+ A + H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKAELREH 275
Query: 460 QQLINCVEFSPDGRI--IASASFDKSIKLWDGRIGKFI 495
+ ++ C+ ++P+ I+ A+ ++ K G+ G F+
Sbjct: 276 EHVVECISWAPESSYSSISEATGSETKK--SGKPGPFL 311
Score = 144 (55.7 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L+SGS D T+ +W+ L + GH + V F G+ I S + DK++++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
+ + + TL H V + + + +V+GS D T+KVW +
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 63 (27.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
++ GH V V F P + S S D T++ WD T
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET 139
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 238 (88.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 61/203 (30%), Positives = 92/203 (45%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH ++V + F +G+ LAS S D T++ WD + GH H V +A P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+VS ++ I W+ TG + + GH++W+ + P N AS D +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCV-KTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWG------------GS-----G----LIYSASQDR 360
R+W V +C L H V CI W GS G + S S+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 361 TIKVWRASDGVMCRTLEGHAHWV 383
TIK+W S G+ TL GH +WV
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWV 341
Score = 227 (85.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 58/205 (28%), Positives = 93/205 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C +M GH V SV PNG + S S D T++ W+V T + GH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 259 PDSKQLVSGCKNG-VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH--------LNHQC 309
D L++ C N + W +T K+ +R H+ + +SW P +
Sbjct: 244 QDGT-LIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 310 RR------FASSG-KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
++ F SG +D I++WDV C+ L H V + + G I S + D+T
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTL 386
++VW + +TL H H+V +L
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHFVTSL 386
Score = 222 (83.2 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 77/284 (27%), Positives = 131/284 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH ++V + F +G+ LAS S D T++ WD F+C T + N + +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGHDHNVSSVA- 199
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
++P N + +V K +++V+ C + GH E V V+ + +G +A
Sbjct: 200 ----IMP----NGDHIVSASRDKTIKMWEVQ-TGYCVKTFTGHREWVRMVRPNQDGTLIA 250
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S S D TVR W V T+ + H+H V CI+W+P+S + + A S T K+
Sbjct: 251 SCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY------SSISEATGSET-KK 303
Query: 284 IGQP----MRGH-----KQW--------ITAL---SWEPFHLNHQCRRFA-SSGKDGAIR 322
G+P + G K W +T + +W L H +F S D +R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
+WD +C++ L +H VT + + + + + S D+T+KVW
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 214 (80.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 42/129 (32%), Positives = 73/129 (56%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W P +K ++GH+ + V F P ++ SAS D +IK+WD G F TL+GH
Sbjct: 94 WIPRPPEKYA--LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 151
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+V +++ +LL S SAD T+K+W+ + + + + GH V +V P+G+ + S
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 564 KDKVLRLWQ 572
+DK +++W+
Sbjct: 212 RDKTIKMWE 220
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 397 EATSTG--GFKYDPAN--PEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNP 446
E TS G G K DP P K+AL+ +++ P +VS S+D T+ +W
Sbjct: 78 EFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW-- 135
Query: 447 EKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ E R + GH + + F G+++AS S D +IKLWD + + I T+ GH V
Sbjct: 136 DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 195
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
VA + +VS S D T+K+W ++T + GH + V V DG +AS D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 566 KVLRLW 571
+ +R+W
Sbjct: 256 QTVRVW 261
Score = 208 (78.3 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 57/185 (30%), Positives = 90/185 (48%)
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFK---YDPANPEESSK-HALAKYQAQCPE-GE 430
L GH V + + + V A+ K Y+ + E + K H + G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
L S S D T+ LW+ + + + M GH ++ V P+G I SAS DK+IK+W+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
G + T GH + V MV + D L+ S S D T++VW + TK+ + +L H V +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 551 DWAPD 555
WAP+
Sbjct: 283 SWAPE 287
Score = 190 (71.9 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 58/203 (28%), Positives = 90/203 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH V V F P + S S D T++ WD T +GH V I++
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L S + I WD G + + M GH +++++ P + +H S+ +D I
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP-NGDH----IVSASRDKTI 216
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++W+V CV+ T H V +R G LI S S D+T++VW + L H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
Query: 381 HWVNTL--ALSTDYLMRVEATST 401
H V + A + Y EAT +
Sbjct: 277 HVVECISWAPESSYSSISEATGS 299
Score = 186 (70.5 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
+ GH+ V + + P +VS ++ I WD TG + ++GH + +S++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
H + AS D I++WD +C+R + H +V+ + +G I SAS+D+T
Sbjct: 160 ----HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
IK+W G +T GH WV + + D
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Score = 186 (70.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/237 (24%), Positives = 104/237 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C +M GH V SV PNG + S S D T++ W+V T C T + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----CVKT-FTGHREWVR 238
Query: 162 ITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRP---VTRCTSSMPGHAEAVISV--- 213
+ + D + + + ++ V + V K+ ++R V C S P + + IS
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Query: 214 ----KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
K G L SGS D T++ WDV+T L GH +WV + + K ++S
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWD 325
+ + WD K+ + + H+ ++T+L + H+ + +G D +++W+
Sbjct: 359 DKTLRVWDYKN-KRCMKTLNAHEHFVTSLDF------HKTAPYVVTGSVDQTVKVWE 408
Score = 172 (65.6 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 53/187 (28%), Positives = 88/187 (47%)
Query: 335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL--STD 391
L+ H VT + + ++ SAS+D TIKVW G RTL+GH V ++ S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 392 YLMRVEATST---GGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L A T F+ ++ H ++ A P G+ +VS S D T+ +W +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV-AIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ TGH++ + V + DG +IAS S D+++++W + LR H V
Sbjct: 223 TGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 508 VAWSSDS 514
++W+ +S
Sbjct: 282 ISWAPES 288
Score = 171 (65.3 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W PE S++ TG + + G + S S DK+IK+WD G + TL GH
Sbjct: 284 WAPESSYSSISEATGSETK----KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V V + S + ++S + D TL+VW+ K K+ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 564 KDKVLRLWQ 572
D+ +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 56/218 (25%), Positives = 104/218 (47%)
Query: 288 MRGHKQWITALSWEP-FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH+ +T + + P F + S+ +D I++WD R L HT SV I
Sbjct: 104 LSGHRSPVTRVIFHPVFSV------MVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS 157
Query: 347 WGGSG-LIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLAL--STDYLMRVEATST- 401
+ SG L+ S S D TIK+W G C RT+ GH H V+++A+ + D+++ T
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 402 GGFKYDPANPEES-SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
++ ++ + H + +G + S S+D T+ +W K+ A + H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKAELREH 275
Query: 460 QQLINCVEFSPDGRI--IASASFDKSIKLWDGRIGKFI 495
+ ++ C+ ++P+ I+ A+ ++ K G+ G F+
Sbjct: 276 EHVVECISWAPESSYSSISEATGSETKK--SGKPGPFL 311
Score = 144 (55.7 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L+SGS D T+ +W+ L + GH + V F G+ I S + DK++++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
+ + + TL H V + + + +V+GS D T+KVW +
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 63 (27.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
++ GH V V F P + S S D T++ WD T
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET 139
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 238 (88.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 61/203 (30%), Positives = 92/203 (45%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH ++V + F +G+ LAS S D T++ WD + GH H V +A P+
Sbjct: 145 TLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+VS ++ I W+ TG + + GH++W+ + P N AS D +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCV-KTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWG------------GS-----G----LIYSASQDR 360
R+W V +C L H V CI W GS G + S S+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 361 TIKVWRASDGVMCRTLEGHAHWV 383
TIK+W S G+ TL GH +WV
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWV 341
Score = 227 (85.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 58/205 (28%), Positives = 93/205 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C +M GH V SV PNG + S S D T++ W+V T + GH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 259 PDSKQLVSGCKNG-VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH--------LNHQC 309
D L++ C N + W +T K+ +R H+ + +SW P +
Sbjct: 244 QDGT-LIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 310 RR------FASSG-KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
++ F SG +D I++WDV C+ L H V + + G I S + D+T
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTL 386
++VW + +TL H H+V +L
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHFVTSL 386
Score = 222 (83.2 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 77/284 (27%), Positives = 131/284 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH ++V + F +G+ LAS S D T++ WD F+C T + N + +
Sbjct: 145 TLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGHDHNVSSVA- 199
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
++P N + +V K +++V+ C + GH E V V+ + +G +A
Sbjct: 200 ----IMP----NGDHIVSASRDKTIKMWEVQ-TGYCVKTFTGHREWVRMVRPNQDGTLIA 250
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S S D TVR W V T+ + H+H V CI+W+P+S + + A S T K+
Sbjct: 251 SCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY------SSISEATGSET-KK 303
Query: 284 IGQP----MRGH-----KQW--------ITAL---SWEPFHLNHQCRRFA-SSGKDGAIR 322
G+P + G K W +T + +W L H +F S D +R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
+WD +C++ L +H VT + + + + + S D+T+KVW
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 42/129 (32%), Positives = 73/129 (56%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W P +K ++GH+ + V F P ++ SAS D +IK+WD G F TL+GH
Sbjct: 94 WIPRPPEKYA--LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 151
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+V +++ +LL S SAD T+K+W+ + + + + GH V +V P+G+ + S
Sbjct: 152 SVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 564 KDKVLRLWQ 572
+DK +++W+
Sbjct: 212 RDKTIKMWE 220
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 397 EATSTG--GFKYDPAN--PEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNP 446
E TS G G K DP P K+AL+ +++ P +VS S+D T+ +W
Sbjct: 78 EFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW-- 135
Query: 447 EKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ E R + GH + + F G+++AS S D +IKLWD + + I T+ GH V
Sbjct: 136 DYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 195
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
VA + +VS S D T+K+W ++T + GH + V V DG +AS D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 566 KVLRLW 571
+ +R+W
Sbjct: 256 QTVRVW 261
Score = 207 (77.9 bits), Expect = 9.7e-14, P = 9.7e-14
Identities = 57/185 (30%), Positives = 90/185 (48%)
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFK---YDPANPEESSK-HALAKYQAQCPE-GE 430
L GH V + + + V A+ K Y+ + E + K H + G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
L S S D T+ LW+ + + + M GH ++ V P+G I SAS DK+IK+W+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
G + T GH + V MV + D L+ S S D T++VW + TK+ + +L H V +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 551 DWAPD 555
WAP+
Sbjct: 283 SWAPE 287
Score = 189 (71.6 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 58/203 (28%), Positives = 90/203 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH V V F P + S S D T++ WD T +GH V I++
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSG 162
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L S + I WD G + + M GH +++++ P + +H S+ +D I
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP-NGDH----IVSASRDKTI 216
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++W+V CV+ T H V +R G LI S S D+T++VW + L H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
Query: 381 HWVNTL--ALSTDYLMRVEATST 401
H V + A + Y EAT +
Sbjct: 277 HVVECISWAPESSYSSISEATGS 299
Score = 186 (70.5 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
+ GH+ V + + P +VS ++ I WD TG + ++GH + +S++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVEDISFD- 159
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
H + AS D I++WD +C+R + H +V+ + +G I SAS+D+T
Sbjct: 160 ----HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
IK+W G +T GH WV + + D
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Score = 186 (70.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/237 (24%), Positives = 104/237 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C +M GH V SV PNG + S S D T++ W+V T C T + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----CVKT-FTGHREWVR 238
Query: 162 ITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRP---VTRCTSSMPGHAEAVISV--- 213
+ + D + + + ++ V + V K+ ++R V C S P + + IS
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Query: 214 ----KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
K G L SGS D T++ WDV+T L GH +WV + + K ++S
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWD 325
+ + WD K+ + + H+ ++T+L + H+ + +G D +++W+
Sbjct: 359 DKTLRVWDYKN-KRCMKTLNAHEHFVTSLDF------HKTAPYVVTGSVDQTVKVWE 408
Score = 172 (65.6 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 53/187 (28%), Positives = 88/187 (47%)
Query: 335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL--STD 391
L+ H VT + + ++ SAS+D TIKVW G RTL+GH V ++ S
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 392 YLMRVEATST---GGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L A T F+ ++ H ++ A P G+ +VS S D T+ +W +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV-AIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ TGH++ + V + DG +IAS S D+++++W + LR H V
Sbjct: 223 TGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 508 VAWSSDS 514
++W+ +S
Sbjct: 282 ISWAPES 288
Score = 171 (65.3 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W PE S++ TG + + G + S S DK+IK+WD G + TL GH
Sbjct: 284 WAPESSYSSISEATGSETK----KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V V + S + ++S + D TL+VW+ K K+ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 564 KDKVLRLWQ 572
D+ +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 56/218 (25%), Positives = 104/218 (47%)
Query: 288 MRGHKQWITALSWEP-FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH+ +T + + P F + S+ +D I++WD R L HT SV I
Sbjct: 104 LSGHRSPVTRVIFHPVFSV------MVSASEDATIKVWDYETGDFERTLKGHTDSVEDIS 157
Query: 347 WGGSG-LIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLAL--STDYLMRVEATST- 401
+ SG L+ S S D TIK+W G C RT+ GH H V+++A+ + D+++ T
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 402 GGFKYDPANPEES-SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
++ ++ + H + +G + S S+D T+ +W K+ A + H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKAELREH 275
Query: 460 QQLINCVEFSPDGRI--IASASFDKSIKLWDGRIGKFI 495
+ ++ C+ ++P+ I+ A+ ++ K G+ G F+
Sbjct: 276 EHVVECISWAPESSYSSISEATGSETKK--SGKPGPFL 311
Score = 144 (55.7 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L+SGS D T+ +W+ L + GH + V F G+ I S + DK++++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
+ + + TL H V + + + +V+GS D T+KVW +
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 63 (27.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
++ GH V V F P + S S D T++ WD T
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET 139
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 292 (107.8 bits), Expect = 4.5e-25, P = 4.5e-25
Identities = 83/304 (27%), Positives = 148/304 (48%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRF-ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH + I++ + P C ++ +S D ++IW++ C R LT H V I
Sbjct: 83 LEGHTKSISSAKFSP------CGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 347 WGG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV--------NTLALST--DYLMR 395
W S + SAS D+T+K++ M +TL+GH ++V ++L +S D +R
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 396 VEATSTGG-FKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
+ TG K PA+ + S + + +G + SGS D + +W+ +
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNR------DGSLIASGSYDGLVRIWDTANGQCIKT 250
Query: 455 RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS--- 511
+ + V+FSP+G+ I +++ D ++KLWD GK + GH + Y + +
Sbjct: 251 LVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSV 310
Query: 512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLR 569
+ + ++SGS D + +WN++T++I Q L GH V A D P +ASG D +
Sbjct: 311 TGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIH 370
Query: 570 LWQN 573
+W++
Sbjct: 371 IWRS 374
Score = 249 (92.7 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 74/285 (25%), Positives = 125/285 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT--PYLFYVNE 159
CT + GH +++ S KFSP G+ L + S D TV+ W++ CE T + VN+
Sbjct: 81 CT--LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMI----CERTLTGHKLGVND 134
Query: 160 TEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNG 219
+ V+ T ++ +IV +R T ++ GH V F+P
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIV-----------TSRMTKTLKGHNNYVFCCNFNPQS 183
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ SGS D +VR WDV T + H V ++++ D + SG +G++ WD++
Sbjct: 184 SLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA 243
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT 339
G+ I + + + + P + +S D +++WD + ++ T H
Sbjct: 244 NGQCIKTLVDDENPPVAFVKFSP-----NGKYILASNLDSTLKLWDFSKGKTLKQYTGHE 298
Query: 340 RSVTCIR-----WGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
S CI GG +I S S+D I +W + + LEGH
Sbjct: 299 NSKYCIFANFSVTGGKWII-SGSEDCKIYIWNLQTREIVQCLEGH 342
Score = 224 (83.9 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 46/123 (37%), Positives = 74/123 (60%)
Query: 451 KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW--DGRIGKFITTLRGHVQAVYMV 508
K + + GH + I+ +FSP G+ + ++S DK++K+W D I + TL GH V +
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICE--RTLTGHKLGVNDI 135
Query: 509 AWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
AWSSDSR +VS S D TLK++ + T ++ + L GH + V+ ++ P V SG D+ +
Sbjct: 136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 569 RLW 571
R+W
Sbjct: 196 RIW 198
Score = 155 (59.6 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 58/241 (24%), Positives = 104/241 (43%)
Query: 93 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTP 152
+F++ +R T ++ GH V F+P + SGS D +VR WDV T C T
Sbjct: 155 IFEI-VTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGM----CIKT- 208
Query: 153 YLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT--RCTSSMPGHAEAV 210
+D + + N + + + ++ +C ++
Sbjct: 209 ----------LPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPP 258
Query: 211 IS-VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS---PDSKQLVS 266
++ VKFSPNG+ + + + D+T++ WD + L + GH++ CI + K ++S
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIIS 318
Query: 267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK---DGAIRI 323
G ++ I+ W+ T ++I Q + GH Q + A P + +SG D I I
Sbjct: 319 GSEDCKIYIWNLQT-REIVQCLEGHTQPVLASDCHPV------QNIIASGALEPDNKIHI 371
Query: 324 W 324
W
Sbjct: 372 W 372
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 493 KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDW 552
K + TL GH +++ +S + L + SAD T+K+WNM E+ L GH V + W
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAW 137
Query: 553 APDGEKVASGGKDKVLRLWQ 572
+ D V S DK L++++
Sbjct: 138 SSDSRCVVSASDDKTLKIFE 157
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 292 (107.8 bits), Expect = 4.5e-25, P = 4.5e-25
Identities = 83/304 (27%), Positives = 148/304 (48%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRF-ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH + I++ + P C ++ +S D ++IW++ C R LT H V I
Sbjct: 83 LEGHTKSISSAKFSP------CGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 347 WGG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV--------NTLALST--DYLMR 395
W S + SAS D+T+K++ M +TL+GH ++V ++L +S D +R
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 396 VEATSTGG-FKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
+ TG K PA+ + S + + +G + SGS D + +W+ +
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNR------DGSLIASGSYDGLVRIWDTANGQCIKT 250
Query: 455 RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS--- 511
+ + V+FSP+G+ I +++ D ++KLWD GK + GH + Y + +
Sbjct: 251 LVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSV 310
Query: 512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLR 569
+ + ++SGS D + +WN++T++I Q L GH V A D P +ASG D +
Sbjct: 311 TGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIH 370
Query: 570 LWQN 573
+W++
Sbjct: 371 IWRS 374
Score = 249 (92.7 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 74/285 (25%), Positives = 125/285 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT--PYLFYVNE 159
CT + GH +++ S KFSP G+ L + S D TV+ W++ CE T + VN+
Sbjct: 81 CT--LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMI----CERTLTGHKLGVND 134
Query: 160 TEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNG 219
+ V+ T ++ +IV +R T ++ GH V F+P
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIV-----------TSRMTKTLKGHNNYVFCCNFNPQS 183
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ SGS D +VR WDV T + H V ++++ D + SG +G++ WD++
Sbjct: 184 SLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA 243
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT 339
G+ I + + + + P + +S D +++WD + ++ T H
Sbjct: 244 NGQCIKTLVDDENPPVAFVKFSP-----NGKYILASNLDSTLKLWDFSKGKTLKQYTGHE 298
Query: 340 RSVTCIR-----WGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
S CI GG +I S S+D I +W + + LEGH
Sbjct: 299 NSKYCIFANFSVTGGKWII-SGSEDCKIYIWNLQTREIVQCLEGH 342
Score = 224 (83.9 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 46/123 (37%), Positives = 74/123 (60%)
Query: 451 KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW--DGRIGKFITTLRGHVQAVYMV 508
K + + GH + I+ +FSP G+ + ++S DK++K+W D I + TL GH V +
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICE--RTLTGHKLGVNDI 135
Query: 509 AWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
AWSSDSR +VS S D TLK++ + T ++ + L GH + V+ ++ P V SG D+ +
Sbjct: 136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 569 RLW 571
R+W
Sbjct: 196 RIW 198
Score = 155 (59.6 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 58/241 (24%), Positives = 104/241 (43%)
Query: 93 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTP 152
+F++ +R T ++ GH V F+P + SGS D +VR WDV T C T
Sbjct: 155 IFEI-VTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGM----CIKT- 208
Query: 153 YLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT--RCTSSMPGHAEAV 210
+D + + N + + + ++ +C ++
Sbjct: 209 ----------LPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPP 258
Query: 211 IS-VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS---PDSKQLVS 266
++ VKFSPNG+ + + + D+T++ WD + L + GH++ CI + K ++S
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIIS 318
Query: 267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK---DGAIRI 323
G ++ I+ W+ T ++I Q + GH Q + A P + +SG D I I
Sbjct: 319 GSEDCKIYIWNLQT-REIVQCLEGHTQPVLASDCHPV------QNIIASGALEPDNKIHI 371
Query: 324 W 324
W
Sbjct: 372 W 372
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 493 KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDW 552
K + TL GH +++ +S + L + SAD T+K+WNM E+ L GH V + W
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAW 137
Query: 553 APDGEKVASGGKDKVLRLWQ 572
+ D V S DK L++++
Sbjct: 138 SSDSRCVVSASDDKTLKIFE 157
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 291 (107.5 bits), Expect = 5.7e-25, P = 5.7e-25
Identities = 74/291 (25%), Positives = 140/291 (48%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
+GH+ +T + + F++ ++ AS D + +W + T H +VTC+ +
Sbjct: 47 KGHRDAVTCVDFS-FNM----KQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 101
Query: 349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
SG L+ S S+D+T+++W + H V ++ +D V A+ K
Sbjct: 102 PSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVW 161
Query: 408 PANPEES----SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL 462
+ ++ S+H + P+G +VS SDD T+ LW+ + ++ + H
Sbjct: 162 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGF 220
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
+ V+F P G +A+A D ++K+WD R + + + H AV +++ LV+ S+
Sbjct: 221 VTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASS 280
Query: 523 DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
DSTLK+ ++ ++ L GH V ++ GE ASGG D+ + +W++
Sbjct: 281 DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 331
Score = 278 (102.9 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 79/291 (27%), Positives = 128/291 (43%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF-H 304
+GH+ V C+ +S + KQL SG + + W + + GHK +T +++ P H
Sbjct: 47 KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYR-FTGHKDAVTCVNFSPSGH 105
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIK 363
L AS +D +RIW + V +HT +V + + G + +AS D+TIK
Sbjct: 106 L------LASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIK 159
Query: 364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE---ESSKHA- 418
VW +L H +WV S D + V A+ K +D + E +H
Sbjct: 160 VWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 219
Query: 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
Y P G + + D T+ +W+ + + L H +N + F P G + +A
Sbjct: 220 FVTYVDFHPSGTCVAAAGMDNTVKVWDV-RTHRLLQHYQLHSAAVNALSFHPSGNYLVTA 278
Query: 479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
S D ++K+ D G+ + TL GH VA+S SG +D + VW
Sbjct: 279 SSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 249 (92.7 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 76/289 (26%), Positives = 120/289 (41%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH +AV V FS N + LASGS D+ + W + Q+ ++ GHK V C+ +SP L
Sbjct: 48 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 107
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
SG ++ + W + K R H + ++ H + F ++ D I++W
Sbjct: 108 ASGSRDKTVRIWVPNI-KGESTVFRAHTATVRSV-----HFCSDGQSFVTASDDKTIKVW 161
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
+ + L+ H V C ++ G LI SAS D+T+K+W + + H +V
Sbjct: 162 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 221
Query: 384 NTLALSTDYLMRVEATSTGGFKYDPANPEESSKH-----ALAKYQAQCPEGEKLVSGSDD 438
+ A K +H A + P G LV+ S D
Sbjct: 222 TYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSD 281
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
TL + + E + L + GHQ V FS G AS D+ + +W
Sbjct: 282 STLKILDL-MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 242 (90.2 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 65/244 (26%), Positives = 112/244 (45%)
Query: 333 RVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS-T 390
R H +VTC+ + + S S D + VW GH V + S +
Sbjct: 44 RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 103
Query: 391 DYLMRVEATSTGGFKYDPANPEESS---KH-ALAKYQAQCPEGEKLVSGSDDFTLFLWNP 446
+L+ + + P ES+ H A + C +G+ V+ SDD T+ +W+
Sbjct: 104 GHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWST 163
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
++K L ++ H + C +FSPDGR+I SAS DK++KLWD + + + H V
Sbjct: 164 HRQK-FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 222
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
V + + + D+T+KVW+++T ++ Q H V A+ + P G + + D
Sbjct: 223 YVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 282
Query: 567 VLRL 570
L++
Sbjct: 283 TLKI 286
Score = 236 (88.1 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 73/284 (25%), Positives = 129/284 (45%)
Query: 93 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTP 152
V+ ++P +R GH +AV V FSP+G LASGS D TVR W P K E T
Sbjct: 76 VWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-----VPNIKGESTV 129
Query: 153 YLFYVNETEITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRPVTRCTSSMPGHAEAV 210
+ + +D T + ++ + + ++++ +F S+ H V
Sbjct: 130 FRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLF----------SLSQHINWV 179
Query: 211 ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-CEGHKHWVLCIAWSPDSKQLVSGCK 269
KFSP+GR + S S D TV+ WD T++ + CE H +V + + P + +
Sbjct: 180 RCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-HGGFVTYVDFHPSGTCVAAAGM 238
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS 329
+ + WD T + + Q + H + ALS+ P N+ ++ D ++I D++
Sbjct: 239 DNTVKVWDVRTHRLL-QHYQLHSAAVNALSFHPSG-NY----LVTASSDSTLKILDLMEG 292
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVM 372
+ + L H T + + +G + S D + VW+++ V+
Sbjct: 293 RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDVI 336
Score = 174 (66.3 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 52/195 (26%), Positives = 84/195 (43%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH +AV V FS N + LASGS D+ + W + Q+ ++ G ++ +T
Sbjct: 48 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTG-------HKDAVT--CV 98
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
+ P L D K V + ++ H V SV F +G+S + S
Sbjct: 99 NFSPSGHLLASGSRD----KTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASD 154
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
D T++ W Q LF H +WV C +SPD + +VS + + WD T ++
Sbjct: 155 DKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK-TSRECVHS 213
Query: 288 MRGHKQWITALSWEP 302
H ++T + + P
Sbjct: 214 YCEHGGFVTYVDFHP 228
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 38/125 (30%), Positives = 59/125 (47%)
Query: 448 KEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
+E SL R GH+ + CV+FS + + +AS S D + +W + GH AV
Sbjct: 37 QEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVT 96
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
V +S LL SGS D T+++W K H V +V + DG+ + DK
Sbjct: 97 CVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK 156
Query: 567 VLRLW 571
+++W
Sbjct: 157 TIKVW 161
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 230 (86.0 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 74/282 (26%), Positives = 121/282 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S+ GH ++V V F G+ LAS S D +++ WD ++C T + N + +
Sbjct: 145 SLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS---YECIKTMHGHDHNVSSVAF 201
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
A L + +++V C + GH E V V+ G A+
Sbjct: 202 VPAGDYVLSASRDRTI--------KMWEVA-TGYCVKTYTGHREWVRMVRVHIEGSIFAT 252
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP-------------DSKQ-------L 264
S D T+R W ++ + H+H V CIAW+P D+K+ L
Sbjct: 253 CSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFL 312
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
SG ++ I WD S G + + GH W+ L++ P + S+ D IR+W
Sbjct: 313 ASGSRDKTIRIWDVSVGLCL-LTLSGHDNWVRGLAFHPGG-----KYLVSASDDKTIRVW 366
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
D+ +C++ L +H T I + + + S S D+T+KVW
Sbjct: 367 DLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
Score = 210 (79.0 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 56/200 (28%), Positives = 101/200 (50%)
Query: 378 GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK-LVSGS 436
G+A + T D VE G + + K + + +A+ E EK ++ G+
Sbjct: 25 GYADSLETFRKEADLSTEVEKKFGGLLEKKWTSVIRLQKKVM-ELEAKLTEAEKEVIEGA 83
Query: 437 ---DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK 493
+ T W P +K +TGH+ I V F P ++ SAS D +I++WD G+
Sbjct: 84 PTKNKRTPGEWIPRPPEKF--SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGE 141
Query: 494 FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK-KIEQDLPGHGDEVYAVDW 552
+ +L+GH +V VA+ + +LL S SAD ++K+W+ + + + + GH V +V +
Sbjct: 142 YERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAF 201
Query: 553 APDGEKVASGGKDKVLRLWQ 572
P G+ V S +D+ +++W+
Sbjct: 202 VPAGDYVLSASRDRTIKMWE 221
Score = 201 (75.8 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 64/232 (27%), Positives = 103/232 (44%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVN-- 158
C +M GH V SV F P G + S S D T++ W+V T + G ++ V
Sbjct: 185 CIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVH 244
Query: 159 -ETEITKTLAD--VLPLDTLNTEEV-VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVK 214
E I T ++ + + N+++ V++ + V + +S A + K
Sbjct: 245 IEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKK 304
Query: 215 FSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH 274
G LASGS D T+R WDV+ L GH +WV +A+ P K LVS + I
Sbjct: 305 GHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIR 364
Query: 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWD 325
WD K+ + + H+ + T++ FH H + SG D +++W+
Sbjct: 365 VWDLRN-KRCMKTLYAHQHFCTSID---FHKAHP---YVISGSVDQTVKVWE 409
Score = 195 (73.7 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 53/188 (28%), Positives = 87/188 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
S+ GH ++ V F P + S S D T+R WD T +GH V +A+
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L S + I WD + + M GH ++++++ P ++ S+ +D I
Sbjct: 163 KLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAG-DY----VLSASRDRTI 217
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSA-SQDRTIKVWRASDGVMCRT-LEGH 379
++W+V CV+ T H V +R G I++ S D+TI+VW ++ C+ L H
Sbjct: 218 KMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW-LTNSKDCKVELRDH 276
Query: 380 AHWVNTLA 387
H V +A
Sbjct: 277 EHTVECIA 284
Score = 194 (73.4 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 49/177 (27%), Positives = 86/177 (48%)
Query: 379 HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD 438
H + ++ S D +R+ TG ++ +S + + AQ G+ L S S D
Sbjct: 117 HPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVA--FDAQ---GKLLASCSAD 171
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL 498
++ LW+ ++ + + M GH ++ V F P G + SAS D++IK+W+ G + T
Sbjct: 172 LSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTY 231
Query: 499 RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPD 555
GH + V MV + + + S D T++VW +K + +L H V + WAP+
Sbjct: 232 TGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPE 288
Score = 189 (71.6 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 69/267 (25%), Positives = 115/267 (43%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-EGHKHWVLCIAWSPD 260
S+ GH ++V V F G+ LAS S D +++ WD K GH H V +A+ P
Sbjct: 145 SLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPA 204
Query: 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITA----LSWEPFHL--NHQCRR-FA 313
++S ++ I W+ +TG + + GH++W+ + F N Q R +
Sbjct: 205 GDYVLSASRDRTIKMWEVATGYCV-KTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWL 263
Query: 314 SSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCIRWGGSG--------LIYSASQDRTIKV 364
++ KD + + D + +C+ S G + S S+D+TI++
Sbjct: 264 TNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRI 323
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQ 423
W S G+ TL GH +WV LA V A+ + +D N + L +Q
Sbjct: 324 WDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRN--KRCMKTLYAHQ 381
Query: 424 AQCP--EGEK----LVSGSDDFTLFLW 444
C + K ++SGS D T+ +W
Sbjct: 382 HFCTSIDFHKAHPYVISGSVDQTVKVW 408
Score = 183 (69.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 45/141 (31%), Positives = 73/141 (51%)
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491
+VS S+D T+ +W+ E + + + GH + V F G+++AS S D SIKLWD +
Sbjct: 123 MVSASEDATIRIWDFETGEYERS-LKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQ 181
Query: 492 G-KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
+ I T+ GH V VA+ ++S S D T+K+W + T + GH + V V
Sbjct: 182 SYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMV 241
Query: 551 DWAPDGEKVASGGKDKVLRLW 571
+G A+ D+ +R+W
Sbjct: 242 RVHIEGSIFATCSNDQTIRVW 262
Score = 182 (69.1 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 40/143 (27%), Positives = 74/143 (51%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
F GH+ + + + P +VS ++ I WD TG + + ++GH + ++++
Sbjct: 102 FSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETG-EYERSLKGHTDSVQDVAFDA 160
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDR 360
Q + AS D +I++WD S +C++ + H +V+ + + +G + SAS+DR
Sbjct: 161 -----QGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDR 215
Query: 361 TIKVWRASDGVMCRTLEGHAHWV 383
TIK+W + G +T GH WV
Sbjct: 216 TIKMWEVATGYCVKTYTGHREWV 238
Score = 162 (62.1 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 33/101 (32%), Positives = 57/101 (56%)
Query: 472 GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
G +AS S DK+I++WD +G + TL GH V +A+ + LVS S D T++VW++
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Query: 532 KTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
+ K+ + L H ++D+ V SG D+ +++W+
Sbjct: 369 RNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 158 (60.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 50/188 (26%), Positives = 85/188 (45%)
Query: 335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYL 393
LT H S+T + + L+ SAS+D TI++W G R+L+GH V +A
Sbjct: 104 LTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGK 163
Query: 394 MRVEATSTGGFK-YDPANPEESSK------HALAKYQAQCPEGEKLVSGSDDFTLFLWNP 446
+ ++ K +D E K H ++ A P G+ ++S S D T+ +W
Sbjct: 164 LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSV-AFVPAGDYVLSASRDRTIKMWEV 222
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
+ TGH++ + V +G I A+ S D++I++W LR H V
Sbjct: 223 ATGY-CVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVE 281
Query: 507 MVAWSSDS 514
+AW+ ++
Sbjct: 282 CIAWAPEA 289
Score = 154 (59.3 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 34/105 (32%), Positives = 55/105 (52%)
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
+G L SGS D T+ +W+ L ++GH + + F P G+ + SAS DK+I++W
Sbjct: 308 QGPFLASGSRDKTIRIWDVSVGL-CLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
Query: 488 DGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
D R + + TL H + + ++SGS D T+KVW +
Sbjct: 367 DLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 128 (50.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 49/180 (27%), Positives = 77/180 (42%)
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGV 371
FA+ D IR+W C L H +V CI W +AS I +D
Sbjct: 250 FATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEA---AAS---AINEAAGADNK 303
Query: 372 MCRTLEGHAHWVNTLAL-STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE 430
+GH H LA S D +R+ S G + ++ LA + P G+
Sbjct: 304 -----KGH-HQGPFLASGSRDKTIRIWDVSVG-LCLLTLSGHDNWVRGLAFH----PGGK 352
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
LVS SDD T+ +W+ + K+ + + HQ ++F + S S D+++K+W+ R
Sbjct: 353 YLVSASDDKTIRVWDL-RNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 70 (29.7 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
S+ GH ++ V F P + S S D T+R WD T
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFET 139
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 236 (88.1 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 61/203 (30%), Positives = 91/203 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH ++V + F G+ LAS S D T++ WD + GH H V +A P+
Sbjct: 145 TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+VS ++ I W+ TG + + GH++W+ + P N AS D +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCV-KTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWG------------GS-----G----LIYSASQDR 360
R+W V +C L H V CI W GS G + S S+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 361 TIKVWRASDGVMCRTLEGHAHWV 383
TIK+W S G+ TL GH +WV
Sbjct: 319 TIKMWDISTGMCLMTLVGHDNWV 341
Score = 226 (84.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 57/205 (27%), Positives = 93/205 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C +M GH V SV PNG + S S D T++ W+V T + GH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 259 PDSKQLVSGCKNG-VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH--------LNHQC 309
D L++ C N + W +T K+ +R H+ + +SW P +
Sbjct: 244 QDGT-LIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSTISEATGSET 301
Query: 310 RR------FASSG-KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
++ F SG +D I++WD+ C+ L H V + + G I S + D+T
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTL 386
++VW + +TL H H+V +L
Sbjct: 362 LRVWDFKNKRCMKTLNAHEHFVTSL 386
Score = 221 (82.9 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 73/277 (26%), Positives = 123/277 (44%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH ++V + F G+ LAS S D T++ WD F+C T + N + +
Sbjct: 145 TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQG----FECIRTMHGHDHNVSSVA- 199
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
++P N + +V K +++V+ C + GH E V V+ + +G +A
Sbjct: 200 ----IMP----NGDHIVSASRDKTIKMWEVQ-TGYCVKTFTGHREWVRMVRPNQDGTLIA 250
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S S D TVR W V T+ + H+H V CI+W+P+S G G
Sbjct: 251 SCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPF 310
Query: 284 I--GQPMRGHKQW--------ITAL---SWEPFHLNHQCRRFA-SSGKDGAIRIWDVILS 329
+ G + K W +T + +W L H +F S D +R+WD
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNK 370
Query: 330 QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
+C++ L +H VT + + + + + S D+T+KVW
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 42/129 (32%), Positives = 73/129 (56%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W P +K ++GH+ + V F P ++ SAS D +IK+WD G F TL+GH
Sbjct: 94 WIPRPPEKYA--LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 151
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+V +++ +LL S SAD T+K+W+ + + + + GH V +V P+G+ + S
Sbjct: 152 SVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 564 KDKVLRLWQ 572
+DK +++W+
Sbjct: 212 RDKTIKMWE 220
Score = 212 (79.7 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 397 EATSTG--GFKYDPAN--PEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNP 446
E TS G G K DP P K+AL+ +++ P +VS S+D T+ +W
Sbjct: 78 EFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW-- 135
Query: 447 EKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ E R + GH + + F G+++AS S D +IKLWD + + I T+ GH V
Sbjct: 136 DYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 195
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
VA + +VS S D T+K+W ++T + GH + V V DG +AS D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 566 KVLRLW 571
+ +R+W
Sbjct: 256 QTVRVW 261
Score = 208 (78.3 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 57/185 (30%), Positives = 90/185 (48%)
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFK---YDPANPEESSK-HALAKYQAQCPE-GE 430
L GH V + + + V A+ K Y+ + E + K H + G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
L S S D T+ LW+ + + + M GH ++ V P+G I SAS DK+IK+W+ +
Sbjct: 164 LLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
G + T GH + V MV + D L+ S S D T++VW + TK+ + +L H V +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 551 DWAPD 555
WAP+
Sbjct: 283 SWAPE 287
Score = 189 (71.6 bits), Expect = 8.4e-25, Sum P(2) = 8.4e-25
Identities = 58/203 (28%), Positives = 90/203 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH V V F P + S S D T++ WD T +GH V I++
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTG 162
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L S + I WD G + + M GH +++++ P + +H S+ +D I
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP-NGDH----IVSASRDKTI 216
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++W+V CV+ T H V +R G LI S S D+T++VW + L H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
Query: 381 HWVNTL--ALSTDYLMRVEATST 401
H V + A + Y EAT +
Sbjct: 277 HVVECISWAPESSYSTISEATGS 299
Score = 187 (70.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 58/237 (24%), Positives = 104/237 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C +M GH V SV PNG + S S D T++ W+V T C T + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----CVKT-FTGHREWVR 238
Query: 162 ITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRP---VTRCTSSMPGHAEAVISV--- 213
+ + D + + + ++ V + V K+ ++R V C S P + + IS
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATG 298
Query: 214 ----KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
K G L SGS D T++ WD++T L GH +WV + + K ++S
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWD 325
+ + WD K+ + + H+ ++T+L + H+ + +G D +++W+
Sbjct: 359 DKTLRVWDFKN-KRCMKTLNAHEHFVTSLDF------HKTAPYVVTGSVDQTVKVWE 408
Score = 185 (70.2 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
+ GH+ V + + P +VS ++ I WD TG + ++GH + +S++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
H + AS D I++WD +C+R + H +V+ + +G I SAS+D+T
Sbjct: 160 ----HTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
IK+W G +T GH WV + + D
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 53/187 (28%), Positives = 89/187 (47%)
Query: 335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS-TDY 392
L+ H VT + + ++ SAS+D TIKVW G RTL+GH V ++ T
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 393 LMR-VEATST---GGFK-YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L+ A T F+ ++ H ++ A P G+ +VS S D T+ +W +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV-AIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ TGH++ + V + DG +IAS S D+++++W + LR H V
Sbjct: 223 TGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 508 VAWSSDS 514
++W+ +S
Sbjct: 282 ISWAPES 288
Score = 168 (64.2 bits), Expect = 8.4e-25, Sum P(2) = 8.4e-25
Identities = 38/129 (29%), Positives = 65/129 (50%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W PE +++ TG + + G + S S DK+IK+WD G + TL GH
Sbjct: 284 WAPESSYSTISEATGSETK----KSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDN 339
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V V + S + ++S + D TL+VW+ K K+ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 564 KDKVLRLWQ 572
D+ +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 55/218 (25%), Positives = 104/218 (47%)
Query: 288 MRGHKQWITALSWEP-FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GH+ +T + + P F + S+ +D I++WD R L HT SV I
Sbjct: 104 LSGHRSPVTRVIFHPVFSV------MVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS 157
Query: 347 WGGSG-LIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLAL--STDYLMRVEATST- 401
+ +G L+ S S D TIK+W G C RT+ GH H V+++A+ + D+++ T
Sbjct: 158 FDHTGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI 216
Query: 402 GGFKYDPANPEES-SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
++ ++ + H + +G + S S+D T+ +W K+ A + H
Sbjct: 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-VVATKECKAELREH 275
Query: 460 QQLINCVEFSPDGRI--IASASFDKSIKLWDGRIGKFI 495
+ ++ C+ ++P+ I+ A+ ++ K G+ G F+
Sbjct: 276 EHVVECISWAPESSYSTISEATGSETKK--SGKPGPFL 311
Score = 143 (55.4 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L+SGS D T+ +W+ L + GH + V F G+ I S + DK++++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
+ + + TL H V + + + +V+GS D T+KVW +
Sbjct: 367 FKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 63 (27.2 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
++ GH V V F P + S S D T++ WD T
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET 139
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 294 (108.6 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 77/291 (26%), Positives = 140/291 (48%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
+GH+ IT++ F LN ++ AS D + +W + H +VTC+ +
Sbjct: 16 KGHRDAITSVD---FSLN--TKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFS 70
Query: 349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
SG L+ S S+D+T+++W + H V ++ +D V A+ K
Sbjct: 71 PSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 408 PANPEES----SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL 462
+ ++ S+H + P+G +VS SDD T+ LW+ + ++ + H
Sbjct: 131 STHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGF 189
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
+ V+F P G IA+AS D ++K+WD R + + + H AV +++ L++ S+
Sbjct: 190 VTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASS 249
Query: 523 DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
DSTLK+ ++ ++ L GH V ++ GE ASGG D+ + +W++
Sbjct: 250 DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 272 (100.8 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 77/291 (26%), Positives = 129/291 (44%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF-H 304
+GH+ + + +S ++KQL SG + + W + + GHK +T +++ P H
Sbjct: 16 KGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYR-FAGHKDAVTCVNFSPSGH 74
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIK 363
L AS +D +RIW + V +HT +V + + G + +AS D+T+K
Sbjct: 75 L------LASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK 128
Query: 364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE---ESSKHA- 418
VW +L H +WV S D + V A+ K +D + E +H
Sbjct: 129 VWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
Y P G + + S D T+ +W+ + + L H +N + F P G + +A
Sbjct: 189 FVTYVDFHPSGTCIAAASMDNTVKVWDV-RTHRLLQHYQLHSAAVNALSFHPSGNYLLTA 247
Query: 479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
S D ++K+ D G+ + TL GH VA+S SG +D + VW
Sbjct: 248 SSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 252 (93.8 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 74/289 (25%), Positives = 121/289 (41%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH +A+ SV FS N + LASGS D+ + W + Q+ ++ GHK V C+ +SP L
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
SG ++ + W + K R H + ++ H + ++ D +++W
Sbjct: 77 ASGSRDKTVRIWIPNV-KGESTVFRAHTATVRSV-----HFCSDGQSLVTASDDKTVKVW 130
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
+ + L+ H V C R+ G LI SAS D+T+K+W + + H +V
Sbjct: 131 STHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 384 NTLALSTDYLMRVEATSTGGFKYDPANPEESSKH-----ALAKYQAQCPEGEKLVSGSDD 438
+ A+ K +H A + P G L++ S D
Sbjct: 191 TYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSD 250
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
TL + + E + L + GHQ V FS G AS D+ + +W
Sbjct: 251 STLKILDL-MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 240 (89.5 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 80/301 (26%), Positives = 137/301 (45%)
Query: 77 TLNTEEVVDIVYQK-QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVR 135
+LNT+++ V+ ++P +R GH +AV V FSP+G LASGS D TVR
Sbjct: 28 SLNTKQLASGSMDSCLMVWHMKPQSRAYR-FAGHKDAVTCVNFSPSGHLLASGSRDKTVR 86
Query: 136 FWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQV 193
W P K E T + + +D L T + ++ V + ++++ +F
Sbjct: 87 IW-----IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLF-- 139
Query: 194 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-CEGHKHWV 252
S+ H V +FSP+GR + S S D TV+ WD T++ + CE H +V
Sbjct: 140 --------SLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-HGGFV 190
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
+ + P + + + + WD T + + Q + H + ALS FH +
Sbjct: 191 TYVDFHPSGTCIAAASMDNTVKVWDVRTHRLL-QHYQLHSAAVNALS---FHPSGNYLLT 246
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGV 371
ASS D ++I D++ + + L H T + + +G + S D + VW+++ V
Sbjct: 247 ASS--DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDV 304
Query: 372 M 372
+
Sbjct: 305 V 305
Score = 239 (89.2 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 65/244 (26%), Positives = 113/244 (46%)
Query: 333 RVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS-T 390
R H ++T + + + + S S D + VW GH V + S +
Sbjct: 13 RHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPS 72
Query: 391 DYLMRVEATSTGGFKYDPANPEESS---KH-ALAKYQAQCPEGEKLVSGSDDFTLFLWNP 446
+L+ + + P ES+ H A + C +G+ LV+ SDD T+ +W+
Sbjct: 73 GHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
++K L ++ H + C FSPDGR+I SAS DK++KLWD + + + H V
Sbjct: 133 HRQK-FLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 191
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
V + + + S D+T+KVW+++T ++ Q H V A+ + P G + + D
Sbjct: 192 YVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDS 251
Query: 567 VLRL 570
L++
Sbjct: 252 TLKI 255
Score = 185 (70.2 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 54/195 (27%), Positives = 86/195 (44%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH +A+ SV FS N + LASGS D+ + W + Q+ ++ G ++ +T
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAG-------HKDAVT--CV 67
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
+ P L D K + V ++ H V SV F +G+SL + S
Sbjct: 68 NFSPSGHLLASGSRD----KTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASD 123
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
D TV+ W Q LF H +WV C +SPD + +VS + + WD T ++
Sbjct: 124 DKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDK-TSRECVHS 182
Query: 288 MRGHKQWITALSWEP 302
H ++T + + P
Sbjct: 183 YCEHGGFVTYVDFHP 197
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 293 (108.2 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 76/292 (26%), Positives = 141/292 (48%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
+GH+ +T + F +N ++ AS D + +W + T H +VTC+ +
Sbjct: 16 KGHRDAVTCVD---FSIN--TKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
SG L+ S S+D+T+++W + H V ++ +D V A+ K
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 408 PANPEESSKHALAKY--QAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
A + +L+++ +C P+G +VS SDD T+ LW+ + ++ + H
Sbjct: 131 -ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KSSRECVHSYCEHGG 188
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
+ V+F P G IA+A D ++K+WD R + + + H AV +++ L++ S
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITAS 248
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
+DSTLK+ ++ ++ L GH V ++ GE ASGG D+ + +W++
Sbjct: 249 SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 282 (104.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 86/316 (27%), Positives = 139/316 (43%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF-H 304
+GH+ V C+ +S ++KQL SG + + W + + GHK +T +++ P H
Sbjct: 16 KGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYR-FTGHKDAVTCVNFSPSGH 74
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIK 363
L AS +D +RIW + V +HT +V + + G + +AS D+T+K
Sbjct: 75 L------LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVK 128
Query: 364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE---ESSKHA- 418
VW +L H +WV S D + V A+ K +D ++ E +H
Sbjct: 129 VWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGG 188
Query: 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
Y P G + + D T+ +W+ + + L H +N + F P G + +A
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDV-RTHRLLQHYQLHSAAVNGLSFHPSGNYLITA 247
Query: 479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ 538
S D ++K+ D G+ + TL GH VA+S SG +D + VW K
Sbjct: 248 SSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW-----KSNF 302
Query: 539 DLPGHGDEVYAVDWAP 554
D+ HG EV V P
Sbjct: 303 DIVDHG-EVTKVPRPP 317
Score = 250 (93.1 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 75/289 (25%), Positives = 120/289 (41%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH +AV V FS N + LASGS D+ + W + Q+ ++ GHK V C+ +SP L
Sbjct: 17 GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
SG ++ + W + K R H + ++ H + F ++ D +++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRSV-----HFCSDGQSFVTASDDKTVKVW 130
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
+ + L+ H V C ++ G LI SAS D+T+K+W S + H +V
Sbjct: 131 ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFV 190
Query: 384 NTLALSTDYLMRVEATSTGGFKYDPANPEESSKH-----ALAKYQAQCPEGEKLVSGSDD 438
+ A K +H A + P G L++ S D
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSD 250
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
TL + + E + L + GHQ V FS G AS D+ + +W
Sbjct: 251 STLKILDL-MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 236 (88.1 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 64/244 (26%), Positives = 111/244 (45%)
Query: 333 RVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS-T 390
R H +VTC+ + + + S S D + VW GH V + S +
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 391 DYLMRVEATSTGGFKYDPANPEESS---KH-ALAKYQAQCPEGEKLVSGSDDFTLFLWNP 446
+L+ + + P ES+ H A + C +G+ V+ SDD T+ +W
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWAT 132
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
++K L ++ H + C +FSPDGR+I SAS DK++KLWD + + + H V
Sbjct: 133 HRQK-FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVT 191
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
V + + + D+T+KVW+++T ++ Q H V + + P G + + D
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDS 251
Query: 567 VLRL 570
L++
Sbjct: 252 TLKI 255
Score = 227 (85.0 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 74/280 (26%), Positives = 127/280 (45%)
Query: 93 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTP 152
V+ ++P +R GH +AV V FSP+G LASGS D TVR W P K E T
Sbjct: 45 VWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-----VPNVKGESTV 98
Query: 153 YLFYVNETEITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRPVTRCTSSMPGHAEAV 210
+ + +D T + ++ V + ++++ +F S+ H V
Sbjct: 99 FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLF----------SLSQHINWV 148
Query: 211 ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-CEGHKHWVLCIAWSPDSKQLVSGCK 269
KFSP+GR + S S D TV+ WD +++ + CE H +V + + P + +
Sbjct: 149 RCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCE-HGGFVTYVDFHPSGTCIAAAGM 207
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS 329
+ + WD T + + Q + H + LS+ P N+ ASS D ++I D++
Sbjct: 208 DNTVKVWDVRTHRLL-QHYQLHSAAVNGLSFHPSG-NYLIT--ASS--DSTLKILDLMEG 261
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRAS 368
+ + L H T + + +G + S D + VW+++
Sbjct: 262 RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 176 (67.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 54/195 (27%), Positives = 85/195 (43%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH +AV V FS N + LASGS D+ + W + Q+ ++ G ++ +T
Sbjct: 17 GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTG-------HKDAVT--CV 67
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
+ P L D K V V ++ H V SV F +G+S + S
Sbjct: 68 NFSPSGHLLASGSRD----KTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASD 123
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
D TV+ W Q LF H +WV C +SPD + +VS + + WD S+ + +
Sbjct: 124 DKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSY 183
Query: 288 MRGHKQWITALSWEP 302
H ++T + + P
Sbjct: 184 CE-HGGFVTYVDFHP 197
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 319 (117.4 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 123/485 (25%), Positives = 214/485 (44%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H + V+ FS + R +A+ S D V+ W+ T + + + VN T
Sbjct: 656 HEDEVLCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYD--EHSEQVNCCHFTNNSNH 713
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
+L L T +++ + + Q C ++M GH +V +FSP+ + LAS S D
Sbjct: 714 LL-LATGSSDYFLKLWDLNQK--------ECRNTMFGHTNSVSHCRFSPDDKLLASCSAD 764
Query: 229 TTVRFWDVTTQTP--------LF-----KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA 275
T++ WDV + F E + V C +WS D LV KN V+
Sbjct: 765 GTLKLWDVKSANERKSINVKQFFLNSEESQEDMEVMVKCCSWSADGASLVVAAKNKVL-L 823
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
++ TG + + GH I + P NH S + +W+ + C++V
Sbjct: 824 FNIHTGGLLAEIHTGHHSTIQYCDFSPS--NHLAVVALSQY---CVELWN--MDSCLKVA 876
Query: 336 T--SHTRSVTCIRWGGSGLIY-SASQDRTIKVWRA------SDGVMCRTLEGHAHWVNTL 386
H V C + G + ++S D TI++W S V+ + ++ +
Sbjct: 877 DCRGHLSWVHCAMFSPDGSSFLTSSDDETIRLWETKKVCKNSAIVLNKKIDVVFQENEVM 936
Query: 387 ALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNP 446
L+ D + R++ + + D + S L+ P + L GSDD + +
Sbjct: 937 VLAVDNIRRLQVINGKTGQIDYLTEAQVSCCCLS------PHLQYLAFGSDDGAIQVLEL 990
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
+ +R T H+ + ++F+ DG+ + S+S D +I++W+ + + ++ L+ H + V
Sbjct: 991 LNNRLFQSR-TRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETVS-LQAHQETVK 1048
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
+SRLL S S D T+KVWN+ T +IE+D H D V + D +PD K +S DK
Sbjct: 1049 DFRLLKNSRLL-SWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADK 1107
Query: 567 VLRLW 571
++W
Sbjct: 1108 TAKIW 1112
Score = 278 (102.9 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 111/487 (22%), Positives = 196/487 (40%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C ++M GH +V +FSP+ + LAS S D T++ WDV + K F++N E
Sbjct: 735 CRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANER-KSINVKQ-FFLNSEE 792
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAV--FQVRPVTRCTSSMPGHAEAVISVKFSPNG 219
+ + ++ + + + +V K V F + GH + FSP+
Sbjct: 793 SQEDMEVMVKCCSWSADGASLVVAAKNKVLLFNIHTGGLLAEIHTGHHSTIQYCDFSPSN 852
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
V W++ + + C GH WV C +SPD ++ + I W++
Sbjct: 853 HLAVVALSQYCVELWNMDSCLKVADCRGHLSWVHCAMFSPDGSSFLTSSDDETIRLWETK 912
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLN-HQCRRF-ASSGKDGAIR-IWDVILSQCVRVLT 336
+ + K + E L RR +GK G I + + +S C L+
Sbjct: 913 KVCKNSAIVLNKKIDVVFQENEVMVLAVDNIRRLQVINGKTGQIDYLTEAQVSCCC--LS 970
Query: 337 SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
H + + +G S D I+V + + ++ H + V + +TD +
Sbjct: 971 PHLQYLA---FG--------SDDGAIQVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVI 1019
Query: 397 EATSTGGFKYDPANPEES---SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSL 453
++ + EE+ H + + +L+S S D T+ +WN +
Sbjct: 1020 SSSDDSAIQVWNWQSEETVSLQAHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITGRIE- 1078
Query: 454 ARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD 513
HQ + + SPD +S S DK+ K+W + + LRGH V A+S D
Sbjct: 1079 KDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSVD 1138
Query: 514 SRLLVSGSADSTLKVWNMKTKK---------IEQDLPGHGDEVYAVDWAPDGEKVASGGK 564
S LL +G + +++WN+ + +E HG V + ++PDG+ + S G
Sbjct: 1139 STLLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLRFSPDGKMLVSAGG 1198
Query: 565 DKVLRLW 571
L+ W
Sbjct: 1199 --YLKWW 1203
Score = 231 (86.4 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 72/302 (23%), Positives = 131/302 (43%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H +AV FS +G+ +AS D T++ + T L + + H+ VLC A+S D + +
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRFIA 673
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ + + W+S TG+ + Q H + + + + NH A+ D +++WD
Sbjct: 674 TCSVDKKVKIWNSVTGELV-QSYDEHSEQVNCCHFTN-NSNHLL--LATGSSDYFLKLWD 729
Query: 326 VILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
+ +C + HT SV+ R+ L+ S S D T+K+W +++ ++N
Sbjct: 730 LNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLN 789
Query: 385 TLALSTDYLMRVEATS--TGGFKYDPANPEE----------------SSKHALAKYQAQC 426
+ D + V+ S G A + + H+ +Y
Sbjct: 790 SEESQEDMEVMVKCCSWSADGASLVVAAKNKVLLFNIHTGGLLAEIHTGHHSTIQYCDFS 849
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P V + + LWN + K +A GH ++C FSPDG ++S D++I+L
Sbjct: 850 PSNHLAVVALSQYCVELWNMDSCLK-VADCRGHLSWVHCAMFSPDGSSFLTSSDDETIRL 908
Query: 487 WD 488
W+
Sbjct: 909 WE 910
Score = 211 (79.3 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 50/158 (31%), Positives = 84/158 (53%)
Query: 417 HALAKYQAQCPE-GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII 475
H A Y A E G+++ S D TL ++ E +K L + H+ + C FS D R I
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEK-LLEIKAHEDEVLCCAFSADDRFI 672
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKT 533
A+ S DK +K+W+ G+ + + H + V ++++S LL +GS+D LK+W++
Sbjct: 673 ATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQ 732
Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
K+ + GH + V ++PD + +AS D L+LW
Sbjct: 733 KECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLW 770
Score = 173 (66.0 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 88/371 (23%), Positives = 159/371 (42%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH V FSP+G S + S D T+R W+ T + C K+ + + D +
Sbjct: 880 GHLSWVHCAMFSPDGSSFLTSSDDETIRLWE-TKKV----C---KNSAIVLNKKID---V 928
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
V ++ A D+ Q+ G ++T L+ + A DGAI++
Sbjct: 929 VFQENEVMVLAVDNIRRLQVINGKTGQIDYLTEAQVSCCCLSPHLQYLAFGSDDGAIQVL 988
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWR-ASDGVMCRTLEGHAHW 382
+++ ++ + T H +V I++ G + S+S D I+VW S+ + +L+ H
Sbjct: 989 ELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETV--SLQAHQET 1046
Query: 383 V-------NT--LALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV 433
V N+ L+ S D ++V TG + D +++ P+ K
Sbjct: 1047 VKDFRLLKNSRLLSWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDIS-----PDATKFS 1101
Query: 434 SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK 493
S S D T +W+ + L + GH+ + C FS D ++A+ + I++W+ G+
Sbjct: 1102 STSADKTAKIWSFDL-LSPLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGE 1160
Query: 494 FITT-----LRG----HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG 544
+ + + G H V + +S D ++LVS A LK WN+ + K Q +G
Sbjct: 1161 LLHSCAPVLVEGGAATHGGWVTDLRFSPDGKMLVS--AGGYLKWWNVDSGKSIQTFYTNG 1218
Query: 545 DEVYAVDWAPD 555
+ + +PD
Sbjct: 1219 TNLKKIHVSPD 1229
Score = 171 (65.3 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 40/140 (28%), Positives = 72/140 (51%)
Query: 437 DDFTLFL-WNPEKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK 493
D+ L+L W +K K+L+R+ H + FS DG+ IAS DK+++++ G+
Sbjct: 589 DNGMLYLEWINKKNIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGE 648
Query: 494 FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA 553
+ ++ H V A+S+D R + + S D +K+WN T ++ Q H ++V +
Sbjct: 649 KLLEIKAHEDEVLCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFT 708
Query: 554 PDGEKV--ASGGKDKVLRLW 571
+ + A+G D L+LW
Sbjct: 709 NNSNHLLLATGSSDYFLKLW 728
Score = 161 (61.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 61/236 (25%), Positives = 100/236 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R S H V ++F+ +G+++ S S D+ ++ W+ ++ E T L ET
Sbjct: 994 RLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWN-------WQSEETVSLQAHQET 1046
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQA-VFQVRPVT-RCTSSMPGHAEAVISVKFSPN 218
V L ++ + V+ + +T R H + V+S SP+
Sbjct: 1047 --------VKDFRLLKNSRLLSWSFDGTVKVWNI--ITGRIEKDFVCHQDTVLSCDISPD 1096
Query: 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS 278
+S S D T + W +PL + GHK V C A+S DS L +G NG I W+
Sbjct: 1097 ATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNV 1156
Query: 279 STGKQIGQ--PM--RG----HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
S G+ + P+ G H W+T L + P + S+G G ++ W+V
Sbjct: 1157 SNGELLHSCAPVLVEGGAATHGGWVTDLRFSP-----DGKMLVSAG--GYLKWWNV 1205
Score = 38 (18.4 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 11/51 (21%), Positives = 27/51 (52%)
Query: 6 DKITTKRILTRFKSDDGEVAG-DLLDLPLNVNTEHLSLIVNSLLQQDEGTP 55
D + + + +S G+ G ++L L +N+ L +S++++ +G+P
Sbjct: 271 DSVMGPKYVIPVESGLGKEKGLEILSLFVNMKKADLPEQAHSIIKECKGSP 321
Score = 37 (18.1 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 323 IWDV-IL----SQCVRVLTSHTRSVT 343
IWD +L +QC +LT+ +SVT
Sbjct: 245 IWDPWVLKAFDNQCQILLTTRDKSVT 270
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 299 (110.3 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 113/409 (27%), Positives = 171/409 (41%)
Query: 190 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG-SGDTTVRFWDVTTQTPLFKCEGH 248
V V P T + P + EA+++ + N S GD + T L GH
Sbjct: 121 VATVTPATVSQQNPPKNQEAIVNGAHAINNHSKPMEIDGDVEI---PPNKATVL---RGH 174
Query: 249 KHWVLCIAWSPDSKQLVSGCKNGVIHAWD-------SSTGKQIGQPMR--GH----KQWI 295
+ V AW+P S L SG + W+ +ST + +R GH + +
Sbjct: 175 ESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVPSNKDV 234
Query: 296 TALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIY 354
T+L W N A+ DG RIW L H + ++W G I
Sbjct: 235 TSLDW-----NSDGTLLATGSYDGFARIWTEN-GNLASTLGQHKGPIFALKWNKKGNYIL 288
Query: 355 SASQDRTIKVWRASDGVMCRTLEGHA------HWVN--TLA-LSTDYLMRVEATSTGGFK 405
SA D+T +W A G + H+ W N T A STD M + G +
Sbjct: 289 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTD--MCIHVCRLGCDR 346
Query: 406 YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINC 465
P + + + + P G L S SDD TL +W+ K+ + + H++ I
Sbjct: 347 --PVKTFQGHTNEVNAIKWD-PSGMLLASCSDDMTLKIWSM-KQDACVHNLQAHRKEIYT 402
Query: 466 VEFSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRL 516
+++SP G ++ASASFD +++LWD G TLR H + VY VA+S D +
Sbjct: 403 IKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKY 462
Query: 517 LVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
L SGS D + +WN ++ + G G ++ V W G+KV + D
Sbjct: 463 LASGSFDKCVHIWNTQSGSLVHSYQGTGG-IFEVCWNAQGDKVGASASD 510
Score = 227 (85.0 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 66/280 (23%), Positives = 124/280 (44%)
Query: 311 RFASSGKDGAIRIWDVILSQCVRVLTSH----TRSVTCIRWGGSG-LIYSASQDRTIKVW 365
R + ++G+ ++L C+R H + VT + W G L+ + S D ++W
Sbjct: 200 RIWNLNENGSRASTQLVLRHCIRE-GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIW 258
Query: 366 RASDGVMCRTLEGHAHWVNTLALST--DYLMRVEATSTGGFKYDPANPEESSK---HALA 420
+G + TL H + L + +Y++ T +D E + H+
Sbjct: 259 -TENGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTT-IIWDAHTGEAKQQFPFHSAP 316
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
S S D + + ++ + GH +N +++ P G ++AS S
Sbjct: 317 ALDVDWQNNTTFASCSTDMCIHVCRLGCDRP-VKTFQGHTNEVNAIKWDPSGMLLASCSD 375
Query: 481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWS---------SDSRLLVSGSADSTLKVWNM 531
D ++K+W + + L+ H + +Y + WS + S +L S S DST+++W+M
Sbjct: 376 DMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDM 435
Query: 532 KTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ L H + VY+V ++PDG+ +ASG DK + +W
Sbjct: 436 EQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 475
Score = 146 (56.5 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 55/229 (24%), Positives = 96/229 (41%)
Query: 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
P H+ + V + N + AS S D + + P+ +G + NE K
Sbjct: 311 PFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQG-----HTNEVNAIKWD 364
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----- 221
+ L + + + + I KQ C ++ H + + ++K+SP G +
Sbjct: 365 PSGMLLASCSDDMTLKIWSMKQDA--------CVHNLQAHRKEIYTIKWSPTGPTTSNPN 416
Query: 222 ----LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
LAS S D+TVR WD+ H+ V +A+SPD K L SG + +H W+
Sbjct: 417 SSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN 476
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ +G + +G I + W N Q + +S DG++ + D+
Sbjct: 477 TQSGSLV-HSYQG-TGGIFEVCW-----NAQGDKVGASASDGSVCVLDL 518
Score = 140 (54.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 44/181 (24%), Positives = 80/181 (44%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R + GH V ++K+ P+G LAS S D T++ W + + + Y +
Sbjct: 346 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKW 405
Query: 161 EIT-KTLADV---LPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFS 216
T T ++ + L + + + V + +Q V CT ++ H E V SV FS
Sbjct: 406 SPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGV--------CTHTLRKHQEPVYSVAFS 457
Query: 217 PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
P+G+ LASGS D V W+ + + + +G + + W+ ++ + +G +
Sbjct: 458 PDGKYLASGSFDKCVHIWNTQSGSLVHSYQG-TGGIFEVCWNAQGDKVGASASDGSVCVL 516
Query: 277 D 277
D
Sbjct: 517 D 517
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 33/91 (36%), Positives = 49/91 (53%)
Query: 496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK-------TKKIEQ--------DL 540
T LRGH V++ AW+ S LL SGS DST ++WN+ T+ + + D+
Sbjct: 169 TVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDV 228
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
P + D V ++DW DG +A+G D R+W
Sbjct: 229 PSNKD-VTSLDWNSDGTLLATGSYDGFARIW 258
Score = 130 (50.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 57/273 (20%), Positives = 106/273 (38%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGTPYLFYVNETE 161
S++ H + ++K++ G + S D T WD T F P L + +
Sbjct: 266 STLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDV--DWQ 323
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
T A + +T+ + + + RPV + GH V ++K+ P+G
Sbjct: 324 NNTTFA------SCSTDMCIHVC----RLGCDRPV----KTFQGHTNEVNAIKWDPSGML 369
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP---------DSKQLVSGCKNGV 272
LAS S D T++ W + + + H+ + I WSP S L S +
Sbjct: 370 LASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDST 429
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
+ WD G +R H++ + ++++ P + AS D + IW+ V
Sbjct: 430 VRLWDMEQGV-CTHTLRKHQEPVYSVAFSP-----DGKYLASGSFDKCVHIWNTQSGSLV 483
Query: 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364
T + + W G + +++ D ++ V
Sbjct: 484 HSYQG-TGGIFEVCWNAQGDKVGASASDGSVCV 515
Score = 121 (47.7 bits), Expect = 0.00048, P = 0.00048
Identities = 35/130 (26%), Positives = 60/130 (46%)
Query: 456 MTGHQQLINCVEFSPDGRIIASASFDKSIKLWD-GRIGKFITT---LR------GH-VQA 504
+ GH+ + ++P ++AS S D + ++W+ G +T LR GH V +
Sbjct: 171 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVPS 230
Query: 505 ---VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS 561
V + W+SD LL +GS D ++W + + L H ++A+ W G + S
Sbjct: 231 NKDVTSLDWNSDGTLLATGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYILS 289
Query: 562 GGKDKVLRLW 571
G DK +W
Sbjct: 290 AGVDKTTIIW 299
Score = 73 (30.8 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 98 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
P + T + GH V ++P LASGSGD+T R W++
Sbjct: 164 PPNKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNL 204
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 290 (107.1 bits), Expect = 9.6e-24, P = 9.6e-24
Identities = 76/291 (26%), Positives = 139/291 (47%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
+GH+ +T++ F LN ++ AS D + +W + H +VTC+ +
Sbjct: 16 KGHRDAVTSVD---FSLN--TKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFS 70
Query: 349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
SG L+ S S+D+T+++W + H V ++ +D V A+ K
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 408 PANPEES----SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL 462
+ ++ S+H + P+G +VS SDD T+ LW+ + ++ + H
Sbjct: 131 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGF 189
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
+ V+F P G IA+A D ++K+WD R + + + H AV +++ LV+ S+
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASS 249
Query: 523 DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
DSTLK+ ++ ++ L GH V ++ GE ASGG D+ + +W++
Sbjct: 250 DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 275 (101.9 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 86/325 (26%), Positives = 141/325 (43%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF-H 304
+GH+ V + +S ++KQL SG + + W + + GHK +T +++ P H
Sbjct: 16 KGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYR-FAGHKDAVTCVNFSPSGH 74
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIK 363
L AS +D +RIW + V +HT +V + + G + +AS D+T+K
Sbjct: 75 L------LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVK 128
Query: 364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE---ESSKHA- 418
VW +L H +WV S D + V A+ K +D + E +H
Sbjct: 129 VWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
Y P G + + D T+ +W+ + + L H +N + F P G + +A
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDV-RTHRLLQHYQLHSAAVNALSFHPSGNYLVTA 247
Query: 479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ 538
S D ++K+ D G+ + TL GH VA+S SG +D + VW K
Sbjct: 248 SSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW-----KSNF 302
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG 563
D+ +G EV V P + +S G
Sbjct: 303 DIVDYG-EVLRVQ-RPPATRASSSG 325
Score = 260 (96.6 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 77/289 (26%), Positives = 121/289 (41%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH +AV SV FS N + LASGS D+ + W + QT ++ GHK V C+ +SP L
Sbjct: 17 GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
SG ++ + W + K R H + ++ H + F ++ D +++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRSV-----HFCSDGQSFVTASDDKTVKVW 130
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
+ + L+ H V C ++ G LI SAS D+T+K+W + + H +V
Sbjct: 131 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 384 NTLALSTDYLMRVEATSTGGFKYDPANPEESSKH-----ALAKYQAQCPEGEKLVSGSDD 438
+ A K +H A + P G LV+ S D
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSD 250
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
TL + + E + L + GHQ V FS G AS D+ + +W
Sbjct: 251 STLKILDL-MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 241 (89.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 77/297 (25%), Positives = 134/297 (45%)
Query: 77 TLNTEEVVDIVYQK-QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVR 135
+LNT+++ V+ ++P TR GH +AV V FSP+G LASGS D TVR
Sbjct: 28 SLNTKQLASGSMDSCLMVWHMKPQTRAYR-FAGHKDAVTCVNFSPSGHLLASGSRDKTVR 86
Query: 136 FWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQV 193
W P K E T + + +D T + ++ V + ++++ +F
Sbjct: 87 IW-----VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLF-- 139
Query: 194 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-CEGHKHWV 252
S+ H V KFSP+GR + S S D TV+ WD T++ + CE H +V
Sbjct: 140 --------SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-HGGFV 190
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
+ + P + + + + WD T + + Q + H + ALS+ P N+
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLL-QHYQLHSAAVNALSFHPSG-NY----L 244
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRAS 368
++ D ++I D++ + + L H T + + +G + S D + VW+++
Sbjct: 245 VTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 236 (88.1 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 64/244 (26%), Positives = 112/244 (45%)
Query: 333 RVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS-T 390
R H +VT + + + + S S D + VW GH V + S +
Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPS 72
Query: 391 DYLMRVEATSTGGFKYDPANPEESS---KH-ALAKYQAQCPEGEKLVSGSDDFTLFLWNP 446
+L+ + + P ES+ H A + C +G+ V+ SDD T+ +W+
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWST 132
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
++K L ++ H + C +FSPDGR+I SAS DK++KLWD + + + H V
Sbjct: 133 HRQK-FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 191
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
V + + + D+T+KVW+++T ++ Q H V A+ + P G + + D
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 251
Query: 567 VLRL 570
L++
Sbjct: 252 TLKI 255
Score = 187 (70.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 56/195 (28%), Positives = 85/195 (43%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH +AV SV FS N + LASGS D+ + W + QT ++ G ++ +T
Sbjct: 17 GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAG-------HKDAVT--CV 67
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
+ P L D K V V ++ H V SV F +G+S + S
Sbjct: 68 NFSPSGHLLASGSRD----KTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASD 123
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
D TV+ W Q LF H +WV C +SPD + +VS + + WD T ++
Sbjct: 124 DKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK-TSRECVHS 182
Query: 288 MRGHKQWITALSWEP 302
H ++T + + P
Sbjct: 183 YCEHGGFVTYVDFHP 197
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 291 (107.5 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 87/295 (29%), Positives = 142/295 (48%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH +A+ S+ FSP+G+ +ASGS D +V W++ Q+ ++ GHK V C+ +SP + L
Sbjct: 16 GHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLL 75
Query: 265 VSGCKNGVIHAWDSST-GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRI 323
S ++ + W S G+ + R H + ++ F + Q AS D +I++
Sbjct: 76 ASSSRDKTVRLWVPSVKGESV--LFRAHTGSVRSVC---FSADGQSLLTASD--DQSIKL 128
Query: 324 WDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL-E--GH 379
W V + + L H V C R+ G L+ S S DRT+K+W AS + T E G+
Sbjct: 129 WSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGY 188
Query: 380 AHWVN-------TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL 432
+ +V+ S+D +RV T ++ +AL+ + P G L
Sbjct: 189 SSYVDFHPSSTCIATASSDNTVRVWDIRTHTL-LQHYQVHSAAVNALSFH----PSGNHL 243
Query: 433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
++ S D TL + + E + L + GHQ +CV FS G ASA D+ + +W
Sbjct: 244 LTASSDSTLKILDL-LEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 264 (98.0 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 73/293 (24%), Positives = 140/293 (47%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
+GH+ IT+L + P ++ AS D ++ +W++ T H +VTC+++
Sbjct: 15 KGHRDAITSLDFSP-----SGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFS 69
Query: 349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
S L+ S+S+D+T+++W S H V ++ S D + A+ K
Sbjct: 70 PSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLW 129
Query: 408 PANPEESSKHALAKYQ--AQC----PEGEKLVSGSDDFTLFLWNPEKEK--KSLARMTGH 459
+ ++ L ++ +C P+G+ +VS SDD T+ LW+ + + G+
Sbjct: 130 SVHRQKIIC-TLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGY 188
Query: 460 QQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVS 519
V+F P IA+AS D ++++WD R + + H AV +++ L++
Sbjct: 189 SSY---VDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLT 245
Query: 520 GSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
S+DSTLK+ ++ ++ L GH V ++ G++ AS G D+ + +W+
Sbjct: 246 ASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWR 298
Score = 254 (94.5 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 76/303 (25%), Positives = 133/303 (43%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF-H 304
+GH+ + + +SP KQ+ SG + + W+ + + GHK +T + + P H
Sbjct: 15 KGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYR-FTGHKDAVTCVQFSPSAH 73
Query: 305 LNHQCRRFASSGKDGAIRIW-DVILSQCVRVLTSHTRSV--TCIRWGGSGLIYSASQDRT 361
L ASS +D +R+W + + V + +HT SV C G L+ +AS D++
Sbjct: 74 L------LASSSRDKTVRLWVPSVKGESV-LFRAHTGSVRSVCFSADGQSLL-TASDDQS 125
Query: 362 IKVWRAS-DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA 420
IK+W ++C TL H +WV S D + V + K A+ + H
Sbjct: 126 IKLWSVHRQKIIC-TLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLI-HTFC 183
Query: 421 K---YQAQC---PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRI 474
+ Y + P + + S D T+ +W+ + L H +N + F P G
Sbjct: 184 EPGGYSSYVDFHPSSTCIATASSDNTVRVWDI-RTHTLLQHYQVHSAAVNALSFHPSGNH 242
Query: 475 IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534
+ +AS D ++K+ D G+ + TL GH + V++S S +D + VW
Sbjct: 243 LLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRTNFD 302
Query: 535 KIE 537
++
Sbjct: 303 SVD 305
Score = 225 (84.3 bits), Expect = 9.5e-16, P = 9.5e-16
Identities = 60/244 (24%), Positives = 111/244 (45%)
Query: 333 RVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
R H ++T + + SG I S S D ++ VW GH V + S
Sbjct: 12 RNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPS 71
Query: 392 -YLMRVEATSTGGFKYDPANPEESS--KHALAKYQAQC--PEGEKLVSGSDDFTLFLWNP 446
+L+ + + P+ ES + ++ C +G+ L++ SDD ++ LW+
Sbjct: 72 AHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSV 131
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
++K + + H + C FSPDG+++ S S D+++KLWD + I T
Sbjct: 132 HRQK-IICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSS 190
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
V + S + + S+D+T++VW+++T + Q H V A+ + P G + + D
Sbjct: 191 YVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDS 250
Query: 567 VLRL 570
L++
Sbjct: 251 TLKI 254
Score = 187 (70.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 51/177 (28%), Positives = 84/177 (47%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH +A+ S+ FSP+G+ +ASGS D +V W++ Q+ ++ G ++ +T
Sbjct: 16 GHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTG-------HKDAVT--CV 66
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
P L D K V V + H +V SV FS +G+SL + S
Sbjct: 67 QFSPSAHLLASSSRD----KTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASD 122
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
D +++ W V Q + H +WV C +SPD + +VS + + WD+S+ + I
Sbjct: 123 DQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLI 179
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 296 (109.3 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 82/285 (28%), Positives = 132/285 (46%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH A+ S FSPN + +A+ S DT + W + ++ YV ++ +L
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYR--------YVGHKDVVTSL- 66
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
P L D K V +S H V SV FS +G+ L + S
Sbjct: 67 QFSPQGNLLASASRD----KTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASE 122
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
D +++ W + Q L+ H HWV C +SPD + +VS ++ I WD+ T KQ
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT-TSKQC--- 178
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+ + ++ F N C AS+G D A+RIWD+ +++ ++ H+ V C+ +
Sbjct: 179 VNNFSDSVGFANFVDFSPNGTC--IASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSF 236
Query: 348 GGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
SG + +AS D T+K+ +G + TL+GH V T++ S D
Sbjct: 237 HPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKD 281
Score = 288 (106.4 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 77/297 (25%), Positives = 133/297 (44%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL 305
+GHK + +SP+ KQ+ + + + W + + + GHK +T+L + P
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-GHKDVVTSLQFSP--- 70
Query: 306 NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364
Q AS+ +D +R+W + +HT V + + G + +AS+D++IKV
Sbjct: 71 --QGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKV 128
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE----ESSKHAL 419
W +L H HWV S D + V + K +D + + S
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGF 188
Query: 420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + P G + S D + +W+ + + L H +NC+ F P G + +AS
Sbjct: 189 ANFVDFSPNGTCIASAGSDHAVRIWDI-RMNRLLQHYQVHSCGVNCLSFHPSGNSLVTAS 247
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI 536
D ++K+ D G+ I TL+GH V+ V++S D L SG AD+ + VW ++
Sbjct: 248 SDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRTSFNQV 304
Score = 276 (102.2 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 74/291 (25%), Positives = 139/291 (47%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
+GHK IT+ + P C++ A++ D + +W + H VT +++
Sbjct: 15 KGHKAAITSADFSP-----NCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFS 69
Query: 349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
G L+ SAS+D+T+++W + H V ++ S D V A+ K
Sbjct: 70 PQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVW 129
Query: 408 PANPEESSKHALAKYQ--AQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
+ ++L ++ +C P+G +VS S+D T+ +W+ K+ + +
Sbjct: 130 SMY-RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTS-KQCVNNFSDSVG 187
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
N V+FSP+G IASA D ++++WD R+ + + + H V +++ LV+ S
Sbjct: 188 FANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTAS 247
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
+D T+K+ ++ ++ L GH V+ V ++ DGE SGG D + +W+
Sbjct: 248 SDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWR 298
Score = 228 (85.3 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 52/167 (31%), Positives = 88/167 (52%)
Query: 407 DPANPEESSKHALAKYQAQ-CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINC 465
DP H A A P +++ + S D L LW+ + ++ R GH+ ++
Sbjct: 7 DPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAY-RYVGHKDVVTS 65
Query: 466 VEFSPDGRIIASASFDKSIKLWD-GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524
++FSP G ++ASAS DK+++LW R GK + + H V V +S+D + LV+ S D
Sbjct: 66 LQFSPQGNLLASASRDKTVRLWVLDRKGKS-SEFKAHTAPVRSVDFSADGQFLVTASEDK 124
Query: 525 TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++KVW+M ++ L H V ++PDG + S +DK +++W
Sbjct: 125 SIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Score = 142 (55.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 45/175 (25%), Positives = 77/175 (44%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S+ H V KFSP+GR + S S D T++ WD T++ +C F +++
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSK----QCVNN---F--SDSVGFA 189
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
D P T D + ++ +R + R H+ V + F P+G SL +
Sbjct: 190 NFVDFSPNGTCIASAGSDHAVR---IWDIR-MNRLLQHYQVHSCGVNCLSFHPSGNSLVT 245
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
S D TV+ D+ ++ +GH V +++S D + SG + + W +S
Sbjct: 246 ASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRTS 300
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 49/189 (25%), Positives = 78/189 (41%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
+S H V SV FS +G+ L + S D +++ W + Q L+ + +V +
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYR--HTHWVRCAKF 152
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL 222
+ ++ T ++ D KQ V S G A V FSPNG +
Sbjct: 153 SPDGRLIVSCSEDKTIKIWDTT-SKQCVNNF-------SDSVGFANFV---DFSPNGTCI 201
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
AS D VR WD+ L + H V C+++ P LV+ +G + D G+
Sbjct: 202 ASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGR 261
Query: 283 QIGQPMRGH 291
I ++GH
Sbjct: 262 LI-YTLQGH 269
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 306 (112.8 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 121/493 (24%), Positives = 219/493 (44%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H + V+ FS + R +A+ S D V+ W+ T + + + VN T +
Sbjct: 657 HEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYD--EHSEQVNCCHFTNN-SH 713
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
L L T +++ + + Q C ++M GH +V +FSP+ + LAS S D
Sbjct: 714 YLLLATASSDCFLKLWDLNQK--------ECRNTMFGHTNSVNHCRFSPDDKLLASCSAD 765
Query: 229 TTVRFWDVTT----------QTPLFKCEGHKHW---VLCIAWSPDSKQLVSGCKNGVIHA 275
T++ WDV + Q L E + V C +WS D +++ KN +
Sbjct: 766 GTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIF-L 824
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
+D TG + + GH I + P NH S + +W+ + C++V
Sbjct: 825 FDIHTGGLLAEIHTGHHSTIQYCDFSP--QNHLAVVALSQC---CVELWN--MDSCLKVA 877
Query: 336 T--SHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVMCRT----LEGHAHWV----N 384
H V C+ + G + ++S D+TI++W +C+ L+ V
Sbjct: 878 DCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKK--VCKNSAIVLKQEIDVVFQENE 935
Query: 385 TLALSTDYLMRVEATS--TGGFKYDPANPEESSKHALAKYQAQC----PEGEKLVSGSDD 438
+ L+ D + R++ + TG Y L + Q C P + + G +D
Sbjct: 936 VMVLAVDNIKRLQLINGKTGQIDY------------LIEAQVSCCCLSPHLQYIAFGGED 983
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL 498
+ + + +R+ GH++ + ++F+ DG+ + S+S D SI++W+ + +++ L
Sbjct: 984 GAVEILELLNNRIFQSRI-GHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVF-L 1041
Query: 499 RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK 558
+ H + V +S+LL S S D T+K+W++ T +IE+D H D V + D +PD K
Sbjct: 1042 QAHQETVKDFKLLKNSKLL-SWSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDISPDATK 1100
Query: 559 VASGGKDKVLRLW 571
+S DK ++W
Sbjct: 1101 FSSTSADKTAKIW 1113
Score = 271 (100.5 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 108/489 (22%), Positives = 196/489 (40%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C ++M GH +V +FSP+ + LAS S D T++ WDV + K F++N E
Sbjct: 736 CRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANER-KSINVKQ-FFLNSEE 793
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVF--QVRPVTRCTSSMPGHAEAVISVKFSPNG 219
+ + ++ + + + +V K +F + GH + FSP
Sbjct: 794 PQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQN 853
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
V W++ + + C GH WV C+ +SPD ++ + I W+
Sbjct: 854 HLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWE-- 911
Query: 280 TGKQIGQPMRGHKQWITALSWEP----FHLNHQCRRFASSGKDGAIR-IWDVILSQCVRV 334
T K KQ I + E +++ R +GK G I + + +S C
Sbjct: 912 TKKVCKNSAIVLKQEIDVVFQENEVMVLAVDNIKRLQLINGKTGQIDYLIEAQVSCCC-- 969
Query: 335 LTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLM 394
L+ H + + +GG +D +++ + + ++ GH V + + D
Sbjct: 970 LSPHLQYIA---FGG--------EDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKT 1018
Query: 395 RVEATSTGGFKYDPANPEES---SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK 451
+ ++ + EE H + + KL+S S D T+ +W+ +
Sbjct: 1019 LISSSDDSSIQVWNWQSEEYVFLQAHQETVKDFKLLKNSKLLSWSFDGTVKIWSIITGRI 1078
Query: 452 SLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS 511
HQ + + SPD +S S DK+ K+W + + LRGH V +S
Sbjct: 1079 E-KDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVFS 1137
Query: 512 SDSRLLVSGSADSTLKVWNMKTKK---------IEQDLPGHGDEVYAVDWAPDGEKVASG 562
DS LL +G + +++WN+ + +E+ HG V + ++PD + + S
Sbjct: 1138 VDSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSA 1197
Query: 563 GKDKVLRLW 571
G L+ W
Sbjct: 1198 GG--YLKWW 1204
Score = 229 (85.7 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 90/392 (22%), Positives = 168/392 (42%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H +AV FS +G+ +AS D T++ + T L + + H+ VLC A+S D + +
Sbjct: 615 HTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIA 674
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ + + W+S TG + H + + F N A++ D +++WD
Sbjct: 675 TCSVDKKVKIWNSMTGGLV-HVYDEHSEQVNCCH---FTNNSHYLLLATASSDCFLKLWD 730
Query: 326 VILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
+ +C + HT SV R+ L+ S S D T+K+W +++ ++N
Sbjct: 731 LNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLN 790
Query: 385 TLALSTDYLMRVEATSTGG-------------FKYDPAN----PE-ESSKHALAKYQAQC 426
+ D + V+ S F +D E + H+ +Y
Sbjct: 791 SEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCDFS 850
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+ V + LWN + K +A GH ++CV FSPDG ++S D++I+L
Sbjct: 851 PQNHLAVVALSQCCVELWNMDSCLK-VADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRL 909
Query: 487 WDGR-IGK-FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG 544
W+ + + K L+ + V+ + ++++ L++ N KT +I+ +
Sbjct: 910 WETKKVCKNSAIVLKQEIDVVFQ----ENEVMVLAVDNIKRLQLINGKTGQIDYLIEA-- 963
Query: 545 DEVYAVDWAPDGEKVASGGKD---KVLRLWQN 573
+V +P + +A GG+D ++L L N
Sbjct: 964 -QVSCCCLSPHLQYIAFGGEDGAVEILELLNN 994
Score = 185 (70.2 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 63/254 (24%), Positives = 113/254 (44%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R S GH + V ++F+ +G++L S S D++++ W+ ++ +F + V +
Sbjct: 995 RIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVFL---QAHQETVKDF 1051
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
++ K + +L T ++ I+ R H + V+S SP+
Sbjct: 1052 KLLKN-SKLLSWSFDGTVKIWSII-----------TGRIEKDFVCHQDTVLSCDISPDAT 1099
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+S S D T + W +PL + GHK V C +S DS L +G NG I W+ S
Sbjct: 1100 KFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSN 1159
Query: 281 GK--QIGQPM---RG---HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
G+ + P+ G H W+T L + P + S+G G ++ W+V+ +
Sbjct: 1160 GELLHLCAPILVEEGAATHGGWVTDLCFSP-----DSKMLVSAG--GYLKWWNVVTGESS 1212
Query: 333 RVLTSHTRSVTCIR 346
+ T +T TC++
Sbjct: 1213 Q--TFYTNG-TCLK 1223
Score = 174 (66.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 86/358 (24%), Positives = 156/358 (43%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH V V FSP+G S + S D T+R W+ T + C K+ + + D +
Sbjct: 881 GHLSWVHCVMFSPDGSSFLTSSDDQTIRLWE-TKKV----C---KNSAIVLKQEID---V 929
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
V ++ A D+ Q+ G ++ L+ + A G+DGA+ I
Sbjct: 930 VFQENEVMVLAVDNIKRLQLINGKTGQIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEIL 989
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW--RASDGVMCR----TLE 377
+++ ++ + H ++V I++ G + S+S D +I+VW ++ + V + T++
Sbjct: 990 ELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVFLQAHQETVK 1049
Query: 378 GHAHWVNT--LALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG 435
N+ L+ S D +++ + TG + D +++ P+ K S
Sbjct: 1050 DFKLLKNSKLLSWSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDIS-----PDATKFSST 1104
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF- 494
S D T +W+ E L + GH+ + C FS D ++A+ + I++W+ G+
Sbjct: 1105 SADKTAKIWSFEL-LSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGELL 1163
Query: 495 -----ITTLRG---HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG 544
I G H V + +S DS++LVS A LK WN+ T + Q +G
Sbjct: 1164 HLCAPILVEEGAATHGGWVTDLCFSPDSKMLVS--AGGYLKWWNVVTGESSQTFYTNG 1219
Score = 156 (60.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 45/166 (27%), Positives = 80/166 (48%)
Query: 411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL-WNPEKEKKSLARMT--GHQQLINCVE 467
PE S + AK QA+ +++ G L+L W +K K+L+R+ H +
Sbjct: 572 PETSEVYQQAKLQAK----QEVDHGM----LYLEWINKKNIKNLSRLVVRPHTDAVYHAC 623
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527
FS DG+ IAS DK+++++ G+ + ++ H V A+S+D R + + S D +K
Sbjct: 624 FSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVK 683
Query: 528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV--ASGGKDKVLRLW 571
+WN T + H ++V + + + A+ D L+LW
Sbjct: 684 IWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLW 729
Score = 48 (22.0 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 12/51 (23%), Positives = 28/51 (54%)
Query: 6 DKITTKRILTRFKSDDGEVAG-DLLDLPLNVNTEHLSLIVNSLLQQDEGTP 55
D + + + +SD G+ G ++L L +N+ L +S++++ +G+P
Sbjct: 272 DSVMGPKYIVAVESDLGKEKGLEILSLFVNMKKADLPEQAHSIIKECKGSP 322
Score = 38 (18.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 323 IWDV-IL----SQCVRVLTSHTRSVT 343
IWD IL +QC +LT+ +SVT
Sbjct: 246 IWDSWILKAFDNQCQILLTTRDKSVT 271
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 249 (92.7 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 79/301 (26%), Positives = 138/301 (45%)
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEP--- 302
GH + + WS DSK LVS ++G + WD+ +T K P+R W+ ++ P
Sbjct: 53 GHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRS--SWVMTCAYAPSGN 110
Query: 303 F----HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ 358
F L++ C + ++G +++ R L++HT ++C R+ I ++S
Sbjct: 111 FVACGGLDNMCSIYNLKTREGNVKV--------SRELSAHTGYLSCCRFLDDNSIVTSSG 162
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANP---EES 414
D T +W G GH +LA+S D+ + + K +D +
Sbjct: 163 DTTCALWDIETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTF 222
Query: 415 SKHALAKYQAQC--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI---NCVEFS 469
S H + A C P GE + +GSDD T L++ +++ + + H+ +I V FS
Sbjct: 223 SGHE-SDINAICFFPNGEAICTGSDDATCRLFDLRADQELI--VYSHESIICGITSVAFS 279
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
GR++ + D + +WD + + L GH V + ++D + +GS DS LK+W
Sbjct: 280 RSGRLLLAGYDDFNCNIWDSLKAERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Query: 530 N 530
N
Sbjct: 340 N 340
Score = 207 (77.9 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 58/208 (27%), Positives = 96/208 (46%)
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK-HAL---AKYQAQC--- 426
RTL GH + + STD + V A+ G K + ++K HA+ + + C
Sbjct: 49 RTLRGHLAKIYAMHWSTDSKLLVSASQDG--KLIVWDTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 427 PEGEKLVSGSDDFTLFLWN---PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
P G + G D ++N E K ++ H ++C F D I+ S+ D +
Sbjct: 107 PSGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNSIVTSSG-DTT 165
Query: 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
LWD G+ T GH +A S D +L +SG+ D+T K+W+++ Q GH
Sbjct: 166 CALWDIETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGH 225
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++ A+ + P+GE + +G D RL+
Sbjct: 226 ESDINAICFFPNGEAICTGSDDATCRLF 253
Score = 202 (76.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 68/298 (22%), Positives = 127/298 (42%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+RGH I A+ W + S+ +DG + +WD + V + + V +
Sbjct: 51 LRGHLAKIYAMHWST-----DSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAY 105
Query: 348 GGSG-LIYSASQDRTIKVW--RASDG--VMCRTLEGHAHWVNTLALSTDYLMRVEATSTG 402
SG + D ++ + +G + R L H +++ D + + T
Sbjct: 106 APSGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNSIVTSSGDTT 165
Query: 403 GFKYDPANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
+D ++ K + C P+ + +SG+ D T LW+ +E
Sbjct: 166 CALWDIETGQQ--KTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWDV-REGTCRQTF 222
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK--FITTLRGHVQAVYMVAWSSDS 514
+GH+ IN + F P+G I + S D + +L+D R + + + + + VA+S
Sbjct: 223 SGHESDINAICFFPNGEAICTGSDDATCRLFDLRADQELIVYSHESIICGITSVAFSRSG 282
Query: 515 RLLVSGSADSTLKVWN-MKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
RLL++G D +W+ +K +++ L GH + V + DG VA+G D L++W
Sbjct: 283 RLLLAGYDDFNCNIWDSLKAERVGI-LSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Score = 201 (75.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 75/343 (21%), Positives = 143/343 (41%)
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
++ K +AD T + IV + V +++ TR T + GH + ++ +S + +
Sbjct: 13 QLKKQIADARKACADTT--LAQIVSGVEVVGRIQMRTRRT--LRGHLAKIYAMHWSTDSK 68
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
L S S D + WD T + WV+ A++P + G + + ++ T
Sbjct: 69 LLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKT 128
Query: 281 GK---QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS 337
+ ++ + + H +++ + L+ SSG D +WD+ Q V
Sbjct: 129 REGNVKVSRELSAHTGYLSCCRF----LDDNSI-VTSSG-DTTCALWDIETGQQKTVFLG 182
Query: 338 HTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
HT + L S + D T K+W +G +T GH +N + +
Sbjct: 183 HTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESDINAIC----FFPNG 238
Query: 397 EATSTGGFK-----YDPANPEE----SSKHALAKYQ--AQCPEGEKLVSGSDDFTLFLWN 445
EA TG +D +E S + + A G L++G DDF +W+
Sbjct: 239 EAICTGSDDATCRLFDLRADQELIVYSHESIICGITSVAFSRSGRLLLAGYDDFNCNIWD 298
Query: 446 PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
K ++ + ++GH ++C+ + DG +A+ S+D +K+W+
Sbjct: 299 SLKAER-VGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 141 (54.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 124 SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183
S+ + SGDTT WD+ T G ++ T +LA V P L D
Sbjct: 156 SIVTSSGDTTCALWDIET--------GQQKTVFLGHTGDCMSLA-VSPDFKLFISGACDA 206
Query: 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF 243
+ ++ VR T C + GH + ++ F PNG ++ +GS D T R +D+ L
Sbjct: 207 TAK---LWDVREGT-CRQTFSGHESDINAICFFPNGEAICTGSDDATCRLFDLRADQELI 262
Query: 244 KCEGHKHWVLC----IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITAL 298
H+ ++C +A+S + L++G + + WDS +++G + GH ++ L
Sbjct: 263 -VYSHES-IICGITSVAFSRSGRLLLAGYDDFNCNIWDSLKAERVGI-LSGHDNRVSCL 318
Score = 58 (25.5 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 64 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 123
++ K +AD T + IV + V +++ TR T + GH + ++ +S + +
Sbjct: 13 QLKKQIADARKACADTT--LAQIVSGVEVVGRIQMRTRRT--LRGHLAKIYAMHWSTDSK 68
Query: 124 SLASGSGDTTVRFWDVTT 141
L S S D + WD T
Sbjct: 69 LLVSASQDGKLIVWDTYT 86
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 277 (102.6 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 81/274 (29%), Positives = 134/274 (48%)
Query: 314 SSGKDGAIRIWDVILSQC--VRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDG 370
SSG D I IW V C V ++ H+ +V + G I++ S D+T+ W + G
Sbjct: 72 SSGFDRQIYIWQVY-EDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATG 130
Query: 371 VMCRTLEGHAHWVNTLALST-DYLMRVEATSTGGFKYDPANPEESSKHAL-AKYQ--AQC 426
R +GH ++VN++ S + + K A + ++ H L + +Q A C
Sbjct: 131 QRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAA-HTLESPFQVTAVC 189
Query: 427 --PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI 484
GE+++SG D + +W+ K+ L + GH I + SP+G I + + D ++
Sbjct: 190 FGDTGEQVISGGIDNEVKIWDIRKQAV-LHHLRGHSDTITGMSLSPEGDFILTNAMDNTL 248
Query: 485 KLWDGRI---G-KFITTLRGHV----QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI 536
++WD R G + + +GH + + AWS S + SGSAD + +W++ T++I
Sbjct: 249 RVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRI 308
Query: 537 EQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL 570
LPGH V AVD++P + SG DK L L
Sbjct: 309 LYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYL 342
Score = 239 (89.2 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 72/300 (24%), Positives = 133/300 (44%)
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP-LFKCEGHKHWVLCIAWSPDS 261
+ GH + + +F P G L S D + W V + GH V+ ++PD
Sbjct: 51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDG 110
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG-A 320
+ + + + WD +TG++ + +GH ++ ++ + + ++ SG D
Sbjct: 111 SHIFTCSTDKTLAFWDIATGQR-QRRFKGHGNFVNSVQG-----SRRGQQLLCSGSDDRT 164
Query: 321 IRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGH 379
I+IWD L S + VT + +G +G + S D +K+W + L GH
Sbjct: 165 IKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGH 223
Query: 380 AHWVNTLALST--DYLMRVEATST-GGFKYDPANPEE-------SSKHALAKYQAQC--- 426
+ + ++LS D+++ +T + P P E +H K +C
Sbjct: 224 SDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWS 283
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P +K+ SGS D +++W+ ++ L ++ GH +N V+FSP +I S S DK++ L
Sbjct: 284 PGSDKITSGSADRHVYIWDVNT-RRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYL 342
Score = 212 (79.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 49/146 (33%), Positives = 77/146 (52%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
PEGE L+S D +++W ++ +++ M+GH + F+PDG I + S DK++
Sbjct: 65 PEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAF 124
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSS-DSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD 545
WD G+ +GH V V S +LL SGS D T+K+W+ + K L
Sbjct: 125 WDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPF- 183
Query: 546 EVYAVDWAPDGEKVASGGKDKVLRLW 571
+V AV + GE+V SGG D +++W
Sbjct: 184 QVTAVCFGDTGEQVISGGIDNEVKIW 209
Score = 206 (77.6 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 48/167 (28%), Positives = 83/167 (49%)
Query: 407 DPANPEESSKHALAKYQAQ-CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINC 465
D N S H+ A +A P+G + + S D TL W+ ++ R GH +N
Sbjct: 87 DCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQ-RRFKGHGNFVNS 145
Query: 466 VEFSPDGR-IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524
V+ S G+ ++ S S D++IK+WD R TL Q V V + ++SG D+
Sbjct: 146 VQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDN 204
Query: 525 TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+K+W+++ + + L GH D + + +P+G+ + + D LR+W
Sbjct: 205 EVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVW 251
Score = 196 (74.1 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 76/304 (25%), Positives = 125/304 (41%)
Query: 239 QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITAL 298
Q P+ + EGH+ + + P+ + L+S + I+ W + M GH +
Sbjct: 45 QAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEA 104
Query: 299 SWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG--GSGLIYSA 356
+ P +H F S D + WD+ Q R H V ++ G L+ S
Sbjct: 105 HFTPDG-SHI---FTCS-TDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSG 159
Query: 357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK 416
S DRTIK+W A TLE V + + K +++
Sbjct: 160 SDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIR-KQAVL 217
Query: 417 HALAKYQ------AQCPEGEKLVSGSDDFTLFLWN--PEKEKKSLARM-TGHQQ-----L 462
H L + + PEG+ +++ + D TL +W+ P + ++ GHQ L
Sbjct: 218 HHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNL 277
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
+ C +SP I S S D+ + +WD + + L GH +V V +S L++SGS+
Sbjct: 278 LRCA-WSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSS 336
Query: 523 DSTL 526
D TL
Sbjct: 337 DKTL 340
Score = 186 (70.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 68/281 (24%), Positives = 119/281 (42%)
Query: 93 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEG 150
++QV +M GH+ AV+ F+P+G + + S D T+ FWD+ T + FK G
Sbjct: 81 IWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHG 140
Query: 151 TPYLFYVNETEITKTLADVLPLDTLN-TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEA 209
+VN + ++ +L + + T ++ D +K A T P A
Sbjct: 141 N----FVNSVQGSRRGQQLLCSGSDDRTIKIWD-ARKKHAAH--------TLESPFQVTA 187
Query: 210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
V F G + SG D V+ WD+ Q L GH + ++ SP+ +++
Sbjct: 188 VC---FGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAM 244
Query: 270 NGVIHAWDS---STGKQIGQPMRGHK----QWITALSWEPFHLNHQCRRFASSGKDGAIR 322
+ + WD + G++ + +GH+ + + +W P + S D +
Sbjct: 245 DNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSP-----GSDKITSGSADRHVY 299
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTI 362
IWDV + + L H SV + + LI S S D+T+
Sbjct: 300 IWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTL 340
Score = 184 (69.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 52/198 (26%), Positives = 92/198 (46%)
Query: 190 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHK 249
++QV +M GH+ AV+ F+P+G + + S D T+ FWD+ T + +GH
Sbjct: 81 IWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHG 140
Query: 250 HWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQ 308
++V + S +QL+ SG + I WD+ K + Q +TA+ +
Sbjct: 141 NFVNSVQGSRRGQQLLCSGSDDRTIKIWDARK-KHAAHTLESPFQ-VTAVCF-----GDT 193
Query: 309 CRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRA 367
+ S G D ++IWD+ + L H+ ++T + G I + + D T++VW
Sbjct: 194 GEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDV 253
Query: 368 ---SDGVMC-RTLEGHAH 381
+ G C + +GH H
Sbjct: 254 RPYAPGERCVKVFQGHQH 271
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 33/121 (27%), Positives = 65/121 (53%)
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG-KFITTLRGHVQAVYMVAWS 511
+ ++ GH+ I EF P+G ++ S+ FD+ I +W + + + GH AV ++
Sbjct: 48 IMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFT 107
Query: 512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV-ASGGKDKVLRL 570
D + + S D TL W++ T + ++ GHG+ V +V + G+++ SG D+ +++
Sbjct: 108 PDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKI 167
Query: 571 W 571
W
Sbjct: 168 W 168
Score = 136 (52.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 43/166 (25%), Positives = 67/166 (40%)
Query: 113 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPL 172
V +V F G + SG D V+ WD+ Q L G ++T +L+ P
Sbjct: 185 VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGH------SDTITGMSLS---PE 235
Query: 173 DTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHA----EAVISVKFSPNGRSLASGSGD 228
+D + V P RC GH + ++ +SP + SGS D
Sbjct: 236 GDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSAD 295
Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH 274
V WDV T+ L+K GH V + +SP ++SG + ++
Sbjct: 296 RHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLY 341
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 277 (102.6 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 85/300 (28%), Positives = 136/300 (45%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVR--VLTSHTRSVTCI 345
+ GH + A+ ++P + AS D +I +W+ QC +L+ H ++ +
Sbjct: 62 LTGHSGEVFAVRFDP-----TAQHIASGSMDRSILLWNTY-GQCENYGILSGHKGAILDL 115
Query: 346 RWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST-DYLMRVEATSTGG 403
+W S I+SAS D T+ W G R GH +N++ +S M V A+ G
Sbjct: 116 QWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGT 175
Query: 404 FK-YDPANPE--ESSKHALA-KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
+DP E + + L AQ G ++ SG D + +W+ K K + M GH
Sbjct: 176 MGIWDPRQKEAIDYLETELPITAVAQSEAGNEVFSGGIDNAIHVWDIRK-KAIVYSMAGH 234
Query: 460 QQLINCVEFSPDGRIIASASFDKSIKLWDGR----IGKFITTLRGHV----QAVYMVAWS 511
I +E SPD + + S SFD +++ WD R + I T G + + +W+
Sbjct: 235 MDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWN 294
Query: 512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV-ASGGKDKVLRL 570
+ +GS D ++ VW+ KT KI LPGH V V + P+ E + S D+ L L
Sbjct: 295 PAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLML 354
Score = 273 (101.2 bits), Expect = 5.3e-23, P = 5.3e-23
Identities = 86/322 (26%), Positives = 154/322 (47%)
Query: 188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-E 246
QAV + + + GH+ V +V+F P + +ASGS D ++ W+ Q +
Sbjct: 47 QAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGILS 106
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLN 306
GHK +L + WS DSK + S + + +WD +G++I + + GH++ I ++
Sbjct: 107 GHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYI-GHEEVINSVE---ISKR 162
Query: 307 HQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVW 365
Q S+ DG + IWD + + L + +T + +G ++S D I VW
Sbjct: 163 GQ-EMLVSASDDGTMGIWDPRQKEAIDYLETEL-PITAVAQSEAGNEVFSGGIDNAIHVW 220
Query: 366 RASDGVMCRTLEGHAHWVNTLALSTDY--LMR--VEAT-STGGFK-YDPANPE----ESS 415
+ ++ GH + +L +S D L+ ++T T + + P N + +
Sbjct: 221 DIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGA 280
Query: 416 KHALAKYQAQC---PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG 472
L K + P G+K+ +GS D ++ +W+ K K L ++ GH+ +N V F+P+
Sbjct: 281 PVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWD-FKTGKILYKLPGHKGTVNDVRFTPNN 339
Query: 473 R-IIASASFDKSIKLWDGRIGK 493
II SAS D+++ L G +GK
Sbjct: 340 EPIIVSASSDRNLML--GELGK 359
Score = 197 (74.4 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 73/280 (26%), Positives = 128/280 (45%)
Query: 314 SSGKDGAIRIWDVI----LSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRAS 368
SSG+DG + + V L+ + LT H+ V +R+ + I S S DR+I +W
Sbjct: 38 SSGQDGTL-VQAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTY 96
Query: 369 DGVMCRT---LEGHAHWVNTLALSTDYLMRVEATSTGGF-KYDPANPEESSKH-----AL 419
C L GH + L S D A++ +D + + ++ +
Sbjct: 97 G--QCENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVI 154
Query: 420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
+ E LVS SDD T+ +W+P ++K+++ + I V S G + S
Sbjct: 155 NSVEISKRGQEMLVSASDDGTMGIWDP-RQKEAIDYLETELP-ITAVAQSEAGNEVFSGG 212
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK----TKK 535
D +I +WD R + ++ GH+ + + S DS+ L+S S DST++ W+++ T +
Sbjct: 213 IDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNR 272
Query: 536 IEQDLPGH--GDE--VYAVDWAPDGEKVASGGKDKVLRLW 571
+ G G E + W P G+K+A+G D+ + +W
Sbjct: 273 HIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVW 312
Score = 184 (69.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 64/268 (23%), Positives = 119/268 (44%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
+ GH A++ +++S + +++ S S D T+ WD+ + + + G + +N EI+K
Sbjct: 105 LSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEV--INSVEISKR 162
Query: 166 LADVL-PLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
++L T + D QK+A+ + + +P + +V S G + S
Sbjct: 163 GQEMLVSASDDGTMGIWD-PRQKEAIDYLE------TELP-----ITAVAQSEAGNEVFS 210
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD----SST 280
G D + WD+ + ++ GH + + SPDS+ L+S + + WD + T
Sbjct: 211 GGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPT 270
Query: 281 GKQI----GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT 336
+ I G P+ K I A SW P + A+ D ++ +WD + + L
Sbjct: 271 NRHIRTYDGAPVGLEKNLIRA-SWNPAG-----DKIAAGSGDRSVVVWDFKTGKILYKLP 324
Query: 337 SHTRSVTCIRW--GGSGLIYSASQDRTI 362
H +V +R+ +I SAS DR +
Sbjct: 325 GHKGTVNDVRFTPNNEPIIVSASSDRNL 352
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 76/300 (25%), Positives = 117/300 (39%)
Query: 91 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG 150
QAV + + + GH+ V +V+F P + +ASGS D ++ W+ Q CE
Sbjct: 47 QAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQ-----CEN 101
Query: 151 TPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAV 210
Y L T+ + D+ + + + R GH E +
Sbjct: 102 --YGILSGHKGAILDLQWSRDSKTIFSASA-DMTLASWDIESGQRIRRYI----GHEEVI 154
Query: 211 ISVKFSPNGRS-LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
SV+ S G+ L S S D T+ WD + + E + +A S ++ SG
Sbjct: 155 NSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETELP-ITAVAQSEAGNEVFSGGI 213
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS 329
+ IH WD K I M GH IT+L P F S+ + IR + +
Sbjct: 214 DNAIHVWDIRK-KAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPF-APTN 271
Query: 330 QCVRVLTSHTRSV--TCIR--WGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
+ +R + IR W +G I + S DR++ VW G + L GH VN
Sbjct: 272 RHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVN 331
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 198 (74.8 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 45/150 (30%), Positives = 81/150 (54%)
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMT-----GHQQLINCVEFSPDGRIIASASFDK 482
E + LV+GS D T+ W S+ + + H + IN ++ SP+ A+AS+DK
Sbjct: 441 EPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDK 500
Query: 483 SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG 542
K+W G+ I L+GH + ++ + + +L+V+GS D T+KVW++ ++ L G
Sbjct: 501 LGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEG 560
Query: 543 HGDEVYAVDWAP-DGEKVASGGKDKVLRLW 571
H + V V + + ++ S G D +++LW
Sbjct: 561 HTNSVQRVKFFNREHPQLLSCGADGLIKLW 590
Score = 178 (67.7 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 74/314 (23%), Positives = 135/314 (42%)
Query: 205 GHAEAV--ISVKFSPNG-RSLASGSGDTTVRFWDV-TTQTPLFKCE-----GHKHWVLCI 255
GHA A+ IS+ S N + L +GS D T++ W + T + K H + I
Sbjct: 425 GHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSI 484
Query: 256 AWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS 315
SP+ + + + + W + +G+ IG ++GHK+ + +++ F + +
Sbjct: 485 DVSPNDEYFATASYDKLGKVWQTDSGETIGV-LKGHKRGLWDINFYKFD-----KLIVTG 538
Query: 316 GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMC 373
D I++W ++ C + L HT SV +++ + S D IK+W G +
Sbjct: 539 SGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEII 598
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV 433
++L+ H + + L D A + G + N EE K + QA+ EK +
Sbjct: 599 KSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEEEVK--FKELQAK----EK-I 651
Query: 434 SGSDDFTLFLWNPEKEKKSLARMT-GHQ-QLINCVEFSPDGR-----IIASASFDKSIKL 486
+ ++ N + L +T H +L N ++ S + II S S + +I L
Sbjct: 652 EQEQSLSNYIKNKDWSNAFLLALTLDHSMRLYNVIKSSIETNEDKDSIIGSFSLENTISL 711
Query: 487 WD-GRIGKFITTLR 499
D G++ K +R
Sbjct: 712 LDDGQLVKLFKKIR 725
Score = 168 (64.2 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 47/159 (29%), Positives = 79/159 (49%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
PE L ++ L + + EK + L GH ++N V+ S DG+ IA+AS D +L
Sbjct: 349 PEFNLLAMATNSPALRIVDIEKPLE-LRVYEGHTDILNAVDVSTDGKWIATASKDNEARL 407
Query: 487 W--DGRIGKF--ITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVW------NMKT 533
W +G + F +GH A+ ++ S ++ + LV+GS D T+K W N
Sbjct: 408 WRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIV 467
Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
K E H ++ ++D +P+ E A+ DK+ ++WQ
Sbjct: 468 KTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQ 506
Score = 155 (59.6 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 43/170 (25%), Positives = 76/170 (44%)
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL--FKCEGHKHWVLCIAWSPD 260
+PG E + ++ +P+G LA S +R +D+ + + FK V +
Sbjct: 56 IPGDGEVITNLTITPDGSYLAMISQSQLLRIFDLNKGSVIKNFKLPSP---VYISSVDST 112
Query: 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
S G +GVI WD G + ++GH I +L++ LN Q R AS G
Sbjct: 113 SSLFAFGGSDGVITVWDIENG-YVTHSLKGHGTTICSLTFHG-ELNSQDWRLASGDTMGT 170
Query: 321 IRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASD 369
++IWD++ +C+ L H +V + + G L S +D + ++ +
Sbjct: 171 VKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKN 220
Score = 151 (58.2 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 39/146 (26%), Positives = 69/146 (47%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P E + S D +W + + ++ + GH++ + + F ++I + S DK+IK+
Sbjct: 488 PNDEYFATASYDKLGKVWQTDSGE-TIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKV 546
Query: 487 WDGRIGKFITTLRGHVQAVYMVAW-SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD 545
W TL GH +V V + + + L+S AD +K+W+ K +I + L H
Sbjct: 547 WSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQ 606
Query: 546 EVYAVDWAPDGEKVASGGKDKVLRLW 571
++A+D DGE + D L W
Sbjct: 607 RIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 147 (56.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 55/266 (20%), Positives = 110/266 (41%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFW----DVTTQTPLFKCEGTPYLFYVNETEIT 163
GH + + +V S +G+ +A+ S D R W ++ P + +G + + ++
Sbjct: 379 GHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQG--HAGAITAISLS 436
Query: 164 KTLADVLPLDTLNTEEVVD---IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
K+ + L T +T+ + I ++ + TR H + + S+ SPN
Sbjct: 437 KSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTR-----RAHDKDINSIDVSPNDE 491
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
A+ S D + W + + +GHK + I + K +V+G + I W S
Sbjct: 492 YFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVW-SLL 550
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR 340
+ + GH + + + F+ H + S G DG I++WD + ++ L +H +
Sbjct: 551 DFSCKKTLEGHTNSVQRVKF--FNREHP--QLLSCGADGLIKLWDYKQGEIIKSLDNHDQ 606
Query: 341 SVTCIRWGGSGLIYS-ASQDRTIKVW 365
+ + G ++ A D + W
Sbjct: 607 RIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 123 (48.4 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 53/226 (23%), Positives = 97/226 (42%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
+PG E + ++ +P+G LA S +R +D+ + + K P Y++ + T +
Sbjct: 56 IPGDGEVITNLTITPDGSYLAMISQSQLLRIFDLNKGS-VIKNFKLPSPVYISSVDSTSS 114
Query: 166 LADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP--NGRSLA 223
L D + T V DI + V T S+ GH + S+ F N +
Sbjct: 115 LFAFGGSDGVIT--VWDI--ENGYV---------THSLKGHGTTICSLTFHGELNSQDWR 161
Query: 224 SGSGDT--TVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
SGDT TV+ WD+ + + + H V + + D +SG ++ V+ +++
Sbjct: 162 LASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNF 221
Query: 282 KQIGQ-PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
K I P+ + I A + + Q F + G + ++IWD+
Sbjct: 222 KTINTFPIN---EQIEAAGFVSLIDDRQY--FYTGGSENVLKIWDI 262
Score = 121 (47.7 bits), Expect = 0.00086, P = 0.00086
Identities = 40/145 (27%), Positives = 68/145 (46%)
Query: 435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF-----SPDGRIIASASFDKSIKLWDG 489
G D + +W+ E + + + GH I + F S D R+ AS ++K+WD
Sbjct: 119 GGSDGVITVWDIENGYVTHS-LKGHGTTICSLTFHGELNSQDWRL-ASGDTMGTVKIWDL 176
Query: 490 RIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYA 549
+ I TL+ H AV V + D L +SG D+ + ++N K K P + +++ A
Sbjct: 177 VKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPIN-EQIEA 235
Query: 550 ---VDWAPDGEKVASGGKDKVLRLW 571
V D + +GG + VL++W
Sbjct: 236 AGFVSLIDDRQYFYTGGSENVLKIW 260
Score = 120 (47.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 64/303 (21%), Positives = 116/303 (38%)
Query: 205 GHAEAVISVKF-SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ 263
G+ + +K+ P LA + +R D+ L EGH + + S D K
Sbjct: 336 GNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKW 395
Query: 264 LVSGCKNGVIHAWDSSTGKQIGQPM---RGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
+ + K+ W + Q +P +GH ITA+S ++ + + D
Sbjct: 396 IATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQ--NEPKFLVTGSTDLT 453
Query: 321 IRIWDVILSQCVRVLTS------HTRSVTCIRWGGSGLIYS-ASQDRTIKVWRASDGVMC 373
I+ W + + V TS H + + I + ++ AS D+ KVW+ G
Sbjct: 454 IKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETI 513
Query: 374 RTLEGHAH--W-VNTLALSTDYLMRVEATSTGGFK------YDPANPEESSKHALAKYQA 424
L+GH W +N D L+ V + K + E +++ + +
Sbjct: 514 GVLKGHKRGLWDINFYKF--DKLI-VTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKF 570
Query: 425 QCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI 484
E +L+S D + LW+ K+ + + + H Q I ++ DG +A D +
Sbjct: 571 FNREHPQLLSCGADGLIKLWD-YKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKL 629
Query: 485 KLW 487
W
Sbjct: 630 SFW 632
Score = 119 (46.9 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 53/216 (24%), Positives = 91/216 (42%)
Query: 338 HTRSVTCIRWGGSG----LIYSASQDRTIKVWRASD--GVMCRTLE----GHAHWVNTLA 387
H ++T I S + + S D TIK W+ + + +T E H +N++
Sbjct: 426 HAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSID 485
Query: 388 LST--DYLMRVEATSTGG-FKYDPANPEESSK-HALAKYQAQCPEGEKL-VSGSDDFTLF 442
+S +Y G ++ D K H + + +KL V+GS D T+
Sbjct: 486 VSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIK 545
Query: 443 LWN--PEKEKKSLARMTGHQQLINCVEF-SPDGRIIASASFDKSIKLWDGRIGKFITTLR 499
+W+ KK+L GH + V+F + + + S D IKLWD + G+ I +L
Sbjct: 546 VWSLLDFSCKKTLE---GHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLD 602
Query: 500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
H Q ++ + +D + AD L W T++
Sbjct: 603 NHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEE 638
Score = 83 (34.3 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 36/165 (21%), Positives = 59/165 (35%)
Query: 126 ASGSGDTTVRFWDVTTQ--TPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183
A G D + WD+ T K GT E+ + DT+ T ++ D+
Sbjct: 117 AFGGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDL 176
Query: 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL- 242
V + RC ++ H AV V F +G SG D V ++ +
Sbjct: 177 VKR-----------RCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTIN 225
Query: 243 -FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ 286
F ++ D + +G V+ WD +G+ IG+
Sbjct: 226 TFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDIKSGEMIGR 270
Score = 76 (31.8 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 41/192 (21%), Positives = 71/192 (36%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
G A IS NG L + + V ++ T ++K G + + +PD L
Sbjct: 19 GGTSASISTS---NGELLLATPLNEDVIITNLDTNEIIYKIPGDGEVITNLTITPDGSYL 75
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
++ ++ +D + G I +I+++ + FA G DG I +W
Sbjct: 76 AMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSV-------DSTSSLFAFGGSDGVITVW 128
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGG---SGLIYSASQDR--TIKVWRASDGVMCRTLEGH 379
D+ L H ++ + + G S AS D T+K+W TL+ H
Sbjct: 129 DIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDH 188
Query: 380 AHWVNTLALSTD 391
V + D
Sbjct: 189 NTAVRGVGFDQD 200
Score = 65 (27.9 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 32/140 (22%), Positives = 61/140 (43%)
Query: 8 ITTKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITK 67
+ T I+ + D GEV + +L + + +L++I S L + +F +N+ + K
Sbjct: 47 LDTNEIIYKIPGD-GEV---ITNLTITPDGSYLAMISQSQLLR------IFDLNKGSVIK 96
Query: 68 T--LADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTR--CTSSMPGHAEAVISVKFSP--N 121
L + + ++++ + V V + T S+ GH + S+ F N
Sbjct: 97 NFKLPSPVYISSVDSTSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELN 156
Query: 122 GRSLASGSGDT--TVRFWDV 139
+ SGDT TV+ WD+
Sbjct: 157 SQDWRLASGDTMGTVKIWDL 176
Score = 52 (23.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 19/59 (32%), Positives = 25/59 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNE 159
RC ++ H AV V F +G SG D V ++ T FK T F +NE
Sbjct: 180 RCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYN----TKNFKTINT---FPINE 231
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 198 (74.8 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 45/150 (30%), Positives = 81/150 (54%)
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMT-----GHQQLINCVEFSPDGRIIASASFDK 482
E + LV+GS D T+ W S+ + + H + IN ++ SP+ A+AS+DK
Sbjct: 441 EPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDK 500
Query: 483 SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG 542
K+W G+ I L+GH + ++ + + +L+V+GS D T+KVW++ ++ L G
Sbjct: 501 LGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEG 560
Query: 543 HGDEVYAVDWAP-DGEKVASGGKDKVLRLW 571
H + V V + + ++ S G D +++LW
Sbjct: 561 HTNSVQRVKFFNREHPQLLSCGADGLIKLW 590
Score = 178 (67.7 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 74/314 (23%), Positives = 135/314 (42%)
Query: 205 GHAEAV--ISVKFSPNG-RSLASGSGDTTVRFWDV-TTQTPLFKCE-----GHKHWVLCI 255
GHA A+ IS+ S N + L +GS D T++ W + T + K H + I
Sbjct: 425 GHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSI 484
Query: 256 AWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS 315
SP+ + + + + W + +G+ IG ++GHK+ + +++ F + +
Sbjct: 485 DVSPNDEYFATASYDKLGKVWQTDSGETIGV-LKGHKRGLWDINFYKFD-----KLIVTG 538
Query: 316 GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMC 373
D I++W ++ C + L HT SV +++ + S D IK+W G +
Sbjct: 539 SGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEII 598
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV 433
++L+ H + + L D A + G + N EE K + QA+ EK +
Sbjct: 599 KSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEEEVK--FKELQAK----EK-I 651
Query: 434 SGSDDFTLFLWNPEKEKKSLARMT-GHQ-QLINCVEFSPDGR-----IIASASFDKSIKL 486
+ ++ N + L +T H +L N ++ S + II S S + +I L
Sbjct: 652 EQEQSLSNYIKNKDWSNAFLLALTLDHSMRLYNVIKSSIETNEDKDSIIGSFSLENTISL 711
Query: 487 WD-GRIGKFITTLR 499
D G++ K +R
Sbjct: 712 LDDGQLVKLFKKIR 725
Score = 168 (64.2 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 47/159 (29%), Positives = 79/159 (49%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
PE L ++ L + + EK + L GH ++N V+ S DG+ IA+AS D +L
Sbjct: 349 PEFNLLAMATNSPALRIVDIEKPLE-LRVYEGHTDILNAVDVSTDGKWIATASKDNEARL 407
Query: 487 W--DGRIGKF--ITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVW------NMKT 533
W +G + F +GH A+ ++ S ++ + LV+GS D T+K W N
Sbjct: 408 WRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIV 467
Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
K E H ++ ++D +P+ E A+ DK+ ++WQ
Sbjct: 468 KTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQ 506
Score = 155 (59.6 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 43/170 (25%), Positives = 76/170 (44%)
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL--FKCEGHKHWVLCIAWSPD 260
+PG E + ++ +P+G LA S +R +D+ + + FK V +
Sbjct: 56 IPGDGEVITNLTITPDGSYLAMISQSQLLRIFDLNKGSVIKNFKLPSP---VYISSVDST 112
Query: 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
S G +GVI WD G + ++GH I +L++ LN Q R AS G
Sbjct: 113 SSLFAFGGSDGVITVWDIENG-YVTHSLKGHGTTICSLTFHG-ELNSQDWRLASGDTMGT 170
Query: 321 IRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASD 369
++IWD++ +C+ L H +V + + G L S +D + ++ +
Sbjct: 171 VKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKN 220
Score = 151 (58.2 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 39/146 (26%), Positives = 69/146 (47%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P E + S D +W + + ++ + GH++ + + F ++I + S DK+IK+
Sbjct: 488 PNDEYFATASYDKLGKVWQTDSGE-TIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKV 546
Query: 487 WDGRIGKFITTLRGHVQAVYMVAW-SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD 545
W TL GH +V V + + + L+S AD +K+W+ K +I + L H
Sbjct: 547 WSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQ 606
Query: 546 EVYAVDWAPDGEKVASGGKDKVLRLW 571
++A+D DGE + D L W
Sbjct: 607 RIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 147 (56.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 55/266 (20%), Positives = 110/266 (41%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFW----DVTTQTPLFKCEGTPYLFYVNETEIT 163
GH + + +V S +G+ +A+ S D R W ++ P + +G + + ++
Sbjct: 379 GHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQG--HAGAITAISLS 436
Query: 164 KTLADVLPLDTLNTEEVVD---IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
K+ + L T +T+ + I ++ + TR H + + S+ SPN
Sbjct: 437 KSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTR-----RAHDKDINSIDVSPNDE 491
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
A+ S D + W + + +GHK + I + K +V+G + I W S
Sbjct: 492 YFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVW-SLL 550
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR 340
+ + GH + + + F+ H + S G DG I++WD + ++ L +H +
Sbjct: 551 DFSCKKTLEGHTNSVQRVKF--FNREHP--QLLSCGADGLIKLWDYKQGEIIKSLDNHDQ 606
Query: 341 SVTCIRWGGSGLIYS-ASQDRTIKVW 365
+ + G ++ A D + W
Sbjct: 607 RIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 123 (48.4 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 53/226 (23%), Positives = 97/226 (42%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
+PG E + ++ +P+G LA S +R +D+ + + K P Y++ + T +
Sbjct: 56 IPGDGEVITNLTITPDGSYLAMISQSQLLRIFDLNKGS-VIKNFKLPSPVYISSVDSTSS 114
Query: 166 LADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP--NGRSLA 223
L D + T V DI + V T S+ GH + S+ F N +
Sbjct: 115 LFAFGGSDGVIT--VWDI--ENGYV---------THSLKGHGTTICSLTFHGELNSQDWR 161
Query: 224 SGSGDT--TVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
SGDT TV+ WD+ + + + H V + + D +SG ++ V+ +++
Sbjct: 162 LASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNF 221
Query: 282 KQIGQ-PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
K I P+ + I A + + Q F + G + ++IWD+
Sbjct: 222 KTINTFPIN---EQIEAAGFVSLIDDRQY--FYTGGSENVLKIWDI 262
Score = 121 (47.7 bits), Expect = 0.00086, P = 0.00086
Identities = 40/145 (27%), Positives = 68/145 (46%)
Query: 435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF-----SPDGRIIASASFDKSIKLWDG 489
G D + +W+ E + + + GH I + F S D R+ AS ++K+WD
Sbjct: 119 GGSDGVITVWDIENGYVTHS-LKGHGTTICSLTFHGELNSQDWRL-ASGDTMGTVKIWDL 176
Query: 490 RIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYA 549
+ I TL+ H AV V + D L +SG D+ + ++N K K P + +++ A
Sbjct: 177 VKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPIN-EQIEA 235
Query: 550 ---VDWAPDGEKVASGGKDKVLRLW 571
V D + +GG + VL++W
Sbjct: 236 AGFVSLIDDRQYFYTGGSENVLKIW 260
Score = 120 (47.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 64/303 (21%), Positives = 116/303 (38%)
Query: 205 GHAEAVISVKF-SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ 263
G+ + +K+ P LA + +R D+ L EGH + + S D K
Sbjct: 336 GNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKW 395
Query: 264 LVSGCKNGVIHAWDSSTGKQIGQPM---RGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
+ + K+ W + Q +P +GH ITA+S ++ + + D
Sbjct: 396 IATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQ--NEPKFLVTGSTDLT 453
Query: 321 IRIWDVILSQCVRVLTS------HTRSVTCIRWGGSGLIYS-ASQDRTIKVWRASDGVMC 373
I+ W + + V TS H + + I + ++ AS D+ KVW+ G
Sbjct: 454 IKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETI 513
Query: 374 RTLEGHAH--W-VNTLALSTDYLMRVEATSTGGFK------YDPANPEESSKHALAKYQA 424
L+GH W +N D L+ V + K + E +++ + +
Sbjct: 514 GVLKGHKRGLWDINFYKF--DKLI-VTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKF 570
Query: 425 QCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI 484
E +L+S D + LW+ K+ + + + H Q I ++ DG +A D +
Sbjct: 571 FNREHPQLLSCGADGLIKLWD-YKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKL 629
Query: 485 KLW 487
W
Sbjct: 630 SFW 632
Score = 119 (46.9 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 53/216 (24%), Positives = 91/216 (42%)
Query: 338 HTRSVTCIRWGGSG----LIYSASQDRTIKVWRASD--GVMCRTLE----GHAHWVNTLA 387
H ++T I S + + S D TIK W+ + + +T E H +N++
Sbjct: 426 HAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSID 485
Query: 388 LST--DYLMRVEATSTGG-FKYDPANPEESSK-HALAKYQAQCPEGEKL-VSGSDDFTLF 442
+S +Y G ++ D K H + + +KL V+GS D T+
Sbjct: 486 VSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIK 545
Query: 443 LWN--PEKEKKSLARMTGHQQLINCVEF-SPDGRIIASASFDKSIKLWDGRIGKFITTLR 499
+W+ KK+L GH + V+F + + + S D IKLWD + G+ I +L
Sbjct: 546 VWSLLDFSCKKTLE---GHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLD 602
Query: 500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
H Q ++ + +D + AD L W T++
Sbjct: 603 NHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEE 638
Score = 83 (34.3 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 36/165 (21%), Positives = 59/165 (35%)
Query: 126 ASGSGDTTVRFWDVTTQ--TPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183
A G D + WD+ T K GT E+ + DT+ T ++ D+
Sbjct: 117 AFGGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDL 176
Query: 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL- 242
V + RC ++ H AV V F +G SG D V ++ +
Sbjct: 177 VKR-----------RCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTIN 225
Query: 243 -FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ 286
F ++ D + +G V+ WD +G+ IG+
Sbjct: 226 TFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDIKSGEMIGR 270
Score = 76 (31.8 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 41/192 (21%), Positives = 71/192 (36%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
G A IS NG L + + V ++ T ++K G + + +PD L
Sbjct: 19 GGTSASISTS---NGELLLATPLNEDVIITNLDTNEIIYKIPGDGEVITNLTITPDGSYL 75
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
++ ++ +D + G I +I+++ + FA G DG I +W
Sbjct: 76 AMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSV-------DSTSSLFAFGGSDGVITVW 128
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGG---SGLIYSASQDR--TIKVWRASDGVMCRTLEGH 379
D+ L H ++ + + G S AS D T+K+W TL+ H
Sbjct: 129 DIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDH 188
Query: 380 AHWVNTLALSTD 391
V + D
Sbjct: 189 NTAVRGVGFDQD 200
Score = 65 (27.9 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 32/140 (22%), Positives = 61/140 (43%)
Query: 8 ITTKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITK 67
+ T I+ + D GEV + +L + + +L++I S L + +F +N+ + K
Sbjct: 47 LDTNEIIYKIPGD-GEV---ITNLTITPDGSYLAMISQSQLLR------IFDLNKGSVIK 96
Query: 68 T--LADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTR--CTSSMPGHAEAVISVKFSP--N 121
L + + ++++ + V V + T S+ GH + S+ F N
Sbjct: 97 NFKLPSPVYISSVDSTSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELN 156
Query: 122 GRSLASGSGDT--TVRFWDV 139
+ SGDT TV+ WD+
Sbjct: 157 SQDWRLASGDTMGTVKIWDL 176
Score = 52 (23.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 19/59 (32%), Positives = 25/59 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNE 159
RC ++ H AV V F +G SG D V ++ T FK T F +NE
Sbjct: 180 RCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYN----TKNFKTINT---FPINE 231
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 290 (107.1 bits), Expect = 6.2e-23, P = 6.2e-23
Identities = 85/284 (29%), Positives = 134/284 (47%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH A+ S+ SPNG+ LA+ S DT + W+ FK Y YV ++ T
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWN-------FKPHARAYR-YVGHKDVV-TSV 66
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT-SSMPGHAEAVISVKFSPNGRSLASGS 226
P L D + V P R S H V SV FS +G+ LA+ S
Sbjct: 67 QFSPHGNLLASASRD-----RTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATAS 121
Query: 227 GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ 286
D +++ W + Q L+ H HWV C +SPD + +VS ++ I WD+ T KQ
Sbjct: 122 EDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT-TNKQC-- 178
Query: 287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ + ++ F+ + C AS+G D +++WDV +++ ++ H+ V CI
Sbjct: 179 -VNNFSDSVGFANFVDFNPSGTC--IASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCIS 235
Query: 347 WGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
+ SG + +AS D T+K+ +G + TL+GH V T++ S
Sbjct: 236 FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 279
Score = 289 (106.8 bits), Expect = 8.2e-23, P = 8.2e-23
Identities = 81/300 (27%), Positives = 137/300 (45%)
Query: 238 TQTPLFK--CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWI 295
T+ P+ + +GHK + + SP+ KQL + + + W+ + + + GHK +
Sbjct: 5 TEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-GHKDVV 63
Query: 296 TALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIY 354
T++ + P H N AS+ +D +R+W +HT V + + G +
Sbjct: 64 TSVQFSP-HGN----LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLA 118
Query: 355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE- 412
+AS+D++IKVW +L H HWV S D + V + K +D N +
Sbjct: 119 TASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 413 ---ESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFS 469
S A + P G + S D T+ +W+ + K L H +NC+ F
Sbjct: 179 VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV-RVNKLLQHYQVHSGGVNCISFH 237
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
P G + +AS D ++K+ D G+ I TL+GH V+ V++S L SG AD+ + +W
Sbjct: 238 PSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 276 (102.2 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 76/291 (26%), Positives = 137/291 (47%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
+GHK IT+L P ++ A++ D + +W+ H VT +++
Sbjct: 15 KGHKAAITSLDLSP-----NGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
G L+ SAS+DRT+++W + H V ++ S D A+ K
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 408 PANPEESSKHALAKYQ--AQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
+ ++L ++ +C P+G +VS S+D T+ +W+ K+ + +
Sbjct: 130 SMY-RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN-KQCVNNFSDSVG 187
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
N V+F+P G IASA D+++K+WD R+ K + + H V +++ L++ S
Sbjct: 188 FANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITAS 247
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
+D TLK+ ++ ++ L GH V+ V ++ GE ASGG D + LW+
Sbjct: 248 SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 298
Score = 161 (61.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 43/146 (29%), Positives = 67/146 (45%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P G + S D T+ +W+ + K L H +NC+ F P G + +AS D ++K+
Sbjct: 196 PSGTCIASAGSDQTVKVWDV-RVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKI 254
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK-------------T 533
D G+ I TL+GH V+ V++S L SG AD+ + +W
Sbjct: 255 LDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNL 314
Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKV 559
K++ D P H ++Y P EKV
Sbjct: 315 KRLHFDSPPHLLDIYPRTPHPHEEKV 340
Score = 140 (54.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 49/188 (26%), Positives = 79/188 (42%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
S H V SV FS +G+ LA+ S D +++ W + Q L+ + +V + +
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR--HTHWVRCAKFS 153
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
++ T ++ D KQ V S G A V F+P+G +A
Sbjct: 154 PDGRLIVSCSEDKTIKIWDTT-NKQCVNNF-------SDSVGFANFV---DFNPSGTCIA 202
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S D TV+ WDV L + H V CI++ P L++ +G + D G+
Sbjct: 203 SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRL 262
Query: 284 IGQPMRGH 291
I ++GH
Sbjct: 263 I-YTLQGH 269
Score = 127 (49.8 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 43/172 (25%), Positives = 71/172 (41%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S+ H V KFSP+GR + S S D T++ WD T + +C +++
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK----QCVNN-----FSDSVGFA 189
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
D P T D Q V+ VR V + H+ V + F P+G L +
Sbjct: 190 NFVDFNPSGTCIASAGSD---QTVKVWDVR-VNKLLQHYQVHSGGVNCISFHPSGNYLIT 245
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
S D T++ D+ ++ +GH V +++S + SG + + W
Sbjct: 246 ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 289 (106.8 bits), Expect = 8.0e-23, P = 8.0e-23
Identities = 81/289 (28%), Positives = 135/289 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S GH A+ S FSPN + +A+ S DT + W + ++ YV ++
Sbjct: 13 SFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYR--------YVGHKDVVT 64
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
+L P L D + V +S H V SV FS +G+ L +
Sbjct: 65 SL-QFSPQGNLLASASRD----RTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVT 119
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
S D +++ W + Q L+ H HWV C +SPD + +VS ++ I WD+ T KQ
Sbjct: 120 ASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT-TNKQC 178
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
+ + ++ F+ N C AS+G D A++IWD+ +++ ++ H+ V C
Sbjct: 179 ---VNNFSDSVGFANFVDFNPNGTC--IASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNC 233
Query: 345 IRWG--GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+ + G+ L+ +AS D T+K+ +G + TL+GH V T++ S D
Sbjct: 234 LSFHPLGNSLV-TASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKD 281
Score = 279 (103.3 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 76/291 (26%), Positives = 141/291 (48%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
+GHK IT+ + P C++ A++ D + +W + H VT +++
Sbjct: 15 KGHKAAITSADFSP-----NCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFS 69
Query: 349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
G L+ SAS+DRT+++W + H V ++ S D + V A+ K
Sbjct: 70 PQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVW 129
Query: 408 PANPEESSKHALAKYQ--AQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
+ ++L ++ +C P+G +VS S+D T+ +W+ K+ + +
Sbjct: 130 SMF-RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN-KQCVNNFSDSVG 187
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
N V+F+P+G IASA D ++K+WD R+ K + + H V +++ LV+ S
Sbjct: 188 FANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTAS 247
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
+D T+K+ ++ ++ L GH V+ V ++ DGE + SGG D + +W+
Sbjct: 248 SDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWR 298
Score = 230 (86.0 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 52/167 (31%), Positives = 89/167 (53%)
Query: 407 DPANPEESSKHALAKYQAQ-CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINC 465
DP H A A P +++ + S D L LW+ + ++ R GH+ ++
Sbjct: 7 DPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAY-RYVGHKDVVTS 65
Query: 466 VEFSPDGRIIASASFDKSIKLWD-GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524
++FSP G ++ASAS D++++LW R GK + + H V V +S+D +LLV+ S D
Sbjct: 66 LQFSPQGNLLASASRDRTVRLWVLDRKGKS-SEFKAHTAPVRSVDFSADGQLLVTASEDK 124
Query: 525 TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++KVW+M ++ L H V ++PDG + S +DK +++W
Sbjct: 125 SIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Score = 132 (51.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 44/172 (25%), Positives = 74/172 (43%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S+ H V KFSP+GR + S S D T++ WD T + +C F +++
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK----QCVNN---F--SDSVGFA 189
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
D P T D + ++ +R + + H+ V + F P G SL +
Sbjct: 190 NFVDFNPNGTCIASAGSDHAVK---IWDIR-MNKLLQHYQVHSCGVNCLSFHPLGNSLVT 245
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
S D TV+ D+ ++ +GH V +++S D + L SG + + W
Sbjct: 246 ASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 131 (51.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 47/189 (24%), Positives = 78/189 (41%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
+S H V SV FS +G+ L + S D +++ W + Q L+ + +V +
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYR--HTHWVRCAKF 152
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL 222
+ ++ T ++ D KQ V S G A V F+PNG +
Sbjct: 153 SPDGRLIVSCSEDKTIKIWDTT-NKQCVNNF-------SDSVGFANFV---DFNPNGTCI 201
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
AS D V+ WD+ L + H V C+++ P LV+ +G + D G+
Sbjct: 202 ASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGR 261
Query: 283 QIGQPMRGH 291
I ++GH
Sbjct: 262 LI-YTLQGH 269
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 271 (100.5 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 69/263 (26%), Positives = 127/263 (48%)
Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
D + +W + T H +VTC+ + SG L+ S S+D+T+++W +
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY--QAQC----PEGE 430
H V ++ +D V A+ K A + +L+++ +C P+G
Sbjct: 62 RAHTATVRSVHFCSDGQSFVTASDDKTVKVW-ATHRQKFLFSLSQHINWVRCAKFSPDGR 120
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
+VS SDD T+ LW+ + ++ + H + V+F P G IA+A D ++K+WD R
Sbjct: 121 LIVSASDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
+ + + H AV +++ L++ S+DSTLK+ ++ ++ L GH V
Sbjct: 180 THRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTV 239
Query: 551 DWAPDGEKVASGGKDKVLRLWQN 573
++ GE ASGG D+ + +W++
Sbjct: 240 AFSRTGEYFASGGSDEQVMVWKS 262
Score = 229 (85.7 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 55/185 (29%), Positives = 91/185 (49%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H V SV F +G+S + S D TV+ W Q LF H +WV C +SPD + +V
Sbjct: 64 HTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIV 123
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
S + + WD S+ + + H ++T + FH + C A++G D +++WD
Sbjct: 124 SASDDKTVKLWDKSSRECVHSYCE-HGGFVTYVD---FHPSGTC--IAAAGMDNTVKVWD 177
Query: 326 VILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
V + ++ H+ +V + + SG + +AS D T+K+ +G + TL GH
Sbjct: 178 VRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPAT 237
Query: 385 TLALS 389
T+A S
Sbjct: 238 TVAFS 242
Score = 215 (80.7 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 61/217 (28%), Positives = 100/217 (46%)
Query: 190 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFW--DVTTQTPLFKCEG 247
V+ ++P +R GH +AV V FSP+G LASGS D TVR W +V ++ +F+
Sbjct: 7 VWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRA-- 63
Query: 248 HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNH 307
H V + + D + V+ + + W + K + + H W+ + P
Sbjct: 64 HTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFS-LSQHINWVRCAKFSP----- 117
Query: 308 QCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWR 366
R S+ D +++WD +CV H VT + + SG I +A D T+KVW
Sbjct: 118 DGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 177
Query: 367 ASDGVMCRTLEGHAHWVNTLAL--STDYLMRVEATST 401
+ + + H+ VN L+ S +YL+ + ST
Sbjct: 178 VRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDST 214
Score = 194 (73.4 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 62/266 (23%), Positives = 105/266 (39%)
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
D+ + W + Q+ ++ GHK V C+ +SP L SG ++ + W + K
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV-KGESTV 60
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
R H + ++ H + F ++ D +++W + + L+ H V C ++
Sbjct: 61 FRAHTATVRSV-----HFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKF 115
Query: 348 GGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKY 406
G LI SAS D+T+K+W S + H +V + A K
Sbjct: 116 SPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKV 175
Query: 407 DPANPEESSKH-----ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
+H A + P G L++ S D TL + + E + L + GHQ
Sbjct: 176 WDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL-MEGRLLYTLHGHQG 234
Query: 462 LINCVEFSPDGRIIASASFDKSIKLW 487
V FS G AS D+ + +W
Sbjct: 235 PATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 192 (72.6 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 59/213 (27%), Positives = 97/213 (45%)
Query: 93 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTP 152
V+ ++P +R GH +AV V FSP+G LASGS D TVR W P K E T
Sbjct: 7 VWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-----VPNVKGESTV 60
Query: 153 YLFYVNETEITKTLADVLPLDTLNTEEVVDI--VYQKQAVFQVRPVTRCTSSMPGHAEAV 210
+ + +D T + ++ V + ++++ +F S+ H V
Sbjct: 61 FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLF----------SLSQHINWV 110
Query: 211 ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-CEGHKHWVLCIAWSPDSKQLVSGCK 269
KFSP+GR + S S D TV+ WD +++ + CE H +V + + P + +
Sbjct: 111 RCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCE-HGGFVTYVDFHPSGTCIAAAGM 169
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
+ + WD T + + Q + H + LS+ P
Sbjct: 170 DNTVKVWDVRTHRLL-QHYQLHSAAVNGLSFHP 201
Score = 153 (58.9 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 52/216 (24%), Positives = 88/216 (40%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H V SV F +G+S + S D TV+ W Q LF ++N K D
Sbjct: 64 HTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ-----HINWVRCAKFSPD 118
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
+ + + ++ V + + K + C S H V V F P+G +A+ D
Sbjct: 119 GRLIVSASDDKTVKL-WDKSS-------RECVHSYCEHGGFVTYVDFHPSGTCIAAAGMD 170
Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
TV+ WDV T L + H V +++ P L++ + + D G+ + +
Sbjct: 171 NTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLL-YTL 229
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
GH+ T +++ + FAS G D + +W
Sbjct: 230 HGHQGPATTVAF-----SRTGEYFASGGSDEQVMVW 260
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 47/176 (26%), Positives = 81/176 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-CEGTPYLFYVNETEIT 163
S+ H V KFSP+GR + S S D TV+ WD +++ + CE ++ YV + +
Sbjct: 102 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYV-DFHPS 160
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
T +D NT +V D+ + + Q + H+ AV + F P+G L
Sbjct: 161 GTCIAAAGMD--NTVKVWDV--RTHRLLQHYQL---------HSAAVNGLSFHPSGNYLI 207
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ S D+T++ D+ L+ GH+ +A+S + SG + + W S+
Sbjct: 208 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 263
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 294 (108.6 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 112/490 (22%), Positives = 206/490 (42%)
Query: 100 TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-----PLFKCEGTPYL 154
++C + + GH AV S+ F+ +G +L S D W++ T+ P+++ L
Sbjct: 186 SKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTIPIYESVEAAVL 245
Query: 155 FY----VNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAV 210
++ + K L + +V ++ Q P S ++
Sbjct: 246 LPEQGDFSQLGVKKQGLHFLTAGSKGVLKVWEVATAACVYSQPVPFEPVESEEEASEHSL 305
Query: 211 ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW-SPDSKQLVSGCK 269
P + + S + + F+D T + G+ VL + + P +V
Sbjct: 306 THCMLVPERNEIVTVSVEHNIVFYDAQTLQLRKQLAGYNDEVLDVKFLGPGDSHIVVATN 365
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS 329
+ + ++ ST Q + GH + I AL + F F S KD +IR+W +
Sbjct: 366 SPQLKVFELSTSHC--QILYGHTETILAL--DVFRKGLM---FVSCAKDKSIRVWRMNKD 418
Query: 330 Q---CVRVLTSHTR---SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
CV H +V+C R S + ++SQD TIKVW + + +
Sbjct: 419 GRVVCVAQGLGHAHGVGAVSCSRLKES-FVVTSSQDCTIKVWNIPESLTSKA-------- 469
Query: 384 NTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL 443
+S + + T G +D ++ + A++ P + + +GS D L
Sbjct: 470 KAALISGPETLHAQMTERG---HD----KDINSVAVS------PNDKLIATGSQDRLAKL 516
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ + L TGH++ I CV+FSP +I+A++S D ++KLW + + T GH
Sbjct: 517 WSCP-DCSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDA 575
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+V + + S L+SG +D LK+W +KT + + L GH D+++ + + V +
Sbjct: 576 SVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTAS 635
Query: 564 KDKVLRLWQN 573
D + LW++
Sbjct: 636 SDSSITLWKD 645
Score = 175 (66.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 44/148 (29%), Positives = 74/148 (50%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+ E LV+GS L WN + + H + + F ++A+ D +IK+
Sbjct: 77 PDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKI 136
Query: 487 WDGRIGKFIT-TLRGHVQAVYMVAWSSD-SRL-LVSGSADSTLKVWNMKTKKIEQDLPGH 543
WD I ++ T L+G V++V + D SRL L S S D +++W++ + K L GH
Sbjct: 137 WD-MIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGH 195
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLW 571
V ++ + DG + S G+DK+ +W
Sbjct: 196 FSAVTSLAFTADGNTLISSGRDKICMVW 223
Score = 165 (63.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 36/112 (32%), Positives = 62/112 (55%)
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD-GRI-IASASFDKSIKLWDG 489
L +G D T+ +W+ K+ + + G +++ VEF PD R+ + S+S D I++WD
Sbjct: 125 LATGGCDSTIKIWDMIKQYCT-HNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDL 183
Query: 490 RIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP 541
K + L GH AV +A+++D L+S D VWN+KT++ + +P
Sbjct: 184 NSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTIP 235
Score = 155 (59.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 59/232 (25%), Positives = 99/232 (42%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRS-LASGSGDTTVRFWDV----TTQTPLFKCEGTPYLFY 156
C + GHA V +V S S + + S D T++ W++ T++ G P +
Sbjct: 423 CVAQGLGHAHGVGAVSCSRLKESFVVTSSQDCTIKVWNIPESLTSKAKAALISG-PETLH 481
Query: 157 VNETEITKTLADVLPLDTLNTEEVVDIVYQKQ-AVFQVRPVTRCTSSMPGHAEAVISVKF 215
TE D+ + ++++ Q + A P GH + V+F
Sbjct: 482 AQMTERGHD-KDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQF 540
Query: 216 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA 275
SP + LA+ S D T++ W + + L EGH VL I + QL+SG +G++
Sbjct: 541 SPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKL 600
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW-DV 326
W T + + + + GH+ I L H N Q ++ D +I +W DV
Sbjct: 601 WTIKTNECV-KTLDGHEDKIWGL-----HTNKQDDMVVTASSDSSITLWKDV 646
Score = 144 (55.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 460 QQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG-HVQAVYMVAWSSDSRLLV 518
Q+ I SPD ++ + S +K W+ R + + T + H+ V + + S S LL
Sbjct: 67 QEDITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLA 126
Query: 519 SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVA--SGGKDKVLRLW 571
+G DST+K+W+M + +L G V+ V++ PD ++ S D +R+W
Sbjct: 127 TGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIW 181
Score = 128 (50.1 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 35/141 (24%), Positives = 65/141 (46%)
Query: 199 CTSSMPGHAEAVISVKFSPN-GR-SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIA 256
CT ++ G + V V+F P+ R L S S D +R WD+ + + +GH V +A
Sbjct: 144 CTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLA 203
Query: 257 WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ-PMRGHKQWITAL----SWEPFHLNHQCRR 311
++ D L+S ++ + W+ T + I P+ + L + + Q
Sbjct: 204 FTADGNTLISSGRDKICMVWNLKTRESIRTIPIYESVEAAVLLPEQGDFSQLGVKKQGLH 263
Query: 312 FASSGKDGAIRIWDVILSQCV 332
F ++G G +++W+V + CV
Sbjct: 264 FLTAGSKGVLKVWEVATAACV 284
Score = 119 (46.9 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P + L + S D TL LW + + L GH + + F G + S D +KL
Sbjct: 542 PVDQILATSSADGTLKLWGLQ-DFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKL 600
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD 539
W + + + TL GH ++ + + ++V+ S+DS++ +W T+ IEQ+
Sbjct: 601 WTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLWKDVTE-IEQE 652
Score = 118 (46.6 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 42/171 (24%), Positives = 71/171 (41%)
Query: 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-HKHWVLCIAWSPDSKQLVS 266
E + S SP+ L +GS ++ W+ + + H V + + S L +
Sbjct: 68 EDITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLAT 127
Query: 267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
G + I WD + ++G + + FH + + SS D IRIWD+
Sbjct: 128 GGCDSTIKIWDMIK-QYCTHNLKGSSGVVHLVE---FHPDISRLQLFSSSMDYKIRIWDL 183
Query: 327 ILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
S+CV VL H +VT + + G + S+ +D+ VW RT+
Sbjct: 184 NSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTI 234
Score = 117 (46.2 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 35/141 (24%), Positives = 63/141 (44%)
Query: 198 RCTSSMPG-HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIA 256
RC + H V ++ F LA+G D+T++ WD+ Q +G V +
Sbjct: 100 RCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVE 159
Query: 257 WSPD-SK-QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
+ PD S+ QL S + I WD ++ K + + GH +T+L++ S
Sbjct: 160 FHPDISRLQLFSSSMDYKIRIWDLNSSKCVAV-LDGHFSAVTSLAFTA-----DGNTLIS 213
Query: 315 SGKDGAIRIWDVILSQCVRVL 335
SG+D +W++ + +R +
Sbjct: 214 SGRDKICMVWNLKTRESIRTI 234
Score = 115 (45.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 45/183 (24%), Positives = 78/183 (42%)
Query: 213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE-GHKHWVLCIAWSPDSKQLVSGCKNG 271
V+ S +G+ + G T + DV T L E + + SPD + LV+G +
Sbjct: 31 VQVSRDGKFMFCPCG-TKLNVIDVETGALLHSLEQDDQEDITSFVLSPDDEVLVTGSRAL 89
Query: 272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC 331
++ W+ + + H I ++ F + A+ G D I+IWD+I C
Sbjct: 90 LLKQWNWRENRCVRTWKAVH---IAPVATMVF--DSTSTLLATGGCDSTIKIWDMIKQYC 144
Query: 332 VRVLTSHTRSVTCIRWGG--SGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
L + V + + S L ++S+S D I++W + L+GH V +LA
Sbjct: 145 THNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAF 204
Query: 389 STD 391
+ D
Sbjct: 205 TAD 207
Score = 106 (42.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 33/140 (23%), Positives = 64/140 (45%)
Query: 101 RCTSSMPG-HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNE 159
RC + H V ++ F LA+G D+T++ WD+ Q +G+ + ++ E
Sbjct: 100 RCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVE 159
Query: 160 TEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNG 219
D+ L ++ +D Y K ++ + ++C + + GH AV S+ F+ +G
Sbjct: 160 FH-----PDISRLQLFSSS--MD--Y-KIRIWDLNS-SKCVAVLDGHFSAVTSLAFTADG 208
Query: 220 RSLASGSGDTTVRFWDVTTQ 239
+L S D W++ T+
Sbjct: 209 NTLISSGRDKICMVWNLKTR 228
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 297 (109.6 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 121/494 (24%), Positives = 219/494 (44%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H + V+ FS + R +A+ S D V+ W+ T + + + VN T +
Sbjct: 664 HEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYD--EHSEQVNCCHFTNN-SH 720
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
L L T +++ + + Q C ++M GH +V +FSP+ + LAS S D
Sbjct: 721 YLLLATASSDCFLKLWDLNQK--------ECRNTMFGHTNSVNHCRFSPDDKLLASCSAD 772
Query: 229 TTVRFWDVTT----------QTPLFKCEGHKHW---VLCIAWSPDSKQLVSGCKNGVIHA 275
T++ WDV + Q L E + V C +WS D +++ KN +
Sbjct: 773 GTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIF-L 831
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
+D TG + + GH I + P NH S + +W+ + C++V
Sbjct: 832 FDIHTGGLLAEIHTGHHSTIQYCDFSP--QNHLAVVALSQC---CVELWN--MDSCLKVA 884
Query: 336 T--SHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVMCRT----LEGHAHWV----N 384
H V C+ + G + ++S D+TI++W +C+ L+ V
Sbjct: 885 DCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKK--VCKNSAIVLKQEIDVVFQENE 942
Query: 385 TLALSTDYLMRVEATS--TGGFKYDPANPEESSKHALAKYQAQC----PEGEKLVSGSDD 438
+ L+ D + R++ + TG Y L + Q C P + + G +D
Sbjct: 943 VMVLAVDNIKRLQLINGKTGQIDY------------LIEAQVSCCCLSPHLQYIAFGGED 990
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL 498
+ + + +R+ GH++ + ++F+ DG+ + S+S D SI++W+ + +++ L
Sbjct: 991 GAVEILELLNNRIFQSRI-GHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVF-L 1048
Query: 499 RGHVQAVYMVAWSSDSRLLVSGSADSTLK-VWNMKTKKIEQDLPGHGDEVYAVDWAPDGE 557
+ H + V +S+LL S S D T+K +W++ T +IE+D H D V + D +PD
Sbjct: 1049 QAHQETVKDFKLLKNSKLL-SWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDAT 1107
Query: 558 KVASGGKDKVLRLW 571
K +S DK ++W
Sbjct: 1108 KFSSTSADKTAKIW 1121
Score = 262 (97.3 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 108/490 (22%), Positives = 196/490 (40%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C ++M GH +V +FSP+ + LAS S D T++ WDV + K F++N E
Sbjct: 743 CRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANER-KSINVKQ-FFLNSEE 800
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVF--QVRPVTRCTSSMPGHAEAVISVKFSPNG 219
+ + ++ + + + +V K +F + GH + FSP
Sbjct: 801 PQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQN 860
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
V W++ + + C GH WV C+ +SPD ++ + I W+
Sbjct: 861 HLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWE-- 918
Query: 280 TGKQIGQPMRGHKQWITALSWEP----FHLNHQCRRFASSGKDGAIR-IWDVILSQCVRV 334
T K KQ I + E +++ R +GK G I + + +S C
Sbjct: 919 TKKVCKNSAIVLKQEIDVVFQENEVMVLAVDNIKRLQLINGKTGQIDYLIEAQVSCCC-- 976
Query: 335 LTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLM 394
L+ H + + +GG +D +++ + + ++ GH V + + D
Sbjct: 977 LSPHLQYIA---FGG--------EDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKT 1025
Query: 395 RVEATSTGGFKYDPANPEES---SKHALAKYQAQCPEGEKLVSGSDDFTLF-LWNPEKEK 450
+ ++ + EE H + + KL+S S D T+ +W+ +
Sbjct: 1026 LISSSDDSSIQVWNWQSEEYVFLQAHQETVKDFKLLKNSKLLSWSFDGTVKKIWSIITGR 1085
Query: 451 KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW 510
HQ + + SPD +S S DK+ K+W + + LRGH V +
Sbjct: 1086 IE-KDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVF 1144
Query: 511 SSDSRLLVSGSADSTLKVWNMKTKK---------IEQDLPGHGDEVYAVDWAPDGEKVAS 561
S DS LL +G + +++WN+ + +E+ HG V + ++PD + + S
Sbjct: 1145 SVDSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVS 1204
Query: 562 GGKDKVLRLW 571
G L+ W
Sbjct: 1205 AGG--YLKWW 1212
Score = 229 (85.7 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 90/392 (22%), Positives = 168/392 (42%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H +AV FS +G+ +AS D T++ + T L + + H+ VLC A+S D + +
Sbjct: 622 HTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIA 681
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ + + W+S TG + H + + F N A++ D +++WD
Sbjct: 682 TCSVDKKVKIWNSMTGGLV-HVYDEHSEQVNCCH---FTNNSHYLLLATASSDCFLKLWD 737
Query: 326 VILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
+ +C + HT SV R+ L+ S S D T+K+W +++ ++N
Sbjct: 738 LNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLN 797
Query: 385 TLALSTDYLMRVEATSTGG-------------FKYDPAN----PE-ESSKHALAKYQAQC 426
+ D + V+ S F +D E + H+ +Y
Sbjct: 798 SEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCDFS 857
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+ V + LWN + K +A GH ++CV FSPDG ++S D++I+L
Sbjct: 858 PQNHLAVVALSQCCVELWNMDSCLK-VADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRL 916
Query: 487 WDGR-IGK-FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG 544
W+ + + K L+ + V+ + ++++ L++ N KT +I+ +
Sbjct: 917 WETKKVCKNSAIVLKQEIDVVFQ----ENEVMVLAVDNIKRLQLINGKTGQIDYLIEA-- 970
Query: 545 DEVYAVDWAPDGEKVASGGKD---KVLRLWQN 573
+V +P + +A GG+D ++L L N
Sbjct: 971 -QVSCCCLSPHLQYIAFGGEDGAVEILELLNN 1001
Score = 186 (70.5 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 65/255 (25%), Positives = 113/255 (44%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R S GH + V ++F+ +G++L S S D++++ W+ ++ Y+F
Sbjct: 1002 RIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEE---------YVFLQAHQ 1052
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFSPNG 219
E K + L+ D +K ++ + +T R H + V+S SP+
Sbjct: 1053 ETVKDFKLLKNSKLLSWS--FDGTVKK--IWSI--ITGRIEKDFVCHQDTVLSCDISPDA 1106
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+S S D T + W +PL + GHK V C +S DS L +G NG I W+ S
Sbjct: 1107 TKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVS 1166
Query: 280 TGK--QIGQPM---RG---HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC 331
G+ + P+ G H W+T L + P + S+G G ++ W+V+ +
Sbjct: 1167 NGELLHLCAPILVEEGAATHGGWVTDLCFSP-----DSKMLVSAG--GYLKWWNVVTGES 1219
Query: 332 VRVLTSHTRSVTCIR 346
+ T +T TC++
Sbjct: 1220 SQ--TFYTNG-TCLK 1231
Score = 170 (64.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 85/359 (23%), Positives = 155/359 (43%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH V V FSP+G S + S D T+R W+ T + C K+ + + D +
Sbjct: 888 GHLSWVHCVMFSPDGSSFLTSSDDQTIRLWE-TKKV----C---KNSAIVLKQEID---V 936
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
V ++ A D+ Q+ G ++ L+ + A G+DGA+ I
Sbjct: 937 VFQENEVMVLAVDNIKRLQLINGKTGQIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEIL 996
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW--RASDGVMCR----TLE 377
+++ ++ + H ++V I++ G + S+S D +I+VW ++ + V + T++
Sbjct: 997 ELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVFLQAHQETVK 1056
Query: 378 GHAHWVNTLALSTDY---LMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS 434
N+ LS + + ++ + TG + D +++ P+ K S
Sbjct: 1057 DFKLLKNSKLLSWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDIS-----PDATKFSS 1111
Query: 435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF 494
S D T +W+ E L + GH+ + C FS D ++A+ + I++W+ G+
Sbjct: 1112 TSADKTAKIWSFEL-LSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGEL 1170
Query: 495 ------ITTLRG---HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG 544
I G H V + +S DS++LVS A LK WN+ T + Q +G
Sbjct: 1171 LHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVS--AGGYLKWWNVVTGESSQTFYTNG 1227
Score = 156 (60.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 45/166 (27%), Positives = 80/166 (48%)
Query: 411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL-WNPEKEKKSLARMT--GHQQLINCVE 467
PE S + AK QA+ +++ G L+L W +K K+L+R+ H +
Sbjct: 579 PETSEVYQQAKLQAK----QEVDHGM----LYLEWINKKNIKNLSRLVVRPHTDAVYHAC 630
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527
FS DG+ IAS DK+++++ G+ + ++ H V A+S+D R + + S D +K
Sbjct: 631 FSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVK 690
Query: 528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV--ASGGKDKVLRLW 571
+WN T + H ++V + + + A+ D L+LW
Sbjct: 691 IWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLW 736
Score = 48 (22.0 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 12/51 (23%), Positives = 28/51 (54%)
Query: 6 DKITTKRILTRFKSDDGEVAG-DLLDLPLNVNTEHLSLIVNSLLQQDEGTP 55
D + + + +SD G+ G ++L L +N+ L +S++++ +G+P
Sbjct: 275 DSVMGPKYIVAVESDLGKEKGLEILSLFVNMKKADLPEQAHSIIKECKGSP 325
Score = 38 (18.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 323 IWDV-IL----SQCVRVLTSHTRSVT 343
IWD IL +QC +LT+ +SVT
Sbjct: 249 IWDSWILKAFDNQCQILLTTRDKSVT 274
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 206 (77.6 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 47/150 (31%), Positives = 81/150 (54%)
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
A P + L +GS D T LW + + L +GH++ + CV+FSP +++A+AS D +
Sbjct: 486 AVAPNDKLLATGSQDRTAKLWALPR-CQLLGTFSGHRRGLWCVQFSPMDQVLATASADGT 544
Query: 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
IKLW + + T GH +V VA+ S L+S +D LK+W +K + + L H
Sbjct: 545 IKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRTLDAH 604
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
D+V+ + + ++ +G D + LW++
Sbjct: 605 EDKVWGLHCSRLDDRALTGASDSRVVLWKD 634
Score = 185 (70.2 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 69/307 (22%), Positives = 131/307 (42%)
Query: 71 DVLPLDTLNTEEVVDIVYQKQAVFQVRPV-TRCTSSMPGHAEAVISVKFSPNGRSLASGS 129
+VL + L E+ +V +V + T + GH + V+++ GR AS +
Sbjct: 336 EVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSACQILHGHTDIVLALDVFRKGRLFASCA 395
Query: 130 GDTTVRFWDVTTQTPLFKC--EGTPYLFYVNE---TEITKTLADVLPLD-TLNTEEVVDI 183
D ++R W + + C +G+ + V + + +T D T+ + +
Sbjct: 396 KDQSIRVWRMNKSGEV-ACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEA 454
Query: 184 VYQKQAVFQVRPV-TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 242
+ K + PV + ++ H + + SV +PN + LA+GS D T + W + L
Sbjct: 455 LLSKGTGHEGGPVFLQAQATQHCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLL 514
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
GH+ + C+ +SP + L + +G I W + + GH + +++
Sbjct: 515 GTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCL-KTFEGHDASVLKVAFVS 573
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT---CIRWGGSGLIYSASQD 359
+ + SSG DG +++W + ++CVR L +H V C R L AS
Sbjct: 574 -----RGTQLLSSGSDGLLKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRALT-GASDS 627
Query: 360 RTIKVWR 366
R + +W+
Sbjct: 628 RVV-LWK 633
Score = 171 (65.3 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 48/156 (30%), Positives = 80/156 (51%)
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQ------QL----------INCVEFSPDGRII 475
LV+GS D T+ LW P E L++ TGH+ Q IN V +P+ +++
Sbjct: 437 LVTGSQDCTVKLW-PLPEAL-LSKGTGHEGGPVFLQAQATQHCHDKDINSVAVAPNDKLL 494
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
A+ S D++ KLW + + T GH + ++ V +S ++L + SAD T+K+W ++
Sbjct: 495 ATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFS 554
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ GH V V + G ++ S G D +L+LW
Sbjct: 555 CLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLW 590
Score = 171 (65.3 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 91/387 (23%), Positives = 157/387 (40%)
Query: 213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGH-KHWVLCIAWSPDSKQLVSGCKNG 271
V+ G+ L G T V DV + L E + + SPD K LV+ +
Sbjct: 30 VQLDQTGQHLFCVCG-TRVNILDVASGAVLRSLEQEDQEDITAFDLSPDDKVLVTASRAL 88
Query: 272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC 331
++ W G H + ++++P A+ G DGA+R+WDV+ +C
Sbjct: 89 LLAQWAWQEGSVTRLWKAIHTAPVATMAFDP-----TSTLLATGGCDGAVRVWDVV--RC 141
Query: 332 VRVLTSHTRS----VTCIRWGGSG---LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
T H R V + + L++S++ D +I+VW + L H V
Sbjct: 142 YG--THHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVT 199
Query: 385 TLALSTD-YLMRVEATSTGGFKYDPANPE--------ESSKHALAKYQAQCPE------G 429
+L S D + M +D + + ES + A+ + PE G
Sbjct: 200 SLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEPAPELGVKSAG 259
Query: 430 EKLVSGSDDFTLFLWNPEKEK--KSLARMTGH-QQLINCVEFSPDGRIIASASFDKSIKL 486
++ D L +W + + R+ G ++L +C G ++ S + D ++ L
Sbjct: 260 LHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAG-LLLSVTADHNLLL 318
Query: 487 WDGRIGKFITTLRGHVQAVYMVAW-SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD 545
+D R + G+ + V V + + +V S LKV++++T Q L GH D
Sbjct: 319 YDARSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSAC-QILHGHTD 377
Query: 546 EVYAVDWAPDGEKVASGGKDKVLRLWQ 572
V A+D G AS KD+ +R+W+
Sbjct: 378 IVLALDVFRKGRLFASCAKDQSIRVWR 404
Score = 144 (55.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 66/319 (20%), Positives = 127/319 (39%)
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPV-TRCTSSMPGHAEAVISVKFSPNGRSLASGS 226
+VL + L E+ +V +V + T + GH + V+++ GR AS +
Sbjct: 336 EVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSACQILHGHTDIVLALDVFRKGRLFASCA 395
Query: 227 GDTTVRFWDVTTQTPLFKC----EGHKHWVLCIAWSPDSKQ-LVSGCKNGVIHAW---DS 278
D ++R W + + C GH H V I S + LV+G ++ + W ++
Sbjct: 396 KDQSIRVWRMNKSGEV-ACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEA 454
Query: 279 STGKQIGQPMRGHKQWITALSWEPFH---LNHQC-----RRFASSGKDGAIRIWDVILSQ 330
K G G ++ A + + H +N + A+ +D ++W + Q
Sbjct: 455 LLSKGTGH--EGGPVFLQAQATQHCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQ 512
Query: 331 CVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
+ + H R + C+++ ++ +AS D TIK+W D +T EGH V +A
Sbjct: 513 LLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFV 572
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPE-GEKLVSGSDDFTLFLW 444
+ + + S G K E + H + C ++ ++G+ D + LW
Sbjct: 573 SRGTQLLSSGSDGLLKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRALTGASDSRVVLW 632
Query: 445 NPEKEKKSLARMTGHQQLI 463
E + ++ +
Sbjct: 633 KDVTEAEQAEEQAKREEQV 651
Score = 140 (54.3 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 54/231 (23%), Positives = 97/231 (41%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRS-LASGSGDTTVRFWDVTTQTPLFKC---EGTPYLFYV 157
C + GH +V ++ S + L +GS D TV+ W + + L K EG P
Sbjct: 413 CVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLP-EALLSKGTGHEGGPVFLQA 471
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQ-KQAVFQVRPVTRCTSSMPGHAEAVISVKFS 216
T+ D+ + ++++ Q + A P + + GH + V+FS
Sbjct: 472 QATQHCHD-KDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFS 530
Query: 217 PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
P + LA+ S D T++ W + + L EGH VL +A+ QL+S +G++ W
Sbjct: 531 PMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLW 590
Query: 277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW-DV 326
+ + + + H+ + L H + R + D + +W DV
Sbjct: 591 TIKNNECV-RTLDAHEDKVWGL-----HCSRLDDRALTGASDSRVVLWKDV 635
Score = 139 (54.0 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 94/398 (23%), Positives = 159/398 (39%)
Query: 91 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG 150
Q +Q VTR ++ H V ++ F P LA+G D VR WDV +C G
Sbjct: 92 QWAWQEGSVTRLWKAI--HTAPVATMAFDPTSTLLATGGCDGAVRVWDVV------RCYG 143
Query: 151 TPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAV 210
T + F + + P L D + ++ Q R C + + H AV
Sbjct: 144 THH-FRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSL-QERS---CLAVLTAHYSAV 198
Query: 211 ISVKFSPNGRSLASGSGDTTVRFWDV----TTQT-PLFKCEGHKHWVLCIAW-SPD---- 260
S+ FS +G ++ S D WD+ T+T P+F E + VL +P+
Sbjct: 199 TSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVF--ESVEAAVLLPEEPAPELGVK 256
Query: 261 --SKQLVSGCKNGVIHAWDSSTGKQIG--QPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
++ G + W++++G+ + Q +RG + +T + L H S
Sbjct: 257 SAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCT-----LAHAAGLLLSVT 311
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG--SGLIYSASQDRTIKVWRASDGVMCR 374
D + ++D + + ++ V +R+ G + AS +KV+ C+
Sbjct: 312 ADHNLLLYDARSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSA-CQ 370
Query: 375 TLEGHAHWVNTL----------ALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA 424
L GH V L + + D +RV + G + A + S H +
Sbjct: 371 ILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSG---EVACVAQGSGHTHSVGTI 427
Query: 425 QCPEGEK--LVSGSDDFTLFLWNPEKEKKSLARMTGHQ 460
C ++ LV+GS D T+ LW P E L++ TGH+
Sbjct: 428 CCSRLKETFLVTGSQDCTVKLW-PLPEAL-LSKGTGHE 463
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 81/326 (24%), Positives = 131/326 (40%)
Query: 188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG 247
Q +Q VTR ++ H V ++ F P LA+G D VR WDV G
Sbjct: 92 QWAWQEGSVTRLWKAI--HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRG 149
Query: 248 HKHWVLCIAWSPDSKQLV--SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL 305
V +A+ PD +L+ S + I W S + + H +T+L++
Sbjct: 150 SPGVVHLVAFHPDPARLLLFSSAADTSIRVW-SLQERSCLAVLTAHYSAVTSLTFSAD-- 206
Query: 306 NHQCRRFASSGKDGAIRIWDVILSQCVR---VLTSHTRSVTC-------IRWGGSGLIYS 355
H SSG+D IWD+ Q R V S +V + +GL +
Sbjct: 207 GHT---MLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEPAPELGVKSAGLHFL 263
Query: 356 ASQDR-TIKVWRASDGVMC----RTLEGHAHWVN--TLALSTDYLMRVEATSTGGFKYDP 408
+ D+ ++VW A+ G C + L G + TLA + L+ V A YD
Sbjct: 264 TAGDQGALRVWEAASG-RCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTADHNL-LLYD- 320
Query: 409 ANPEESSKHALAKYQAQC-------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
A K A Y + PE +V S+ L +++ + + + GH
Sbjct: 321 ARSLRLRKQ-FAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSACQI--LHGHTD 377
Query: 462 LINCVEFSPDGRIIASASFDKSIKLW 487
++ ++ GR+ AS + D+SI++W
Sbjct: 378 IVLALDVFRKGRLFASCAKDQSIRVW 403
Score = 98 (39.6 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 31/109 (28%), Positives = 51/109 (46%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P + L + S D T+ LW + + L GH + V F G + S+ D +KL
Sbjct: 531 PMDQVLATASADGTIKLWALQ-DFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKL 589
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSS-DSRLLVSGSADSTLKVWNMKTK 534
W + + + TL H V+ + S D R L +G++DS + +W T+
Sbjct: 590 WTIKNNECVRTLDAHEDKVWGLHCSRLDDRAL-TGASDSRVVLWKDVTE 637
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 206 (77.6 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 47/150 (31%), Positives = 81/150 (54%)
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
A P + L +GS D T LW + + L +GH++ + CV+FSP +++A+AS D +
Sbjct: 486 AVAPNDKLLATGSQDRTAKLWALPR-CQLLGTFSGHRRGLWCVQFSPMDQVLATASADGT 544
Query: 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
IKLW + + T GH +V VA+ S L+S +D LK+W +K + + L H
Sbjct: 545 IKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRTLDAH 604
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
D+V+ + + ++ +G D + LW++
Sbjct: 605 EDKVWGLHCSRLDDRALTGASDSRVVLWKD 634
Score = 185 (70.2 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 69/307 (22%), Positives = 131/307 (42%)
Query: 71 DVLPLDTLNTEEVVDIVYQKQAVFQVRPV-TRCTSSMPGHAEAVISVKFSPNGRSLASGS 129
+VL + L E+ +V +V + T + GH + V+++ GR AS +
Sbjct: 336 EVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSACQILHGHTDIVLALDVFRKGRLFASCA 395
Query: 130 GDTTVRFWDVTTQTPLFKC--EGTPYLFYVNE---TEITKTLADVLPLD-TLNTEEVVDI 183
D ++R W + + C +G+ + V + + +T D T+ + +
Sbjct: 396 KDQSIRVWRMNKSGEV-ACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEA 454
Query: 184 VYQKQAVFQVRPV-TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 242
+ K + PV + ++ H + + SV +PN + LA+GS D T + W + L
Sbjct: 455 LLSKGTGHEGGPVFLQAQATQRCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLL 514
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
GH+ + C+ +SP + L + +G I W + + GH + +++
Sbjct: 515 GTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCL-KTFEGHDASVLKVAFVS 573
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT---CIRWGGSGLIYSASQD 359
+ + SSG DG +++W + ++CVR L +H V C R L AS
Sbjct: 574 -----RGTQLLSSGSDGLLKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRALT-GASDS 627
Query: 360 RTIKVWR 366
R + +W+
Sbjct: 628 RVV-LWK 633
Score = 171 (65.3 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 48/156 (30%), Positives = 80/156 (51%)
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQ------QL----------INCVEFSPDGRII 475
LV+GS D T+ LW P E L++ TGH+ Q IN V +P+ +++
Sbjct: 437 LVTGSQDCTVKLW-PLPEAL-LSKGTGHEGGPVFLQAQATQRCHDKDINSVAVAPNDKLL 494
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
A+ S D++ KLW + + T GH + ++ V +S ++L + SAD T+K+W ++
Sbjct: 495 ATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFS 554
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ GH V V + G ++ S G D +L+LW
Sbjct: 555 CLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLW 590
Score = 166 (63.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 90/387 (23%), Positives = 156/387 (40%)
Query: 213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGH-KHWVLCIAWSPDSKQLVSGCKNG 271
V+ G+ L G T V DV + L E + + SPD K LV+ +
Sbjct: 30 VQLDQTGQHLFCVCG-TRVNILDVASGAVLRSLEQEDQEDITAFDLSPDDKVLVTASRAL 88
Query: 272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC 331
++ W G H + ++++P A+ G DGA+R+WDV+ +C
Sbjct: 89 LLAQWAWQEGSVTRLWKAIHTAPVATMAFDP-----TSTLLATGGCDGAVRVWDVV--RC 141
Query: 332 VRVLTSHTRS----VTCIRWGGSG---LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
T H R V + + L++S++ D +I+VW + L H V
Sbjct: 142 YG--THHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVT 199
Query: 385 TLALSTD-YLMRVEATSTGGFKYDPANPE--------ESSKHALAKYQAQCPE------G 429
+L S D + M +D + + ES + A+ + PE G
Sbjct: 200 SLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEPAPELGVKSAG 259
Query: 430 EKLVSGSDDFTLFLWNPEKEK--KSLARMTGH-QQLINCVEFSPDGRIIASASFDKSIKL 486
++ D L +W + + R+ G ++L +C G ++ S + D ++ L
Sbjct: 260 LHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAG-LLLSVTADHNLLL 318
Query: 487 WDGRIGKFITTLRGHVQAVYMVAW-SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD 545
+D + G+ + V V + + +V S LKV++++T Q L GH D
Sbjct: 319 YDAHSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSAC-QILHGHTD 377
Query: 546 EVYAVDWAPDGEKVASGGKDKVLRLWQ 572
V A+D G AS KD+ +R+W+
Sbjct: 378 IVLALDVFRKGRLFASCAKDQSIRVWR 404
Score = 144 (55.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 66/319 (20%), Positives = 127/319 (39%)
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPV-TRCTSSMPGHAEAVISVKFSPNGRSLASGS 226
+VL + L E+ +V +V + T + GH + V+++ GR AS +
Sbjct: 336 EVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSACQILHGHTDIVLALDVFRKGRLFASCA 395
Query: 227 GDTTVRFWDVTTQTPLFKC----EGHKHWVLCIAWSPDSKQ-LVSGCKNGVIHAW---DS 278
D ++R W + + C GH H V I S + LV+G ++ + W ++
Sbjct: 396 KDQSIRVWRMNKSGEV-ACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEA 454
Query: 279 STGKQIGQPMRGHKQWITALSWEPFH---LNHQC-----RRFASSGKDGAIRIWDVILSQ 330
K G G ++ A + + H +N + A+ +D ++W + Q
Sbjct: 455 LLSKGTGH--EGGPVFLQAQATQRCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQ 512
Query: 331 CVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
+ + H R + C+++ ++ +AS D TIK+W D +T EGH V +A
Sbjct: 513 LLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFV 572
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPE-GEKLVSGSDDFTLFLW 444
+ + + S G K E + H + C ++ ++G+ D + LW
Sbjct: 573 SRGTQLLSSGSDGLLKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRALTGASDSRVVLW 632
Query: 445 NPEKEKKSLARMTGHQQLI 463
E + ++ +
Sbjct: 633 KDVTEAEQAEEQAKREEQV 651
Score = 140 (54.3 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 54/231 (23%), Positives = 97/231 (41%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRS-LASGSGDTTVRFWDVTTQTPLFKC---EGTPYLFYV 157
C + GH +V ++ S + L +GS D TV+ W + + L K EG P
Sbjct: 413 CVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLP-EALLSKGTGHEGGPVFLQA 471
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQ-KQAVFQVRPVTRCTSSMPGHAEAVISVKFS 216
T+ D+ + ++++ Q + A P + + GH + V+FS
Sbjct: 472 QATQRCHD-KDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFS 530
Query: 217 PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
P + LA+ S D T++ W + + L EGH VL +A+ QL+S +G++ W
Sbjct: 531 PMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLW 590
Query: 277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW-DV 326
+ + + + H+ + L H + R + D + +W DV
Sbjct: 591 TIKNNECV-RTLDAHEDKVWGL-----HCSRLDDRALTGASDSRVVLWKDV 635
Score = 139 (54.0 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 94/398 (23%), Positives = 159/398 (39%)
Query: 91 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG 150
Q +Q VTR ++ H V ++ F P LA+G D VR WDV +C G
Sbjct: 92 QWAWQEGSVTRLWKAI--HTAPVATMAFDPTSTLLATGGCDGAVRVWDVV------RCYG 143
Query: 151 TPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAV 210
T + F + + P L D + ++ Q R C + + H AV
Sbjct: 144 THH-FRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSL-QERS---CLAVLTAHYSAV 198
Query: 211 ISVKFSPNGRSLASGSGDTTVRFWDV----TTQT-PLFKCEGHKHWVLCIAW-SPD---- 260
S+ FS +G ++ S D WD+ T+T P+F E + VL +P+
Sbjct: 199 TSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVF--ESVEAAVLLPEEPAPELGVK 256
Query: 261 --SKQLVSGCKNGVIHAWDSSTGKQIG--QPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
++ G + W++++G+ + Q +RG + +T + L H S
Sbjct: 257 SAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCT-----LAHAAGLLLSVT 311
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG--SGLIYSASQDRTIKVWRASDGVMCR 374
D + ++D + + ++ V +R+ G + AS +KV+ C+
Sbjct: 312 ADHNLLLYDAHSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSA-CQ 370
Query: 375 TLEGHAHWVNTL----------ALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA 424
L GH V L + + D +RV + G + A + S H +
Sbjct: 371 ILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSG---EVACVAQGSGHTHSVGTI 427
Query: 425 QCPEGEK--LVSGSDDFTLFLWNPEKEKKSLARMTGHQ 460
C ++ LV+GS D T+ LW P E L++ TGH+
Sbjct: 428 CCSRLKETFLVTGSQDCTVKLW-PLPEAL-LSKGTGHE 463
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 81/326 (24%), Positives = 132/326 (40%)
Query: 188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG 247
Q +Q VTR ++ H V ++ F P LA+G D VR WDV G
Sbjct: 92 QWAWQEGSVTRLWKAI--HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRG 149
Query: 248 HKHWVLCIAWSPDSKQLV--SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL 305
V +A+ PD +L+ S + I W S + + H +T+L++
Sbjct: 150 SPGVVHLVAFHPDPARLLLFSSAADTSIRVW-SLQERSCLAVLTAHYSAVTSLTFSAD-- 206
Query: 306 NHQCRRFASSGKDGAIRIWDVILSQCVR---VLTSHTRSVTC-------IRWGGSGLIYS 355
H SSG+D IWD+ Q R V S +V + +GL +
Sbjct: 207 GHT---MLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEPAPELGVKSAGLHFL 263
Query: 356 ASQDR-TIKVWRASDGVMC----RTLEGHAHWVN--TLALSTDYLMRVEATSTGGFKYDP 408
+ D+ ++VW A+ G C + L G + TLA + L+ V A YD
Sbjct: 264 TAGDQGALRVWEAASG-RCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTADHNL-LLYD- 320
Query: 409 ANPEESSKHALAKYQAQC-------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
A+ K A Y + PE +V S+ L +++ + + + GH
Sbjct: 321 AHSLRLRKQ-FAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSACQI--LHGHTD 377
Query: 462 LINCVEFSPDGRIIASASFDKSIKLW 487
++ ++ GR+ AS + D+SI++W
Sbjct: 378 IVLALDVFRKGRLFASCAKDQSIRVW 403
Score = 98 (39.6 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 31/109 (28%), Positives = 51/109 (46%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P + L + S D T+ LW + + L GH + V F G + S+ D +KL
Sbjct: 531 PMDQVLATASADGTIKLWALQ-DFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKL 589
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSS-DSRLLVSGSADSTLKVWNMKTK 534
W + + + TL H V+ + S D R L +G++DS + +W T+
Sbjct: 590 WTIKNNECVRTLDAHEDKVWGLHCSRLDDRAL-TGASDSRVVLWKDVTE 637
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 284 (105.0 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 84/284 (29%), Positives = 133/284 (46%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH A+ S+ SPNG+ LA+ S DT + W+ FK Y YV ++ T
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWN-------FKPHARAYR-YVGHKDVV-TSV 66
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT-SSMPGHAEAVISVKFSPNGRSLASGS 226
P L D + V P R S H V SV FS +G+ LA+ S
Sbjct: 67 QFSPHGNLLASASRD-----RTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATAS 121
Query: 227 GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ 286
D +++ W + Q L+ H HWV C +SPD + +VS ++ I WD+ T KQ
Sbjct: 122 EDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT-TNKQC-- 178
Query: 287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ + ++ F+ + C AS+G D +++WDV +++ ++ H+ V CI
Sbjct: 179 -VNNFSDSVGFANFVDFNPSGTC--IASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCIS 235
Query: 347 WGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
+ S + +AS D T+K+ +G + TL+GH V T++ S
Sbjct: 236 FHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 279
Score = 284 (105.0 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 90/343 (26%), Positives = 151/343 (44%)
Query: 238 TQTPLFK--CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWI 295
T+ P+ + +GHK + + SP+ KQL + + + W+ + + + GHK +
Sbjct: 5 TEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-GHKDVV 63
Query: 296 TALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIY 354
T++ + P H N AS+ +D +R+W +HT V + + G +
Sbjct: 64 TSVQFSP-HGN----LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLA 118
Query: 355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE- 412
+AS+D++IKVW +L H HWV S D + V + K +D N +
Sbjct: 119 TASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 413 ---ESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFS 469
S A + P G + S D T+ +W+ + K L H +NC+ F
Sbjct: 179 VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV-RVNKLLQHYQVHSGGVNCISFH 237
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
P + +AS D ++K+ D G+ I TL+GH V+ V++S L SG AD+ + +W
Sbjct: 238 PSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Query: 530 ------------NMKT-KKIEQDLPGHGDEVYAVDWAPDGEKV 559
N + K++ D P H ++Y P EKV
Sbjct: 298 RTNFDELHCKGLNKRNLKRLHFDSPPHLLDIYPRTPHPHEEKV 340
Score = 277 (102.6 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 77/291 (26%), Positives = 137/291 (47%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
+GHK IT+L P ++ A++ D + +W+ H VT +++
Sbjct: 15 KGHKAAITSLDLSP-----NGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
G L+ SAS+DRT+++W + H V ++ S D A+ K
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 408 PANPEESSKHALAKYQ--AQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
+ ++L ++ +C P+G +VS S+D T+ +W+ K+ + +
Sbjct: 130 SMY-RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN-KQCVNNFSDSVG 187
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
N V+F+P G IASA D+++K+WD R+ K + + H V +++ LV+ S
Sbjct: 188 FANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTAS 247
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
+D TLK+ ++ ++ L GH V+ V ++ GE ASGG D + LW+
Sbjct: 248 SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 298
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 50/188 (26%), Positives = 79/188 (42%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
S H V SV FS +G+ LA+ S D +++ W + Q L+ + +V + +
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR--HTHWVRCAKFS 153
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
++ T ++ D KQ V S G A V F+P+G +A
Sbjct: 154 PDGRLIVSCSEDKTIKIWDTT-NKQCVNNF-------SDSVGFANFV---DFNPSGTCIA 202
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S D TV+ WDV L + H V CI++ P LV+ +G + D G+
Sbjct: 203 SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRL 262
Query: 284 IGQPMRGH 291
I ++GH
Sbjct: 263 I-YTLQGH 269
Score = 121 (47.7 bits), Expect = 0.00039, P = 0.00039
Identities = 42/172 (24%), Positives = 70/172 (40%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S+ H V KFSP+GR + S S D T++ WD T + +C +++
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK----QCVNN-----FSDSVGFA 189
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
D P T D Q V+ VR V + H+ V + F P+ L +
Sbjct: 190 NFVDFNPSGTCIASAGSD---QTVKVWDVR-VNKLLQHYQVHSGGVNCISFHPSDNYLVT 245
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
S D T++ D+ ++ +GH V +++S + SG + + W
Sbjct: 246 ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 276 (102.2 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 91/325 (28%), Positives = 148/325 (45%)
Query: 189 AVFQVRPVTRCTSS------MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 242
A+ Q P RC+S + GH V KF P G +LAS D + W+V
Sbjct: 70 ALLQSGP-PRCSSLQAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDN 128
Query: 243 FKC-EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWE 301
+ +GH V+ + ++ D L S + + WDS TG+++ + ++GH ++ S
Sbjct: 129 YATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--SCY 185
Query: 302 PFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDR 360
P Q + DG +++WD+ V+ +T V + + S I S D
Sbjct: 186 PARRGPQL--VCTGSDDGTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDN 242
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTD--YLMRVEATSTGGFKYD--PANPEE--- 413
IKVW + T+ GHA V L+LS++ YL+ +T +D P P+E
Sbjct: 243 DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRI-WDVRPFAPKERCV 301
Query: 414 ----SSKHALAKYQAQC---PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV 466
+ H K +C P+G K+ GS D +++W+ ++ L ++ GH +N +
Sbjct: 302 KIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTS-RRILYKLPGHAGSVNEL 360
Query: 467 EFSPDGRIIASASFDKSIKLWDGRI 491
F P+ II SAS DK +L+ G I
Sbjct: 361 AFHPEEPIILSASSDK--RLYMGEI 383
Score = 240 (89.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 75/258 (29%), Positives = 123/258 (47%)
Query: 332 VRVLTSHTRSVTCIR---WGGSGLIYSASQDRTIKVWRA-SDGVMCRTLEGHAHWVNTLA 387
+ +L+ H V C + WG + + SA DR I +W D TL+GH+ V L
Sbjct: 86 IMLLSGHEGEVYCCKFHPWGNT--LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 143
Query: 388 LSTDYLMRVEATSTGGFK-YDPANPEESSK-HALAKYQAQC-P--EGEKLV-SGSDDFTL 441
+TD M A++ +D E + + C P G +LV +GSDD T+
Sbjct: 144 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 203
Query: 442 FLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH 501
LW+ K K ++ Q++ V F+ I S D IK+WD R K T+RGH
Sbjct: 204 KLWDIRK-KAAVQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH 261
Query: 502 VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT----KKIEQDLPG--HGDE--VYAVDWA 553
+V ++ SS+ L+S + D+T+++W+++ ++ + G H E + W+
Sbjct: 262 ADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 321
Query: 554 PDGEKVASGGKDKVLRLW 571
PDG K+A G D+ + +W
Sbjct: 322 PDGSKIAGGSADRFVYVW 339
Score = 228 (85.3 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 68/273 (24%), Positives = 125/273 (45%)
Query: 313 ASSGKDGAIRIWDVILSQC--VRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASD 369
AS+G D I +W+V C L H+ +V + + G +++SAS D+T+ VW +
Sbjct: 109 ASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 167
Query: 370 GVMCRTLEGHAHWVNTL--ALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC- 426
G + L+GH +VN+ A L+ + G K + + + YQ
Sbjct: 168 GERVKRLKGHTSFVNSCYPARRGPQLV-CTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAV 226
Query: 427 ---PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
++++SG D + +W+ + K + M GH + + S +G + S + D +
Sbjct: 227 TFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNT 285
Query: 484 IKLWDGRI----GKFITTLRGHV----QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
+++WD R + + +G+V + + +WS D + GSAD + VW+ +++
Sbjct: 286 VRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRR 345
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
I LPGH V + + P+ + S DK L
Sbjct: 346 ILYKLPGHAGSVNELAFHPEEPIILSASSDKRL 378
Score = 171 (65.3 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 55/206 (26%), Positives = 92/206 (44%)
Query: 106 MPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
+ GH V S + G L +GS D TV+ WD+ + + + T + V
Sbjct: 174 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNT---YQVLAVTFND 230
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
T ++ N +V D+ +Q + T +M GHA++V + S G L S
Sbjct: 231 TSDQIISGGIDNDIKVWDL---RQ--------NKLTYTMRGHADSVTGLSLSSEGSYLLS 279
Query: 225 GSGDTTVRFWDVTTQTPLFKC----EGHKHW----VLCIAWSPDSKQLVSGCKNGVIHAW 276
+ D TVR WDV P +C +G+ H +L +WSPD ++ G + ++ W
Sbjct: 280 NAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVW 339
Query: 277 DSSTGKQIGQPMRGHKQWITALSWEP 302
D+ T ++I + GH + L++ P
Sbjct: 340 DT-TSRRILYKLPGHAGSVNELAFHP 364
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 227 (85.0 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 89/355 (25%), Positives = 149/355 (41%)
Query: 19 SDDGEVAGDLLDLPLNVNTEHLSLIV---NSLLQQDEGTPYLFYVNETEITKTLADVLPL 75
++D E G LL L L T L + N LL Q TP L + + DVL +
Sbjct: 297 AEDEERLG-LLQLLLLPRTGRLITVTAEHNILLYQ---TPTLAV--QQQFVGYNDDVLDV 350
Query: 76 DTLNTEEVVDIVYQKQAVFQVRPV-TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTV 134
+ ++ V + +V + T + GH + ++S+ G A+ + D +V
Sbjct: 351 KFVGKDDTHIAVATNSSQLKVFELSTNSCQILHGHTDTILSIDVFRKGSMFATCAKDKSV 410
Query: 135 RFWDVTTQTPLFKC--EGTPYLFYVNETEITKTLADVLPLDTLN-TEEVVDIVYQKQAVF 191
R W + + C +GT + V ++ + + + T +V D+ A
Sbjct: 411 RVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEG 470
Query: 192 QVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHW 251
+ R T H + V SV SPN + LASGS D T + W ++ L C GH+
Sbjct: 471 VMMMKARSTER--AHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRG 528
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V + +SP + L S +G + W + + GH + + + + +
Sbjct: 529 VWSVQFSPVDQILGSASADGSVRIWSIQDFSCL-KTFEGHDASVLKIIFVS-----RGTQ 582
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVW 365
SSG DG +++W + ++CVR L +H V + G L+ + S D TI VW
Sbjct: 583 LVSSGSDGLVKLWTIKTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVW 637
Score = 201 (75.8 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 50/175 (28%), Positives = 81/175 (46%)
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
E T G A E + P + L SGS D T LW + + L
Sbjct: 464 ETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLW-ALSDLRLLGVC 522
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRL 516
GH++ + V+FSP +I+ SAS D S+++W + + T GH +V + + S
Sbjct: 523 RGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQ 582
Query: 517 LVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
LVS +D +K+W +KT + + L H D+V+A+ E + +G D + +W
Sbjct: 583 LVSSGSDGLVKLWTIKTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVW 637
Score = 170 (64.9 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 70/246 (28%), Positives = 105/246 (42%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRS-LASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
C + GH+ AV S+ S + + SGS D TV+ WD+ T EG + T
Sbjct: 424 CVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTG---AEGV-MMMKARST 479
Query: 161 EIT--KTLADVL--PLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFS 216
E K + V P D L D + A+ +R + C GH V SV+FS
Sbjct: 480 ERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCR----GHRRGVWSVQFS 535
Query: 217 PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
P + L S S D +VR W + + L EGH VL I + QLVS +G++ W
Sbjct: 536 PVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLW 595
Query: 277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT 336
T + + + + H+ + AL H + + D I +W L + V ++
Sbjct: 596 TIKTNECV-RTLDAHQDKVWAL-----HGGCRDELMVTGSADSTITVWTDKLRKTV-IIK 648
Query: 337 SHTRSV 342
S T+ V
Sbjct: 649 S-TKKV 653
Score = 163 (62.4 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 68/289 (23%), Positives = 124/289 (42%)
Query: 190 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC---- 245
VF++ T + GH + ++S+ G A+ + D +VR W + + C
Sbjct: 371 VFELS--TNSCQILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQG 428
Query: 246 EGHKHWVLCIAWSPDSKQ-LVSGCKNGVIHAWD--SSTGKQIGQPM------RGHKQWIT 296
GH + V IA S +Q +VSG ++ + WD +TG + M R H++ +
Sbjct: 429 TGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVN 488
Query: 297 ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYS 355
++ P N + AS +D ++W + + + V H R V +++ ++ S
Sbjct: 489 SVCVSP---NDKL--LASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGS 543
Query: 356 ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS 415
AS D ++++W D +T EGH V + + V + S G K E
Sbjct: 544 ASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECV 603
Query: 416 KHALAKYQAQ-------CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT 457
+ L +Q + C + E +V+GS D T+ +W + K + + T
Sbjct: 604 R-TLDAHQDKVWALHGGCRD-ELMVTGSADSTITVWTDKLRKTVIIKST 650
Score = 162 (62.1 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 60/234 (25%), Positives = 106/234 (45%)
Query: 362 IKVWRASDGVMCRTLEGHAHW-VNTLALSTDYLMRVEATST-----GGFKYDPANPEESS 415
I + + S G + ++E + ALS D M V A+ +K +
Sbjct: 44 INILQISTGKIIHSIEQEDQEDITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRA 103
Query: 416 KHAL--AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD-G 472
H++ A C L +G D T+ LW+ K+ + + G +++ VEF PD
Sbjct: 104 VHSVPVASMSFDCTS-TLLATGGCDGTIKLWDVIKQYCT-HNLKGSSGVVHLVEFHPDIS 161
Query: 473 RI-IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
R+ + S+S D +I++WD R + + L H V +A+S D LVS D VW++
Sbjct: 162 RLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDL 221
Query: 532 KTKKIEQDLPGHGDEVYAV-------DWAPDGEK-----VASGGKDKVLRLWQN 573
+ +K+++ +P + + V V D++ G K + + G VLR+W +
Sbjct: 222 QEQKVKRTIPVY-EAVEGVVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDS 274
Score = 160 (61.4 bits), Expect = 8.6e-18, Sum P(2) = 8.6e-18
Identities = 62/222 (27%), Positives = 97/222 (43%)
Query: 331 CVRVLTSHTR---SVTCIRWGGSGLIYSASQDRTIKVW-----RASDGVM---CRTLE-G 378
CV T H+ S+ C R + S SQD T+KVW ++GVM R+ E
Sbjct: 424 CVAQGTGHSNAVGSIACSRMKQQ-FVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERA 482
Query: 379 HAHWVNTLALS-TDYLMRV---EATSTGGFKYDPANPEESSKHALAKYQAQ-CPEGEKLV 433
H VN++ +S D L+ + T+ D H + Q P + L
Sbjct: 483 HEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILG 542
Query: 434 SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK 493
S S D ++ +W+ + + L GH + + F G + S+ D +KLW + +
Sbjct: 543 SASADGSVRIWSIQ-DFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNE 601
Query: 494 FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
+ TL H V+ + L+V+GSADST+ VW K +K
Sbjct: 602 CVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWTDKLRK 643
Score = 144 (55.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 81/379 (21%), Positives = 153/379 (40%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD-SK-Q 263
H+ V S+ F LA+G D T++ WDV Q +G V + + PD S+ Q
Sbjct: 105 HSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQ 164
Query: 264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRI 323
L S + I WD + + + + H +TAL++ P H SSG+D +
Sbjct: 165 LFSSSSDCAIRIWDLRSSRCVCV-LESHYSPVTALAFSPD--GHT---LVSSGRDKICSV 218
Query: 324 WDVILSQCVRVLTSHTRSVTCIRWGGSGLIYS---ASQDRTIKVWRASDGVMCRTLEGHA 380
WD+ + R + + + GS YS D V S GV+ R + +
Sbjct: 219 WDLQEQKVKRTIPVYEAVEGVVLLSGSA-DYSEMGVKSDALHLVTAGSKGVL-RVWDSSS 276
Query: 381 HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT 440
+ + T L +A+S + + E+ + L + P +L++ + +
Sbjct: 277 ----SRCVFTQTLP--DASS----HTEDEDAEDEERLGLLQLLL-LPRTGRLITVTAEHN 325
Query: 441 LFLWN-PEKEKKSLARMTGHQQLINCVEF-SPDGRIIASASFDKSIKLWDGRIGKFITTL 498
+ L+ P + + G+ + V+F D IA A+ +K+++ L
Sbjct: 326 ILLYQTPTLAVQQ--QFVGYNDDVLDVKFVGKDDTHIAVATNSSQLKVFELSTNS-CQIL 382
Query: 499 RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK-----IEQDLPGHGDEVYAVDWA 553
GH + + + + + D +++VW M + Q GH + V ++ +
Sbjct: 383 HGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGT-GHSNAVGSIACS 441
Query: 554 PDGEK-VASGGKDKVLRLW 571
++ V SG +D +++W
Sbjct: 442 RMKQQFVVSGSQDCTVKVW 460
Score = 143 (55.4 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 39/141 (27%), Positives = 64/141 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPN-GR-SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIA 256
CT ++ G + V V+F P+ R L S S D +R WD+ + + E H V +A
Sbjct: 140 CTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALA 199
Query: 257 WSPDSKQLVSGCKNGVIHAWDSSTGK-QIGQPMRGHKQWITALS----WEPFHLNHQCRR 311
+SPD LVS ++ + WD K + P+ + + LS + +
Sbjct: 200 FSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEGVVLLSGSADYSEMGVKSDALH 259
Query: 312 FASSGKDGAIRIWDVILSQCV 332
++G G +R+WD S+CV
Sbjct: 260 LVTAGSKGVLRVWDSSSSRCV 280
Score = 143 (55.4 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 67/287 (23%), Positives = 114/287 (39%)
Query: 100 TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-----PLFKC-EGTPY 153
+RC + H V ++ FSP+G +L S D WD+ Q P+++ EG
Sbjct: 182 SRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEGVVL 241
Query: 154 LFYVNETEITKTLADVLPLDTLNTEEVVDI--VYQKQAVF-QVRP-VTRCTSSMPGHAE- 208
L + +D L L T ++ V+ + + VF Q P + T E
Sbjct: 242 LSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSSRCVFTQTLPDASSHTEDEDAEDEE 301
Query: 209 --AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW-SPDSKQLV 265
++ + P L + + + + + T + G+ VL + + D +
Sbjct: 302 RLGLLQLLLLPRTGRLITVTAEHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKDDTHIA 361
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ + ++ ST Q + GH T LS + F FA+ KD ++R+W
Sbjct: 362 VATNSSQLKVFELSTNSC--QILHGHTD--TILSIDVFRKGSM---FATCAKDKSVRVWR 414
Query: 326 VILSQ----CVRVLTSHTR---SVTCIRWGGSGLIYSASQDRTIKVW 365
+ +S CV T H+ S+ C R + S SQD T+KVW
Sbjct: 415 MDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQ-FVVSGSQDCTVKVW 460
Score = 142 (55.0 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 52/189 (27%), Positives = 81/189 (42%)
Query: 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-HKHWVLCIAWSPDSKQLVS 266
E + + SP+ L S S +R WD Q H V +++ S L +
Sbjct: 64 EDITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLAT 123
Query: 267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
G +G I WD + ++G + + FH + + SS D AIRIWD+
Sbjct: 124 GGCDGTIKLWDVIK-QYCTHNLKGSSGVVHLVE---FHPDISRLQLFSSSSDCAIRIWDL 179
Query: 327 ILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGH--AHWV 383
S+CV VL SH VT + + G + S+ +D+ VW + + RT+ + V
Sbjct: 180 RSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEGV 239
Query: 384 NTLALSTDY 392
L+ S DY
Sbjct: 240 VLLSGSADY 248
Score = 137 (53.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 77/398 (19%), Positives = 156/398 (39%)
Query: 125 LASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT--LADVLPLDTL-NTEEVV 181
L + +R WD ++ +F + P E E + +L L L T ++
Sbjct: 260 LVTAGSKGVLRVWDSSSSRCVFT-QTLPDASSHTEDEDAEDEERLGLLQLLLLPRTGRLI 318
Query: 182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKF-SPNGRSLASGSGDTTVRFWDVTTQT 240
+ + + P G+ + V+ VKF + +A + + ++ ++++T +
Sbjct: 319 TVTAEHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKDDTHIAVATNSSQLKVFELSTNS 378
Query: 241 PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW--DSSTGKQ--IGQPMRGHKQWIT 296
GH +L I + K+ + W D S+G+ + Q GH +
Sbjct: 379 CQI-LHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGT-GHSNAVG 436
Query: 297 ALSWEPFHLNHQCRRFASSG-KDGAIRIWD---------VILSQCVRVLTSHTRSVT--C 344
+++ + ++F SG +D +++WD V++ + +H + V C
Sbjct: 437 SIA-----CSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVC 491
Query: 345 IRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS-TDYLMRVEATSTGG 403
+ L+ S SQDRT K+W SD + GH V ++ S D ++ A++ G
Sbjct: 492 VS-PNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILG-SASADGS 549
Query: 404 FK------YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT 457
+ + E ++ K G +LVS D + LW K + + +
Sbjct: 550 VRIWSIQDFSCLKTFEGHDASVLKI-IFVSRGTQLVSSGSDGLVKLWTI-KTNECVRTLD 607
Query: 458 GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI 495
HQ + + ++ + S D +I +W ++ K +
Sbjct: 608 AHQDKVWALHGGCRDELMVTGSADSTITVWTDKLRKTV 645
Score = 127 (49.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 47/189 (24%), Positives = 82/189 (43%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H+ V S+ F LA+G D T++ WDV Q +G+ + ++ E D
Sbjct: 105 HSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFH-----PD 159
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
+ L ++ D + ++ +R +RC + H V ++ FSP+G +L S D
Sbjct: 160 ISRLQLFSSSS--DCAIR---IWDLRS-SRCVCVLESHYSPVTALAFSPDGHTLVSSGRD 213
Query: 229 TTVRFWDVTTQT-----PLFKC-EGHKHWVLCIAWSPDSKQ---------LVSGCKNGVI 273
WD+ Q P+++ EG V+ ++ S D + LV+ GV+
Sbjct: 214 KICSVWDLQEQKVKRTIPVYEAVEG----VVLLSGSADYSEMGVKSDALHLVTAGSKGVL 269
Query: 274 HAWDSSTGK 282
WDSS+ +
Sbjct: 270 RVWDSSSSR 278
Score = 82 (33.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
D+ + V+ ++ S LKV+ + T Q L GH D + ++D G A+ KDK +R+W+
Sbjct: 357 DTHIAVATNS-SQLKVFELSTNSC-QILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWR 414
Score = 65 (27.9 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 34/149 (22%), Positives = 62/149 (41%)
Query: 102 CTSSMPGHAEAVISVKFSPN-GR-SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNE 159
CT ++ G + V V+F P+ R L S S D +R WD+ + +C Y
Sbjct: 140 CTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSS----RCVCVLESHYSPV 195
Query: 160 TEITKTLADVLPLDTLNTEEVVDIV-YQKQAVFQVRPVTRCTSS---MPGHAE-AVISVK 214
T + + D L + +++ + Q+Q V + PV + G A+ + + VK
Sbjct: 196 TALAFS-PDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEGVVLLSGSADYSEMGVK 254
Query: 215 FSPNGRSLASGSGDTTVRFWDVTTQTPLF 243
+ L + +R WD ++ +F
Sbjct: 255 --SDALHLVTAGSKGVLRVWDSSSSRCVF 281
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 257 (95.5 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 86/300 (28%), Positives = 130/300 (43%)
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
G + +K +T+L W N A+ DG RIW L H +
Sbjct: 232 GHDVPSNKD-VTSLDW-----NSDGTLLATGSYDGFARIWTED-GNLASTLGQHKGPIFA 284
Query: 345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA------HWVN--TLA-LSTDYLM 394
++W G I SA D+T +W A G + H+ W N T A STD M
Sbjct: 285 LKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTD--M 342
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
+ G + P + + + + P G L S SDD TL +W+ K+ +
Sbjct: 343 CIHVCRLGCDR--PVKTFQGHTNEVNAIKWD-PSGMLLASCSDDMTLKIWSM-KQDACVH 398
Query: 455 RMTGHQQLINCVEFSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ H + I +++SP G ++ASASFD +++LWD G I TL H + V
Sbjct: 399 DLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPV 458
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
Y VA+S D + L SGS D + +WN ++ + G G ++ V W G+KV + D
Sbjct: 459 YSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGG-IFEVCWNARGDKVGASASD 517
Score = 222 (83.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 63/265 (23%), Positives = 118/265 (44%)
Query: 326 VILSQCVRVLTSH----TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++L C+R H + VT + W G L+ + S D ++W DG + TL H
Sbjct: 222 LVLRHCIRE-GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQHK 279
Query: 381 HWVNTLALST--DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSG 435
+ L + +Y++ T +D E + H+ S
Sbjct: 280 GPIFALKWNKKGNYILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASC 338
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI 495
S D + + ++ + GH +N +++ P G ++AS S D ++K+W + +
Sbjct: 339 STDMCIHVCRLGCDRP-VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACV 397
Query: 496 TTLRGHVQAVYMVAWS---------SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
L+ H + +Y + WS + + +L S S DST+++W+++ L H +
Sbjct: 398 HDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEP 457
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
VY+V ++PDG+ +ASG DK + +W
Sbjct: 458 VYSVAFSPDGKYLASGSFDKCVHIW 482
Score = 165 (63.1 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 59/208 (28%), Positives = 85/208 (40%)
Query: 195 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV-------TTQTPLFKC-- 245
P ++ T + GH V ++P LASGSGD+T R W++ +TQ L C
Sbjct: 171 PPSKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 229
Query: 246 EG-H----KHWVLCIAWSPDSKQLVSGCKNGVIHAW--DSSTGKQIGQPMRGHKQWITAL 298
EG H V + W+ D L +G +G W D + +GQ HK I AL
Sbjct: 230 EGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQ----HKGPIFAL 285
Query: 299 SWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ 358
W N + S+G D IWD + + H+ + W + S S
Sbjct: 286 KW-----NKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCST 340
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTL 386
D I V R +T +GH + VN +
Sbjct: 341 DMCIHVCRLGCDRPVKTFQGHTNEVNAI 368
Score = 159 (61.0 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 43/181 (23%), Positives = 74/181 (40%)
Query: 204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ 263
P H+ + V + N + AS S D + + P+ +GH + V I W P S
Sbjct: 318 PFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGM 375
Query: 264 LVSGCKNGV-IHAWDSSTGKQIGQPMRGHKQWITALSWEPFH---LNHQCR-RFASSGKD 318
L++ C + + + W + ++ H + I + W P N AS+ D
Sbjct: 376 LLASCSDDMTLKIWSMKQDACV-HDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFD 434
Query: 319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLE 377
+R+WDV C+ LT H V + + G + S S D+ + +W G + +
Sbjct: 435 STVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYR 494
Query: 378 G 378
G
Sbjct: 495 G 495
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 56/229 (24%), Positives = 97/229 (42%)
Query: 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
P H+ + V + N + AS S D + + P+ +G + NE K
Sbjct: 318 PFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQG-----HTNEVNAIKWD 371
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----- 221
+ L + + + + I KQ C + H++ + ++K+SP G +
Sbjct: 372 PSGMLLASCSDDMTLKIWSMKQDA--------CVHDLQAHSKEIYTIKWSPTGPATSNPN 423
Query: 222 ----LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
LAS S D+TVR WDV + H+ V +A+SPD K L SG + +H W+
Sbjct: 424 SNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN 483
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ +G + RG I + W N + + +S DG++ + D+
Sbjct: 484 TQSGSLV-HSYRG-TGGIFEVCW-----NARGDKVGASASDGSVCVLDL 525
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEK---------KSLARMTGHQ----QLINCVEFSPDGR 473
P + L SGS D T +WN + + R GH + + ++++ DG
Sbjct: 192 PVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGT 251
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++A+ S+D ++W G +TL H ++ + W+ ++S D T +W+ T
Sbjct: 252 LLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT 310
Query: 534 KKIEQDLPGHGDEVYAVDW 552
+ +Q P H VDW
Sbjct: 311 GEAKQQFPFHSAPALDVDW 329
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/91 (36%), Positives = 47/91 (51%)
Query: 496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK------------IEQ---DL 540
T LRGH V++ AW+ S LL SGS DST ++WN+ I + D+
Sbjct: 176 TVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 235
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
P + D V ++DW DG +A+G D R+W
Sbjct: 236 PSNKD-VTSLDWNSDGTLLATGSYDGFARIW 265
Score = 130 (50.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 43/180 (23%), Positives = 77/180 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R + GH V ++K+ P+G LAS S D T++ W + K + + +
Sbjct: 353 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM-------KQDACVHDLQAHSK 405
Query: 161 EI-TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTR--CTSSMPGHAEAVISVKFSP 217
EI T + P + ++ + ++ V R C ++ H E V SV FSP
Sbjct: 406 EIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSP 465
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+G+ LASGS D V W+ + + + G + + W+ ++ + +G + D
Sbjct: 466 DGKYLASGSFDKCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLD 524
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 56/273 (20%), Positives = 104/273 (38%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGTPYLFYVNETE 161
S++ H + ++K++ G + S D T WD T F P L + +
Sbjct: 273 STLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDV--DWQ 330
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
T A + +T+ + + + RPV + GH V ++K+ P+G
Sbjct: 331 NNTTFA------SCSTDMCIHVC----RLGCDRPV----KTFQGHTNEVNAIKWDPSGML 376
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK---------QLVSGCKNGV 272
LAS S D T++ W + + + H + I WSP L S +
Sbjct: 377 LASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDST 436
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
+ WD G I + H++ + ++++ P + AS D + IW+ V
Sbjct: 437 VRLWDVERGVCI-HTLTKHQEPVYSVAFSP-----DGKYLASGSFDKCVHIWNTQSGSLV 490
Query: 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364
T + + W G + +++ D ++ V
Sbjct: 491 HSYRG-TGGIFEVCWNARGDKVGASASDGSVCV 522
Score = 74 (31.1 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 98 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
P ++ T + GH V ++P LASGSGD+T R W++
Sbjct: 171 PPSKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNL 211
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 257 (95.5 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 86/300 (28%), Positives = 130/300 (43%)
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
G + +K +T+L W N A+ DG RIW L H +
Sbjct: 232 GHDVPSNKD-VTSLDW-----NSDGTLLATGSYDGFARIWTED-GNLASTLGQHKGPIFA 284
Query: 345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA------HWVN--TLA-LSTDYLM 394
++W G I SA D+T +W A G + H+ W N T A STD M
Sbjct: 285 LKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTD--M 342
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
+ G + P + + + + P G L S SDD TL +W+ K+ +
Sbjct: 343 CIHVCRLGCDR--PVKTFQGHTNEVNAIKWD-PSGMLLASCSDDMTLKIWSM-KQDACVH 398
Query: 455 RMTGHQQLINCVEFSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ H + I +++SP G ++ASASFD +++LWD G I TL H + V
Sbjct: 399 DLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPV 458
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
Y VA+S D + L SGS D + +WN ++ + G G ++ V W G+KV + D
Sbjct: 459 YSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGG-IFEVCWNARGDKVGASASD 517
Score = 222 (83.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 63/265 (23%), Positives = 118/265 (44%)
Query: 326 VILSQCVRVLTSH----TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++L C+R H + VT + W G L+ + S D ++W DG + TL H
Sbjct: 222 LVLRHCIRE-GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQHK 279
Query: 381 HWVNTLALST--DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSG 435
+ L + +Y++ T +D E + H+ S
Sbjct: 280 GPIFALKWNKKGNYILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASC 338
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI 495
S D + + ++ + GH +N +++ P G ++AS S D ++K+W + +
Sbjct: 339 STDMCIHVCRLGCDRP-VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACV 397
Query: 496 TTLRGHVQAVYMVAWS---------SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
L+ H + +Y + WS + + +L S S DST+++W+++ L H +
Sbjct: 398 HDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEP 457
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
VY+V ++PDG+ +ASG DK + +W
Sbjct: 458 VYSVAFSPDGKYLASGSFDKCVHIW 482
Score = 165 (63.1 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 59/208 (28%), Positives = 85/208 (40%)
Query: 195 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV-------TTQTPLFKC-- 245
P ++ T + GH V ++P LASGSGD+T R W++ +TQ L C
Sbjct: 171 PPSKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 229
Query: 246 EG-H----KHWVLCIAWSPDSKQLVSGCKNGVIHAW--DSSTGKQIGQPMRGHKQWITAL 298
EG H V + W+ D L +G +G W D + +GQ HK I AL
Sbjct: 230 EGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQ----HKGPIFAL 285
Query: 299 SWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ 358
W N + S+G D IWD + + H+ + W + S S
Sbjct: 286 KW-----NKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCST 340
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTL 386
D I V R +T +GH + VN +
Sbjct: 341 DMCIHVCRLGCDRPVKTFQGHTNEVNAI 368
Score = 159 (61.0 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 43/181 (23%), Positives = 74/181 (40%)
Query: 204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ 263
P H+ + V + N + AS S D + + P+ +GH + V I W P S
Sbjct: 318 PFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGM 375
Query: 264 LVSGCKNGV-IHAWDSSTGKQIGQPMRGHKQWITALSWEPFH---LNHQCR-RFASSGKD 318
L++ C + + + W + ++ H + I + W P N AS+ D
Sbjct: 376 LLASCSDDMTLKIWSMKQDACV-HDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFD 434
Query: 319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLE 377
+R+WDV C+ LT H V + + G + S S D+ + +W G + +
Sbjct: 435 STVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYR 494
Query: 378 G 378
G
Sbjct: 495 G 495
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 56/229 (24%), Positives = 97/229 (42%)
Query: 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
P H+ + V + N + AS S D + + P+ +G + NE K
Sbjct: 318 PFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQG-----HTNEVNAIKWD 371
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----- 221
+ L + + + + I KQ C + H++ + ++K+SP G +
Sbjct: 372 PSGMLLASCSDDMTLKIWSMKQDA--------CVHDLQAHSKEIYTIKWSPTGPATSNPN 423
Query: 222 ----LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
LAS S D+TVR WDV + H+ V +A+SPD K L SG + +H W+
Sbjct: 424 SNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN 483
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ +G + RG I + W N + + +S DG++ + D+
Sbjct: 484 TQSGSLV-HSYRG-TGGIFEVCW-----NARGDKVGASASDGSVCVLDL 525
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEK---------KSLARMTGHQ----QLINCVEFSPDGR 473
P + L SGS D T +WN + + R GH + + ++++ DG
Sbjct: 192 PVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGT 251
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++A+ S+D ++W G +TL H ++ + W+ ++S D T +W+ T
Sbjct: 252 LLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT 310
Query: 534 KKIEQDLPGHGDEVYAVDW 552
+ +Q P H VDW
Sbjct: 311 GEAKQQFPFHSAPALDVDW 329
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/91 (36%), Positives = 47/91 (51%)
Query: 496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK------------IEQ---DL 540
T LRGH V++ AW+ S LL SGS DST ++WN+ I + D+
Sbjct: 176 TVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 235
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
P + D V ++DW DG +A+G D R+W
Sbjct: 236 PSNKD-VTSLDWNSDGTLLATGSYDGFARIW 265
Score = 130 (50.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 43/180 (23%), Positives = 77/180 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R + GH V ++K+ P+G LAS S D T++ W + K + + +
Sbjct: 353 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM-------KQDACVHDLQAHSK 405
Query: 161 EI-TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTR--CTSSMPGHAEAVISVKFSP 217
EI T + P + ++ + ++ V R C ++ H E V SV FSP
Sbjct: 406 EIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSP 465
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+G+ LASGS D V W+ + + + G + + W+ ++ + +G + D
Sbjct: 466 DGKYLASGSFDKCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLD 524
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 56/273 (20%), Positives = 104/273 (38%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGTPYLFYVNETE 161
S++ H + ++K++ G + S D T WD T F P L + +
Sbjct: 273 STLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDV--DWQ 330
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
T A + +T+ + + + RPV + GH V ++K+ P+G
Sbjct: 331 NNTTFA------SCSTDMCIHVC----RLGCDRPV----KTFQGHTNEVNAIKWDPSGML 376
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK---------QLVSGCKNGV 272
LAS S D T++ W + + + H + I WSP L S +
Sbjct: 377 LASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDST 436
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
+ WD G I + H++ + ++++ P + AS D + IW+ V
Sbjct: 437 VRLWDVERGVCI-HTLTKHQEPVYSVAFSP-----DGKYLASGSFDKCVHIWNTQSGSLV 490
Query: 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364
T + + W G + +++ D ++ V
Sbjct: 491 HSYRG-TGGIFEVCWNARGDKVGASASDGSVCV 522
Score = 74 (31.1 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 98 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
P ++ T + GH V ++P LASGSGD+T R W++
Sbjct: 171 PPSKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNL 211
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 295 (108.9 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 121/489 (24%), Positives = 207/489 (42%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H + V+ FS + +A+ S D V+ WD T + + + VN T
Sbjct: 656 HEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYD--EHSEQVNCCHFTNKSNH 713
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
+L L T + + + + Q C ++M GH +V +FSP+ LAS S D
Sbjct: 714 LL-LATGSNDFFLKLWDLNQK--------ECRNTMFGHTNSVNHCRFSPDDELLASCSAD 764
Query: 229 TTVRFWDVTTQTPLFKCEGHKHW-------------VLCIAWSPDSKQLVSGCKNGVIHA 275
T+R WDV + + + V C +WS D +++ KN V+
Sbjct: 765 GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVL-L 823
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
+D T + + GH I + P+ +H A S + +W++ V
Sbjct: 824 FDIHTSGLLAEIHTGHHSTIQYCDFSPY--DHLAV-IALS--QYCVELWNIDSRLKVADC 878
Query: 336 TSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVMCRT----LEGHAHWV----NTL 386
H V + + G + +AS D+TI+VW +C+ L+ V T+
Sbjct: 879 RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKK--VCKNSAIVLKQEIDVVFQENETM 936
Query: 387 ALSTDYL--MRVEATSTGGFKYDPANPEESSKHALAKYQAQC--PEGEKLVSGSDDFTLF 442
L+ D + +++ A TG Y P A+ C P E + G +D +
Sbjct: 937 VLAVDNIRGLQLIAGKTGQIDYLPE----------AQVSCCCLSPHLEYVAFGDEDGAIK 986
Query: 443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV 502
+ + + GH++ + ++F+ DG+ + S+S D I++W+ + G ++ L+ H
Sbjct: 987 IIELPNNRV-FSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVF-LQAHQ 1044
Query: 503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASG 562
+ V DSRLL S S D T+KVWN+ T +IE+D H V + + D K +S
Sbjct: 1045 ETVKDFRLLQDSRLL-SWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSST 1103
Query: 563 GKDKVLRLW 571
DK ++W
Sbjct: 1104 SADKTAKIW 1112
Score = 219 (82.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 89/386 (23%), Positives = 165/386 (42%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H +AV FS +G+ +AS D T++ + T L + H+ VLC A+S D +
Sbjct: 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIA 673
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ + + WDS+TGK + H + + + NH A+ D +++WD
Sbjct: 674 TCSADKKVKIWDSATGKLV-HTYDEHSEQVNCCHFTN-KSNHLL--LATGSNDFFLKLWD 729
Query: 326 VILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
+ +C + HT SV R+ L+ S S D T+++W +++ +++
Sbjct: 730 LNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLS 789
Query: 385 TLALSTDYLMRVEATS--TGGFKYDPANPEE----------------SSKHALAKYQAQC 426
+ D + V+ S G K A + + H+ +Y
Sbjct: 790 SEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFS 849
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P V + + LWN + K +A GH ++ V FSPDG +AS D++I++
Sbjct: 850 PYDHLAVIALSQYCVELWNIDSRLK-VADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRV 908
Query: 487 WDGR-IGK-FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG 544
W+ + + K L+ + V+ +++ +L + L++ KT +I+ LP
Sbjct: 909 WETKKVCKNSAIVLKQEIDVVFQ---ENETMVLAVDNIRG-LQLIAGKTGQIDY-LPEA- 962
Query: 545 DEVYAVDWAPDGEKVASGGKDKVLRL 570
+V +P E VA G +D +++
Sbjct: 963 -QVSCCCLSPHLEYVAFGDEDGAIKI 987
Score = 219 (82.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 104/481 (21%), Positives = 190/481 (39%)
Query: 109 HAEAVISVKFS--PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPY--LFYVNETEIT- 163
H+E V F+ N LA+GS D ++ WD+ + +C T + VN +
Sbjct: 698 HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK----ECRNTMFGHTNSVNHCRFSP 753
Query: 164 --KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISV-KFSPNGR 220
+ LA TL +V +K V+ + P E ++ +S +G
Sbjct: 754 DDELLASCSADGTLRLWDVRSANERKS--INVKRFFLSSEDPPEDVEVIVKCCSWSADGD 811
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCE-GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + + + F D+ T L + GH + +SP V + W+
Sbjct: 812 KIIVAAKNKVLLF-DIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNID 870
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD---------VILSQ 330
+ ++ RGH W+ + + P F ++ D IR+W+ ++L Q
Sbjct: 871 SRLKVAD-CRGHLSWVHGVMFSP-----DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQ 924
Query: 331 CVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST 390
+ V+ ++ GL A + I + V C L H +V
Sbjct: 925 EIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQ-VSCCCLSPHLEYV-AFGDED 982
Query: 391 DYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK 450
+ +E + F + +++ +H ++ A +G+ L+S S+D + +WN +
Sbjct: 983 GAIKIIELPNNRVFSSGVGH-KKAVRHI--QFTA---DGKTLISSSEDSVIQVWN--WQT 1034
Query: 451 KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW 510
+ HQ+ + D R++ S SFD ++K+W+ G+ H V A
Sbjct: 1035 GDYVFLQAHQETVKDFRLLQDSRLL-SWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAI 1093
Query: 511 SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL 570
SSD+ S SAD T K+W+ +L GH V ++ DG +A+G + +R+
Sbjct: 1094 SSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRI 1153
Query: 571 W 571
W
Sbjct: 1154 W 1154
Score = 176 (67.0 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 92/370 (24%), Positives = 149/370 (40%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH V V FSP+G S + S D T+R W+ T + C K+ + + D +
Sbjct: 880 GHLSWVHGVMFSPDGSSFLTASDDQTIRVWE-TKKV----C---KNSAIVLKQEID---V 928
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
V ++ A D+ G Q+ G ++ L+ A +DGAI+I
Sbjct: 929 VFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKII 988
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
++ ++ H ++V I++ G + S+S+D I+VW G L+ H V
Sbjct: 989 ELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYV-FLQAHQETV 1047
Query: 384 NTLAL---------STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS 434
L S D ++V TG + D + A + K S
Sbjct: 1048 KDFRLLQDSRLLSWSFDGTVKVWNVITGRIERD-----FTCHQGTVLSCAISSDATKFSS 1102
Query: 435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF 494
S D T +W+ + L + GH + C FS DG ++A+ + I++W+ G+
Sbjct: 1103 TSADKTAKIWSFDL-LSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQL 1161
Query: 495 ------ITTLRG---HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD 545
I+ G H V V +S DS+ LVS A LK WN+ T Q +G
Sbjct: 1162 LHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVS--AGGYLKWWNVATGDSSQTFYTNGT 1219
Query: 546 EVYAVDWAPD 555
+ + +PD
Sbjct: 1220 NLKKIHVSPD 1229
Score = 169 (64.5 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 49/166 (29%), Positives = 82/166 (49%)
Query: 411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL-WNPEKEKKSLARMT--GHQQLINCVE 467
PE S + AK QA+ EG+ +G L+L W +K K+L+R+ H +
Sbjct: 571 PETSEVYRQAKLQAK-QEGD---TGR----LYLEWINKKTIKNLSRLVVRPHTDAVYHAC 622
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527
FS DG+ IAS DK+++++ G+ + ++ H V A+SSD + + SAD +K
Sbjct: 623 FSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVK 682
Query: 528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV--ASGGKDKVLRLW 571
+W+ T K+ H ++V + + A+G D L+LW
Sbjct: 683 IWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728
Score = 161 (61.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 65/238 (27%), Positives = 102/238 (42%)
Query: 98 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYV 157
P R SS GH +AV ++F+ +G++L S S D+ ++ W+ T G Y+F
Sbjct: 991 PNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT--------GD-YVFLQ 1041
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFS 216
E K L D+ D + V+ V +T R H V+S S
Sbjct: 1042 AHQETVKDFR--LLQDSRLLSWSFDGTVK---VWNV--ITGRIERDFTCHQGTVLSCAIS 1094
Query: 217 PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
+ +S S D T + W +PL + +GH V C A+S D L +G NG I W
Sbjct: 1095 SDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIW 1154
Query: 277 DSSTGKQIGQ--PM---RG---HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ S G+ + P+ G H W+T + + P + S+G G ++ W+V
Sbjct: 1155 NVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSP-----DSKTLVSAG--GYLKWWNV 1205
Score = 158 (60.7 bits), Expect = 4.3e-16, Sum P(3) = 4.3e-16
Identities = 41/179 (22%), Positives = 71/179 (39%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET- 160
C ++M GH +V +FSP+ LAS S D T+R WDV + K F +E
Sbjct: 735 CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANER-KSINVKRFFLSSEDP 793
Query: 161 -EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNG 219
E + + + ++++ K +F + GH + FSP
Sbjct: 794 PEDVEVIVKCCSWSA-DGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD 852
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS 278
V W++ ++ + C GH WV + +SPD ++ + I W++
Sbjct: 853 HLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWET 911
Score = 133 (51.9 bits), Expect = 4.3e-16, Sum P(3) = 4.3e-16
Identities = 50/196 (25%), Positives = 87/196 (44%)
Query: 386 LALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
++ S D +++V TG + + A+ E L + +L+S S D T+ +WN
Sbjct: 1019 ISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLL-------QDSRLLSWSFDGTVKVWN 1071
Query: 446 PEKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
+ + R T HQ + S D +S S DK+ K+W + + L+GH
Sbjct: 1072 VITGR--IERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGC 1129
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKK---------IEQDLPGHGDEVYAVDWAPD 555
V A+S D LL +G + +++WN+ + +E+ HG V V ++PD
Sbjct: 1130 VRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPD 1189
Query: 556 GEKVASGGKDKVLRLW 571
+ + S G L+ W
Sbjct: 1190 SKTLVSAGG--YLKWW 1203
Score = 127 (49.8 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 41/159 (25%), Positives = 74/159 (46%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEK--EKKSL--AR--MTGH------QQLINCVEFSPDGRI 474
P+ E L S S D TL LW+ E+KS+ R ++ + ++ C +S DG
Sbjct: 753 PDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK 812
Query: 475 IASASFDKSIKLWDGRIGKFITTLR-GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
I A+ +K + L+D + + GH + +S L V + +++WN+ +
Sbjct: 813 IIVAAKNK-VLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDS 871
Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
+ D GH V+ V ++PDG + D+ +R+W+
Sbjct: 872 RLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910
Score = 45 (20.9 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 3 VDDDKITTKRILTRFKSDDGEVAG-DLLDLPLNVNTEHLSLIVNSLLQQDEGTP 55
V D + K ++ +S G G ++L L +N+ E L +S++++ +G+P
Sbjct: 269 VTDSVMGPKHVVP-VESGLGREKGLEILSLFVNMKKEDLPAEAHSIIKECKGSP 321
Score = 45 (20.9 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 11/70 (15%), Positives = 23/70 (32%)
Query: 81 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 140
++++ K +F + GH + FSP V W++
Sbjct: 811 DKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNID 870
Query: 141 TQTPLFKCEG 150
++ + C G
Sbjct: 871 SRLKVADCRG 880
>FB|FBgn0028496 [details] [associations]
symbol:CG30116 species:7227 "Drosophila melanogaster"
[GO:0016505 "apoptotic protease activator activity" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
UCSC:CG30116-RC FlyBase:FBgn0028496 EMBL:BT015296
ProteinModelPortal:Q6AWF2 PRIDE:Q6AWF2 InParanoid:Q6AWF2
ArrayExpress:Q6AWF2 Bgee:Q6AWF2 Uniprot:Q6AWF2
Length = 1923
Score = 254 (94.5 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 77/275 (28%), Positives = 122/275 (44%)
Query: 303 FHLNHQCRRFA-SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDR 360
F L+ ++ A +SG+ + + QC L HT V+C+++ +G + + S+DR
Sbjct: 1219 FDLSRDSQQMAIASGRHVHLMRINTPEYQCT--LEGHTAGVSCLKFAPNGEFLATGSEDR 1276
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA 420
+ +W + G +C + +GH V + + D L + A+ +
Sbjct: 1277 LVHIWNLALGEICNSFKGHTAPVVKVVVLMDSLRVISTDRDSMLLVWMAHSGNLLQTIQG 1336
Query: 421 KYQAQCPEGEK--LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
Y++ VS + D TL +W+ +E + + H I C E S D I S
Sbjct: 1337 PYKSLSVTNNMRFAVSTNGDNTLKIWSLTQEDEKYS--VSHSDEITCFEISADSVHIISG 1394
Query: 479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV-SGSADSTLKVWNMKTKKIE 537
S D S+K+W GK L GH AV VA S ++ V SGS D L +W++ T +
Sbjct: 1395 SRDMSLKVWQATGGKLSQVLVGHSDAVTCVAVSVTNKTQVLSGSKDMNLILWDLLTGEEV 1454
Query: 538 QDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
L GH V V + DG SG DK L +W+
Sbjct: 1455 HTLAGHLGPVIGVKVSADGSTAVSGSDDKTLIVWE 1489
Score = 234 (87.4 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 76/283 (26%), Positives = 131/283 (46%)
Query: 195 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLC 254
P +CT + GH V +KF+PNG LA+GS D V W++ +GH V+
Sbjct: 1244 PEYQCT--LEGHTAGVSCLKFAPNGEFLATGSEDRLVHIWNLALGEICNSFKGHTAPVVK 1301
Query: 255 IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
+ DS +++S ++ ++ W + +G + Q ++G ++ + + R S
Sbjct: 1302 VVVLMDSLRVISTDRDSMLLVWMAHSGNLL-QTIQG--------PYKSLSVTNNMRFAVS 1352
Query: 315 SGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMC 373
+ D ++IW + + + SH+ +TC + I S S+D ++KVW+A+ G +
Sbjct: 1353 TNGDNTLKIWS-LTQEDEKYSVSHSDEITCFEISADSVHIISGSRDMSLKVWQATGGKLS 1411
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGG--FKYDPANPEESSKHALAKYQAQC----- 426
+ L GH+ V +A+S +V + S +D EE H LA +
Sbjct: 1412 QVLVGHSDAVTCVAVSVTNKTQVLSGSKDMNLILWDLLTGEEV--HTLAGHLGPVIGVKV 1469
Query: 427 -PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
+G VSGSDD TL +W + K+ LA +T Q + F
Sbjct: 1470 SADGSTAVSGSDDKTLIVW---ETKRGLA-LTSLQMHVPFTHF 1508
Score = 220 (82.5 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 74/287 (25%), Positives = 119/287 (41%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
+ C S DS+Q+ V H +T + + GH ++ L + P N +
Sbjct: 1216 ITCFDLSRDSQQMAIASGRHV-HLMRINT-PEYQCTLEGHTAGVSCLKFAP---NGEF-- 1268
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDG 370
A+ +D + IW++ L + HT V + L + S +D + VW A G
Sbjct: 1269 LATGSEDRLVHIWNLALGEICNSFKGHTAPVVKVVVLMDSLRVISTDRDSMLLVWMAHSG 1328
Query: 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE-- 428
+ +T++G +L+++ + V K E+ + C E
Sbjct: 1329 NLLQTIQGP---YKSLSVTNNMRFAVSTNGDNTLKIWSLTQEDEKYSVSHSDEITCFEIS 1385
Query: 429 --GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRI-IASASFDKSIK 485
++SGS D +L +W K S + GH + CV S + + S S D ++
Sbjct: 1386 ADSVHIISGSRDMSLKVWQATGGKLSQV-LVGHSDAVTCVAVSVTNKTQVLSGSKDMNLI 1444
Query: 486 LWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
LWD G+ + TL GH+ V V S+D VSGS D TL VW K
Sbjct: 1445 LWDLLTGEEVHTLAGHLGPVIGVKVSADGSTAVSGSDDKTLIVWETK 1491
Score = 183 (69.5 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 75/294 (25%), Positives = 131/294 (44%)
Query: 240 TPLFKC--EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITA 297
TP ++C EGH V C+ ++P+ + L +G ++ ++H W+ + G +I +GH TA
Sbjct: 1243 TPEYQCTLEGHTAGVSCLKFAPNGEFLATGSEDRLVHIWNLALG-EICNSFKGH----TA 1297
Query: 298 LSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSAS 357
+ L R S+ +D + +W ++ + +S++ S +
Sbjct: 1298 PVVKVVVLMDSLR-VISTDRDSMLLVWMAHSGNLLQTIQGPYKSLSVTN--NMRFAVSTN 1354
Query: 358 QDRTIKVWRA-----------SDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKY 406
D T+K+W SD + C E A V+ ++ S D ++V +TGG K
Sbjct: 1355 GDNTLKIWSLTQEDEKYSVSHSDEITC--FEISADSVHIISGSRDMSLKVWQ-ATGG-KL 1410
Query: 407 DPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN--PEKEKKSLARMTGHQQLIN 464
S A+ +++SGS D L LW+ +E +LA GH +
Sbjct: 1411 SQVLVGHSD--AVTCVAVSVTNKTQVLSGSKDMNLILWDLLTGEEVHTLA---GHLGPVI 1465
Query: 465 CVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV 518
V+ S DG S S DK++ +W+ + G +T+L+ HV + SR+LV
Sbjct: 1466 GVKVSADGSTAVSGSDDKTLIVWETKRGLALTSLQMHVPFTHFDISLEVSRVLV 1519
Score = 117 (46.2 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
I C + S D + +A AS + + L ++ TL GH V + ++ + L +GS
Sbjct: 1216 ITCFDLSRDSQQMAIAS-GRHVHLMRINTPEYQCTLEGHTAGVSCLKFAPNGEFLATGSE 1274
Query: 523 DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
D + +WN+ +I GH V V D +V S +D +L +W
Sbjct: 1275 DRLVHIWNLALGEICNSFKGHTAPVVKVVVLMDSLRVISTDRDSMLLVW 1323
Score = 113 (44.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 51/195 (26%), Positives = 86/195 (44%)
Query: 222 LASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSP--DSKQLVSGCKNGVIHAWD 277
LA+ SGD V+ W + + + +FK GH V C+ +P DS+ L++G ++ + W
Sbjct: 914 LATSSGD--VQQWHIMSNSLDHIFK--GHTAAVTCLLVAPQSDSELLLTGSEDATVLVWH 969
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS 337
++ H IT ++ N+ SS +D +I I D+ + +T
Sbjct: 970 VGLRERRAHIKNAHTAPITGVA---AGANNTL--IISSSEDASIAITDLASGKLRHRITH 1024
Query: 338 HTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHA-------HW--VNTLA 387
H V+ I G+ ++ S DRTI VW + + T++ + W V LA
Sbjct: 1025 HRGPVSGIVVAGACDVLISGGLDRTICVWDLDNFTLLNTMQMTSAVLRIDISWNSVFLLA 1084
Query: 388 LSTDYLMRVEATSTG 402
L D + V +TG
Sbjct: 1085 LCEDNALYVRTLATG 1099
Score = 93 (37.8 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 50/194 (25%), Positives = 80/194 (41%)
Query: 108 GHAEAVISVKFSPNGRS--LASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
GH AV + +P S L +GS D TV W V + E ++ + IT
Sbjct: 937 GHTAAVTCLLVAPQSDSELLLTGSEDATVLVWHVGLR------ERRAHIKNAHTAPITGV 990
Query: 166 LADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG 225
A +++ E I A ++R R T H V + + L SG
Sbjct: 991 AAGANNTLIISSSEDASIAITDLASGKLRH--RITH----HRGPVSGIVVAGACDVLISG 1044
Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285
D T+ WD+ T L VL I S +S L++ C++ ++ +TGK++
Sbjct: 1045 GLDRTICVWDLDNFT-LLNTMQMTSAVLRIDISWNSVFLLALCEDNALYVRTLATGKEL- 1102
Query: 286 QPMRGHKQWITALS 299
++GHK I ++S
Sbjct: 1103 HTLKGHKSKIRSIS 1116
Score = 65 (27.9 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC 268
AV+ + S N L + D + + T L +GHK + I+ DS++ V GC
Sbjct: 1069 AVLRIDISWNSVFLLALCEDNALYVRTLATGKELHTLKGHKSKIRSISIGKDSQRCVVGC 1128
Query: 269 KNGVIHAWDSSTGKQI 284
+ +D GK +
Sbjct: 1129 DDTRALIYDMHAGKLV 1144
Score = 40 (19.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 24/114 (21%), Positives = 43/114 (37%)
Query: 125 LASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV 184
L SG D T+ WD+ T L N ++T VL +D ++ V +
Sbjct: 1041 LISGGLDRTICVWDLDNFTLL------------NTMQMTSA---VLRID-ISWNSVFLLA 1084
Query: 185 YQKQAVFQVRPVT--RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 236
+ VR + + ++ GH + S+ + + G DT +D+
Sbjct: 1085 LCEDNALYVRTLATGKELHTLKGHKSKIRSISIGKDSQRCVVGCDDTRALIYDM 1138
Score = 39 (18.8 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 7/35 (20%), Positives = 15/35 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
++ GH + S+ + + G DT +D+
Sbjct: 1104 TLKGHKSKIRSISIGKDSQRCVVGCDDTRALIYDM 1138
Score = 37 (18.1 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 295 ITALSWEPFHLNHQCRRFASS 315
+TALSW P L + SS
Sbjct: 494 VTALSWLPTSLPWNVQIICSS 514
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 264 (98.0 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 93/354 (26%), Positives = 154/354 (43%)
Query: 161 EITKTLAD--VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMP-----GHAEAVISV 213
E K +AD V+P+ + Q Q + + P + P GH V
Sbjct: 3 EPKKRVADMAVVPVGVKRPRTELVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVYCC 62
Query: 214 KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-EGHKHWVLCIAWSPDSKQLVSGCKNGV 272
KF PNG +LAS D + W+V + +GH V+ + ++ D L S +
Sbjct: 63 KFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKT 122
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD-GAIRIWDVILSQC 331
+ WDS TG+++ + ++GH ++ S P Q A +G D G +++WD+
Sbjct: 123 VCVWDSETGERVKR-LKGHTSFVN--SCFPARRGPQ---LACTGSDDGTVKLWDIRKKAS 176
Query: 332 VRVLTSHTRSVTCIRWGG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST 390
V +T V + + S I S D IKVW + +++GH V L+LS
Sbjct: 177 VHTF-QNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSA 235
Query: 391 D--YLMRVEA-TSTGGFKYDPANPEE-------SSKHALAKYQAQCP---EGEKLVSGSD 437
D YL+ S + P P+E + H K +C +G K+ +GS
Sbjct: 236 DGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSA 295
Query: 438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491
D +++W+ ++ + ++ GH +N V F P+ I+ S S DK +L+ G I
Sbjct: 296 DRFVYIWDTTT-RRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDK--RLYIGEI 346
Score = 263 (97.6 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 79/283 (27%), Positives = 132/283 (46%)
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT--SHTRSVTCIRWGGSG-LIYSASQD 359
FH N ASSG D I +W+V C T H+ +V + + G L++SAS D
Sbjct: 64 FHPNGAT--LASSGYDRLILMWNVY-GDCENYATLKGHSGAVMELHYNTDGSLLFSASTD 120
Query: 360 RTIKVWRASDGVMCRTLEGHAHWVNT-LALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418
+T+ VW + G + L+GH +VN+ + + G K +++S H
Sbjct: 121 KTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIR-KKASVHT 179
Query: 419 LAK-YQAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR 473
YQ ++++SG D + +W+ ++ K + M GH + + S DG
Sbjct: 180 FQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDL-RQNKLIYSMQGHGDSVTGLSLSADGS 238
Query: 474 IIASASFDKSIKLWDGRI----GKFITTLRGHV----QAVYMVAWSSDSRLLVSGSADST 525
+ S S D S+++WD R + + +G+V + + +WS+D + +GSAD
Sbjct: 239 YLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRF 298
Query: 526 LKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
+ +W+ T++I LPGH V V + P+ V SG DK L
Sbjct: 299 VYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRL 341
Score = 226 (84.6 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 72/256 (28%), Positives = 124/256 (48%)
Query: 332 VRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRA-SDGVMCRTLEGHAHWVNTLALS 389
+ +L+ H V C ++ +G + S+ DR I +W D TL+GH+ V L +
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYN 108
Query: 390 TD-YLMRVEATSTGGFKYDPANPEESSK-HALAKYQAQC-P--EGEKLV-SGSDDFTLFL 443
TD L+ +T +D E + + C P G +L +GSDD T+ L
Sbjct: 109 TDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKL 168
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ K K S+ Q+++ V F+ I S D IK+WD R K I +++GH
Sbjct: 169 WDIRK-KASVHTFQNTYQVLS-VTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGD 226
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKT----KKIEQDLPG--HGDE--VYAVDWAPD 555
+V ++ S+D L+S S D++++VW+++ ++ + G H E + W+ D
Sbjct: 227 SVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSAD 286
Query: 556 GEKVASGGKDKVLRLW 571
G K+A+G D+ + +W
Sbjct: 287 GSKIAAGSADRFVYIW 302
Score = 174 (66.3 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 86/340 (25%), Positives = 136/340 (40%)
Query: 64 EITKTLAD--VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMP-----GHAEAVISV 116
E K +AD V+P+ + Q Q + + P + P GH V
Sbjct: 3 EPKKRVADMAVVPVGVKRPRTELVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVYCC 62
Query: 117 KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL---ADVLPLD 173
KF PNG +LAS D + W+V CE Y + L D L
Sbjct: 63 KFHPNGATLASSGYDRLILMWNVYGD-----CEN--YATLKGHSGAVMELHYNTDGSLLF 115
Query: 174 TLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA-SGSGDTTVR 232
+ +T++ V V+ + +V+ + GH V S + G LA +GS D TV+
Sbjct: 116 SASTDKTV-CVWDSETGERVK-------RLKGHTSFVNSCFPARRGPQLACTGSDDGTVK 167
Query: 233 FWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHK 292
WD+ + + + + + VL + ++ S Q++SG + I WD K I M+GH
Sbjct: 168 LWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLI-YSMQGHG 225
Query: 293 QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS--HTRSVTCIR--WG 348
+T LS +S + IR + +CV++ H +R W
Sbjct: 226 DSVTGLSLSADGSYLLSNSMDNSVRVWDIRPF-APKERCVKIFQGNVHNFEKNLLRCSWS 284
Query: 349 GSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLA 387
G I + S DR + +W + + L GHA VN +A
Sbjct: 285 ADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVA 324
Score = 164 (62.8 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 52/206 (25%), Positives = 94/206 (45%)
Query: 106 MPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
+ GH V S + G LA +GS D TV+ WD+ + + + T + V
Sbjct: 137 LKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNT---YQVLSVTFND 193
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
T ++ N +V D+ Q + ++ SM GH ++V + S +G L S
Sbjct: 194 TSDQIISGGIDNDIKVWDL-RQNKLIY----------SMQGHGDSVTGLSLSADGSYLLS 242
Query: 225 GSGDTTVRFWDVTTQTPLFKC----EGHKHW----VLCIAWSPDSKQLVSGCKNGVIHAW 276
S D +VR WD+ P +C +G+ H +L +WS D ++ +G + ++ W
Sbjct: 243 NSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIW 302
Query: 277 DSSTGKQIGQPMRGHKQWITALSWEP 302
D++T ++I + GH + +++ P
Sbjct: 303 DTTT-RRIVYKLPGHAGSVNEVAFHP 327
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 255 (94.8 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 85/300 (28%), Positives = 130/300 (43%)
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
G + +K +T+L W N A+ DG RIW L H +
Sbjct: 233 GHDVPSNKD-VTSLDW-----NSDGTLLATGSYDGFARIWTED-GNLASTLGQHKGPIFA 285
Query: 345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA------HWVN--TLA-LSTDYLM 394
++W G I SA D+T +W A G + H+ W N T A STD M
Sbjct: 286 LKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTD--M 343
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
+ G + P + + + + P G L S SDD TL +W+ K+ +
Sbjct: 344 CIHVCRLGCDR--PVKTFQGHTNEVNAIKWD-PSGMLLASCSDDMTLKIWSM-KQDTCVH 399
Query: 455 RMTGHQQLINCVEFSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ H + I +++SP G ++ASASFD +++LWD G + TL H + V
Sbjct: 400 DLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPV 459
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
Y VA+S D + L SGS D + +WN ++ + G G ++ V W G+KV + D
Sbjct: 460 YSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGG-IFEVCWNARGDKVGASASD 518
Score = 225 (84.3 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 64/265 (24%), Positives = 118/265 (44%)
Query: 326 VILSQCVRVLTSH----TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++L C+R H + VT + W G L+ + S D ++W DG + TL H
Sbjct: 223 LVLRHCIRE-GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQHK 280
Query: 381 HWVNTLALST--DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSG 435
+ L + +Y++ T +D E + H+ S
Sbjct: 281 GPIFALKWNKKGNYILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASC 339
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI 495
S D + + ++ + GH +N +++ P G ++AS S D ++K+W + +
Sbjct: 340 STDMCIHVCRLGCDRP-VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCV 398
Query: 496 TTLRGHVQAVYMVAWS---------SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
L+ H + +Y + WS + S +L S S DST+++W+++ L H +
Sbjct: 399 HDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEP 458
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
VY+V ++PDG+ +ASG DK + +W
Sbjct: 459 VYSVAFSPDGKYLASGSFDKCVHIW 483
Score = 165 (63.1 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 59/208 (28%), Positives = 85/208 (40%)
Query: 195 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV-------TTQTPLFKC-- 245
P ++ T + GH V ++P LASGSGD+T R W++ +TQ L C
Sbjct: 172 PPSKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 230
Query: 246 EG-H----KHWVLCIAWSPDSKQLVSGCKNGVIHAW--DSSTGKQIGQPMRGHKQWITAL 298
EG H V + W+ D L +G +G W D + +GQ HK I AL
Sbjct: 231 EGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQ----HKGPIFAL 286
Query: 299 SWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ 358
W N + S+G D IWD + + H+ + W + S S
Sbjct: 287 KW-----NKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCST 341
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTL 386
D I V R +T +GH + VN +
Sbjct: 342 DMCIHVCRLGCDRPVKTFQGHTNEVNAI 369
Score = 157 (60.3 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 43/181 (23%), Positives = 75/181 (41%)
Query: 204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ 263
P H+ + V + N + AS S D + + P+ +GH + V I W P S
Sbjct: 319 PFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGM 376
Query: 264 LVSGCKNGV-IHAWDSSTGKQIGQPMRGHKQWITALSWEPFH---LN-HQCRRFASSGKD 318
L++ C + + + W + ++ H + I + W P N + AS+ D
Sbjct: 377 LLASCSDDMTLKIWSMKQDTCV-HDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFD 435
Query: 319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLE 377
+R+WDV C+ LT H V + + G + S S D+ + +W G + +
Sbjct: 436 STVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYR 495
Query: 378 G 378
G
Sbjct: 496 G 496
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 57/229 (24%), Positives = 97/229 (42%)
Query: 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
P H+ + V + N + AS S D + + P+ +G + NE K
Sbjct: 319 PFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQG-----HTNEVNAIKWD 372
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----- 221
+ L + + + + I KQ C + H++ + ++K+SP G +
Sbjct: 373 PSGMLLASCSDDMTLKIWSMKQDT--------CVHDLQAHSKEIYTIKWSPTGPATSNPN 424
Query: 222 ----LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
LAS S D+TVR WDV L H+ V +A+SPD K L SG + +H W+
Sbjct: 425 SSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN 484
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ +G + RG I + W N + + +S DG++ + D+
Sbjct: 485 TQSGSLV-HSYRG-TGGIFEVCW-----NARGDKVGASASDGSVCVLDL 526
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEK---------KSLARMTGHQ----QLINCVEFSPDGR 473
P + L SGS D T +WN + + R GH + + ++++ DG
Sbjct: 193 PVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGT 252
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++A+ S+D ++W G +TL H ++ + W+ ++S D T +W+ T
Sbjct: 253 LLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT 311
Query: 534 KKIEQDLPGHGDEVYAVDW 552
+ +Q P H VDW
Sbjct: 312 GEAKQQFPFHSAPALDVDW 330
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/91 (36%), Positives = 47/91 (51%)
Query: 496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK------------IEQ---DL 540
T LRGH V++ AW+ S LL SGS DST ++WN+ I + D+
Sbjct: 177 TVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 236
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
P + D V ++DW DG +A+G D R+W
Sbjct: 237 PSNKD-VTSLDWNSDGTLLATGSYDGFARIW 266
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 42/179 (23%), Positives = 75/179 (41%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R + GH V ++K+ P+G LAS S D T++ W + T + + Y +
Sbjct: 354 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKW 413
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTR--CTSSMPGHAEAVISVKFSPN 218
T P + ++ + ++ V R C ++ H E V SV FSP+
Sbjct: 414 SPTG------PATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPD 467
Query: 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
G+ LASGS D V W+ + + + G + + W+ ++ + +G + D
Sbjct: 468 GKYLASGSFDKCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLD 525
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 57/273 (20%), Positives = 106/273 (38%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGTPYLFYVNETE 161
S++ H + ++K++ G + S D T WD T F P L + +
Sbjct: 274 STLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDV--DWQ 331
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
T A + +T+ + + + RPV + GH V ++K+ P+G
Sbjct: 332 NNTTFA------SCSTDMCIHVC----RLGCDRPV----KTFQGHTNEVNAIKWDPSGML 377
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP---------DSKQLVSGCKNGV 272
LAS S D T++ W + T + + H + I WSP S L S +
Sbjct: 378 LASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDST 437
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
+ WD G + + H++ + ++++ P + AS D + IW+ V
Sbjct: 438 VRLWDVERGVCL-HTLTKHQEPVYSVAFSP-----DGKYLASGSFDKCVHIWNTQSGSLV 491
Query: 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364
T + + W G + +++ D ++ V
Sbjct: 492 HSYRG-TGGIFEVCWNARGDKVGASASDGSVCV 523
Score = 74 (31.1 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 98 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
P ++ T + GH V ++P LASGSGD+T R W++
Sbjct: 172 PPSKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNL 212
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 256 (95.2 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 84/300 (28%), Positives = 129/300 (43%)
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
G + +K +T+L W N A+ DG RIW L H +
Sbjct: 274 GHDVPSNKD-VTSLDW-----NTNGTLLATGSYDGFARIWTED-GNLASTLGQHKGPIFA 326
Query: 345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA------HWVNTLAL---STDYLM 394
++W G I SA D+T +W A G + H+ W N + STD M
Sbjct: 327 LKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTD--M 384
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
+ G + P + + + + P G L S SDD TL +W+ K++ +
Sbjct: 385 CIHVCRLGCDR--PVKTFQGHTNEVNAIKWD-PSGMLLASCSDDMTLKIWSM-KQEVCIH 440
Query: 455 RMTGHQQLINCVEFSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ H + I +++SP G ++ASASFD +++LWD G TL H + V
Sbjct: 441 DLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPV 500
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
Y VA+S D R L SGS D + +WN ++ + G G ++ V W G+KV + D
Sbjct: 501 YSVAFSPDGRYLASGSFDKCVHIWNTQSGNLVHSYRGTGG-IFEVCWNARGDKVGASASD 559
Score = 226 (84.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 106/447 (23%), Positives = 188/447 (42%)
Query: 154 LFYVN-ETEITK--TLADVLPLDTLNTEEVV--DIVYQKQAVFQVRPVTRCTSSMPGHAE 208
L YV E I + T+ D P+++L+ + V D+V +Q F+ + + S+ A
Sbjct: 108 LQYVEAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQRAFREKLAQQQASAAAAAAA 167
Query: 209 AVISVKFS---PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
A S S P+ A+ +G+ R V + +G P SK V
Sbjct: 168 ATTSASVSQQNPSKNREATVNGEEN-RAHSVNNHAKPMEIDGEVD-------IPSSKATV 219
Query: 266 -SGCKNGV-IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRI 323
G ++ V I AW+ + + TA W +LN S+G G+ ++
Sbjct: 220 LRGHESEVFICAWNP-----VSDLLASGSGDSTARIW---NLNEN-----SNG--GSTQL 264
Query: 324 WDVILSQCVRVLTSH----TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEG 378
+L C+R H + VT + W +G L+ + S D ++W DG + TL
Sbjct: 265 ---VLRHCIRE-GGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIW-TEDGNLASTLGQ 319
Query: 379 HAHWVNTLALST--DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLV 433
H + L + +Y++ T +D E + H+
Sbjct: 320 HKGPIFALKWNRKGNYILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFA 378
Query: 434 SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK 493
S S D + + ++ + GH +N +++ P G ++AS S D ++K+W +
Sbjct: 379 SCSTDMCIHVCRLGCDRP-VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEV 437
Query: 494 FITTLRGHVQAVYMVAWS---------SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG 544
I L+ H + +Y + WS + + +L S S DST+++W+++ L H
Sbjct: 438 CIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQ 497
Query: 545 DEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ VY+V ++PDG +ASG DK + +W
Sbjct: 498 EPVYSVAFSPDGRYLASGSFDKCVHIW 524
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 55/229 (24%), Positives = 96/229 (41%)
Query: 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
P H+ + V + N + AS S D + + P+ +G + NE K
Sbjct: 360 PFHSAPALDVDWQ-NNMTFASCSTDMCIHVCRLGCDRPVKTFQG-----HTNEVNAIKWD 413
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----- 221
+ L + + + + I KQ V C + H + + ++K+SP G +
Sbjct: 414 PSGMLLASCSDDMTLKIWSMKQEV--------CIHDLQAHNKEIYTIKWSPTGPATSNPN 465
Query: 222 ----LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
LAS S D+TVR WD+ H+ V +A+SPD + L SG + +H W+
Sbjct: 466 SNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 525
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ +G + RG I + W N + + +S DG++ + D+
Sbjct: 526 TQSGNLV-HSYRG-TGGIFEVCW-----NARGDKVGASASDGSVCVLDL 567
Score = 139 (54.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 42/179 (23%), Positives = 76/179 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R + GH V ++K+ P+G LAS S D T++ W + + + + N+
Sbjct: 395 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAH------NKE 448
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTR--CTSSMPGHAEAVISVKFSPN 218
T + P + ++ + ++ + R CT ++ H E V SV FSP+
Sbjct: 449 IYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPD 508
Query: 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
GR LASGS D V W+ + + G + + W+ ++ + +G + D
Sbjct: 509 GRYLASGSFDKCVHIWNTQSGNLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLD 566
Score = 121 (47.7 bits), Expect = 0.00055, P = 0.00055
Identities = 56/273 (20%), Positives = 104/273 (38%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGTPYLFYVNETE 161
S++ H + ++K++ G + S D T WD T F P L + +
Sbjct: 315 STLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDV--DWQ 372
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
T A + +T+ + + + RPV + GH V ++K+ P+G
Sbjct: 373 NNMTFA------SCSTDMCIHVC----RLGCDRPV----KTFQGHTNEVNAIKWDPSGML 418
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK---------QLVSGCKNGV 272
LAS S D T++ W + + + + H + I WSP L S +
Sbjct: 419 LASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDST 478
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
+ WD G + H++ + ++++ P R AS D + IW+ V
Sbjct: 479 VRLWDIERGV-CTHTLTKHQEPVYSVAFSP-----DGRYLASGSFDKCVHIWNTQSGNLV 532
Query: 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364
T + + W G + +++ D ++ V
Sbjct: 533 HSYRG-TGGIFEVCWNARGDKVGASASDGSVCV 564
Score = 74 (31.1 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 98 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
P ++ T + GH V ++P LASGSGD+T R W++
Sbjct: 213 PSSKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNL 253
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 254 (94.5 bits), Expect = 8.1e-22, Sum P(2) = 8.1e-22
Identities = 86/300 (28%), Positives = 130/300 (43%)
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
G + +K +T+L W N A+ DG RIW L H +
Sbjct: 228 GHDVPSNKD-VTSLDW-----NSDGTLLATGSYDGFARIWTED-GNLASTLGQHKGPIFA 280
Query: 345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA------HWVN--TLA-LSTDYLM 394
++W G I SA D+T +W A G + H+ W N T A STD M
Sbjct: 281 LKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTD--M 338
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
+ G + P + + + + P G L S SDD TL +W+ K+ +
Sbjct: 339 CIHVCRLGCDR--PVKTFQGHTNEVNAIKWD-PSGMLLASCSDDMTLKIWSM-KQDTCVH 394
Query: 455 RMTGHQQLINCVEFSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ H + I +++SP G ++ASASFD +++LWD G I TL H + V
Sbjct: 395 DLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPV 454
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
Y VA+S D + L SGS D + +WN ++ + G G ++ V W G+KV + D
Sbjct: 455 YSVAFSPDGKYLASGSFDKCVHIWNTQSGTLVHSYRGTGG-IFEVCWNARGDKVGASASD 513
Score = 220 (82.5 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 63/265 (23%), Positives = 117/265 (44%)
Query: 326 VILSQCVRVLTSH----TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++L C+R H + VT + W G L+ + S D ++W DG + TL H
Sbjct: 218 LVLRHCIRE-GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQHK 275
Query: 381 HWVNTLALST--DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSG 435
+ L + +Y++ T +D E + H+ S
Sbjct: 276 GPIFALKWNKKGNYILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASC 334
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI 495
S D + + ++ + GH +N +++ P G ++AS S D ++K+W + +
Sbjct: 335 STDMCIHVCRLGCDRP-VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCV 393
Query: 496 TTLRGHVQAVYMVAWS---------SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
L+ H + +Y + WS + + +L S S DST+++W++ L H +
Sbjct: 394 HDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEP 453
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
VY+V ++PDG+ +ASG DK + +W
Sbjct: 454 VYSVAFSPDGKYLASGSFDKCVHIW 478
Score = 164 (62.8 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 59/208 (28%), Positives = 84/208 (40%)
Query: 195 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV-------TTQTPLFKC-- 245
P + T + GH V ++P LASGSGD+T R W++ +TQ L C
Sbjct: 167 PPNKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIR 225
Query: 246 EG-H----KHWVLCIAWSPDSKQLVSGCKNGVIHAW--DSSTGKQIGQPMRGHKQWITAL 298
EG H V + W+ D L +G +G W D + +GQ HK I AL
Sbjct: 226 EGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQ----HKGPIFAL 281
Query: 299 SWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ 358
W N + S+G D IWD + + H+ + W + S S
Sbjct: 282 KW-----NKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCST 336
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTL 386
D I V R +T +GH + VN +
Sbjct: 337 DMCIHVCRLGCDRPVKTFQGHTNEVNAI 364
Score = 161 (61.7 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 43/181 (23%), Positives = 74/181 (40%)
Query: 204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ 263
P H+ + V + N + AS S D + + P+ +GH + V I W P S
Sbjct: 314 PFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGM 371
Query: 264 LVSGCKNGV-IHAWDSSTGKQIGQPMRGHKQWITALSWEPFH---LNHQCR-RFASSGKD 318
L++ C + + + W + ++ H + I + W P N AS+ D
Sbjct: 372 LLASCSDDMTLKIWSMKQDTCV-HDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFD 430
Query: 319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLE 377
+R+WDV C+ LT H V + + G + S S D+ + +W G + +
Sbjct: 431 STVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGTLVHSYR 490
Query: 378 G 378
G
Sbjct: 491 G 491
Score = 150 (57.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 56/229 (24%), Positives = 96/229 (41%)
Query: 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
P H+ + V + N + AS S D + + P+ +G + NE K
Sbjct: 314 PFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQG-----HTNEVNAIKWD 367
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----- 221
+ L + + + + I KQ C + H++ + ++K+SP G
Sbjct: 368 PSGMLLASCSDDMTLKIWSMKQDT--------CVHDLQAHSKEIYTIKWSPTGPGTSNPN 419
Query: 222 ----LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
LAS S D+TVR WDV + H+ V +A+SPD K L SG + +H W+
Sbjct: 420 SNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN 479
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ +G + RG I + W N + + +S DG++ + D+
Sbjct: 480 TQSGTLV-HSYRG-TGGIFEVCW-----NARGDKVGASASDGSVCVLDL 521
Score = 146 (56.5 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 35/139 (25%), Positives = 61/139 (43%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKS---------LARMTGHQ----QLINCVEFSPDGR 473
P + L SGS D T +WN + S R GH + + ++++ DG
Sbjct: 188 PVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGT 247
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++A+ S+D ++W G +TL H ++ + W+ ++S D T +W+ T
Sbjct: 248 LLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT 306
Query: 534 KKIEQDLPGHGDEVYAVDW 552
+ +Q P H VDW
Sbjct: 307 GEAKQQFPFHSAPALDVDW 325
Score = 137 (53.3 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 45/180 (25%), Positives = 76/180 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R + GH V ++K+ P+G LAS S D T++ W + T + + Y +
Sbjct: 349 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKW 408
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQK-QAVFQVRPVTR--CTSSMPGHAEAVISVKFSP 217
T P T N + + + ++ V R C ++ H E V SV FSP
Sbjct: 409 SPTG------P-GTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSP 461
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+G+ LASGS D V W+ + T + G + + W+ ++ + +G + D
Sbjct: 462 DGKYLASGSFDKCVHIWNTQSGTLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLD 520
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/91 (36%), Positives = 47/91 (51%)
Query: 496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK------------IEQ---DL 540
T LRGH V++ AW+ S LL SGS DST ++WN+ I + D+
Sbjct: 172 TVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDV 231
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
P + D V ++DW DG +A+G D R+W
Sbjct: 232 PSNKD-VTSLDWNSDGTLLATGSYDGFARIW 261
Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
Identities = 57/273 (20%), Positives = 105/273 (38%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGTPYLFYVNETE 161
S++ H + ++K++ G + S D T WD T F P L + +
Sbjct: 269 STLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDV--DWQ 326
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
T A + +T+ + + + RPV + GH V ++K+ P+G
Sbjct: 327 NNTTFA------SCSTDMCIHVC----RLGCDRPV----KTFQGHTNEVNAIKWDPSGML 372
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK---------QLVSGCKNGV 272
LAS S D T++ W + T + + H + I WSP L S +
Sbjct: 373 LASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDST 432
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
+ WD G I + H++ + ++++ P + AS D + IW+ V
Sbjct: 433 VRLWDVDRGVCI-HTLTKHQEPVYSVAFSP-----DGKYLASGSFDKCVHIWNTQSGTLV 486
Query: 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364
T + + W G + +++ D ++ V
Sbjct: 487 HSYRG-TGGIFEVCWNARGDKVGASASDGSVCV 518
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 34/130 (26%), Positives = 58/130 (44%)
Query: 456 MTGHQQLINCVEFSPDGRIIASASFDKSIKLWD----GRIGKFITTLR------GH-VQA 504
+ GH+ + ++P ++AS S D + ++W+ G LR GH V +
Sbjct: 174 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVPS 233
Query: 505 ---VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS 561
V + W+SD LL +GS D ++W + + L H ++A+ W G + S
Sbjct: 234 NKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILS 292
Query: 562 GGKDKVLRLW 571
G DK +W
Sbjct: 293 AGVDKTTIIW 302
Score = 73 (30.8 bits), Expect = 8.1e-22, Sum P(2) = 8.1e-22
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 98 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
P + T + GH V ++P LASGSGD+T R W++
Sbjct: 167 PPNKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNL 207
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 281 (104.0 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 86/307 (28%), Positives = 142/307 (46%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH V +V+FSP+ +ASG D V+ W +T ++ EGH + I+WSPD +
Sbjct: 174 GHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATI 233
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
SG + I W+ TGK P GH ++ A+++ P + S D A+ +W
Sbjct: 234 ASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSP-----KGNMLVSGSYDEAVFLW 288
Query: 325 DVILSQCVRVLTSHTRSVTCIR--WGGSGLIYSASQDRTIKVWRASDGVMCRTL--EGHA 380
DV ++ ++ L +H+ V+ I W G+ LI S + D +++W S G RTL E +
Sbjct: 289 DVRSARVMKSLPAHSDPVSGIDVVWDGT-LIASCATDGLVRIWDTSTGQCLRTLVHEDNP 347
Query: 381 ---------HWVNTLALSTDYLMR----VEATSTGGFKYDPANPEESSKHALAKYQAQCP 427
+ LA + D +R VE ++ +N + S A Y P
Sbjct: 348 PVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQ-GHSNKKYSLSGAFGVYGQSIP 406
Query: 428 ---EGEKL-VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF--SPDGRIIASASFD 481
G VSGS+D + W+ KK L R+ H ++ V+ + +GR + S D
Sbjct: 407 GRTPGYAFAVSGSEDGAILCWDVVT-KKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLD 465
Query: 482 KSIKLWD 488
++++W+
Sbjct: 466 GTVRVWE 472
Score = 241 (89.9 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 78/306 (25%), Positives = 133/306 (43%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+RGH + ++A+ + P AS G DGA+++W + + H ++ I W
Sbjct: 172 LRGHLRGVSAVRFSP-----DASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISW 226
Query: 348 GGSGL-IYSASQDRTIKVWRASDGVMCRT-LEGHAHWVNTLALSTDYLMRVEAT-STGGF 404
G I S S D+TI++W G T GH ++V +A S M V + F
Sbjct: 227 SPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVF 286
Query: 405 KYD--PANPEES-SKHALAKYQAQCP-EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ 460
+D A +S H+ +G + S + D + +W+ + +
Sbjct: 287 LWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDN 346
Query: 461 QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW-------SSD 513
++ V+FSP+G+ + + + D ++LWD G+ + T +GH Y ++ S
Sbjct: 347 PPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIP 406
Query: 514 SR-----LLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK--VASGGKDK 566
R VSGS D + W++ TKK+ Q + H V VD GE + S G D
Sbjct: 407 GRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDG 466
Query: 567 VLRLWQ 572
+R+W+
Sbjct: 467 TVRVWE 472
Score = 212 (79.7 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 83/313 (26%), Positives = 129/313 (41%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
F GH V + +SPD+ + SG +G + W +STGK I GH I+ +SW P
Sbjct: 170 FLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLI-YTFEGHLAGISTISWSP 228
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRV-LTSHTRSVTCIRWGGSG-LIYSASQDR 360
AS D IR+W+V+ + H V I + G ++ S S D
Sbjct: 229 -----DGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDE 283
Query: 361 TIKVWRASDGVMCRTLEGHAH--------WVNTLALS--TDYLMRVEATSTGGFKYDPAN 410
+ +W + ++L H+ W TL S TD L+R+ TSTG +
Sbjct: 284 AVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVH 343
Query: 411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE--F 468
E++ + K+ P G+ +++ + D + LW+ E + L GH + F
Sbjct: 344 -EDNPPVSSVKFS---PNGKYVLAWTLDDCVRLWD-YVEGRCLKTYQGHSNKKYSLSGAF 398
Query: 469 SPDGRII----------ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS--DSRL 516
G+ I S S D +I WD K + + H V V S + R
Sbjct: 399 GVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRF 458
Query: 517 LVSGSADSTLKVW 529
+VS D T++VW
Sbjct: 459 MVSCGLDGTVRVW 471
Score = 206 (77.6 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 76/273 (27%), Positives = 132/273 (48%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH + ++ +SP+G ++ASGS D T+R W+V T K TP++ + N +A
Sbjct: 216 GHLAGISTISWSPDGATIASGSDDKTIRLWNVLTG----KAHPTPFIGHHN---YVYAIA 268
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVF--QVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG 225
P + +V Y +AVF VR R S+P H++ V + +G +AS
Sbjct: 269 -FSPKGNM----LVSGSYD-EAVFLWDVRSA-RVMKSLPAHSDPVSGIDVVWDGTLIASC 321
Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHW--VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
+ D VR WD +T L + H+ V + +SP+ K +++ + + WD G+
Sbjct: 322 ATDGLVRIWDTSTGQCL-RTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRC 380
Query: 284 IGQPMRGH--KQWITALSWEPFHLNHQCRR----FASSG-KDGAIRIWDVILSQCVRVLT 336
+ + +GH K++ + ++ + + R FA SG +DGAI WDV+ + ++ +
Sbjct: 381 L-KTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIE 439
Query: 337 SHTRSV----TCIRWGGSGLIYSASQDRTIKVW 365
+H V TC G ++ S D T++VW
Sbjct: 440 AHDGVVLGVDTCSTGEGRFMV-SCGLDGTVRVW 471
Score = 160 (61.4 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 48/177 (27%), Positives = 78/177 (44%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH V +V+FSP+ +ASG D V+ W +T ++ EG +L ++ + A
Sbjct: 174 GHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEG--HLAGISTISWSPDGA 231
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
+ T + +++ K P + GH V ++ FSP G L SGS
Sbjct: 232 TIASGSDDKTIRLWNVLTGK-----AHP-----TPFIGHHNYVYAIAFSPKGNMLVSGSY 281
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWV--LCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
D V WDV + + H V + + W D + S +G++ WD+STG+
Sbjct: 282 DEAVFLWDVRSARVMKSLPAHSDPVSGIDVVW--DGTLIASCATDGLVRIWDTSTGQ 336
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 63/234 (26%), Positives = 100/234 (42%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH V ++ FSP G L SGS D V WDV + + + P + ++
Sbjct: 259 GHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVM---KSLP----AHSDPVSGI-- 309
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAE--AVISVKFSPNGRSLASG 225
DV+ TL D + + ++ +C ++ H + V SVKFSPNG+ + +
Sbjct: 310 DVVWDGTLIASCATDGLVR---IWDTS-TGQCLRTLV-HEDNPPVSSVKFSPNGKYVLAW 364
Query: 226 SGDTTVRFWDVTTQTPLFKCEGH--KHWVLCIAW----------SPDSKQLVSGCKNGVI 273
+ D VR WD L +GH K + L A+ +P VSG ++G I
Sbjct: 365 TLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAI 424
Query: 274 HAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI 327
WD T K++ Q + H + + + R S G DG +R+W+ +
Sbjct: 425 LCWDVVT-KKVLQRIEAHDGVVLGVDTCS---TGEGRFMVSCGLDGTVRVWEEV 474
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 261 (96.9 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 95/346 (27%), Positives = 150/346 (43%)
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC---EGHKHWVLCIAWSP 259
M GH + V SV +SPNG LAS GD T+R W + K +GH+ + + WSP
Sbjct: 1 MTGHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSP 60
Query: 260 DSKQLVSGCKNGVIHAWDSSTGK-QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD 318
L S + WD +G+ + + GH+ + ++ W A+ G+D
Sbjct: 61 CGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSV-----SGSLLATCGRD 115
Query: 319 GAIRIWDVILS---QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRAS--DGVM 372
++ IW+V +C V+ SHT+ V + W + ++ S S D TIK+++ D
Sbjct: 116 KSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYKEDEDDWSC 175
Query: 373 CRTLEGHAHWVNTLAL--STDYLMRVEATSTGGF--KYDPANPEE---SSKHALAKYQAQ 425
C TLEGH V +++ S D ++ T Y P N E S KH K++
Sbjct: 176 CDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKHT--KWKCV 233
Query: 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE-FSPDGRIIASASFDKSI 484
C ++SG D T++ + K +A +G +C+ F D S S
Sbjct: 234 C-----VLSGYHDRTIYDVHWSKVSGLIATASGD----DCIRIFKEDTN---SDRNQPSF 281
Query: 485 KLWDGRIGKFITTLRGHVQAVYMVAWS-SDSRLLVSGSADSTLKVW 529
+L T + H V + W D +L + S D T+K+W
Sbjct: 282 QL-------VATQRKAHSMDVNSICWHPKDENILATCSDDGTVKLW 320
Score = 190 (71.9 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 50/157 (31%), Positives = 77/157 (49%)
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEK---KSLARMTGHQQLINCVEFSPDGRIIASASF 480
A P G L S D T+ +W E +K K++ GHQ+ I + +SP G +ASASF
Sbjct: 12 AWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILE-DGHQRTIRSLGWSPCGTFLASASF 70
Query: 481 DKSIKLWDGRIGKFI--TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK---K 535
D + +WD + G+F TL GH V V WS LL + D ++ +W ++ +
Sbjct: 71 DATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQEDDEYE 130
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
+ H +V V W P E +AS D ++L++
Sbjct: 131 CASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYK 167
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 78/291 (26%), Positives = 127/291 (43%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFY-VNETEITK 164
M GH + V SV +SPNG LAS GD T+R W EG ++ + E +
Sbjct: 1 MTGHEDRVWSVAWSPNGFVLASCGGDKTIRIWGK---------EGDKWICKTILEDGHQR 51
Query: 165 TLADV--LPLDTLNTEEVVD----IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN 218
T+ + P T D I QK F+ C +++ GH V SV +S +
Sbjct: 52 TIRSLGWSPCGTFLASASFDATTCIWDQKSGEFE------CNATLEGHENEVKSVDWSVS 105
Query: 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEG--HKHW--VLCIAWSPDSKQLVSGCK-NGVI 273
G LA+ D +V W+V ++C H H V + W P +K++++ C + I
Sbjct: 106 GSLLATCGRDKSVWIWEVQEDDE-YECASVIHSHTQDVKKVVWHP-TKEILASCSYDDTI 163
Query: 274 HAW-DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD------- 325
+ + + GH+ + ++S++ R S D +RIW
Sbjct: 164 KLYKEDEDDWSCCDTLEGHESTVWSISFDG-----SGDRIVSCSDDKTVRIWKSYPPGNQ 218
Query: 326 --VILS------QCVRVLTS-HTRSVTCIRWGG-SGLIYSASQDRTIKVWR 366
V++S +CV VL+ H R++ + W SGLI +AS D I++++
Sbjct: 219 EGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSKVSGLIATASGDDCIRIFK 269
Score = 175 (66.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 44/157 (28%), Positives = 79/157 (50%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEK-EKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIK 485
P G L S S D T +W+ + E + A + GH+ + V++S G ++A+ DKS+
Sbjct: 60 PCGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVW 119
Query: 486 LWDGRIG---KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD--- 539
+W+ + + + + H Q V V W +L S S D T+K++ K+ E D
Sbjct: 120 IWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLY----KEDEDDWSC 175
Query: 540 ---LPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
L GH V+++ + G+++ S DK +R+W++
Sbjct: 176 CDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIWKS 212
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 51/249 (20%), Positives = 98/249 (39%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C +++ GH V SV +S +G LA+ D +V W+V ++C + + + +
Sbjct: 86 CNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQEDDE-YECAS---VIHSHTQD 141
Query: 162 ITKTLADVLP--LDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNG 219
+ K + L + + ++ + + + + + C ++ GH V S+ F +G
Sbjct: 142 VKKVVWHPTKEILASCSYDDTIKLYKEDEDDWS------CCDTLEGHESTVWSISFDGSG 195
Query: 220 RSLASGSGDTTVRFWD-----------VTTQTPLFKC----EG-HKHWVLCIAWSPDSKQ 263
+ S S D TVR W V+ + +KC G H + + WS S
Sbjct: 196 DRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSKVSGL 255
Query: 264 LVSGCKNGVIHAWDSSTGKQIGQPM--------RGHKQWITALSWEPFHLNHQCRRFASS 315
+ + + I + T QP + H + ++ W P N A+
Sbjct: 256 IATASGDDCIRIFKEDTNSDRNQPSFQLVATQRKAHSMDVNSICWHPKDENI----LATC 311
Query: 316 GKDGAIRIW 324
DG +++W
Sbjct: 312 SDDGTVKLW 320
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 174 (66.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 46/159 (28%), Positives = 75/159 (47%)
Query: 428 EGEKLVSGSDDFTLFLWN--------PEKEKKSLARMTGHQQL-------INCVEFSPDG 472
+G++LV+GS D T+ W+ P + K L + H I CV SPD
Sbjct: 484 DGKRLVTGSADKTVKFWDFKVENSLVPGTKNKFLPVLKLHHDTTLELTDDILCVRVSPDD 543
Query: 473 RIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
R +A + D ++K++ KF +L GH V + S DS+++++ SAD +K+W +
Sbjct: 544 RYLAISLLDNTVKVFFLDSMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIKIWGLD 603
Query: 533 TKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ L H D + V + P S KD V++ W
Sbjct: 604 FGDCHKSLFAHQDSIMNVKFLPQSHNFFSCSKDAVVKYW 642
Score = 174 (66.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 79/346 (22%), Positives = 141/346 (40%)
Query: 63 TEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNG 122
T ++ + +++ + NT E I Y+K+ P+ T + G V S+ S +
Sbjct: 344 TTVSSSKLELVLTTSSNTIEYYSIPYEKRDPTSPAPLKTHTIELQGQRTDVRSIDISDDN 403
Query: 123 RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD 182
+ LA+ S + ++ W++ T KC T F K L L L L T
Sbjct: 404 KLLATASNGS-LKIWNIKTH----KCIRT---FECGYALTCKFLPGGL-LVILGTRN--- 451
Query: 183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 242
+ +F + + + H A+ S+ + +G+ L +GS D TV+FWD + L
Sbjct: 452 ---GELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTVKFWDFKVENSL 508
Query: 243 FKCEGHK-------HW---------VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ 286
+K H +LC+ SPD + L + + + + K
Sbjct: 509 VPGTKNKFLPVLKLHHDTTLELTDDILCVRVSPDDRYLAISLLDNTVKVFFLDSMK-FYL 567
Query: 287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
+ GHK + LS + ++ + +S D I+IW + C + L +H S+ ++
Sbjct: 568 SLYGHK--LPVLSID---ISFDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMNVK 622
Query: 347 W-GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+ S +S S+D +K W + L H V LA++TD
Sbjct: 623 FLPQSHNFFSCSKDAVVKYWDGEKFECIQKLYAHQSEVWALAVATD 668
Score = 166 (63.5 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 45/152 (29%), Positives = 71/152 (46%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
LA G D ++ WD+ ++T L GHK + + + +L+SG K+ I WD G
Sbjct: 94 LAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWDL-VG 152
Query: 282 KQIG-QPMRGHKQWITALSWEPFHLNHQCRR---FASSGKDGAIRIWDVILSQCVRVLTS 337
++G +R HK IT W C+ S+ KDG I++WD+ QC+ +
Sbjct: 153 -EVGLYKLRSHKDSITGF-W--------CQGEDWLISTSKDGMIKLWDLKTHQCIETHIA 202
Query: 338 HTRSVTCIRWG---GSGLIYSASQDRTIKVWR 366
HT C WG L+ + D +K+W+
Sbjct: 203 HTGE--C--WGLAVKDDLLITTGTDSQVKIWK 230
Score = 151 (58.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 57/235 (24%), Positives = 97/235 (41%)
Query: 210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
++ V+ SP+ R LA D TV+ + + + GHK VL I S DSK +++
Sbjct: 534 ILCVRVSPDDRYLAISLLDNTVKVFFLDSMKFYLSLYGHKLPVLSIDISFDSKMIITSSA 593
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS 329
+ I W G + + H+ I + + P Q F S KD ++ WD
Sbjct: 594 DKNIKIWGLDFG-DCHKSLFAHQDSIMNVKFLP-----QSHNFFSCSKDAVVKYWDGEKF 647
Query: 330 QCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRAS-DGVMC---RTLEGHAHWVN 384
+C++ L +H V + G + S+S D +I++W + D V + E + +
Sbjct: 648 ECIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIWEETEDQVFLEEEKEKELEEQYED 707
Query: 385 TLALSTDYLMRVEATSTGGFKYDPANP--EESSKHALAKYQAQCPEGEKLVSGSD 437
TL S + E FK D + E+ + + GE+L+ D
Sbjct: 708 TLLTSLE-----EGNGDDAFKADASGEGVEDEASGVHKQTLESLKAGERLMEALD 757
Score = 149 (57.5 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 35/115 (30%), Positives = 59/115 (51%)
Query: 458 GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLL 517
GH+ + ++ S D ++I ++S DK+IK+W G +L H ++ V + S
Sbjct: 571 GHKLPVLSIDISFDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMNVKFLPQSHNF 630
Query: 518 VSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
S S D+ +K W+ + + Q L H EV+A+ A DG V S D +R+W+
Sbjct: 631 FSCSKDAVVKYWDGEKFECIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIWE 685
Score = 141 (54.7 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 41/166 (24%), Positives = 74/166 (44%)
Query: 409 ANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
A+ +K A Y + + L G D + +W+ K L GH+ I ++F
Sbjct: 71 ASDARGAKPAECTYLEAHKDTDLLAVGYADGVIKVWDL-MSKTVLLNFNGHKAAITLLQF 129
Query: 469 SPDGRIIASASFDKSIKLWD--GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTL 526
G + S S D +I +WD G +G + LR H ++ W L+S S D +
Sbjct: 130 DGTGTRLISGSKDSNIIVWDLVGEVGLY--KLRSHKDSITGF-WCQGEDWLISTSKDGMI 186
Query: 527 KVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
K+W++KT + + H E + + A + + + G D +++W+
Sbjct: 187 KLWDLKTHQCIETHIAHTGECWGL--AVKDDLLITTGTDSQVKIWK 230
Score = 137 (53.3 bits), Expect = 7.1e-08, Sum P(3) = 7.1e-08
Identities = 69/348 (19%), Positives = 142/348 (40%)
Query: 160 TEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNG 219
T ++ + +++ + NT E I Y+K+ P+ T + G V S+ S +
Sbjct: 344 TTVSSSKLELVLTTSSNTIEYYSIPYEKRDPTSPAPLKTHTIELQGQRTDVRSIDISDDN 403
Query: 220 RSLASGSGDTTVRFWDVTTQTPL--FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+ LA+ S + ++ W++ T + F+C G+ L + P ++ G +NG + +D
Sbjct: 404 KLLATASNGS-LKIWNIKTHKCIRTFEC-GY---ALTCKFLPGGLLVILGTRNGELQLFD 458
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL----SQCVR 333
++ + H I +L + K ++ + ++ ++ +
Sbjct: 459 LASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTVKFWDFKVENSLVPGTKNKFLP 518
Query: 334 VLTSH-------TRSVTCIRWGGSGLIYSASQ-DRTIKVWRASDGVMCRTLEGHAHWVNT 385
VL H T + C+R + S D T+KV+ +L GH V +
Sbjct: 519 VLKLHHDTTLELTDDILCVRVSPDDRYLAISLLDNTVKVFFLDSMKFYLSLYGHKLPVLS 578
Query: 386 LALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC-----PEGEKLVSGSDDFT 440
+ +S D M + +++ K + + K A + P+ S S D
Sbjct: 579 IDISFDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMNVKFLPQSHNFFSCSKDAV 638
Query: 441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+ W+ EK + + ++ HQ + + + DG + S+S D SI++W+
Sbjct: 639 VKYWDGEKFE-CIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIWE 685
Score = 136 (52.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 72/297 (24%), Positives = 127/297 (42%)
Query: 260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG 319
D+ L G +GVI WD + K + GHK IT L ++ R S KD
Sbjct: 90 DTDLLAVGYADGVIKVWDLMS-KTVLLNFNGHKAAITLLQFDGTGT-----RLISGSKDS 143
Query: 320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
I +WD++ + L SH S+T G + S S+D IK+W T H
Sbjct: 144 NIIVWDLVGEVGLYKLRSHKDSITGFWCQGEDWLISTSKDGMIKLWDLKTHQCIETHIAH 203
Query: 380 AHWVNTLALSTDYLMRVEATSTGG-FKYDPANPEESSKHA-LAKYQAQCPE-GEKL--VS 434
LA+ D L+ S +K D N + K + ++ Q + G K+ ++
Sbjct: 204 TGECWGLAVKDDLLITTGTDSQVKIWKLDIENDKMGGKLTEMGIFEKQSKQRGLKIEFIT 263
Query: 435 GSDDFTLFLW--NPEKEKKSLARMTGHQQLINCVEFSPDGRI----IASASFDKSIK-LW 487
S D T F + N +K ++ R+ +++ ++ + R+ + KSIK +
Sbjct: 264 NSSDKTSFFYIQNADKTIETF-RIRKEEEIARGLK-KREKRLKEKGLTEEEIAKSIKESY 321
Query: 488 DGRIGKFITTLRGHVQAVYMVAWS--SDSRL-LVSGSADSTLKVWNMKTKKIEQDLP 541
I T+R + + +W+ S S+L LV ++ +T++ +++ +K + P
Sbjct: 322 SSFILHPFQTIRS-LYKIKSASWTTVSSSKLELVLTTSSNTIEYYSIPYEKRDPTSP 377
Score = 125 (49.1 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 54/213 (25%), Positives = 89/213 (41%)
Query: 121 NGRSLASGSGD--TT----VRFWDVTTQTPLFKC-EGTPYLFYVNETEITKTLADVLPLD 173
+G S SG G T+ V WD+ T + K +G P ++ K A+ L+
Sbjct: 30 SGNSNGSGPGQLITSALEDVNIWDIKTGDLVSKLSDGLPP--GASDARGAKP-AECTYLE 86
Query: 174 TLNTEEVVDIVYQKQAVFQVRPVTRCTS--SMPGHAEAVISVKFSPNGRSLASGSGDTTV 231
+++ + Y V +V + T + GH A+ ++F G L SGS D+ +
Sbjct: 87 AHKDTDLLAVGYA-DGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNI 145
Query: 232 RFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGH 291
WD+ + L+K HK + W L+S K+G+I WD T + I + H
Sbjct: 146 IVWDLVGEVGLYKLRSHKDSITGF-WCQGEDWLISTSKDGMIKLWDLKTHQCIETHI-AH 203
Query: 292 KQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
T W L + ++G D ++IW
Sbjct: 204 ----TGECWG---LAVKDDLLITTGTDSQVKIW 229
Score = 121 (47.7 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 39/148 (26%), Positives = 71/148 (47%)
Query: 405 KYDPANPEESSKHALAKYQAQ--------CPEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
K DP +P H + + Q Q + KL++ + + +L +WN + K
Sbjct: 371 KRDPTSPAPLKTHTI-ELQGQRTDVRSIDISDDNKLLATASNGSLKIWNIKTHKCIRTFE 429
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR-GHVQAVYMVAWSSDSR 515
G+ + C +F P G ++ + + ++L+D + T+ H A++ + +SD +
Sbjct: 430 CGYA--LTC-KFLPGGLLVILGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGK 486
Query: 516 LLVSGSADSTLKVWNMKTKKIEQDL-PG 542
LV+GSAD T+K W+ K +E L PG
Sbjct: 487 RLVTGSADKTVKFWDFK---VENSLVPG 511
Score = 114 (45.2 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 26/129 (20%), Positives = 65/129 (50%)
Query: 445 NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR-GHVQ 503
+P K + G + + ++ S D +++A+AS + S+K+W+ + K I T G+
Sbjct: 376 SPAPLKTHTIELQGQRTDVRSIDISDDNKLLATAS-NGSLKIWNIKTHKCIRTFECGYAL 434
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP-GHGDEVYAVDWAPDGEKVASG 562
+ L++ G+ + L+++++ + + + H ++++D DG+++ +G
Sbjct: 435 TCKFLP---GGLLVILGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTG 491
Query: 563 GKDKVLRLW 571
DK ++ W
Sbjct: 492 SADKTVKFW 500
Score = 99 (39.9 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C S+ H +++++VKF P + S S D V++WD + K H+ V +A +
Sbjct: 607 CHKSLFAHQDSIMNVKFLPQSHNFFSCSKDAVVKYWDGEKFECIQKLYAHQSEVWALAVA 666
Query: 259 PDSKQLVSGCKNGVIHAWDSS 279
D +VS + I W+ +
Sbjct: 667 TDGGFVVSSSHDHSIRIWEET 687
Score = 75 (31.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK 147
GH A+ ++F G L SGS D+ + WD+ + L+K
Sbjct: 119 GHKAAITLLQFDGTGTRLISGSKDSNIIVWDLVGEVGLYK 158
Score = 40 (19.1 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 542 GHGDEVYAVDWAPDG-EKVASG 562
G+GD+ + D + +G E ASG
Sbjct: 716 GNGDDAFKADASGEGVEDEASG 737
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 279 (103.3 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 80/287 (27%), Positives = 135/287 (47%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH + + F+PN + LA+GS D ++ W++ + F+ +V T++ T
Sbjct: 16 GHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFR--------FVGHTDVI-TGV 66
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSM-PGHAEAVISVKFSPNGRSLASGS 226
+ P +L D Q V P + S++ H +V SV FS +G+ L + S
Sbjct: 67 NFAPSGSLVASSSRD-----QTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTAS 121
Query: 227 GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG-VIHAWDSSTGKQIG 285
D +V+ W V + L+ H +WV C +SPD + L++ C + + WD+S+ + I
Sbjct: 122 DDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGR-LIASCGDDRTVRLWDTSSHQCIN 180
Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI 345
+ + ++ F+ + C ASSG D I+IWD+ ++ ++ H V C
Sbjct: 181 I----FTDYGGSATFVDFNSSGTC--IASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCF 234
Query: 346 RWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+ SG + S S D TIK+ +G + TL GH V T+ S D
Sbjct: 235 SFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRD 281
Score = 273 (101.2 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 77/291 (26%), Positives = 137/291 (47%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
+GHK I+ + P N+ ++ A+ D ++ IW++ HT +T + +
Sbjct: 15 KGHKDVISCADFNP---NN--KQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFA 69
Query: 349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
SG L+ S+S+D+T+++W S + H V ++ S D V A+ K
Sbjct: 70 PSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVW 129
Query: 408 PANPEESSKHALAKYQ--AQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
+ ++L ++ +C P+G + S DD T+ LW+ + + T +
Sbjct: 130 GVE-RKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQ-CINIFTDYGG 187
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
V+F+ G IAS+ D +IK+WD R K I + H V ++ L+SGS
Sbjct: 188 SATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGS 247
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
+DST+K+ ++ ++ L GH V V ++ DG+ ASGG D + +W+
Sbjct: 248 SDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWK 298
Score = 269 (99.8 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 81/310 (26%), Positives = 133/310 (42%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL 305
+GHK + C ++P++KQL +G + + W+ + K GH IT +++ P
Sbjct: 15 KGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAP-KARAFRFVGHTDVITGVNFAP--- 70
Query: 306 NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKV 364
ASS +D +R+W + V +HT SV + + G + +AS D+++KV
Sbjct: 71 --SGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKV 128
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE----ESSKHAL 419
W +L H +WV S D + + +D ++ + +
Sbjct: 129 WGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGS 188
Query: 420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + G + S D T+ +W+ + K + H +NC F P G + S S
Sbjct: 189 ATFVDFNSSGTCIASSGADNTIKIWDI-RTNKLIQHYKVHNAGVNCFSFHPSGNYLISGS 247
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW--NMKTKKIE 537
D +IK+ D G+ I TL GH V V +S D L SG ADS + +W N +
Sbjct: 248 SDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTNFDSLNYR 307
Query: 538 QDLPGHGDEV 547
+ L H V
Sbjct: 308 ELLSKHSKRV 317
Score = 236 (88.1 bits), Expect = 9.3e-17, P = 9.3e-17
Identities = 58/244 (23%), Positives = 114/244 (46%)
Query: 333 RVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
R H ++C + + + + S D+++ +W + GH + + +
Sbjct: 12 RHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPS 71
Query: 392 YLMRVEATSTGGFK-YDPANPEESS--KHALAKYQAQ--CPEGEKLVSGSDDFTLFLWNP 446
+ ++ + + P+ ES+ K A ++ +G++LV+ SDD ++ +W
Sbjct: 72 GSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGV 131
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
E+ KK L + H + C FSPDGR+IAS D++++LWD + I + +
Sbjct: 132 ER-KKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSAT 190
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
V ++S + S AD+T+K+W+++T K+ Q H V + P G + SG D
Sbjct: 191 FVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDS 250
Query: 567 VLRL 570
+++
Sbjct: 251 TIKI 254
Score = 138 (53.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 45/175 (25%), Positives = 71/175 (40%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S+ H V +FSP+GR +AS D TVR WD ++ +C + Y
Sbjct: 139 SLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSH----QCINI-FTDYGGSA---- 189
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
T D T D + ++ +R + H V F P+G L S
Sbjct: 190 TFVDFNSSGTCIASSGADNTIK---IWDIR-TNKLIQHYKVHNAGVNCFSFHPSGNYLIS 245
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
GS D+T++ D+ ++ GHK VL + +S D SG + + W ++
Sbjct: 246 GSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTN 300
>ZFIN|ZDB-GENE-000616-4 [details] [associations]
symbol:apaf1 "apoptotic protease activating factor 1"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 ZFIN:ZDB-GENE-000616-4 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR017251 PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017
EMBL:CT868708 EMBL:CT025647 IPI:IPI00996819
Ensembl:ENSDART00000127261 Uniprot:E7F2V1
Length = 1264
Score = 287 (106.1 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 122/495 (24%), Positives = 224/495 (45%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
+ H E V+ FSP+ R +A+ + D V+ W+V + + E + +N + T T
Sbjct: 656 LQAHEEDVLCCAFSPDDRHIATCASDKKVKLWNVERGVLIREFE-VEHEEQINHCQFTNT 714
Query: 166 LADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG 225
VL L T + ++ + ++ T ++M GH E V FSPN LA+
Sbjct: 715 GRRVL-LATCSNDK-----FTNTKLWNPNKKTS-QNTMFGHMEPVNHCCFSPNDLYLATS 767
Query: 226 SGDTTVRFWDVTTQTP--------LF--KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA 275
S D +++ ++V++ F E K V C WS D Q++ +N V
Sbjct: 768 SSDGSLKLFEVSSANEWKSIDVDSFFPESDEEIKAMVKCSTWSADGSQIICAARNTVF-V 826
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPF-HLNHQCRRFASSGKDGAIRIWDVILSQCVRV 334
+D T + + ++ + LS F H A + + +W+ S+
Sbjct: 827 FDVETSDLLLE-LKTSR-----LSTIQFCHACPNSSLLAVALSHYTVELWNFESSKKKAE 880
Query: 335 LTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRA-----SDGVMCR----TLEGHAHWVN 384
+ H V C+++ G L+ S+S D+TI++W S V + L H+
Sbjct: 881 CSGHLSWVHCVQFSPDGSLLLSSSDDQTIRLWETDRVHTSSAVALKRDTDVLFSHSD-AT 939
Query: 385 TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC-PEGEKLVS-GSDDFTLF 442
+A + ++V + STG + EE S ++ + C V+ GS+D T+
Sbjct: 940 IIAPDSSNRLQVLSGSTGAVVLES---EELS----SRIRCSCISRNAAFVALGSEDGTVQ 992
Query: 443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL-WDGRIGKFITTLRGH 501
+ K S+ +++GH + ++ +F+ D I+ ++S D +I++ W R G+ + L+GH
Sbjct: 993 VIEVPSSKASV-KLSGHTKTVHHCQFTDDCEILITSSEDSTIRVVWKWRTGECMV-LQGH 1050
Query: 502 VQAV--YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV 559
++ V + + SS S L S S D T+KVW++ ++ QDL H V + D + DG
Sbjct: 1051 MEPVRKFHLLSSSSSPRLFSWSFDGTVKVWDLTRGQMLQDLVCHEGAVLSCDVSSDGRLF 1110
Query: 560 ASGGKDKVLR-LWQN 573
A+ ++ + +W +
Sbjct: 1111 ATTSANRTAKKVWSS 1125
Score = 229 (85.7 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 123/567 (21%), Positives = 219/567 (38%)
Query: 17 FKSDDGEVAGDLLDLPLNV-NTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTLADVLPL 75
F DD +A D + + N E LI ++ +E +N + T T VL L
Sbjct: 668 FSPDDRHIATCASDKKVKLWNVERGVLIREFEVEHEE------QINHCQFTNTGRRVL-L 720
Query: 76 DTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVR 135
T + ++ + ++ T ++M GH E V FSPN LA+ S D +++
Sbjct: 721 ATCSNDK-----FTNTKLWNPNKKTS-QNTMFGHMEPVNHCCFSPNDLYLATSSSDGSLK 774
Query: 136 FWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRP 195
++V++ +K F ++ EI K + + +++ VF V
Sbjct: 775 LFEVSSANE-WKSIDVDSFFPESDEEI-KAMVKCSTWSA-DGSQIICAARNTVFVFDVET 831
Query: 196 VTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCI 255
+ PN LA TV W+ + +C GH WV C+
Sbjct: 832 SDLLLELKTSRLSTIQFCHACPNSSLLAVALSHYTVELWNFESSKKKAECSGHLSWVHCV 891
Query: 256 AWSPDSKQLVSGCKNGVIHAWDSS-TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF-A 313
+SPD L+S + I W++ ++ + + S R
Sbjct: 892 QFSPDGSLLLSSSDDQTIRLWETDRVHTSSAVALKRDTDVLFSHSDATIIAPDSSNRLQV 951
Query: 314 SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMC 373
SG GA+ V+ S+ L+S R +CI + + S+D T++V
Sbjct: 952 LSGSTGAV----VLESE---ELSSRIRC-SCIS-RNAAFVALGSEDGTVQVIEVPSSKAS 1002
Query: 374 RTLEGHAHWVNTLALSTDYLMRV----EATSTGGFKYDPANPEESSKHA--LAKYQA-QC 426
L GH V+ + D + + ++T +K+ H + K+
Sbjct: 1003 VKLSGHTKTVHHCQFTDDCEILITSSEDSTIRVVWKWRTGECMVLQGHMEPVRKFHLLSS 1062
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIK- 485
+L S S D T+ +W+ + + L + H+ + + S DGR+ A+ S +++ K
Sbjct: 1063 SSSPRLFSWSFDGTVKVWDLTRGQM-LQDLVCHEGAVLSCDVSSDGRLFATTSANRTAKK 1121
Query: 486 LWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT----KKIEQDLP 541
+W K I L GH V +S D++ L +G + +++W+M K +D
Sbjct: 1122 VWSSASWKMIFLLEGHKDCVRSCRFSWDNKRLATGDDNGEIRLWSMLDGALLKICSRDTK 1181
Query: 542 G-----HGDEVYAVDWAPDGEKVASGG 563
HG V + ++PD + S G
Sbjct: 1182 DSMDSYHGGWVTDLHFSPDNRVLVSTG 1208
Score = 211 (79.3 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 79/340 (23%), Positives = 145/340 (42%)
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
M H AV FS +G +AS +R + T+ L + + H+ VLC A+SPD +
Sbjct: 614 MHPHQGAVYYACFSKDGSKIASCGASKALRVFKSTSGEKLLELQAHEEDVLCCAFSPDDR 673
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
+ + + + W+ G I + H++ I + S+ K +
Sbjct: 674 HIATCASDKKVKLWNVERGVLIREFEVEHEEQINHCQFTNTG-RRVLLATCSNDKFTNTK 732
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAH 381
+W+ + H V + + L + ++S D ++K++ S ++++ +
Sbjct: 733 LWNPNKKTSQNTMFGHMEPVNHCCFSPNDLYLATSSSDGSLKLFEVSSANEWKSIDVDSF 792
Query: 382 W----------VNTLALSTDYLMRVEATSTGGFKYDPANPE-----ESSKHALAKYQAQC 426
+ V S D + A F +D + ++S+ + ++ C
Sbjct: 793 FPESDEEIKAMVKCSTWSADGSQIICAARNTVFVFDVETSDLLLELKTSRLSTIQFCHAC 852
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P L +T+ LWN E KK A +GH ++CV+FSPDG ++ S+S D++I+L
Sbjct: 853 PNSSLLAVALSHYTVELWNFESSKKK-AECSGHLSWVHCVQFSPDGSLLLSSSDDQTIRL 911
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTL 526
W+ T R H + VA D+ +L S S D+T+
Sbjct: 912 WE--------TDRVHTSSA--VALKRDTDVLFSHS-DATI 940
Score = 191 (72.3 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 111/496 (22%), Positives = 212/496 (42%)
Query: 109 HAEAVISVKFSPNGRS--LASGSGD--TTVRFWDV---TTQTPLF-KCEGTPYL-FYVNE 159
H E + +F+ GR LA+ S D T + W+ T+Q +F E + F N+
Sbjct: 702 HEEQINHCQFTNTGRRVLLATCSNDKFTNTKLWNPNKKTSQNTMFGHMEPVNHCCFSPND 761
Query: 160 TEITKTLAD----VLPLDTLNTEEVVDI-VYQKQAVFQVRPVTRCTSSMPGHAEAVISVK 214
+ + +D + + + N + +D+ + ++ +++ + +C++
Sbjct: 762 LYLATSSSDGSLKLFEVSSANEWKSIDVDSFFPESDEEIKAMVKCST------------- 808
Query: 215 FSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVL--CIAWSPDSKQLVSGCKNGV 272
+S +G + + +T F DV T L + + + + C A P+S L +
Sbjct: 809 WSADGSQIICAARNTVFVF-DVETSDLLLELKTSRLSTIQFCHA-CPNSSLLAVALSHYT 866
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD------- 325
+ W+ + K+ + GH W+ + + P SS D IR+W+
Sbjct: 867 VELWNFESSKKKAE-CSGHLSWVHCVQFSP-----DGSLLLSSSDDQTIRLWETDRVHTS 920
Query: 326 --VILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTI-KVWRASDGVMCRTLEGHAH 381
V L + VL SH+ + + L + S S + + S + C + +A
Sbjct: 921 SAVALKRDTDVLFSHSDATIIAPDSSNRLQVLSGSTGAVVLESEELSSRIRCSCISRNAA 980
Query: 382 WVNTLAL-STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT 440
+V AL S D ++V + + ++ H ++ C E L++ S+D T
Sbjct: 981 FV---ALGSEDGTVQVIEVPSSKASVKLSGHTKTVHHC--QFTDDC---EILITSSEDST 1032
Query: 441 L-FLWNPEKEKKSLARMTGHQQLI---NCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496
+ +W + + + GH + + + + S R+ S SFD ++K+WD G+ +
Sbjct: 1033 IRVVWKWRTGECMV--LQGHMEPVRKFHLLSSSSSPRLF-SWSFDGTVKVWDLTRGQMLQ 1089
Query: 497 TLRGHVQAVYMVAWSSDSRLLVSGSADSTLK-VWNMKTKKIEQDLPGHGDEVYAVDWAPD 555
L H AV SSD RL + SA+ T K VW+ + K+ L GH D V + ++ D
Sbjct: 1090 DLVCHEGAVLSCDVSSDGRLFATTSANRTAKKVWSSASWKMIFLLEGHKDCVRSCRFSWD 1149
Query: 556 GEKVASGGKDKVLRLW 571
+++A+G + +RLW
Sbjct: 1150 NKRLATGDDNGEIRLW 1165
Score = 38 (18.4 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 145 LFK-CEGTPYLFYVNETEI 162
LF+ C PY +Y+++ ++
Sbjct: 427 LFRDCNQRPYRYYLHDLQL 445
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 282 (104.3 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 80/256 (31%), Positives = 131/256 (51%)
Query: 327 ILSQCVRVLTSHTRSVTCIRWG-GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
I S ++ + +H+ +V+ + G SG L+ + +D + +W S +L GH V
Sbjct: 8 ITSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVG 67
Query: 385 TLALSTDYLMRVEATSTGGFK-YDPANPEESSK--HALAKYQAQC------PEGEKLVSG 435
+ ++ V + +G + +D E++K L ++A P GE L SG
Sbjct: 68 CIQFNSSEERVVAGSLSGSLRLWDL----EAAKILRTLMGHKASISSLDFHPMGEYLASG 123
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI 495
S D + LW+ + K + R GH Q + C+ FSPDG+ +ASAS D ++KLWD GK I
Sbjct: 124 SVDSNIKLWDVRR-KGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMI 182
Query: 496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPD 555
T H AV +V + + LL SGSAD T+K+W+++ + G V +V + PD
Sbjct: 183 TEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPD 242
Query: 556 GEKVASGGKDKVLRLW 571
G + SG ++ LR++
Sbjct: 243 GSCLYSGSEN-TLRVY 257
Score = 235 (87.8 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 70/251 (27%), Positives = 113/251 (45%)
Query: 206 HAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
H+ V S+ + GR LA+G D V W V+ + GH V CI ++ +++
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERV 78
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
V+G +G + WD K I + + GHK I++L + P AS D I++W
Sbjct: 79 VAGSLSGSLRLWDLEAAK-ILRTLMGHKASISSLDFHPMG-----EYLASGSVDSNIKLW 132
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
DV CV HT++V C+ + G + SAS D T+K+W G M H V
Sbjct: 133 DVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAV 192
Query: 384 NTLALS-TDYLMRVEATSTGGFKYD--PANPEESSKHALAKYQAQC--PEGEKLVSGSDD 438
N + +YL+ + +D N SS+ ++ P+G L SGS++
Sbjct: 193 NVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN 252
Query: 439 -FTLFLWNPEK 448
++ W P++
Sbjct: 253 TLRVYGWEPDR 263
Score = 221 (82.9 bits), Expect = 9.1e-15, P = 9.1e-15
Identities = 58/203 (28%), Positives = 98/203 (48%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH ++ S+ F P G LASGS D+ ++ WDV + +F+ +GH V C+A+SPD
Sbjct: 100 TLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDG 159
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
K L S + + WD GK I + H + + FH N AS D +
Sbjct: 160 KWLASASDDSTVKLWDLIAGKMITE-FTSHTSAVNVVQ---FHPNEYL--LASGSADRTV 213
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++WD+ + T V + + G +YS S++ T++V+ + C + H
Sbjct: 214 KLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN-TLRVY-GWEPDRCFDVV-HV 270
Query: 381 HW--VNTLALSTDYLMRVEATST 401
W V+ LA+S + ++ V + T
Sbjct: 271 GWGKVSDLAISNNQMIAVSYSHT 293
Score = 179 (68.1 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 52/195 (26%), Positives = 86/195 (44%)
Query: 109 HAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
H+ V S+ + GR LA+G D V W V+ + G + V + +
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTG--HTSAVGCIQFNSSEE 76
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
V+ + + D+ K + R ++ GH ++ S+ F P G LASGS
Sbjct: 77 RVVAGSLSGSLRLWDLEAAK--------ILR---TLMGHKASISSLDFHPMGEYLASGSV 125
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
D+ ++ WDV + +F+ +GH V C+A+SPD K L S + + WD GK I +
Sbjct: 126 DSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITE- 184
Query: 288 MRGHKQWITALSWEP 302
H + + + P
Sbjct: 185 FTSHTSAVNVVQFHP 199
Score = 168 (64.2 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 63/268 (23%), Positives = 109/268 (40%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C S+ GH AV ++F+ + + +GS ++R WD+ L G ++
Sbjct: 55 CIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMG-------HKAS 107
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
I+ D P+ VD ++ VR C GH +AV + FSP+G+
Sbjct: 108 ISSL--DFHPMGEYLASGSVD---SNIKLWDVRR-KGCVFRYKGHTQAVRCLAFSPDGKW 161
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
LAS S D+TV+ WD+ + + H V + + P+ L SG + + WD
Sbjct: 162 LASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKF 221
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341
IG G + ++ + P + C SG + +R++ +C V+
Sbjct: 222 NMIGSS-EGETGVVRSVLFNP---DGSC---LYSGSENTLRVYGWEPDRCFDVVHVGWGK 274
Query: 342 VTCIRWGGSGLIYSASQDRTIKVWRASD 369
V+ + + +I + S T W D
Sbjct: 275 VSDLAISNNQMI-AVSYSHTNVSWYVVD 301
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 252 (93.8 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 85/300 (28%), Positives = 130/300 (43%)
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
G + +K +T+L W N A+ DG RIW L H +
Sbjct: 282 GHDVPSNKD-VTSLDW-----NTNGTLLATGSYDGFARIWTED-GNLASTLGQHKGPIFA 334
Query: 345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA------HWVN--TLA-LSTDYLM 394
++W G I SA D+T +W A G + H+ W N T A STD M
Sbjct: 335 LKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTD--M 392
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
+ G + P + + + + P G L S SDD TL +W+ K++ +
Sbjct: 393 CIHVCRLGCDR--PVKTFQGHTNEVNAIKWD-PSGMLLASCSDDMTLKIWSM-KQEVCIH 448
Query: 455 RMTGHQQLINCVEFSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ H + I +++SP G ++ASASFD +++LWD G TL H + V
Sbjct: 449 DLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPV 508
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
Y VA+S D + L SGS D + +WN ++ + G G ++ V W G+KV + D
Sbjct: 509 YSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRGTGG-IFEVCWNARGDKVGASASD 567
Score = 221 (82.9 bits), Expect = 6.0e-18, Sum P(2) = 6.0e-18
Identities = 64/265 (24%), Positives = 119/265 (44%)
Query: 326 VILSQCVRVLTSH----TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++L C+R H + VT + W +G L+ + S D ++W DG + TL H
Sbjct: 272 LVLRHCIRE-GGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIW-TEDGNLASTLGQHK 329
Query: 381 HWVNTLALST--DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSG 435
+ L + +Y++ T +D E + H+ S
Sbjct: 330 GPIFALKWNRKGNYILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASC 388
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI 495
S D + + ++ + GH +N +++ P G ++AS S D ++K+W + I
Sbjct: 389 STDMCIHVCRLGCDRP-VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCI 447
Query: 496 TTLRGHVQAVYMVAWS---------SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
L+ H + +Y + WS + + +L S S DST+++W+++ L H +
Sbjct: 448 HDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEP 507
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
VY+V ++PDG+ +ASG DK + +W
Sbjct: 508 VYSVAFSPDGKYLASGSFDKCVHIW 532
Score = 161 (61.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 58/208 (27%), Positives = 85/208 (40%)
Query: 195 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV-------TTQTPLFKC-- 245
P ++ T + GH V ++P LASGSGD+T R W++ +TQ L C
Sbjct: 221 PSSKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 279
Query: 246 EG-H----KHWVLCIAWSPDSKQLVSGCKNGVIHAW--DSSTGKQIGQPMRGHKQWITAL 298
EG H V + W+ + L +G +G W D + +GQ HK I AL
Sbjct: 280 EGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQ----HKGPIFAL 335
Query: 299 SWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ 358
W N + S+G D IWD + + H+ + W + S S
Sbjct: 336 KW-----NRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCST 390
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTL 386
D I V R +T +GH + VN +
Sbjct: 391 DMCIHVCRLGCDRPVKTFQGHTNEVNAI 418
Score = 149 (57.5 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 56/229 (24%), Positives = 96/229 (41%)
Query: 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
P H+ + V + N + AS S D + + P+ +G + NE K
Sbjct: 368 PFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQG-----HTNEVNAIKWD 421
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----- 221
+ L + + + + I KQ V C + H + + ++K+SP G +
Sbjct: 422 PSGMLLASCSDDMTLKIWSMKQEV--------CIHDLQAHNKEIYTIKWSPTGPATSNPN 473
Query: 222 ----LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
LAS S D+TVR WD+ H+ V +A+SPD K L SG + +H W+
Sbjct: 474 SNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN 533
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ +G + RG I + W N + + +S DG++ + D+
Sbjct: 534 TQSGNLV-HSYRG-TGGIFEVCW-----NARGDKVGASASDGSVCVLDL 575
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 33/139 (23%), Positives = 61/139 (43%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEK---------KSLARMTGHQ----QLINCVEFSPDGR 473
P + L SGS D T +WN + + R GH + + ++++ +G
Sbjct: 242 PVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGT 301
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++A+ S+D ++W G +TL H ++ + W+ ++S D T +W+ T
Sbjct: 302 LLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHT 360
Query: 534 KKIEQDLPGHGDEVYAVDW 552
+ +Q P H VDW
Sbjct: 361 GEAKQQFPFHSAPALDVDW 379
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 41/179 (22%), Positives = 76/179 (42%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R + GH V ++K+ P+G LAS S D T++ W + + + + N+
Sbjct: 403 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAH------NKE 456
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTR--CTSSMPGHAEAVISVKFSPN 218
T + P + ++ + ++ + R CT ++ H E V SV FSP+
Sbjct: 457 IYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPD 516
Query: 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
G+ LASGS D V W+ + + G + + W+ ++ + +G + D
Sbjct: 517 GKYLASGSFDKCVHIWNTQSGNLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLD 574
Score = 129 (50.5 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 32/91 (35%), Positives = 47/91 (51%)
Query: 496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK------------IEQ---DL 540
T LRGH V++ AW+ S LL SGS DST ++WN+ I + D+
Sbjct: 226 TVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 285
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
P + D V ++DW +G +A+G D R+W
Sbjct: 286 PSNKD-VTSLDWNTNGTLLATGSYDGFARIW 315
Score = 74 (31.1 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 98 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
P ++ T + GH V ++P LASGSGD+T R W++
Sbjct: 221 PSSKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNL 261
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 289 (106.8 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 111/489 (22%), Positives = 205/489 (41%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C ++M GH AV +FSPN +AS S D TV+ W+V + L E + +E +
Sbjct: 734 CRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQQ 793
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
+ + +++ ++ + K +F V T + H + F
Sbjct: 794 DDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDEL 853
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+A ++ W++ + + + C GH WV C+ +S D ++ ++ I W+ T
Sbjct: 854 VAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE--TN 911
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341
K K + + FH N + A + I++ + + + T S
Sbjct: 912 KVCKSSDAVLKSELDVV----FH-NGEVMILAIYNQKH-IQLINGNTDSII-MQTEPQES 964
Query: 342 VTCIRWGGSGLIYSA--SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT 399
+ C L ++A ++ IKV R DG + + E + V +TD + +
Sbjct: 965 LICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSA 1024
Query: 400 STG-----GFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN--PEKEKKS 452
++ + + K A+ + E KL+S S D T+ +WN K +K
Sbjct: 1025 HDAVIQVWNWQLNECVFLKGHKEAIKDFAFL--ENSKLLSWSFDGTVKVWNITTGKTEKD 1082
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
A G +++C SPDG +S S DK+ K+W + L+GH V A+S
Sbjct: 1083 FACHRG--AVLSCA-VSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSP 1139
Query: 513 DSRLLVSGSADSTLKVWNMKTKK---------IEQDLPGHGDEVYAVDWAPDGEK-VASG 562
++LL +G +++W++ T + ++++ P HG V + ++PD + V+SG
Sbjct: 1140 SNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSSG 1199
Query: 563 GKDKVLRLW 571
G L+ W
Sbjct: 1200 G---YLKWW 1205
Score = 206 (77.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 72/303 (23%), Positives = 130/303 (42%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H +AV FS + + +AS D T++ + + L + H +LC +S D K +
Sbjct: 613 HRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVA 672
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ + + W+S TGK + H + + F+ A+ D I++WD
Sbjct: 673 TCSADKKVKIWNSRTGKCL-YVYEEHTEQVNCCQ---FNNRRGQYLLATCSDDTYIKLWD 728
Query: 326 VILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
+ C + H +V+ R+ I S S D T+K+W RT+E + N
Sbjct: 729 LKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRN 788
Query: 385 ---------------TLALSTDYLMRVEATSTGGFKYDPANPEES---SKHALAKYQAQC 426
+ + S+D ++ V F +N S H+ +Y C
Sbjct: 789 ADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFC 848
Query: 427 PEGEKLVSGS-DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIK 485
G++LV+ + ++ LWN + K +A GH ++CV FS DG + ++S D++I+
Sbjct: 849 A-GDELVAVALSHCSIELWNIKSLSK-VADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIR 906
Query: 486 LWD 488
+W+
Sbjct: 907 IWE 909
Score = 203 (76.5 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 103/489 (21%), Positives = 198/489 (40%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRS---LASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYV 157
+C H E V +F+ N R LA+ S DT ++ WD+ + C T + +V
Sbjct: 689 KCLYVYEEHTEQVNCCQFN-NRRGQYLLATCSDDTYIKLWDLKDKY----CRNTMF-GHV 742
Query: 158 NETEITKTLADVLPLDTLNTEEVVDI--VYQKQAV--FQVRPVTRCTSSMPGHAEAVISV 213
N + + + + +T+ V + V+ + +++ R E ++
Sbjct: 743 NAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKC 802
Query: 214 -KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVL--CIAWSPDSKQLVSGCKN 270
+S + ++ + + + F DVTT L + H + C + D V+ +
Sbjct: 803 CSWSRSSDTILVVAKNKLLLF-DVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVA-LSH 860
Query: 271 GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV--IL 328
I W+ + ++ RGH W+ +++ + F +S +D IRIW+ +
Sbjct: 861 CSIELWNIKSLSKVAD-CRGHTSWVHCVTF-----SSDGSLFLTSSEDQTIRIWETNKVC 914
Query: 329 SQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRAS-DGVMCRTLEGHAHWVNTLA 387
VL S + + G +I + + I++ + D ++ +T E +
Sbjct: 915 KSSDAVLKSE---LDVVFHNGEVMILAIYNQKHIQLINGNTDSIIMQT-EPQESLICCCC 970
Query: 388 LSTDYLMRVEATSTGGFKYDPANPEE--SSKHALAKYQAQC---PEGEKLVSGSDDFTLF 442
LS D G K +S+ A C + + L+S + D +
Sbjct: 971 LSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQ 1030
Query: 443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV 502
+WN + + + GH++ I F + +++ S SFD ++K+W+ GK H
Sbjct: 1031 VWNWQLNE--CVFLKGHKEAIKDFAFLENSKLL-SWSFDGTVKVWNITTGKTEKDFACHR 1087
Query: 503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASG 562
AV A S D S SAD T K+W+ ++ + +L GH V ++P + +A+G
Sbjct: 1088 GAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATG 1147
Query: 563 GKDKVLRLW 571
+R+W
Sbjct: 1148 DDKGDIRIW 1156
Score = 166 (63.5 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 43/148 (29%), Positives = 70/148 (47%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H AV+S SP+G +S S D T + W + + L + +GH+ V C A+SP +K L
Sbjct: 1086 HRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLA 1145
Query: 266 SGCKNGVIHAWDSSTGK--------QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK 317
+G G I WD TG+ + + H W+T LS+ P + SSG
Sbjct: 1146 TGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSP-----DSKMLVSSG- 1199
Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCI 345
G ++ WDV + ++ ++ ++ I
Sbjct: 1200 -GYLKWWDVTTGESLQTFYTNGTNLKSI 1226
Score = 162 (62.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 67/281 (23%), Positives = 124/281 (44%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H + ++ FS + + +A+ S D V+ W+ T L+ E + VN +
Sbjct: 655 HDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYE--EHTEQVNCCQFNNRRGQ 712
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
L L T + D Y K ++ ++ C ++M GH AV +FSPN +AS S D
Sbjct: 713 YL-LATCS-----DDTYIK--LWDLKD-KYCRNTMFGHVNAVSHCRFSPNDDYIASCSTD 763
Query: 229 TTVRFWDVTTQTPL--------FKCEGHKH-----WVLCIAWSPDSKQLVSGCKNGVIHA 275
TV+ W+V + L F+ + V C +WS S ++ KN ++
Sbjct: 764 GTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLL-L 822
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
+D +T + Q + H + + + F + A S +I +W++ V
Sbjct: 823 FDVTTSNLLTQVIISHH---STIQYCDFCAGDELVAVALS--HCSIELWNIKSLSKVADC 877
Query: 336 TSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVMCRT 375
HT V C+ + G ++ ++S+D+TI++W + +C++
Sbjct: 878 RGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNK--VCKS 916
Score = 134 (52.2 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 43/166 (25%), Positives = 78/166 (46%)
Query: 411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL-WNPEKEKKSLARMT--GHQQLINCVE 467
PE S + AK +AQ G T +L W +K K+L+R+ H+ +
Sbjct: 572 PETSEVYQQAKLRAQRETG----------TFYLEWINKKSLKNLSRLVVRPHRDAVYHAC 621
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527
FS D + IAS DK+++++ G+ + + H + +S+D + + + SAD +K
Sbjct: 622 FSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVATCSADKKVK 681
Query: 528 VWNMKTKKIEQDLPGHGDEVYAVDWAPD-GEKV-ASGGKDKVLRLW 571
+WN +T K H ++V + G+ + A+ D ++LW
Sbjct: 682 IWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLW 727
Score = 45 (20.9 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 34 NVNTEHLSLIVNSLLQQDEGTPYLFY---VNE--TEITKTLADVLP-LDTLNTEEVVD 85
N E ++++N+LL +D FY ++E ++ L D +P + N + +D
Sbjct: 47 NTQKERAAMLINTLLTKDNNAYRSFYNALLHEGYRDLAALLQDGIPAFSSKNGKNAMD 104
Score = 44 (20.5 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 10/72 (13%), Positives = 27/72 (37%)
Query: 79 NTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 138
+++ ++ + K +F V T + H + F +A ++ W+
Sbjct: 808 SSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSHCSIELWN 867
Query: 139 VTTQTPLFKCEG 150
+ + + + C G
Sbjct: 868 IKSLSKVADCRG 879
Score = 41 (19.5 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 323 IWDV-IL----SQCVRVLTSHTRSVT 343
IWD +L +QC ++TS RSVT
Sbjct: 246 IWDSWVLKAFDNQCQVLITSRDRSVT 271
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 289 (106.8 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 111/489 (22%), Positives = 205/489 (41%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C ++M GH AV +FSPN +AS S D TV+ W+V + L E + +E +
Sbjct: 735 CRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQQ 794
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
+ + +++ ++ + K +F V T + H + F
Sbjct: 795 DDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDEL 854
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+A ++ W++ + + + C GH WV C+ +S D ++ ++ I W+ T
Sbjct: 855 VAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE--TN 912
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341
K K + + FH N + A + I++ + + + T S
Sbjct: 913 KVCKSSDAVLKSELDVV----FH-NGEVMILAIYNQKH-IQLINGNTDSII-MQTEPQES 965
Query: 342 VTCIRWGGSGLIYSA--SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT 399
+ C L ++A ++ IKV R DG + + E + V +TD + +
Sbjct: 966 LICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSA 1025
Query: 400 STG-----GFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN--PEKEKKS 452
++ + + K A+ + E KL+S S D T+ +WN K +K
Sbjct: 1026 HDAVIQVWNWQLNECVFLKGHKEAIKDFAFL--ENSKLLSWSFDGTVKVWNITTGKTEKD 1083
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
A G +++C SPDG +S S DK+ K+W + L+GH V A+S
Sbjct: 1084 FACHRG--AVLSCA-VSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSP 1140
Query: 513 DSRLLVSGSADSTLKVWNMKTKK---------IEQDLPGHGDEVYAVDWAPDGEK-VASG 562
++LL +G +++W++ T + ++++ P HG V + ++PD + V+SG
Sbjct: 1141 SNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSSG 1200
Query: 563 GKDKVLRLW 571
G L+ W
Sbjct: 1201 G---YLKWW 1206
Score = 206 (77.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 72/303 (23%), Positives = 130/303 (42%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H +AV FS + + +AS D T++ + + L + H +LC +S D K +
Sbjct: 614 HRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVA 673
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ + + W+S TGK + H + + F+ A+ D I++WD
Sbjct: 674 TCSADKKVKIWNSRTGKCL-YVYEEHTEQVNCCQ---FNNRRGQYLLATCSDDTYIKLWD 729
Query: 326 VILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
+ C + H +V+ R+ I S S D T+K+W RT+E + N
Sbjct: 730 LKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRN 789
Query: 385 ---------------TLALSTDYLMRVEATSTGGFKYDPANPEES---SKHALAKYQAQC 426
+ + S+D ++ V F +N S H+ +Y C
Sbjct: 790 ADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFC 849
Query: 427 PEGEKLVSGS-DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIK 485
G++LV+ + ++ LWN + K +A GH ++CV FS DG + ++S D++I+
Sbjct: 850 A-GDELVAVALSHCSIELWNIKSLSK-VADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIR 907
Query: 486 LWD 488
+W+
Sbjct: 908 IWE 910
Score = 203 (76.5 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 103/489 (21%), Positives = 198/489 (40%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRS---LASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYV 157
+C H E V +F+ N R LA+ S DT ++ WD+ + C T + +V
Sbjct: 690 KCLYVYEEHTEQVNCCQFN-NRRGQYLLATCSDDTYIKLWDLKDKY----CRNTMF-GHV 743
Query: 158 NETEITKTLADVLPLDTLNTEEVVDI--VYQKQAV--FQVRPVTRCTSSMPGHAEAVISV 213
N + + + + +T+ V + V+ + +++ R E ++
Sbjct: 744 NAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKC 803
Query: 214 -KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVL--CIAWSPDSKQLVSGCKN 270
+S + ++ + + + F DVTT L + H + C + D V+ +
Sbjct: 804 CSWSRSSDTILVVAKNKLLLF-DVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVA-LSH 861
Query: 271 GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV--IL 328
I W+ + ++ RGH W+ +++ + F +S +D IRIW+ +
Sbjct: 862 CSIELWNIKSLSKVAD-CRGHTSWVHCVTF-----SSDGSLFLTSSEDQTIRIWETNKVC 915
Query: 329 SQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRAS-DGVMCRTLEGHAHWVNTLA 387
VL S + + G +I + + I++ + D ++ +T E +
Sbjct: 916 KSSDAVLKSE---LDVVFHNGEVMILAIYNQKHIQLINGNTDSIIMQT-EPQESLICCCC 971
Query: 388 LSTDYLMRVEATSTGGFKYDPANPEE--SSKHALAKYQAQC---PEGEKLVSGSDDFTLF 442
LS D G K +S+ A C + + L+S + D +
Sbjct: 972 LSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQ 1031
Query: 443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV 502
+WN + + + GH++ I F + +++ S SFD ++K+W+ GK H
Sbjct: 1032 VWNWQLNE--CVFLKGHKEAIKDFAFLENSKLL-SWSFDGTVKVWNITTGKTEKDFACHR 1088
Query: 503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASG 562
AV A S D S SAD T K+W+ ++ + +L GH V ++P + +A+G
Sbjct: 1089 GAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATG 1148
Query: 563 GKDKVLRLW 571
+R+W
Sbjct: 1149 DDKGDIRIW 1157
Score = 166 (63.5 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 43/148 (29%), Positives = 70/148 (47%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H AV+S SP+G +S S D T + W + + L + +GH+ V C A+SP +K L
Sbjct: 1087 HRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLA 1146
Query: 266 SGCKNGVIHAWDSSTGK--------QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK 317
+G G I WD TG+ + + H W+T LS+ P + SSG
Sbjct: 1147 TGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSP-----DSKMLVSSG- 1200
Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCI 345
G ++ WDV + ++ ++ ++ I
Sbjct: 1201 -GYLKWWDVTTGESLQTFYTNGTNLKSI 1227
Score = 162 (62.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 67/281 (23%), Positives = 124/281 (44%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H + ++ FS + + +A+ S D V+ W+ T L+ E + VN +
Sbjct: 656 HDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYE--EHTEQVNCCQFNNRRGQ 713
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
L L T + D Y K ++ ++ C ++M GH AV +FSPN +AS S D
Sbjct: 714 YL-LATCS-----DDTYIK--LWDLKD-KYCRNTMFGHVNAVSHCRFSPNDDYIASCSTD 764
Query: 229 TTVRFWDVTTQTPL--------FKCEGHKH-----WVLCIAWSPDSKQLVSGCKNGVIHA 275
TV+ W+V + L F+ + V C +WS S ++ KN ++
Sbjct: 765 GTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLL-L 823
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
+D +T + Q + H + + + F + A S +I +W++ V
Sbjct: 824 FDVTTSNLLTQVIISHH---STIQYCDFCAGDELVAVALS--HCSIELWNIKSLSKVADC 878
Query: 336 TSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVMCRT 375
HT V C+ + G ++ ++S+D+TI++W + +C++
Sbjct: 879 RGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNK--VCKS 917
Score = 134 (52.2 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 43/166 (25%), Positives = 78/166 (46%)
Query: 411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL-WNPEKEKKSLARMT--GHQQLINCVE 467
PE S + AK +AQ G T +L W +K K+L+R+ H+ +
Sbjct: 573 PETSEVYQQAKLRAQRETG----------TFYLEWINKKSLKNLSRLVVRPHRDAVYHAC 622
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527
FS D + IAS DK+++++ G+ + + H + +S+D + + + SAD +K
Sbjct: 623 FSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVATCSADKKVK 682
Query: 528 VWNMKTKKIEQDLPGHGDEVYAVDWAPD-GEKV-ASGGKDKVLRLW 571
+WN +T K H ++V + G+ + A+ D ++LW
Sbjct: 683 IWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLW 728
Score = 45 (20.9 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 34 NVNTEHLSLIVNSLLQQDEGTPYLFY---VNE--TEITKTLADVLP-LDTLNTEEVVD 85
N E ++++N+LL +D FY ++E ++ L D +P + N + +D
Sbjct: 48 NTQKERAAMLINTLLTKDNNAYRSFYNALLHEGYRDLAALLQDGIPAFSSKNGKNAMD 105
Score = 44 (20.5 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 10/72 (13%), Positives = 27/72 (37%)
Query: 79 NTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 138
+++ ++ + K +F V T + H + F +A ++ W+
Sbjct: 809 SSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSHCSIELWN 868
Query: 139 VTTQTPLFKCEG 150
+ + + + C G
Sbjct: 869 IKSLSKVADCRG 880
Score = 41 (19.5 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 323 IWDV-IL----SQCVRVLTSHTRSVT 343
IWD +L +QC ++TS RSVT
Sbjct: 247 IWDSWVLKAFDNQCQVLITSRDRSVT 272
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 289 (106.8 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 111/489 (22%), Positives = 205/489 (41%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C ++M GH AV +FSPN +AS S D TV+ W+V + L E + +E +
Sbjct: 738 CRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQQ 797
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
+ + +++ ++ + K +F V T + H + F
Sbjct: 798 DDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDEL 857
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+A ++ W++ + + + C GH WV C+ +S D ++ ++ I W+ T
Sbjct: 858 VAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE--TN 915
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341
K K + + FH N + A + I++ + + + T S
Sbjct: 916 KVCKSSDAVLKSELDVV----FH-NGEVMILAIYNQKH-IQLINGNTDSII-MQTEPQES 968
Query: 342 VTCIRWGGSGLIYSA--SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT 399
+ C L ++A ++ IKV R DG + + E + V +TD + +
Sbjct: 969 LICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSA 1028
Query: 400 STG-----GFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN--PEKEKKS 452
++ + + K A+ + E KL+S S D T+ +WN K +K
Sbjct: 1029 HDAVIQVWNWQLNECVFLKGHKEAIKDFAFL--ENSKLLSWSFDGTVKVWNITTGKTEKD 1086
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
A G +++C SPDG +S S DK+ K+W + L+GH V A+S
Sbjct: 1087 FACHRG--AVLSCA-VSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSP 1143
Query: 513 DSRLLVSGSADSTLKVWNMKTKK---------IEQDLPGHGDEVYAVDWAPDGEK-VASG 562
++LL +G +++W++ T + ++++ P HG V + ++PD + V+SG
Sbjct: 1144 SNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSSG 1203
Query: 563 GKDKVLRLW 571
G L+ W
Sbjct: 1204 G---YLKWW 1209
Score = 195 (73.7 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 105/493 (21%), Positives = 199/493 (40%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRS---LASGSGDT----TVRFWDVTTQTPLFKCEGTPY 153
+C H E V +F+ N R LA+ S DT TV+ WD+ + C T +
Sbjct: 689 KCLYVYEEHTEQVNCCQFN-NRRGQYLLATCSDDTYIKNTVQLWDLKDKY----CRNTMF 743
Query: 154 LFYVNETEITKTLADVLPLDTLNTEEVVDI--VYQKQAV--FQVRPVTRCTSSMPGHAEA 209
+VN + + + + +T+ V + V+ + +++ R E
Sbjct: 744 -GHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEV 802
Query: 210 VISV-KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVL--CIAWSPDSKQLVS 266
++ +S + ++ + + + F DVTT L + H + C + D V+
Sbjct: 803 LVKCCSWSRSSDTILVVAKNKLLLF-DVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVA 861
Query: 267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ I W+ + ++ RGH W+ +++ + F +S +D IRIW+
Sbjct: 862 -LSHCSIELWNIKSLSKVAD-CRGHTSWVHCVTF-----SSDGSLFLTSSEDQTIRIWET 914
Query: 327 --ILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRAS-DGVMCRTLEGHAHWV 383
+ VL S + + G +I + + I++ + D ++ +T E +
Sbjct: 915 NKVCKSSDAVLKSE---LDVVFHNGEVMILAIYNQKHIQLINGNTDSIIMQT-EPQESLI 970
Query: 384 NTLALSTDYLMRVEATSTGGFKYDPANPEE--SSKHALAKYQAQC---PEGEKLVSGSDD 438
LS D G K +S+ A C + + L+S + D
Sbjct: 971 CCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHD 1030
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL 498
+ +WN + + + GH++ I F + +++ S SFD ++K+W+ GK
Sbjct: 1031 AVIQVWNWQLNE--CVFLKGHKEAIKDFAFLENSKLL-SWSFDGTVKVWNITTGKTEKDF 1087
Query: 499 RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK 558
H AV A S D S SAD T K+W+ ++ + +L GH V ++P +
Sbjct: 1088 ACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKL 1147
Query: 559 VASGGKDKVLRLW 571
+A+G +R+W
Sbjct: 1148 LATGDDKGDIRIW 1160
Score = 167 (63.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 65/281 (23%), Positives = 124/281 (44%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H + ++ FS + + +A+ S D V+ W+ T L+ E + VN +
Sbjct: 655 HDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYE--EHTEQVNCCQFNNRRGQ 712
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
L L T + + + Q ++ ++ C ++M GH AV +FSPN +AS S D
Sbjct: 713 YL-LATCSDDTYIKNTVQ---LWDLKD-KYCRNTMFGHVNAVSHCRFSPNDDYIASCSTD 767
Query: 229 TTVRFWDVTTQTPL--------FKCEGHKH-----WVLCIAWSPDSKQLVSGCKNGVIHA 275
TV+ W+V + L F+ + V C +WS S ++ KN ++
Sbjct: 768 GTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLL-L 826
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
+D +T + Q + H + + + F + A S +I +W++ V
Sbjct: 827 FDVTTSNLLTQVIISHH---STIQYCDFCAGDELVAVALS--HCSIELWNIKSLSKVADC 881
Query: 336 TSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVMCRT 375
HT V C+ + G ++ ++S+D+TI++W + +C++
Sbjct: 882 RGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNK--VCKS 920
Score = 166 (63.5 bits), Expect = 6.3e-08, Sum P(3) = 6.3e-08
Identities = 43/148 (29%), Positives = 70/148 (47%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H AV+S SP+G +S S D T + W + + L + +GH+ V C A+SP +K L
Sbjct: 1090 HRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLA 1149
Query: 266 SGCKNGVIHAWDSSTGK--------QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK 317
+G G I WD TG+ + + H W+T LS+ P + SSG
Sbjct: 1150 TGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSP-----DSKMLVSSG- 1203
Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCI 345
G ++ WDV + ++ ++ ++ I
Sbjct: 1204 -GYLKWWDVTTGESLQTFYTNGTNLKSI 1230
Score = 138 (53.6 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 40/178 (22%), Positives = 75/178 (42%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H +AV FS + + +AS D T++ + + L + H +LC +S D K +
Sbjct: 613 HRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVA 672
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD-----GA 320
+ + + W+S TGK + H + + + N + + ++ D
Sbjct: 673 TCSADKKVKIWNSRTGKCL-YVYEEHTEQVNCCQFN----NRRGQYLLATCSDDTYIKNT 727
Query: 321 IRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLE 377
+++WD+ C + H +V+ R+ I S S D T+K+W RT+E
Sbjct: 728 VQLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIE 785
Score = 129 (50.5 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 38/140 (27%), Positives = 67/140 (47%)
Query: 411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL-WNPEKEKKSLARMT--GHQQLINCVE 467
PE S + AK +AQ G T +L W +K K+L+R+ H+ +
Sbjct: 572 PETSEVYQQAKLRAQRETG----------TFYLEWINKKSLKNLSRLVVRPHRDAVYHAC 621
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527
FS D + IAS DK+++++ G+ + + H + +S+D + + + SAD +K
Sbjct: 622 FSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVATCSADKKVK 681
Query: 528 VWNMKTKKIEQDLPGHGDEV 547
+WN +T K H ++V
Sbjct: 682 IWNSRTGKCLYVYEEHTEQV 701
Score = 115 (45.5 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 36/159 (22%), Positives = 67/159 (42%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEK-------EKKSLARMTGHQQ-----LINCVEFSPDGRI 474
P + + S S D T+ LWN E K R QQ L+ C +S
Sbjct: 756 PNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDT 815
Query: 475 IASASFDKSIKLWDGRIGKFIT-TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
I + +K + L+D +T + H + + + L+ + ++++WN+K+
Sbjct: 816 ILVVAKNKLL-LFDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSHCSIELWNIKS 874
Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
D GH V+ V ++ DG + +D+ +R+W+
Sbjct: 875 LSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE 913
Score = 78 (32.5 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 16/76 (21%), Positives = 34/76 (44%)
Query: 310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRAS 368
+R AS G D ++++ + + +++H + C + + + S D+ +K+W +
Sbjct: 627 QRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVATCSADKKVKIWNSR 686
Query: 369 DGVMCRTLEGHAHWVN 384
G E H VN
Sbjct: 687 TGKCLYVYEEHTEQVN 702
Score = 45 (20.9 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 34 NVNTEHLSLIVNSLLQQDEGTPYLFY---VNE--TEITKTLADVLP-LDTLNTEEVVD 85
N E ++++N+LL +D FY ++E ++ L D +P + N + +D
Sbjct: 47 NTQKERAAMLINTLLTKDNNAYRSFYNALLHEGYRDLAALLQDGIPAFSSKNGKNAMD 104
Score = 44 (20.5 bits), Expect = 6.3e-08, Sum P(3) = 6.3e-08
Identities = 10/72 (13%), Positives = 27/72 (37%)
Query: 79 NTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 138
+++ ++ + K +F V T + H + F +A ++ W+
Sbjct: 812 SSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSHCSIELWN 871
Query: 139 VTTQTPLFKCEG 150
+ + + + C G
Sbjct: 872 IKSLSKVADCRG 883
Score = 41 (19.5 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 323 IWDV-IL----SQCVRVLTSHTRSVT 343
IWD +L +QC ++TS RSVT
Sbjct: 246 IWDSWVLKAFDNQCQVLITSRDRSVT 271
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 257 (95.5 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 73/252 (28%), Positives = 131/252 (51%)
Query: 335 LTSHTRSVTCIRW--GGSGLIYSASQDRTIKVWRA-----SDGVMCRTLEGHAHWVNTLA 387
+ +HT VT I S +I ++S+D++I +W+ S GV R + GH+H+V +
Sbjct: 11 MCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVV 70
Query: 388 LSTDYLMRVEATSTGGFK-YDPANPEESSK---HALAKYQ-AQCPEGEKLVSGSDDFTLF 442
LS+D + + G + +D A E + + H A + ++VS S D T+
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIK 130
Query: 443 LWNPEKE-KKSLARMTGHQQLINCVEFSPDGRI--IASASFDKSIKLWDGRIGKFITTLR 499
LWN E K +++ GH++ ++CV FSP+ + I SAS+DK++K+W+ + K TL
Sbjct: 131 LWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLA 190
Query: 500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV 559
GH + VA S D L SG D + +W++ K L G ++++ ++P+ +
Sbjct: 191 GHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-GSIIHSLCFSPNRYWL 249
Query: 560 ASGGKDKVLRLW 571
+ ++ + R+W
Sbjct: 250 CAATENSI-RIW 260
Score = 192 (72.6 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 52/199 (26%), Positives = 92/199 (46%)
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
M GH+ V V S +G+ SGS D +R WD+ T + GH VL +A+S D++
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 263 QLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
Q+VS ++ I W++ K GHK+W++ + + P N S+ D +
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSP---NTLVPTIVSASWDKTV 175
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++W++ + L H+ + + G L S +D I +W ++G +LE +
Sbjct: 176 KVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS 235
Query: 381 HWVNTLALSTDYLMRVEAT 399
+++L S + AT
Sbjct: 236 I-IHSLCFSPNRYWLCAAT 253
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 44/171 (25%), Positives = 84/171 (49%)
Query: 200 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP--LFKCEGHKHWVLCIAW 257
T GH + V+SV FS + R + S S D T++ W+ + + + +GHK WV C+ +
Sbjct: 98 TRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRF 157
Query: 258 SPDS--KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS 315
SP++ +VS + + W+ K + + GH ++ ++ P C AS
Sbjct: 158 SPNTLVPTIVSASWDKTVKVWNLQNCK-LRNTLAGHSGYLNTVAVSPD--GSLC---ASG 211
Query: 316 GKDGAIRIWDVILSQCVRVLTSHTRSVT-CIRWGGSGLIYSASQDRTIKVW 365
GKDG I +WD L++ ++ + S+ + + + A+ + +I++W
Sbjct: 212 GKDGVILLWD--LAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIW 260
Score = 164 (62.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 56/185 (30%), Positives = 85/185 (45%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
M GH+ V V S +G+ SGS D +R WD+ T E T +V T+
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATG------ESTRR--FVGHTK---- 106
Query: 166 LADVLPLD-TLNTEEVVDIVYQKQAVFQVRPVTRCT---SSMPGHAEAVISVKFSPNGR- 220
DVL + + + ++V + + + + C S GH E V V+FSPN
Sbjct: 107 --DVLSVAFSTDNRQIVS-ASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLV 163
Query: 221 -SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
++ S S D TV+ W++ GH ++ +A SPD SG K+GVI WD +
Sbjct: 164 PTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLA 223
Query: 280 TGKQI 284
GK++
Sbjct: 224 EGKKL 228
Score = 137 (53.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 64/249 (25%), Positives = 101/249 (40%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
T GH + V+SV FS + R + S S D T++ W+ L +C+ T ++E +
Sbjct: 98 TRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNT-----LGECKYT-----ISEADG 147
Query: 163 TKTLADVLPLDTLNT--EEVVDIVYQKQAVFQVRPVTRCT--SSMPGHAEAVISVKFSPN 218
K + NT +V + K +V + C +++ GH+ + +V SP+
Sbjct: 148 HKEWVSCVRFSP-NTLVPTIVSASWDKTV--KVWNLQNCKLRNTLAGHSGYLNTVAVSPD 204
Query: 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEG----H-------KHWVLCIA-------WSPD 260
G ASG D + WD+ L+ E H ++W LC A W +
Sbjct: 205 GSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYW-LCAATENSIRIWDLE 263
Query: 261 SKQLVSGCK---NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK 317
SK +V K D STG IG + + T+L+W S
Sbjct: 264 SKSVVEDLKVDLKAEAEKTDGSTG--IGNKTK--VIYCTSLNWSA-----DGNTLFSGYT 314
Query: 318 DGAIRIWDV 326
DG IR+W +
Sbjct: 315 DGVIRVWGI 323
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 257 (95.5 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 73/263 (27%), Positives = 121/263 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPY-LFYVNETEIT 163
++ GH V+SV S NG AS S D +R WD+ T + + P + V + +
Sbjct: 59 TLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDS 118
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
K +A L +N +F V + S+ + ++S+ +SP+G+ LA
Sbjct: 119 KYIATGSHLGKVN-------------IFGVESGKK-EHSLDTRGKFILSIAYSPDGKYLA 164
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
SG+ D + +D+ T L EGH + + +SPDS+ LV+ +G I +D
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Query: 284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT 343
G + GH W+ ++++ P H F SS D +I++WD CV H V
Sbjct: 225 AGT-LSGHGSWVLSVAFSPDD-TH----FVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVW 278
Query: 344 CIRWGGSGL-IYSASQDRTIKVW 365
+++ +G I SA DR I ++
Sbjct: 279 SVKYNPTGSKIVSAGDDRAIHIY 301
Score = 244 (91.0 bits), Expect = 7.5e-20, P = 7.5e-20
Identities = 75/265 (28%), Positives = 126/265 (47%)
Query: 318 DGAIRIW---DVILSQCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVMC 373
D +++W D L + L H V + +G I S+S D I++W G
Sbjct: 41 DDLVKVWKWSDEKL-ELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQI 99
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK-HAL---AKYQ---AQC 426
++++ T+A S D + AT + K + E K H+L K+ A
Sbjct: 100 KSMDAGPVDAWTVAFSPD--SKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYS 157
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+G+ L SG+ D + +++ K L + GH I + FSPD +++ +AS D IK+
Sbjct: 158 PDGKYLASGAIDGIINIFDIATGKL-LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKI 216
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
+D + TL GH V VA+S D VS S+D ++KVW+ ++ H D+
Sbjct: 217 YDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQ 276
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
V++V + P G K+ S G D+ + ++
Sbjct: 277 VWSVKYNPTGSKIVSAGDDRAIHIY 301
Score = 178 (67.7 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 66/306 (21%), Positives = 130/306 (42%)
Query: 237 TTQTPLFKCE-GHKHWVLCIAWSPDSKQ----LVSGCKNGVIHAWDSSTGK-QIGQPMRG 290
T + LFK E H+ + AW K +V+G + ++ W S K ++ + G
Sbjct: 3 TQYSILFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEG 62
Query: 291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-G 349
H+ + +++ ++ ASS D IR+WD+ + ++ + + + +
Sbjct: 63 HQLGVVSVN-----ISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPD 117
Query: 350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDP 408
S I + S + ++ G +L+ ++ ++A S D G +D
Sbjct: 118 SKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 409 ANPE---ESSKHALA-KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN 464
A + HA+ + P+ + LV+ SDD + +++ + + ++GH +
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA-GTLSGHGSWVL 236
Query: 465 CVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524
V FSPD S+S DKSIK+WD + T H V+ V ++ +VS D
Sbjct: 237 SVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDR 296
Query: 525 TLKVWN 530
+ +++
Sbjct: 297 AIHIYD 302
Score = 152 (58.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 36/124 (29%), Positives = 60/124 (48%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GHA + S+ FSP+ + L + S D ++ +DV GH WVL +A+SPD
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDD 244
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
VS + I WD+S+ + H+ + ++ + P + S+G D AI
Sbjct: 245 THFVSSSSDKSIKVWDTSSRSCVNT-FFDHQDQVWSVKYNPTG-----SKIVSAGDDRAI 298
Query: 322 RIWD 325
I+D
Sbjct: 299 HIYD 302
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 280 (103.6 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 84/290 (28%), Positives = 129/290 (44%)
Query: 295 ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LI 353
+T+L W N A+ DG RIW + L H + ++W G I
Sbjct: 413 VTSLDW-----NCDGSLLATGSYDGYARIWKTD-GRLASTLGQHKGPIFALKWNKCGNYI 466
Query: 354 YSASQDRTIKVWRASDGVMCRTLEGHA------HWVNTLAL---STDYLMRVEATSTGGF 404
SA D+T +W AS G + H+ W A STD R+ G
Sbjct: 467 LSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTD--QRIHVCRLG-- 522
Query: 405 KYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN 464
+P + + + + CP+G+ L S SDD TL +W+ +++ + H + I
Sbjct: 523 VNEPIKTFKGHTNEVNAIK-WCPQGQLLASCSDDMTLKIWSMNRDR-CCHDLQAHSKEIY 580
Query: 465 CVEFSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR 515
+++SP G I+ASASFD +++LWD G I TL H + VY VA+S D +
Sbjct: 581 TIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGK 640
Query: 516 LLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
L SGS D + +W+ +T ++ G G ++ V W G KV + D
Sbjct: 641 HLASGSFDKCVHIWSTQTGQLVHSYKGTGG-IFEVCWNSKGTKVGASASD 689
Score = 218 (81.8 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 60/264 (22%), Positives = 121/264 (45%)
Query: 326 VILSQCVR---VLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
++L C++ + VT + W G L+ + S D ++W+ +DG + TL H
Sbjct: 394 LVLRHCIQKGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWK-TDGRLASTLGQHKG 452
Query: 382 WVNTLALST--DYLMRVEATSTGGFKYDPAN---PEESSKHALAKYQAQCPEGEKLVSGS 436
+ L + +Y++ T +D + ++ + H+ + S S
Sbjct: 453 PIFALKWNKCGNYILSAGVDKTT-IIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCS 511
Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496
D + + + + GH +N +++ P G+++AS S D ++K+W +
Sbjct: 512 TDQRIHVCRLGVNEP-IKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCH 570
Query: 497 TLRGHVQAVYMVAWS---------SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
L+ H + +Y + WS + + +L S S DST+++W+++ L H + V
Sbjct: 571 DLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPV 630
Query: 548 YAVDWAPDGEKVASGGKDKVLRLW 571
Y+V ++PDG+ +ASG DK + +W
Sbjct: 631 YSVAFSPDGKHLASGSFDKCVHIW 654
Score = 211 (79.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 71/296 (23%), Positives = 120/296 (40%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH V ++P+ LASGSGD+T R WD++ + E+
Sbjct: 353 GHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSN-K 411
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQV-RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGS 226
DV LD N + + ++ + R S++ H + ++K++ G + S
Sbjct: 412 DVTSLDW-NCDGSLLATGSYDGYARIWKTDGRLASTLGQHKGPIFALKWNKCGNYILSAG 470
Query: 227 GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV-IHAWDSSTGKQIG 285
D T WD +T + H L + W + Q + C IH + I
Sbjct: 471 VDKTTIIWDASTGQCTQQFAFHSAPALDVDWQ--TNQAFASCSTDQRIHVCRLGVNEPI- 527
Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI 345
+ +GH + A+ W P Q + AS D ++IW + +C L +H++ + I
Sbjct: 528 KTFKGHTNEVNAIKWCP-----QGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTI 582
Query: 346 RWGGSG----------LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+W +G ++ SAS D T+++W G TL H V ++A S D
Sbjct: 583 KWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPD 638
Score = 160 (61.4 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 57/235 (24%), Positives = 98/235 (41%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
+CT H+ + V + N ++ AS S D + + P+ +G + NE
Sbjct: 484 QCTQQFAFHSAPALDVDWQTN-QAFASCSTDQRIHVCRLGVNEPIKTFKG-----HTNEV 537
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
K L + + + + I + RC + H++ + ++K+SP G
Sbjct: 538 NAIKWCPQGQLLASCSDDMTLKIWSMNR--------DRCCHDLQAHSKEIYTIKWSPTGP 589
Query: 221 S---------LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG 271
LAS S D+TVR WDV + + H V +A+SPD K L SG +
Sbjct: 590 GTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDK 649
Query: 272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+H W + TG Q+ +G I + W N + + +S DG++ + D+
Sbjct: 650 CVHIWSTQTG-QLVHSYKG-TGGIFEVCW-----NSKGTKVGASASDGSVFVLDL 697
Score = 153 (58.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 52/244 (21%), Positives = 101/244 (41%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWDV----------ILSQCVR--- 333
+RGH+ + +W P R +SG D RIWD+ +L C++
Sbjct: 351 LRGHESEVFICAWNP------SRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGG 404
Query: 334 VLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST-- 390
+ VT + W G L+ + S D ++W+ +DG + TL H + L +
Sbjct: 405 AEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWK-TDGRLASTLGQHKGPIFALKWNKCG 463
Query: 391 DYLMRVEATSTGGFKYDPAN---PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
+Y++ T +D + ++ + H+ + S S D + +
Sbjct: 464 NYILSAGVDKTT-IIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRLG 522
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ + GH +N +++ P G+++AS S D ++K+W + L+ H + +Y
Sbjct: 523 VNEP-IKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYT 581
Query: 508 VAWS 511
+ WS
Sbjct: 582 IKWS 585
Score = 135 (52.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 58/267 (21%), Positives = 96/267 (35%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R S++ H + ++K++ G + S D T WD +T +C + F+
Sbjct: 442 RLASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDASTG----QCT-QQFAFHS--- 493
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVR-PVTRCTSSMPGHAEAVISVKFSPNG 219
A L +D T + Q + R V + GH V ++K+ P G
Sbjct: 494 ------APALDVDW-QTNQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQG 546
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ---------LVSGCKN 270
+ LAS S D T++ W + + H + I WSP L S +
Sbjct: 547 QLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFD 606
Query: 271 GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ 330
+ WD G I + H + + ++++ P + AS D + IW Q
Sbjct: 607 STVRLWDVERGSCI-HTLTKHTEPVYSVAFSP-----DGKHLASGSFDKCVHIWSTQTGQ 660
Query: 331 CVRVLTSHTRSVTCIRWGGSGLIYSAS 357
V T + + W G AS
Sbjct: 661 LVHSYKG-TGGIFEVCWNSKGTKVGAS 686
Score = 125 (49.1 bits), Expect = 0.00027, P = 0.00027
Identities = 41/164 (25%), Positives = 71/164 (43%)
Query: 427 PEGEKLVSGSDDFTLFLW-----NPEKEKKSLAR--MTGHQQL-----INCVEFSPDGRI 474
P + L SGS D T +W N + L G ++ + ++++ DG +
Sbjct: 365 PSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNCDGSL 424
Query: 475 IASASFDKSIKLW--DGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
+A+ S+D ++W DGR+ +TL H ++ + W+ ++S D T +W+
Sbjct: 425 LATGSYDGYARIWKTDGRLA---STLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDAS 481
Query: 533 TKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK---VLRLWQN 573
T + Q H VDW + + AS D+ V RL N
Sbjct: 482 TGQCTQQFAFHSAPALDVDWQTN-QAFASCSTDQRIHVCRLGVN 524
Score = 123 (48.4 bits), Expect = 0.00044, P = 0.00044
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK-----------IEQ---DLPGH 543
LRGH V++ AW+ LL SGS DST ++W+M I++ ++P +
Sbjct: 351 LRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSN 410
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
D V ++DW DG +A+G D R+W+
Sbjct: 411 KD-VTSLDWNCDGSLLATGSYDGYARIWK 438
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 271 (100.5 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 85/308 (27%), Positives = 139/308 (45%)
Query: 189 AVFQVRPVTRCTSS------MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 242
A+ Q P RC+S + GH V KF PNG +LAS D + W+V
Sbjct: 43 ALLQAGP-PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDN 101
Query: 243 FKC-EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWE 301
+ +GH V+ + ++ D L S + + WDS TG+++ + ++GH ++ S
Sbjct: 102 YATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--SCY 158
Query: 302 PFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDR 360
P Q + DG +++WD+ ++ +T V + + S I S D
Sbjct: 159 PARRGPQL--VCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDN 215
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTD--YLMRVEATSTGG-FKYDPANPEE---- 413
IKVW + T+ GHA V L+LS++ YL+ +T + P P+E
Sbjct: 216 DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVK 275
Query: 414 ---SSKHALAKYQAQC---PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE 467
+ H K +C P+G K+ +GS D +++W+ ++ L ++ GH IN V
Sbjct: 276 IFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS-RRILYKLPGHAGSINEVA 334
Query: 468 FSPDGRII 475
F PD II
Sbjct: 335 FHPDEPII 342
Score = 243 (90.6 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 75/256 (29%), Positives = 124/256 (48%)
Query: 332 VRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRA-SDGVMCRTLEGHAHWVNTLALS 389
+ +L+ H V C ++ +G + SA DR I +W D TL+GH+ V L +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 118
Query: 390 TDYLMRVEATSTGGFK-YDPANPEESSK-HALAKYQAQC-P--EGEKLV-SGSDDFTLFL 443
TD M A++ +D E + + C P G +LV +GSDD T+ L
Sbjct: 119 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 178
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ K K ++ Q++ V F+ I S D IK+WD R K T+RGH
Sbjct: 179 WDIRK-KAAIQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 236
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKT----KKIEQDLPG--HGDE--VYAVDWAPD 555
+V ++ SS+ L+S + D+T++VW+++ ++ + G H E + W+PD
Sbjct: 237 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 296
Query: 556 GEKVASGGKDKVLRLW 571
G K+A+G D+ + +W
Sbjct: 297 GSKIAAGSADRFVYVW 312
Score = 228 (85.3 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 69/277 (24%), Positives = 127/277 (45%)
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQC--VRVLTSHTRSVTCIRWGGSG-LIYSASQD 359
FH N AS+G D I +W+V C L H+ +V + + G +++SAS D
Sbjct: 74 FHPNGST--LASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTD 130
Query: 360 RTIKVWRASDGVMCRTLEGHAHWVNTL--ALSTDYLMRVEATSTGGFKYDPANPEESSKH 417
+T+ VW + G + L+GH +VN+ A L+ + G K + + +
Sbjct: 131 KTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV-CTGSDDGTVKLWDIRKKAAIQT 189
Query: 418 ALAKYQAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR 473
YQ ++++SG D + +W+ + K + M GH + + S +G
Sbjct: 190 FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGS 248
Query: 474 IIASASFDKSIKLWDGRI----GKFITTLRGHV----QAVYMVAWSSDSRLLVSGSADST 525
+ S + D ++++WD R + + +G+V + + +WS D + +GSAD
Sbjct: 249 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 308
Query: 526 LKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASG 562
+ VW+ +++I LPGH + V + PD + +G
Sbjct: 309 VYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIETG 345
Score = 173 (66.0 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 79/315 (25%), Positives = 128/315 (40%)
Query: 92 AVFQVRPVTRCTSS------MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 145
A+ Q P RC+S + GH V KF PNG +LAS D + W+V
Sbjct: 43 ALLQAGP-PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD--- 98
Query: 146 FKCEGTPYLFYVNETEITKTL---ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS 202
C+ Y + L D L + +T++ V V+ + +V+
Sbjct: 99 --CDN--YATLKGHSGAVMELHYNTDGSMLFSASTDKTV-AVWDSETGERVK-------R 146
Query: 203 MPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
+ GH V S + G L +GS D TV+ WD+ + + + + + VL + ++ S
Sbjct: 147 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTS 205
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
Q++SG + I WD K + MRGH +T LS ++ + +
Sbjct: 206 DQIISGGIDNDIKVWDLRQNK-LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Query: 322 RIWDVILSQCVRVLTS--HTRSVTCIR--WGGSGL-IYSASQDRTIKVWRASDGVMCRTL 376
R + +CV++ H +R W G I + S DR + VW + + L
Sbjct: 265 RPF-APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKL 323
Query: 377 EGHAHWVNTLALSTD 391
GHA +N +A D
Sbjct: 324 PGHAGSINEVAFHPD 338
Score = 120 (47.3 bits), Expect = 0.00043, P = 0.00043
Identities = 39/159 (24%), Positives = 69/159 (43%)
Query: 113 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPL 172
V++V F+ + SG D ++ WD+ + G + V ++ + +L
Sbjct: 196 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG--HADSVTGLSLSSEGSYLLSN 253
Query: 173 DTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHA----EAVISVKFSPNGRSLASGSGD 228
NT V D+ F P RC G+ + ++ +SP+G +A+GS D
Sbjct: 254 AMDNTVRVWDV-----RPFA--PKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSAD 306
Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG 267
V WD T++ L+K GH + +A+ PD + +G
Sbjct: 307 RFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIETG 345
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 256 (95.2 bits), Expect = 3.7e-21, P = 3.7e-21
Identities = 74/253 (29%), Positives = 132/253 (52%)
Query: 334 VLTSHTRSVTCIRW--GGSGLIYSASQDRTIKVWRA-----SDGVMCRTLEGHAHWVNTL 386
++ +HT VT I S +I +AS+D++I +W+ S GV R L GH+H+V +
Sbjct: 10 IMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDV 69
Query: 387 ALSTDYLMRVEATSTGGFK-YDPANPEESSK---HALAKYQ-AQCPEGEKLVSGSDDFTL 441
LS+D + + G + +D A E + + H A + ++VS S D T+
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTI 129
Query: 442 FLWNPEKE-KKSLARMTGHQQLINCVEFSPDGRI--IASASFDKSIKLWDGRIGKFITTL 498
LWN E K +++ GH++ ++CV FSP+ + I SAS+DK++K+W+ + K +L
Sbjct: 130 KLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSL 189
Query: 499 RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK 558
GH + VA S D L SG D + +W++ K L G ++++ ++P+
Sbjct: 190 VGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-GSIIHSLCFSPNRYW 248
Query: 559 VASGGKDKVLRLW 571
+ + ++ + R+W
Sbjct: 249 LCAATENSI-RIW 260
Score = 185 (70.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 51/199 (25%), Positives = 92/199 (46%)
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
+ GH+ V V S +G+ SGS D +R WD+ T + GH VL +A+S D++
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 263 QLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
Q+VS ++ I W++ K GHK+W++ + + P N S+ D +
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSP---NTLVPTIVSASWDKTV 175
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++W++ + L H+ + + G L S +D I +W ++G +LE +
Sbjct: 176 KVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS 235
Query: 381 HWVNTLALSTDYLMRVEAT 399
+++L S + AT
Sbjct: 236 I-IHSLCFSPNRYWLCAAT 253
Score = 172 (65.6 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 44/171 (25%), Positives = 84/171 (49%)
Query: 200 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP--LFKCEGHKHWVLCIAW 257
T GH + V+SV FS + R + S S D T++ W+ + + + +GHK WV C+ +
Sbjct: 98 TRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRF 157
Query: 258 SPDS--KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS 315
SP++ +VS + + W+ K + + GH ++ ++ P C AS
Sbjct: 158 SPNTLVPTIVSASWDKTVKVWNLQNCK-LRNSLVGHSGYLNTVAVSPD--GSLC---ASG 211
Query: 316 GKDGAIRIWDVILSQCVRVLTSHTRSVT-CIRWGGSGLIYSASQDRTIKVW 365
GKDG I +WD L++ ++ + S+ + + + A+ + +I++W
Sbjct: 212 GKDGVILLWD--LAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIW 260
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 54/185 (29%), Positives = 84/185 (45%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
+ GH+ V V S +G+ SGS D +R WD+ T G +V T+
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAT--------GETTRRFVGHTK---- 106
Query: 166 LADVLPLD-TLNTEEVVDIVYQKQAVFQVRPVTRCT---SSMPGHAEAVISVKFSPNGR- 220
DVL + + + ++V + + + + C S GH E V V+FSPN
Sbjct: 107 --DVLSVAFSTDNRQIVS-ASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLV 163
Query: 221 -SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
++ S S D TV+ W++ GH ++ +A SPD SG K+GVI WD +
Sbjct: 164 PTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLA 223
Query: 280 TGKQI 284
GK++
Sbjct: 224 EGKKL 228
Score = 149 (57.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 48/149 (32%), Positives = 69/149 (46%)
Query: 205 GHAEAVISVKFSPNGR--SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
GH E V V+FSPN ++ S S D TV+ W++ GH ++ +A SPD
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGS 206
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
SG K+GVI WD + GK++ G I +L + P N R + + + +IR
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAG--SIIHSLCFSP---N---RYWLCAATENSIR 258
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSG 351
IWD+ V L +S GG G
Sbjct: 259 IWDLESKSVVEDLKVDLKSEAEKNEGGVG 287
Score = 137 (53.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
T GH + V+SV FS + R + S S D T++ W+ + EG + +V+
Sbjct: 98 TRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRF 157
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT--SSMPGHAEAVISVKFSPNGR 220
+ P +TL +V + K +V + C +S+ GH+ + +V SP+G
Sbjct: 158 S-------P-NTL-VPTIVSASWDKTV--KVWNLQNCKLRNSLVGHSGYLNTVAVSPDGS 206
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCE-GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
ASG D + WD+ L+ E G LC +SP+ L + +N I WD
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLC--FSPNRYWLCAATENS-IRIWD 261
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 248 (92.4 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 82/300 (27%), Positives = 127/300 (42%)
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
G + +K +T+L W N A DG RIW L H +
Sbjct: 229 GHDVPSNKD-VTSLDW-----NSDGTLLAMGSYDGFARIWTEN-GNLASTLGQHKGPIFA 281
Query: 345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA------HWVNTLAL---STDYLM 394
++W G + SA D+T +W A G + H+ W N + STD +
Sbjct: 282 LKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCI 341
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
V G + P + + + + P G L S SDD TL +W+ K+ +
Sbjct: 342 HVCRL---GCDH-PVKTFQGHTNEVNAIKWD-PSGMLLASCSDDMTLKIWSM-KQDACVH 395
Query: 455 RMTGHQQLINCVEFSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ H + I +++SP G ++ASASFD +++LWD G TL H + V
Sbjct: 396 DLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPV 455
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
Y VA+S D + L SGS D + +WN ++ + G G ++ V W G+KV + D
Sbjct: 456 YSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGG-IFEVCWNARGDKVGASASD 514
Score = 214 (80.4 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 63/265 (23%), Positives = 116/265 (43%)
Query: 326 VILSQCVRVLTSH----TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
++L C+R H + VT + W G L+ S D ++W +G + TL H
Sbjct: 219 LVLRHCIRE-GGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIW-TENGNLASTLGQHK 276
Query: 381 HWVNTLALST--DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSG 435
+ L + +Y++ T +D E + H+ S
Sbjct: 277 GPIFALKWNKKGNYVLSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASC 335
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI 495
S D + + + + GH +N +++ P G ++AS S D ++K+W + +
Sbjct: 336 STDMCIHVCRLGCDHP-VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACV 394
Query: 496 TTLRGHVQAVYMVAWS---------SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
L+ H + +Y + WS + S +L S S DST+++W+++ L H +
Sbjct: 395 HDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEP 454
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
VY+V ++PDG+ +ASG DK + +W
Sbjct: 455 VYSVAFSPDGKYLASGSFDKYVHIW 479
Score = 156 (60.0 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 57/206 (27%), Positives = 82/206 (39%)
Query: 195 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV-------TTQTPLFKC-- 245
P + T + GH V ++P LASGSGD+T R W++ +TQ L C
Sbjct: 168 PPNKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 226
Query: 246 EG-H----KHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSW 300
EG H V + W+ D L G +G W + G + + HK I AL W
Sbjct: 227 EGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIW-TENGN-LASTLGQHKGPIFALKW 284
Query: 301 EPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR 360
N + S+G D IWD + + H+ + W + S S D
Sbjct: 285 -----NKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDM 339
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTL 386
I V R +T +GH + VN +
Sbjct: 340 CIHVCRLGCDHPVKTFQGHTNEVNAI 365
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 55/229 (24%), Positives = 96/229 (41%)
Query: 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
P H+ + V + N + AS S D + + P+ +G + NE K
Sbjct: 315 PFHSAPALDVDWQ-NNMTFASCSTDMCIHVCRLGCDHPVKTFQG-----HTNEVNAIKWD 368
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----- 221
+ L + + + + I KQ C + H++ + ++K+SP G +
Sbjct: 369 PSGMLLASCSDDMTLKIWSMKQDA--------CVHDLQAHSKEIYTIKWSPTGPATSNPN 420
Query: 222 ----LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
LAS S D+TVR WDV H+ V +A+SPD K L SG + +H W+
Sbjct: 421 SSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWN 480
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ +G + +G I + W N + + +S DG++ + D+
Sbjct: 481 TQSGSLV-HSYQG-TGGIFEVCW-----NARGDKVGASASDGSVCVLDL 522
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 34/139 (24%), Positives = 60/139 (43%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEK---------KSLARMTGHQ----QLINCVEFSPDGR 473
P + L SGS D T +WN + + R GH + + ++++ DG
Sbjct: 189 PVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGT 248
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++A S+D ++W G +TL H ++ + W+ ++S D T +W+ T
Sbjct: 249 LLAMGSYDGFARIWTEN-GNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHT 307
Query: 534 KKIEQDLPGHGDEVYAVDW 552
+ +Q P H VDW
Sbjct: 308 GEAKQQFPFHSAPALDVDW 326
Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK------------IEQ---DL 540
T LRGH V++ AW+ S LL SGS DST ++WN+ I + D+
Sbjct: 173 TVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 232
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
P + D V ++DW DG +A G D R+W
Sbjct: 233 PSNKD-VTSLDWNSDGTLLAMGSYDGFARIW 262
Score = 113 (44.8 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 38/170 (22%), Positives = 69/170 (40%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP----- 259
GH V ++K+ P+G LAS S D T++ W + + + H + I WSP
Sbjct: 357 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPAT 416
Query: 260 ----DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS 315
S L S + + WD G M+ H++ + ++++ P + AS
Sbjct: 417 SNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMK-HQEPVYSVAFSP-----DGKYLASG 470
Query: 316 GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364
D + IW+ V T + + W G + +++ D ++ V
Sbjct: 471 SFDKYVHIWNTQSGSLVHSYQG-TGGIFEVCWNARGDKVGASASDGSVCV 519
Score = 73 (30.8 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 98 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
P + T + GH V ++P LASGSGD+T R W++
Sbjct: 168 PPNKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNL 208
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 206 (77.6 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 53/152 (34%), Positives = 85/152 (55%)
Query: 424 AQCPEGEKLVSGSDDFTLFLWN-PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK 482
A P + L +GS D T LW P+ + L TGH++ + V+FSP +++A+AS D
Sbjct: 486 AVSPNDKLLATGSQDRTAKLWALPQCQL--LGVFTGHRRGLWNVQFSPTDQVLATASADG 543
Query: 483 SIKLWDGRIGKFITTLRGHVQAVYMVAW-SSDSRLLVSGSADSTLKVWNMKTKKIEQDLP 541
+IKLW + + T GH +V VA+ S S+LL SGS D LK+W +K+ + + L
Sbjct: 544 TIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGS-DGLLKLWTIKSNECVRTLD 602
Query: 542 GHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
H D+V+ + + + +GG D + LW++
Sbjct: 603 AHEDKVWGLHCSQLDDHAITGGSDSRIILWKD 634
Score = 174 (66.3 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 47/154 (30%), Positives = 78/154 (50%)
Query: 432 LVSGSDDFTLFLWN-PEKE-KKSLARMTG------------HQQLINCVEFSPDGRIIAS 477
LV+GS D T+ LW PE KS A +G H + IN + SP+ +++A+
Sbjct: 437 LVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCHDKDINSLAVSPNDKLLAT 496
Query: 478 ASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE 537
S D++ KLW + + GH + ++ V +S ++L + SAD T+K+W ++
Sbjct: 497 GSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVLATASADGTIKLWALQDFSCL 556
Query: 538 QDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ GH V V + G ++ S G D +L+LW
Sbjct: 557 KTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLW 590
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 57/263 (21%), Positives = 112/263 (42%)
Query: 93 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EG 150
VF+++ + C + GH + V+++ G AS + D ++R W + + C +G
Sbjct: 361 VFELQTLA-C-QILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWKMNKAGQV-ACVAQG 417
Query: 151 TPYLFYVNETEITKTLADVLPLD----TLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPG 205
+ + V ++ L T+ + + + K PV + ++
Sbjct: 418 SGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRC 477
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H + + S+ SPN + LA+GS D T + W + L GH+ + + +SP + L
Sbjct: 478 HDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVLA 537
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ +G I W + + GH + +++ + + SSG DG +++W
Sbjct: 538 TASADGTIKLWALQDFSCL-KTFEGHDASVLKVAFVS-----RGSQLLSSGSDGLLKLWT 591
Query: 326 VILSQCVRVLTSHTRSVTCIRWG 348
+ ++CVR L +H V WG
Sbjct: 592 IKSNECVRTLDAHEDKV----WG 610
Score = 147 (56.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 56/231 (24%), Positives = 97/231 (41%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRS-LASGSGDTTVRFWDVTTQTPLFK---CEGTPYLFYV 157
C + GH +V ++ S S L +GS D TV+ W + + L K + P L
Sbjct: 413 CVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLP-EALLAKSTAADSGPVLLQA 471
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQ-KQAVFQVRPVTRCTSSMPGHAEAVISVKFS 216
T D+ L ++++ Q + A P + GH + +V+FS
Sbjct: 472 QTTRRCHD-KDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFS 530
Query: 217 PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
P + LA+ S D T++ W + + L EGH VL +A+ QL+S +G++ W
Sbjct: 531 PTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLW 590
Query: 277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW-DV 326
+ + + + + H+ + L H + + G D I +W DV
Sbjct: 591 TIKSNECV-RTLDAHEDKVWGL-----HCSQLDDHAITGGSDSRIILWKDV 635
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 39/164 (23%), Positives = 78/164 (47%)
Query: 412 EESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD 471
E+ + + + P+ E LV+ S L W + + H + + F
Sbjct: 62 EQEDQEDITSFDLS-PDDEVLVTASRALLLAQWAWREGTVTRLWKAIHTAPVASMAFDAT 120
Query: 472 GRIIASASFDKSIKLWDGRIGKFITT--LRGHVQAVYMVAWSSD-SRLLVSGSA-DSTLK 527
++A+ D ++++WD I + T RG V++VA+ D +RLL+ SA D++++
Sbjct: 121 STLLATGGCDGAVRVWD--IVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSIR 178
Query: 528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
VW+++ + L H V ++ ++ G + S G+DK+ +W
Sbjct: 179 VWSLQDRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGRDKICIVW 222
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 65/300 (21%), Positives = 122/300 (40%)
Query: 190 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC---- 245
VF+++ + C + GH + V+++ G AS + D ++R W + + C
Sbjct: 361 VFELQTLA-C-QILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWKMNKAGQV-ACVAQG 417
Query: 246 EGHKHWV--LCIAWSPDSKQLVSGCKNGVIHAWD-------SSTGKQIGQPM-------R 289
GH H V +C + +S LV+G ++ + W ST G + R
Sbjct: 418 SGHTHSVGTICCSRLKESF-LVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRR 476
Query: 290 GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG 349
H + I +L+ P N + A+ +D ++W + Q + V T H R + +++
Sbjct: 477 CHDKDINSLAVSP---NDKL--LATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSP 531
Query: 350 SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408
+ ++ +AS D TIK+W D +T EGH V +A + + + S G K
Sbjct: 532 TDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWT 591
Query: 409 ANPEESSK----HALAKYQAQCPE-GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
E + H + C + + ++G D + LW E + ++ +
Sbjct: 592 IKSNECVRTLDAHEDKVWGLHCSQLDDHAITGGSDSRIILWKDVTEAEQAEEQAKREEQV 651
Score = 136 (52.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 83/330 (25%), Positives = 134/330 (40%)
Query: 196 VTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCI 255
VTR ++ H V S+ F LA+G D VR WD+ G V +
Sbjct: 100 VTRLWKAI--HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLV 157
Query: 256 AWSPDSKQLV--SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFA 313
A+ PD +L+ S + I W S + + H +T+LS+ H
Sbjct: 158 AFHPDPTRLLLFSSAVDTSIRVW-SLQDRSCLAVLTAHYSAVTSLSFSEG--GHT---ML 211
Query: 314 SSGKDGAIRIWDVILSQCVR---VLTSHTRSVT-------CIRWGGSGLIYSASQDRTI- 362
SSG+D +WD+ Q R V S SV + SGL + + D+ I
Sbjct: 212 SSGRDKICIVWDLQSYQTTRTVPVFESVEASVLLPEQPAPALGVKSSGLHFLTAGDQGIL 271
Query: 363 KVWRASDGVMCRT---LEGHAHWVN--TLALSTDYLMRVEATSTGGFKYDPANPEESSKH 417
+VW A+ G T + G + TLA + D L+ V A Y+ A+ + K
Sbjct: 272 RVWEAASGQCVYTQPQMPGLRQELTHCTLARAADLLLTVTADHNL-LLYE-AHSLQLQKQ 329
Query: 418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPE--K--EKKSLAR--MTGHQQLINCVEFSPD 471
A Y + + + + SD + N K E ++LA + GH ++ ++
Sbjct: 330 -FAGYSEEVLD-VRFLGPSDSHIVVASNSPCLKVFELQTLACQILHGHTDIVLALDVFRK 387
Query: 472 GRIIASASFDKSIKLWD-GRIGKFITTLRG 500
G + AS + D+SI++W + G+ +G
Sbjct: 388 GWLFASCAKDQSIRIWKMNKAGQVACVAQG 417
Score = 125 (49.1 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 89/385 (23%), Positives = 150/385 (38%)
Query: 99 VTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVN 158
VTR ++ H V S+ F LA+G D VR WD+ G+P + +
Sbjct: 100 VTRLWKAI--HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVH-- 155
Query: 159 ETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN 218
+ D P L VD + ++ Q R C + + H AV S+ FS
Sbjct: 156 ---LVAFHPD--PTRLLLFSSAVDTSIRVWSL-QDRS---CLAVLTAHYSAVTSLSFSEG 206
Query: 219 GRSLASGSGDTTVRFWDV----TTQT-PLFKC-EGH----KHWVLCIAWSPDSKQLVSGC 268
G ++ S D WD+ TT+T P+F+ E + + ++
Sbjct: 207 GHTMLSSGRDKICIVWDLQSYQTTRTVPVFESVEASVLLPEQPAPALGVKSSGLHFLTAG 266
Query: 269 KNGVIHAWDSSTGKQI-GQP-MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
G++ W++++G+ + QP M G +Q +T + L + D + +++
Sbjct: 267 DQGILRVWEAASGQCVYTQPQMPGLRQELTHCT-----LARAADLLLTVTADHNLLLYEA 321
Query: 327 ILSQCVRVLTSHTRSVTCIRWGG--SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
Q + ++ V +R+ G I AS +KV+ + C+ L GH V
Sbjct: 322 HSLQLQKQFAGYSEEVLDVRFLGPSDSHIVVASNSPCLKVFELQT-LACQILHGHTDIVL 380
Query: 385 TL-ALSTDYLMR--VEATSTGGFKYDPANP----EESSKHALAKYQAQCPEGEK--LVSG 435
L +L + S +K + A + S H + C ++ LV+G
Sbjct: 381 ALDVFRKGWLFASCAKDQSIRIWKMNKAGQVACVAQGSGHTHSVGTICCSRLKESFLVTG 440
Query: 436 SDDFTLFLWN-PEKE-KKSLARMTG 458
S D T+ LW PE KS A +G
Sbjct: 441 SQDCTVKLWPLPEALLAKSTAADSG 465
Score = 97 (39.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 28/108 (25%), Positives = 48/108 (44%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P + L + S D T+ LW + + L GH + V F G + S+ D +KL
Sbjct: 531 PTDQVLATASADGTIKLWALQ-DFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKL 589
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534
W + + + TL H V+ + S ++G +DS + +W T+
Sbjct: 590 WTIKSNECVRTLDAHEDKVWGLHCSQLDDHAITGGSDSRIILWKDVTE 637
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 277 (102.6 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 79/283 (27%), Positives = 128/283 (45%)
Query: 295 ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LI 353
+T L W N + A+ DG RIW + + + L+ H + ++W G +
Sbjct: 327 VTTLDW-----NGEGTLLATGSCDGQARIW-TLNGELISTLSKHKGPIFSLKWNKKGDYL 380
Query: 354 YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE 413
+ S DRT VW + E H+ TL + + +ST Y E
Sbjct: 381 LTGSVDRTAVVWDVKAEEWKQQFEFHSG--PTLDVDWRNNVSFATSSTDSMIYLCKIGET 438
Query: 414 SSKHALAKYQAQ--C----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE 467
+Q + C P G L S SDD T +WN K+ + + H + I +
Sbjct: 439 RPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNI-KQSTFVHDLREHTKEIYTIR 497
Query: 468 FSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV 518
+SP G +ASASFD ++KLWD +GK + + GH + VY +A+S + +
Sbjct: 498 WSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIA 557
Query: 519 SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS 561
SGS D ++ +W++K KI + G+G ++ V W +G K+A+
Sbjct: 558 SGSLDKSIHIWSIKEGKIVKTYTGNGG-IFEVCWNKEGNKIAA 599
Score = 265 (98.3 bits), Expect = 9.9e-20, P = 9.9e-20
Identities = 70/248 (28%), Positives = 119/248 (47%)
Query: 339 TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST--DYLMR 395
++ VT + W G G L+ + S D ++W + G + TL H + +L + DYL+
Sbjct: 324 SKDVTTLDWNGEGTLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGDYLLT 382
Query: 396 VEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
T +D E + H+ + S D ++L E +
Sbjct: 383 GSVDRTA-VVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIG-ETRP 440
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
TGHQ +NCV++ P G ++AS S D + K+W+ + F+ LR H + +Y + WS
Sbjct: 441 AKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSP 500
Query: 513 --------DSRL-LVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ +L L S S DST+K+W+ + K+ GH + VY++ ++P+GE +ASG
Sbjct: 501 TGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGS 560
Query: 564 KDKVLRLW 571
DK + +W
Sbjct: 561 LDKSIHIW 568
Score = 212 (79.7 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 76/300 (25%), Positives = 123/300 (41%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT-----PYLFYVNET 160
+ GH V + +SP+ LASGSGD T R W + + FK T + +
Sbjct: 261 LEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGS--FKAVHTGRNINALILKHAKG 318
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFSPNG 219
+ + DV LD N E + ++ + S++ H + S+K++ G
Sbjct: 319 KSNEKSKDVTTLDW-NGEGTLLATGSCDGQARIWTLNGELISTLSKHKGPIFSLKWNKKG 377
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
L +GS D T WDV + + E H L + W ++ + + +I+
Sbjct: 378 DYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDSMIYLCKIG 436
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT 339
+ + GH+ + + W+P AS D +IW++ S V L HT
Sbjct: 437 ETRP-AKTFTGHQGEVNCVKWDPTG-----SLLASCSDDSTAKIWNIKQSTFVHDLREHT 490
Query: 340 RSVTCIRWGGSG----------LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
+ + IRW +G + SAS D T+K+W A G M + GH V +LA S
Sbjct: 491 KEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFS 550
Score = 177 (67.4 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 64/257 (24%), Positives = 112/257 (43%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
S++ H + S+K++ G L +GS D T WDV + +K + + F+ T +
Sbjct: 359 STLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEE--WKQQ---FEFHSGPT-LD 412
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
+ + T +T+ ++ + + + RP T GH V VK+ P G LA
Sbjct: 413 VDWRNNVSFATSSTDSMIYLC----KIGETRPAKTFT----GHQGEVNCVKWDPTGSLLA 464
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD-------SKQLV--SGCKNGVIH 274
S S D+T + W++ T + H + I WSP +KQL S + +
Sbjct: 465 SCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVK 524
Query: 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV 334
WD+ GK + GH++ + +L++ P N + AS D +I IW + + V+
Sbjct: 525 LWDAELGKMLCS-FNGHREPVYSLAFSP---NGEY--IASGSLDKSIHIWSIKEGKIVKT 578
Query: 335 LTSHTRSVTCIRWGGSG 351
T + + + W G
Sbjct: 579 YTGNG-GIFEVCWNKEG 594
Score = 142 (55.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 41/163 (25%), Positives = 75/163 (46%)
Query: 424 AQCPEGEKLVSGSDDFTLFLWN-PEKEKKSL-------ARMTGH--------QQLINCVE 467
A P L SGS D T +W+ PE K++ A + H + + ++
Sbjct: 272 AWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEKSKDVTTLD 331
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527
++ +G ++A+ S D ++W G+ I+TL H ++ + W+ L++GS D T
Sbjct: 332 WNGEGTLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAV 390
Query: 528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL 570
VW++K ++ +Q H VDW + A+ D ++ L
Sbjct: 391 VWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDSMIYL 432
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 43/173 (24%), Positives = 76/173 (43%)
Query: 100 TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-EGTPYLFYVN 158
TR + GH V VK+ P G LAS S D+T + W++ T + E T ++ +
Sbjct: 438 TRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIR 497
Query: 159 ETEI---TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKF 215
+ T L L + + + V + + + + + S GH E V S+ F
Sbjct: 498 WSPTGPGTNNPNKQLTLASASFDSTVKL-WDAE-------LGKMLCSFNGHREPVYSLAF 549
Query: 216 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC 268
SPNG +ASGS D ++ W + + + K + + W+ + + ++ C
Sbjct: 550 SPNGEYIASGSLDKSIHIWSIK-EGKIVKTYTGNGGIFEVCWNKEGNK-IAAC 600
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 225 (84.3 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 61/200 (30%), Positives = 104/200 (52%)
Query: 384 NTLALSTDYLMRVEA-TSTGGFKYDPANPEESSKHALAKY-QAQC--PEGEKLVSGSDDF 439
NT+ +T + A TS D N SS + Y ++ C P+G+ L +G++D
Sbjct: 406 NTMTTTTTTTITTTAMTSAAELAKDVENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDR 465
Query: 440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR 499
+ +W+ E +K + + GH+Q I +++ P G + S S D+++++WD R G+ TL
Sbjct: 466 LIRIWDIEN-RKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 524
Query: 500 GHVQAVYMVAWS-SDSRLLVSGSADSTLKVWNMKTKKIEQDLP-------GHGDEVYAVD 551
V VA S D + + +GS D ++VW+ +T + + L GH D VY+V
Sbjct: 525 IE-DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVV 583
Query: 552 WAPDGEKVASGGKDKVLRLW 571
+ DG+ V SG D+ ++LW
Sbjct: 584 FTRDGQSVVSGSLDRSVKLW 603
Score = 212 (79.7 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 65/232 (28%), Positives = 114/232 (49%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
+ GH + + S+ + P+G L SGSGD TVR WD+ T +C T + T + +
Sbjct: 481 LQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG----QCSLTLSI-EDGVTTVAVS 535
Query: 166 LADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG 225
D + + + V V+ + F V + S GH ++V SV F+ +G+S+ SG
Sbjct: 536 PGDGKYIAAGSLDRAVR-VWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 594
Query: 226 SGDTTVRFWDVT-------TQTPLF-KCE----GHKHWVLCIAWSPDSKQLVSGCKNGVI 273
S D +V+ W++ ++TP CE GHK +VL +A + + + ++SG K+ +
Sbjct: 595 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV 654
Query: 274 HAWDSSTGKQIGQPMRGHKQWITALSW-EPFHLNHQCRRFASSGKDGAIRIW 324
WD +G + ++GH+ + +++ L + FA+ D RIW
Sbjct: 655 LFWDKKSGNPLLM-LQGHRNSVISVAVANGSPLGPEYNVFATGSGDCKARIW 705
Score = 202 (76.2 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 53/165 (32%), Positives = 84/165 (50%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIK 485
P G+KLVSGS D T+ +W+ + SL + + V SP DG+ IA+ S D++++
Sbjct: 495 PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI--EDGVTTVAVSPGDGKYIAAGSLDRAVR 552
Query: 486 LWDGRIGKFITTL-------RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT--KKI 536
+WD G + L GH +VY V ++ D + +VSGS D ++K+WN++ K
Sbjct: 553 VWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKS 612
Query: 537 EQDLP----------GHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ P GH D V +V + E + SG KD+ + W
Sbjct: 613 DSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFW 657
Score = 201 (75.8 bits), Expect = 6.5e-21, Sum P(2) = 6.5e-21
Identities = 72/268 (26%), Positives = 111/268 (41%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTT--VRFWDVTTQTPLFK-CEGTPYLFYVNETEITKT 165
H V VKFS +G LA+G TT R D + L + + E T T
Sbjct: 343 HTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANNHRNSITENNTT-T 401
Query: 166 LADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG 225
D + T T + A TSS P + SV FSP+G+ LA+G
Sbjct: 402 STDNNTMTTTTTTTITTTAMTSAAELAKDVENLNTSSSPSSDLYIRSVCFSPDGKFLATG 461
Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285
+ D +R WD+ + + +GH+ + + + P +LVSG + + WD TG Q
Sbjct: 462 AEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG-QCS 520
Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-------TSH 338
+ + +T ++ P + A+ D A+R+WD V L T H
Sbjct: 521 LTL-SIEDGVTTVAVSP----GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGH 575
Query: 339 TRSVTCIRWGGSGL-IYSASQDRTIKVW 365
SV + + G + S S DR++K+W
Sbjct: 576 KDSVYSVVFTRDGQSVVSGSLDRSVKLW 603
Score = 188 (71.2 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 39/112 (34%), Positives = 66/112 (58%)
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
I V FSPDG+ +A+ + D+ I++WD K + L+GH Q +Y + + LVSGS
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG 505
Query: 523 DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAP-DGEKVASGGKDKVLRLWQN 573
D T+++W+++T + L D V V +P DG+ +A+G D+ +R+W +
Sbjct: 506 DRTVRIWDLRTGQCSLTLSIE-DGVTTVAVSPGDGKYIAAGSLDRAVRVWDS 556
Score = 145 (56.1 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 56/210 (26%), Positives = 91/210 (43%)
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWSP-D 260
+ GH + + S+ + P+G L SGSGD TVR WD+ T Q L + V +A SP D
Sbjct: 481 LQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL--SIEDGVTTVAVSPGD 538
Query: 261 SKQLVSGCKNGVIHAWDSSTGKQI------GQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
K + +G + + WDS TG + + GHK + ++ + + S
Sbjct: 539 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF-----TRDGQSVVS 593
Query: 315 SGKDGAIRIWDVILSQCVRVLTSHT-RSVTC-IRWGG-------------SGLIYSASQD 359
D ++++W+ L S T S TC + + G I S S+D
Sbjct: 594 GSLDRSVKLWN--LQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD 651
Query: 360 RTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
R + W G L+GH + V ++A++
Sbjct: 652 RGVLFWDKKSGNPLLMLQGHRNSVISVAVA 681
Score = 127 (49.8 bits), Expect = 6.5e-21, Sum P(2) = 6.5e-21
Identities = 40/134 (29%), Positives = 61/134 (45%)
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLW---------DGRI---GKFITTLRGHVQA 504
TGH+ + V F+ DG+ + S S D+S+KLW D + G T GH
Sbjct: 573 TGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDF 632
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA------PDGEK 558
V VA + + ++SGS D + W+ K+ L GH + V +V A P+
Sbjct: 633 VLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSPLGPEYNV 692
Query: 559 VASGGKDKVLRLWQ 572
A+G D R+W+
Sbjct: 693 FATGSGDCKARIWK 706
Score = 124 (48.7 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 49/168 (29%), Positives = 78/168 (46%)
Query: 389 STDYLMRVEATSTGGF--KYDPANPEESSKHALAKYQAQCP-EGEKLVSGSDDFTLFLWN 445
S D +RV + TG + D N E + H + Y +G+ +VSGS D ++ LWN
Sbjct: 546 SLDRAVRVWDSETGFLVERLDSEN-ESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 604
Query: 446 PEK-EKKSLAR--------MT--GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF 494
+ KS ++ +T GH+ + V + + I S S D+ + WD + G
Sbjct: 605 LQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP 664
Query: 495 ITTLRGHVQAVYMVAWSSDSRL------LVSGSADSTLKVWNMKTKKI 536
+ L+GH +V VA ++ S L +GS D ++W K KKI
Sbjct: 665 LLMLQGHRNSVISVAVANGSPLGPEYNVFATGSGDCKARIW--KYKKI 710
Score = 63 (27.2 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 338 HTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
HT V C+++ G + ++T +V+R SDG + L
Sbjct: 343 HTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARL 381
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 231 (86.4 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 50/148 (33%), Positives = 79/148 (53%)
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
E L +G + + LW+ ++ LA ++GH Q + V+F P GR +ASAS D S +LW
Sbjct: 270 ESVNLATGGAEGQVNLWSLSQDTP-LATLSGHTQRVCRVDFHPSGRFLASASEDTSWRLW 328
Query: 488 DGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD-- 545
D + GH + V+ V+++ D LL S DS ++W+++T + L GH D
Sbjct: 329 DVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGH 388
Query: 546 --EVYAVDWAPDGEKVASGGKDKVLRLW 571
+YA+DW DG +V S D ++ W
Sbjct: 389 IKPIYALDWGSDGHRVLSASADGWIKCW 416
Score = 227 (85.0 bits), Expect = 7.2e-21, Sum P(2) = 7.2e-21
Identities = 71/244 (29%), Positives = 115/244 (47%)
Query: 114 ISV-KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-----TPYLFYVNET-EITKTL 166
IS+ + SPNG ++A+G+ V+ + + G + ++ T + +
Sbjct: 209 ISITRISPNGETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGATLQESNVS 268
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGS 226
A+ + L T E V++ ++ Q P+ +++ GH + V V F P+GR LAS S
Sbjct: 269 AESVNLATGGAEGQVNL----WSLSQDTPL----ATLSGHTQRVCRVDFHPSGRFLASAS 320
Query: 227 GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI-- 284
DT+ R WDV +T L EGH V ++++ D L S ++ + WD TG+ I
Sbjct: 321 EDTSWRLWDVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMI 380
Query: 285 -GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT 343
M GH + I AL W R S+ DG I+ WDV Q + +HT +V+
Sbjct: 381 LDGHMDGHIKPIYALDW-----GSDGHRVLSASADGWIKCWDVRKVQRTGGVGAHTSAVS 435
Query: 344 CIRW 347
+RW
Sbjct: 436 DMRW 439
Score = 202 (76.2 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 75/275 (27%), Positives = 120/275 (43%)
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+LA+G + V W ++ TPL GH V + + P + L S ++ WD
Sbjct: 273 NLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEK 332
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT- 339
++ GH + + A+S+ N AS+G+D RIWD+ + + +L H
Sbjct: 333 RTEL-LLQEGHSRGVFAVSF-----NGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMD 386
Query: 340 ---RSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMR 395
+ + + WG G + SAS D IK W + RT AH T A+S MR
Sbjct: 387 GHIKPIYALDWGSDGHRVLSASADGWIKCWDVRK--VQRTGGVGAH---TSAVSD---MR 438
Query: 396 VEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR 455
G P +E + A+ K G LVS D + +++ + + +
Sbjct: 439 WFKGLDGPLDGVPLGVDEKGQ-AMPK-----KSGTFLVSSGFDHKVNIYSAD-DWALVQS 491
Query: 456 MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
++GH + V+ S DGR I S D+++KLW GR
Sbjct: 492 LSGHTGPVASVDVSRDGRWIVSGGHDRTVKLW-GR 525
Score = 188 (71.2 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 42/130 (32%), Positives = 68/130 (52%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P G L S S+D + LW+ EK + L + GH + + V F+ DG ++ASA D ++
Sbjct: 311 PSGRFLASASEDTSWRLWDVEKRTELLLQ-EGHSRGVFAVSFNGDGSLLASAGQDSIGRI 369
Query: 487 WDGRIGKFITTLRGH----VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG 542
WD R G+ I L GH ++ +Y + W SD ++S SAD +K W+++ + +
Sbjct: 370 WDLRTGRTIMILDGHMDGHIKPIYALDWGSDGHRVLSASADGWIKCWDVRKVQRTGGVGA 429
Query: 543 HGDEVYAVDW 552
H V + W
Sbjct: 430 HTSAVSDMRW 439
Score = 127 (49.8 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 37/134 (27%), Positives = 63/134 (47%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEI 162
+++ GH + V V F P+GR LAS S DT+ R WDV +T L EG + +F V+
Sbjct: 295 ATLSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEKRTELLLQEGHSRGVFAVSFNGD 354
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL 222
LA ++ + ++ + R + M GH + + ++ + +G +
Sbjct: 355 GSLLASA-------GQDSIGRIWDLRTG---RTIMILDGHMDGHIKPIYALDWGSDGHRV 404
Query: 223 ASGSGDTTVRFWDV 236
S S D ++ WDV
Sbjct: 405 LSASADGWIKCWDV 418
Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW------ 510
T Q+ I+ SP+G +A+ ++ +KL+ LRGH V + W
Sbjct: 203 TAGQRHISITRISPNGETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGATL 262
Query: 511 -----SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
S++S L +G A+ + +W++ L GH V VD+ P G +AS +D
Sbjct: 263 QESNVSAESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASED 322
Query: 566 KVLRLW 571
RLW
Sbjct: 323 TSWRLW 328
Score = 94 (38.1 bits), Expect = 7.2e-21, Sum P(2) = 7.2e-21
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 517 LVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
LVS D + +++ + Q L GH V +VD + DG + SGG D+ ++LW
Sbjct: 469 LVSSGFDHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLW 523
Score = 93 (37.8 bits), Expect = 9.1e-21, Sum P(2) = 9.1e-21
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 472 GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
G + S+ FD + ++ + +L GH V V S D R +VSG D T+K+W
Sbjct: 466 GTFLVSSGFDHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLW 523
Score = 76 (31.8 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 314 SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDG 370
SSG D + I+ V+ L+ HT V + G I S DRT+K+W +DG
Sbjct: 471 SSGFDHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLWGRNDG 528
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 272 (100.8 bits), Expect = 9.3e-21, P = 9.3e-21
Identities = 66/232 (28%), Positives = 120/232 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + ++ S +D I+IWD +C R+LT HT SV C+++ +I + S D T++V
Sbjct: 210 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD-ERVIITGSSDSTVRV 268
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G M TL H V L + ++ + +D A+P + + + L ++
Sbjct: 269 WDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV-WDMASPTDITLRRVLVGHR 327
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +WN + + + GH++ I C+++ R++ S S
Sbjct: 328 AAVNVVDFDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 384
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW++
Sbjct: 385 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 434
Score = 233 (87.1 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 67/248 (27%), Positives = 124/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q + + ++ V C+++ ++ S +D TIK+W S R L GH V L L
Sbjct: 195 QRIHCRSETSKGVYCLQYDDQKIV-SGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQ 251
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + + +S + N E H A + G +V+ S D ++ +W+
Sbjct: 252 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAVWD 310
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W+ +F+ TL GH +
Sbjct: 311 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR 368
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 369 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 424
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 425 YDGKIKVW 432
Score = 211 (79.3 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV T L H VL + ++
Sbjct: 236 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 293
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S T + + + GH+ + + ++ ++ ++SG
Sbjct: 294 --NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 345
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W+ + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 346 -DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 403
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 404 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFR 461
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + +VS S D T+ +W+
Sbjct: 462 LQFDEFQ-IVSSSHDDTILIWD 482
Score = 194 (73.4 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 72/284 (25%), Positives = 124/284 (43%)
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + SG D T++ WD +T GH VLC+ + D + +++G + + WD +
Sbjct: 215 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN 272
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLT 336
TG+ + + H + + HL + KD +I +WD+ + RVL
Sbjct: 273 TGEMLNTLIH-HCEAV-------LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLV 324
Query: 337 SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
H +V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 325 GHRAAVNVVDFDDKYIV-SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLV-V 381
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------P 446
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 382 SGSSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLIAALDP 440
Query: 447 EKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F D I S+S D +I +WD
Sbjct: 441 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 482
Score = 149 (57.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 49/184 (26%), Positives = 81/184 (44%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QTPLFKCEGTPYLFYV 157
C + GH +V+ +++ R + +GS D+TVR WDV T T + CE +L +
Sbjct: 236 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 293
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
N +T + D + + DI ++ V GH AV V F
Sbjct: 294 NGMMVTCS-KD-RSIAVWDMASPTDITLRRVLV--------------GHRAAVNVVDF-- 335
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+ + + S SGD T++ W+ +T + GHK + C+ + + +VSG + I WD
Sbjct: 336 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWD 393
Query: 278 SSTG 281
G
Sbjct: 394 IECG 397
Score = 142 (55.0 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 362 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 417
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 418 KRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDT 477
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 478 ILIWDFL 484
Score = 51 (23.0 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 123 RSLASGSGDTTVRFWDVTT---QTPLFKCEGTPY-LFYVNETEITKTLADVLPLDTLNTE 178
+ + SG D T++ WD +T + L G+ L Y IT + + + +NT
Sbjct: 215 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTG 274
Query: 179 EVVD-IVYQKQAVFQVR 194
E+++ +++ +AV +R
Sbjct: 275 EMLNTLIHHCEAVLHLR 291
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 252 (93.8 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 84/304 (27%), Positives = 137/304 (45%)
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEP--- 302
GH + + W+ DS+ LVS ++G + WDS +T K P+R W+ ++ P
Sbjct: 53 GHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRS--SWVMTCAYAPSGS 110
Query: 303 F----HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ 358
F L++ C ++ ++G +R+ R L HT ++C R+ I ++S
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVRV--------SRELPGHTGYLSCCRFLDDNQIVTSSG 162
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPAN------- 410
D T +W G C GH V +L+LS D+ + K +D +
Sbjct: 163 DMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTF 222
Query: 411 P-EESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI---NCV 466
P ES +A+A + P G +GSDD T L++ +++ LA M H +I V
Sbjct: 223 PGHESDINAVAFF----PSGNAFATGSDDATCRLFDIRADQE-LA-MYSHDNIICGITSV 276
Query: 467 EFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTL 526
FS GR++ + D + +WD + L GH V + + D + +GS DS L
Sbjct: 277 AFSKSGRLLFAGYDDFNCNVWDSMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFL 336
Query: 527 KVWN 530
K+WN
Sbjct: 337 KIWN 340
Score = 205 (77.2 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 70/328 (21%), Positives = 139/328 (42%)
Query: 176 NTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 235
N + + + + +++ TR T + GH + ++ ++ + R+L S S D + WD
Sbjct: 26 NDTTLATVASNLEPIGRIQMRTRRT--LRGHLAKIYAMHWASDSRNLVSASQDGKLIVWD 83
Query: 236 VTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV--IHAWDSSTGK-QIGQPMRGHK 292
T + WV+ A++P + G + + I++ + G ++ + + GH
Sbjct: 84 SYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHT 143
Query: 293 QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL 352
+++ F ++Q SSG D +WD+ Q T HT V +
Sbjct: 144 GYLSCCR---FLDDNQI--VTSSG-DMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFR 197
Query: 353 IY-SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP 411
+ S + D + K+W DG+ +T GH +N +A + A +TG
Sbjct: 198 TFISGACDASAKLWDIRDGMCKQTFPGHESDINAVA----FFPSGNAFATGSDDATCRLF 253
Query: 412 EESSKHALAKYQAQ---C--------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ 460
+ + LA Y C G L +G DDF +W+ +++++ + GH
Sbjct: 254 DIRADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWDSMRQERA-GVLAGHD 312
Query: 461 QLINCVEFSPDGRIIASASFDKSIKLWD 488
++C+ + DG + + S+D +K+W+
Sbjct: 313 NRVSCLGVTEDGMAVCTGSWDSFLKIWN 340
Score = 200 (75.5 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 55/208 (26%), Positives = 98/208 (47%)
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK-HAL---AKYQAQC--- 426
RTL GH + + ++D V A+ G K + ++K HA+ + + C
Sbjct: 49 RTLRGHLAKIYAMHWASDSRNLVSASQDG--KLIVWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLA---RMTGHQQLINCVEFSPDGRIIASASFDKS 483
P G + G D +++ + + ++ + GH ++C F D +I+ S+ D +
Sbjct: 107 PSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSG-DMT 165
Query: 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
LWD G+ T GH V ++ S D R +SG+ D++ K+W+++ +Q PGH
Sbjct: 166 CALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGH 225
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++ AV + P G A+G D RL+
Sbjct: 226 ESDINAVAFFPSGNAFATGSDDATCRLF 253
Score = 187 (70.9 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 70/299 (23%), Positives = 122/299 (40%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+RGH I A+ W R S+ +DG + +WD + V + + V +
Sbjct: 51 LRGHLAKIYAMHWAS-----DSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 348 GGSG-LIYSASQDRTIKVW--RASDGVM--CRTLEGHAHWVNTLALSTDYLMRVEATSTG 402
SG + D ++ + +G + R L GH +++ D + TS+G
Sbjct: 106 APSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQI---VTSSG 162
Query: 403 GFK---YDPANPEESSK---HALAKYQAQC-PEGEKLVSGSDDFTLFLWNPEKEKKSLAR 455
+D ++ + H P+ +SG+ D + LW+ ++
Sbjct: 163 DMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDI-RDGMCKQT 221
Query: 456 MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH---VQAVYMVAWSS 512
GH+ IN V F P G A+ S D + +L+D R + + + H + + VA+S
Sbjct: 222 FPGHESDINAVAFFPSGNAFATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSK 280
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
RLL +G D VW+ ++ L GH + V + DG V +G D L++W
Sbjct: 281 SGRLLFAGYDDFNCNVWDSMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIW 339
Score = 177 (67.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 72/316 (22%), Positives = 127/316 (40%)
Query: 79 NTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 138
N + + + + +++ TR T + GH + ++ ++ + R+L S S D + WD
Sbjct: 26 NDTTLATVASNLEPIGRIQMRTRRT--LRGHLAKIYAMHWASDSRNLVSASQDGKLIVWD 83
Query: 139 VTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTR 198
T K P T + L + + I K VR V+R
Sbjct: 84 SYTTN---KVHAIPLRSSWVMTCAYAPSGSFVACGGL--DNICSIYSLKTREGNVR-VSR 137
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
+PGH + +F + + + S SGD T WD+ T GH V+ ++ S
Sbjct: 138 ---ELPGHTGYLSCCRFLDDNQIVTS-SGDMTCALWDIETGQQCTAFTGHTGDVMSLSLS 193
Query: 259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD 318
PD + +SG + WD G Q GH+ I A+++ P FA+ D
Sbjct: 194 PDFRTFISGACDASAKLWDIRDG-MCKQTFPGHESDINAVAFFP-----SGNAFATGSDD 247
Query: 319 GAIRIWDVILSQCVRVLTSHTR--SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRT 375
R++D+ Q + + + +T + + SG L+++ D VW +
Sbjct: 248 ATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWDSMRQERAGV 307
Query: 376 LEGHAHWVNTLALSTD 391
L GH + V+ L ++ D
Sbjct: 308 LAGHDNRVSCLGVTED 323
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 274 (101.5 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 75/248 (30%), Positives = 130/248 (52%)
Query: 335 LTSHTRSVTCIRWG-GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
+ +H +V+ + G SG L+ + D + +W + +L GH V ++ L+T
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 393 LMRVEATSTGGFK-YDPANPEESSK--HALAKYQAQ-C-----PEGEKLVSGSDDFTLFL 443
+ V + +G + +D E++K L ++A C P GE + SGS D + L
Sbjct: 76 ELIVAGSQSGSIRVWDL----EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ + K + R GH Q + C+ FSPDG+ +ASA+ D ++KLWD GK ++ GH
Sbjct: 132 WDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V +V + + LL SGS+D T++ W+++ ++ + G V +V + PDG + SG
Sbjct: 191 PVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGC 250
Query: 564 KDKVLRLW 571
+D LR++
Sbjct: 251 QDS-LRVY 257
Score = 235 (87.8 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 78/304 (25%), Positives = 128/304 (42%)
Query: 109 HAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
HA V S+ +GR LA+G D V W + + G + + E +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTG-----HTSPVESVR--- 70
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPV--TRCTSSMPGHAEAVISVKFSPNGRSLASG 225
LNT E + + + +V + + ++ GH + S+ F P G +ASG
Sbjct: 71 -------LNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASG 123
Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285
S DT ++ WD+ + +F+ GH V C+ +SPD K L S + + WD + GK +
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI 345
+ GH + + FH N AS D IR WD+ Q V + V +
Sbjct: 184 E-FPGHTGPVNVVE---FHPNEYL--LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSV 237
Query: 346 RWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHW--VNTLALSTDYLMRVEATSTG 402
+ G +YS QD +++V+ + C + +W V LA+ D L+ V + +
Sbjct: 238 LFNPDGCCLYSGCQD-SLRVY-GWEPERCFDVV-LVNWGKVADLAICNDQLIGVAFSQSN 294
Query: 403 GFKY 406
Y
Sbjct: 295 VSSY 298
Score = 192 (72.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 63/229 (27%), Positives = 109/229 (47%)
Query: 57 LFYVNETEITKTLAD-VLPLDT--LNTEEVVDIVYQKQAVFQVRPV--TRCTSSMPGHAE 111
L+ +N+ +L P+++ LNT E + + + +V + + ++ GH
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
Query: 112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTLADVL 170
+ S+ F P G +ASGS DT ++ WD+ + +F+ G + + + + K LA
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 171 PLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTT 230
D +T ++ D+ K S PGH V V+F PN LASGS D T
Sbjct: 167 D-D--HTVKLWDLTAGKMM-----------SEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 231 VRFWDVTTQTPLFKC-EGHKHWVLCIAWSPDSKQLVSGCKNGV-IHAWD 277
+RFWD+ + + C EG V + ++PD L SGC++ + ++ W+
Sbjct: 213 IRFWDLE-KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 274 (101.5 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 75/248 (30%), Positives = 130/248 (52%)
Query: 335 LTSHTRSVTCIRWG-GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
+ +H +V+ + G SG L+ + D + +W + +L GH V ++ L+T
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 393 LMRVEATSTGGFK-YDPANPEESSK--HALAKYQAQ-C-----PEGEKLVSGSDDFTLFL 443
+ V + +G + +D E++K L ++A C P GE + SGS D + L
Sbjct: 76 ELIVAGSQSGSIRVWDL----EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ + K + R GH Q + C+ FSPDG+ +ASA+ D ++KLWD GK ++ GH
Sbjct: 132 WDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V +V + + LL SGS+D T++ W+++ ++ + G V +V + PDG + SG
Sbjct: 191 PVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGC 250
Query: 564 KDKVLRLW 571
+D LR++
Sbjct: 251 QDS-LRVY 257
Score = 235 (87.8 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 78/304 (25%), Positives = 128/304 (42%)
Query: 109 HAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
HA V S+ +GR LA+G D V W + + G + + E +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTG-----HTSPVESVR--- 70
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPV--TRCTSSMPGHAEAVISVKFSPNGRSLASG 225
LNT E + + + +V + + ++ GH + S+ F P G +ASG
Sbjct: 71 -------LNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASG 123
Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285
S DT ++ WD+ + +F+ GH V C+ +SPD K L S + + WD + GK +
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI 345
+ GH + + FH N AS D IR WD+ Q V + V +
Sbjct: 184 E-FPGHTGPVNVVE---FHPNEYL--LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSV 237
Query: 346 RWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHW--VNTLALSTDYLMRVEATSTG 402
+ G +YS QD +++V+ + C + +W V LA+ D L+ V + +
Sbjct: 238 LFNPDGCCLYSGCQD-SLRVY-GWEPERCFDVV-LVNWGKVADLAICNDQLIGVAFSQSN 294
Query: 403 GFKY 406
Y
Sbjct: 295 VSSY 298
Score = 192 (72.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 63/229 (27%), Positives = 109/229 (47%)
Query: 57 LFYVNETEITKTLAD-VLPLDT--LNTEEVVDIVYQKQAVFQVRPV--TRCTSSMPGHAE 111
L+ +N+ +L P+++ LNT E + + + +V + + ++ GH
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
Query: 112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTLADVL 170
+ S+ F P G +ASGS DT ++ WD+ + +F+ G + + + + K LA
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 171 PLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTT 230
D +T ++ D+ K S PGH V V+F PN LASGS D T
Sbjct: 167 D-D--HTVKLWDLTAGKMM-----------SEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 231 VRFWDVTTQTPLFKC-EGHKHWVLCIAWSPDSKQLVSGCKNGV-IHAWD 277
+RFWD+ + + C EG V + ++PD L SGC++ + ++ W+
Sbjct: 213 IRFWDLE-KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 274 (101.5 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 75/248 (30%), Positives = 130/248 (52%)
Query: 335 LTSHTRSVTCIRWG-GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
+ +H +V+ + G SG L+ + D + +W + +L GH V ++ L+T
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 393 LMRVEATSTGGFK-YDPANPEESSK--HALAKYQAQ-C-----PEGEKLVSGSDDFTLFL 443
+ V + +G + +D E++K L ++A C P GE + SGS D + L
Sbjct: 76 ELIVAGSQSGSIRVWDL----EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ + K + R GH Q + C+ FSPDG+ +ASA+ D ++KLWD GK ++ GH
Sbjct: 132 WDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V +V + + LL SGS+D T++ W+++ ++ + G V +V + PDG + SG
Sbjct: 191 PVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGC 250
Query: 564 KDKVLRLW 571
+D LR++
Sbjct: 251 QDS-LRVY 257
Score = 234 (87.4 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 69/261 (26%), Positives = 112/261 (42%)
Query: 109 HAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
HA V S+ +GR LA+G D V W + + G + + E +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTG-----HTSPVESVR--- 70
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPV--TRCTSSMPGHAEAVISVKFSPNGRSLASG 225
LNT E + + + +V + + ++ GH + S+ F P G +ASG
Sbjct: 71 -------LNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASG 123
Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285
S DT ++ WD+ + +F+ GH V C+ +SPD K L S + + WD + GK +
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI 345
+ GH + + FH N AS D IR WD+ Q V + V +
Sbjct: 184 E-FPGHTGPVNVVE---FHPNEYL--LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSV 237
Query: 346 RWGGSGL-IYSASQDRTIKVW 365
+ G +YS QD +++V+
Sbjct: 238 LFNPDGCCLYSGCQD-SLRVY 257
Score = 192 (72.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 63/229 (27%), Positives = 109/229 (47%)
Query: 57 LFYVNETEITKTLAD-VLPLDT--LNTEEVVDIVYQKQAVFQVRPV--TRCTSSMPGHAE 111
L+ +N+ +L P+++ LNT E + + + +V + + ++ GH
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
Query: 112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTLADVL 170
+ S+ F P G +ASGS DT ++ WD+ + +F+ G + + + + K LA
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 171 PLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTT 230
D +T ++ D+ K S PGH V V+F PN LASGS D T
Sbjct: 167 D-D--HTVKLWDLTAGKMM-----------SEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 231 VRFWDVTTQTPLFKC-EGHKHWVLCIAWSPDSKQLVSGCKNGV-IHAWD 277
+RFWD+ + + C EG V + ++PD L SGC++ + ++ W+
Sbjct: 213 IRFWDLE-KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 274 (101.5 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 75/248 (30%), Positives = 130/248 (52%)
Query: 335 LTSHTRSVTCIRWG-GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
+ +H +V+ + G SG L+ + D + +W + +L GH V ++ L+T
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 393 LMRVEATSTGGFK-YDPANPEESSK--HALAKYQAQ-C-----PEGEKLVSGSDDFTLFL 443
+ V + +G + +D E++K L ++A C P GE + SGS D + L
Sbjct: 76 ELIVAGSQSGSIRVWDL----EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ + K + R GH Q + C+ FSPDG+ +ASA+ D ++KLWD GK ++ GH
Sbjct: 132 WDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V +V + + LL SGS+D T++ W+++ ++ + G V +V + PDG + SG
Sbjct: 191 PVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGC 250
Query: 564 KDKVLRLW 571
+D LR++
Sbjct: 251 QDS-LRVY 257
Score = 235 (87.8 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 78/304 (25%), Positives = 128/304 (42%)
Query: 109 HAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
HA V S+ +GR LA+G D V W + + G + + E +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTG-----HTSPVESVR--- 70
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPV--TRCTSSMPGHAEAVISVKFSPNGRSLASG 225
LNT E + + + +V + + ++ GH + S+ F P G +ASG
Sbjct: 71 -------LNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASG 123
Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285
S DT ++ WD+ + +F+ GH V C+ +SPD K L S + + WD + GK +
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI 345
+ GH + + FH N AS D IR WD+ Q V + V +
Sbjct: 184 E-FPGHTGPVNVVE---FHPNEYL--LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSV 237
Query: 346 RWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHW--VNTLALSTDYLMRVEATSTG 402
+ G +YS QD +++V+ + C + +W V LA+ D L+ V + +
Sbjct: 238 LFNPDGCCLYSGCQD-SLRVY-GWEPERCFDVV-LVNWGKVADLAICNDQLIGVAFSQSN 294
Query: 403 GFKY 406
Y
Sbjct: 295 VSSY 298
Score = 192 (72.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 63/229 (27%), Positives = 109/229 (47%)
Query: 57 LFYVNETEITKTLAD-VLPLDT--LNTEEVVDIVYQKQAVFQVRPV--TRCTSSMPGHAE 111
L+ +N+ +L P+++ LNT E + + + +V + + ++ GH
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
Query: 112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTLADVL 170
+ S+ F P G +ASGS DT ++ WD+ + +F+ G + + + + K LA
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 171 PLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTT 230
D +T ++ D+ K S PGH V V+F PN LASGS D T
Sbjct: 167 D-D--HTVKLWDLTAGKMM-----------SEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 231 VRFWDVTTQTPLFKC-EGHKHWVLCIAWSPDSKQLVSGCKNGV-IHAWD 277
+RFWD+ + + C EG V + ++PD L SGC++ + ++ W+
Sbjct: 213 IRFWDLE-KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 271 (100.5 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 66/232 (28%), Positives = 120/232 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + ++ S +D I+IWD +C R+LT HT SV C+++ +I + S D T++V
Sbjct: 210 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD-ERVIITGSSDSTVRV 268
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G M TL H V L + ++ + +D A+P + + + L ++
Sbjct: 269 WDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV-WDMASPTDITLRRVLVGHR 327
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +WN + + + GH++ I C+++ R++ S S
Sbjct: 328 AAVNVVDFDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 384
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW++
Sbjct: 385 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 434
Score = 245 (91.3 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 83/297 (27%), Positives = 139/297 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D +++VSG ++ I WD ST + + + GH + L ++ R
Sbjct: 207 VYCLQY--DDQKIVSGLRDNTIKIWDKST-LECKRILTGHTGSVLCLQYDE-------RV 256
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW-RAS-- 368
+ D +R+WDV + + L H +V +R+ +G++ + S+DR+I VW AS
Sbjct: 257 IITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMASPT 315
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE-----ESSKHALAKY 422
D + R L GH VN + Y+ V A+ K ++ + E K +A
Sbjct: 316 DITLRRVLVGHRAAVNVVDFDDKYI--VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL 373
Query: 423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK 482
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++D
Sbjct: 374 QYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAYDG 427
Query: 483 SIKLWD--------GRIGKF-ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
IK+WD G + TL H V+ + + D +VS S D T+ +W+
Sbjct: 428 KIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 482
Score = 233 (87.1 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 67/248 (27%), Positives = 124/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q + + ++ V C+++ ++ S +D TIK+W S R L GH V L L
Sbjct: 195 QRIHCRSETSKGVYCLQYDDQKIV-SGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQ 251
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + + +S + N E H A + G +V+ S D ++ +W+
Sbjct: 252 YDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAVWD 310
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W+ +F+ TL GH +
Sbjct: 311 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR 368
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 369 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 424
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 425 YDGKIKVW 432
Score = 206 (77.6 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 67/262 (25%), Positives = 118/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV L H VL + ++
Sbjct: 236 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN 293
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S T + + + GH+ + + ++ ++ ++SG
Sbjct: 294 --NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 345
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W+ + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 346 -DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 403
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 404 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFR 461
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + +VS S D T+ +W+
Sbjct: 462 LQFDEFQ-IVSSSHDDTILIWD 482
Score = 200 (75.5 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 67/232 (28%), Positives = 103/232 (44%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE---GHKHWVLCIAWSPDSK 262
H EAV+ ++F+ NG + + S D ++ WD+ + T + GH+ V + + D K
Sbjct: 283 HCEAVLHLRFN-NGM-MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDK 338
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
+VS + I W++ST + + + + GHK+ I L + R S D IR
Sbjct: 339 YIVSASGDRTIKVWNTSTCEFV-RTLNGHKRGIACLQYRD-------RLVVSGSSDNTIR 390
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW--------RASDGVMC- 373
+WD+ C+RVL H V CIR+ ++ S + D IKVW RA G +C
Sbjct: 391 LWDIECGACLRVLEGHEELVRCIRFDNKRIV-SGAYDGKIKVWDLMAALDPRAPAGTLCL 449
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATST---GGFKYDPANPEESSKHALAKY 422
RTL H+ V L ++ T F DPA E + Y
Sbjct: 450 RTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPATHAEPPRSPSRTY 501
Score = 189 (71.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 71/284 (25%), Positives = 123/284 (43%)
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + SG D T++ WD +T GH VLC+ + D + +++G + + WD +
Sbjct: 215 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN 272
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLT 336
G+ + + H + + HL + KD +I +WD+ + RVL
Sbjct: 273 AGEMLNTLIH-HCEAV-------LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLV 324
Query: 337 SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
H +V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 325 GHRAAVNVVDFDDKYIV-SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLV-V 381
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------P 446
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 382 SGSSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALDP 440
Query: 447 EKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F D I S+S D +I +WD
Sbjct: 441 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 482
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 48/184 (26%), Positives = 80/184 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QTPLFKCEGTPYLFYV 157
C + GH +V+ +++ R + +GS D+TVR WDV T + CE +L +
Sbjct: 236 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN 293
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
N +T + D + + DI ++ V GH AV V F
Sbjct: 294 NGMMVTCS-KD-RSIAVWDMASPTDITLRRVLV--------------GHRAAVNVVDF-- 335
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+ + + S SGD T++ W+ +T + GHK + C+ + + +VSG + I WD
Sbjct: 336 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWD 393
Query: 278 SSTG 281
G
Sbjct: 394 IECG 397
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 271 (100.5 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 89/300 (29%), Positives = 132/300 (44%)
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
GQ + +K +T+L W N + A+ DG RIW L H +
Sbjct: 219 GQDVPSNKD-VTSLDW-----NSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFA 271
Query: 345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA------HWV--NTLA-LSTDYLM 394
++W G I SA D+T +W A G + H+ W NT A STD M
Sbjct: 272 LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTD--M 329
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
+ G + +++ K+ P G L S SDD TL +W+ K+ +
Sbjct: 330 CIHVCKLGQDRPIKTFQGHTNEVNAIKWD---PTGNLLASCSDDMTLKIWSM-KQDNCVH 385
Query: 455 RMTGHQQLINCVEFSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ H + I +++SP G ++ASASFD +++LWD G I TL H + V
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPV 445
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
Y VA+S D R L SGS D + +WN +T + G G ++ V W G+KV + D
Sbjct: 446 YSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG-IFEVCWNAAGDKVGASASD 504
Score = 218 (81.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 61/264 (23%), Positives = 116/264 (43%)
Query: 326 VILSQCVRVL---TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
++L C+R + VT + W G L+ + S D ++W DG + TL H
Sbjct: 209 LVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKG 267
Query: 382 WVNTLALST--DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSGS 436
+ L + ++++ T +D E + H+ S S
Sbjct: 268 PIFALKWNKKGNFILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCS 326
Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496
D + + +++ + GH +N +++ P G ++AS S D ++K+W + +
Sbjct: 327 TDMCIHVCKLGQDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVH 385
Query: 497 TLRGHVQAVYMVAWS---------SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
L+ H + +Y + WS + + +L S S DST+++W++ L H + V
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPV 445
Query: 548 YAVDWAPDGEKVASGGKDKVLRLW 571
Y+V ++PDG +ASG DK + +W
Sbjct: 446 YSVAFSPDGRYLASGSFDKCVHIW 469
Score = 207 (77.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 72/300 (24%), Positives = 121/300 (40%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFY---VNET-EIT 163
GH V ++P LASGSGD+T R W+++ + G+ L + E +
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENST----SGSTQLVLRHCIREGGQDV 222
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFSPNGRSL 222
+ DV LD N+E + ++ S++ H + ++K++ G +
Sbjct: 223 PSNKDVTSLDW-NSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV-IHAWDSSTG 281
S D T WD T + H L + W S + C + IH
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--SNNTFASCSTDMCIHVCKLGQD 339
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341
+ I + +GH + A+ W+P AS D ++IW + CV L +H +
Sbjct: 340 RPI-KTFQGHTNEVNAIKWDPTG-----NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKE 393
Query: 342 VTCIRWGGSG----------LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+ I+W +G ++ SAS D T+++W G+ TL H V ++A S D
Sbjct: 394 IYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD 453
Score = 157 (60.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 81/358 (22%), Positives = 147/358 (41%)
Query: 57 LFYVN-ETEITK--TLADVLPLDTLNTEEVV--DIVYQKQAVFQVRPVTRCTSSMPGHAE 111
L YV E I + TL D P+++L+ + V D+V +Q ++ + + ++ A
Sbjct: 57 LQYVEAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAA 116
Query: 112 AVISVKFSPNGRSLASG--SGDTTVRFWDVTTQTPLFKCEGT----PYLFYV---NETEI 162
A + NG + A+G +G T+ T + + +G P V +E+E+
Sbjct: 117 AASQQGSAKNGENTANGEENGAHTI----ANNHTDMMEVDGDVEIPPNKAVVLRGHESEV 172
Query: 163 T----KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTR-CT----SSMPGHAEAVISV 213
++D+L + ++ + + + + V R C +P + + V S+
Sbjct: 173 FICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKD-VTSL 231
Query: 214 KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-HKHWVLCIAWSPDSKQLVSGCKNGV 272
++ G LA+GS D R W T L G HK + + W+ ++S +
Sbjct: 232 DWNSEGTLLATGSYDGFARIW--TKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKT 289
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
WD+ TG + Q H + W+ N+ FAS D I + + + +
Sbjct: 290 TIIWDAHTG-EAKQQFPFHSAPALDVDWQS---NNT---FASCSTDMCIHVCKLGQDRPI 342
Query: 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
+ HT V I+W +G L+ S S D T+K+W L+ H + T+ S
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWS 400
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 51/244 (20%), Positives = 96/244 (39%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV-----------ILSQCVRVL- 335
+RGH+ + +W P AS D RIW++ +L C+R
Sbjct: 165 LRGHESEVFICAWNPVS-----DLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGG 219
Query: 336 --TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST-- 390
+ VT + W G L+ + S D ++W DG + TL H + L +
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKG 278
Query: 391 DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
++++ T +D E + H+ S S D + +
Sbjct: 279 NFILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLG 337
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+++ + GH +N +++ P G ++AS S D ++K+W + + L+ H + +Y
Sbjct: 338 QDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT 396
Query: 508 VAWS 511
+ WS
Sbjct: 397 IKWS 400
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/229 (24%), Positives = 93/229 (40%)
Query: 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
P H+ + V + N + AS S D + + P+ +G + NE K
Sbjct: 305 PFHSAPALDVDWQSNN-TFASCSTDMCIHVCKLGQDRPIKTFQG-----HTNEVNAIKWD 358
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----- 221
L + + + + I KQ C + H + + ++K+SP G
Sbjct: 359 PTGNLLASCSDDMTLKIWSMKQ--------DNCVHDLQAHNKEIYTIKWSPTGPGTNNPN 410
Query: 222 ----LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
LAS S D+TVR WDV + H+ V +A+SPD + L SG + +H W+
Sbjct: 411 ANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ TG + RG I + W N + +S DG++ + D+
Sbjct: 471 TQTGALV-HSYRG-TGGIFEVCW-----NAAGDKVGASASDGSVCVLDL 512
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 34/139 (24%), Positives = 63/139 (45%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKS-----LAR---MTGHQQL-----INCVEFSPDGR 473
P + L SGS D T +WN + S + R G Q + + ++++ +G
Sbjct: 179 PVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGT 238
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++A+ S+D ++W + G +TL H ++ + W+ ++S D T +W+ T
Sbjct: 239 LLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT 297
Query: 534 KKIEQDLPGHGDEVYAVDW 552
+ +Q P H VDW
Sbjct: 298 GEAKQQFPFHSAPALDVDW 316
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 57/273 (20%), Positives = 105/273 (38%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGTPYLFYVNETE 161
S++ H + ++K++ G + S D T WD T F P L + +
Sbjct: 260 STLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDV--DWQ 317
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
T A + +T+ + + + Q RP+ + GH V ++K+ P G
Sbjct: 318 SNNTFA------SCSTDMCIHVC----KLGQDRPI----KTFQGHTNEVNAIKWDPTGNL 363
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK---------QLVSGCKNGV 272
LAS S D T++ W + + + H + I WSP L S +
Sbjct: 364 LASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDST 423
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
+ WD G I + H++ + ++++ P R AS D + IW+ V
Sbjct: 424 VRLWDVDRGICI-HTLTKHQEPVYSVAFSP-----DGRYLASGSFDKCVHIWNTQTGALV 477
Query: 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364
T + + W +G + +++ D ++ V
Sbjct: 478 HSYRG-TGGIFEVCWNAAGDKVGASASDGSVCV 509
Score = 130 (50.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE---------------QDLPG 542
LRGH V++ AW+ S LL SGS DST ++WN+ QD+P
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 543 HGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ D V ++DW +G +A+G D R+W
Sbjct: 225 NKD-VTSLDWNSEGTLLATGSYDGFARIW 252
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 271 (100.5 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 89/300 (29%), Positives = 132/300 (44%)
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
GQ + +K +T+L W N + A+ DG RIW L H +
Sbjct: 219 GQDVPSNKD-VTSLDW-----NSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFA 271
Query: 345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA------HWV--NTLA-LSTDYLM 394
++W G I SA D+T +W A G + H+ W NT A STD M
Sbjct: 272 LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTD--M 329
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
+ G + +++ K+ P G L S SDD TL +W+ K+ +
Sbjct: 330 CIHVCKLGQDRPIKTFQGHTNEVNAIKWD---PTGNLLASCSDDMTLKIWSM-KQDNCVH 385
Query: 455 RMTGHQQLINCVEFSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ H + I +++SP G ++ASASFD +++LWD G I TL H + V
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPV 445
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
Y VA+S D R L SGS D + +WN +T + G G ++ V W G+KV + D
Sbjct: 446 YSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG-IFEVCWNAAGDKVGASASD 504
Score = 218 (81.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 61/264 (23%), Positives = 116/264 (43%)
Query: 326 VILSQCVRVL---TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
++L C+R + VT + W G L+ + S D ++W DG + TL H
Sbjct: 209 LVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKG 267
Query: 382 WVNTLALST--DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSGS 436
+ L + ++++ T +D E + H+ S S
Sbjct: 268 PIFALKWNKKGNFILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCS 326
Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496
D + + +++ + GH +N +++ P G ++AS S D ++K+W + +
Sbjct: 327 TDMCIHVCKLGQDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVH 385
Query: 497 TLRGHVQAVYMVAWS---------SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
L+ H + +Y + WS + + +L S S DST+++W++ L H + V
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPV 445
Query: 548 YAVDWAPDGEKVASGGKDKVLRLW 571
Y+V ++PDG +ASG DK + +W
Sbjct: 446 YSVAFSPDGRYLASGSFDKCVHIW 469
Score = 207 (77.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 72/300 (24%), Positives = 121/300 (40%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFY---VNET-EIT 163
GH V ++P LASGSGD+T R W+++ + G+ L + E +
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENST----SGSTQLVLRHCIREGGQDV 222
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFSPNGRSL 222
+ DV LD N+E + ++ S++ H + ++K++ G +
Sbjct: 223 PSNKDVTSLDW-NSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV-IHAWDSSTG 281
S D T WD T + H L + W S + C + IH
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--SNNTFASCSTDMCIHVCKLGQD 339
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341
+ I + +GH + A+ W+P AS D ++IW + CV L +H +
Sbjct: 340 RPI-KTFQGHTNEVNAIKWDPTG-----NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKE 393
Query: 342 VTCIRWGGSG----------LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+ I+W +G ++ SAS D T+++W G+ TL H V ++A S D
Sbjct: 394 IYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD 453
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 51/244 (20%), Positives = 96/244 (39%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV-----------ILSQCVRVL- 335
+RGH+ + +W P AS D RIW++ +L C+R
Sbjct: 165 LRGHESEVFICAWNPVS-----DLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGG 219
Query: 336 --TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST-- 390
+ VT + W G L+ + S D ++W DG + TL H + L +
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKG 278
Query: 391 DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
++++ T +D E + H+ S S D + +
Sbjct: 279 NFILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLG 337
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+++ + GH +N +++ P G ++AS S D ++K+W + + L+ H + +Y
Sbjct: 338 QDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT 396
Query: 508 VAWS 511
+ WS
Sbjct: 397 IKWS 400
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/229 (24%), Positives = 93/229 (40%)
Query: 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
P H+ + V + N + AS S D + + P+ +G + NE K
Sbjct: 305 PFHSAPALDVDWQSNN-TFASCSTDMCIHVCKLGQDRPIKTFQG-----HTNEVNAIKWD 358
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----- 221
L + + + + I KQ C + H + + ++K+SP G
Sbjct: 359 PTGNLLASCSDDMTLKIWSMKQ--------DNCVHDLQAHNKEIYTIKWSPTGPGTNNPN 410
Query: 222 ----LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
LAS S D+TVR WDV + H+ V +A+SPD + L SG + +H W+
Sbjct: 411 ANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ TG + RG I + W N + +S DG++ + D+
Sbjct: 471 TQTGALV-HSYRG-TGGIFEVCW-----NAAGDKVGASASDGSVCVLDL 512
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 34/139 (24%), Positives = 63/139 (45%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKS-----LAR---MTGHQQL-----INCVEFSPDGR 473
P + L SGS D T +WN + S + R G Q + + ++++ +G
Sbjct: 179 PVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGT 238
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++A+ S+D ++W + G +TL H ++ + W+ ++S D T +W+ T
Sbjct: 239 LLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT 297
Query: 534 KKIEQDLPGHGDEVYAVDW 552
+ +Q P H VDW
Sbjct: 298 GEAKQQFPFHSAPALDVDW 316
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 57/273 (20%), Positives = 105/273 (38%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGTPYLFYVNETE 161
S++ H + ++K++ G + S D T WD T F P L + +
Sbjct: 260 STLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDV--DWQ 317
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
T A + +T+ + + + Q RP+ + GH V ++K+ P G
Sbjct: 318 SNNTFA------SCSTDMCIHVC----KLGQDRPI----KTFQGHTNEVNAIKWDPTGNL 363
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK---------QLVSGCKNGV 272
LAS S D T++ W + + + H + I WSP L S +
Sbjct: 364 LASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDST 423
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
+ WD G I + H++ + ++++ P R AS D + IW+ V
Sbjct: 424 VRLWDVDRGICI-HTLTKHQEPVYSVAFSP-----DGRYLASGSFDKCVHIWNTQTGALV 477
Query: 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364
T + + W +G + +++ D ++ V
Sbjct: 478 HSYRG-TGGIFEVCWNAAGDKVGASASDGSVCV 509
Score = 130 (50.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE---------------QDLPG 542
LRGH V++ AW+ S LL SGS DST ++WN+ QD+P
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 543 HGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ D V ++DW +G +A+G D R+W
Sbjct: 225 NKD-VTSLDWNSEGTLLATGSYDGFARIW 252
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 271 (100.5 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 89/300 (29%), Positives = 132/300 (44%)
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
GQ + +K +T+L W N + A+ DG RIW L H +
Sbjct: 219 GQDVPSNKD-VTSLDW-----NSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFA 271
Query: 345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA------HWV--NTLA-LSTDYLM 394
++W G I SA D+T +W A G + H+ W NT A STD M
Sbjct: 272 LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTD--M 329
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
+ G + +++ K+ P G L S SDD TL +W+ K+ +
Sbjct: 330 CIHVCKLGQDRPIKTFQGHTNEVNAIKWD---PTGNLLASCSDDMTLKIWSM-KQDNCVH 385
Query: 455 RMTGHQQLINCVEFSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ H + I +++SP G ++ASASFD +++LWD G I TL H + V
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPV 445
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
Y VA+S D R L SGS D + +WN +T + G G ++ V W G+KV + D
Sbjct: 446 YSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG-IFEVCWNAAGDKVGASASD 504
Score = 218 (81.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 61/264 (23%), Positives = 116/264 (43%)
Query: 326 VILSQCVRVL---TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
++L C+R + VT + W G L+ + S D ++W DG + TL H
Sbjct: 209 LVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKG 267
Query: 382 WVNTLALST--DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSGS 436
+ L + ++++ T +D E + H+ S S
Sbjct: 268 PIFALKWNKKGNFILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCS 326
Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496
D + + +++ + GH +N +++ P G ++AS S D ++K+W + +
Sbjct: 327 TDMCIHVCKLGQDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVH 385
Query: 497 TLRGHVQAVYMVAWS---------SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
L+ H + +Y + WS + + +L S S DST+++W++ L H + V
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPV 445
Query: 548 YAVDWAPDGEKVASGGKDKVLRLW 571
Y+V ++PDG +ASG DK + +W
Sbjct: 446 YSVAFSPDGRYLASGSFDKCVHIW 469
Score = 205 (77.2 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 70/297 (23%), Positives = 119/297 (40%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET-EITKTL 166
GH V ++P LASGSGD+T R W+++ + + + E + +
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQ-LVLRHCIREGGQDVPSN 225
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFSPNGRSLASG 225
DV LD N+E + ++ S++ H + ++K++ G + S
Sbjct: 226 KDVTSLDW-NSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSA 284
Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV-IHAWDSSTGKQI 284
D T WD T + H L + W S + C + IH + I
Sbjct: 285 GVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--SNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
+ +GH + A+ W+P AS D ++IW + CV L +H + +
Sbjct: 343 -KTFQGHTNEVNAIKWDPTG-----NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT 396
Query: 345 IRWGGSG----------LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
I+W +G ++ SAS D T+++W G+ TL H V ++A S D
Sbjct: 397 IKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD 453
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 51/244 (20%), Positives = 96/244 (39%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV-----------ILSQCVRVL- 335
+RGH+ + +W P AS D RIW++ +L C+R
Sbjct: 165 LRGHESEVFICAWNPVS-----DLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGG 219
Query: 336 --TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST-- 390
+ VT + W G L+ + S D ++W DG + TL H + L +
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKG 278
Query: 391 DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
++++ T +D E + H+ S S D + +
Sbjct: 279 NFILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLG 337
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+++ + GH +N +++ P G ++AS S D ++K+W + + L+ H + +Y
Sbjct: 338 QDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT 396
Query: 508 VAWS 511
+ WS
Sbjct: 397 IKWS 400
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/229 (24%), Positives = 93/229 (40%)
Query: 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
P H+ + V + N + AS S D + + P+ +G + NE K
Sbjct: 305 PFHSAPALDVDWQSNN-TFASCSTDMCIHVCKLGQDRPIKTFQG-----HTNEVNAIKWD 358
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----- 221
L + + + + I KQ C + H + + ++K+SP G
Sbjct: 359 PTGNLLASCSDDMTLKIWSMKQ--------DNCVHDLQAHNKEIYTIKWSPTGPGTNNPN 410
Query: 222 ----LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
LAS S D+TVR WDV + H+ V +A+SPD + L SG + +H W+
Sbjct: 411 ANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ TG + RG I + W N + +S DG++ + D+
Sbjct: 471 TQTGALV-HSYRG-TGGIFEVCW-----NAAGDKVGASASDGSVCVLDL 512
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 34/139 (24%), Positives = 63/139 (45%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKS-----LAR---MTGHQQL-----INCVEFSPDGR 473
P + L SGS D T +WN + S + R G Q + + ++++ +G
Sbjct: 179 PVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGT 238
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++A+ S+D ++W + G +TL H ++ + W+ ++S D T +W+ T
Sbjct: 239 LLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT 297
Query: 534 KKIEQDLPGHGDEVYAVDW 552
+ +Q P H VDW
Sbjct: 298 GEAKQQFPFHSAPALDVDW 316
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 57/273 (20%), Positives = 105/273 (38%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGTPYLFYVNETE 161
S++ H + ++K++ G + S D T WD T F P L + +
Sbjct: 260 STLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDV--DWQ 317
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
T A + +T+ + + + Q RP+ + GH V ++K+ P G
Sbjct: 318 SNNTFA------SCSTDMCIHVC----KLGQDRPI----KTFQGHTNEVNAIKWDPTGNL 363
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK---------QLVSGCKNGV 272
LAS S D T++ W + + + H + I WSP L S +
Sbjct: 364 LASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDST 423
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
+ WD G I + H++ + ++++ P R AS D + IW+ V
Sbjct: 424 VRLWDVDRGICI-HTLTKHQEPVYSVAFSP-----DGRYLASGSFDKCVHIWNTQTGALV 477
Query: 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364
T + + W +G + +++ D ++ V
Sbjct: 478 HSYRG-TGGIFEVCWNAAGDKVGASASDGSVCV 509
Score = 130 (50.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE---------------QDLPG 542
LRGH V++ AW+ S LL SGS DST ++WN+ QD+P
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPS 224
Query: 543 HGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ D V ++DW +G +A+G D R+W
Sbjct: 225 NKD-VTSLDWNSEGTLLATGSYDGFARIW 252
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 271 (100.5 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 89/300 (29%), Positives = 132/300 (44%)
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
GQ + +K +T+L W N + A+ DG RIW L H +
Sbjct: 219 GQDVPSNKD-VTSLDW-----NSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFA 271
Query: 345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA------HWV--NTLA-LSTDYLM 394
++W G I SA D+T +W A G + H+ W NT A STD M
Sbjct: 272 LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTD--M 329
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
+ G + +++ K+ P G L S SDD TL +W+ K+ +
Sbjct: 330 CIHVCKLGQDRPIKTFQGHTNEVNAIKWD---PTGNLLASCSDDMTLKIWSM-KQDNCVH 385
Query: 455 RMTGHQQLINCVEFSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ H + I +++SP G ++ASASFD +++LWD G I TL H + V
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPV 445
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
Y VA+S D R L SGS D + +WN +T + G G ++ V W G+KV + D
Sbjct: 446 YSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG-IFEVCWNAAGDKVGASASD 504
Score = 218 (81.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 61/264 (23%), Positives = 116/264 (43%)
Query: 326 VILSQCVRVL---TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
++L C+R + VT + W G L+ + S D ++W DG + TL H
Sbjct: 209 LVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKG 267
Query: 382 WVNTLALST--DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSGS 436
+ L + ++++ T +D E + H+ S S
Sbjct: 268 PIFALKWNKKGNFILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCS 326
Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496
D + + +++ + GH +N +++ P G ++AS S D ++K+W + +
Sbjct: 327 TDMCIHVCKLGQDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVH 385
Query: 497 TLRGHVQAVYMVAWS---------SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
L+ H + +Y + WS + + +L S S DST+++W++ L H + V
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPV 445
Query: 548 YAVDWAPDGEKVASGGKDKVLRLW 571
Y+V ++PDG +ASG DK + +W
Sbjct: 446 YSVAFSPDGRYLASGSFDKCVHIW 469
Score = 205 (77.2 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 70/297 (23%), Positives = 119/297 (40%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET-EITKTL 166
GH V ++P LASGSGD+T R W+++ + + + E + +
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQ-LVLRHCIREGGQDVPSN 225
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFSPNGRSLASG 225
DV LD N+E + ++ S++ H + ++K++ G + S
Sbjct: 226 KDVTSLDW-NSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSA 284
Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV-IHAWDSSTGKQI 284
D T WD T + H L + W S + C + IH + I
Sbjct: 285 GVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--SNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
+ +GH + A+ W+P AS D ++IW + CV L +H + +
Sbjct: 343 -KTFQGHTNEVNAIKWDPTG-----NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT 396
Query: 345 IRWGGSG----------LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
I+W +G ++ SAS D T+++W G+ TL H V ++A S D
Sbjct: 397 IKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD 453
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 51/244 (20%), Positives = 96/244 (39%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV-----------ILSQCVRVL- 335
+RGH+ + +W P AS D RIW++ +L C+R
Sbjct: 165 LRGHESEVFICAWNPVS-----DLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGG 219
Query: 336 --TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST-- 390
+ VT + W G L+ + S D ++W DG + TL H + L +
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKG 278
Query: 391 DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
++++ T +D E + H+ S S D + +
Sbjct: 279 NFILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLG 337
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+++ + GH +N +++ P G ++AS S D ++K+W + + L+ H + +Y
Sbjct: 338 QDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT 396
Query: 508 VAWS 511
+ WS
Sbjct: 397 IKWS 400
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/229 (24%), Positives = 93/229 (40%)
Query: 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
P H+ + V + N + AS S D + + P+ +G + NE K
Sbjct: 305 PFHSAPALDVDWQSNN-TFASCSTDMCIHVCKLGQDRPIKTFQG-----HTNEVNAIKWD 358
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----- 221
L + + + + I KQ C + H + + ++K+SP G
Sbjct: 359 PTGNLLASCSDDMTLKIWSMKQ--------DNCVHDLQAHNKEIYTIKWSPTGPGTNNPN 410
Query: 222 ----LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
LAS S D+TVR WDV + H+ V +A+SPD + L SG + +H W+
Sbjct: 411 ANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ TG + RG I + W N + +S DG++ + D+
Sbjct: 471 TQTGALV-HSYRG-TGGIFEVCW-----NAAGDKVGASASDGSVCVLDL 512
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 34/139 (24%), Positives = 63/139 (45%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKS-----LAR---MTGHQQL-----INCVEFSPDGR 473
P + L SGS D T +WN + S + R G Q + + ++++ +G
Sbjct: 179 PVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGT 238
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++A+ S+D ++W + G +TL H ++ + W+ ++S D T +W+ T
Sbjct: 239 LLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT 297
Query: 534 KKIEQDLPGHGDEVYAVDW 552
+ +Q P H VDW
Sbjct: 298 GEAKQQFPFHSAPALDVDW 316
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 57/273 (20%), Positives = 105/273 (38%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGTPYLFYVNETE 161
S++ H + ++K++ G + S D T WD T F P L + +
Sbjct: 260 STLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDV--DWQ 317
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
T A + +T+ + + + Q RP+ + GH V ++K+ P G
Sbjct: 318 SNNTFA------SCSTDMCIHVC----KLGQDRPI----KTFQGHTNEVNAIKWDPTGNL 363
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK---------QLVSGCKNGV 272
LAS S D T++ W + + + H + I WSP L S +
Sbjct: 364 LASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDST 423
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
+ WD G I + H++ + ++++ P R AS D + IW+ V
Sbjct: 424 VRLWDVDRGICI-HTLTKHQEPVYSVAFSP-----DGRYLASGSFDKCVHIWNTQTGALV 477
Query: 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364
T + + W +G + +++ D ++ V
Sbjct: 478 HSYRG-TGGIFEVCWNAAGDKVGASASDGSVCV 509
Score = 130 (50.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE---------------QDLPG 542
LRGH V++ AW+ S LL SGS DST ++WN+ QD+P
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPS 224
Query: 543 HGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ D V ++DW +G +A+G D R+W
Sbjct: 225 NKD-VTSLDWNSEGTLLATGSYDGFARIW 252
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 271 (100.5 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 89/300 (29%), Positives = 132/300 (44%)
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
GQ + +K +T+L W N + A+ DG RIW L H +
Sbjct: 219 GQDVPSNKD-VTSLDW-----NSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFA 271
Query: 345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA------HWV--NTLA-LSTDYLM 394
++W G I SA D+T +W A G + H+ W NT A STD M
Sbjct: 272 LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTFASCSTD--M 329
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
+ G + +++ K+ P G L S SDD TL +W+ K+ +
Sbjct: 330 CIHVCKLGQDRPIKTFQGHTNEVNAIKWD---PTGNLLASCSDDMTLKIWSM-KQDNCVH 385
Query: 455 RMTGHQQLINCVEFSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
+ H + I +++SP G ++ASASFD +++LWD G I TL H + V
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPV 445
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
Y VA+S D R L SGS D + +WN +T + G G ++ V W G+KV + D
Sbjct: 446 YSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG-IFEVCWNAAGDKVGASASD 504
Score = 216 (81.1 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 62/265 (23%), Positives = 119/265 (44%)
Query: 326 VILSQCVRVL---TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
++L C+R + VT + W G L+ + S D ++W DG + TL H
Sbjct: 209 LVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKG 267
Query: 382 WVNTLALST--DYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSG 435
+ L + ++++ T +D A+ E+ + H+ S
Sbjct: 268 PIFALKWNKKGNFILSAGVDKTT-IIWD-AHTGEAKQLFPFHSAPALDVDWQSNNTFASC 325
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI 495
S D + + +++ + GH +N +++ P G ++AS S D ++K+W + +
Sbjct: 326 STDMCIHVCKLGQDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCV 384
Query: 496 TTLRGHVQAVYMVAWS---------SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
L+ H + +Y + WS + + +L S S DST+++W++ L H +
Sbjct: 385 HDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEP 444
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
VY+V ++PDG +ASG DK + +W
Sbjct: 445 VYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 204 (76.9 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 72/300 (24%), Positives = 120/300 (40%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFY---VNET-EIT 163
GH V ++P LASGSGD+T R W+++ + G+ L + E +
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENST----SGSTQLVLRHCIREGGQDV 222
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFSPNGRSL 222
+ DV LD N+E + ++ S++ H + ++K++ G +
Sbjct: 223 PSNKDVTSLDW-NSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV-IHAWDSSTG 281
S D T WD T H L + W S + C + IH
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQ--SNNTFASCSTDMCIHVCKLGQD 339
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341
+ I + +GH + A+ W+P AS D ++IW + CV L +H +
Sbjct: 340 RPI-KTFQGHTNEVNAIKWDPTG-----NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKE 393
Query: 342 VTCIRWGGSG----------LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+ I+W +G ++ SAS D T+++W G+ TL H V ++A S D
Sbjct: 394 IYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD 453
Score = 151 (58.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 52/245 (21%), Positives = 99/245 (40%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV-----------ILSQCVRVL- 335
+RGH+ + +W P AS D RIW++ +L C+R
Sbjct: 165 LRGHESEVFICAWNPVS-----DLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGG 219
Query: 336 --TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST-- 390
+ VT + W G L+ + S D ++W DG + TL H + L +
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKG 278
Query: 391 DYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWNP 446
++++ T +D A+ E+ + H+ S S D + +
Sbjct: 279 NFILSAGVDKTT-IIWD-AHTGEAKQLFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKL 336
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
+++ + GH +N +++ P G ++AS S D ++K+W + + L+ H + +Y
Sbjct: 337 GQDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIY 395
Query: 507 MVAWS 511
+ WS
Sbjct: 396 TIKWS 400
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/229 (24%), Positives = 93/229 (40%)
Query: 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
P H+ + V + N + AS S D + + P+ +G + NE K
Sbjct: 305 PFHSAPALDVDWQSNN-TFASCSTDMCIHVCKLGQDRPIKTFQG-----HTNEVNAIKWD 358
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----- 221
L + + + + I KQ C + H + + ++K+SP G
Sbjct: 359 PTGNLLASCSDDMTLKIWSMKQ--------DNCVHDLQAHNKEIYTIKWSPTGPGTSNPN 410
Query: 222 ----LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
LAS S D+TVR WDV + H+ V +A+SPD + L SG + +H W+
Sbjct: 411 ANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ TG + RG I + W N + +S DG++ + D+
Sbjct: 471 TQTGALV-HSYRG-TGGIFEVCW-----NAAGDKVGASASDGSVCVLDL 512
Score = 139 (54.0 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 58/273 (21%), Positives = 106/273 (38%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGTPYLFYVNETE 161
S++ H + ++K++ G + S D T WD T LF P L + +
Sbjct: 260 STLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDV--DWQ 317
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
T A + +T+ + + + Q RP+ + GH V ++K+ P G
Sbjct: 318 SNNTFA------SCSTDMCIHVC----KLGQDRPI----KTFQGHTNEVNAIKWDPTGNL 363
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK---------QLVSGCKNGV 272
LAS S D T++ W + + + H + I WSP L S +
Sbjct: 364 LASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDST 423
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
+ WD G I + H++ + ++++ P R AS D + IW+ V
Sbjct: 424 VRLWDVDRGICI-HTLTKHQEPVYSVAFSP-----DGRYLASGSFDKCVHIWNTQTGALV 477
Query: 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364
T + + W +G + +++ D ++ V
Sbjct: 478 HSYRG-TGGIFEVCWNAAGDKVGASASDGSVCV 509
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/139 (24%), Positives = 63/139 (45%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKS-----LAR---MTGHQQL-----INCVEFSPDGR 473
P + L SGS D T +WN + S + R G Q + + ++++ +G
Sbjct: 179 PVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGT 238
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++A+ S+D ++W + G +TL H ++ + W+ ++S D T +W+ T
Sbjct: 239 LLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT 297
Query: 534 KKIEQDLPGHGDEVYAVDW 552
+ +Q P H VDW
Sbjct: 298 GEAKQLFPFHSAPALDVDW 316
Score = 130 (50.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE---------------QDLPG 542
LRGH V++ AW+ S LL SGS DST ++WN+ QD+P
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 543 HGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ D V ++DW +G +A+G D R+W
Sbjct: 225 NKD-VTSLDWNSEGTLLATGSYDGFARIW 252
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 272 (100.8 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 66/232 (28%), Positives = 120/232 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + ++ S +D I+IWD +C R+LT HT SV C+++ +I + S D T++V
Sbjct: 273 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD-ERVIITGSSDSTVRV 331
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G M TL H V L + ++ + +D A+P + + + L ++
Sbjct: 332 WDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV-WDMASPTDITLRRVLVGHR 390
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +WN + + + GH++ I C+++ R++ S S
Sbjct: 391 AAVNVVDFDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 447
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW++
Sbjct: 448 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 497
Score = 233 (87.1 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 67/248 (27%), Positives = 124/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q + + ++ V C+++ ++ S +D TIK+W S R L GH V L L
Sbjct: 258 QRIHCRSETSKGVYCLQYDDQKIV-SGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQ 314
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + + +S + N E H A + G +V+ S D ++ +W+
Sbjct: 315 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAVWD 373
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W+ +F+ TL GH +
Sbjct: 374 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR 431
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 432 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 487
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 488 YDGKIKVW 495
Score = 211 (79.3 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV T L H VL + ++
Sbjct: 299 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 356
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S T + + + GH+ + + ++ ++ ++SG
Sbjct: 357 --NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 408
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W+ + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 409 -DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 466
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 467 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 524
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + +VS S D T+ +W+
Sbjct: 525 LQFDEFQ-IVSSSHDDTILIWD 545
Score = 194 (73.4 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 72/284 (25%), Positives = 124/284 (43%)
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + SG D T++ WD +T GH VLC+ + D + +++G + + WD +
Sbjct: 278 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN 335
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLT 336
TG+ + + H + + HL + KD +I +WD+ + RVL
Sbjct: 336 TGEMLNTLIH-HCEAV-------LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLV 387
Query: 337 SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
H +V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 388 GHRAAVNVVDFDDKYIV-SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLV-V 444
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------P 446
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 445 SGSSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDP 503
Query: 447 EKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F D I S+S D +I +WD
Sbjct: 504 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 545
Score = 149 (57.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 49/184 (26%), Positives = 81/184 (44%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QTPLFKCEGTPYLFYV 157
C + GH +V+ +++ R + +GS D+TVR WDV T T + CE +L +
Sbjct: 299 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 356
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
N +T + D + + DI ++ V GH AV V F
Sbjct: 357 NGMMVTCS-KD-RSIAVWDMASPTDITLRRVLV--------------GHRAAVNVVDF-- 398
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+ + + S SGD T++ W+ +T + GHK + C+ + + +VSG + I WD
Sbjct: 399 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWD 456
Query: 278 SSTG 281
G
Sbjct: 457 IECG 460
Score = 142 (55.0 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 425 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 480
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 481 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDT 540
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 541 ILIWDFL 547
Score = 51 (23.0 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 123 RSLASGSGDTTVRFWDVTT---QTPLFKCEGTPY-LFYVNETEITKTLADVLPLDTLNTE 178
+ + SG D T++ WD +T + L G+ L Y IT + + + +NT
Sbjct: 278 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTG 337
Query: 179 EVVD-IVYQKQAVFQVR 194
E+++ +++ +AV +R
Sbjct: 338 EMLNTLIHHCEAVLHLR 354
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 186 (70.5 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 45/139 (32%), Positives = 72/139 (51%)
Query: 435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD--GRIG 492
G D ++ +W+ EK + H+ + + ++ G ++AS S D I LWD G G
Sbjct: 82 GYADGSIRIWDTEKGTCEV-NFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESG 140
Query: 493 KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDW 552
F LRGH V + + + LVS S D L+VW+++T+ Q + GH EV++VD
Sbjct: 141 LF--RLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDT 198
Query: 553 APDGEKVASGGKDKVLRLW 571
P+ V +G D+ LR +
Sbjct: 199 DPEERYVVTGSADQELRFY 217
Score = 183 (69.5 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 66/250 (26%), Positives = 106/250 (42%)
Query: 337 SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
S RSVT + L+ S S +K+W S G RT++ + + Y +
Sbjct: 407 SDVRSVTLSE--DNTLLMSTSHSE-VKIWNPSTGSCLRTIDSGYGLCSLIVPQNKY--GI 461
Query: 397 EATSTGGFKY----DPANPEESSKHALAKYQ-AQCPEGEKLVSGSDDFTLFLWNPE-KEK 450
T +G + EE H + P V+ S D + W + K+K
Sbjct: 462 VGTKSGVLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQK 521
Query: 451 --KSLARMTGHQ---QLIN----CVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH 501
K+ ++T +N V SPD + IA A D ++K++ KF +L GH
Sbjct: 522 SGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGH 581
Query: 502 VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS 561
V + SSD L+V+GS D LK+W + + + HGD V V + + + S
Sbjct: 582 KLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFS 641
Query: 562 GGKDKVLRLW 571
GKD++++ W
Sbjct: 642 IGKDRLVKYW 651
Score = 146 (56.5 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 47/164 (28%), Positives = 78/164 (47%)
Query: 179 EVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 238
E V I + +Q V + +T +SS G + AV S+ S + +A G D ++R WD
Sbjct: 39 EKVGIWHVRQGVCS-KTLTP-SSSRGGPSLAVTSIASSASSL-VAVGYADGSIRIWDTEK 95
Query: 239 QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITAL 298
T HK V + ++ L SG K+ I WD G+ +RGH+ +T L
Sbjct: 96 GTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDV-VGESGLFRLRGHRDQVTDL 154
Query: 299 SWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV 342
+ L+ ++ SS KD +R+WD+ C+++++ H V
Sbjct: 155 VF----LDGG-KKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEV 193
Score = 146 (56.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 52/200 (26%), Positives = 87/200 (43%)
Query: 345 IRWGGSGLIYSASQDRTIKVWRASDGVMCRTLE------GHAHWVNTLALSTDYLMRVEA 398
I + +G A + +W GV +TL G + V ++A S L+ V
Sbjct: 24 IAYDSTGKYVLAPALEKVGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVAV-G 82
Query: 399 TSTGGFK-YDPANPE-----ESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
+ G + +D S K A+ + G L SGS D + LW+ E
Sbjct: 83 YADGSIRIWDTEKGTCEVNFNSHKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGES-G 140
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
L R+ GH+ + + F G+ + S+S DK +++WD + + GH V+ V
Sbjct: 141 LFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDP 200
Query: 513 DSRLLVSGSADSTLKVWNMK 532
+ R +V+GSAD L+ + +K
Sbjct: 201 EERYVVTGSADQELRFYAVK 220
Score = 145 (56.1 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + H AV +++++ G LASGS D + WDV ++ LF+ GH+ V + +
Sbjct: 98 CEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFL 157
Query: 259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
K+LVS K+ + WD T + Q + GH + ++ +P
Sbjct: 158 DGGKKLVSSSKDKFLRVWDLET-QHCMQIVSGHHSEVWSVDTDP 200
Score = 142 (55.0 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 35/145 (24%), Positives = 71/145 (48%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+ + + D T+ ++ + K L+ + GH+ + C++ S DG +I + S DK++K+
Sbjct: 550 PDAKHIAVALLDSTVKVFYMDSLKFYLS-LYGHKLPVMCIDISSDGELIVTGSQDKNLKI 608
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
W G ++ H +V V + ++ L S D +K W+ + L GH E
Sbjct: 609 WGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAE 668
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
++ + + G+ + +G D+ +R W
Sbjct: 669 IWCLAISNRGDFLVTGSHDRSMRRW 693
Score = 133 (51.9 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/98 (30%), Positives = 50/98 (51%)
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++A D SI++WD G H AV + ++ +L SGS D+ + +W++
Sbjct: 78 LVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVG 137
Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ L GH D+V + + G+K+ S KDK LR+W
Sbjct: 138 ESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVW 175
Score = 132 (51.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 88/422 (20%), Positives = 173/422 (40%)
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
N T + A + D +++ V+D+ Q + R ++ + E++ ++ S
Sbjct: 320 NSTANGEASAKIELADAVSSPTVLDVFKLLQVIRAGRKISSFSFCPTAPKESLGTLALSL 379
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
N SL S ++ VT + +GH+ V + S D+ L+S + + W+
Sbjct: 380 NNNSLEFYSLKSSENAKTVTIEH-----QGHRSDVRSVTLSEDNTLLMS-TSHSEVKIWN 433
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS 337
STG + G+ + +L + Q + K G + I D+ + V + +
Sbjct: 434 PSTGSCLRTIDSGYG--LCSL------IVPQNKYGIVGTKSGVLEIIDIGSATKVEEVKA 485
Query: 338 HTRSVTCIRW--GGSGLIYSASQDRTIKVW----RASDGVMCRTLEGHAHWVNTLALSTD 391
H ++ I SG + + S D +K W + G + L V ++ ++ D
Sbjct: 486 HGGTIWSITPIPNDSGFV-TVSADHEVKFWEYQVKQKSGKATKKLT--VSNVKSMKMNDD 542
Query: 392 YL---MRVEATSTGGFKYDPANPE---ESSKHALAKYQAQCP--------EGEKLVSGSD 437
L + +A D +S K L+ Y + P +GE +V+GS
Sbjct: 543 VLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQ 602
Query: 438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497
D L +W + + + H + V+F + + S D+ +K WD + + T
Sbjct: 603 DKNLKIWGLDFGDCHKS-IFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLT 661
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK--IEQDLPGHGDEVYA--VDWA 553
L GH ++ +A S+ LV+GS D +++ W+ + +E++ +E++ +D A
Sbjct: 662 LEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSEEPFFLEEEKEKRLEELFESEIDNA 721
Query: 554 PD 555
D
Sbjct: 722 AD 723
Score = 115 (45.5 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 38/136 (27%), Positives = 63/136 (46%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C + H AV +++++ G LASGS D + WDV ++ LF+ G + +
Sbjct: 98 CEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRG-------HRDQ 150
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQK-QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
+T D++ LD +++V K V+ + C + GH V SV P R
Sbjct: 151 VT----DLVFLD--GGKKLVSSSKDKFLRVWDLE-TQHCMQIVSGHHSEVWSVDTDPEER 203
Query: 221 SLASGSGDTTVRFWDV 236
+ +GS D +RF+ V
Sbjct: 204 YVVTGSADQELRFYAV 219
Score = 110 (43.8 bits), Expect = 8.5e-17, Sum P(2) = 8.5e-17
Identities = 46/186 (24%), Positives = 82/186 (44%)
Query: 82 EVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
E V I + +Q V + +T +SS G + AV S+ S + +A G D ++R WD T
Sbjct: 39 EKVGIWHVRQGVCS-KTLTP-SSSRGGPSLAVTSIASSASSL-VAVGYADGSIRIWD--T 93
Query: 142 QTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTS 201
+ + + V K + +L + + + ++ V + +F++R
Sbjct: 94 EKGTCEVNFNSHKGAVTALRYNK-VGSMLASGSKDNDIILWDVVGESGLFRLR------- 145
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
GH + V + F G+ L S S D +R WD+ TQ + GH V + P+
Sbjct: 146 ---GHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEE 202
Query: 262 KQLVSG 267
+ +V+G
Sbjct: 203 RYVVTG 208
Score = 83 (34.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 21/130 (16%), Positives = 55/130 (42%)
Query: 443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV 502
L + E K GH+ + V S D ++ S S + +K+W+ G + T+
Sbjct: 389 LKSSENAKTVTIEHQGHRSDVRSVTLSEDNTLLMSTSHSE-VKIWNPSTGSCLRTIDSGY 447
Query: 503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASG 562
++ ++ + G+ L++ ++ + +++ HG ++++ P+ +
Sbjct: 448 GLCSLIV--PQNKYGIVGTKSGVLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTV 505
Query: 563 GKDKVLRLWQ 572
D ++ W+
Sbjct: 506 SADHEVKFWE 515
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 243 (90.6 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 82/291 (28%), Positives = 123/291 (42%)
Query: 295 ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LI 353
+T+L W N A DG RIW L H + ++W G I
Sbjct: 238 VTSLDW-----NSDGTLLAMGSYDGFARIWTEN-GNLASTLGQHKGPIFALKWNKKGNYI 291
Query: 354 YSASQDRTIKVWRASDGVMCRTLEGHA------HWVN--TLA-LSTDYLMRVEATSTG-G 403
SA D+T +W A G + H+ W N T A TD M + G
Sbjct: 292 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCGTD--MCIHVCRLGCD 349
Query: 404 FKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
+ +A+ K+ P G L S SDD TL +W+ K+ + + H + I
Sbjct: 350 LPVKTFQGHTNEVNAI-KWD---PSGMLLASCSDDMTLKIWSM-KQDACVHDLQAHSKEI 404
Query: 464 NCVEFSPDGR---------IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS 514
+++SP G ++ASASFD +++LWD G TL H + VY +A+S D
Sbjct: 405 YTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDG 464
Query: 515 RLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
+ L SGS D + +WN ++ + G G ++ V W G+KV + D
Sbjct: 465 KYLASGSFDKCVHIWNTQSGSLVHSYQGTGG-IFEVCWNARGDKVGASASD 514
Score = 210 (79.0 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 60/264 (22%), Positives = 114/264 (43%)
Query: 326 VILSQCVRVL---TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
++L C+R + VT + W G L+ S D ++W +G + TL H
Sbjct: 219 LVLRHCIREGWHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIW-TENGNLASTLGQHKG 277
Query: 382 WVNTLALST--DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSGS 436
+ L + +Y++ T +D E + H+ S
Sbjct: 278 PIFALKWNKKGNYILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCG 336
Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496
D + + + + GH +N +++ P G ++AS S D ++K+W + +
Sbjct: 337 TDMCIHVCRLGCDLP-VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVH 395
Query: 497 TLRGHVQAVYMVAWS---------SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
L+ H + +Y + WS + S +L S S DST+++W+++ L H + V
Sbjct: 396 DLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPV 455
Query: 548 YAVDWAPDGEKVASGGKDKVLRLW 571
Y++ ++PDG+ +ASG DK + +W
Sbjct: 456 YSIAFSPDGKYLASGSFDKCVHIW 479
Score = 158 (60.7 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 56/206 (27%), Positives = 82/206 (39%)
Query: 195 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV-------TTQTPLFKC-- 245
P + T + GH V ++P LASGSGD+T R W++ +TQ L C
Sbjct: 168 PPNKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 226
Query: 246 EG-H----KHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSW 300
EG H V + W+ D L G +G W + G + + HK I AL W
Sbjct: 227 EGWHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIW-TENGN-LASTLGQHKGPIFALKW 284
Query: 301 EPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR 360
N + S+G D IWD + + H+ + W + S D
Sbjct: 285 -----NKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCGTDM 339
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTL 386
I V R + +T +GH + VN +
Sbjct: 340 CIHVCRLGCDLPVKTFQGHTNEVNAI 365
Score = 155 (59.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 43/181 (23%), Positives = 74/181 (40%)
Query: 204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ 263
P H+ + V + N + AS D + + P+ +GH + V I W P S
Sbjct: 315 PFHSAPALDVDWQ-NNTTFASCGTDMCIHVCRLGCDLPVKTFQGHTNEVNAIKWDP-SGM 372
Query: 264 LVSGCKNGV-IHAWDSSTGKQIGQPMRGHKQWITALSWEPFH---LN-HQCRRFASSGKD 318
L++ C + + + W + ++ H + I + W P N + AS+ D
Sbjct: 373 LLASCSDDMTLKIWSMKQDACV-HDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFD 431
Query: 319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLE 377
+R+WDV C LT H V I + G + S S D+ + +W G + + +
Sbjct: 432 STVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQ 491
Query: 378 G 378
G
Sbjct: 492 G 492
Score = 142 (55.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 39/137 (28%), Positives = 65/137 (47%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRS---------LASGSGDTTVRFWDVTTQTPLFKCEGHK 249
C + H++ + ++K+SP G + LAS S D+TVR WDV H+
Sbjct: 393 CVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQ 452
Query: 250 HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQC 309
V IA+SPD K L SG + +H W++ +G + +G I + W N +
Sbjct: 453 EPVYSIAFSPDGKYLASGSFDKCVHIWNTQSGSLV-HSYQG-TGGIFEVCW-----NARG 505
Query: 310 RRFASSGKDGAIRIWDV 326
+ +S DG++ + D+
Sbjct: 506 DKVGASASDGSVCVLDL 522
Score = 139 (54.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 37/157 (23%), Positives = 66/157 (42%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKK--SLARMTGH-----------QQLINCVEFSPDGR 473
P + L SGS D T +WN + S + H + + ++++ DG
Sbjct: 189 PVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGWHDVPSNKDVTSLDWNSDGT 248
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++A S+D ++W G +TL H ++ + W+ ++S D T +W+ T
Sbjct: 249 LLAMGSYDGFARIWTEN-GNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT 307
Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL 570
+ +Q P H VDW + AS G D + +
Sbjct: 308 GEAKQQFPFHSAPALDVDWQ-NNTTFASCGTDMCIHV 343
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 42/174 (24%), Positives = 76/174 (43%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYV---NET-EIT 163
GH V ++K+ P+G LAS S D T++ W + + + Y + T T
Sbjct: 357 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPAT 416
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
+ L + + + V + +Q V CT ++ H E V S+ FSP+G+ LA
Sbjct: 417 SNPNSSIMLASASFDSTVRLWDVEQGV--------CTHTLTKHQEPVYSIAFSPDGKYLA 468
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
SGS D V W+ + + + +G + + W+ ++ + +G + D
Sbjct: 469 SGSFDKCVHIWNTQSGSLVHSYQG-TGGIFEVCWNARGDKVGASASDGSVCVLD 521
Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK------------IEQ---DL 540
T LRGH V++ AW+ S LL SGS DST ++WN+ I + D+
Sbjct: 173 TVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGWHDV 232
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
P + D V ++DW DG +A G D R+W
Sbjct: 233 PSNKD-VTSLDWNSDGTLLAMGSYDGFARIW 262
Score = 116 (45.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 42/178 (23%), Positives = 68/178 (38%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP----- 259
GH V ++K+ P+G LAS S D T++ W + + + H + I WSP
Sbjct: 357 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPAT 416
Query: 260 ----DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS 315
S L S + + WD G + H++ + ++++ P + AS
Sbjct: 417 SNPNSSIMLASASFDSTVRLWDVEQGV-CTHTLTKHQEPVYSIAFSP-----DGKYLASG 470
Query: 316 GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMC 373
D + IW+ V T + + W G AS ASDG +C
Sbjct: 471 SFDKCVHIWNTQSGSLVHSYQG-TGGIFEVCWNARGDKVGAS---------ASDGSVC 518
Score = 73 (30.8 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 98 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
P + T + GH V ++P LASGSGD+T R W++
Sbjct: 168 PPNKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNL 208
Score = 45 (20.9 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFW 137
+P + + V S+ ++ +G LA GS D R W
Sbjct: 232 VPSNKD-VTSLDWNSDGTLLAMGSYDGFARIW 262
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 216 (81.1 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 80/333 (24%), Positives = 149/333 (44%)
Query: 258 SPDSK-QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS-S 315
SP + ++V +N +I + + Q+ Q +R + I + L A S
Sbjct: 368 SPKEELKIVLLLQNNIIELYTLNLSAQVPQAVRASRITIGGHRSDVRTLAFSSDNIAVLS 427
Query: 316 GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRT 375
G +++IW+ QC+R + + G +I + ++++ + G + T
Sbjct: 428 GAAESVKIWNRSTLQCIRTMDCEYALCSLFVPGDRQVIVGTKTGK-LQLYDLASGTLMET 486
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFKY---DPANPEESSKHALAKYQAQ------- 425
L H V ++ALS D V + K+ + E S + L+ Q +
Sbjct: 487 LNAHDGAVWSIALSPDQRGFVTGGADKCVKFWDFELVKDESSIQKRLSMKQVRILQLDED 546
Query: 426 --CPE---GEKLVSGSD-DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
C +KL++ S D T+ ++ + K L+ + GH+ + C++ S DG +IA+ S
Sbjct: 547 VLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLS-LYGHKLPVLCMDISYDGALIATGS 605
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD 539
D+++K+W G +L H +V + + + S L + D+ +K W+ + Q
Sbjct: 606 ADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQWDADKFEHIQT 665
Query: 540 LPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
L GH EV+ + +P+G+ V S DK LRLW+
Sbjct: 666 LEGHHQEVWCLALSPNGDYVVSASHDKSLRLWE 698
Score = 180 (68.4 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 81/338 (23%), Positives = 146/338 (43%)
Query: 73 LPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTS-SMPGHAEAVISVKFSPNGRSLASGSGD 131
L + L ++++ Y QV R + ++ GH V ++ FS + ++ SG+ +
Sbjct: 373 LKIVLLLQNNIIEL-YTLNLSAQVPQAVRASRITIGGHRSDVRTLAFSSDNIAVLSGAAE 431
Query: 132 TTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADV-LPLDTLNTEEVVDIVYQKQAV 190
+ V+ W+ +T +C + + L + +P D + +V K +
Sbjct: 432 S-VKIWNRST----LQC--------IRTMDCEYALCSLFVPGDR---QVIVGTKTGKLQL 475
Query: 191 FQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD---VTTQTPLFKCEG 247
+ + T ++ H AV S+ SP+ R +G D V+FWD V ++ + K
Sbjct: 476 YDLASGT-LMETLNAHDGAVWSIALSPDQRGFVTGGADKCVKFWDFELVKDESSIQKRLS 534
Query: 248 HKHW--------VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALS 299
K VLC+ +SP+ K L + + + + T K + GHK + +
Sbjct: 535 MKQVRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFF-LSLYGHKLPVLCMD 593
Query: 300 WEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW-GGSGLIYSASQ 358
+++ A+ D ++IW + C R L +H SV +++ S L ++A +
Sbjct: 594 -----ISYDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGK 648
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALST--DYLM 394
D IK W A +TLEGH V LALS DY++
Sbjct: 649 DNKIKQWDADKFEHIQTLEGHHQEVWCLALSPNGDYVV 686
Score = 170 (64.9 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 60/212 (28%), Positives = 96/212 (45%)
Query: 364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEES---SKHAL 419
VW A G L+G H + L S D L G + + + E S + H
Sbjct: 49 VWDARKGEKVLILKGSKH-ESCLRPSPDGLHLAVGYEDGSIRIFSLLSGEASVAFNGHKA 107
Query: 420 AKYQAQCPE-GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
A Q + G +LVSGS D + +W+ E L R+ GH+ + V F + ++ ++
Sbjct: 108 AVTALQYDQLGGRLVSGSKDTDVIVWDVINES-GLYRLKGHKDAVTQVLFLKEKNLLVTS 166
Query: 479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ 538
D +K WD TL GH V+ +A S+ + L++G+ADS L+VW++ T E
Sbjct: 167 GKDTLVKWWDLDTQHCFKTLVGHRTEVWGMALVSEEKRLITGTADSELRVWDI-TYIQEL 225
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL 570
+ P + + +P EK +D+ L L
Sbjct: 226 EDPDEPESKKSKGSSPGAEK--DNEEDETLEL 255
Score = 166 (63.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 38/145 (26%), Positives = 74/145 (51%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+G L G +D ++ +++ + S+A GH+ + +++ G + S S D + +
Sbjct: 74 PDGLHLAVGYEDGSIRIFSLLSGEASVA-FNGHKAAVTALQYDQLGGRLVSGSKDTDVIV 132
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
WD + L+GH AV V + + LLV+ D+ +K W++ T+ + L GH E
Sbjct: 133 WDVINESGLYRLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQHCFKTLVGHRTE 192
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
V+ + + +++ +G D LR+W
Sbjct: 193 VWGMALVSEEKRLITGTADSELRVW 217
Score = 152 (58.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 44/160 (27%), Positives = 74/160 (46%)
Query: 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG 267
E V+ V++SPN + LA D TV+ + T GHK VLC+ S D + +G
Sbjct: 545 EDVLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCMDISYDGALIATG 604
Query: 268 CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSW-EPFHLNHQCRRFASSGKDGAIRIWDV 326
+ + W G + + H + L + HL F ++GKD I+ WD
Sbjct: 605 SADRNVKIWGLDFG-DCHRSLFAHDDSVMYLQFVAKSHL------FFTAGKDNKIKQWDA 657
Query: 327 ILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
+ ++ L H + V C+ +G + SAS D+++++W
Sbjct: 658 DKFEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLW 697
Score = 149 (57.5 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 35/126 (27%), Positives = 64/126 (50%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH AV ++++ G L SGS DT V WDV ++ L++ +GHK V + + + L
Sbjct: 104 GHKAAVTALQYDQLGGRLVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKEKNLL 163
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
V+ K+ ++ WD T + + + GH+ + ++ L + +R + D +R+W
Sbjct: 164 VTSGKDTLVKWWDLDT-QHCFKTLVGHRTEVWGMA-----LVSEEKRLITGTADSELRVW 217
Query: 325 DVILSQ 330
D+ Q
Sbjct: 218 DITYIQ 223
Score = 148 (57.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 79/312 (25%), Positives = 124/312 (39%)
Query: 234 WDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQ 293
WD + +G KH C+ SPD L G ++G I + +G + GHK
Sbjct: 50 WDARKGEKVLILKGSKH-ESCLRPSPDGLHLAVGYEDGSIRIFSLLSG-EASVAFNGHKA 107
Query: 294 WITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW-GGSGL 352
+TAL ++ R S KD + +WDVI + L H +VT + + L
Sbjct: 108 AVTALQYDQLG-----GRLVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKEKNL 162
Query: 353 IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPA-- 409
+ ++ +D +K W +TL GH V +AL ++ + T+ + +D
Sbjct: 163 LVTSGKDTLVKWWDLDTQHCFKTLVGHRTEVWGMALVSEEKRLITGTADSELRVWDITYI 222
Query: 410 -NPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
E+ + K + P EK +D TL L +E+ L+ C
Sbjct: 223 QELEDPDEPESKKSKGSSPGAEK--DNEEDETLELDESPEER-----------LLKC--- 266
Query: 469 SPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKV 528
S G I+ D+ + L R+GK I G AV V +S S + D +K
Sbjct: 267 SKAGSIMREGR-DRVVTLATDRMGK-ILACHG-TDAVLEV-FSVLSEEEIKKKLDKKMKK 322
Query: 529 WNMKTKK-IEQD 539
K KK E+D
Sbjct: 323 AKKKAKKKSEED 334
Score = 142 (55.0 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 441 LFLWNPEK-EKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR 499
+F+W+ K EK + + + H+ +C+ SPDG +A D SI+++ G+
Sbjct: 47 VFVWDARKGEKVLILKGSKHE---SCLRPSPDGLHLAVGYEDGSIRIFSLLSGEASVAFN 103
Query: 500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV 559
GH AV + + LVSGS D+ + VW++ + L GH D V V + + +
Sbjct: 104 GHKAAVTALQYDQLGGRLVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKEKNLL 163
Query: 560 ASGGKDKVLRLW 571
+ GKD +++ W
Sbjct: 164 VTSGKDTLVKWW 175
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 39/155 (25%), Positives = 70/155 (45%)
Query: 216 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA 275
SP+G LA G D ++R + + + GHK V + + +LVSG K+ +
Sbjct: 73 SPDGLHLAVGYEDGSIRIFSLLSGEASVAFNGHKAAVTALQYDQLGGRLVSGSKDTDVIV 132
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
WD + + ++GHK +T + + L + +SGKD ++ WD+ C + L
Sbjct: 133 WDVINESGLYR-LKGHKDAVTQVLF----LKEK-NLLVTSGKDTLVKWWDLDTQHCFKTL 186
Query: 336 TSHTRSVTCIRWGGSGL-----IYSASQDRTIKVW 365
H V WG + + + + + D ++VW
Sbjct: 187 VGHRTEV----WGMALVSEEKRLITGTADSELRVW 217
Score = 111 (44.1 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 39/169 (23%), Positives = 75/169 (44%)
Query: 119 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTE 178
SP+G LA G D ++R + + + G + V + + L L + +T+
Sbjct: 73 SPDGLHLAVGYEDGSIRIFSLLSGEASVAFNG--HKAAVTALQYDQ-LGGRLVSGSKDTD 129
Query: 179 EVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 238
+V V + +++++ GH +AV V F L + DT V++WD+ T
Sbjct: 130 VIVWDVINESGLYRLK----------GHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDT 179
Query: 239 QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
Q GH+ V +A + K+L++G + + WD + +++ P
Sbjct: 180 QHCFKTLVGHRTEVWGMALVSEEKRLITGTADSELRVWDITYIQELEDP 228
Score = 106 (42.4 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH AV ++++ G L SGS DT V WDV ++ L++ +G ++ +T+ L
Sbjct: 104 GHKAAVTALQYDQLGGRLVSGSKDTDVIVWDVINESGLYRLKG-------HKDAVTQVL- 155
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
L L D + + + C ++ GH V + + L +G+
Sbjct: 156 -FLKEKNLLVTSGKDTLVKWWDL----DTQHCFKTLVGHRTEVWGMALVSEEKRLITGTA 210
Query: 228 DTTVRFWDVT 237
D+ +R WD+T
Sbjct: 211 DSELRVWDIT 220
Score = 71 (30.1 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ 142
+ GH +AV V F L + DT V++WD+ TQ
Sbjct: 144 LKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQ 180
Score = 63 (27.2 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 140
C ++ GH V + + L +G+ D+ +R WD+T
Sbjct: 182 CFKTLVGHRTEVWGMALVSEEKRLITGTADSELRVWDIT 220
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 273 (101.2 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 74/248 (29%), Positives = 130/248 (52%)
Query: 335 LTSHTRSVTCIRWG-GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
+ +H +V+ + G SG L+ + D + +W + +L GH V ++ L+T
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 393 LMRVEATSTGGFK-YDPANPEESSK--HALAKYQAQ-C-----PEGEKLVSGSDDFTLFL 443
+ V + +G + +D E++K L ++A C P GE + SGS D + L
Sbjct: 76 ELIVAGSQSGSIRVWDL----EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ + K + R GH Q + C+ FSPDG+ +ASA+ D ++KLWD GK ++ GH
Sbjct: 132 WDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
V +V + + LL SGS+D T++ W+++ ++ + G V ++ + PDG + SG
Sbjct: 191 PVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGC 250
Query: 564 KDKVLRLW 571
+D LR++
Sbjct: 251 QDS-LRVY 257
Score = 238 (88.8 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 79/304 (25%), Positives = 128/304 (42%)
Query: 109 HAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
HA V S+ +GR LA+G D V W + + G + + E +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTG-----HTSPVESVR--- 70
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPV--TRCTSSMPGHAEAVISVKFSPNGRSLASG 225
LNT E + + + +V + + ++ GH + S+ F P G +ASG
Sbjct: 71 -------LNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASG 123
Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285
S DT ++ WD+ + +F+ GH V C+ +SPD K L S + + WD + GK +
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI 345
+ GH + + FH N AS D IR WD+ Q V + V I
Sbjct: 184 E-FPGHTGPVNVVE---FHPNEYL--LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSI 237
Query: 346 RWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHW--VNTLALSTDYLMRVEATSTG 402
+ G +YS QD +++V+ + C + HW V LA+ + L+ V + +
Sbjct: 238 LFNPDGCCLYSGCQD-SLRVY-GWEPERCFDVV-LVHWGKVADLAICNNQLIGVAFSQSN 294
Query: 403 GFKY 406
Y
Sbjct: 295 VSSY 298
Score = 193 (73.0 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 64/229 (27%), Positives = 109/229 (47%)
Query: 57 LFYVNETEITKTLAD-VLPLDT--LNTEEVVDIVYQKQAVFQVRPV--TRCTSSMPGHAE 111
L+ +N+ +L P+++ LNT E + + + +V + + ++ GH
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
Query: 112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTLADVL 170
+ S+ F P G +ASGS DT ++ WD+ + +F+ G + + + + K LA
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 171 PLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTT 230
D +T ++ D+ K S PGH V V+F PN LASGS D T
Sbjct: 167 D-D--HTVKLWDLTAGKMM-----------SEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 231 VRFWDVTTQTPLFKC-EGHKHWVLCIAWSPDSKQLVSGCKNGV-IHAWD 277
+RFWD+ + + C EG V I ++PD L SGC++ + ++ W+
Sbjct: 213 IRFWDLE-KFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGWE 260
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 272 (100.8 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 66/232 (28%), Positives = 120/232 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + ++ S +D I+IWD +C R+LT HT SV C+++ +I + S D T++V
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD-ERVIITGSSDSTVRV 367
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G M TL H V L + ++ + +D A+P + + + L ++
Sbjct: 368 WDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV-WDMASPTDITLRRVLVGHR 426
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +WN + + + GH++ I C+++ R++ S S
Sbjct: 427 AAVNVVDFDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 483
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW++
Sbjct: 484 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 533
Score = 233 (87.1 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 67/248 (27%), Positives = 124/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q + + ++ V C+++ ++ S +D TIK+W S R L GH V L L
Sbjct: 294 QRIHCRSETSKGVYCLQYDDQKIV-SGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQ 350
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + + +S + N E H A + G +V+ S D ++ +W+
Sbjct: 351 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAVWD 409
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W+ +F+ TL GH +
Sbjct: 410 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR 467
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 468 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 523
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 524 YDGKIKVW 531
Score = 211 (79.3 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV T L H VL + ++
Sbjct: 335 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 392
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S T + + + GH+ + + ++ ++ ++SG
Sbjct: 393 --NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 444
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W+ + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 445 -DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 502
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 503 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 560
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + +VS S D T+ +W+
Sbjct: 561 LQFDEFQ-IVSSSHDDTILIWD 581
Score = 194 (73.4 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 72/284 (25%), Positives = 124/284 (43%)
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + SG D T++ WD +T GH VLC+ + D + +++G + + WD +
Sbjct: 314 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN 371
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLT 336
TG+ + + H + + HL + KD +I +WD+ + RVL
Sbjct: 372 TGEMLNTLIH-HCEAV-------LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLV 423
Query: 337 SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
H +V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 424 GHRAAVNVVDFDDKYIV-SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLV-V 480
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------P 446
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 481 SGSSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDP 539
Query: 447 EKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F D I S+S D +I +WD
Sbjct: 540 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 581
Score = 149 (57.5 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 49/184 (26%), Positives = 81/184 (44%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QTPLFKCEGTPYLFYV 157
C + GH +V+ +++ R + +GS D+TVR WDV T T + CE +L +
Sbjct: 335 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 392
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
N +T + D + + DI ++ V GH AV V F
Sbjct: 393 NGMMVTCS-KD-RSIAVWDMASPTDITLRRVLV--------------GHRAAVNVVDF-- 434
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+ + + S SGD T++ W+ +T + GHK + C+ + + +VSG + I WD
Sbjct: 435 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWD 492
Query: 278 SSTG 281
G
Sbjct: 493 IECG 496
Score = 142 (55.0 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 461 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 516
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 517 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDT 576
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 577 ILIWDFL 583
Score = 51 (23.0 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 123 RSLASGSGDTTVRFWDVTT---QTPLFKCEGTPY-LFYVNETEITKTLADVLPLDTLNTE 178
+ + SG D T++ WD +T + L G+ L Y IT + + + +NT
Sbjct: 314 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTG 373
Query: 179 EVVD-IVYQKQAVFQVR 194
E+++ +++ +AV +R
Sbjct: 374 EMLNTLIHHCEAVLHLR 390
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 271 (100.5 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 66/232 (28%), Positives = 120/232 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + ++ S +D I+IWD +C R+LT HT SV C+++ +I + S D T++V
Sbjct: 268 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD-ERVIITGSSDSTVRV 326
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G M TL H V L + ++ + +D A+P + + + L ++
Sbjct: 327 WDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV-WDMASPTDITLRRVLVGHR 385
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +WN + + + GH++ I C+++ R++ S S
Sbjct: 386 AAVNVVDFDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 442
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW++
Sbjct: 443 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 492
Score = 230 (86.0 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 66/248 (26%), Positives = 124/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q + + ++ V C+++ ++ S +D TIK+W + R L GH V L L
Sbjct: 253 QRIHCRSETSKGVYCLQYDDQKIV-SGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQ 309
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + + +S + N E H A + G +V+ S D ++ +W+
Sbjct: 310 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAVWD 368
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W+ +F+ TL GH +
Sbjct: 369 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR 426
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 427 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 482
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 483 YDGKIKVW 490
Score = 211 (79.3 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV T L H VL + ++
Sbjct: 294 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 351
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S T + + + GH+ + + ++ ++ ++SG
Sbjct: 352 --NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 403
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W+ + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 404 -DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 461
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 462 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 519
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + +VS S D T+ +W+
Sbjct: 520 LQFDEFQ-IVSSSHDDTILIWD 540
Score = 193 (73.0 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 72/284 (25%), Positives = 123/284 (43%)
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + SG D T++ WD T GH VLC+ + D + +++G + + WD +
Sbjct: 273 QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN 330
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLT 336
TG+ + + H + + HL + KD +I +WD+ + RVL
Sbjct: 331 TGEMLNTLIH-HCEAV-------LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLV 382
Query: 337 SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
H +V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 383 GHRAAVNVVDFDDKYIV-SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLV-V 439
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------P 446
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 440 SGSSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDP 498
Query: 447 EKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F D I S+S D +I +WD
Sbjct: 499 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 540
Score = 149 (57.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 49/184 (26%), Positives = 81/184 (44%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QTPLFKCEGTPYLFYV 157
C + GH +V+ +++ R + +GS D+TVR WDV T T + CE +L +
Sbjct: 294 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 351
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
N +T + D + + DI ++ V GH AV V F
Sbjct: 352 NGMMVTCS-KD-RSIAVWDMASPTDITLRRVLV--------------GHRAAVNVVDF-- 393
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+ + + S SGD T++ W+ +T + GHK + C+ + + +VSG + I WD
Sbjct: 394 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWD 451
Query: 278 SSTG 281
G
Sbjct: 452 IECG 455
Score = 142 (55.0 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 420 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 475
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 476 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDT 535
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 536 ILIWDFL 542
Score = 50 (22.7 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 123 RSLASGSGDTTVRFWDVTT---QTPLFKCEGTPY-LFYVNETEITKTLADVLPLDTLNTE 178
+ + SG D T++ WD T + L G+ L Y IT + + + +NT
Sbjct: 273 QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTG 332
Query: 179 EVVD-IVYQKQAVFQVR 194
E+++ +++ +AV +R
Sbjct: 333 EMLNTLIHHCEAVLHLR 349
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 214 (80.4 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 59/216 (27%), Positives = 103/216 (47%)
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD--PANPEESSKHA 418
++++W +G ++++ TLA S D T G + +E S
Sbjct: 69 SVRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT 128
Query: 419 LAKYQ---AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII 475
K+ A P+G+ L SG+ D + +++ K L + GH I + FSPD +++
Sbjct: 129 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL-LHTLEGHAMPIRSLTFSPDSQLL 187
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
+AS D IK++D + TL GH V VA+ D VS S+D ++KVW++ T+
Sbjct: 188 VTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 247
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
H D+V+ V + +G K+ S G D+ + ++
Sbjct: 248 CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 283
Score = 210 (79.0 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 63/242 (26%), Positives = 115/242 (47%)
Query: 337 SHTRSVTCIRWG-----GSGLIYSASQDRTIKVWRASDGVMCR--TLEGHAHWVNTLALS 389
+H ++ + WG S + + S D +KVW+ D + +LEGH L +
Sbjct: 14 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQ-----LGVV 68
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKE 449
+ L +E K A P ++ A + P+ + L +G+ + ++ E
Sbjct: 69 SVRLWDLENGKQ--IKSIDAGPVDAWTLAFS------PDSQYLATGTHVGKVNIFGVESG 120
Query: 450 KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVA 509
KK + T + +++ + +SPDG+ +AS + D I ++D GK + TL GH + +
Sbjct: 121 KKEYSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 179
Query: 510 WSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLR 569
+S DS+LLV+ S D +K+++++ + L GH V V + PD S DK ++
Sbjct: 180 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVK 239
Query: 570 LW 571
+W
Sbjct: 240 VW 241
Score = 209 (78.6 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 48/165 (29%), Positives = 83/165 (50%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
S+ + ++S+ +SP+G+ LASG+ D + +D+ T L EGH + + +SPDS
Sbjct: 125 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 184
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+ LV+ +G I +D G + GH W+ +++ P H F SS D ++
Sbjct: 185 QLLVTASDDGYIKIYDVQHANLAGT-LSGHASWVLNVAFCPDD-TH----FVSSSSDKSV 238
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVW 365
++WDV CV H V +++ G+G I S D+ I ++
Sbjct: 239 KVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 283
Score = 174 (66.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 46/169 (27%), Positives = 83/169 (49%)
Query: 212 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG 271
++ FSP+ + LA+G+ V + V + + + ++L IA+SPD K L SG +G
Sbjct: 93 TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 152
Query: 272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC 331
+I+ +D +TGK + + GH I +L++ P + ++ DG I+I+DV +
Sbjct: 153 IINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKIYDVQHANL 206
Query: 332 VRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVMCRTLEGH 379
L+ H V + + + S+S D+++KVW T H
Sbjct: 207 AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH 255
Score = 146 (56.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 65/243 (26%), Positives = 105/243 (43%)
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQ-WITALSWEPFHLNHQCRR 311
L + WS + QL G + + WD GKQI G W A S + +L
Sbjct: 54 LDLQWSLEGHQL--GVVS--VRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL------ 103
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDG 370
A+ G + I+ V + L + + + I + G + S + D I ++ + G
Sbjct: 104 -ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 162
Query: 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDP--ANPEES-SKHALAKYQ-AQ 425
+ TLEGHA + +L S D + V A+ G K YD AN + S HA A
Sbjct: 163 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF 222
Query: 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIK 485
CP+ VS S D ++ +W+ + + HQ + V+++ +G I S D+ I
Sbjct: 223 CPDDTHFVSSSSDKSVKVWDVGT-RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIH 281
Query: 486 LWD 488
++D
Sbjct: 282 IYD 284
Score = 142 (55.0 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 44/173 (25%), Positives = 80/173 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S+ + ++S+ +SP+G+ LASG+ D + +D+ T L EG + + +
Sbjct: 125 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--HAMPIRSLTFSP 182
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
D L T + + + I Y Q ++ GHA V++V F P+ S
Sbjct: 183 ---DSQLLVTASDDGYIKI-YDVQHA-------NLAGTLSGHASWVLNVAFCPDDTHFVS 231
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
S D +V+ WDV T+T + H+ V + ++ + ++VS + IH +D
Sbjct: 232 SSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
Score = 130 (50.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 33/124 (26%), Positives = 54/124 (43%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GHA + S+ FSP+ + L + S D ++ +DV GH WVL +A+ PD
Sbjct: 167 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 226
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
VS + + WD T + H+ + + + N + S G D I
Sbjct: 227 THFVSSSSDKSVKVWDVGTRTCV-HTFFDHQDQVWGVKY-----NGNGSKIVSVGDDQEI 280
Query: 322 RIWD 325
I+D
Sbjct: 281 HIYD 284
Score = 115 (45.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 27/104 (25%), Positives = 52/104 (50%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+ + LV+ SDD + +++ + + ++GH + V F PD S+S DKS+K+
Sbjct: 182 PDSQLLVTASDDGYIKIYDVQHANLA-GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKV 240
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
WD + T H V+ V ++ + +VS D + +++
Sbjct: 241 WDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
Score = 59 (25.8 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 206 HAEAVISVKFSPNGR----SLASGSGDTTVRFWDVTTQT-PL-FKCEGHKHWVLCIA-WS 258
H +A+ SV + N + ++ +GS D V+ W + L + EGH+ V+ + W
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVRLWD 74
Query: 259 PDSKQLVSGCKNGVIHAW 276
++ + + G + AW
Sbjct: 75 LENGKQIKSIDAGPVDAW 92
Score = 39 (18.8 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 109 HAEAVISVKFSPNGR----SLASGSGDTTVRFW 137
H +A+ SV + N + ++ +GS D V+ W
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVW 47
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 271 (100.5 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 66/232 (28%), Positives = 120/232 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + ++ S +D I+IWD +C R+LT HT SV C+++ +I + S D T++V
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD-ERVIITGSSDSTVRV 367
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G M TL H V L + ++ + +D A+P + + + L ++
Sbjct: 368 WDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV-WDMASPTDITLRRVLVGHR 426
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +WN + + + GH++ I C+++ R++ S S
Sbjct: 427 AAVNVVDFDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 483
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW++
Sbjct: 484 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 533
Score = 245 (91.3 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 83/297 (27%), Positives = 139/297 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D +++VSG ++ I WD ST + + + GH + L ++ R
Sbjct: 306 VYCLQY--DDQKIVSGLRDNTIKIWDKST-LECKRILTGHTGSVLCLQYDE-------RV 355
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW-RAS-- 368
+ D +R+WDV + + L H +V +R+ +G++ + S+DR+I VW AS
Sbjct: 356 IITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMASPT 414
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE-----ESSKHALAKY 422
D + R L GH VN + Y+ V A+ K ++ + E K +A
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDKYI--VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL 472
Query: 423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK 482
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++D
Sbjct: 473 QYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAYDG 526
Query: 483 SIKLWD--------GRIGKF-ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
IK+WD G + TL H V+ + + D +VS S D T+ +W+
Sbjct: 527 KIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 581
Score = 233 (87.1 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 67/248 (27%), Positives = 124/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q + + ++ V C+++ ++ S +D TIK+W S R L GH V L L
Sbjct: 294 QRIHCRSETSKGVYCLQYDDQKIV-SGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQ 350
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + + +S + N E H A + G +V+ S D ++ +W+
Sbjct: 351 YDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAVWD 409
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W+ +F+ TL GH +
Sbjct: 410 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR 467
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 468 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 523
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 524 YDGKIKVW 531
Score = 206 (77.6 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 67/262 (25%), Positives = 118/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV L H VL + ++
Sbjct: 335 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN 392
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S T + + + GH+ + + ++ ++ ++SG
Sbjct: 393 --NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 444
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W+ + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 445 -DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 502
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 503 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFR 560
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + +VS S D T+ +W+
Sbjct: 561 LQFDEFQ-IVSSSHDDTILIWD 581
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 67/232 (28%), Positives = 103/232 (44%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE---GHKHWVLCIAWSPDSK 262
H EAV+ ++F+ NG + + S D ++ WD+ + T + GH+ V + + D K
Sbjct: 382 HCEAVLHLRFN-NGM-MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDK 437
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
+VS + I W++ST + + + + GHK+ I L + R S D IR
Sbjct: 438 YIVSASGDRTIKVWNTSTCEFV-RTLNGHKRGIACLQYRD-------RLVVSGSSDNTIR 489
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW--------RASDGVMC- 373
+WD+ C+RVL H V CIR+ ++ S + D IKVW RA G +C
Sbjct: 490 LWDIECGACLRVLEGHEELVRCIRFDNKRIV-SGAYDGKIKVWDLMAALDPRAPAGTLCL 548
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATST---GGFKYDPANPEESSKHALAKY 422
RTL H+ V L ++ T F DPA E + Y
Sbjct: 549 RTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPATHAEPPRSPSRTY 600
Score = 189 (71.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 71/284 (25%), Positives = 123/284 (43%)
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + SG D T++ WD +T GH VLC+ + D + +++G + + WD +
Sbjct: 314 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN 371
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLT 336
G+ + + H + + HL + KD +I +WD+ + RVL
Sbjct: 372 AGEMLNTLIH-HCEAV-------LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLV 423
Query: 337 SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
H +V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 424 GHRAAVNVVDFDDKYIV-SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLV-V 480
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------P 446
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 481 SGSSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALDP 539
Query: 447 EKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F D I S+S D +I +WD
Sbjct: 540 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 581
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/184 (26%), Positives = 80/184 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QTPLFKCEGTPYLFYV 157
C + GH +V+ +++ R + +GS D+TVR WDV T + CE +L +
Sbjct: 335 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN 392
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
N +T + D + + DI ++ V GH AV V F
Sbjct: 393 NGMMVTCS-KD-RSIAVWDMASPTDITLRRVLV--------------GHRAAVNVVDF-- 434
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+ + + S SGD T++ W+ +T + GHK + C+ + + +VSG + I WD
Sbjct: 435 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWD 492
Query: 278 SSTG 281
G
Sbjct: 493 IECG 496
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 271 (100.5 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 66/232 (28%), Positives = 120/232 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + ++ S +D I+IWD +C R+LT HT SV C+++ +I + S D T++V
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD-ERVIITGSSDSTVRV 367
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G M TL H V L + ++ + +D A+P + + + L ++
Sbjct: 368 WDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV-WDMASPTDITLRRVLVGHR 426
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +WN + + + GH++ I C+++ R++ S S
Sbjct: 427 AAVNVVDFDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 483
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW++
Sbjct: 484 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 533
Score = 245 (91.3 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 83/297 (27%), Positives = 139/297 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D +++VSG ++ I WD ST + + + GH + L ++ R
Sbjct: 306 VYCLQY--DDQKIVSGLRDNTIKIWDKST-LECKRILTGHTGSVLCLQYDE-------RV 355
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW-RAS-- 368
+ D +R+WDV + + L H +V +R+ +G++ + S+DR+I VW AS
Sbjct: 356 IITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMASPT 414
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE-----ESSKHALAKY 422
D + R L GH VN + Y+ V A+ K ++ + E K +A
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDKYI--VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL 472
Query: 423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK 482
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++D
Sbjct: 473 QYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAYDG 526
Query: 483 SIKLWD--------GRIGKF-ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
IK+WD G + TL H V+ + + D +VS S D T+ +W+
Sbjct: 527 KIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 581
Score = 233 (87.1 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 67/248 (27%), Positives = 124/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q + + ++ V C+++ ++ S +D TIK+W S R L GH V L L
Sbjct: 294 QRIHCRSETSKGVYCLQYDDQKIV-SGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQ 350
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + + +S + N E H A + G +V+ S D ++ +W+
Sbjct: 351 YDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAVWD 409
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W+ +F+ TL GH +
Sbjct: 410 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR 467
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 468 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 523
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 524 YDGKIKVW 531
Score = 206 (77.6 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 67/262 (25%), Positives = 118/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV L H VL + ++
Sbjct: 335 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN 392
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S T + + + GH+ + + ++ ++ ++SG
Sbjct: 393 --NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 444
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W+ + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 445 -DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 502
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 503 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFR 560
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + +VS S D T+ +W+
Sbjct: 561 LQFDEFQ-IVSSSHDDTILIWD 581
Score = 189 (71.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 71/284 (25%), Positives = 123/284 (43%)
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + SG D T++ WD +T GH VLC+ + D + +++G + + WD +
Sbjct: 314 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN 371
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLT 336
G+ + + H + + HL + KD +I +WD+ + RVL
Sbjct: 372 AGEMLNTLIH-HCEAV-------LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLV 423
Query: 337 SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
H +V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 424 GHRAAVNVVDFDDKYIV-SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLV-V 480
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------P 446
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 481 SGSSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALDP 539
Query: 447 EKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F D I S+S D +I +WD
Sbjct: 540 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 581
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/184 (26%), Positives = 80/184 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QTPLFKCEGTPYLFYV 157
C + GH +V+ +++ R + +GS D+TVR WDV T + CE +L +
Sbjct: 335 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN 392
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
N +T + D + + DI ++ V GH AV V F
Sbjct: 393 NGMMVTCS-KD-RSIAVWDMASPTDITLRRVLV--------------GHRAAVNVVDF-- 434
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+ + + S SGD T++ W+ +T + GHK + C+ + + +VSG + I WD
Sbjct: 435 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWD 492
Query: 278 SSTG 281
G
Sbjct: 493 IECG 496
Score = 143 (55.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 461 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 516
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 517 KRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDT 576
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 577 ILIWDFL 583
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 271 (100.5 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 66/232 (28%), Positives = 120/232 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + ++ S +D I+IWD +C R+LT HT SV C+++ +I + S D T++V
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD-ERVIITGSSDSTVRV 367
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G M TL H V L + ++ + +D A+P + + + L ++
Sbjct: 368 WDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV-WDMASPTDITLRRVLVGHR 426
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +WN + + + GH++ I C+++ R++ S S
Sbjct: 427 AAVNVVDFDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 483
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW++
Sbjct: 484 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 533
Score = 230 (86.0 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 66/248 (26%), Positives = 124/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q + + ++ V C+++ ++ S +D TIK+W + R L GH V L L
Sbjct: 294 QRIHCRSETSKGVYCLQYDDQKIV-SGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQ 350
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + + +S + N E H A + G +V+ S D ++ +W+
Sbjct: 351 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAVWD 409
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W+ +F+ TL GH +
Sbjct: 410 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR 467
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 468 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 523
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 524 YDGKIKVW 531
Score = 211 (79.3 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV T L H VL + ++
Sbjct: 335 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 392
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S T + + + GH+ + + ++ ++ ++SG
Sbjct: 393 --NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 444
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W+ + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 445 -DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 502
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 503 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 560
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + +VS S D T+ +W+
Sbjct: 561 LQFDEFQ-IVSSSHDDTILIWD 581
Score = 193 (73.0 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 72/284 (25%), Positives = 123/284 (43%)
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + SG D T++ WD T GH VLC+ + D + +++G + + WD +
Sbjct: 314 QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN 371
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLT 336
TG+ + + H + + HL + KD +I +WD+ + RVL
Sbjct: 372 TGEMLNTLIH-HCEAV-------LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLV 423
Query: 337 SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
H +V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 424 GHRAAVNVVDFDDKYIV-SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLV-V 480
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------P 446
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 481 SGSSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDP 539
Query: 447 EKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F D I S+S D +I +WD
Sbjct: 540 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 581
Score = 149 (57.5 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 49/184 (26%), Positives = 81/184 (44%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QTPLFKCEGTPYLFYV 157
C + GH +V+ +++ R + +GS D+TVR WDV T T + CE +L +
Sbjct: 335 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 392
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
N +T + D + + DI ++ V GH AV V F
Sbjct: 393 NGMMVTCS-KD-RSIAVWDMASPTDITLRRVLV--------------GHRAAVNVVDF-- 434
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+ + + S SGD T++ W+ +T + GHK + C+ + + +VSG + I WD
Sbjct: 435 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWD 492
Query: 278 SSTG 281
G
Sbjct: 493 IECG 496
Score = 142 (55.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 461 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 516
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 517 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDT 576
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 577 ILIWDFL 583
Score = 50 (22.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 123 RSLASGSGDTTVRFWDVTT---QTPLFKCEGTPY-LFYVNETEITKTLADVLPLDTLNTE 178
+ + SG D T++ WD T + L G+ L Y IT + + + +NT
Sbjct: 314 QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTG 373
Query: 179 EVVD-IVYQKQAVFQVR 194
E+++ +++ +AV +R
Sbjct: 374 EMLNTLIHHCEAVLHLR 390
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 249 (92.7 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 68/268 (25%), Positives = 125/268 (46%)
Query: 314 SSGKDGAIRIWDVILSQCVRV---LTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASD 369
+ G D +++WD+ +++ L H V + G I S+S D T+ +W A
Sbjct: 57 TGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARS 116
Query: 370 GVMCRTLE-GHAH-WVNTLALSTDYLMR-VEATSTGGFKYDPANPEESSKHALAKYQ--- 423
G L G W + Y++ + + + E++ KY
Sbjct: 117 GDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSI 176
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
A P+G+ + SG+ D + +++ K + + GH + + FSP+ +++ +AS D
Sbjct: 177 AYSPDGKYIASGAIDGIITIFDVAAGKV-VQTLEGHAMPVRSLCFSPNSQLLLTASDDGH 235
Query: 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
+KL+D + TL GH V VA+S D + S S+D+++K+W+ +K H
Sbjct: 236 MKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEH 295
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLW 571
D+V+ V ++P +KVAS +DK L ++
Sbjct: 296 TDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 217 (81.4 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 77/284 (27%), Positives = 130/284 (45%)
Query: 171 PLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTT 230
P D L T + D+V K Q + + GHA V+SV S +G+++AS S D+T
Sbjct: 51 PKDFLVTGGLDDLV--KVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDST 108
Query: 231 VRFWDVTT--QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
+ WD + + L W + +SP +K ++SG +G I + TGK
Sbjct: 109 MCLWDARSGDKKHLLSFGPVDLWT--VQFSPCNKYVISGLNDGKISMYSVETGKAEQTLD 166
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
+ ++ ++++ P + AS DG I I+DV + V+ L H V + +
Sbjct: 167 AQNGKYTLSIAYSP-----DGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFS 221
Query: 349 -GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-Y 406
S L+ +AS D +K++ + + TL GHA WV +A S D ++S K +
Sbjct: 222 PNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIW 281
Query: 407 DPANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLW 444
D + E H A++ Q P +K+ S S+D +L ++
Sbjct: 282 DTS--ERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 54/210 (25%), Positives = 92/210 (43%)
Query: 115 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDT 174
+V+FSP + + SG D + + V T K E T + T ++A P
Sbjct: 132 TVQFSPCNKYVISGLNDGKISMYSVETG----KAEQT---LDAQNGKYTLSIA-YSPDGK 183
Query: 175 LNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFW 234
+D + +F V + ++ GHA V S+ FSPN + L + S D ++ +
Sbjct: 184 YIASGAIDGII---TIFDVA-AGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLY 239
Query: 235 DVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQW 294
DVT + GH WVLC+A+S D K S + + WD+S K + H
Sbjct: 240 DVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCL-HTFAEHTDQ 298
Query: 295 ITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
+ + + P + + AS+ +D ++ I+
Sbjct: 299 VWGVRYSPGN-----DKVASASEDKSLNIY 323
Score = 152 (58.6 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 55/228 (24%), Positives = 104/228 (45%)
Query: 74 PLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTT 133
P D L T + D+V K Q + + GHA V+SV S +G+++AS S D+T
Sbjct: 51 PKDFLVTGGLDDLV--KVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDST 108
Query: 134 VRFWDVTTQTPLFKCEGTPY-LFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQ 192
+ WD + P L+ V + K + + LN ++ +Y +
Sbjct: 109 MCLWDARSGDKKHLLSFGPVDLWTVQFSPCNKYV-----ISGLNDGKIS--MYS----VE 157
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
+ + G + +S+ +SP+G+ +ASG+ D + +DV + EGH V
Sbjct: 158 TGKAEQTLDAQNG--KYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPV 215
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSW 300
+ +SP+S+ L++ +G + +D + +G + GH W+ +++
Sbjct: 216 RSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGT-LSGHASWVLCVAF 262
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 270 (100.1 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 66/232 (28%), Positives = 120/232 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + ++ S +D I+IWD +C R+LT HT SV C+++ +I + S D T++V
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD-ERVIITGSSDSTVRV 367
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G M TL H V L + ++ + +D A+P + + + L ++
Sbjct: 368 WDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV-WDMASPTDITLRRVLVGHR 426
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +WN + + + GH++ I C+++ R++ S S
Sbjct: 427 AAVNVVDFDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 483
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW++
Sbjct: 484 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 533
Score = 242 (90.2 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 82/297 (27%), Positives = 139/297 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D +++VSG ++ I WD +T + + + GH + L ++ R
Sbjct: 306 VYCLQY--DDQKIVSGLRDNTIKIWDKNT-LECKRILTGHTGSVLCLQYDE-------RV 355
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW-RAS-- 368
+ D +R+WDV + + L H +V +R+ +G++ + S+DR+I VW AS
Sbjct: 356 IITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMASPT 414
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE-----ESSKHALAKY 422
D + R L GH VN + Y+ V A+ K ++ + E K +A
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDKYI--VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL 472
Query: 423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK 482
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++D
Sbjct: 473 QYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAYDG 526
Query: 483 SIKLWD--------GRIGKF-ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
IK+WD G + TL H V+ + + D +VS S D T+ +W+
Sbjct: 527 KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 581
Score = 230 (86.0 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 66/248 (26%), Positives = 124/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q + + ++ V C+++ ++ S +D TIK+W + R L GH V L L
Sbjct: 294 QRIHCRSETSKGVYCLQYDDQKIV-SGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQ 350
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + + +S + N E H A + G +V+ S D ++ +W+
Sbjct: 351 YDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAVWD 409
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W+ +F+ TL GH +
Sbjct: 410 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR 467
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 468 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 523
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 524 YDGKIKVW 531
Score = 206 (77.6 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 68/232 (29%), Positives = 105/232 (45%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE---GHKHWVLCIAWSPDSK 262
H EAV+ ++F+ NG + + S D ++ WD+ + T + GH+ V + + D K
Sbjct: 382 HCEAVLHLRFN-NGM-MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDK 437
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
+VS + I W++ST + + + + GHK+ I L + R S D IR
Sbjct: 438 YIVSASGDRTIKVWNTSTCEFV-RTLNGHKRGIACLQYRD-------RLVVSGSSDNTIR 489
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW--------RASDGVMC- 373
+WD+ C+RVL H V CIR+ ++ S + D IKVW RA G +C
Sbjct: 490 LWDIECGACLRVLEGHEELVRCIRFDNKRIV-SGAYDGKIKVWDLVAALDPRAPAGTLCL 548
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATST---GGFKYDPANPEESSKHALAKY 422
RTL H+ V L ++ T F DPA ES++ Y
Sbjct: 549 RTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQAESTRSPSRTY 600
Score = 206 (77.6 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 67/262 (25%), Positives = 118/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV L H VL + ++
Sbjct: 335 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN 392
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S T + + + GH+ + + ++ ++ ++SG
Sbjct: 393 --NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 444
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W+ + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 445 -DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 502
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 503 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 560
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + +VS S D T+ +W+
Sbjct: 561 LQFDEFQ-IVSSSHDDTILIWD 581
Score = 188 (71.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 71/284 (25%), Positives = 122/284 (42%)
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + SG D T++ WD T GH VLC+ + D + +++G + + WD +
Sbjct: 314 QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN 371
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLT 336
G+ + + H + + HL + KD +I +WD+ + RVL
Sbjct: 372 AGEMLNTLIH-HCEAV-------LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLV 423
Query: 337 SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
H +V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 424 GHRAAVNVVDFDDKYIV-SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLV-V 480
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------P 446
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 481 SGSSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDP 539
Query: 447 EKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F D I S+S D +I +WD
Sbjct: 540 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 581
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/184 (26%), Positives = 80/184 (43%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QTPLFKCEGTPYLFYV 157
C + GH +V+ +++ R + +GS D+TVR WDV T + CE +L +
Sbjct: 335 CKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN 392
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
N +T + D + + DI ++ V GH AV V F
Sbjct: 393 NGMMVTCS-KD-RSIAVWDMASPTDITLRRVLV--------------GHRAAVNVVDF-- 434
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+ + + S SGD T++ W+ +T + GHK + C+ + + +VSG + I WD
Sbjct: 435 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWD 492
Query: 278 SSTG 281
G
Sbjct: 493 IECG 496
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 281 (104.0 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 116/485 (23%), Positives = 207/485 (42%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H + V+ FS + + +A+ S D V+ W+ T L + + VN T
Sbjct: 658 HEDEVLCCAFSADDKFIATCSVDKKVKIWNSMTGE-LVRIYDE-HSEQVNCCHFTNNSNH 715
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
+L L T + + + + Q C ++M GH +V +FSP+ + LAS S D
Sbjct: 716 LL-LATGSNDYFLKLWDLNQE--------ECRNTMFGHTNSVSHCRFSPDDQVLASCSAD 766
Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVL--------------CIAWSPDSKQLVSGCKNGVIH 274
T++ WDV + K K + L C +WS D +++ KN V
Sbjct: 767 GTLKLWDVKSANER-KSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKNKVF- 824
Query: 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV 334
+D + + + GH + + P H NH S + +W + V
Sbjct: 825 LFDIHSSGLLAEMHMGHHSAVQYCDFSP-H-NHLAVVALSQY---CVELWSMDSGLKVAD 879
Query: 335 LTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRA------SDGVMCRTLEGHAHWVNTLA 387
H V C+ + G + ++S D+TI++W S V+ + ++
Sbjct: 880 CRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSATVLKQEIDVVFQENEVTV 939
Query: 388 LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L+ D + R++ + + D + S L+ P + L G +D + +
Sbjct: 940 LAVDNIRRLQLINGNTGQIDYLTEAQVSCCCLS------PHLQYLAFGGEDGAIQILELL 993
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI-GKFITTLRGHVQAVY 506
+ +R GH+ + ++F+ DG+ + S+S D ++++W+ + F L+ H + V
Sbjct: 994 NNRIFQSR-NGHKTTVRHIQFTADGKTLISSSDDSAVQIWNWQSEDPFF--LQAHQETVK 1050
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
+SRLL S S D T+KVWN+ T++IE+D H D V + D + D K +S DK
Sbjct: 1051 DFRLLKNSRLL-SWSFDGTVKVWNIITRRIEKDFVCHQDTVLSCDISSDATKFSSTSADK 1109
Query: 567 VLRLW 571
++W
Sbjct: 1110 TAKIW 1114
Score = 270 (100.1 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 107/486 (22%), Positives = 193/486 (39%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C ++M GH +V +FSP+ + LAS S D T++ WDV + K F++N E
Sbjct: 737 CRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANER-KSINVKQ-FFLNSEE 794
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVF--QVRPVTRCTSSMPGHAEAVISVKFSPNG 219
+ L ++ + + + +V K VF + GH AV FSP+
Sbjct: 795 PQEDLEVIVKCCSWSADGAKIMVAAKNKVFLFDIHSSGLLAEMHMGHHSAVQYCDFSPHN 854
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
V W + + + C GH WV C+ +SPD ++ + I W++
Sbjct: 855 HLAVVALSQYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWET- 913
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV--LTS 337
K++ K T L E + Q D IR +I ++ LT
Sbjct: 914 --KKVC------KNSATVLKQE-IDVVFQENEVTVLAVDN-IRRLQLINGNTGQIDYLTE 963
Query: 338 HTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVE 397
S C+ L + +D I++ + + ++ GH V + + D +
Sbjct: 964 AQVSCCCLSPHLQYLAFGG-EDGAIQILELLNNRIFQSRNGHKTTVRHIQFTADGKTLIS 1022
Query: 398 ATSTGG---FKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
++ + + +P H + + +L+S S D T+ +WN +
Sbjct: 1023 SSDDSAVQIWNWQSEDPFFLQAHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITRRIE-K 1081
Query: 455 RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS 514
HQ + + S D +S S DK+ K+W + + LRGH V ++S ++
Sbjct: 1082 DFVCHQDTVLSCDISSDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSSFSVNN 1141
Query: 515 RLLVSGSADSTLKVWNMKTKK---------IEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
LL +G + +++WN+ + +E+ HG V + ++PD + + S G
Sbjct: 1142 TLLATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVTDLCFSPDTKMLVSAGG- 1200
Query: 566 KVLRLW 571
L+ W
Sbjct: 1201 -YLKWW 1205
Score = 233 (87.1 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 78/322 (24%), Positives = 143/322 (44%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H +AV FS +G+ +AS D T++ + T L + + H+ VLC A+S D K +
Sbjct: 616 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDKFIA 675
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ + + W+S TG+ + + H + + + + NH A+ D +++WD
Sbjct: 676 TCSVDKKVKIWNSMTGELV-RIYDEHSEQVNCCHFTN-NSNHLL--LATGSNDYFLKLWD 731
Query: 326 VILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
+ +C + HT SV+ R+ ++ S S D T+K+W +++ ++N
Sbjct: 732 LNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANERKSINVKQFFLN 791
Query: 385 TLALSTDYLMRVEATS--TGGFKYDPANPEE-------SS---------KHALAKYQAQC 426
+ D + V+ S G K A + SS H+ +Y
Sbjct: 792 SEEPQEDLEVIVKCCSWSADGAKIMVAAKNKVFLFDIHSSGLLAEMHMGHHSAVQYCDFS 851
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P V + + LW+ + K +A GH ++CV FSPDG ++S D++I+L
Sbjct: 852 PHNHLAVVALSQYCVELWSMDSGLK-VADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRL 910
Query: 487 WDGR-IGK-FITTLRGHVQAVY 506
W+ + + K T L+ + V+
Sbjct: 911 WETKKVCKNSATVLKQEIDVVF 932
Score = 202 (76.2 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 48/158 (30%), Positives = 82/158 (51%)
Query: 417 HALAKYQAQCPE-GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII 475
H A Y A E G+++ S D TL ++ E +K L + H+ + C FS D + I
Sbjct: 616 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEK-LLEIKAHEDEVLCCAFSADDKFI 674
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKT 533
A+ S DK +K+W+ G+ + H + V ++++S LL +GS D LK+W++
Sbjct: 675 ATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLWDLNQ 734
Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++ + GH + V ++PD + +AS D L+LW
Sbjct: 735 EECRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLW 772
Score = 174 (66.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 59/238 (24%), Positives = 106/238 (44%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R S GH V ++F+ +G++L S S D+ V+ W+ ++ P F + V +
Sbjct: 996 RIFQSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWNWQSEDPFFL---QAHQETVKDF 1052
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
+ K + +L T +V +I+ ++ + C H + V+S S +
Sbjct: 1053 RLLKN-SRLLSWSFDGTVKVWNIITRR-----IEKDFVC------HQDTVLSCDISSDAT 1100
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+S S D T + W +PL + GHK V C ++S ++ L +G NG I W+ S
Sbjct: 1101 KFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSSFSVNNTLLATGDDNGEIRIWNVSN 1160
Query: 281 GK--QIGQPM---RG---HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ 330
G+ + P+ G H W+T L + P + S+G G ++ W+V+ +
Sbjct: 1161 GELLHLCAPISVEEGAATHGGWVTDLCFSP-----DTKMLVSAG--GYLKWWNVVTGE 1211
Score = 169 (64.5 bits), Expect = 9.4e-09, Sum P(3) = 9.4e-09
Identities = 87/369 (23%), Positives = 153/369 (41%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH V V FSP+G S + S D T+R W+ T + C K+ + D
Sbjct: 882 GHLSWVHCVMFSPDGSSFLTSSDDQTIRLWE-TKKV----C---KNSATVLKQEID---- 929
Query: 265 VSGCKNGV-IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRI 323
V +N V + A D+ Q+ G ++T L+ + A G+DGAI+I
Sbjct: 930 VVFQENEVTVLAVDNIRRLQLINGNTGQIDYLTEAQVSCCCLSPHLQYLAFGGEDGAIQI 989
Query: 324 WDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW--RASDGVMCRTLEGHA 380
+++ ++ + H +V I++ G + S+S D +++W ++ D L+ H
Sbjct: 990 LELLNNRIFQSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWNWQSEDPFF---LQAHQ 1046
Query: 381 HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCP---EGEKLVSG 435
V L + + + + G K K + C + K S
Sbjct: 1047 ETVKDFRLLKNSRL-LSWSFDGTVKVWNIITRRIEKDFVCHQDTVLSCDISSDATKFSST 1105
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF- 494
S D T +W+ E L + GH+ + C FS + ++A+ + I++W+ G+
Sbjct: 1106 SADKTAKIWSFEL-LSPLHELRGHKGCVRCSSFSVNNTLLATGDDNGEIRIWNVSNGELL 1164
Query: 495 -----ITTLRG---HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
I+ G H V + +S D+++LVS A LK WN+ T + Q +G
Sbjct: 1165 HLCAPISVEEGAATHGGWVTDLCFSPDTKMLVS--AGGYLKWWNVVTGESSQTFYTNGTN 1222
Query: 547 VYAVDWAPD 555
+ + +PD
Sbjct: 1223 LKKIHVSPD 1231
Score = 164 (62.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 38/140 (27%), Positives = 72/140 (51%)
Query: 437 DDFTLFL-WNPEKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK 493
D+ L+L W +K K+L+R+ H + FS DG+ IAS DK+++++ G+
Sbjct: 591 DNGMLYLEWVNKKNMKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGE 650
Query: 494 FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA 553
+ ++ H V A+S+D + + + S D +K+WN T ++ + H ++V +
Sbjct: 651 KLLEIKAHEDEVLCCAFSADDKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFT 710
Query: 554 PDGEKV--ASGGKDKVLRLW 571
+ + A+G D L+LW
Sbjct: 711 NNSNHLLLATGSNDYFLKLW 730
Score = 130 (50.8 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEK--EKKSL------ARMTGHQQ----LINCVEFSPDGRI 474
P+ + L S S D TL LW+ + E+KS+ Q+ ++ C +S DG
Sbjct: 755 PDDQVLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAK 814
Query: 475 IASASFDKSIKLWDGRIGKFITTLR-GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
I A+ +K + L+D + + GH AV +S + L V + +++W+M +
Sbjct: 815 IMVAAKNK-VFLFDIHSSGLLAEMHMGHHSAVQYCDFSPHNHLAVVALSQYCVELWSMDS 873
Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
D GH V+ V ++PDG + D+ +RLW+
Sbjct: 874 GLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWE 912
Score = 51 (23.0 bits), Expect = 9.4e-09, Sum P(3) = 9.4e-09
Identities = 19/95 (20%), Positives = 33/95 (34%)
Query: 58 FYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVF--QVRPVTRCTSSMPGHAEAVIS 115
F++N E + L ++ + + + +V K VF + GH AV
Sbjct: 788 FFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKNKVFLFDIHSSGLLAEMHMGHHSAVQY 847
Query: 116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG 150
FSP+ V W + + + C G
Sbjct: 848 CDFSPHNHLAVVALSQYCVELWSMDSGLKVADCRG 882
Score = 43 (20.2 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 12/51 (23%), Positives = 27/51 (52%)
Query: 6 DKITTKRILTRFKSDDGEVAG-DLLDLPLNVNTEHLSLIVNSLLQQDEGTP 55
D + + + +S G+ G ++L L +N+ L +S++Q+ +G+P
Sbjct: 273 DSVMGPKYVVPVESGLGKEKGLEILSLFVNMKKADLPEQAHSIIQECKGSP 323
Score = 37 (18.1 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 323 IWDV-IL----SQCVRVLTSHTRSVT 343
IWD +L +QC +LT+ +SVT
Sbjct: 247 IWDPWVLKAFDNQCQILLTTRDKSVT 272
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 198 (74.8 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 47/151 (31%), Positives = 81/151 (53%)
Query: 424 AQCPEGEKLVSGSDDFTLFLWN-PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK 482
A P + L +GS D T LW P+ + L +GH++ + CV+FSP +++A+AS D
Sbjct: 486 AIAPNDKLLATGSQDRTAKLWALPQCQL--LGVFSGHRRGLWCVQFSPMDQVLATASADG 543
Query: 483 SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG 542
+IKLW + + T GH +V VA+ S L+S +D +K+W +K + + L
Sbjct: 544 TIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDA 603
Query: 543 HGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
H D+V+ + + + +G D + LW++
Sbjct: 604 HEDKVWGLHCSRLDDHALTGASDSRVILWKD 634
Score = 174 (66.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 68/307 (22%), Positives = 126/307 (41%)
Query: 71 DVLPLDTLNTEEVVDIVYQKQAVFQVRPV-TRCTSSMPGHAEAVISVKFSPNGRSLASGS 129
+VL + L E+ +V +V + T + GH + V+++ G AS +
Sbjct: 336 EVLDVRFLGPEDSHVVVASNSPCLKVFELQTSACQILHGHTDIVLALDVFRKGWLFASCA 395
Query: 130 GDTTVRFWDVTTQTPLFKC--EGTPYLFYVNETEITKTLADVLPLD----TLNTEEVVDI 183
D +VR W + + C +G+ + V ++ L T+ +
Sbjct: 396 KDQSVRIWRMNKAGQVM-CVAQGSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKA 454
Query: 184 VYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 242
+ K P+ + ++ H + + SV +PN + LA+GS D T + W + L
Sbjct: 455 LLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLL 514
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
GH+ + C+ +SP + L + +G I W + + GH + +++
Sbjct: 515 GVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCL-KTFEGHDASVLKVAFVS 573
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT---CIRWGGSGLIYSASQD 359
+ + SSG DG +++W + ++CVR L +H V C R L AS
Sbjct: 574 -----RGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDHALT-GASDS 627
Query: 360 RTIKVWR 366
R I +W+
Sbjct: 628 RVI-LWK 633
Score = 165 (63.1 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 44/154 (28%), Positives = 76/154 (49%)
Query: 432 LVSGSDDFTLFLWNPEKE--KKSLARMTG------------HQQLINCVEFSPDGRIIAS 477
LV+GS D T+ LW K K+ A G H + IN V +P+ +++A+
Sbjct: 437 LVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLAT 496
Query: 478 ASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE 537
S D++ KLW + + GH + ++ V +S ++L + SAD T+K+W ++
Sbjct: 497 GSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCL 556
Query: 538 QDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ GH V V + G ++ S G D +++LW
Sbjct: 557 KTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLW 590
Score = 154 (59.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 40/149 (26%), Positives = 75/149 (50%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+ E LV+ S L W ++ + H + + F P ++A+ D ++++
Sbjct: 76 PDNEVLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRV 135
Query: 487 WDGRIGKFITT--LRGHVQAVYMVAWSSD-SRLLVSGSA-DSTLKVWNMKTKKIEQDLPG 542
WD I + T RG V++VA+ D +RLL+ SA D+ ++VW+++ + L
Sbjct: 136 WD--IVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCLAVLTA 193
Query: 543 HGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
H V ++ ++ DG + S G+DK+ +W
Sbjct: 194 HYSAVTSLAFSADGHTMLSSGRDKICIIW 222
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 77/337 (22%), Positives = 132/337 (39%)
Query: 188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG 247
Q +Q VTR ++ H V ++ F P LA+G D VR WD+ G
Sbjct: 92 QWAWQEGSVTRLWKAI--HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRG 149
Query: 248 HKHWVLCIAWSPDSKQLV--SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL 305
V +A+ PD +L+ S + I W S + + H +T+L++
Sbjct: 150 SPGVVHLVAFHPDPTRLLLFSSATDAAIRVW-SLQDRSCLAVLTAHYSAVTSLAFSAD-- 206
Query: 306 NHQCRRFASSGKDGAIRIWDVILSQCVR---VLTSHTRSVTC-----IRWG--GSGLIYS 355
H SSG+D IWD+ Q R V S +V + G GL +
Sbjct: 207 GHT---MLSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFL 263
Query: 356 ASQDR-TIKVWRASDGVMCRTLE---GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP 411
+ D+ T++VW A+ G T G + L+ + + AT+ A
Sbjct: 264 TAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLLYEARS 323
Query: 412 EESSKHALAKYQAQC-------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN 464
K A Y + PE +V S+ L ++ E + + + GH ++
Sbjct: 324 LRLQKQ-FAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVF--ELQTSACQILHGHTDIVL 380
Query: 465 CVEFSPDGRIIASASFDKSIKLWD-GRIGKFITTLRG 500
++ G + AS + D+S+++W + G+ + +G
Sbjct: 381 ALDVFRKGWLFASCAKDQSVRIWRMNKAGQVMCVAQG 417
Score = 132 (51.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 68/323 (21%), Positives = 128/323 (39%)
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPV-TRCTSSMPGHAEAVISVKFSPNGRSLASGS 226
+VL + L E+ +V +V + T + GH + V+++ G AS +
Sbjct: 336 EVLDVRFLGPEDSHVVVASNSPCLKVFELQTSACQILHGHTDIVLALDVFRKGWLFASCA 395
Query: 227 GDTTVRFWDVTTQTPLFKC----EGHKHWV--LCIAWSPDSKQLVSGCKNGVIHAW---- 276
D +VR W + + C GH H V +C + +S LV+G ++ + W
Sbjct: 396 KDQSVRIWRMNKAGQVM-CVAQGSGHTHSVGTVCCSRLKESF-LVTGSQDCTVKLWPLPK 453
Query: 277 ---DSSTGKQIGQPM-------RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+T G + R H + I +++ P N + A+ +D ++W +
Sbjct: 454 ALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAP---NDKL--LATGSQDRTAKLWAL 508
Query: 327 ILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNT 385
Q + V + H R + C+++ ++ +AS D TIK+W D +T EGH V
Sbjct: 509 PQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLK 568
Query: 386 LALSTDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPE-GEKLVSGSDDFT 440
+A + + + S G K E + H + C + ++G+ D
Sbjct: 569 VAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDHALTGASDSR 628
Query: 441 LFLWNPEKEKKSLARMTGHQQLI 463
+ LW E + ++ +
Sbjct: 629 VILWKDVTEAEQAEEQARQEEQV 651
Score = 125 (49.1 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 44/173 (25%), Positives = 74/173 (42%)
Query: 208 EAVISVKFSPNGRSLASGSGDTTVR--FWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
E + + SP+ L + S + W + T L+K H V +A+ P S L
Sbjct: 67 EDITAFDLSPDNEVLVTASRALLLAQWAWQEGSVTRLWKAI-HTAPVATMAFDPTSTLLA 125
Query: 266 SGCKNGVIHAWDSSTGKQIG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
+G +G + WD + G RG + ++ FH + SS D AIR+W
Sbjct: 126 TGGCDGAVRVWDIV--RHYGTHHFRGSPGVVHLVA---FHPDPTRLLLFSSATDAAIRVW 180
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
+ C+ VLT+H +VT + + G + S+ +D+ +W RT+
Sbjct: 181 SLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTV 233
Score = 117 (46.2 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 86/381 (22%), Positives = 149/381 (39%)
Query: 91 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG 150
Q +Q VTR ++ H V ++ F P LA+G D VR WD+ G
Sbjct: 92 QWAWQEGSVTRLWKAI--HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRG 149
Query: 151 TPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAV 210
+P + + + D P L D + ++ Q R C + + H AV
Sbjct: 150 SPGVVH-----LVAFHPD--PTRLLLFSSATDAAIRVWSL-QDRS---CLAVLTAHYSAV 198
Query: 211 ISVKFSPNGRSLASGSGDTTVRFWDV----TTQT-PLFKCEGHKHWVLC----IAW---- 257
S+ FS +G ++ S D WD+ T+T P+F E + VL ++
Sbjct: 199 TSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVF--ESVEAAVLLPEEPVSQLGVK 256
Query: 258 SPDSKQLVSGCKNGVIHAWDSSTGKQI---GQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
SP L +G G + W++++G+ + QP G Q +T + L H +
Sbjct: 257 SPGLYFLTAG-DQGTLRVWEAASGQCVYTQAQPP-GPGQELTHCT-----LAHTAGVVLT 309
Query: 315 SGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG--SGLIYSASQDRTIKVWRASDGVM 372
+ D + +++ + + ++ V +R+ G + AS +KV+
Sbjct: 310 ATADHNLLLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFELQTSA- 368
Query: 373 CRTLEGHAHWVNTL-ALSTDYLMR--VEATSTGGFKYDPANP----EESSKHALAKYQAQ 425
C+ L GH V L +L + S ++ + A + S H +
Sbjct: 369 CQILHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVMCVAQGSGHTHSVGTVC 428
Query: 426 CPEGEK--LVSGSDDFTLFLW 444
C ++ LV+GS D T+ LW
Sbjct: 429 CSRLKESFLVTGSQDCTVKLW 449
Score = 108 (43.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 40/149 (26%), Positives = 73/149 (48%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEK--KSLARMTGH-QQLINCVEFSPDGRIIASASFDKSIK 485
G ++ D TL +W + + A+ G Q+L +C G ++ +A+ D ++
Sbjct: 259 GLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAG-VVLTATADHNLL 317
Query: 486 LWDGRIGKFITTLRGHVQAVYMVAW--SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
L++ R + G+ + V V + DS ++V+ ++ LKV+ ++T Q L GH
Sbjct: 318 LYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPC-LKVFELQTSAC-QILHGH 375
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
D V A+D G AS KD+ +R+W+
Sbjct: 376 TDIVLALDVFRKGWLFASCAKDQSVRIWR 404
Score = 93 (37.8 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 28/108 (25%), Positives = 49/108 (45%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P + L + S D T+ LW + + L GH + V F G + S+ D +KL
Sbjct: 531 PMDQVLATASADGTIKLWALQ-DFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKL 589
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534
W + + + TL H V+ + S ++G++DS + +W T+
Sbjct: 590 WTIKNNECVRTLDAHEDKVWGLHCSRLDDHALTGASDSRVILWKDVTE 637
Score = 66 (28.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 37/186 (19%), Positives = 74/186 (39%)
Query: 394 MRVEATSTGGFKY---DPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK 450
+RV ++G Y P P + H + A +++ + D L L+ +
Sbjct: 271 LRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGV-----VLTATADHNLLLYEA-RSL 324
Query: 451 KSLARMTGHQQLINCVEF-SPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVA 509
+ + G+ + + V F P+ + AS +K+++ + L GH V +
Sbjct: 325 RLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFELQTSA-CQILHGHTDIVLALD 383
Query: 510 WSSDSRLLVSGSADSTLKVWNM-KTKKIE--QDLPGHGDEVYAVDWAPDGEK-VASGGKD 565
L S + D ++++W M K ++ GH V V + E + +G +D
Sbjct: 384 VFRKGWLFASCAKDQSVRIWRMNKAGQVMCVAQGSGHTHSVGTVCCSRLKESFLVTGSQD 443
Query: 566 KVLRLW 571
++LW
Sbjct: 444 CTVKLW 449
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 275 (101.9 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 111/479 (23%), Positives = 199/479 (41%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H + V+ FS + +A+ S D V+ WD T + E + VN T
Sbjct: 656 HEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYE--EHSEQVNCCHFTNKSNH 713
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
+L L T + + + + Q C ++M GH +V +FSP+ LAS S D
Sbjct: 714 LL-LATGSNDSFLKLWDLNQK--------ECRNTMFGHTNSVTHCRFSPDDELLASCSAD 764
Query: 229 TTVRFWDVTTQTPLFKCEGHKHW-------------VLCIAWSPDSKQLVSGCKNGVIHA 275
T++ WDV + + + V C +WS D +++ KN V+
Sbjct: 765 GTLKLWDVRSANEKKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDRIIVAAKNKVL-L 823
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
D T + + GH I + P+ +H A S + +W++ V
Sbjct: 824 LDIHTSGLLTEIHTGHHSTIQYCDFSPY--DHLAV-IALS--QYCVELWNIDSRVKVADC 878
Query: 336 TSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLM 394
H V + + G + +AS D+TI+VW +C+ + + +M
Sbjct: 879 RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETRK--VCKNSAIVLKQEIDVVFQENEMM 936
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQAQC--PEGEKLVSGSDDFTLFLWNPEKEKKS 452
+ + G + + A+ C P E + G ++ + + +
Sbjct: 937 VLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEEGAIKIIELPNNRVF 996
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
+ + GH++ + ++F+ DG+ + S+S D I++W+ + +++ L+ H + V
Sbjct: 997 SSGI-GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVF-LQAHQETVKDFRLLR 1054
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
DSRLL S S D T+KVWN+ T +IE+D H V + + D K +S DK ++W
Sbjct: 1055 DSRLL-SWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW 1112
Score = 223 (83.6 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 103/480 (21%), Positives = 195/480 (40%)
Query: 109 HAEAVISVKFS--PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
H+E V F+ N LA+GS D+ ++ WD+ + +C T + + T +
Sbjct: 698 HSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQK----ECRNTMFGHTNSVTHCRFSP 753
Query: 167 ADVL--PLDTLNTEEVVDI--VYQKQAVFQVRPVTRCTSSMPGHAEAVISV-KFSPNGRS 221
D L T ++ D+ +K+++ V+ + P E ++ +S +G
Sbjct: 754 DDELLASCSADGTLKLWDVRSANEKKSI-NVKRFFLSSEDPPEDVEVIVKCCSWSADGDR 812
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCE-GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ + + V D+ T L + GH + +SP V + W+ +
Sbjct: 813 IIVAAKNK-VLLLDIHTSGLLTEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDS 871
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD---------VILSQC 331
++ RGH W+ + + P F ++ D IR+W+ ++L Q
Sbjct: 872 RVKVAD-CRGHLSWVHGVMFSP-----DGSSFLTASDDQTIRVWETRKVCKNSAIVLKQE 925
Query: 332 VRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+ V+ + GL A + I + V C L H +V
Sbjct: 926 IDVVFQENEMMVLAVDNIRGLQLIAGKTGQIDYLPEAQ-VSCCCLSPHLEYV-AFGDEEG 983
Query: 392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK 451
+ +E + F + +++ +H ++ A +G+ L+S S+D + +WN + E+
Sbjct: 984 AIKIIELPNNRVFSSGIGH-KKAVRHI--QFTA---DGKTLISSSEDSVIQVWNWQTEEY 1037
Query: 452 SLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS 511
+ HQ+ + D R++ S SFD ++K+W+ G+ H V A S
Sbjct: 1038 VF--LQAHQETVKDFRLLRDSRLL-SWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAIS 1094
Query: 512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
SD+ S SAD T K+W+ + +L GH V ++ DG +A+G + +R+W
Sbjct: 1095 SDATKFSSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIW 1154
Score = 190 (71.9 bits), Expect = 4.3e-20, Sum P(3) = 4.3e-20
Identities = 46/161 (28%), Positives = 75/161 (46%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H +AV FS +G+ +AS D T++ + T L + H+ VLC A+S D +
Sbjct: 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIA 673
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ + + WDS TGK + H + + + NH A+ D +++WD
Sbjct: 674 TCSVDKKVKIWDSGTGKLV-HTYEEHSEQVNCCHFTN-KSNHLL--LATGSNDSFLKLWD 729
Query: 326 VILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
+ +C + HT SVT R+ L+ S S D T+K+W
Sbjct: 730 LNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLW 770
Score = 170 (64.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 92/372 (24%), Positives = 153/372 (41%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH V V FSP+G S + S D T+R W+ T + C K+ + + D +
Sbjct: 880 GHLSWVHGVMFSPDGSSFLTASDDQTIRVWE-TRKV----C---KNSAIVLKQEID---V 928
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
V ++ A D+ G Q+ G ++ L+ A ++GAI+I
Sbjct: 929 VFQENEMMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEEGAIKII 988
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW--RASDGVMCRTLEGHAH 381
++ ++ H ++V I++ G + S+S+D I+VW + + V L+ H
Sbjct: 989 ELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVF---LQAHQE 1045
Query: 382 WVNTLAL---------STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL 432
V L S D ++V TG + D + A + K
Sbjct: 1046 TVKDFRLLRDSRLLSWSFDGTVKVWNVITGRIERD-----FTCHQGTVLSCAISSDATKF 1100
Query: 433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW---DG 489
S S D T +W+ E L + GH + C FS DG ++A+ + I++W DG
Sbjct: 1101 SSTSADKTAKIWSFELPSP-LHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDG 1159
Query: 490 RIGKF---ITTLRG---HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
++ I+ G H V V +S D ++LVS A LK WN+ T + Q +
Sbjct: 1160 QLLHLCAPISIEEGTATHGGWVTDVCFSPDRKMLVS--AGGYLKWWNVVTGESSQTFYTN 1217
Query: 544 GDEVYAVDWAPD 555
G + + +PD
Sbjct: 1218 GTNLKKIHVSPD 1229
Score = 167 (63.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 64/242 (26%), Positives = 104/242 (42%)
Query: 98 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYV 157
P R SS GH +AV ++F+ +G++L S S D+ ++ W+ T+ Y+F
Sbjct: 991 PNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEE---------YVFLQ 1041
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFS 216
E K L D+ D + V+ V +T R H V+S S
Sbjct: 1042 AHQETVKDFR--LLRDSRLLSWSFDGTVK---VWNV--ITGRIERDFTCHQGTVLSCAIS 1094
Query: 217 PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
+ +S S D T + W +PL + +GH V C A+S D L +G NG I W
Sbjct: 1095 SDATKFSSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIW 1154
Query: 277 DSSTGK--QIGQPM---RG---HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
+ S G+ + P+ G H W+T + + P + S+G G ++ W+V+
Sbjct: 1155 NVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSPDR-----KMLVSAG--GYLKWWNVVT 1207
Query: 329 SQ 330
+
Sbjct: 1208 GE 1209
Score = 163 (62.4 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 46/166 (27%), Positives = 81/166 (48%)
Query: 411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL-WNPEKEKKSLARMT--GHQQLINCVE 467
PE S + AK QA+ +++ +G L+L W +K K+L+R+ H +
Sbjct: 571 PETSEVYQQAKLQAK----QEVDTGR----LYLEWINKKTIKNLSRLVVRPHTDAVYHAC 622
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527
FS DG+ IAS DK+++++ G+ + ++ H V A+SSD + + S D +K
Sbjct: 623 FSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVK 682
Query: 528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV--ASGGKDKVLRLW 571
+W+ T K+ H ++V + + A+G D L+LW
Sbjct: 683 IWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLW 728
Score = 157 (60.3 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 38/179 (21%), Positives = 74/179 (41%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C ++M GH +V +FSP+ LAS S D T++ WDV + K F+++ +
Sbjct: 735 CRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANE--KKSINVKRFFLSSED 792
Query: 162 ITKTLADVLPLDTLNTE--EVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNG 219
+ + ++ + + + ++ K + + T GH + FSP
Sbjct: 793 PPEDVEVIVKCCSWSADGDRIIVAAKNKVLLLDIHTSGLLTEIHTGHHSTIQYCDFSPYD 852
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS 278
V W++ ++ + C GH WV + +SPD ++ + I W++
Sbjct: 853 HLAVIALSQYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWET 911
Score = 135 (52.6 bits), Expect = 4.3e-20, Sum P(3) = 4.3e-20
Identities = 43/151 (28%), Positives = 70/151 (46%)
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDG 489
+L+S S D T+ +WN + + R T HQ + S D +S S DK+ K+W
Sbjct: 1057 RLLSWSFDGTVKVWNVITGR--IERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSF 1114
Query: 490 RIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK---------IEQDL 540
+ + L+GH V A+S D LL +G + +++WN+ + IE+
Sbjct: 1115 ELPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGT 1174
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
HG V V ++PD + + S G L+ W
Sbjct: 1175 ATHGGWVTDVCFSPDRKMLVSAGG--YLKWW 1203
Score = 135 (52.6 bits), Expect = 4.3e-20, Sum P(3) = 4.3e-20
Identities = 44/160 (27%), Positives = 74/160 (46%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEK--EKKSL--AR--MTGH------QQLINCVEFSPDG-R 473
P+ E L S S D TL LW+ EKKS+ R ++ + ++ C +S DG R
Sbjct: 753 PDDELLASCSADGTLKLWDVRSANEKKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDR 812
Query: 474 IIASASFDKSIKLWDGRIGKFITTLR-GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
II +A + L D +T + GH + +S L V + +++WN+
Sbjct: 813 IIVAAK--NKVLLLDIHTSGLLTEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNID 870
Query: 533 TKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
++ D GH V+ V ++PDG + D+ +R+W+
Sbjct: 871 SRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910
Score = 117 (46.2 bits), Expect = 2.8e-12, Sum P(3) = 2.8e-12
Identities = 38/154 (24%), Positives = 67/154 (43%)
Query: 310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRAS 368
+R AS G D ++++ + + + +H V C + I + S D+ +K+W +
Sbjct: 628 QRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDSG 687
Query: 369 DGVMCRTLEGHAHWVNTLALS--TDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA-- 424
G + T E H+ VN + +++L+ ++ K N +E +
Sbjct: 688 TGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGHTNSVT 747
Query: 425 QC---PEGEKLVSGSDDFTLFLWNPEK--EKKSL 453
C P+ E L S S D TL LW+ EKKS+
Sbjct: 748 HCRFSPDDELLASCSADGTLKLWDVRSANEKKSI 781
Score = 48 (22.0 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 12/51 (23%), Positives = 29/51 (56%)
Query: 6 DKITTKRILTRFKSDDGEVAG-DLLDLPLNVNTEHLSLIVNSLLQQDEGTP 55
D + + + +S G+ G ++L L +N+ E L + +S++++ +G+P
Sbjct: 271 DSVMGPKYVIPVESGLGKEKGLEILSLFVNMKKEDLPVEAHSIIKECKGSP 321
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 255 (94.8 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 76/276 (27%), Positives = 126/276 (45%)
Query: 313 ASSGKDGAIRIWDVILSQCVR--VLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASD 369
AS G D I +W+V +C+ VL H ++ + W S IY+A D++I VW ++
Sbjct: 78 ASGGSDKEIFLWNVY-GECINYSVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWDSNK 136
Query: 370 GVMCRTLEGHAHWVNTL--ALSTDYLMRVEATSTGGFKYDPANPEESSKHALA-KYQAQ- 425
G + + + H+ VN+ A L+ + +D + + S H KY
Sbjct: 137 GELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRS--KGSTHLFQHKYPVTS 194
Query: 426 -C--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK 482
C ++L++G D + +W+ ++ L + HQ I S DG + S S D
Sbjct: 195 VCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDN 254
Query: 483 SIKLWDGRI----GKFITTLRG----HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534
S K+WD R + I T G + + +WS D R + GS+D + +W+ TK
Sbjct: 255 SCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTK 314
Query: 535 KIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL 570
+++ LPGH V V + P+ +AS DK + L
Sbjct: 315 QLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIYL 350
Score = 218 (81.8 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 79/299 (26%), Positives = 133/299 (44%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-EGHKHWVLCIAWSPDSKQ 263
GH + S KF+ G +LASG D + W+V + + +GHK +L + WS DS +
Sbjct: 60 GHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDSNE 119
Query: 264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRI 323
+ + C + I WDS+ G+ I + +R H + + P AS D + RI
Sbjct: 120 IYTACTDKSIGVWDSNKGELIKR-IREHSGVVNSCC--PARRGPPL--VASGSDDRSARI 174
Query: 324 WDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVW--RASDGVMCRTLEGHA 380
+D S+ L H VT + + S + + D I+VW R + + TL H
Sbjct: 175 FDT-RSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLY-TLASHQ 232
Query: 381 HWVNTLALSTD--YLMRVEATSTGGF----KYDPANPE----ESSKHALAKYQAQCP--- 427
+ + ++S D YL+ ++ Y P N +++ K +
Sbjct: 233 DTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSI 292
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
+G ++ GS D +++W+ ++ + GH +N V F P+ IIAS S DK+I L
Sbjct: 293 DGRRIGCGSSDRQVYIWDTNTKQLQYC-LPGHSGTVNEVTFHPNEPIIASCSSDKTIYL 350
Score = 163 (62.4 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 45/144 (31%), Positives = 73/144 (50%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L SG D +FLWN E + + + GH+ I + +S D I +A DKSI +WD
Sbjct: 74 GTALASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWD 133
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLV-SGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
G+ I +R H V + LV SGS D + ++++ ++K L H V
Sbjct: 134 SNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKG-STHLFQHKYPV 192
Query: 548 YAVDWAPDGEKVASGGKDKVLRLW 571
+V ++ +++ +GG D V+R+W
Sbjct: 193 TSVCFSDASDQLITGGIDNVIRVW 216
Score = 155 (59.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 75/332 (22%), Positives = 139/332 (41%)
Query: 222 LASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
++SG G + + T++ P+ + GHK + ++ L SG + I W+
Sbjct: 33 VSSGGGREIILGTERTSKLEHPIMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVY 92
Query: 280 TGKQIGQP-MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSH 338
G+ I ++GHK I L W ++ D +I +WD + ++ + H
Sbjct: 93 -GECINYSVLKGHKGTILELHWST-----DSNEIYTACTDKSIGVWDSNKGELIKRIREH 146
Query: 339 TRSVT--CIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS--TDYLM 394
+ V C G L+ S S DR+ +++ + H + V ++ S +D L+
Sbjct: 147 SGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQ-HKYPVTSVCFSDASDQLI 205
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQ------AQCPEGEKLVSGSDDFTLFLWN--- 445
+ +D N +E + LA +Q + +G L+S S D + +W+
Sbjct: 206 TGGIDNVIRV-WDIRN-QEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRP 263
Query: 446 ---PEKEKKSL--ARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG 500
P + K+ A+ + LI +S DGR I S D+ + +WD + L G
Sbjct: 264 YAPPNRNIKTFNGAQNNFEKNLIKS-SWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPG 322
Query: 501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
H V V + + ++ S S+D T+ + +K
Sbjct: 323 HSGTVNEVTFHPNEPIIASCSSDKTIYLGEIK 354
Score = 136 (52.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 35/146 (23%), Positives = 71/146 (48%)
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN-CVEFSPDGRIIASASFDKSIKL 486
+ ++ + D ++ +W+ K + + R+ H ++N C ++AS S D+S ++
Sbjct: 116 DSNEIYTACTDKSIGVWDSNKGEL-IKRIREHSGVVNSCCPARRGPPLVASGSDDRSARI 174
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE-QDLPGHGD 545
+D R K T L H V V +S S L++G D+ ++VW+++ ++ L H D
Sbjct: 175 FDTR-SKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQD 233
Query: 546 EVYAVDWAPDGEKVASGGKDKVLRLW 571
+ + + DG + S D ++W
Sbjct: 234 TITSTSVSKDGAYLLSNSMDNSCKIW 259
Score = 120 (47.3 bits), Expect = 0.00033, P = 0.00033
Identities = 58/266 (21%), Positives = 103/266 (38%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
S + GH ++ + +S + + + D ++ WD + + L K + VN
Sbjct: 99 SVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWD-SNKGELIK-RIREHSGVVNSCCPA 156
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
+ PL +++ + +F R ++ ++ + H V SV FS L
Sbjct: 157 RRGP---PLVASGSDD------RSARIFDTR--SKGSTHLFQHKYPVTSVCFSDASDQLI 205
Query: 224 SGSGDTTVRFWDVTTQT-PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
+G D +R WD+ Q PL+ H+ + + S D L+S + WD +
Sbjct: 206 TGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDI---R 262
Query: 283 QIGQPMRGHKQWITALS-WEPFHLNHQC----RRFASSGKDGAIRIWDVILSQCVRVLTS 337
P R K + A + +E + RR D + IWD Q L
Sbjct: 263 PYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPG 322
Query: 338 HTRSVTCIRWG-GSGLIYSASQDRTI 362
H+ +V + + +I S S D+TI
Sbjct: 323 HSGTVNEVTFHPNEPIIASCSSDKTI 348
Score = 118 (46.6 bits), Expect = 0.00056, P = 0.00056
Identities = 66/286 (23%), Positives = 113/286 (39%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH + S KF+ G +LASG D + W+V + C +N + +
Sbjct: 60 GHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGE-----C--------INYSVLKGHKG 106
Query: 168 DVLPLD-TLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL-ASG 225
+L L + ++ E+ K + H+ V S + G L ASG
Sbjct: 107 TILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASG 166
Query: 226 SGDTTVRFWDVTTQ--TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S D + R +D ++ T LF+ HK+ V + +S S QL++G + VI WD +
Sbjct: 167 SDDRSARIFDTRSKGSTHLFQ---HKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQED 223
Query: 284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT----SHT 339
+ H+ IT+ S +S K IR + ++ ++ +
Sbjct: 224 PLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPY-APPNRNIKTFNGAQNNFE 282
Query: 340 RSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
+++ W G I S DR + +W + + L GH+ VN
Sbjct: 283 KNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVN 328
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 266 (98.7 bits), Expect = 4.6e-20, P = 4.6e-20
Identities = 88/301 (29%), Positives = 130/301 (43%)
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
GQ + +K +T+L W N + A+ DG RIW L H +
Sbjct: 215 GQDVPSNKD-VTSLDW-----NSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFA 267
Query: 345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA------HWV--NTLA-LSTDYLM 394
++W G I SA D+T +W A G + H+ W NT A STD M
Sbjct: 268 LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTD--M 325
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
+ G + +++ K+ P G L S SDD TL LW+ K+ +
Sbjct: 326 CIHVCKLGQERPIKTFQGHTNEVNAIKWD---PTGNLLASCSDDMTLKLWSM-KQDTCVH 381
Query: 455 RMTGHQQLINCVEFSPDG----------RIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
+ H + I +++SP G + SASFD +++LWD G I TL H +
Sbjct: 382 DLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEP 441
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK 564
VY VA+S D R L SGS D + +WN ++ + G G ++ V W G+KV +
Sbjct: 442 VYSVAFSPDGRHLASGSFDKCVHIWNTQSGALVNSYRGTGG-IFEVCWNSTGDKVGASAS 500
Query: 565 D 565
D
Sbjct: 501 D 501
Score = 222 (83.2 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 63/265 (23%), Positives = 118/265 (44%)
Query: 326 VILSQCVRVL---TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
++L C+R + VT + W G L+ + S D ++W DG + TL H
Sbjct: 205 LVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKG 263
Query: 382 WVNTLALST--DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSGS 436
+ L + ++++ T +D E + H+ S S
Sbjct: 264 PIFALKWNKKGNFILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCS 322
Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496
D + + +E+ + GH +N +++ P G ++AS S D ++KLW + +
Sbjct: 323 TDMCIHVCKLGQERP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVH 381
Query: 497 TLRGHVQAVYMVAWSS--------DSRLLVSGSA--DSTLKVWNMKTKKIEQDLPGHGDE 546
L+ H + +Y + WS ++ L+++ SA DST+++W+ + L H +
Sbjct: 382 DLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEP 441
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
VY+V ++PDG +ASG DK + +W
Sbjct: 442 VYSVAFSPDGRHLASGSFDKCVHIW 466
Score = 200 (75.5 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 73/301 (24%), Positives = 121/301 (40%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFY---VNET-EIT 163
GH V ++P LASGSGD+T R W+++ + G+ L + E +
Sbjct: 163 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSESST----GGSTQLVLRHCIREGGQDV 218
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFSPNGRSL 222
+ DV LD N+E + ++ S++ H + ++K++ G +
Sbjct: 219 PSNKDVTSLDW-NSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFI 277
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV-IHAWDSSTG 281
S D T WD T + H L + W S + C + IH
Sbjct: 278 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--SNNTFASCSTDMCIHVCKLGQE 335
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341
+ I + +GH + A+ W+P AS D +++W + CV L +H++
Sbjct: 336 RPI-KTFQGHTNEVNAIKWDPTG-----NLLASCSDDMTLKLWSMKQDTCVHDLQAHSKE 389
Query: 342 VTCIRWGGSG-----------LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST 390
+ I+W +G L SAS D T+++W A G TL H V ++A S
Sbjct: 390 IYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSP 449
Query: 391 D 391
D
Sbjct: 450 D 450
Score = 158 (60.7 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 53/244 (21%), Positives = 96/244 (39%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV-----------ILSQCVRVL- 335
+RGH+ + +W P AS D RIW++ +L C+R
Sbjct: 161 LRGHESEVFICAWNPVS-----DLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGG 215
Query: 336 --TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST-- 390
+ VT + W G L+ + S D ++W DG + TL H + L +
Sbjct: 216 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKG 274
Query: 391 DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
++++ T +D E + H+ S S D + +
Sbjct: 275 NFILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLG 333
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+E+ + GH +N +++ P G ++AS S D ++KLW + + L+ H + +Y
Sbjct: 334 QERP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYT 392
Query: 508 VAWS 511
+ WS
Sbjct: 393 IKWS 396
Score = 139 (54.0 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 59/276 (21%), Positives = 114/276 (41%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGTPYLFYVNETE 161
S++ H + ++K++ G + S D T WD T F P L + +
Sbjct: 256 STLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDV--DWQ 313
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
T A + +T+ + + + Q RP+ + GH V ++K+ P G
Sbjct: 314 SNNTFA------SCSTDMCIHVC----KLGQERPI----KTFQGHTNEVNAIKWDPTGNL 359
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD-------SKQLV---SGCKNG 271
LAS S D T++ W + T + + H + I WSP + L+ S +
Sbjct: 360 LASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDS 419
Query: 272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC 331
+ WD+ G I + H++ + ++++ P R AS D + IW+ +Q
Sbjct: 420 TVRLWDAERGACI-HTLTKHQEPVYSVAFSP-----DGRHLASGSFDKCVHIWN---TQS 470
Query: 332 VRVLTSH--TRSVTCIRWGGSG-LIYSASQDRTIKV 364
++ S+ T + + W +G + +++ D ++ V
Sbjct: 471 GALVNSYRGTGGIFEVCWNSTGDKVGASASDGSVCV 506
Score = 138 (53.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 33/139 (23%), Positives = 62/139 (44%)
Query: 427 PEGEKLVSGSDDFTLFLWN-PEKEKKSLARMT-------GHQQL-----INCVEFSPDGR 473
P + L SGS D T +WN E ++ G Q + + ++++ +G
Sbjct: 175 PVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGT 234
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++A+ S+D ++W + G +TL H ++ + W+ ++S D T +W+ T
Sbjct: 235 LLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT 293
Query: 534 KKIEQDLPGHGDEVYAVDW 552
+ +Q P H VDW
Sbjct: 294 GEAKQQFPFHSAPALDVDW 312
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 55/230 (23%), Positives = 97/230 (42%)
Query: 107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
P H+ + V + N + AS S D + + + P+ +G + NE K
Sbjct: 301 PFHSAPALDVDWQSNN-TFASCSTDMCIHVCKLGQERPIKTFQG-----HTNEVNAIKW- 353
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----- 221
D P L D+ + ++ ++ T C + H++ + ++K+SP G
Sbjct: 354 -D--PTGNLLASCSDDMTLK---LWSMKQDT-CVHDLQAHSKEIYTIKWSPTGPGTNNPN 406
Query: 222 ----LA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
LA S S D+TVR WD + H+ V +A+SPD + L SG + +H W
Sbjct: 407 ANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIW 466
Query: 277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
++ +G + RG I + W N + +S DG++ + D+
Sbjct: 467 NTQSGALVNS-YRG-TGGIFEVCW-----NSTGDKVGASASDGSVCVLDL 509
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 50/189 (26%), Positives = 79/189 (41%)
Query: 95 QVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYL 154
Q RP+ + GH V ++K+ P G LAS S D T++ W + T + +
Sbjct: 334 QERPI----KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKE 389
Query: 155 FYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQ--VR--PVTR--CTSSMPGHAE 208
Y + T P T N +++ + A F VR R C ++ H E
Sbjct: 390 IYTIKWSPTG------P-GTNNPN--ANLMLARSASFDSTVRLWDAERGACIHTLTKHQE 440
Query: 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC 268
V SV FSP+GR LASGS D V W+ + + G + + W+ ++ +
Sbjct: 441 PVYSVAFSPDGRHLASGSFDKCVHIWNTQSGALVNSYRG-TGGIFEVCWNSTGDKVGASA 499
Query: 269 KNGVIHAWD 277
+G + D
Sbjct: 500 SDGSVCVLD 508
Score = 130 (50.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK-------TKKI------E--QDLPG 542
LRGH V++ AW+ S LL SGS DST ++WN+ T+ + E QD+P
Sbjct: 161 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVPS 220
Query: 543 HGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ D V ++DW +G +A+G D R+W
Sbjct: 221 NKD-VTSLDWNSEGTLLATGSYDGFARIW 248
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 206 (77.6 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 67/274 (24%), Positives = 127/274 (46%)
Query: 315 SGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCR 374
SG +I+IW+ QC+R +T + G ++ + ++++ + G +
Sbjct: 432 SGAAESIKIWNRSTLQCIRTMTCEYALCSFFVPGDRQVVIGTKTGK-LQLYDLASGNLLE 490
Query: 375 TLEGHAHWVNTLALSTDYLMRVEATSTGGFKY---DPANPEESSKHALAKYQAQ------ 425
T++ H + +L+LS D V + K+ + E S++ L+ Q +
Sbjct: 491 TVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDE 550
Query: 426 ---CPE---GEKLVSGSD-DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
C +KL++ S D T+ ++ + K L+ + GH+ + C++ S DG +IA+
Sbjct: 551 EVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLS-LYGHKLPVICMDISYDGALIATG 609
Query: 479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ 538
S D+++K+W G +L H +V + + S L + D +K W+ + Q
Sbjct: 610 SADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDADKFEHVQ 669
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
L GH E++ + +P G+ V S DK LRLW+
Sbjct: 670 TLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLWE 703
Score = 198 (74.8 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 73/314 (23%), Positives = 138/314 (43%)
Query: 194 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL--FKCEGHKHW 251
+PV ++ GH V ++ FS + ++ SG+ ++ ++ W+ +T + CE +
Sbjct: 402 QPVRTSRITIGGHRSDVRTLSFSSDNIAVLSGAAES-IKIWNRSTLQCIRTMTCE----Y 456
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
LC + P +Q+V G K G + +D ++G + + + H + +LS P R
Sbjct: 457 ALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLL-ETVDAHDGALWSLSLSPDQ-----RG 510
Query: 312 FASSGKDGAIRIWDVIL-----SQCVRVLTSHTRS------VTCIRWGGSGLIYSASQ-D 359
F + G D +++ WD L S R+ TR+ V C+ + + + + S D
Sbjct: 511 FVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLD 570
Query: 360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL 419
T+K++ +L GH V + +S D + ++ K + + K
Sbjct: 571 CTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLF 630
Query: 420 AK-----YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRI 474
A Y P+ + D + W+ +K + + + GH Q I C+ SP G
Sbjct: 631 AHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDADKFEH-VQTLEGHHQEIWCLAISPSGDY 689
Query: 475 IASASFDKSIKLWD 488
+ S+S DKS++LW+
Sbjct: 690 VVSSSHDKSLRLWE 703
Score = 176 (67.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 83/352 (23%), Positives = 152/352 (43%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH AV S+K+ G LASGS DT + WDV ++ L++ +GHK + + + L
Sbjct: 105 GHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLL 164
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
VS K+ ++ WD T + + + GH+ + W ++ + +R + D +R W
Sbjct: 165 VSSGKDTMVKWWDLDT-QHCFKTVVGHRTEV----WGLVLVSEE-KRLITGASDSELRAW 218
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSGLIYSA--SQDRTIKVWRA-SDGVM-CRTL---- 376
D+ + + I+ G S + ++D T+++ A D ++ CR
Sbjct: 219 DIAYLE--EIEDPEEPEPKKIK-GSSPRMQDTDETEDGTLEMDEAPEDRILTCRKAGSIM 275
Query: 377 -EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG 435
EG VN T ++ T + + + EE K + K + + KL SG
Sbjct: 276 REGRDRVVNLAVDRTGRILACHGTDSVLEVFRVLSIEEIQKK-MDKKLKKARKKAKLNSG 334
Query: 436 SDDFTLFLWNPEKE-KKSLARMTGHQQLINCVEF----SPDGRIIASASFDKS-IKLWD- 488
++ + E + + R+T + F SP G + A + ++L+
Sbjct: 335 KEEEEDLEVSVEMTLQDEIQRVTNIKTSAKIKSFDVIHSPQGELKAVFLLQNNLVELYSV 394
Query: 489 -------GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
+ T+ GH V +++SSD+ ++SG+A+S +K+WN T
Sbjct: 395 YPSVPASQPVRTSRITIGGHRSDVRTLSFSSDNIAVLSGAAES-IKIWNRST 445
Score = 173 (66.0 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 72/312 (23%), Positives = 135/312 (43%)
Query: 97 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFY 156
+PV ++ GH V ++ FS + ++ SG+ ++ ++ W+ +T +C T Y
Sbjct: 402 QPVRTSRITIGGHRSDVRTLSFSSDNIAVLSGAAES-IKIWNRST----LQCIRTMTCEY 456
Query: 157 VNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFS 216
+ +P D + V+ K ++ + ++ H A+ S+ S
Sbjct: 457 A-------LCSFFVPGDR---QVVIGTKTGKLQLYDLAS-GNLLETVDAHDGALWSLSLS 505
Query: 217 PNGRSLASGSGDTTVRFWDV-------TTQTPLFKCEGHK----HWVLCIAWSPDSKQLV 265
P+ R +G D +V+FWD +TQ L + VLC+++SP+ K L
Sbjct: 506 PDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLA 565
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ + + T K + GHK + + +++ A+ D ++IW
Sbjct: 566 VSLLDCTVKIFYVDTLKFF-LSLYGHKLPVICMD-----ISYDGALIATGSADRNVKIWG 619
Query: 326 VILSQCVRVLTSHTRSVTCIRW-GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAH--W 382
+ C + L +H SV +++ S L ++A +DR IK W A +TLEGH W
Sbjct: 620 LDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDADKFEHVQTLEGHHQEIW 679
Query: 383 VNTLALSTDYLM 394
++ S DY++
Sbjct: 680 CLAISPSGDYVV 691
Score = 157 (60.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 38/155 (24%), Positives = 76/155 (49%)
Query: 421 KYQAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIA 476
K++ C P+G L G +D ++ +++ + ++ GH+ + +++ G +A
Sbjct: 65 KHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVT-FNGHKAAVTSLKYDQLGGRLA 123
Query: 477 SASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI 536
S S D I +WD + L+GH A+ + + LLVS D+ +K W++ T+
Sbjct: 124 SGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDTQHC 183
Query: 537 EQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ + GH EV+ + + +++ +G D LR W
Sbjct: 184 FKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAW 218
Score = 153 (58.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 56/224 (25%), Positives = 97/224 (43%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEIT 163
++ H A+ S+ SP+ R +G D +V+FWD L K E T V +T
Sbjct: 491 TVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFE----LVKDENSTQKRLSVKQTRTL 546
Query: 164 KTLADVLPLDTLNTEEV--VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
+ +VL + +++ V ++ +F V + + S+ GH VI + S +G
Sbjct: 547 QLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTL-KFFLSLYGHKLPVICMDISYDGAL 605
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+A+GS D V+ W + H V+ + + P S + K+ I WD+
Sbjct: 606 IATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDADKF 665
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ + Q + GH Q I L+ P SS D ++R+W+
Sbjct: 666 EHV-QTLEGHHQEIWCLAISP-----SGDYVVSSSHDKSLRLWE 703
Score = 151 (58.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 66/268 (24%), Positives = 113/268 (42%)
Query: 231 VRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRG 290
V WD+ + +G KH V C+ SPD L G ++G I + +G+ G
Sbjct: 47 VFIWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEG-NVTFNG 105
Query: 291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT-CIRWGG 349
HK +T+L ++ R AS KD I +WDVI + L H ++T +
Sbjct: 106 HKAAVTSLKYDQLG-----GRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLRE 160
Query: 350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDP 408
L+ S+ +D +K W +T+ GH V L L ++ + S + +D
Sbjct: 161 KNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWDI 220
Query: 409 ANPEE---SSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN-PEKE----KKSLARMT-GH 459
A EE + K + P + ++D TL + PE +K+ + M G
Sbjct: 221 AYLEEIEDPEEPEPKKIKGSSPRMQD-TDETEDGTLEMDEAPEDRILTCRKAGSIMREGR 279
Query: 460 QQLINCVEFSPDGRIIASASFDKSIKLW 487
+++N + GRI+A D ++++
Sbjct: 280 DRVVN-LAVDRTGRILACHGTDSVLEVF 306
Score = 141 (54.7 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG 500
+F+W+ K +K L + G + + C+ SPDG +A D SI+++ G+ T G
Sbjct: 47 VFIWDLRKGEKILI-LQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNG 105
Query: 501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVA 560
H AV + + L SGS D+ + VW++ + L GH D + + + +
Sbjct: 106 HKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLV 165
Query: 561 SGGKDKVLRLW 571
S GKD +++ W
Sbjct: 166 SSGKDTMVKWW 176
Score = 117 (46.2 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 43/169 (25%), Positives = 71/169 (42%)
Query: 119 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTE 178
SP+G LA G D ++R + L EG F ++ +T D L +
Sbjct: 74 SPDGLHLAVGYEDGSIRIFS------LLSGEGN-VTFNGHKAAVTSLKYDQLGGRLASGS 126
Query: 179 EVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 238
+ DI+ V + R + GH +A+ F L S DT V++WD+ T
Sbjct: 127 KDTDIIVWD--VINESGLYR----LKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDT 180
Query: 239 QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
Q GH+ V + + K+L++G + + AWD + ++I P
Sbjct: 181 QHCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWDIAYLEEIEDP 229
Score = 117 (46.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 63/268 (23%), Positives = 105/268 (39%)
Query: 194 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVL 253
R +C +M E + F P R + G+ ++ +D+ + L + H +
Sbjct: 443 RSTLQCIRTMT--CEYALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLLETVDAHDGALW 500
Query: 254 CIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMR--GHKQWITA-LSWEPFHLNHQCR 310
++ SPD + V+G + + WD K + KQ T L E +++
Sbjct: 501 SLSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPN 560
Query: 311 R--FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC--IRWGGSGLIYSASQDRTIKVWR 366
+ A S D ++I+ V + L H V C I + G+ LI + S DR +K+W
Sbjct: 561 QKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGA-LIATGSADRNVKIWG 619
Query: 367 ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ--- 423
G ++L H V L + A K A+ E + +Q
Sbjct: 620 LDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDADKFEHVQTLEGHHQEIW 679
Query: 424 --AQCPEGEKLVSGSDDFTLFLWNPEKE 449
A P G+ +VS S D +L LW +E
Sbjct: 680 CLAISPSGDYVVSSSHDKSLRLWERTRE 707
Score = 109 (43.4 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 35/129 (27%), Positives = 58/129 (44%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH AV S+K+ G LASGS DT + WDV ++ L++ +G ++ IT+ L
Sbjct: 105 GHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKG-------HKDAITQAL- 156
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
L L D + + + C ++ GH V + + L +G+
Sbjct: 157 -FLREKNLLVSSGKDTMVKWWDL----DTQHCFKTVVGHRTEVWGLVLVSEEKRLITGAS 211
Query: 228 DTTVRFWDV 236
D+ +R WD+
Sbjct: 212 DSELRAWDI 220
Score = 68 (29.0 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ 142
+ GH +A+ F L S DT V++WD+ TQ
Sbjct: 145 LKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDTQ 181
Score = 55 (24.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
C ++ GH V + + L +G+ D+ +R WD+
Sbjct: 183 CFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWDI 220
Score = 46 (21.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 16/73 (21%), Positives = 36/73 (49%)
Query: 499 RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK 558
+G ++AV+++ + V S ++ V +T +I + GH +V + ++ D
Sbjct: 375 QGELKAVFLLQNNLVELYSVYPSVPASQPV---RTSRIT--IGGHRSDVRTLSFSSDNIA 429
Query: 559 VASGGKDKVLRLW 571
V SG + + ++W
Sbjct: 430 VLSGAAESI-KIW 441
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 245 (91.3 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 68/247 (27%), Positives = 123/247 (49%)
Query: 337 SHTRSVTCIRWG-----GSGLIYSASQDRTIKVWRASDG--VMCRTLEGHAHWVNTLALS 389
+H ++ + WG GS L+ S S D +KVW+ SD + TLEGH V ++ +S
Sbjct: 14 AHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVS 73
Query: 390 TDYLMRVEATSTGGFK-YDPANPEE----SSKHALAKYQAQCPEGEKLVSGSDDFTLFLW 444
+ ++ + +D + ++ + A A P+ + L +GS + ++
Sbjct: 74 PSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIF 133
Query: 445 NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
E KK + T + +++ + +SPDG+ +AS + D I ++D GK + TL GH
Sbjct: 134 GVETGKKEYSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMP 192
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK 564
+ + +S DS+LLV+ S D +K++ ++ + L GHG V V ++PD S
Sbjct: 193 IRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSS 252
Query: 565 DKVLRLW 571
DK +++W
Sbjct: 253 DKSVKVW 259
Score = 226 (84.6 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 73/290 (25%), Positives = 128/290 (44%)
Query: 291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW---DVILSQCVRVLTSHTRSVTCIRW 347
H+ I ++ W + N S D +++W D L + L H V +
Sbjct: 15 HEDAIWSVGWGK-NSNDGSELVISGSLDDLVKVWKWSDERL-ELQSTLEGHQLGVVSVDV 72
Query: 348 GGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG--- 403
SG ++ S+S D I++W G R ++ ++A S D + G
Sbjct: 73 SPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNI 132
Query: 404 FKYDPANPEES--SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
F + E S ++ A P+G+ L SG+ D + +++ K L + GH
Sbjct: 133 FGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL-LHTLEGHAM 191
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
I + FSPD +++ +AS D IK+++ + TL GH V VA+S D VS S
Sbjct: 192 PIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSS 251
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+D ++KVW++ + H D+V+ V + +G K+ S D+ + ++
Sbjct: 252 SDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVY 301
Score = 196 (74.1 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 73/279 (26%), Positives = 127/279 (45%)
Query: 109 HAEAVISV---KFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
H +A+ SV K S +G L SGS D V+ W + + + + T + ++
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDER--LELQST-----LEGHQLGV 67
Query: 165 TLADVLPLDTLNTEEVVDI---VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
DV P + +D ++ ++ Q+R + G +A SV FSP+ +
Sbjct: 68 VSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDA------GPVDAW-SVAFSPDSQH 120
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
LA+GS V + V T + + ++L IA+SPD K L SG +G+I+ +D +TG
Sbjct: 121 LATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 180
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341
K + + GH I +L++ P + ++ DG I+I++V + L+ H
Sbjct: 181 KLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKIYEVQHASLAATLSGHGSW 234
Query: 342 VTCIRWGGSGLIY-SASQDRTIKVWRASDGVMCRTLEGH 379
V + + + S+S D+++KVW S T H
Sbjct: 235 VLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDH 273
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 72/307 (23%), Positives = 134/307 (43%)
Query: 237 TTQTPLFKCE-GHKHWVLCIAW---SPDSKQLV-SGCKNGVIHAWDSSTGK-QIGQPMRG 290
T + LFK E H+ + + W S D +LV SG + ++ W S + ++ + G
Sbjct: 3 TQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEG 62
Query: 291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-G 349
H+ + ++ P ASS D IR+WD+ + +R + + + +
Sbjct: 63 HQLGVVSVDVSP-----SGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPD 117
Query: 350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDP 408
S + + S + ++ G +L+ ++ ++A S D G +D
Sbjct: 118 SQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 409 ANPE---ESSKHALA-KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR-MTGHQQLI 463
A + HA+ + P+ + LV+ SDD + ++ E + SLA ++GH +
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY--EVQHASLAATLSGHGSWV 235
Query: 464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD 523
V FSPD S+S DKS+K+WD + T H V+ V ++ + +VS + D
Sbjct: 236 LNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADD 295
Query: 524 STLKVWN 530
+ V++
Sbjct: 296 QEIHVYD 302
Score = 180 (68.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 53/199 (26%), Positives = 95/199 (47%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
S++ GH V+SV SP+G +AS S D +R WD+ + + + P V+ +
Sbjct: 58 STLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGP----VDAWSVA 113
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
+ D L T + V+I F V + S+ + ++S+ +SP+G+ LA
Sbjct: 114 FS-PDSQHLATGSHVGKVNI-------FGVETGKK-EYSLDTRGKFILSIAYSPDGKYLA 164
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
SG+ D + +D+ T L EGH + + +SPDS+ LV+ +G I ++
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHAS- 223
Query: 284 IGQPMRGHKQWITALSWEP 302
+ + GH W+ +++ P
Sbjct: 224 LAATLSGHGSWVLNVAFSP 242
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 36/146 (24%), Positives = 73/146 (50%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P G + S S D + LW+ E K+ A G + V FSPD + +A+ S + +
Sbjct: 74 PSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWS-VAFSPDSQHLATGSHVGKVNI 132
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
+ GK +L + + +A+S D + L SG+ D + ++++ T K+ L GH
Sbjct: 133 FGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMP 192
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLWQ 572
+ ++ ++PD + + + D +++++
Sbjct: 193 IRSLTFSPDSQLLVTASDDGYIKIYE 218
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 44/173 (25%), Positives = 85/173 (49%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S+ + ++S+ +SP+G+ LASG+ D + +D+ T L EG + + +
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--HAMPIRSLTFSP 200
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
D L T + D Y K +++V+ + +++ GH V++V FSP+ S
Sbjct: 201 ---DSQLLVTAS-----DDGYIK--IYEVQHAS-LAATLSGHGSWVLNVAFSPDDTHFVS 249
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
S D +V+ WDV+ +T + H+ V + ++ + ++VS + IH +D
Sbjct: 250 SSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 265 (98.3 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 69/232 (29%), Positives = 117/232 (50%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + + S +D I+IWD QCV+ L HT SV C+++ +I S S D T++V
Sbjct: 216 LQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDK-VIISGSSDSTVRV 274
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G M TL H V L + ++ + +D +P E + + L ++
Sbjct: 275 WDVNTGEMVNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV-WDMTSPSEITLRRVLVGHR 333
Query: 424 AQCPE---GEK-LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A EK +VS S D T+ +W+ + + + GH++ I C+++ R++ S S
Sbjct: 334 AAVNVVDFDEKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 390
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
D SI+LWD G + L GH + V + + D++ +VSG+ D +KVW++
Sbjct: 391 SDNSIRLWDIECGACLRVLEGHEELVRCIRF--DTKRIVSGAYDGKIKVWDL 440
Score = 242 (90.2 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 67/242 (27%), Positives = 125/242 (51%)
Query: 336 TSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMR 395
+ +++ V C+++ G I S +D TIK+W +D +TL GH V L L D +
Sbjct: 207 SENSKGVYCLQYD-DGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSV--LCLQYDDKVI 263
Query: 396 VEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK 451
+ +S + N E H A + G +V+ S D ++ +W+ +
Sbjct: 264 ISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAVWDMTSPSE 322
Query: 452 -SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVA 509
+L R + GH+ +N V+F D + I SAS D++IK+W +F+ TL GH + + +
Sbjct: 323 ITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 380
Query: 510 WSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLR 569
+ RL+VSGS+D+++++W+++ + L GH + V + + D +++ SG D ++
Sbjct: 381 YRD--RLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRF--DTKRIVSGAYDGKIK 436
Query: 570 LW 571
+W
Sbjct: 437 VW 438
Score = 237 (88.5 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 82/299 (27%), Positives = 136/299 (45%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D ++VSG ++ I WD T Q + + GH + L ++ +
Sbjct: 213 VYCLQY--DDGKIVSGLRDNTIKIWDR-TDLQCVKTLMGHTGSVLCLQYDD-------KV 262
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW---RAS 368
S D +R+WDV + V L H +V +R+ +G++ + S+DR+I VW S
Sbjct: 263 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMTSPS 321
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLM--------RVEATSTGGFKYDPANPEESSKHALA 420
+ + R L GH VN + Y++ +V +TST F K +A
Sbjct: 322 EITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWSTSTCEF----VRTLNGHKRGIA 377
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
Q + +VSGS D ++ LW+ E L + GH++L+ C+ F D + I S ++
Sbjct: 378 CLQYR---DRLVVSGSSDNSIRLWDIECGA-CLRVLEGHEELVRCIRF--DTKRIVSGAY 431
Query: 481 DKSIKLWD------GRIGK---FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
D IK+WD R + TL H V+ + + D +VS S D T+ +W+
Sbjct: 432 DGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQF--DEFQIVSSSHDDTILIWD 488
Score = 212 (79.7 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 66/263 (25%), Positives = 124/263 (47%)
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW 257
+C ++ GH +V+ +++ + + + SGS D+TVR WDV T + H VL + +
Sbjct: 241 QCVKTLMGHTGSVLCLQY--DDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF 298
Query: 258 SPDSKQLVSGCKNGVIHAWDSSTGKQIG--QPMRGHKQWITALSWEPFHLNHQCRRFASS 315
+ + +V+ K+ I WD ++ +I + + GH+ + + ++ ++ ++S
Sbjct: 299 N--NGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYI------VSAS 350
Query: 316 GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRT 375
G D I++W + VR L H R + C+++ L+ S S D +I++W G R
Sbjct: 351 G-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNSIRLWDIECGACLRV 408
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFK-YD---PANPEESS---------KHALAKY 422
LEGH V + T + V G K +D +P +S +H +
Sbjct: 409 LEGHEELVRCIRFDTKRI--VSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVF 466
Query: 423 QAQCPEGEKLVSGSDDFTLFLWN 445
+ Q E + +VS S D T+ +W+
Sbjct: 467 RLQFDEFQ-IVSSSHDDTILIWD 488
Score = 201 (75.8 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 76/298 (25%), Positives = 133/298 (44%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
+++ V +++ +G+ + SG D T++ WD T + GH VLC+ + D K ++
Sbjct: 209 NSKGVYCLQYD-DGK-IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQY--DDKVII 264
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
SG + + WD +TG+ + + H + + HL + KD +I +WD
Sbjct: 265 SGSSDSTVRVWDVNTGEMVNTLIH-HCEAV-------LHLRFNNGMMVTCSKDRSIAVWD 316
Query: 326 VILSQCV---RVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHW 382
+ + RVL H +V + + ++ SAS DRTIKVW S RTL GH
Sbjct: 317 MTSPSEITLRRVLVGHRAAVNVVDFDEKYIV-SASGDRTIKVWSTSTCEFVRTLNGHKRG 375
Query: 383 VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDD 438
+ L D L+ V +S + + L ++ +C + +++VSG+ D
Sbjct: 376 IACLQYR-DRLV-VSGSSDNSIRLWDIECGACLR-VLEGHEELVRCIRFDTKRIVSGAYD 432
Query: 439 FTLFLWN------PEKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+ +W+ P +L T H + ++F D I S+S D +I +WD
Sbjct: 433 GKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQF--DEFQIVSSSHDDTILIWD 488
Score = 152 (58.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QTPLFKCEGTPYLFY 156
+C ++ GH +V+ +++ + + + SGS D+TVR WDV T T + CE +L +
Sbjct: 241 QCVKTLMGHTGSVLCLQY--DDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF 298
Query: 157 VNETEITKTL-ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKF 215
N +T + + D + E+ +R V + GH AV V F
Sbjct: 299 NNGMMVTCSKDRSIAVWDMTSPSEIT-----------LRRV------LVGHRAAVNVVDF 341
Query: 216 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA 275
+ + S SGD T++ W +T + GHK + C+ + + +VSG + I
Sbjct: 342 DE--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNSIRL 397
Query: 276 WDSSTG 281
WD G
Sbjct: 398 WDIECG 403
Score = 132 (51.5 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 36/129 (27%), Positives = 58/129 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D ++R WD+ L EGH+ V CI + D+
Sbjct: 368 TLNGHKRGIACLQY--RDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRF--DT 423
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITAL---SWEPFHLNHQCRRFASSGKD 318
K++VSG +G I WD + + + L + F L + SS D
Sbjct: 424 KRIVSGAYDGKIKVWDLVAA--LDPRAASNTLCLNTLVEHTGRVFRLQFDEFQIVSSSHD 481
Query: 319 GAIRIWDVI 327
I IWD +
Sbjct: 482 DTILIWDFL 490
Score = 53 (23.7 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 20/91 (21%), Positives = 47/91 (51%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVT----TQTPLFKCEGTPYLFYVNETEITK 164
+++ V +++ +G+ + SG D T++ WD T +T + L Y ++ I+
Sbjct: 209 NSKGVYCLQYD-DGK-IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVIISG 266
Query: 165 TLADVLPLDTLNTEEVVD-IVYQKQAVFQVR 194
+ + + +NT E+V+ +++ +AV +R
Sbjct: 267 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLR 297
Score = 46 (21.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 17/79 (21%), Positives = 37/79 (46%)
Query: 20 DDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTLADVLPLDTLN 79
DDG++ L D + + V +L+ L Y ++ I+ + + + +N
Sbjct: 219 DDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVN 278
Query: 80 TEEVVD-IVYQKQAVFQVR 97
T E+V+ +++ +AV +R
Sbjct: 279 TGEMVNTLIHHCEAVLHLR 297
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 265 (98.3 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 65/233 (27%), Positives = 122/233 (52%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + + S +D +I+IWD +C++VLT HT SV C+++ +I + S D T++V
Sbjct: 219 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRV 277
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G + TL H V L S ++ + +D A+P + + + L ++
Sbjct: 278 WDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAV-WDMASPTDITLRRVLVGHR 336
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +W+ + + + GH++ I C+++ R++ S S
Sbjct: 337 AAVNVVDFDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 393
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW+++
Sbjct: 394 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 444
Score = 238 (88.8 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 81/299 (27%), Positives = 138/299 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D ++++SG ++ I WD T + + + GH + L ++ R
Sbjct: 216 VYCLQY--DDEKIISGLRDNSIKIWDK-TSLECLKVLTGHTGSVLCLQYDE-------RV 265
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW-RAS-- 368
+ D +R+WDV + + L H +V +R+ +GL+ + S+DR+I VW AS
Sbjct: 266 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTCSKDRSIAVWDMASPT 324
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLM--------RVEATSTGGFKYDPANPEESSKHALA 420
D + R L GH VN + Y++ +V +TST F K +A
Sbjct: 325 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEF----VRTLNGHKRGIA 380
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++
Sbjct: 381 CLQYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAY 434
Query: 481 DKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
D IK+WD + + TL H V+ + + D ++S S D T+ +W+
Sbjct: 435 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 491
Score = 229 (85.7 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 66/248 (26%), Positives = 125/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q ++ + +++ V C+++ +I S +D +IK+W + + L GH V L L
Sbjct: 204 QRIQCRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQ 260
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + V +S + N E H A + G +V+ S D ++ +W+
Sbjct: 261 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-LMVTCSKDRSIAVWD 319
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W +F+ TL GH +
Sbjct: 320 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 377
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 378 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 433
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 434 YDGKIKVW 441
Score = 217 (81.4 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 68/262 (25%), Positives = 118/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV T L H VL + +S
Sbjct: 245 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 302
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S T + + + GH+ + + ++ ++ ++SG
Sbjct: 303 --NGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 354
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 355 -DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 412
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 413 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 470
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + ++S S D T+ +W+
Sbjct: 471 LQFDEFQ-IISSSHDDTILIWD 491
Score = 196 (74.1 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 73/282 (25%), Positives = 126/282 (44%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+ SG D +++ WD T+ L GH VLC+ + D + +V+G + + WD +TG
Sbjct: 226 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTG 283
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSH 338
+ + + H + + HL + KD +I +WD+ + RVL H
Sbjct: 284 EVLNTLIH-HNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGH 335
Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
+V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 336 RAAVNVVDFDDKYIV-SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLV-VSG 392
Query: 399 TSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------PEK 448
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 393 SSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 451
Query: 449 EKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F + +II+S S D +I +WD
Sbjct: 452 PASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWD 491
Score = 150 (57.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 50/182 (27%), Positives = 83/182 (45%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C + GH +V+ +++ R + +GS D+TVR WDV T L T L + NE
Sbjct: 245 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVL----NT--LIHHNEAV 296
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS--MPGHAEAVISVKFSPNG 219
+ ++ L + T + + + AV+ + T T + GH AV V F +
Sbjct: 297 LHLRFSNGLMV-TCSKDRSI-------AVWDMASPTDITLRRVLVGHRAAVNVVDF--DD 346
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + S SGD T++ W +T + GHK + C+ + + +VSG + I WD
Sbjct: 347 KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 404
Query: 280 TG 281
G
Sbjct: 405 CG 406
Score = 144 (55.7 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 371 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 426
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 427 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDT 486
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 487 ILIWDFL 493
Score = 52 (23.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 125 LASGSGDTTVRFWDVTTQTPLFKCEGTP----YLFYVNETEITKTLADVLPLDTLNTEEV 180
+ SG D +++ WD T+ L G L Y +T + + + +NT EV
Sbjct: 226 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEV 285
Query: 181 VD-IVYQKQAVFQVR 194
++ +++ +AV +R
Sbjct: 286 LNTLIHHNEAVLHLR 300
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 199 (75.1 bits), Expect = 6.5e-20, Sum P(2) = 6.5e-20
Identities = 48/151 (31%), Positives = 82/151 (54%)
Query: 424 AQCPEGEKLVSGSDDFTLFLWN-PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK 482
A P + L +GS D T LW P+ + L +GH++ + V+FSP +++A+AS D
Sbjct: 486 AVSPNDKLLATGSQDRTAKLWALPQCQL--LGVFSGHRRGLWNVQFSPTDQVLATASADG 543
Query: 483 SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG 542
+IKLW + + T GH +V VA+ S L+S +D LK+W +K+ + + L
Sbjct: 544 TIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSNECVRTLDA 603
Query: 543 HGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
H D+V+ + + + +GG D + LW++
Sbjct: 604 HEDKVWGLHCSRLDDHAITGGSDSRIILWKD 634
Score = 170 (64.9 bits), Expect = 9.9e-17, Sum P(2) = 9.9e-17
Identities = 46/154 (29%), Positives = 77/154 (50%)
Query: 432 LVSGSDDFTLFLWN-----PEKEKKS-------LARMTG--HQQLINCVEFSPDGRIIAS 477
LV+GS D T+ LW P K S A+ T H + IN + SP+ +++A+
Sbjct: 437 LVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRCHDKDINSLAVSPNDKLLAT 496
Query: 478 ASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE 537
S D++ KLW + + GH + ++ V +S ++L + SAD T+K+W ++
Sbjct: 497 GSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLATASADGTIKLWALQDFSCL 556
Query: 538 QDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ GH V V + G ++ S G D +L+LW
Sbjct: 557 KTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLW 590
Score = 150 (57.9 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 60/285 (21%), Positives = 120/285 (42%)
Query: 93 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EG 150
VF+++ + C + GH + V+++ G AS + D ++R W + + C +G
Sbjct: 361 VFELQTLA-C-QILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWRMNKAGQV-ACVAQG 417
Query: 151 TPYLFYVNETEITKTLADVLPLD----TLNTEEVVDIVYQKQAVFQ--VRPVTRCTSSMP 204
+ + V ++ L T+ + + + K + P+ + S+
Sbjct: 418 SGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPL-QAQSTQR 476
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
H + + S+ SPN + LA+GS D T + W + L GH+ + + +SP + L
Sbjct: 477 CHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVL 536
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
+ +G I W + + GH + +++ + + SSG DG +++W
Sbjct: 537 ATASADGTIKLWALQDFSCL-KTFEGHDASVLKVAFVS-----RGAQLLSSGSDGLLKLW 590
Query: 325 DVILSQCVRVLTSHTRSVT---CIRWGGSGLIYSASQDRTIKVWR 366
+ ++CVR L +H V C R + + D I +W+
Sbjct: 591 TIKSNECVRTLDAHEDKVWGLHCSRLDDHAI--TGGSDSRIILWK 633
Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 41/151 (27%), Positives = 78/151 (51%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG--HQQLINCVEFSPDGRIIASASFDKSI 484
P+ E LV+ S L W + ++AR+ H + + F ++A+ D ++
Sbjct: 76 PDDEVLVTASRALLLAQW--AWREGTVARLWKAIHTAPVASMAFDATSTLLATGGCDGAV 133
Query: 485 KLWDGRIGKFITT--LRGHVQAVYMVAWSSD-SRLLVSGSA-DSTLKVWNMKTKKIEQDL 540
++WD I + T RG V++VA+ D +RLL+ SA D++++VW+++ + L
Sbjct: 134 RVWD--IVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSCLAVL 191
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
H V ++ ++ DG + S G+DK+ +W
Sbjct: 192 TAHYSAVTSLSFSEDGHTMLSSGRDKICIVW 222
Score = 143 (55.4 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 54/230 (23%), Positives = 97/230 (42%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRS-LASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
C + GH +V ++ S S L +GS D TV+ W + P L + +
Sbjct: 413 CVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPL-QA 471
Query: 161 EITKTL--ADVLPLDTLNTEEVVDIVYQ-KQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
+ T+ D+ L ++++ Q + A P + GH + +V+FSP
Sbjct: 472 QSTQRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSP 531
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+ LA+ S D T++ W + + L EGH VL +A+ QL+S +G++ W
Sbjct: 532 TDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWT 591
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW-DV 326
+ + + + + H+ + L H + + G D I +W DV
Sbjct: 592 IKSNECV-RTLDAHEDKVWGL-----HCSRLDDHAITGGSDSRIILWKDV 635
Score = 130 (50.8 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 64/300 (21%), Positives = 121/300 (40%)
Query: 190 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC---- 245
VF+++ + C + GH + V+++ G AS + D ++R W + + C
Sbjct: 361 VFELQTLA-C-QILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWRMNKAGQV-ACVAQG 417
Query: 246 EGHKHWV--LCIAWSPDSKQLVSGCKNGVIHAWD----------SSTGK----QIGQPMR 289
GH H V +C + +S LV+G ++ + W +S G Q R
Sbjct: 418 SGHTHSVGTICCSRLKESF-LVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQR 476
Query: 290 GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG 349
H + I +L+ P N + A+ +D ++W + Q + V + H R + +++
Sbjct: 477 CHDKDINSLAVSP---NDKL--LATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSP 531
Query: 350 SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408
+ ++ +AS D TIK+W D +T EGH V +A + + + S G K
Sbjct: 532 TDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWT 591
Query: 409 ANPEESSK----HALAKYQAQCPE-GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
E + H + C + ++G D + LW E + ++ +
Sbjct: 592 IKSNECVRTLDAHEDKVWGLHCSRLDDHAITGGSDSRIILWKDVTEAEQAEEQAKREEQV 651
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 76/306 (24%), Positives = 124/306 (40%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H V S+ F LA+G D VR WD+ G V +A+ PD +L+
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLL 167
Query: 266 --SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRI 323
S + I W S + + H +T+LS+ + SSG+D +
Sbjct: 168 LFSSAVDTSIRVW-SLQDRSCLAVLTAHYSAVTSLSF-----SEDGHTMLSSGRDKICIV 221
Query: 324 WDVI---LSQCVRVLTSHTRSVT-----CIRWG--GSGLIYSASQDRTI-KVWRASDGVM 372
WD+ S+ V V S SV + G SGL + + D+ I +VW A+ G
Sbjct: 222 WDLRSYETSRTVPVFESVEASVLLPEEPALALGVKNSGLHFLTAGDQGILRVWEAASGQC 281
Query: 373 CRT---LEGHAHWVN--TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP 427
T + G + TLA + L+ V A Y+ A + K A Y +
Sbjct: 282 VYTQPQMSGLRQELTHCTLARAAGLLLTVTADHNL-LLYE-ARSLQLQKQ-FAGYSEEVL 338
Query: 428 EGEKLVSGSDDFTLFLWNPE--K--EKKSLAR--MTGHQQLINCVEFSPDGRIIASASFD 481
+ + + +D + N K E ++LA + GH ++ ++ G + AS + D
Sbjct: 339 D-VRFLGPNDSHIIVASNSPCLKVFELQTLACQILHGHTDIVLALDVFRKGWLFASCAKD 397
Query: 482 KSIKLW 487
+SI++W
Sbjct: 398 QSIRIW 403
Score = 121 (47.7 bits), Expect = 6.5e-20, Sum P(2) = 6.5e-20
Identities = 71/298 (23%), Positives = 118/298 (39%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H V S+ F LA+G D VR WD+ G+P + + + D
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVH-----LVAFHPD 162
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
P L VD + ++ Q R C + + H AV S+ FS +G ++ S D
Sbjct: 163 --PTRLLLFSSAVDTSIRVWSL-QDRS---CLAVLTAHYSAVTSLSFSEDGHTMLSSGRD 216
Query: 229 TTVRFWDV----TTQT-PLFKCEGHKHWVLCIAWSPDSKQLVSGCKN-----------GV 272
WD+ T++T P+F E + VL P+ L G KN G+
Sbjct: 217 KICIVWDLRSYETSRTVPVF--ESVEASVLL----PEEPALALGVKNSGLHFLTAGDQGI 270
Query: 273 IHAWDSSTGKQI-GQP-MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ 330
+ W++++G+ + QP M G +Q +T + L + D + +++ Q
Sbjct: 271 LRVWEAASGQCVYTQPQMSGLRQELTHCT-----LARAAGLLLTVTADHNLLLYEARSLQ 325
Query: 331 CVRVLTSHTRSVTCIRWGG--SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTL 386
+ ++ V +R+ G I AS +KV+ + C+ L GH V L
Sbjct: 326 LQKQFAGYSEEVLDVRFLGPNDSHIIVASNSPCLKVFELQT-LACQILHGHTDIVLAL 382
Score = 118 (46.6 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 64/301 (21%), Positives = 118/301 (39%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C + + H AV S+ FS +G ++ S D WD+ + ++ T +F E
Sbjct: 187 CLAVLTAHYSAVTSLSFSEDGHTMLSSGRDKICIVWDLRS----YETSRTVPVFESVEAS 242
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT--RCTSSMP---GHAEAVISVKFS 216
+ L L N+ + + Q + +V +C + P G + + +
Sbjct: 243 VLLPEEPALALGVKNSG-LHFLTAGDQGILRVWEAASGQCVYTQPQMSGLRQELTHCTLA 301
Query: 217 PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW-SPDSKQLVSGCKNGVIHA 275
L + + D + ++ + + G+ VL + + P+ ++ + +
Sbjct: 302 RAAGLLLTVTADHNLLLYEARSLQLQKQFAGYSEEVLDVRFLGPNDSHIIVASNSPCLKV 361
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS---QCV 332
++ T Q + GH + AL + F FAS KD +IRIW + + CV
Sbjct: 362 FELQT--LACQILHGHTDIVLAL--DVFRKGWL---FASCAKDQSIRIWRMNKAGQVACV 414
Query: 333 RVLTSHTRSV---TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
+ HT SV C R S L+ + SQD T+K+W + + + + A S
Sbjct: 415 AQGSGHTHSVGTICCSRLKESFLV-TGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQS 473
Query: 390 T 390
T
Sbjct: 474 T 474
Score = 98 (39.6 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 31/121 (25%), Positives = 52/121 (42%)
Query: 415 SKHALAKYQAQ-CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR 473
S H + Q P + L + S D T+ LW + + L GH + V F G
Sbjct: 518 SGHRRGLWNVQFSPTDQVLATASADGTIKLWALQ-DFSCLKTFEGHDASVLKVAFVSRGA 576
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
+ S+ D +KLW + + + TL H V+ + S ++G +DS + +W T
Sbjct: 577 QLLSSGSDGLLKLWTIKSNECVRTLDAHEDKVWGLHCSRLDDHAITGGSDSRIILWKDVT 636
Query: 534 K 534
+
Sbjct: 637 E 637
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 244 (91.0 bits), Expect = 7.5e-20, P = 7.5e-20
Identities = 67/247 (27%), Positives = 122/247 (49%)
Query: 337 SHTRSVTCIRWG-----GSGLIYSASQDRTIKVWRASDG--VMCRTLEGHAHWVNTLALS 389
+H ++ + WG GS L+ S S D +KVW+ SD M LEGH V ++ +S
Sbjct: 14 AHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVS 73
Query: 390 TDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQAQC----PEGEKLVSGSDDFTLFLW 444
+ ++ + +D + ++ A P+ + L +GS + ++
Sbjct: 74 PSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIF 133
Query: 445 NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
E KK + T + +++ + +SPDG+ +AS + D I ++D GK + TL GH
Sbjct: 134 GVETGKKEYSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMP 192
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK 564
+ + +S+DS+LLV+ S D +K+++++ + L GHG V V ++PD S
Sbjct: 193 IRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSS 252
Query: 565 DKVLRLW 571
DK +++W
Sbjct: 253 DKSVKVW 259
Score = 226 (84.6 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 74/290 (25%), Positives = 129/290 (44%)
Query: 291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW---DVILSQCVRVLTSHTRSVTCIRW 347
H+ I ++ W + N S D +++W D L + L H V +
Sbjct: 15 HEDAIWSVGWGK-NSNDGSELVISGSLDDLVKVWKWSDERL-EMQWALEGHQLGVVSVDV 72
Query: 348 GGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG--- 403
SG ++ S+S D I++W G R+++ ++A S D + G
Sbjct: 73 SPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNI 132
Query: 404 FKYDPANPEES--SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
F + E S ++ A P+G+ L SG+ D + +++ K L + GH
Sbjct: 133 FGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL-LHTLEGHAM 191
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
I + FS D +++ +AS D IK++D + TL GH V VA+S D VS S
Sbjct: 192 PIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSS 251
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+D ++KVW++ + H D+V+ V + +G K+ S G D+ + ++
Sbjct: 252 SDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVY 301
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 76/276 (27%), Positives = 123/276 (44%)
Query: 109 HAEAVISV---KFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
H +A+ SV K S +G L SGS D V+ W + E + + ++
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWK-------WSDERLEMQWALEGHQLGV 67
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
DV P + +D + ++ + + S G +A SV FSP+ + LA+
Sbjct: 68 VSVDVSPSGNIMASSSLDAHIR---LWDLESGKQIRSIDAGPVDAW-SVAFSPDSQHLAT 123
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
GS V + V T + + ++L IA+SPD K L SG +G+I+ +D +TGK +
Sbjct: 124 GSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL 183
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
+ GH I +L+ F + Q AS DG I+I+DV + L+ H V
Sbjct: 184 -HTLEGHAMPIRSLT---FSTDSQLLVTASD--DGYIKIYDVQHASLAATLSGHGSWVLN 237
Query: 345 IRWGGSGLIY-SASQDRTIKVWRASDGVMCRTLEGH 379
+ + + S+S D+++KVW S T H
Sbjct: 238 VAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDH 273
Score = 173 (66.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 52/198 (26%), Positives = 93/198 (46%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH V+SV SP+G +AS S D +R WD+ + + + P V+ +
Sbjct: 59 ALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGP----VDAWSVAF 114
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
+ D L T + V+I F V + S+ + ++S+ +SP+G+ LAS
Sbjct: 115 S-PDSQHLATGSHVGKVNI-------FGVETGKK-EYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
G+ D + +D+ T L EGH + + +S DS+ LV+ +G I +D +
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHAS-L 224
Query: 285 GQPMRGHKQWITALSWEP 302
+ GH W+ +++ P
Sbjct: 225 AATLSGHGSWVLNVAFSP 242
Score = 167 (63.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 68/306 (22%), Positives = 131/306 (42%)
Query: 237 TTQTPLFKCE-GHKHWVLCIAW---SPDSKQLV-SGCKNGVIHAWDSSTGK-QIGQPMRG 290
T + LFK E H+ + + W S D +LV SG + ++ W S + ++ + G
Sbjct: 3 TQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEG 62
Query: 291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-G 349
H+ + ++ P ASS D IR+WD+ + +R + + + +
Sbjct: 63 HQLGVVSVDVSP-----SGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPD 117
Query: 350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDP 408
S + + S + ++ G +L+ ++ ++A S D G +D
Sbjct: 118 SQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 409 ANPE---ESSKHALA-KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN 464
A + HA+ + + + LV+ SDD + +++ + + A ++GH +
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLA-ATLSGHGSWVL 236
Query: 465 CVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524
V FSPD S+S DKS+K+WD + T H V+ V ++ + +VS D
Sbjct: 237 NVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQ 296
Query: 525 TLKVWN 530
+ V++
Sbjct: 297 EIHVYD 302
Score = 144 (55.7 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 44/173 (25%), Positives = 84/173 (48%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S+ + ++S+ +SP+G+ LASG+ D + +D+ T L EG + + +
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--HAMPIRSLTFS- 199
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
D L T + D Y K ++ V+ + +++ GH V++V FSP+ S
Sbjct: 200 --TDSQLLVTAS-----DDGYIK--IYDVQHAS-LAATLSGHGSWVLNVAFSPDDAHFVS 249
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
S D +V+ WDV+ +T + H+ V + ++ + ++VS + IH +D
Sbjct: 250 SSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 210 (79.0 bits), Expect = 7.6e-20, Sum P(2) = 7.6e-20
Identities = 56/184 (30%), Positives = 93/184 (50%)
Query: 203 MPGHAEAVISVKFSP-----NGRS--LASGSGDTTVRFWDVTTQTPLFKC-----EGHKH 250
+ GH + V SV ++P +G S LAS SGD TVR W+ ++ + + C E H
Sbjct: 16 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 75
Query: 251 WVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK-QIGQPMRGHKQWITALSWEPFHLNHQC 309
V AWSP + L + +G W + + + + GH+ + ++SW + + C
Sbjct: 76 TVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSW---NASGSC 132
Query: 310 RRFASSGKDGAIRIWDVILSQ---CVRVLTSHTRSVTCIRWGGS-GLIYSASQDRTIKVW 365
A+ +D ++ IW+V+ C VLT HT+ V ++W + +++S S D TIKVW
Sbjct: 133 --LATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
Query: 366 RASD 369
+ D
Sbjct: 191 WSED 194
Score = 185 (70.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 60/228 (26%), Positives = 101/228 (44%)
Query: 358 QDRTIKVWRASDGVMCRTLEGHAHWVNTL--ALSTDYLMRVEATSTGGFKYDPANPEESS 415
+ T +VW V + HA V+ + + S D +R+ S+ + E +
Sbjct: 17 EGHTDRVW----SVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET 72
Query: 416 KHALAKYQAQCPEGEKLVSGSDDFTLFLW-NPEKEKKSLARMTGHQQLINCVEFSPDGRI 474
+ A P G+ L + S D T +W N E + ++ + GH+ + V ++ G
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSC 132
Query: 475 IASASFDKSIKLWD---GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
+A+ S DKS+ +W+ G L GH Q V MV W +L S S D+T+KVW
Sbjct: 133 LATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWS 192
Query: 532 KTKKIE----QDLP----GHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ E Q L GH V+++ + G+K+ + D L++W
Sbjct: 193 EDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW 240
Score = 150 (57.9 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 45/165 (27%), Positives = 82/165 (49%)
Query: 429 GEKLVSGSDDFTLFLWN--PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
G L + S D ++++W E A +TGH Q + V++ P ++ S S+D +IK+
Sbjct: 130 GSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKV 189
Query: 487 W--DGRIGKF--ITTL----RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ 538
W + G++ + TL GH V+ +++++ +V+ S D TLK+W K++
Sbjct: 190 WWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQS 249
Query: 539 D-----------LPGHGDE-VYAVDWAPDGEKVASGGKDKVLRLW 571
L G+ D +Y+ W+ D + +ASG D +RL+
Sbjct: 250 GEEYAPWIHLCTLSGYHDRTIYSAHWSRD-DIIASGAGDNAIRLF 293
Score = 143 (55.4 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 40/138 (28%), Positives = 65/138 (47%)
Query: 449 EKKSLARMTGHQQLINCVEFSP-----DG--RIIASASFDKSIKLWD----GRIGKFITT 497
E + ++ GH + V ++P DG I+AS S D ++++W+ R T
Sbjct: 9 ELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTV 68
Query: 498 LRG-HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE--QDLPGHGDEVYAVDWAP 554
L H + V AWS +LL + S D T +W + E L GH +EV +V W
Sbjct: 69 LEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNA 128
Query: 555 DGEKVASGGKDKVLRLWQ 572
G +A+ +DK + +W+
Sbjct: 129 SGSCLATCSRDKSVWIWE 146
Score = 135 (52.6 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 62/243 (25%), Positives = 103/243 (42%)
Query: 106 MPGHAEAVISVKFSP-----NGRS--LASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVN 158
+ GH + V SV ++P +G S LAS SGD TVR W+ ++ + + C+ +
Sbjct: 16 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTV-----LE 70
Query: 159 ETEITKTLADVL--P----LDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVIS 212
ET T+T+ P L T + + I + F+ C S++ GH V S
Sbjct: 71 ETH-TRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFE------CISTLEGHENEVKS 123
Query: 213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE----GHKHWVLCIAWSPDSKQLVSGC 268
V ++ +G LA+ S D +V W+V + C GH V + W P L S
Sbjct: 124 VSWNASGSCLATCSRDKSVWIWEVLEGNE-YDCAAVLTGHTQDVKMVQWHPTMDVLFSCS 182
Query: 269 KNGVIHAW--DSSTGKQ-----IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+ I W + G+ +G+ GH + ++S+ N + + D +
Sbjct: 183 YDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISF-----NAAGDKMVTCSDDLTL 237
Query: 322 RIW 324
+IW
Sbjct: 238 KIW 240
Score = 128 (50.1 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 37/112 (33%), Positives = 57/112 (50%)
Query: 286 QPMRGHKQWITALSWEPF--HLNHQCRRFASSGKDGAIRIWDVI-LSQ---CVRVLT-SH 338
Q + GH + +++W P H + AS D +RIW+ LS+ C VL +H
Sbjct: 14 QKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETH 73
Query: 339 TRSVTCIRWGGSG-LIYSASQDRTIKVWR--ASDGVMCRTLEGHAHWVNTLA 387
TR+V W SG L+ +AS D T +W+ S+ TLEGH + V +++
Sbjct: 74 TRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVS 125
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 56/245 (22%), Positives = 100/245 (40%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG--TPYLFYVNE 159
C S++ GH V SV ++ +G LA+ S D +V W+V + C T + V
Sbjct: 110 CISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNE-YDCAAVLTGHTQDVKM 168
Query: 160 TEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNG 219
+ T+ DVL + + + + + + + + + V S GH+ V S+ F+ G
Sbjct: 169 VQWHPTM-DVL--FSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAG 225
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV-LCIA------------WSPDSKQLVS 266
+ + S D T++ W T + E + W+ LC WS D + S
Sbjct: 226 DKMVTCSDDLTLKIWG-TDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRDDI-IAS 283
Query: 267 GCKNGVIHAW-----DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
G + I + DS G ++ +K ++ + R AS+ DG +
Sbjct: 284 GAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMV 343
Query: 322 RIWDV 326
+IW +
Sbjct: 344 KIWQL 348
Score = 117 (46.2 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 38/155 (24%), Positives = 66/155 (42%)
Query: 244 KCEGHKHWVLCIAWSPDSKQ------LVSGCK-NGVIHAWDSS------TGKQIGQPMRG 290
K EGH V +AW+P S +++ C + + W+ S T K + +
Sbjct: 15 KLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET-- 72
Query: 291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ--CVRVLTSHTRSVTCIRWG 348
H + + + +W P + A++ DG IW S+ C+ L H V + W
Sbjct: 73 HTRTVRSCAWSP-----SGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWN 127
Query: 349 GSG-LIYSASQDRTIKVWRASDG--VMCRT-LEGH 379
SG + + S+D+++ +W +G C L GH
Sbjct: 128 ASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGH 162
Score = 92 (37.4 bits), Expect = 7.6e-20, Sum P(2) = 7.6e-20
Identities = 25/91 (27%), Positives = 49/91 (53%)
Query: 495 ITTLRG-HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG----------H 543
+ TL G H + +Y WS D ++ SG+ D+ ++++ + +K D P H
Sbjct: 259 LCTLSGYHDRTIYSAHWSRDD-IIASGAGDNAIRLF-VDSKHDSVDGPSYNLLLKKNKAH 316
Query: 544 GDEVYAVDWAP-DGEKV-ASGGKDKVLRLWQ 572
++V +V W+P +G ++ AS D ++++WQ
Sbjct: 317 ENDVNSVQWSPGEGNRLLASASDDGMVKIWQ 347
Score = 85 (35.0 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 31/94 (32%), Positives = 44/94 (46%)
Query: 453 LARMTG-HQQLINCVEFSPDGRIIASASFDKSIKLW-----DGRIGKFITTL----RGHV 502
L ++G H + I +S D IIAS + D +I+L+ D G L + H
Sbjct: 259 LCTLSGYHDRTIYSAHWSRDD-IIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHE 317
Query: 503 QAVYMVAWS--SDSRLLVSGSADSTLKVWNMKTK 534
V V WS +RLL S S D +K+W + TK
Sbjct: 318 NDVNSVQWSPGEGNRLLASASDDGMVKIWQLATK 351
Score = 60 (26.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 337 SHTRSVTCIRWG-GSG--LIYSASQDRTIKVWR 366
+H V ++W G G L+ SAS D +K+W+
Sbjct: 315 AHENDVNSVQWSPGEGNRLLASASDDGMVKIWQ 347
>POMBASE|SPAC25H1.08c [details] [associations]
symbol:SPAC25H1.08c "ribosome biogenesis protein Sqt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.08c GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 HOGENOM:HOG000261676 GO:GO:0000027 HSSP:Q04724
KO:K14818 OrthoDB:EOG45TGWZ PIR:T38388 RefSeq:NP_593812.1
ProteinModelPortal:O13982 STRING:O13982 PRIDE:O13982
EnsemblFungi:SPAC25H1.08c.1 GeneID:2542715 KEGG:spo:SPAC25H1.08c
OMA:PICACAS NextBio:20803763 Uniprot:O13982
Length = 399
Score = 259 (96.2 bits), Expect = 8.2e-20, P = 8.2e-20
Identities = 96/349 (27%), Positives = 155/349 (44%)
Query: 206 HAEAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
H ++V SV +P +L ASG GD WD+TT + + GHK ++ I WS D +
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYI 119
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG-KDGAIRI 323
+G + + W SSTG + + I LSW P L F ++G DG+I +
Sbjct: 120 ATGGMDSQVRLWKSSTGFEFITAFETVDE-IVWLSWHPKGL------FLAAGCNDGSIWM 172
Query: 324 WDVILSQCVRVLTSHTRSVTCIRWGGSGL---IYSASQDRTIKVWRASDGVM-CRTLEGH 379
W + + V+V+ HT V ++ G+ + + T+ VW + G CR +
Sbjct: 173 WSLPSGKVVQVMYGHTAPVNAGKFIPPGVGKRLATVDDSGTLIVWNPATGAPECR-MSSD 231
Query: 380 AHWVN-----TLALSTDYLMRVEATST--GGFKYDPANPEESSKHALAKYQAQCPEGEKL 432
H + T A T + E GG +S H LA +AQ E +
Sbjct: 232 DHRFDPGNEETAAGWTSFDCNAEGNVLFLGGSSGKVKVVNINSSHILASLEAQTESVEAI 291
Query: 433 V---------SGSDDFTLFLWNPE--KEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
S D T+ L++ K +KSL Q +I+C +F P+ + +A D
Sbjct: 292 ALCTALPICACASVDGTVALYDSASLKFRKSLPH---EQAVIDC-KFLPNTPYLLTACAD 347
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
I+ WD R G+ + GH + + +A + D + +V+GS D+ L V++
Sbjct: 348 CVIRKWDVRSGQLLGEYTGHQEPILCMAITPDGKRVVTGSDDTELLVFD 396
Score = 203 (76.5 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 69/302 (22%), Positives = 128/302 (42%)
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
+ GH ++++++ +S +G +A+G D+ VR W +T ++ ++W P
Sbjct: 100 LTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTGFEFITAFETVDEIVWLSWHPKGL 159
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
L +GC +G I W +GK + Q M GH + A + P + +R A+ G +
Sbjct: 160 FLAAGCNDGSIWMWSLPSGKVV-QVMYGHTAPVNAGKFIPPGVG---KRLATVDDSGTLI 215
Query: 323 IWDVILS--QCVRVLTSHT----RSVTCIRW-----GGSG-LIYSASQDRTIKVWRASDG 370
+W+ +C H T W G +++ +KV +
Sbjct: 216 VWNPATGAPECRMSSDDHRFDPGNEETAAGWTSFDCNAEGNVLFLGGSSGKVKVVNINSS 275
Query: 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE--ESSKHALAKYQAQ-C 426
+ +LE V +AL T + A+ G YD A+ + +S H A +
Sbjct: 276 HILASLEAQTESVEAIALCTALPICACASVDGTVALYDSASLKFRKSLPHEQAVIDCKFL 335
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P L++ D + W+ + + L TGHQ+ I C+ +PDG+ + + S D + +
Sbjct: 336 PNTPYLLTACADCVIRKWDV-RSGQLLGEYTGHQEPILCMAITPDGKRVVTGSDDTELLV 394
Query: 487 WD 488
+D
Sbjct: 395 FD 396
Score = 157 (60.3 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 37/140 (26%), Positives = 71/140 (50%)
Query: 435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG-K 493
G DD ++W+ ++ + ++TGH+ I +++S DG IA+ D ++LW G +
Sbjct: 81 GGDDLG-YIWDITTGEQ-ICQLTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTGFE 138
Query: 494 FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA 553
FIT V + ++W L +G D ++ +W++ + K+ Q + GH V A +
Sbjct: 139 FITAFET-VDEIVWLSWHPKGLFLAAGCNDGSIWMWSLPSGKVVQVMYGHTAPVNAGKFI 197
Query: 554 PDG--EKVASGGKDKVLRLW 571
P G +++A+ L +W
Sbjct: 198 PPGVGKRLATVDDSGTLIVW 217
Score = 130 (50.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 501 HVQAVYMVAWSS-DSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV 559
H +V+ V+ + S L SG D +W++ T + L GH D + A+DW+ DG +
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYI 119
Query: 560 ASGGKDKVLRLWQN 573
A+GG D +RLW++
Sbjct: 120 ATGGMDSQVRLWKS 133
Score = 129 (50.5 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
S+P H +AVI KF PN L + D +R WDV + L + GH+ +LC+A +PD
Sbjct: 322 SLP-HEQAVIDCKFLPNTPYLLTACADCVIRKWDVRSGQLLGEYTGHQEPILCMAITPDG 380
Query: 262 KQLVSGCKNGVIHAWD 277
K++V+G + + +D
Sbjct: 381 KRVVTGSDDTELLVFD 396
Score = 127 (49.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 39/169 (23%), Positives = 75/169 (44%)
Query: 400 STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
S+ ++DP N E ++ + EG L G + + N LA +
Sbjct: 229 SSDDHRFDPGNEETAA--GWTSFDCNA-EGNVLFLGGSSGKVKVVNINSSH-ILASLEAQ 284
Query: 460 QQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVS 519
+ + + I A AS D ++ L+D KF +L H QAV + ++ L++
Sbjct: 285 TESVEAIALCTALPICACASVDGTVALYDSASLKFRKSLP-HEQAVIDCKFLPNTPYLLT 343
Query: 520 GSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
AD ++ W++++ ++ + GH + + + PDG++V +G D L
Sbjct: 344 ACADCVIRKWDVRSGQLLGEYTGHQEPILCMAITPDGKRVVTGSDDTEL 392
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 30/114 (26%), Positives = 50/114 (43%)
Query: 459 HQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLL 517
H+ + V +P + AS D +WD G+ I L GH ++ + WS D +
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYI 119
Query: 518 VSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+G DS +++W T DE+ + W P G +A+G D + +W
Sbjct: 120 ATGGMDSQVRLWKSSTGFEFITAFETVDEIVWLSWHPKGLFLAAGCNDGSIWMW 173
Score = 116 (45.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 54/253 (21%), Positives = 109/253 (43%)
Query: 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS--KQLV 265
+ ++ + + P G LA+G D ++ W + + + GH V + P K+L
Sbjct: 147 DEIVWLSWHPKGLFLAAGCNDGSIWMWSLPSGKVVQVMYGHTAPVNAGKFIPPGVGKRLA 206
Query: 266 SGCKNGVIHAWDSSTGK-QIGQPMRGHK----QWITALSWEPFHLNHQCRRFASSGKDGA 320
+ +G + W+ +TG + H+ TA W F N + G G
Sbjct: 207 TVDDSGTLIVWNPATGAPECRMSSDDHRFDPGNEETAAGWTSFDCNAEGNVLFLGGSSGK 266
Query: 321 IRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYS-ASQDRTIKVWRASDGVMCRTLEGH 379
+++ ++ S + L + T SV I + I + AS D T+ ++ ++ ++L
Sbjct: 267 VKVVNINSSHILASLEAQTESVEAIALCTALPICACASVDGTVALYDSASLKFRKSLPHE 326
Query: 380 AHWVNTLAL-STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC----PEGEKLVS 434
++ L +T YL+ A K+D + + ++ + C P+G+++V+
Sbjct: 327 QAVIDCKFLPNTPYLLTACADCVIR-KWDVRSGQLLGEYTGHQEPILCMAITPDGKRVVT 385
Query: 435 GSDDFTLFLWNPE 447
GSDD L +++ E
Sbjct: 386 GSDDTELLVFDCE 398
Score = 70 (29.7 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 109 HAEAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEG 150
H ++V SV +P +L ASG GD WD+TT + + G
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTG 102
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 254 (94.5 bits), Expect = 8.6e-20, P = 8.6e-20
Identities = 89/325 (27%), Positives = 143/325 (44%)
Query: 189 AVFQVRPVTRCTSS------MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 242
A+ Q P RC+S + GH V KF PNG +LAS D + W V
Sbjct: 44 ALLQTGP-PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDN 102
Query: 243 FKC-EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWE 301
+ +GH V+ + ++ D L S + + WDS TG+++ + ++GH ++ S
Sbjct: 103 YATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--SCY 159
Query: 302 PFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDR 360
P Q + DG +++WD+ ++ +T V + + S I S D
Sbjct: 160 PARRGPQL--VCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDN 216
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTD--YLMRVEATSTGG-FKYDPANPEE---- 413
IKVW + T+ GHA V L+LS++ YL+ +T + P P+E
Sbjct: 217 DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVK 276
Query: 414 ---SSKHALAKYQAQC---PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE 467
+ H K +C P+G K+ +GS D L+ W+ +SL ++ H+
Sbjct: 277 IFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWH-SLSVRSLGQIPRHRLSRQEDS 335
Query: 468 FSP-DGRIIASASFDKSIKLWDGRI 491
P +G I SAS DK +L+ G I
Sbjct: 336 VKPQEGIXILSASSDK--RLYMGEI 358
Score = 240 (89.5 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 76/258 (29%), Positives = 123/258 (47%)
Query: 332 VRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRA-SDGVMCRTLEGHAHWVNTLALS 389
+ +L+ H V C ++ +G + SA DR I +W D TL+GH+ V L +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYN 119
Query: 390 TDYLMRVEATSTGGFK-YDPANPEESSK-HALAKYQAQC-P--EGEKLV-SGSDDFTLFL 443
TD M A++ +D E + + C P G +LV +GSDD T+ L
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ K K ++ Q++ V F+ I S D IK+WD R K T+RGH
Sbjct: 180 WDIRK-KAAIQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKT----KKIEQDLPG--HGDE--VYAVDWAPD 555
+V ++ SS+ L+S + D+T++VW+++ ++ + G H E + W+PD
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 297
Query: 556 GEKVASGGKDKVLRLWQN 573
G K+A+G D L W +
Sbjct: 298 GSKIAAGSADSFLYPWHS 315
Score = 194 (73.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 69/284 (24%), Positives = 123/284 (43%)
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQC--VRVLTSHTRSVTCIRWGGSG-LIYSASQD 359
FH N AS+G D I +W V C L H+ +V + + G +++SAS D
Sbjct: 75 FHPNGST--LASAGFDRLILLWSVY-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTD 131
Query: 360 RTIKVWRASDGVMCRTLEGHAHWVNTL--ALSTDYLMRVEATSTGGFKYDPANPEESSKH 417
+T+ VW + G + L+GH +VN+ A L+ + G K + + +
Sbjct: 132 KTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV-CTGSDDGTVKLWDIRKKAAIQT 190
Query: 418 ALAKYQAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR 473
YQ ++++SG D + +W+ + K + M GH + + S +G
Sbjct: 191 FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGS 249
Query: 474 IIASASFDKSIKLWDGRI----GKFITTLRGHV----QAVYMVAWSSDSRLLVSGSADST 525
+ S + D ++++WD R + + +G+V + + +WS D + +GSADS
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSF 309
Query: 526 LKVWNMKTKKIEQDLPGHGDEVYAVDWAP-DGEKVASGGKDKVL 568
L W+ + + +P H P +G + S DK L
Sbjct: 310 LYPWHSLSVRSLGQIPRHRLSRQEDSVKPQEGIXILSASSDKRL 353
Score = 160 (61.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 53/196 (27%), Positives = 88/196 (44%)
Query: 106 MPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
+ GH V S + G L +GS D TV+ WD+ + + + T + V
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNT---YQVLAVTFND 204
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
T ++ N +V D+ +Q + T +M GHA++V + S G L S
Sbjct: 205 TSDQIISGGIDNDIKVWDL---RQ--------NKLTYTMRGHADSVTGLSLSSEGSYLLS 253
Query: 225 GSGDTTVRFWDVTTQTPLFKC----EGHKHW----VLCIAWSPDSKQLVSGCKNGVIHAW 276
+ D TVR WDV P +C +G+ H +L +WSPD ++ +G + ++ W
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPW 313
Query: 277 DSSTGKQIGQPMRGHK 292
S + + +GQ R H+
Sbjct: 314 HSLSVRSLGQIPR-HR 328
Score = 143 (55.4 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 59/218 (27%), Positives = 92/218 (42%)
Query: 92 AVFQVRPVTRCTSS------MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 145
A+ Q P RC+S + GH V KF PNG +LAS D + W V
Sbjct: 44 ALLQTGP-PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGD--- 99
Query: 146 FKCEGTPYLFYVNETEITKTL---ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS 202
C+ Y + L D L + +T++ V V+ + +V+
Sbjct: 100 --CDN--YATLKGHSGAVMELHYNTDGSMLFSASTDKTV-AVWDSETGERVK-------R 147
Query: 203 MPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
+ GH V S + G L +GS D TV+ WD+ + + + + + VL + ++ S
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTS 206
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALS 299
Q++SG + I WD K + MRGH +T LS
Sbjct: 207 DQIISGGIDNDIKVWDLRQNK-LTYTMRGHADSVTGLS 243
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 40/175 (22%), Positives = 77/175 (44%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
+++ GH+ AV+ + ++ +G L S S D TV WD T + + +G + +VN
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG--HTSFVNSCYPA 161
Query: 164 KTLADVLPLDTLN-TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL 222
+ ++ + + T ++ DI +K+A Q T V++V F+ +
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDI--RKKAAIQTFQNTY----------QVLAVTFNDTSDQI 209
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
SG D ++ WD+ + GH V ++ S + L+S + + WD
Sbjct: 210 ISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 262 (97.3 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 64/233 (27%), Positives = 121/233 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + + S +D +I+IWD +C+++LT HT SV C+++ +I + S D T++V
Sbjct: 231 LQYDDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYD-ERVIVTGSSDSTVRV 289
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G + TL H V L ++ + +D A+P + S + L ++
Sbjct: 290 WDVNSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAV-WDMASPTDISLRRVLVGHR 348
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +W+ + + + GH++ I C+++ R++ S S
Sbjct: 349 AAVNVVDFDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 405
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW+++
Sbjct: 406 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 456
Score = 232 (86.7 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 81/299 (27%), Positives = 139/299 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D ++++SG ++ I WD T + + + + GH + L ++ R
Sbjct: 228 VYCLQY--DDEKIISGLRDNSIKIWDKQTLECL-KILTGHTGSVLCLQYDE-------RV 277
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW-RAS-- 368
+ D +R+WDV + + L H +V +R+ +GL+ + S+DR+I VW AS
Sbjct: 278 IVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFC-NGLMVTCSKDRSIAVWDMASPT 336
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLM--------RVEATSTGGFKYDPANPEESSKHALA 420
D + R L GH VN + Y++ +V +TST F K +A
Sbjct: 337 DISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEF----VRTLNGHKRGIA 392
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++
Sbjct: 393 CLQYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAY 446
Query: 481 DKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
D IK+WD + + TL H V+ + + D ++S S D T+ +W+
Sbjct: 447 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 503
Score = 227 (85.0 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 67/248 (27%), Positives = 124/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q ++ + +++ V C+++ +I S +D +IK+W + L GH V L L
Sbjct: 216 QRIQCRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKQTLECLKILTGHTGSV--LCLQ 272
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + V +S + N E H A + G +V+ S D ++ +W+
Sbjct: 273 YDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNG-LMVTCSKDRSIAVWD 331
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
SL R + GH+ +N V+F D + I SAS D++IK+W +F+ TL GH +
Sbjct: 332 MASPTDISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 389
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 390 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 445
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 446 YDGKIKVW 453
Score = 209 (78.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 66/262 (25%), Positives = 117/262 (44%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV + L H VL + +
Sbjct: 257 CLKILTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFC 314
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S T + + + GH+ + + ++ ++ ++SG
Sbjct: 315 --NGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYI------VSASG 366
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 367 -DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 424
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 425 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 482
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + ++S S D T+ +W+
Sbjct: 483 LQFDEFQ-IISSSHDDTILIWD 503
Score = 186 (70.5 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 72/282 (25%), Positives = 125/282 (44%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+ SG D +++ WD T L GH VLC+ + D + +V+G + + WD ++G
Sbjct: 238 IISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNSG 295
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSH 338
+ + + H + + HL + KD +I +WD+ + RVL H
Sbjct: 296 EVLNTLIH-HNEAV-------LHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGH 347
Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
+V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 348 RAAVNVVDFDDKYIV-SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLV-VSG 404
Query: 399 TSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------PEK 448
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 405 SSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 463
Query: 449 EKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F + +II+S S D +I +WD
Sbjct: 464 PASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWD 503
Score = 144 (55.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 383 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 438
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 439 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDT 498
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 499 ILIWDFL 505
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 47/180 (26%), Positives = 82/180 (45%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C + GH +V+ +++ R + +GS D+TVR WDV + L T L + NE
Sbjct: 257 CLKILTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNSGEVL----NT--LIHHNEAV 308
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
+ + L + T + + + V+ + + + R + GH AV V F + +
Sbjct: 309 LHLRFCNGLMV-TCSKDRSI-AVWDMASPTDIS-LRRV---LVGHRAAVNVVDF--DDKY 360
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+ S SGD T++ W +T + GHK + C+ + + +VSG + I WD G
Sbjct: 361 IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG 418
Score = 45 (20.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 17/75 (22%), Positives = 34/75 (45%)
Query: 125 LASGSGDTTVRFWDVTTQTPLFKCEGTP----YLFYVNETEITKTLADVLPLDTLNTEEV 180
+ SG D +++ WD T L G L Y +T + + + +N+ EV
Sbjct: 238 IISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNSGEV 297
Query: 181 VD-IVYQKQAVFQVR 194
++ +++ +AV +R
Sbjct: 298 LNTLIHHNEAVLHLR 312
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 263 (97.6 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 57/163 (34%), Positives = 87/163 (53%)
Query: 417 HALAKYQAQ-CPEGEKLVSGSDDFTLFLWNPEKEKKSLA---RMTGHQQLINCVEFSPDG 472
H L Y +G +VSGS D +W+ EK K + G + + V SPDG
Sbjct: 368 HELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDG 427
Query: 473 RIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
R++A+ S D ++LWD + G F+ GH+ +VY VA+S D + L SGS D +LK+W++
Sbjct: 428 RLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLS 487
Query: 533 ----TKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ GH D V +V ++PDG + SG KD+ ++ W
Sbjct: 488 GSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFW 530
Score = 255 (94.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 85/303 (28%), Positives = 136/303 (44%)
Query: 248 HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI----GQPMRGHKQWITALSWEPF 303
H V C+ +S D K L +GC N +D TGK++ + + +I ++ + P
Sbjct: 280 HNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTI 362
N+ A+ +D +++WD+ + H + + + G I S S D+
Sbjct: 339 G-NY----LATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKA 393
Query: 363 KVWRASDGVMCRTLE----GHAHWVNTLALSTDYLMRVEATSTGGFK--YDPANP---EE 413
K+W G TL G + V ++A+S D + V A S +D E
Sbjct: 394 KIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRL-VAAGSLDNIVRLWDAQTGYFLER 452
Query: 414 SSKHALAKYQ-AQCPEGEKLVSGSDDFTLFLWNPEKEK-KSLARMT--GHQQLINCVEFS 469
H + Y A P+G+ L SGS D +L LW+ + +S R T GH+ + V FS
Sbjct: 453 YEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFS 512
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR---LLVSGSADSTL 526
PDG + S S D+S++ WD R G L+GH +V VA S + + +GS D
Sbjct: 513 PDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRS 572
Query: 527 KVW 529
++W
Sbjct: 573 RLW 575
Score = 242 (90.2 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 65/221 (29%), Positives = 105/221 (47%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH + S+ +S +GR + SGSGD + WD+ F G + N
Sbjct: 367 GHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTL-GNEEVGPKNGVTSVAMSP 425
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
D + + + +V + + F R GH ++V SV FSP+G+SLASGS
Sbjct: 426 DGRLVAAGSLDNIVRLWDAQTGYFLER--------YEGHLDSVYSVAFSPDGKSLASGSL 477
Query: 228 DTTVRFWDVTTQTPLFKCE----GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
D +++ WD++ +C GHK +VL +A+SPD L+SG K+ + WD G
Sbjct: 478 DKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTT 537
Query: 284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
++GHK + +++ P + +H FA+ D R+W
Sbjct: 538 -HMMLQGHKNSVISVALSPKNNSHGV--FATGSGDFRSRLW 575
Score = 232 (86.7 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 77/265 (29%), Positives = 123/265 (46%)
Query: 115 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLD- 173
SV FSP+G LA+G+ D TV+ WD+ T+ K + T FY +E D+ LD
Sbjct: 332 SVCFSPDGNYLATGAEDKTVKVWDIHTK----KIQHT---FYGHEL-------DIYSLDY 377
Query: 174 TLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMP----GHAEAVISVKFSPNGRSLASGSGD 228
+ + +V K+A ++ + +C ++ G V SV SP+GR +A+GS D
Sbjct: 378 SSDGRFIVSGSGDKKAKIWDIEK-GKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLD 436
Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ-- 286
VR WD T L + EGH V +A+SPD K L SG + + WD S + +
Sbjct: 437 NIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCR 496
Query: 287 -PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI 345
GHK ++ ++++ P S KD +++ WD +L H SV +
Sbjct: 497 ATFNGHKDFVLSVAFSP-----DGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISV 551
Query: 346 ----RWGGSGLIYSASQDRTIKVWR 366
+ G+ + S D ++W+
Sbjct: 552 ALSPKNNSHGVFATGSGDFRSRLWK 576
Score = 223 (83.6 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 79/309 (25%), Positives = 139/309 (44%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H V V FS +G+ LA+G + + + +DV T G +V+E+E L
Sbjct: 280 HNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDT--------GKKVHAFVDESEKDGDLYI 330
Query: 169 VLPLDTLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
+ + + K V+ + + + GH + S+ +S +GR + SGSG
Sbjct: 331 RSVCFSPDGNYLATGAEDKTVKVWDIH-TKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 228 DTTVRFWDVTTQTPLFKCE----GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
D + WD+ F G K+ V +A SPD + + +G + ++ WD+ TG
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYF 449
Query: 284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI----LSQCVRVLTSHT 339
+ + GH + ++++ P + AS D ++++WD+ S+C H
Sbjct: 450 L-ERYEGHLDSVYSVAFSP-----DGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHK 503
Query: 340 RSVTCIRWG--GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMR-V 396
V + + GS LI S S+DR+++ W +G L+GH + V ++ALS V
Sbjct: 504 DFVLSVAFSPDGSWLI-SGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGV 562
Query: 397 EATSTGGFK 405
AT +G F+
Sbjct: 563 FATGSGDFR 571
Score = 218 (81.8 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 78/305 (25%), Positives = 125/305 (40%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGHKH---WVLCIAWSPD 260
H V V FS +G+ LA+G + + + +DV T + F E K ++ + +SPD
Sbjct: 280 HNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DG 319
L +G ++ + WD T K+I GH+ I +L + RF SG D
Sbjct: 339 GNYLATGAEDKTVKVWDIHT-KKIQHTFYGHELDIYSLDYS------SDGRFIVSGSGDK 391
Query: 320 AIRIWDVILSQCVRVLTSHT----RSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCR 374
+IWD+ +C L + VT + G L+ + S D +++W A G
Sbjct: 392 KAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLE 451
Query: 375 TLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ---------AQ 425
EGH V ++A S D + K + S A + A
Sbjct: 452 RYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAF 511
Query: 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR---IIASASFDK 482
P+G L+SGS D ++ W+P + + GH+ + V SP + A+ S D
Sbjct: 512 SPDGSWLISGSKDRSVQFWDPRNGTTHMM-LQGHKNSVISVALSPKNNSHGVFATGSGDF 570
Query: 483 SIKLW 487
+LW
Sbjct: 571 RSRLW 575
Score = 203 (76.5 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 43/113 (38%), Positives = 65/113 (57%)
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
I V FSPDG +A+ + DK++K+WD K T GH +Y + +SSD R +VSGS
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 523 DSTLKVWNMKTKK----IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
D K+W+++ K + + G + V +V +PDG VA+G D ++RLW
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLW 442
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 200 (75.5 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 70/299 (23%), Positives = 136/299 (45%)
Query: 290 GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG 349
GH+ + LS+ ++ S+ D +I+IW+ QC+R + + G
Sbjct: 413 GHRSDVRTLSFSSDNI-----AILSAAAD-SIKIWNRSTLQCIRTMACEYALCSFFVPGD 466
Query: 350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKY--- 406
++ + ++++ + G + T++ H + +L+LS D V + K+
Sbjct: 467 RQVVIGTKTGK-LQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDF 525
Query: 407 DPANPEESSKHALAKYQAQ---------CPE---GEKLVSGSD-DFTLFLWNPEKEKKSL 453
+ E S++ L+ Q + C +KL++ S D T+ ++ + K L
Sbjct: 526 ELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFL 585
Query: 454 ARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD 513
+ + GH+ + C++ S DG +IA+ S D+++K+W G +L H +V + +
Sbjct: 586 S-LYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPK 644
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
S L + D +K W+ + Q L GH E++ + +P G+ V S DK LRLW+
Sbjct: 645 SHLFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 195 (73.7 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 73/314 (23%), Positives = 137/314 (43%)
Query: 194 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL--FKCEGHKHW 251
+PV ++ GH V ++ FS + ++ S + D+ ++ W+ +T + CE +
Sbjct: 402 QPVRTNRITIGGHRSDVRTLSFSSDNIAILSAAADS-IKIWNRSTLQCIRTMACE----Y 456
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
LC + P +Q+V G K G + +D ++G + + + H + +LS P R
Sbjct: 457 ALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLL-ETIDAHDGALWSLSLSPDQ-----RG 510
Query: 312 FASSGKDGAIRIWDVIL-----SQCVRVLTSHTRS------VTCIRWGGSGLIYSASQ-D 359
F + G D +++ WD L S R+ TR+ V C+ + + + + S D
Sbjct: 511 FVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLD 570
Query: 360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL 419
T+K++ +L GH V + +S D + ++ K + + K
Sbjct: 571 CTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLF 630
Query: 420 AK-----YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRI 474
A Y P+ + D + W+ +K + + + GH Q I C+ SP G
Sbjct: 631 AHDDSVMYLRFVPKSHLFFTAGKDRKIKQWDADKFEH-IQTLEGHHQEIWCLAVSPSGDY 689
Query: 475 IASASFDKSIKLWD 488
+ S+S DKS++LW+
Sbjct: 690 VVSSSHDKSLRLWE 703
Score = 172 (65.6 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 73/312 (23%), Positives = 134/312 (42%)
Query: 97 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFY 156
+PV ++ GH V ++ FS + ++ S + D+ ++ W+ +T +C T Y
Sbjct: 402 QPVRTNRITIGGHRSDVRTLSFSSDNIAILSAAADS-IKIWNRST----LQCIRTMACEY 456
Query: 157 VNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFS 216
+ +P D + V+ K ++ + ++ H A+ S+ S
Sbjct: 457 A-------LCSFFVPGDR---QVVIGTKTGKLQLYDLAS-GNLLETIDAHDGALWSLSLS 505
Query: 217 PNGRSLASGSGDTTVRFWDV-------TTQTPLFKCEGHK----HWVLCIAWSPDSKQLV 265
P+ R +G D +V+FWD +TQ L + VLC+++SP+ K L
Sbjct: 506 PDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLA 565
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ + + T K + GHK + + +++ A+ D ++IW
Sbjct: 566 VSLLDCTVKIFYVDTLKFF-LSLYGHKLPVICMD-----ISYDGALIATGSADRNVKIWG 619
Query: 326 VILSQCVRVLTSHTRSVTCIRW-GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAH--W 382
+ C + L +H SV +R+ S L ++A +DR IK W A +TLEGH W
Sbjct: 620 LDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIW 679
Query: 383 VNTLALSTDYLM 394
++ S DY++
Sbjct: 680 CLAVSPSGDYVV 691
Score = 171 (65.3 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 82/354 (23%), Positives = 154/354 (43%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH A+ S+K+ G LASGS DT + WDV ++ L++ +GHK + + + L
Sbjct: 105 GHKAAITSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLL 164
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
V+ K+ ++ WD T + + M GH+ + W ++ + +R + D +R W
Sbjct: 165 VTSGKDTMVKWWDLDT-QHCFKTMVGHRTEV----WGLVLVSEE-KRLITGASDSELRAW 218
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSGLIYS-ASQDRTIKVWRA-SDGVM-CRTL----- 376
D+ Q + I+ G+ S ++D T+++ D ++ CR
Sbjct: 219 DISYLQ--EIEDPEEPEPKKIKESSPGIQDSHEAEDGTLEMDETPEDRILTCRKAGSIMR 276
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE-----SSKHALAKYQAQ---CPE 428
EG VN T ++ T + + + EE K AK +A+ C E
Sbjct: 277 EGRDRVVNLAVDKTGRILACHGTDSVLEVFCILSKEEIQKKMDKKMKKAKKKAKLNSCNE 336
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS-IKLW 487
E+ + + TL E ++ + + + + + + +P G + A + ++L+
Sbjct: 337 EEEDLEVNVKMTL---QDEIQRVANIKTSAKIKSFDLIH-TPQGELKAVFLLQNNLVELY 392
Query: 488 D------GR--IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
G + T+ GH V +++SSD+ ++S +ADS +K+WN T
Sbjct: 393 SLNASTPGPQPVRTNRITIGGHRSDVRTLSFSSDNIAILSAAADS-IKIWNRST 445
Score = 156 (60.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 38/155 (24%), Positives = 76/155 (49%)
Query: 421 KYQAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIA 476
K++ C P+G L G +D ++ +++ + ++ GH+ I +++ G +A
Sbjct: 65 KHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVT-FNGHKAAITSLKYDQLGGRLA 123
Query: 477 SASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI 536
S S D I +WD + L+GH A+ + + LLV+ D+ +K W++ T+
Sbjct: 124 SGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHC 183
Query: 537 EQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ + GH EV+ + + +++ +G D LR W
Sbjct: 184 FKTMVGHRTEVWGLVLVSEEKRLITGASDSELRAW 218
Score = 154 (59.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 57/224 (25%), Positives = 97/224 (43%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEIT 163
++ H A+ S+ SP+ R +G D +V+FWD L K E T V +T
Sbjct: 491 TIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFE----LVKDENSTQKRLSVKQTRTL 546
Query: 164 KTLADVLPLDTLNTEEV--VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
+ +VL + +++ V ++ +F V + + S+ GH VI + S +G
Sbjct: 547 QLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTL-KFFLSLYGHKLPVICMDISYDGAL 605
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+A+GS D V+ W + H V+ + + P S + K+ I WD+
Sbjct: 606 IATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWDADKF 665
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ I Q + GH Q I L+ P SS D ++R+W+
Sbjct: 666 EHI-QTLEGHHQEIWCLAVSP-----SGDYVVSSSHDKSLRLWE 703
Score = 146 (56.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 45/162 (27%), Positives = 71/162 (43%)
Query: 231 VRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRG 290
V WD+ + +G KH V C+ SPD L G ++G I + +G+ G
Sbjct: 47 VFIWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEG-NVTFNG 105
Query: 291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT-CIRWGG 349
HK IT+L ++ R AS KD I +WDVI + L H ++T +
Sbjct: 106 HKAAITSLKYDQLG-----GRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLRE 160
Query: 350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
L+ ++ +D +K W +T+ GH V L L ++
Sbjct: 161 KNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSE 202
Score = 143 (55.4 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 45/180 (25%), Positives = 80/180 (44%)
Query: 364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEES---SKHAL 419
+W G L+G H V L S D L G + + + E + + H
Sbjct: 49 IWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKA 108
Query: 420 AKYQAQCPE-GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
A + + G +L SGS D + +W+ E L R+ GH+ I F + ++ ++
Sbjct: 109 AITSLKYDQLGGRLASGSKDTDIIVWDVINES-GLYRLKGHKDAITQALFLREKNLLVTS 167
Query: 479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK-TKKIE 537
D +K WD T+ GH V+ + S+ + L++G++DS L+ W++ ++IE
Sbjct: 168 GKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGASDSELRAWDISYLQEIE 227
Score = 137 (53.3 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 35/131 (26%), Positives = 64/131 (48%)
Query: 441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG 500
+F+W+ K +K L + G + + C+ SPDG +A D SI+++ G+ T G
Sbjct: 47 VFIWDLRKGEKILI-LQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNG 105
Query: 501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVA 560
H A+ + + L SGS D+ + VW++ + L GH D + + + +
Sbjct: 106 HKAAITSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLV 165
Query: 561 SGGKDKVLRLW 571
+ GKD +++ W
Sbjct: 166 TSGKDTMVKWW 176
Score = 118 (46.6 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 44/169 (26%), Positives = 71/169 (42%)
Query: 119 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTE 178
SP+G LA G D ++R + L EG F ++ IT D L +
Sbjct: 74 SPDGLHLAVGYEDGSIRIFS------LLSGEGN-VTFNGHKAAITSLKYDQLGGRLASGS 126
Query: 179 EVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 238
+ DI+ V + R + GH +A+ F L + DT V++WD+ T
Sbjct: 127 KDTDIIVWD--VINESGLYR----LKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDT 180
Query: 239 QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
Q GH+ V + + K+L++G + + AWD S ++I P
Sbjct: 181 QHCFKTMVGHRTEVWGLVLVSEEKRLITGASDSELRAWDISYLQEIEDP 229
Score = 118 (46.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 63/268 (23%), Positives = 105/268 (39%)
Query: 194 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVL 253
R +C +M E + F P R + G+ ++ +D+ + L + H +
Sbjct: 443 RSTLQCIRTMA--CEYALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALW 500
Query: 254 CIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMR--GHKQWITA-LSWEPFHLNHQCR 310
++ SPD + V+G + + WD K + KQ T L E +++
Sbjct: 501 SLSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPN 560
Query: 311 R--FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC--IRWGGSGLIYSASQDRTIKVWR 366
+ A S D ++I+ V + L H V C I + G+ LI + S DR +K+W
Sbjct: 561 QKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGA-LIATGSADRNVKIWG 619
Query: 367 ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ--- 423
G ++L H V L + A K A+ E + +Q
Sbjct: 620 LDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIW 679
Query: 424 --AQCPEGEKLVSGSDDFTLFLWNPEKE 449
A P G+ +VS S D +L LW +E
Sbjct: 680 CLAVSPSGDYVVSSSHDKSLRLWERTRE 707
Score = 112 (44.5 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 35/130 (26%), Positives = 59/130 (45%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH A+ S+K+ G LASGS DT + WDV ++ L++ +G ++ IT+ L
Sbjct: 105 GHKAAITSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKG-------HKDAITQAL- 156
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
L L D + + + C +M GH V + + L +G+
Sbjct: 157 -FLREKNLLVTSGKDTMVKWWDL----DTQHCFKTMVGHRTEVWGLVLVSEEKRLITGAS 211
Query: 228 DTTVRFWDVT 237
D+ +R WD++
Sbjct: 212 DSELRAWDIS 221
Score = 65 (27.9 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ 142
+ GH +A+ F L + DT V++WD+ TQ
Sbjct: 145 LKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQ 181
Score = 60 (26.2 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 140
C +M GH V + + L +G+ D+ +R WD++
Sbjct: 183 CFKTMVGHRTEVWGLVLVSEEKRLITGASDSELRAWDIS 221
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 247 (92.0 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 76/300 (25%), Positives = 137/300 (45%)
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEP--- 302
GH + + W+ DSK LVS ++G + WD+ +T K P+R W+ ++ P
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRS--SWVMTCAYAPSGN 110
Query: 303 F----HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ 358
F L++ C ++ ++G +++ R L++HT ++C R+ I ++S
Sbjct: 111 FVACGGLDNMCSIYSLKSREGNVKV--------SRELSAHTGYLSCCRFLDDNNIVTSSG 162
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418
D T +W G GH +LA+S D+ + + K E + +
Sbjct: 163 DTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVR-EGTCRQT 221
Query: 419 LAKYQAQ----C--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL--INCVEFSP 470
+++ C P GE + +GSDD + L++ +++ L + + I V FS
Sbjct: 222 FTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQE-LTAYSDESIICGITSVAFSL 280
Query: 471 DGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
GR++ + D + +WD G+ + L GH V + ++D + +GS DS LKVWN
Sbjct: 281 SGRLLFAGYDDFNCNIWDSMKGERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVWN 340
Score = 207 (77.9 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 71/298 (23%), Positives = 127/298 (42%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+RGH I A+ W + S+ +DG + +WD + V + + V +
Sbjct: 51 LRGHLAKIYAMHWAT-----DSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAY 105
Query: 348 GGSG-LIYSASQDRTIKVW--RASDG--VMCRTLEGHAHWVNTLALSTDYLMRVEATSTG 402
SG + D ++ ++ +G + R L H +++ D + + T
Sbjct: 106 APSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTT 165
Query: 403 GFKYDPANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
+D ++ K + C P+ + +SG+ D + LW+ +E
Sbjct: 166 CALWDIETGQQ--KTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDV-REGTCRQTF 222
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAWSSDS 514
TGH+ IN + F P+G I + S D S +L+D R + +T + + VA+S
Sbjct: 223 TGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSDESIICGITSVAFSLSG 282
Query: 515 RLLVSGSADSTLKVWN-MKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
RLL +G D +W+ MK +++ L GH + V + DG VA+G D L++W
Sbjct: 283 RLLFAGYDDFNCNIWDSMKGERVGI-LSGHDNRVSCLGVTADGMAVATGSWDSFLKVW 339
Score = 197 (74.4 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 74/343 (21%), Positives = 142/343 (41%)
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
++ K +AD T + ++V + V +V+ TR T + GH + ++ ++ + +
Sbjct: 13 QLKKQIADARKACADTT--LAELVSGLEVVGRVQMRTRRT--LRGHLAKIYAMHWATDSK 68
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV--IHAWDS 278
L S S D + WD T + WV+ A++P + G + + I++ S
Sbjct: 69 LLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKS 128
Query: 279 STGK-QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS 337
G ++ + + H +++ + L+ SSG D +WD+ Q V
Sbjct: 129 REGNVKVSRELSAHTGYLSCCRF----LDDN-NIVTSSG-DTTCALWDIETGQQKTVFVG 182
Query: 338 HTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
HT + L S + D + K+W +G +T GH +N + +
Sbjct: 183 HTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAIC----FFPNG 238
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQAQ---CP--------EGEKLVSGSDDFTLFLWN 445
EA TG + + L Y + C G L +G DDF +W+
Sbjct: 239 EAICTGSDDASCRLFDLRADQELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWD 298
Query: 446 PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
K ++ + ++GH ++C+ + DG +A+ S+D +K+W+
Sbjct: 299 SMKGER-VGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVWN 340
Score = 194 (73.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 56/208 (26%), Positives = 98/208 (47%)
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK-HAL---AKYQAQC--- 426
RTL GH + + +TD + V A+ G K + ++K HA+ + + C
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDG--KLIVWDTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 427 PEGEKLVSGSDD--FTLF-LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
P G + G D +++ L + E K ++ H ++C F D I+ S+ D +
Sbjct: 107 PSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTT 165
Query: 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
LWD G+ T GH +A S D +L +SG+ D++ K+W+++ Q GH
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++ A+ + P+GE + +G D RL+
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLF 253
Score = 164 (62.8 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 75/331 (22%), Positives = 135/331 (40%)
Query: 64 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 123
++ K +AD T + ++V + V +V+ TR T + GH + ++ ++ + +
Sbjct: 13 QLKKQIADARKACADTT--LAELVSGLEVVGRVQMRTRRT--LRGHLAKIYAMHWATDSK 68
Query: 124 SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183
L S S D + WD T K P T + + L + + I
Sbjct: 69 LLVSASQDGKLIVWDTYTTN---KVHAIPLRSSWVMTCAYAPSGNFVACGGL--DNMCSI 123
Query: 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF 243
K V+ V+R S+ G+ +F + ++ + SGDTT WD+ T
Sbjct: 124 YSLKSREGNVK-VSRELSAHTGYLSCC---RFLDDN-NIVTSSGDTTCALWDIETGQQKT 178
Query: 244 KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF 303
GH + +A SPD K +SG + WD G Q GH+ I A+ + P
Sbjct: 179 VFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGT-CRQTFTGHESDINAICFFP- 236
Query: 304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR--SVTCIRWGGSG-LIYSASQDR 360
N + + D + R++D+ Q + + + +T + + SG L+++ D
Sbjct: 237 --NGEA--ICTGSDDASCRLFDLRADQELTAYSDESIICGITSVAFSLSGRLLFAGYDDF 292
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
+W + G L GH + V+ L ++ D
Sbjct: 293 NCNIWDSMKGERVGILSGHDNRVSCLGVTAD 323
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 247 (92.0 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 76/300 (25%), Positives = 137/300 (45%)
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEP--- 302
GH + + W+ DSK LVS ++G + WD+ +T K P+R W+ ++ P
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRS--SWVMTCAYAPSGN 110
Query: 303 F----HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ 358
F L++ C ++ ++G +++ R L++HT ++C R+ I ++S
Sbjct: 111 FVACGGLDNMCSIYSLKSREGNVKV--------SRELSAHTGYLSCCRFLDDNNIVTSSG 162
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418
D T +W G GH +LA+S D+ + + K E + +
Sbjct: 163 DTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVR-EGTCRQT 221
Query: 419 LAKYQAQ----C--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL--INCVEFSP 470
+++ C P GE + +GSDD + L++ +++ L + + I V FS
Sbjct: 222 FTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQE-LTAYSDESIICGITSVAFSL 280
Query: 471 DGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
GR++ + D + +WD G+ + L GH V + ++D + +GS DS LKVWN
Sbjct: 281 SGRLLFAGYDDFNCNIWDSMKGERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVWN 340
Score = 207 (77.9 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 71/298 (23%), Positives = 127/298 (42%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+RGH I A+ W + S+ +DG + +WD + V + + V +
Sbjct: 51 LRGHLAKIYAMHWAT-----DSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAY 105
Query: 348 GGSG-LIYSASQDRTIKVW--RASDG--VMCRTLEGHAHWVNTLALSTDYLMRVEATSTG 402
SG + D ++ ++ +G + R L H +++ D + + T
Sbjct: 106 APSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTT 165
Query: 403 GFKYDPANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
+D ++ K + C P+ + +SG+ D + LW+ +E
Sbjct: 166 CALWDIETGQQ--KTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDV-REGTCRQTF 222
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAWSSDS 514
TGH+ IN + F P+G I + S D S +L+D R + +T + + VA+S
Sbjct: 223 TGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSDESIICGITSVAFSLSG 282
Query: 515 RLLVSGSADSTLKVWN-MKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
RLL +G D +W+ MK +++ L GH + V + DG VA+G D L++W
Sbjct: 283 RLLFAGYDDFNCNIWDSMKGERVGI-LSGHDNRVSCLGVTADGMAVATGSWDSFLKVW 339
Score = 195 (73.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 70/324 (21%), Positives = 135/324 (41%)
Query: 180 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ 239
+ ++V + V +V+ TR T + GH + ++ ++ + + L S S D + WD T
Sbjct: 30 LAELVSGLEVVGRVQMRTRRT--LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTT 87
Query: 240 TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV--IHAWDSSTGK-QIGQPMRGHKQWIT 296
+ WV+ A++P + G + + I++ S G ++ + + H +++
Sbjct: 88 NKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLS 147
Query: 297 ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYS 355
+ L+ SSG D +WD+ Q V HT + L S
Sbjct: 148 CCRF----LDDN-NIVTSSG-DTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFIS 201
Query: 356 ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS 415
+ D + K+W +G +T GH +N + + EA TG + +
Sbjct: 202 GACDASAKLWDVREGTCRQTFTGHESDINAIC----FFPNGEAICTGSDDASCRLFDLRA 257
Query: 416 KHALAKYQAQ---CP--------EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN 464
L Y + C G L +G DDF +W+ K ++ + ++GH ++
Sbjct: 258 DQELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGER-VGILSGHDNRVS 316
Query: 465 CVEFSPDGRIIASASFDKSIKLWD 488
C+ + DG +A+ S+D +K+W+
Sbjct: 317 CLGVTADGMAVATGSWDSFLKVWN 340
Score = 194 (73.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 56/208 (26%), Positives = 98/208 (47%)
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK-HAL---AKYQAQC--- 426
RTL GH + + +TD + V A+ G K + ++K HA+ + + C
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDG--KLIVWDTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 427 PEGEKLVSGSDD--FTLF-LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
P G + G D +++ L + E K ++ H ++C F D I+ S+ D +
Sbjct: 107 PSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTT 165
Query: 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
LWD G+ T GH +A S D +L +SG+ D++ K+W+++ Q GH
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++ A+ + P+GE + +G D RL+
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLF 253
Score = 162 (62.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 71/312 (22%), Positives = 128/312 (41%)
Query: 83 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ 142
+ ++V + V +V+ TR T + GH + ++ ++ + + L S S D + WD T
Sbjct: 30 LAELVSGLEVVGRVQMRTRRT--LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTT 87
Query: 143 TPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS 202
K P T + + L + + I K V+ V+R S+
Sbjct: 88 N---KVHAIPLRSSWVMTCAYAPSGNFVACGGL--DNMCSIYSLKSREGNVK-VSRELSA 141
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
G+ +F + ++ + SGDTT WD+ T GH + +A SPD K
Sbjct: 142 HTGYLSCC---RFLDDN-NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFK 197
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
+SG + WD G Q GH+ I A+ + P N + + D + R
Sbjct: 198 LFISGACDASAKLWDVREGT-CRQTFTGHESDINAICFFP---NGEA--ICTGSDDASCR 251
Query: 323 IWDVILSQCVRVLTSHTR--SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGH 379
++D+ Q + + + +T + + SG L+++ D +W + G L GH
Sbjct: 252 LFDLRADQELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGERVGILSGH 311
Query: 380 AHWVNTLALSTD 391
+ V+ L ++ D
Sbjct: 312 DNRVSCLGVTAD 323
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 259 (96.2 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 87/303 (28%), Positives = 137/303 (45%)
Query: 83 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFW--DVT 140
V +IV ++ + S G + V+FS NG ASGS V+ W D
Sbjct: 145 VPEIVLSGKSSIEHLQKAELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNL 204
Query: 141 TQTPLFKCEGTPYLFYVNETEITKTL-ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRC 199
++ LF+ T + ++ + + AD L TL T + V +A Q P+ R
Sbjct: 205 SEVQLFRGH-TDRVSGLDWYPLCQAWDADSEQL-TLATGAADNTVCLWKAS-QSTPLLR- 260
Query: 200 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP 259
+ GH V V F P+G L S S DTT R WDV T L EGH + IA P
Sbjct: 261 ---LEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQP 317
Query: 260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG 319
D + SG + + WD +GK I + H + I A++W P +Q A+S D
Sbjct: 318 DGSLVSSGGNDAIGRIWDLRSGKSI-MVLDEHIRQIVAMAWSPN--GYQ---LATSSADD 371
Query: 320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL---IYSASQDRTIKVWRASDGVMCRTL 376
++IWD+ + +H+ V+ +R+ SG+ I ++ D +K+W + + +++
Sbjct: 372 TVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSM 431
Query: 377 EGH 379
GH
Sbjct: 432 VGH 434
Score = 238 (88.8 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 74/279 (26%), Positives = 130/279 (46%)
Query: 312 FASSGKDGAIRIWDVI-LSQCVRVLTSHTRSVT-------CIRWGGSG---LIYSASQDR 360
FAS G +++W+ LS+ V++ HT V+ C W + + + D
Sbjct: 187 FASGSWGGQVKVWNSDNLSE-VQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADN 245
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLAL--STDYLMRVEATSTGGFKYDPANPEE---SS 415
T+ +W+AS LEGH V +A S DYL+ +T +D E
Sbjct: 246 TVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRL-WDVHTGVELLMQE 304
Query: 416 KHALAKYQAQC-PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRI 474
H+ + C P+G + SG +D +W+ + KS+ + H + I + +SP+G
Sbjct: 305 GHSEGIFSIACQPDGSLVSSGGNDAIGRIWDL-RSGKSIMVLDEHIRQIVAMAWSPNGYQ 363
Query: 475 IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW--SSDSRLLVSGSADSTLKVWNMK 532
+A++S D ++K+WD R T+ H V V + S +R + + D +K+WN
Sbjct: 364 LATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPL 423
Query: 533 TKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ + + GH ++V +VD G++ S G D+ ++LW
Sbjct: 424 NCSLIKSMVGHEEKVMSVDGY--GDRFISSGYDRTIKLW 460
Score = 229 (85.7 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 65/232 (28%), Positives = 106/232 (45%)
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+LA+G+ D TV W + TPL + EGH V +A+ P LVS + WD T
Sbjct: 237 TLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHT 296
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR 340
G ++ GH + I +++ +P +S G D RIWD+ + + VL H R
Sbjct: 297 GVELLM-QEGHSEGIFSIACQP-----DGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIR 350
Query: 341 SVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT 399
+ + W +G + ++S D T+K+W + T+ H+ V+ + + R AT
Sbjct: 351 QIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIAT 410
Query: 400 S--TGGFK-YDPANPE--ESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNP 446
S G K ++P N +S K + G++ +S D T+ LW P
Sbjct: 411 SGYDGCVKLWNPLNCSLIKSMVGHEEKVMSVDGYGDRFISSGYDRTIKLWYP 462
Score = 222 (83.2 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 68/249 (27%), Positives = 111/249 (44%)
Query: 340 RSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVMCRTLEGHAHWVNTL-------ALSTD 391
R + +R+ +G + S S +KVW + + + GH V+ L A D
Sbjct: 173 RPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDAD 232
Query: 392 YLMRVEATSTGG-----FKYDPANPEESSKHALAKYQ--AQCPEGEKLVSGSDDFTLFLW 444
AT +K + P + LA+ A P G+ LVS S D T LW
Sbjct: 233 SEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLW 292
Query: 445 NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
+ + L + GH + I + PDG +++S D ++WD R GK I L H++
Sbjct: 293 DVHTGVELLMQ-EGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQ 351
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK--VASG 562
+ +AWS + L + SAD T+K+W+++ + +P H V V + G +A+
Sbjct: 352 IVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATS 411
Query: 563 GKDKVLRLW 571
G D ++LW
Sbjct: 412 GYDGCVKLW 420
Score = 201 (75.8 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 41/161 (25%), Positives = 77/161 (47%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH+E + S+ P+G ++SG D R WD+ + + + H ++ +AWSP+ QL
Sbjct: 305 GHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQL 364
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
+ + + WD + + H ++ + + +N R A+SG DG +++W
Sbjct: 365 ATSSADDTVKIWDLRK-VSLAHTIPAHSSLVSDVRYIESGVN---RFIATSGYDGCVKLW 420
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW 365
+ + ++ + H V + G I S+ DRTIK+W
Sbjct: 421 NPLNCSLIKSMVGHEEKVMSVDGYGDRFI-SSGYDRTIKLW 460
Score = 131 (51.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 46/170 (27%), Positives = 74/170 (43%)
Query: 413 ESSKHALAKYQ--AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP 470
E +K L K + ++ P E ++SG ++ + + G ++ I V FS
Sbjct: 128 EKAKLRLKKEREISEIPVPEIVLSGKSSIEHL-----QKAELMGSQIGGERPIAIVRFSN 182
Query: 471 DGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV-----YMV--AWSSDSR--LLVSGS 521
+G AS S+ +K+W+ + RGH V Y + AW +DS L +G+
Sbjct: 183 NGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGA 242
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
AD+T+ +W L GH V V + P G+ + S D RLW
Sbjct: 243 ADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLW 292
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 176 (67.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 39/145 (26%), Positives = 71/145 (48%)
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
+G L SG D ++ +W+ + + A GH+ + + F+ G I+ S S D + +W
Sbjct: 70 DGALLASGYSDGSIRIWSMS-DYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVW 128
Query: 488 DGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
D + LRGH + V S L++ S D +K+W+ +T+ Q + GH + +
Sbjct: 129 DIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPI 188
Query: 548 YAVDWAPDGEKVASGGKDKVLRLWQ 572
+ +D PD ++ S D +R W+
Sbjct: 189 WGIDVNPDETRLCSCTSDNQIRFWR 213
Score = 164 (62.8 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 44/158 (27%), Positives = 72/158 (45%)
Query: 210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
V +V S +G LASG D ++R W ++ GH+ V + ++ LVSG K
Sbjct: 62 VTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSK 121
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS 329
+ + WD T + + +RGH+ IT++ L + +S KDG I+IWD
Sbjct: 122 DTEVIVWDIITESGLFR-LRGHRDQITSVK-----LLERSNHLITSSKDGFIKIWDTETQ 175
Query: 330 QCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWR 366
C++ + H + I + S + D I+ WR
Sbjct: 176 HCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFWR 213
Score = 163 (62.4 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 40/122 (32%), Positives = 59/122 (48%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH +V ++ F+ G L SGS DT V WD+ T++ LF+ GH+ + + S L
Sbjct: 99 GHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHL 158
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
++ K+G I WD+ T I Q + GH+ I W +N R S D IR W
Sbjct: 159 ITSSKDGFIKIWDTETQHCI-QTIVGHRNPI----WG-IDVNPDETRLCSCTSDNQIRFW 212
Query: 325 DV 326
+
Sbjct: 213 RI 214
Score = 155 (59.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 64/299 (21%), Positives = 131/299 (43%)
Query: 290 GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG 349
GH+ I +LS L+ + S+ + ++++W++ C+R + T G
Sbjct: 394 GHRSDIRSLS-----LSSNDQMLVSTSSE-SVKVWNMKSLSCIRSIACDYGLCTVFAPGN 447
Query: 350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY--LMRVEATSTGGF-KY 406
+I ++ TI+V+ + +++ H V +L L+ D + A F +
Sbjct: 448 LHVIVG-TKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWDF 506
Query: 407 DPANPEESSKHA---LAKYQAQCPEGEKLV---SGSDDF--------TLFLWNPEKEKKS 452
+ +E+SKH L+ + E + L S + F T+ ++ + K
Sbjct: 507 ELIASQENSKHKVLNLSLTKTLKVESDVLALKYSADNKFLAVSLLDNTVKIFYTDTVKFH 566
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
L+ + GH+ + C++ S D +I + S DK+IK+W G + H ++ V++
Sbjct: 567 LS-LYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIP 625
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ +S S D +K W+ + Q + H EV+++ G+ SG D+ +R++
Sbjct: 626 STHHFISASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIF 684
Score = 139 (54.0 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 42/161 (26%), Positives = 75/161 (46%)
Query: 210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
V+++K+S + + LA D TV+ + T GHK V+C+ S DS +++G
Sbjct: 534 VLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMCLDISDDSTLIITGSA 593
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS 329
+ I W G + H I +S+ P +H F S+ KD I+ WD
Sbjct: 594 DKNIKIWGLDYG-DCHKSFFAHDDSIMQVSFIP-STHH----FISASKDKRIKYWDADKF 647
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASD 369
+ ++ + +H V + G G + S S DR+I+++ ++
Sbjct: 648 EHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFNQTE 688
Score = 136 (52.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 56/238 (23%), Positives = 102/238 (42%)
Query: 93 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTP 152
VF++ R +S+ H +V S+ +P+ R + SG D V+FWD + E +
Sbjct: 461 VFELASAAR-VASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWDFEL---IASQENSK 516
Query: 153 YLFYVNETEITKTL---ADVLPL--DTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHA 207
+ V +TKTL +DVL L N V ++ +F V + S+ GH
Sbjct: 517 HK--VLNLSLTKTLKVESDVLALKYSADNKFLAVSLLDNTVKIFYTDTV-KFHLSLYGHK 573
Query: 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG 267
V+ + S + + +GS D ++ W + H ++ +++ P + +S
Sbjct: 574 LPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISA 633
Query: 268 CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
K+ I WD+ + I Q + H + +L+ + F S D +IRI++
Sbjct: 634 SKDKRIKYWDADKFEHI-QTIEAHHGEVWSLA-----MGSVGDFFISGSHDRSIRIFN 685
Score = 136 (52.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 75/327 (22%), Positives = 132/327 (40%)
Query: 79 NTEEVVDIVYQKQA--VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRF 136
N+ E +I ++Q F+V T GH + S+ S N + L S S ++ V+
Sbjct: 367 NSLEAYEIKEKEQGGGAFEVSS----TLDQAGHRSDIRSLSLSSNDQMLVSTSSES-VKV 421
Query: 137 WDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPV 196
W++ + C + L V L+ +V VF++
Sbjct: 422 WNMKS----LSC--------IRSIACDYGLCTVFAPGNLHV--IVGTKTGTIEVFELASA 467
Query: 197 TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD---VTTQT---------PLFK 244
R +S+ H +V S+ +P+ R + SG D V+FWD + +Q L K
Sbjct: 468 AR-VASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWDFELIASQENSKHKVLNLSLTK 526
Query: 245 CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH 304
+ VL + +S D+K L + + + + T K + GHK + L
Sbjct: 527 TLKVESDVLALKYSADNKFLAVSLLDNTVKIFYTDTVK-FHLSLYGHKLPVMCLD----- 580
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIK 363
++ + D I+IW + C + +H S+ + + S + SAS+D+ IK
Sbjct: 581 ISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASKDKRIK 640
Query: 364 VWRASDGVMCRTLEGHAHWVNTLALST 390
W A +T+E H V +LA+ +
Sbjct: 641 YWDADKFEHIQTIEAHHGEVWSLAMGS 667
Score = 135 (52.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 37/145 (25%), Positives = 71/145 (48%)
Query: 429 GEKLVSGSDDFTLFLWNPEKE--KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
G+ ++G + + +W+ K+ +SL ++ N V S DG ++AS D SI++
Sbjct: 28 GKLAITGCGE-RISIWDLRKQVLNQSLYEEDIKAEVTN-VCLSKDGALLASGYSDGSIRI 85
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
W + GH +V + ++ +LVSGS D+ + VW++ T+ L GH D+
Sbjct: 86 WSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQ 145
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
+ +V + + KD +++W
Sbjct: 146 ITSVKLLERSNHLITSSKDGFIKIW 170
Score = 135 (52.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 83/412 (20%), Positives = 166/412 (40%)
Query: 110 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADV 169
AE+V V+F P + LA S V + +T + K E + + + KT + V
Sbjct: 287 AESVSGVRFDPTNKILAVQSTGKFVDLFKITHYDTM-KLEEISIVEEMRHRQTIKTSSKV 345
Query: 170 LPLDTLN-----TEEVVDIVYQKQAVFQVRPVTR--------CTSSMPGHAEAVISVKFS 216
N + V+ + ++++ + T GH + S+ S
Sbjct: 346 RFFSFGNDIKHWNKFVITLAGNSLEAYEIKEKEQGGGAFEVSSTLDQAGHRSDIRSLSLS 405
Query: 217 PNGRSLASGSGDTTVRFWDVTTQTPL--FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH 274
N + L S S ++ V+ W++ + + + C+ + LC ++P + ++ G K G I
Sbjct: 406 SNDQMLVSTSSES-VKVWNMKSLSCIRSIACD----YGLCTVFAPGNLHVIVGTKTGTIE 460
Query: 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD--VILSQ-- 330
++ ++ ++ ++ H+ + +L P R S G D ++ WD +I SQ
Sbjct: 461 VFELASAARVAS-IKAHEGSVWSLVLTP-----DLRGVTSGGADKLVKFWDFELIASQEN 514
Query: 331 -CVRVLT-SHTRS------VTCIRWGGSGLIYSASQ-DRTIKVWRASDGVMCRTLEGHAH 381
+VL S T++ V +++ + S D T+K++ +L GH
Sbjct: 515 SKHKVLNLSLTKTLKVESDVLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKL 574
Query: 382 WVNTLALSTDYLMRVEATSTGGFKY---DPANPEESS-KHALAKYQAQ-CPEGEKLVSGS 436
V L +S D + + ++ K D + +S H + Q P +S S
Sbjct: 575 PVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISAS 634
Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
D + W+ +K + + + H + + G S S D+SI++++
Sbjct: 635 KDKRIKYWDADKFEH-IQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFN 685
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 33/118 (27%), Positives = 59/118 (50%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G LVSGS D + +W+ E L R+ GH+ I V+ + ++S D IK+WD
Sbjct: 113 GNILVSGSKDTEVIVWDIITES-GLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWD 171
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
I T+ GH ++ + + D L S ++D+ ++ W + + + +++ G G E
Sbjct: 172 TETQHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFWRIPSNERQRE-DGSGIE 228
Score = 123 (48.4 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 41/165 (24%), Positives = 74/165 (44%)
Query: 113 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT-KTLADVLP 171
V +V S +G LASG D ++R W ++ ++ + + T +T L ++L
Sbjct: 62 VTNVCLSKDGALLASGYSDGSIRIWSMSD----YQLQAVFNGHRGSVTTMTFNRLGNILV 117
Query: 172 LDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTV 231
+ +TE +V + + +F++R GH + + SVK L + S D +
Sbjct: 118 SGSKDTEVIVWDIITESGLFRLR----------GHRDQITSVKLLERSNHLITSSKDGFI 167
Query: 232 RFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
+ WD TQ + GH++ + I +PD +L S + I W
Sbjct: 168 KIWDTETQHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFW 212
Score = 113 (44.8 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 33/129 (25%), Positives = 58/129 (44%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH +V ++ F+ G L SGS DT V WD+ T++ LF+ G + ++ K L
Sbjct: 99 GHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRG-----HRDQITSVKLLE 153
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
L T + + + I + + C ++ GH + + +P+ L S +
Sbjct: 154 RSNHLITSSKDGFIKI-WDTET-------QHCIQTIVGHRNPIWGIDVNPDETRLCSCTS 205
Query: 228 DTTVRFWDV 236
D +RFW +
Sbjct: 206 DNQIRFWRI 214
Score = 112 (44.5 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 29/99 (29%), Positives = 46/99 (46%)
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491
+++GS D + +W + + H I V F P SAS DK IK WD
Sbjct: 588 IITGSADKNIKIWGLDYGDCHKS-FFAHDDSIMQVSFIPSTHHFISASKDKRIKYWDADK 646
Query: 492 GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
+ I T+ H V+ +A S +SGS D +++++N
Sbjct: 647 FEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFN 685
Score = 72 (30.4 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 33/144 (22%), Positives = 54/144 (37%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV-TTQTPLFKCEGTPYLFYVNET 160
C ++ GH + + +P+ L S + D +RFW + + + G F VN T
Sbjct: 177 CIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFWRIPSNERQREDGSGIEPKFIVN-T 235
Query: 161 EITKT--LADVLPLD-----TLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISV 213
I + D + D N DI + + S+ AE+V V
Sbjct: 236 PINSAVIIPDEINEDGSKKENSNNSNNNDI--DDLEIISEEEFAKYYGSITVKAESVSGV 293
Query: 214 KFSPNGRSLASGSGDTTVRFWDVT 237
+F P + LA S V + +T
Sbjct: 294 RFDPTNKILAVQSTGKFVDLFKIT 317
Score = 44 (20.5 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 34/137 (24%), Positives = 54/137 (39%)
Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496
DD + + E+ K +T + ++ V F P +I+A S K + L+ +I + T
Sbjct: 266 DDLEII--SEEEFAKYYGSITVKAESVSGVRFDPTNKILAVQSTGKFVDLF--KITHYDT 321
Query: 497 TLRGHVQAV------YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
+ V + SS R G+ D +K WN K L G+ E Y +
Sbjct: 322 MKLEEISIVEEMRHRQTIKTSSKVRFFSFGN-D--IKHWN----KFVITLAGNSLEAYEI 374
Query: 551 DWAPDGEKVASGGKDKV 567
EK GG +V
Sbjct: 375 K-----EKEQGGGAFEV 386
Score = 41 (19.5 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 396 VEATSTGGFKYDPAN 410
V+A S G ++DP N
Sbjct: 285 VKAESVSGVRFDPTN 299
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 239 (89.2 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 83/313 (26%), Positives = 144/313 (46%)
Query: 247 GHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWDSSTGKQI--GQPMR---GHKQWITALSW 300
GH WV IA +P D ++S ++ + W + + G P + GH +I+ +
Sbjct: 13 GHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVV- 71
Query: 301 EPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQ 358
L+ +A SG D +R+WD+ + R HT+ V + + I S S+
Sbjct: 72 ----LSSD-GNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSR 126
Query: 359 DRTIKVWRASDGVMCR-TLE--GHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANP 411
D+TIK+W C+ T++ GH WV+ + S ++ + S G + ++ AN
Sbjct: 127 DKTIKLWNTL--AECKFTIQEDGHTDWVSCVRFSPNHSNPI-IVSCGWDRTVKVWNLANC 183
Query: 412 E-ESSKHALAKYQ---AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE 467
+ +++ H Y P+G SG D LW+ + K+L + H +IN +
Sbjct: 184 KLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLN-DGKNLYTLE-HNDIINALC 241
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA---------VYMVAWSSDSRLLV 518
FSP+ R ++ SIK+WD K + LR V + +AWS+D + L
Sbjct: 242 FSPN-RYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLF 300
Query: 519 SGSADSTLKVWNM 531
+G +D+T++VW +
Sbjct: 301 AGYSDNTIRVWQV 313
Score = 221 (82.9 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 51/152 (33%), Positives = 84/152 (55%)
Query: 430 EKLVSGSDDFTLFLWNPEKEKKS-----LARMTGHQQLINCVEFSPDGRIIASASFDKSI 484
+ ++S S D TL +W +++ + R+ GH I+ V S DG S S+D+++
Sbjct: 29 DTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQTL 88
Query: 485 KLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK---KIEQDLP 541
+LWD GK GH + V VA+S+D+R +VSGS D T+K+WN + I++D
Sbjct: 89 RLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQED-- 146
Query: 542 GHGDEVYAVDWAPDGEK--VASGGKDKVLRLW 571
GH D V V ++P+ + S G D+ +++W
Sbjct: 147 GHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVW 178
Score = 213 (80.0 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 68/255 (26%), Positives = 108/255 (42%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH+ + V S +G SGS D T+R WD+ + EGH VL +A+S D++Q+
Sbjct: 62 GHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQI 121
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
VSG ++ I W++ + GH W++ + + P NH S G D +++W
Sbjct: 122 VSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSP---NHSNPIIVSCGWDRTVKVW 178
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
++ + H + + G L S +D +W +DG TLE H +
Sbjct: 179 NLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDII 237
Query: 384 NTLALSTDYLMRVEATSTGGFKYDPA--------NPEESSKHALAKYQAQC------PEG 429
N L S + A +D A PE S + A Q QC +G
Sbjct: 238 NALCFSPNRYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKAD-QPQCLSLAWSTDG 296
Query: 430 EKLVSGSDDFTLFLW 444
+ L +G D T+ +W
Sbjct: 297 QTLFAGYSDNTIRVW 311
Score = 212 (79.7 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 56/147 (38%), Positives = 76/147 (51%)
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
+G +SGS D TL LW+ K + R GH + + V FS D R I S S DK+IKLW
Sbjct: 75 DGNYALSGSWDQTLRLWDLAAGKTT-RRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLW 133
Query: 488 DGRIG-KFITTLRGHVQAVYMVAWSSD--SRLLVSGSADSTLKVWNMKTKKIEQDLPGHG 544
+ KF GH V V +S + + ++VS D T+KVWN+ K++ + GH
Sbjct: 134 NTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHN 193
Query: 545 DEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ V +PDG SGGKD LW
Sbjct: 194 GYLNTVTVSPDGSLCTSGGKDSKALLW 220
Score = 204 (76.9 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 64/216 (29%), Positives = 104/216 (48%)
Query: 353 IYSASQDRTIKVW---RASD---GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK- 405
I SAS+D+T+ VW R D G + L GH+H+++ + LS+D + + +
Sbjct: 31 IISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQTLRL 90
Query: 406 YDPANPEESSK---HALAKYQ-AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
+D A + + + H A + ++VSGS D T+ LWN E K + GH
Sbjct: 91 WDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTD 150
Query: 462 LINCVEFSPD--GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVS 519
++CV FSP+ II S +D+++K+W+ K GH + V S D L S
Sbjct: 151 WVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTS 210
Query: 520 GSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPD 555
G DS +W++ K L H D + A+ ++P+
Sbjct: 211 GGKDSKALLWDLNDGKNLYTLE-HNDIINALCFSPN 245
Score = 183 (69.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 51/199 (25%), Positives = 94/199 (47%)
Query: 205 GHAEAVISVKFSPNGR-SLASGSGDTTVRFWDVTTQT------PLFKCEGHKHWVLCIAW 257
GH V + +P ++ S S D T+ W +T P + GH H++ +
Sbjct: 13 GHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVL 72
Query: 258 SPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK 317
S D +SG + + WD + GK + GH + + +++ F ++ R+ S +
Sbjct: 73 SSDGNYALSGSWDQTLRLWDLAAGKTTRR-FEGHTKDVLSVA---FSADN--RQIVSGSR 126
Query: 318 DGAIRIWDVILSQCVRVLTS--HTRSVTCIRWG---GSGLIYSASQDRTIKVWRASDGVM 372
D I++W+ L++C + HT V+C+R+ + +I S DRT+KVW ++ +
Sbjct: 127 DKTIKLWNT-LAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKL 185
Query: 373 CRTLEGHAHWVNTLALSTD 391
GH ++NT+ +S D
Sbjct: 186 KNNHHGHNGYLNTVTVSPD 204
Score = 162 (62.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 71/270 (26%), Positives = 109/270 (40%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH+ + V S +G SGS D T+R WD+ + EG TK
Sbjct: 62 GHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGH-----------TK--- 107
Query: 168 DVLPLD-TLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS--LA 223
DVL + + + ++V K ++ + T GH + V V+FSPN + +
Sbjct: 108 DVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIV 167
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S D TV+ W++ GH ++ + SPD SG K+ WD + GK
Sbjct: 168 SCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKN 227
Query: 284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK--DGAIRIWDVILSQCVRVLTSHTRS 341
+ + H I AL + P + C + S K D A + L V TS
Sbjct: 228 L-YTLE-HNDIINALCFSP-NRYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQ 284
Query: 342 VTCIR--WGGSG-LIYSASQDRTIKVWRAS 368
C+ W G +++ D TI+VW+ S
Sbjct: 285 PQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 314
Score = 152 (58.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 64/273 (23%), Positives = 105/273 (38%)
Query: 283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV------LT 336
Q+ + GH W+T ++ P + S+ +D + +W + + L
Sbjct: 6 QLRGTLIGHNGWVTQIATNPKDPD----TIISASRDKTLIVWKLTRDEDTNYGYPQKRLY 61
Query: 337 SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMR 395
H+ ++ + G S S D+T+++W + G R EGH V ++A S D
Sbjct: 62 GHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQI 121
Query: 396 VEATSTGGFKYDPANPE-----ESSKHA-LAKYQAQCPEGEK--LVSGSDDFTLFLWNPE 447
V + K E + H P +VS D T+ +WN
Sbjct: 122 VSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLA 181
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
K GH +N V SPDG + S D LWD GK + TL H +
Sbjct: 182 NCKLK-NNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINA 239
Query: 508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL 540
+ +S + L S +K+W++ KK ++L
Sbjct: 240 LCFSPNRYWLCVAYGPS-IKIWDLACKKTVEEL 271
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 57/242 (23%), Positives = 99/242 (40%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
+ T GH + V+SV FS + R + SGS D T++ W+ L +C+ F + E
Sbjct: 97 KTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNT-----LAECK-----FTIQED 146
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT--SSMPGHAEAVISVKFSPN 218
T ++ V + +V + + +V + C ++ GH + +V SP+
Sbjct: 147 GHTDWVSCVRFSPNHSNPIIVSCGWDRTV--KVWNLANCKLKNNHHGHNGYLNTVTVSPD 204
Query: 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGH-----------KHWVLCIAWSPDSKQLVSG 267
G SG D+ WD+ L+ E + ++W LC+A+ P K
Sbjct: 205 GSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINALCFSPNRYW-LCVAYGPSIKIWDLA 263
Query: 268 CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI 327
CK V + + + + + +L+W + Q FA D IR+W V
Sbjct: 264 CKKTV----EELRPEVVSPTSKADQPQCLSLAWST---DGQTL-FAGYS-DNTIRVWQVS 314
Query: 328 LS 329
+S
Sbjct: 315 VS 316
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 239 (89.2 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 72/253 (28%), Positives = 124/253 (49%)
Query: 337 SHTRSVTCIRWG-----GSGLIYSASQDRTIKVWRASDGVMCR--TLEGH---------A 380
+H ++ + WG GS + S S D +KVW+ +D + TLEGH +
Sbjct: 14 AHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDIS 73
Query: 381 HWVNTLALST-DYLMRVEATSTGG-FKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD 438
H + A S+ D +R+ TG K A P ++ A + P+ + L +GS
Sbjct: 74 HTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFS------PDSQFLATGSHV 127
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL 498
+ ++ E KK + T + +++ + +SPDG+ +AS + D I ++D GK + TL
Sbjct: 128 GKVNIFGVETGKKEYSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTL 186
Query: 499 RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK 558
GH + + +S DS+LLV+ S D +K+++++ + L GHG V V + PD
Sbjct: 187 EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTH 246
Query: 559 VASGGKDKVLRLW 571
S DK +++W
Sbjct: 247 FVSSSSDKSVKVW 259
Score = 235 (87.8 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 72/262 (27%), Positives = 117/262 (44%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH V+SV S G AS S D +R WD+ T + + P +
Sbjct: 59 TLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAW-------- 110
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
+LA L T V K +F V + S+ + ++S+ +SP+G+ LAS
Sbjct: 111 SLAFSPDSQFLATGSHVG----KVNIFGVETGKK-EYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
G+ D + +D+ T L EGH + + +SPDS+ LV+ +G I +D
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA 225
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
G + GH W+ +++ P H F SS D ++++WD CV H V
Sbjct: 226 GT-LSGHGSWVLNVAFCPDD-TH----FVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWG 279
Query: 345 IRWGGSGL-IYSASQDRTIKVW 365
+++ GSG I S D+ I ++
Sbjct: 280 VKYNGSGSKIVSVGDDQEIHIY 301
Score = 170 (64.9 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 65/308 (21%), Positives = 131/308 (42%)
Query: 236 VTTQTP-LFKCE-GHKHWVLCIAWSPDSKQ----LVSGCKNGVIHAWDSSTGK-QIGQPM 288
+TTQ LFK E H + +AW + K ++SG + ++ W + K + +
Sbjct: 1 MTTQYGILFKQEQAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTL 60
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
GH+ + ++ ++H ASS D IR+WD+ + ++ + + + +
Sbjct: 61 EGHQLGVVSVD-----ISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFS 115
Query: 349 -GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-Y 406
S + + S + ++ G +L+ ++ ++A S D G +
Sbjct: 116 PDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 407 DPANPE---ESSKHALA-KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL 462
D A + HA+ + P+ + LV+ SDD + +++ + + ++GH
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA-GTLSGHGSW 234
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
+ V F PD S+S DKS+K+WD + T H V+ V ++ +VS
Sbjct: 235 VLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGD 294
Query: 523 DSTLKVWN 530
D + +++
Sbjct: 295 DQEIHIYD 302
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 33/124 (26%), Positives = 55/124 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GHA + S+ FSP+ + L + S D ++ +DV GH WVL +A+ PD
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDD 244
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
VS + + WD+ T + H+ + + + N + S G D I
Sbjct: 245 THFVSSSSDKSVKVWDAGTRTCV-HTFFDHQDQVWGVKY-----NGSGSKIVSVGDDQEI 298
Query: 322 RIWD 325
I+D
Sbjct: 299 HIYD 302
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 239 (89.2 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 72/253 (28%), Positives = 124/253 (49%)
Query: 337 SHTRSVTCIRWG-----GSGLIYSASQDRTIKVWRASDGVMCR--TLEGH---------A 380
+H ++ + WG GS + S S D +KVW+ +D + TLEGH +
Sbjct: 14 AHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDIS 73
Query: 381 HWVNTLALST-DYLMRVEATSTGG-FKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD 438
H + A S+ D +R+ TG K A P ++ A + P+ + L +GS
Sbjct: 74 HTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFS------PDSQFLATGSHV 127
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL 498
+ ++ E KK + T + +++ + +SPDG+ +AS + D I ++D GK + TL
Sbjct: 128 GKVNIFGVETGKKEYSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTL 186
Query: 499 RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK 558
GH + + +S DS+LLV+ S D +K+++++ + L GHG V V + PD
Sbjct: 187 EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTH 246
Query: 559 VASGGKDKVLRLW 571
S DK +++W
Sbjct: 247 FVSSSSDKSVKVW 259
Score = 235 (87.8 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 72/262 (27%), Positives = 117/262 (44%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH V+SV S G AS S D +R WD+ T + + P +
Sbjct: 59 TLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAW-------- 110
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
+LA L T V K +F V + S+ + ++S+ +SP+G+ LAS
Sbjct: 111 SLAFSPDSQFLATGSHVG----KVNIFGVETGKK-EYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
G+ D + +D+ T L EGH + + +SPDS+ LV+ +G I +D
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA 225
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
G + GH W+ +++ P H F SS D ++++WD CV H V
Sbjct: 226 GT-LSGHGSWVLNVAFCPDD-TH----FVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWG 279
Query: 345 IRWGGSGL-IYSASQDRTIKVW 365
+++ GSG I S D+ I ++
Sbjct: 280 VKYNGSGSKIVSVGDDQEIHIY 301
Score = 170 (64.9 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 65/308 (21%), Positives = 131/308 (42%)
Query: 236 VTTQTP-LFKCE-GHKHWVLCIAWSPDSKQ----LVSGCKNGVIHAWDSSTGK-QIGQPM 288
+TTQ LFK E H + +AW + K ++SG + ++ W + K + +
Sbjct: 1 MTTQYGILFKQEQAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTL 60
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
GH+ + ++ ++H ASS D IR+WD+ + ++ + + + +
Sbjct: 61 EGHQLGVVSVD-----ISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFS 115
Query: 349 -GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-Y 406
S + + S + ++ G +L+ ++ ++A S D G +
Sbjct: 116 PDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 407 DPANPE---ESSKHALA-KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL 462
D A + HA+ + P+ + LV+ SDD + +++ + + ++GH
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA-GTLSGHGSW 234
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
+ V F PD S+S DKS+K+WD + T H V+ V ++ +VS
Sbjct: 235 VLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGD 294
Query: 523 DSTLKVWN 530
D + +++
Sbjct: 295 DQEIHIYD 302
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 33/124 (26%), Positives = 55/124 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GHA + S+ FSP+ + L + S D ++ +DV GH WVL +A+ PD
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDD 244
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
VS + + WD+ T + H+ + + + N + S G D I
Sbjct: 245 THFVSSSSDKSVKVWDAGTRTCV-HTFFDHQDQVWGVKY-----NGSGSKIVSVGDDQEI 298
Query: 322 RIWD 325
I+D
Sbjct: 299 HIYD 302
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 236 (88.1 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 52/145 (35%), Positives = 77/145 (53%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P G + S D T LW L TGH N V F P+ +A+ S DKS +L
Sbjct: 731 PFGFYFATASHDRTARLWTTN-HISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARL 789
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
W+ + GK + GH +Y VA+S D RLL + D+++ +W++ T K + + GH
Sbjct: 790 WEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKC 849
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
VY++D++ DG +ASG D +RLW
Sbjct: 850 VYSLDFSCDGSILASGSSDCTVRLW 874
Score = 197 (74.4 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 41/106 (38%), Positives = 63/106 (59%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P L +GS+D + LW + K + GH+ I V FSPDGR++A+A D S+ L
Sbjct: 773 PNINYLATGSNDKSARLWEIQTGK-CVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVIL 831
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
WD GK + + GH + VY + +S D +L SGS+D T+++W++K
Sbjct: 832 WDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVK 877
Score = 197 (74.4 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 51/191 (26%), Positives = 88/191 (46%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH+ V FSP+ + L S S DTT R W + T + L +GH V +++SP
Sbjct: 677 GHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYF 736
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMR---GHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+ + W T I P+R GH + + P ++N+ A+ D +
Sbjct: 737 ATASHDRTARLW---TTNHIS-PLRIFTGHLSDCNTVRFHP-NINY----LATGSNDKSA 787
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
R+W++ +CVR+ H + + + G L+ +A +D ++ +W S G + ++GH
Sbjct: 788 RLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHT 847
Query: 381 HWVNTLALSTD 391
V +L S D
Sbjct: 848 KCVYSLDFSCD 858
Score = 194 (73.4 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 45/145 (31%), Positives = 74/145 (51%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+ + L+S S+D T LW+ E +L GH + V FSP G A+AS D++ +L
Sbjct: 689 PDSQYLLSCSEDTTARLWSMET-MSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARL 747
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
W + GH+ V + + L +GS D + ++W ++T K + GH
Sbjct: 748 WTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAP 807
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
+Y V ++PDG +A+ G+D + LW
Sbjct: 808 IYTVAFSPDGRLLATAGEDTSVILW 832
Score = 176 (67.0 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 45/162 (27%), Positives = 77/162 (47%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH V V FSP G A+ S D T R W +PL GH + + P+ L
Sbjct: 719 GHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYL 778
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
+G + W+ TGK + + GH+ I +++ P R A++G+D ++ +W
Sbjct: 779 ATGSNDKSARLWEIQTGKCV-RIFMGHRAPIYTVAFSP-----DGRLLATAGEDTSVILW 832
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
D+ + V+ + HT+ V + + G ++ S S D T+++W
Sbjct: 833 DLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLW 874
Score = 167 (63.8 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 39/122 (31%), Positives = 64/122 (52%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH +V+F PN LA+GS D + R W++ T + GH+ + +A+SPD + L
Sbjct: 761 GHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLL 820
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
+ ++ + WD STGK++ + M GH + + +L F + AS D +R+W
Sbjct: 821 ATAGEDTSVILWDLSTGKKV-KKMDGHTKCVYSLD---FSCDGSI--LASGSSDCTVRLW 874
Query: 325 DV 326
DV
Sbjct: 875 DV 876
Score = 167 (63.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 47/170 (27%), Positives = 78/170 (45%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH V V FSP G A+ S D T R W +PL G ++++ +
Sbjct: 719 GHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTG-----HLSDCNTVRFHP 773
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
++ L T + ++ +++++ +C GH + +V FSP+GR LA+
Sbjct: 774 NINYLATGSNDK-------SARLWEIQ-TGKCVRIFMGHRAPIYTVAFSPDGRLLATAGE 825
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
DT+V WD++T + K +GH V + +S D L SG + + WD
Sbjct: 826 DTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWD 875
Score = 136 (52.9 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 38/141 (26%), Positives = 61/141 (43%)
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491
L SGS + L +KE + GH + FSPD + + S S D + +LW
Sbjct: 652 LNSGSSSSSNKLQKQQKESE-FKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMET 710
Query: 492 GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVD 551
+ +GH V+ V++S + S D T ++W + GH + V
Sbjct: 711 MSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVR 770
Query: 552 WAPDGEKVASGGKDKVLRLWQ 572
+ P+ +A+G DK RLW+
Sbjct: 771 FHPNINYLATGSNDKSARLWE 791
Score = 131 (51.2 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 46/132 (34%), Positives = 63/132 (47%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH +V+F PN LA+GS D + R W++ T KC +F + I T+A
Sbjct: 761 GHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTG----KCVR---IFMGHRAPIY-TVA 812
Query: 168 ---DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
D L T + V I++ +V+ M GH + V S+ FS +G LAS
Sbjct: 813 FSPDGRLLATAGEDTSV-ILWDLSTGKKVK-------KMDGHTKCVYSLDFSCDGSILAS 864
Query: 225 GSGDTTVRFWDV 236
GS D TVR WDV
Sbjct: 865 GSSDCTVRLWDV 876
Score = 78 (32.5 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG 150
GH+ V FSP+ + L S S DTT R W + T + L +G
Sbjct: 677 GHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKG 719
Score = 43 (20.2 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 26/122 (21%), Positives = 39/122 (31%)
Query: 125 LASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV 184
+ S S + TT T TP T +++ P T T ++
Sbjct: 44 VGSSSANAVTSTPSPTTTTSTAPSTPTPTPTPTPNPNTTSSISTSTPTPTTTTTTILTPP 103
Query: 185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS-----GSGDTTVRFWDVTTQ 239
+ + V S++P A IS S N +L + TT TT
Sbjct: 104 LPQNTTTPITAVPSSASAIPITATTTISPNTSSNITALPTTPTTPNITPTTTAATTTTTT 163
Query: 240 TP 241
TP
Sbjct: 164 TP 165
Score = 39 (18.8 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 119 SPNGRSLASGSGDTTVRFWDV 139
S + + +A G D++V+ W++
Sbjct: 567 SKDAQLVAGGFSDSSVKIWNL 587
Score = 39 (18.8 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 216 SPNGRSLASGSGDTTVRFWDV 236
S + + +A G D++V+ W++
Sbjct: 567 SKDAQLVAGGFSDSSVKIWNL 587
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 246 (91.7 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 83/297 (27%), Positives = 132/297 (44%)
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFHL 305
GH + + W DS+ LVS ++G + WDS +T K P+R W+ ++ P
Sbjct: 53 GHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRS--SWVMTCAYAPSG- 109
Query: 306 NHQCRRFASSGKDGAIRIWDVILSQC-VRV---LTSHTRSVTCIRWGGSGLIYSASQDRT 361
N+ A G D I+++ + VRV L HT ++C R+ G I ++S D T
Sbjct: 110 NY----VACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSGDTT 165
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANP--EESSKHA 418
+W G T GH+ V +L+LS D V K +D + +S
Sbjct: 166 CALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGH 225
Query: 419 LAKYQAQC--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI---NCVEFSPDGR 473
++ A P G +GSDD T L++ +++ L + H +I V FS GR
Sbjct: 226 ISDINAVSFFPSGYAFATGSDDATCRLFDLRADQELL--LYSHDNIICGITSVAFSKSGR 283
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
++ + D + +WD G L GH V + + D + +GS DS L++WN
Sbjct: 284 LLLAGYDDFNCSVWDALKGGRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 206 (77.6 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 71/325 (21%), Positives = 137/325 (42%)
Query: 176 NTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 235
N +V I +V +++ TR T + GH + ++ + + R L S S D + WD
Sbjct: 26 NDATLVQITSNMDSVGRIQMRTRRT--LRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWD 83
Query: 236 VTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK---QIGQPMRGHK 292
T + WV+ A++P + G + + ++ T + ++ + + GH
Sbjct: 84 SYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHT 143
Query: 293 QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL 352
+++ F + Q SSG D +WD+ Q T H+ V +
Sbjct: 144 GYLSCCR---FLDDGQI--ITSSG-DTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLK 197
Query: 353 IY-SASQDRTIKVWRASDGVMCR-TLEGHAHWVNTLAL-STDYLMRVEATSTGGFKYDPA 409
+ S + D + K+W DG MCR + GH +N ++ + Y + +D
Sbjct: 198 TFVSGACDASSKLWDIRDG-MCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLR 256
Query: 410 NPEE----SSKHALAKYQ--AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
+E S + + A G L++G DDF +W+ K ++ + GH +
Sbjct: 257 ADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRA-GVLAGHDNRV 315
Query: 464 NCVEFSPDGRIIASASFDKSIKLWD 488
+C+ + DG +A+ S+D +++W+
Sbjct: 316 SCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 202 (76.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 57/208 (27%), Positives = 95/208 (45%)
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHAL---AKYQAQC--- 426
RTL GH + + D + V A+ G +D + HA+ + + C
Sbjct: 49 RTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKM--HAIPLRSSWVMTCAYA 106
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLA---RMTGHQQLINCVEFSPDGRIIASASFDKS 483
P G + G D ++N + + ++ + GH ++C F DG+II S+ D +
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTT 165
Query: 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
LWD G+ TT GH V ++ S D + VSG+ D++ K+W+++ Q GH
Sbjct: 166 CALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGH 225
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++ AV + P G A+G D RL+
Sbjct: 226 ISDINAVSFFPSGYAFATGSDDATCRLF 253
Score = 202 (76.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 90/331 (27%), Positives = 135/331 (40%)
Query: 79 NTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 138
N +V I +V +++ TR T + GH + ++ + + R L S S D + WD
Sbjct: 26 NDATLVQITSNMDSVGRIQMRTRRT--LRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWD 83
Query: 139 VTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTR 198
T K P T + + L + + I K VR V+R
Sbjct: 84 SYTTN---KMHAIPLRSSWVMTCAYAPSGNYVACGGL--DNICSIYNLKTREGNVR-VSR 137
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGHKHWVLCIA 256
+PGH + +F +G+ + S SGDTT WD+ T QT F GH V+ ++
Sbjct: 138 ---ELPGHTGYLSCCRFLDDGQIITS-SGDTTCALWDIETGQQTTTFT--GHSGDVMSLS 191
Query: 257 WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
SPD K VSG + WD G Q GH I A+S+ P FA+
Sbjct: 192 LSPDLKTFVSGACDASSKLWDIRDG-MCRQSFTGHISDINAVSFFPSGY-----AFATGS 245
Query: 317 KDGAIRIWDVILSQCVRVLTSHTR--SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMC 373
D R++D+ Q + + + +T + + SG L+ + D VW A G
Sbjct: 246 DDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRA 305
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGF 404
L GH + V+ L + TD M V S F
Sbjct: 306 GVLAGHDNRVSCLGV-TDDGMAVATGSWDSF 335
Score = 195 (73.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 73/296 (24%), Positives = 124/296 (41%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+RGH I A+ W + R S+ +DG + IWD + + + + V +
Sbjct: 51 LRGHLAKIYAMHW-----GYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAY 105
Query: 348 GGSG-LIYSASQDRTIKVW--RASDGVM--CRTLEGHAHWVNTLALSTDYLMRVEATSTG 402
SG + D ++ + +G + R L GH +++ D + + T
Sbjct: 106 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSGDTT 165
Query: 403 GFKYDPANPEESSK---HALAKYQAQC-PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG 458
+D ++++ H+ P+ + VSG+ D + LW+ ++ TG
Sbjct: 166 CALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDI-RDGMCRQSFTG 224
Query: 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH---VQAVYMVAWSSDSR 515
H IN V F P G A+ S D + +L+D R + + L H + + VA+S R
Sbjct: 225 HISDINAVSFFPSGYAFATGSDDATCRLFDLRADQELL-LYSHDNIICGITSVAFSKSGR 283
Query: 516 LLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
LL++G D VW+ L GH + V + DG VA+G D LR+W
Sbjct: 284 LLLAGYDDFNCSVWDALKGGRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 246 (91.7 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 76/301 (25%), Positives = 137/301 (45%)
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEP--- 302
GH + + W+ DSK LVS ++G + WD+ +T K P+R W+ ++ P
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRS--SWVMTCAYAPSGN 110
Query: 303 F----HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ 358
F L++ C ++ ++G +++ R L++HT ++C R+ I ++S
Sbjct: 111 FVACGGLDNMCSIYSLKSREGNVKV--------SRELSAHTGYLSCCRFLDDNNIVTSSG 162
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418
D T +W G GH +LA+S DY + + K E + +
Sbjct: 163 DTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVR-EGTCRQT 221
Query: 419 LAKYQAQ----C--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI---NCVEFS 469
+++ C P GE + +GSDD + L++ +++ A H+ +I V FS
Sbjct: 222 FTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAY--SHESIICGITSVAFS 279
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
GR++ + D + +WD + + L GH V + ++D + +GS DS LK+W
Sbjct: 280 LSGRLLFAGYDDFNCNVWDSLKCERVGVLSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Query: 530 N 530
N
Sbjct: 340 N 340
Score = 207 (77.9 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 71/298 (23%), Positives = 127/298 (42%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+RGH I A+ W + S+ +DG + +WD + V + + V +
Sbjct: 51 LRGHLAKIYAMHWAT-----DSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAY 105
Query: 348 GGSG-LIYSASQDRTIKVW--RASDG--VMCRTLEGHAHWVNTLALSTDYLMRVEATSTG 402
SG + D ++ ++ +G + R L H +++ D + + T
Sbjct: 106 APSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTT 165
Query: 403 GFKYDPANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
+D ++ K + C P+ + +SG+ D + LW+ +E
Sbjct: 166 CALWDIETGQQ--KTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDV-REGTCRQTF 222
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAWSSDS 514
TGH+ IN + F P+G I + S D S +L+D R + +T + + VA+S
Sbjct: 223 TGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSHESIICGITSVAFSLSG 282
Query: 515 RLLVSGSADSTLKVWN-MKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
RLL +G D VW+ +K +++ L GH + V + DG VA+G D L++W
Sbjct: 283 RLLFAGYDDFNCNVWDSLKCERVGV-LSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Score = 194 (73.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 56/208 (26%), Positives = 98/208 (47%)
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK-HAL---AKYQAQC--- 426
RTL GH + + +TD + V A+ G K + ++K HA+ + + C
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDG--KLIVWDTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 427 PEGEKLVSGSDD--FTLF-LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
P G + G D +++ L + E K ++ H ++C F D I+ S+ D +
Sbjct: 107 PSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTT 165
Query: 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
LWD G+ T GH +A S D +L +SG+ D++ K+W+++ Q GH
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++ A+ + P+GE + +G D RL+
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLF 253
Score = 192 (72.6 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 70/324 (21%), Positives = 135/324 (41%)
Query: 180 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ 239
+ ++V + V +V+ TR T + GH + ++ ++ + + L S S D + WD T
Sbjct: 30 LAELVSGLEVVGRVQMRTRRT--LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTT 87
Query: 240 TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV--IHAWDSSTGK-QIGQPMRGHKQWIT 296
+ WV+ A++P + G + + I++ S G ++ + + H +++
Sbjct: 88 NKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLS 147
Query: 297 ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYS 355
+ L+ SSG D +WD+ Q V HT + L S
Sbjct: 148 CCRF----LDDN-NIVTSSG-DTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFIS 201
Query: 356 ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS 415
+ D + K+W +G +T GH +N + + EA TG + +
Sbjct: 202 GACDASAKLWDVREGTCRQTFTGHESDINAIC----FFPNGEAICTGSDDASCRLFDLRA 257
Query: 416 KHALAKYQAQ---CP--------EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN 464
L Y + C G L +G DDF +W+ K ++ + ++GH ++
Sbjct: 258 DQELTAYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSLKCER-VGVLSGHDNRVS 316
Query: 465 CVEFSPDGRIIASASFDKSIKLWD 488
C+ + DG +A+ S+D +K+W+
Sbjct: 317 CLGVTADGMAVATGSWDSFLKIWN 340
Score = 155 (59.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 73/315 (23%), Positives = 129/315 (40%)
Query: 83 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ 142
+ ++V + V +V+ TR T + GH + ++ ++ + + L S S D + WD T
Sbjct: 30 LAELVSGLEVVGRVQMRTRRT--LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTT 87
Query: 143 TPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS 202
K P T + + L + + I K V+ V+R S+
Sbjct: 88 N---KVHAIPLRSSWVMTCAYAPSGNFVACGGL--DNMCSIYSLKSREGNVK-VSRELSA 141
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
G+ +F + ++ + SGDTT WD+ T GH + +A SPD K
Sbjct: 142 HTGYLSCC---RFLDDN-NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYK 197
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
+SG + WD G Q GH+ I A+ + P N + + D + R
Sbjct: 198 LFISGACDASAKLWDVREGT-CRQTFTGHESDINAICFFP---NGEA--ICTGSDDASCR 251
Query: 323 IWDVILSQCVRVLTSHTR--SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCR---TL 376
++D+ Q + + + +T + + SG L+++ D VW D + C L
Sbjct: 252 LFDLRADQELTAYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVW---DSLKCERVGVL 308
Query: 377 EGHAHWVNTLALSTD 391
GH + V+ L ++ D
Sbjct: 309 SGHDNRVSCLGVTAD 323
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 258 (95.9 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 89/303 (29%), Positives = 132/303 (43%)
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
GQ + +K +T+L W N + A+ DG RIW L H +
Sbjct: 219 GQDVPSNKD-VTSLDW-----NSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFA 271
Query: 345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA------HWV--NTLA-LSTDYLM 394
++W G I SA D+T +W A G + H+ W NT A STD M
Sbjct: 272 LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTD--M 329
Query: 395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
+ G + +++ K+ P G L S SDD TL +W+ K+ +
Sbjct: 330 CIHVCKLGQDRPIKTFQGHTNEVNAIKWD---PTGNLLASCSDDMTLKIWSM-KQDSCVH 385
Query: 455 RMTGHQQLINCVEFSPDGR---------IIAS---ASFDKSIKLWDGRIGKFITTLRGHV 502
+ H + I +++SP G ++AS ASFD +++LWD G I TL H
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQ 445
Query: 503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASG 562
+ VY VA+S D R L SGS D + +WN +T + G G ++ V W G+KV +
Sbjct: 446 EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG-IFEVCWNAAGDKVGAS 504
Query: 563 GKD 565
D
Sbjct: 505 ASD 507
Score = 206 (77.6 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 58/250 (23%), Positives = 111/250 (44%)
Query: 340 RSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST--DYLMRV 396
+ VT + W G L+ + S D ++W DG + TL H + L + ++++
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKGNFILSA 284
Query: 397 EATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSL 453
T +D E + H+ S S D + + +++ +
Sbjct: 285 GVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRP-I 342
Query: 454 ARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS- 512
GH +N +++ P G ++AS S D ++K+W + + L+ H + +Y + WS
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPT 402
Query: 513 -------DSRLLV----SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS 561
++ L++ S S DST+++W++ L H + VY+V ++PDG +AS
Sbjct: 403 GPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLAS 462
Query: 562 GGKDKVLRLW 571
G DK + +W
Sbjct: 463 GSFDKCVHIW 472
Score = 196 (74.1 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 73/303 (24%), Positives = 121/303 (39%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFY---VNET-EIT 163
GH V ++P LASGSGD+T R W+++ + G+ L + E +
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENST----SGSTQLVLRHCIREGGQDV 222
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFSPNGRSL 222
+ DV LD N+E + ++ S++ H + ++K++ G +
Sbjct: 223 PSNKDVTSLDW-NSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV-IHAWDSSTG 281
S D T WD T + H L + W S + C + IH
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--SNNTFASCSTDMCIHVCKLGQD 339
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341
+ I + +GH + A+ W+P AS D ++IW + CV L +H +
Sbjct: 340 RPI-KTFQGHTNEVNAIKWDPTG-----NLLASCSDDMTLKIWSMKQDSCVHDLQAHNKE 393
Query: 342 VTCIRWGGSG---------LIY----SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
+ I+W +G L+ SAS D T+++W G+ TL H V ++A
Sbjct: 394 IYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAF 453
Query: 389 STD 391
S D
Sbjct: 454 SPD 456
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 51/244 (20%), Positives = 96/244 (39%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV-----------ILSQCVRVL- 335
+RGH+ + +W P AS D RIW++ +L C+R
Sbjct: 165 LRGHESEVFICAWNPVS-----DLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGG 219
Query: 336 --TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST-- 390
+ VT + W G L+ + S D ++W DG + TL H + L +
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKG 278
Query: 391 DYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
++++ T +D E + H+ S S D + +
Sbjct: 279 NFILSAGVDKTT-IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLG 337
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+++ + GH +N +++ P G ++AS S D ++K+W + + L+ H + +Y
Sbjct: 338 QDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYT 396
Query: 508 VAWS 511
+ WS
Sbjct: 397 IKWS 400
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 34/139 (24%), Positives = 63/139 (45%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKS-----LAR---MTGHQQL-----INCVEFSPDGR 473
P + L SGS D T +WN + S + R G Q + + ++++ +G
Sbjct: 179 PVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGT 238
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++A+ S+D ++W + G +TL H ++ + W+ ++S D T +W+ T
Sbjct: 239 LLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT 297
Query: 534 KKIEQDLPGHGDEVYAVDW 552
+ +Q P H VDW
Sbjct: 298 GEAKQQFPFHSAPALDVDW 316
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 39/140 (27%), Positives = 63/140 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNG------------RSLASGSGDTTVRFWDVTTQTPLFKCE 246
C + H + + ++K+SP G SL S S D+TVR WDV +
Sbjct: 383 CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLT 442
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLN 306
H+ V +A+SPD + L SG + +H W++ TG + RG I + W N
Sbjct: 443 KHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALV-HSYRG-TGGIFEVCW-----N 495
Query: 307 HQCRRFASSGKDGAIRIWDV 326
+ +S DG++ + D+
Sbjct: 496 AAGDKVGASASDGSVCVLDL 515
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 46/185 (24%), Positives = 77/185 (41%)
Query: 95 QVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYL 154
Q RP+ + GH V ++K+ P G LAS S D T++ W + + + +
Sbjct: 338 QDRPI----KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKE 393
Query: 155 FYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTR--CTSSMPGHAEAVIS 212
Y + T + P L + + + ++ V R C ++ H E V S
Sbjct: 394 IYTIKWSPTGPGTNN-PNANLMLASLDSASFD--STVRLWDVDRGICIHTLTKHQEPVYS 450
Query: 213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV 272
V FSP+GR LASGS D V W+ T + G + + W+ ++ + +G
Sbjct: 451 VAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGS 509
Query: 273 IHAWD 277
+ D
Sbjct: 510 VCVLD 514
Score = 130 (50.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE---------------QDLPG 542
LRGH V++ AW+ S LL SGS DST ++WN+ QD+P
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 543 HGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ D V ++DW +G +A+G D R+W
Sbjct: 225 NKD-VTSLDWNSEGTLLATGSYDGFARIW 252
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 62/284 (21%), Positives = 106/284 (37%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGTPYLFYVNETE 161
S++ H + ++K++ G + S D T WD T F P L + +
Sbjct: 260 STLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDV--DWQ 317
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
T A + +T+ + + + Q RP+ + GH V ++K+ P G
Sbjct: 318 SNNTFA------SCSTDMCIHVC----KLGQDRPI----KTFQGHTNEVNAIKWDPTGNL 363
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK------------QLVSGCK 269
LAS S D T++ W + + + + H + I WSP L S
Sbjct: 364 LASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASF 423
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS 329
+ + WD G I + H++ + ++++ P R AS D + IW+
Sbjct: 424 DSTVRLWDVDRGICI-HTLTKHQEPVYSVAFSP-----DGRYLASGSFDKCVHIWNTQTG 477
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMC 373
V T + + W +G AS ASDG +C
Sbjct: 478 ALVHSYRG-TGGIFEVCWNAAGDKVGAS---------ASDGSVC 511
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 245 (91.3 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 83/297 (27%), Positives = 132/297 (44%)
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFHL 305
GH + + W DS+ LVS ++G + WDS +T K P+R W+ ++ P
Sbjct: 53 GHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRS--SWVMTCAYAPSG- 109
Query: 306 NHQCRRFASSGKDGAIRIWDVILSQC-VRV---LTSHTRSVTCIRWGGSGLIYSASQDRT 361
N+ A G D I+++ + VRV L HT ++C R+ G I ++S D T
Sbjct: 110 NY----VACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSGDTT 165
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANP--EESSKHA 418
+W G T GH+ V +L+LS D V K +D + +S
Sbjct: 166 CALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGH 225
Query: 419 LAKYQAQC--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI---NCVEFSPDGR 473
++ A P G +GSDD T L++ +++ L + H +I V FS GR
Sbjct: 226 ISDINAVSFFPSGYAFATGSDDATCRLFDLRADQELL--LYSHDNIICGITSVAFSKSGR 283
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
++ + D + +WD G L GH V + + D + +GS DS L++WN
Sbjct: 284 LLLAGYDDFNCSVWDALKGGRSGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 209 (78.6 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 72/325 (22%), Positives = 137/325 (42%)
Query: 176 NTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 235
N +V I +V +++ TR T + GH + ++ + + R L S S D + WD
Sbjct: 26 NDATLVQITSNMDSVGRIQMRTRRT--LRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWD 83
Query: 236 VTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK---QIGQPMRGHK 292
T + WV+ A++P + G + + ++ T + ++ + + GH
Sbjct: 84 SYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHT 143
Query: 293 QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL 352
+++ F + Q SSG D +WD+ Q T H+ V +
Sbjct: 144 GYLSCCR---FLDDGQI--ITSSG-DTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLK 197
Query: 353 IY-SASQDRTIKVWRASDGVMCR-TLEGHAHWVNTLAL-STDYLMRVEATSTGGFKYDPA 409
+ S + D + K+W DG MCR + GH +N ++ + Y + +D
Sbjct: 198 TFVSGACDASSKLWDIRDG-MCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLR 256
Query: 410 NPEE----SSKHALAKYQ--AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
+E S + + A G L++G DDF +W+ K +S + GH +
Sbjct: 257 ADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRS-GVLAGHDNRV 315
Query: 464 NCVEFSPDGRIIASASFDKSIKLWD 488
+C+ + DG +A+ S+D +++W+
Sbjct: 316 SCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 202 (76.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 57/208 (27%), Positives = 95/208 (45%)
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSKHAL---AKYQAQC--- 426
RTL GH + + D + V A+ G +D + HA+ + + C
Sbjct: 49 RTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKM--HAIPLRSSWVMTCAYA 106
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLA---RMTGHQQLINCVEFSPDGRIIASASFDKS 483
P G + G D ++N + + ++ + GH ++C F DG+II S+ D +
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTT 165
Query: 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
LWD G+ TT GH V ++ S D + VSG+ D++ K+W+++ Q GH
Sbjct: 166 CALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGH 225
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++ AV + P G A+G D RL+
Sbjct: 226 ISDINAVSFFPSGYAFATGSDDATCRLF 253
Score = 201 (75.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 90/331 (27%), Positives = 135/331 (40%)
Query: 79 NTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 138
N +V I +V +++ TR T + GH + ++ + + R L S S D + WD
Sbjct: 26 NDATLVQITSNMDSVGRIQMRTRRT--LRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWD 83
Query: 139 VTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTR 198
T K P T + + L + + I K VR V+R
Sbjct: 84 SYTTN---KMHAIPLRSSWVMTCAYAPSGNYVACGGL--DNICSIYNLKTREGNVR-VSR 137
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEGHKHWVLCIA 256
+PGH + +F +G+ + S SGDTT WD+ T QT F GH V+ ++
Sbjct: 138 ---ELPGHTGYLSCCRFLDDGQIITS-SGDTTCALWDIETGQQTTTFT--GHSGDVMSLS 191
Query: 257 WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
SPD K VSG + WD G Q GH I A+S+ P FA+
Sbjct: 192 LSPDLKTFVSGACDASSKLWDIRDG-MCRQSFTGHISDINAVSFFPSGY-----AFATGS 245
Query: 317 KDGAIRIWDVILSQCVRVLTSHTR--SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMC 373
D R++D+ Q + + + +T + + SG L+ + D VW A G
Sbjct: 246 DDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRS 305
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGF 404
L GH + V+ L + TD M V S F
Sbjct: 306 GVLAGHDNRVSCLGV-TDDGMAVATGSWDSF 335
Score = 196 (74.1 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 73/296 (24%), Positives = 124/296 (41%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+RGH I A+ W + R S+ +DG + IWD + + + + V +
Sbjct: 51 LRGHLAKIYAMHW-----GYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAY 105
Query: 348 GGSG-LIYSASQDRTIKVW--RASDGVM--CRTLEGHAHWVNTLALSTDYLMRVEATSTG 402
SG + D ++ + +G + R L GH +++ D + + T
Sbjct: 106 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSGDTT 165
Query: 403 GFKYDPANPEESSK---HALAKYQAQC-PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG 458
+D ++++ H+ P+ + VSG+ D + LW+ ++ TG
Sbjct: 166 CALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDI-RDGMCRQSFTG 224
Query: 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH---VQAVYMVAWSSDSR 515
H IN V F P G A+ S D + +L+D R + + L H + + VA+S R
Sbjct: 225 HISDINAVSFFPSGYAFATGSDDATCRLFDLRADQELL-LYSHDNIICGITSVAFSKSGR 283
Query: 516 LLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
LL++G D VW+ L GH + V + DG VA+G D LR+W
Sbjct: 284 LLLAGYDDFNCSVWDALKGGRSGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 245 (91.3 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 76/301 (25%), Positives = 139/301 (46%)
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEP--- 302
GH + + W+ DSK LVS ++G + WD+ +T K P+R W+ ++ P
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRS--SWVMTCAYAPSGN 110
Query: 303 F----HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ 358
F L++ C ++ ++G +++ R L++HT ++C R+ I ++S
Sbjct: 111 FVACGGLDNMCSIYSLKSREGNVKV--------SRELSAHTGYLSCCRFLDDNNIVTSSG 162
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418
D T +W G GH +LA+S D+ + + K E + +
Sbjct: 163 DTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVR-EGTCRQT 221
Query: 419 LAKYQAQ----C--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI---NCVEFS 469
+++ C P GE + +GSDD + L++ +++ L + H+ +I V FS
Sbjct: 222 FTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQE-LTTYS-HESIICGITSVAFS 279
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
GR++ + D + +WD + + TL GH V + ++D + +GS DS LK+W
Sbjct: 280 LSGRLLFAGYDDFNCNVWDSMKCERVGTLSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Query: 530 N 530
N
Sbjct: 340 N 340
Score = 216 (81.1 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 73/298 (24%), Positives = 128/298 (42%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+RGH I A+ W + S+ +DG + +WD + V + + V +
Sbjct: 51 LRGHLAKIYAMHWAT-----DSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAY 105
Query: 348 GGSG-LIYSASQDRTIKVW--RASDG--VMCRTLEGHAHWVNTLALSTDYLMRVEATSTG 402
SG + D ++ ++ +G + R L H +++ D + + T
Sbjct: 106 APSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTT 165
Query: 403 GFKYDPANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
+D ++ K + C P+ + +SG+ D + LW+ +E
Sbjct: 166 CALWDIETGQQ--KTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDV-REGTCRQTF 222
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAWSSDS 514
TGH+ IN + F P+G I + S D S +L+D R + +TT + + VA+S
Sbjct: 223 TGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYSHESIICGITSVAFSLSG 282
Query: 515 RLLVSGSADSTLKVWN-MKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
RLL +G D VW+ MK +++ L GH + V + DG VA+G D L++W
Sbjct: 283 RLLFAGYDDFNCNVWDSMKCERVGT-LSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Score = 197 (74.4 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 74/343 (21%), Positives = 142/343 (41%)
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
++ K +AD T + ++V + V +V+ TR T + GH + ++ ++ + +
Sbjct: 13 QLKKQIADARKACADTT--LAELVSGLEVVGRVQMRTRRT--LRGHLAKIYAMHWATDSK 68
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV--IHAWDS 278
L S S D + WD T + WV+ A++P + G + + I++ S
Sbjct: 69 LLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKS 128
Query: 279 STGK-QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS 337
G ++ + + H +++ + L+ SSG D +WD+ Q V
Sbjct: 129 REGNVKVSRELSAHTGYLSCCRF----LDDN-NIVTSSG-DTTCALWDIETGQQKTVFVG 182
Query: 338 HTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
HT + L S + D + K+W +G +T GH +N + +
Sbjct: 183 HTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAIC----FFPNG 238
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQAQ---CP--------EGEKLVSGSDDFTLFLWN 445
EA TG + + L Y + C G L +G DDF +W+
Sbjct: 239 EAICTGSDDASCRLFDLRADQELTTYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWD 298
Query: 446 PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
K ++ + ++GH ++C+ + DG +A+ S+D +K+W+
Sbjct: 299 SMKCER-VGTLSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 194 (73.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 56/208 (26%), Positives = 98/208 (47%)
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK-HAL---AKYQAQC--- 426
RTL GH + + +TD + V A+ G K + ++K HA+ + + C
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDG--KLIVWDTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 427 PEGEKLVSGSDD--FTLF-LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
P G + G D +++ L + E K ++ H ++C F D I+ S+ D +
Sbjct: 107 PSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTT 165
Query: 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
LWD G+ T GH +A S D +L +SG+ D++ K+W+++ Q GH
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++ A+ + P+GE + +G D RL+
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLF 253
Score = 162 (62.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 78/334 (23%), Positives = 137/334 (41%)
Query: 64 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 123
++ K +AD T + ++V + V +V+ TR T + GH + ++ ++ + +
Sbjct: 13 QLKKQIADARKACADTT--LAELVSGLEVVGRVQMRTRRT--LRGHLAKIYAMHWATDSK 68
Query: 124 SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183
L S S D + WD T K P T + + L + + I
Sbjct: 69 LLVSASQDGKLIVWDTYTTN---KVHAIPLRSSWVMTCAYAPSGNFVACGGL--DNMCSI 123
Query: 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF 243
K V+ V+R S+ G+ +F + ++ + SGDTT WD+ T
Sbjct: 124 YSLKSREGNVK-VSRELSAHTGYLSCC---RFLDDN-NIVTSSGDTTCALWDIETGQQKT 178
Query: 244 KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF 303
GH + +A SPD K +SG + WD G Q GH+ I A+ + P
Sbjct: 179 VFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGT-CRQTFTGHESDINAICFFP- 236
Query: 304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR--SVTCIRWGGSG-LIYSASQDR 360
N + + D + R++D+ Q + + + +T + + SG L+++ D
Sbjct: 237 --NGEA--ICTGSDDASCRLFDLRADQELTTYSHESIICGITSVAFSLSGRLLFAGYDDF 292
Query: 361 TIKVWRASDGVMCR---TLEGHAHWVNTLALSTD 391
VW D + C TL GH + V+ L ++ D
Sbjct: 293 NCNVW---DSMKCERVGTLSGHDNRVSCLGVTAD 323
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 204 (76.9 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 74/327 (22%), Positives = 147/327 (44%)
Query: 269 KNGVIHAWDSSTGKQIGQPMR-------GHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+N ++ + + QP+R GH+ + LS+ ++ S+ D +I
Sbjct: 385 QNNLVELYSLNPSLPTPQPVRTSRITIGGHRSDVRTLSFSSDNI-----AVLSAAAD-SI 438
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
+IW+ QC+R +T + G ++ + ++++ + G + T++ H
Sbjct: 439 KIWNRSTLQCIRTMTCEYALCSFFVPGDRQVVIGTKTGK-LQLYDLASGNLLETIDAHDG 497
Query: 382 WVNTLALSTDYLMRVEATSTGGFKY---DPANPEESSKHALAKYQAQ---------CPE- 428
+ +++LS D V + K+ + E S++ L+ Q + C
Sbjct: 498 ALWSMSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEDVLCVSY 557
Query: 429 --GEKLVSGSD-DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIK 485
+KL++ S D T+ ++ + K L+ + GH+ + C++ S DG +IA+ S D+++K
Sbjct: 558 SPNQKLLAVSLLDCTVKIFYVDTLKFFLS-LYGHKLPVICMDISHDGALIATGSADRNVK 616
Query: 486 LWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD 545
+W G +L H +V + + S L + D +K W+ + Q L GH
Sbjct: 617 IWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQ 676
Query: 546 EVYAVDWAPDGEKVASGGKDKVLRLWQ 572
E++ + +P G+ V S DK LRLW+
Sbjct: 677 EIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 196 (74.1 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 72/314 (22%), Positives = 137/314 (43%)
Query: 194 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL--FKCEGHKHW 251
+PV ++ GH V ++ FS + ++ S + D+ ++ W+ +T + CE +
Sbjct: 402 QPVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAADS-IKIWNRSTLQCIRTMTCE----Y 456
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
LC + P +Q+V G K G + +D ++G + + + H + ++S P R
Sbjct: 457 ALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLL-ETIDAHDGALWSMSLSPDQ-----RG 510
Query: 312 FASSGKDGAIRIWDVIL-----SQCVRVLTSHTRS------VTCIRWGGSGLIYSASQ-D 359
F + G D +++ WD L S R+ TR+ V C+ + + + + S D
Sbjct: 511 FVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLD 570
Query: 360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL 419
T+K++ +L GH V + +S D + ++ K + + K
Sbjct: 571 CTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLF 630
Query: 420 AK-----YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRI 474
A Y P+ + D + W+ +K + + + GH Q I C+ SP G
Sbjct: 631 AHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKFEH-IQTLEGHHQEIWCLAVSPSGDY 689
Query: 475 IASASFDKSIKLWD 488
+ S+S DKS++LW+
Sbjct: 690 VVSSSHDKSLRLWE 703
Score = 169 (64.5 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 72/312 (23%), Positives = 133/312 (42%)
Query: 97 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFY 156
+PV ++ GH V ++ FS + ++ S + D+ ++ W+ +T +C T Y
Sbjct: 402 QPVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAADS-IKIWNRST----LQCIRTMTCEY 456
Query: 157 VNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFS 216
+ +P D + V+ K ++ + ++ H A+ S+ S
Sbjct: 457 A-------LCSFFVPGDR---QVVIGTKTGKLQLYDLAS-GNLLETIDAHDGALWSMSLS 505
Query: 217 PNGRSLASGSGDTTVRFWDV-------TTQTPLFKCEGHK----HWVLCIAWSPDSKQLV 265
P+ R +G D +V+FWD +TQ L + VLC+++SP+ K L
Sbjct: 506 PDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLA 565
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ + + T K + GHK + + ++H A+ D ++IW
Sbjct: 566 VSLLDCTVKIFYVDTLKFF-LSLYGHKLPVICMD-----ISHDGALIATGSADRNVKIWG 619
Query: 326 VILSQCVRVLTSHTRSVTCIRW-GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAH--W 382
+ C + L +H SV +++ S L ++A +D IK W A +TLEGH W
Sbjct: 620 LDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIW 679
Query: 383 VNTLALSTDYLM 394
++ S DY++
Sbjct: 680 CLAVSPSGDYVV 691
Score = 159 (61.0 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 49/186 (26%), Positives = 87/186 (46%)
Query: 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG 267
E V+ V +SPN + LA D TV+ + V T GHK V+C+ S D + +G
Sbjct: 550 EDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATG 609
Query: 268 CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP-FHLNHQCRRFASSGKDGAIRIWDV 326
+ + W G + + H + L + P HL F ++GKD I+ WD
Sbjct: 610 SADRNVKIWGLDFG-DCHKSLFAHDDSVMYLQFVPKSHL------FFTAGKDHKIKQWDA 662
Query: 327 ILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW-RASDGVMC---RTLEGHAH 381
+ ++ L H + + C+ SG + S+S D+++++W R + ++ R +E A
Sbjct: 663 DKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWERTREPLILEEEREMEREAE 722
Query: 382 WVNTLA 387
+ ++A
Sbjct: 723 YEESVA 728
Score = 159 (61.0 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 58/224 (25%), Positives = 97/224 (43%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEIT 163
++ H A+ S+ SP+ R +G D +V+FWD L K E T V +T
Sbjct: 491 TIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDFE----LVKDENSTQKRLSVKQTRTL 546
Query: 164 KTLADVLPLDTLNTEEV--VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
+ DVL + +++ V ++ +F V + + S+ GH VI + S +G
Sbjct: 547 QLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTL-KFFLSLYGHKLPVICMDISHDGAL 605
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+A+GS D V+ W + H V+ + + P S + K+ I WD+
Sbjct: 606 IATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKF 665
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ I Q + GH Q I L+ P SS D ++R+W+
Sbjct: 666 EHI-QTLEGHHQEIWCLAVSP-----SGDYVVSSSHDKSLRLWE 703
Score = 158 (60.7 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 36/126 (28%), Positives = 64/126 (50%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH A+ ++K+ G LASGS DT + WDV ++ L++ +GHK + + + L
Sbjct: 105 GHKAAITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLL 164
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
V+ K+ ++ WD T + + M GH+ + W L+ + +R + D +R+W
Sbjct: 165 VTSGKDTMVKWWDLDT-QHCFKTMVGHRTEV----WGLVLLSEE-KRLITGASDSELRVW 218
Query: 325 DVILSQ 330
D+ Q
Sbjct: 219 DIAYLQ 224
Score = 155 (59.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 36/145 (24%), Positives = 73/145 (50%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+G L G +D ++ +++ + ++ GH+ I +++ G +AS S D I +
Sbjct: 75 PDGLHLAVGYEDGSIRIFSLLSGEGNVT-FNGHKAAITTLKYDQLGGRLASGSKDTDIIV 133
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
WD + L+GH A+ + + LLV+ D+ +K W++ T+ + + GH E
Sbjct: 134 WDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTE 193
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
V+ + + +++ +G D LR+W
Sbjct: 194 VWGLVLLSEEKRLITGASDSELRVW 218
Score = 142 (55.0 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG 500
+F+W+ K +K L + G +Q + C+ SPDG +A D SI+++ G+ T G
Sbjct: 47 VFIWDLRKGEKILI-LQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNG 105
Query: 501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVA 560
H A+ + + L SGS D+ + VW++ + L GH D + + + +
Sbjct: 106 HKAAITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLV 165
Query: 561 SGGKDKVLRLW 571
+ GKD +++ W
Sbjct: 166 TSGKDTMVKWW 176
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 41/152 (26%), Positives = 73/152 (48%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G +L SGS D + +W+ E L R+ GH+ I F + ++ ++ D +K WD
Sbjct: 119 GGRLASGSKDTDIIVWDVINES-GLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWD 177
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK------------TKKI 536
T+ GH V+ + S+ + L++G++DS L+VW++ KKI
Sbjct: 178 LDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWDIAYLQEIEDPEEPDPKKI 237
Query: 537 EQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
+ PG D + A D A + ++ +D++L
Sbjct: 238 KGSSPGIQDTLEAEDGAFETDEAP---EDRIL 266
Score = 137 (53.3 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 44/162 (27%), Positives = 69/162 (42%)
Query: 231 VRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRG 290
V WD+ + +G K V C+ SPD L G ++G I + +G+ G
Sbjct: 47 VFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEG-NVTFNG 105
Query: 291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT-CIRWGG 349
HK IT L ++ R AS KD I +WDVI + L H ++T +
Sbjct: 106 HKAAITTLKYDQLG-----GRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLRE 160
Query: 350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
L+ ++ +D +K W +T+ GH V L L ++
Sbjct: 161 KNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSE 202
Score = 119 (46.9 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 60/266 (22%), Positives = 110/266 (41%)
Query: 309 CRRFASSGKDGAIRIWDVILSQCVRVLTSH-TRSVTCIRWGGSGLIYSASQDRTIKVWRA 367
CR+ S ++G R+ ++ + + R+L H T SV + S D+ +K R
Sbjct: 268 CRKAGSIMREGRDRVVNLAVDKTGRILACHGTDSVLELFCILSKKEIQKKMDKKMKKARK 327
Query: 368 SDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG-FK-YDPANPEESSKHALAKYQAQ 425
+ E VN D + RV T K +D + A+ Q
Sbjct: 328 KAKLHSSKGEEEDPEVNVEMSLQDEIQRVTNIKTSAKIKSFDLIHSPHGELKAVFLLQNN 387
Query: 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIK 485
E L S + L P+ + S + GH+ + + FS D + SA+ D SIK
Sbjct: 388 LVE---LYSLNPS----LPTPQPVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAAD-SIK 439
Query: 486 LWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD 545
+W+ + I T+ A+ D R +V G+ L+++++ + + + + H
Sbjct: 440 IWNRSTLQCIRTMTCEY-ALCSFFVPGD-RQVVIGTKTGKLQLYDLASGNLLETIDAHDG 497
Query: 546 EVYAVDWAPDGEKVASGGKDKVLRLW 571
++++ +PD +GG DK ++ W
Sbjct: 498 ALWSMSLSPDQRGFVTGGADKSVKFW 523
Score = 115 (45.5 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 63/272 (23%), Positives = 106/272 (38%)
Query: 194 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVL 253
R +C +M E + F P R + G+ ++ +D+ + L + H +
Sbjct: 443 RSTLQCIRTMT--CEYALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALW 500
Query: 254 CIAWSPDSKQLVSGCKNGVIHAWD-------SSTGKQIGQPMRGHKQW---ITALSWEPF 303
++ SPD + V+G + + WD +ST K++ Q + +S+ P
Sbjct: 501 SMSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYSP- 559
Query: 304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTI 362
N + A S D ++I+ V + L H V C+ G LI + S DR +
Sbjct: 560 --NQKL--LAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSADRNV 615
Query: 363 KVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY 422
K+W G ++L H V L + A K A+ E + +
Sbjct: 616 KIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHH 675
Query: 423 Q-----AQCPEGEKLVSGSDDFTLFLWNPEKE 449
Q A P G+ +VS S D +L LW +E
Sbjct: 676 QEIWCLAVSPSGDYVVSSSHDKSLRLWERTRE 707
Score = 110 (43.8 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 42/169 (24%), Positives = 70/169 (41%)
Query: 119 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTE 178
SP+G LA G D ++R + L EG F ++ IT D L +
Sbjct: 74 SPDGLHLAVGYEDGSIRIFS------LLSGEGN-VTFNGHKAAITTLKYDQLGGRLASGS 126
Query: 179 EVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 238
+ DI+ V + R + GH +A+ F L + DT V++WD+ T
Sbjct: 127 KDTDIIVWD--VINESGLYR----LKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDT 180
Query: 239 QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
Q GH+ V + + K+L++G + + WD + ++I P
Sbjct: 181 QHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWDIAYLQEIEDP 229
Score = 109 (43.4 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 34/129 (26%), Positives = 58/129 (44%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH A+ ++K+ G LASGS DT + WDV ++ L++ +G ++ IT+ L
Sbjct: 105 GHKAAITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKG-------HKDAITQAL- 156
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
L L D + + + C +M GH V + + L +G+
Sbjct: 157 -FLREKNLLVTSGKDTMVKWWDL----DTQHCFKTMVGHRTEVWGLVLLSEEKRLITGAS 211
Query: 228 DTTVRFWDV 236
D+ +R WD+
Sbjct: 212 DSELRVWDI 220
Score = 65 (27.9 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ 142
+ GH +A+ F L + DT V++WD+ TQ
Sbjct: 145 LKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQ 181
Score = 60 (26.2 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
C +M GH V + + L +G+ D+ +R WD+
Sbjct: 183 CFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWDI 220
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 222 (83.2 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 74/276 (26%), Positives = 124/276 (44%)
Query: 312 FASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASD 369
FAS G D I +W+V + VL ++T ++W S ++Y +S D + W A
Sbjct: 65 FASGGMDRQILLWNVFGDVKNYGVLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVS 124
Query: 370 GVMCRTLEGHAHWVNTL---ALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ--- 423
G R +GHA VN L + ++ L V T K + ++ K KY
Sbjct: 125 GQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCT--MKVWDSRSKDCIKTIEEKYPLTA 182
Query: 424 -AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK 482
A +G ++ G D + +W+ S + GH+ +I + S DG + S S D
Sbjct: 183 VAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHV-LKGHKDIITSLAISKDGSSLLSNSMDN 241
Query: 483 SIKLWDGR--------IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534
+++++D + + F + G + VAWS +SR + +GS+D + VW+ T
Sbjct: 242 TVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVYVWSA-TG 300
Query: 535 KIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL 570
+ LPGH V VD+ P + + S D+ + L
Sbjct: 301 DLRYVLPGHEGSVNHVDFHPHQDIILSCSSDRTIFL 336
Score = 204 (76.9 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 68/299 (22%), Positives = 126/299 (42%)
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-EGHKHWVLCIAWSPDS 261
M GH V+ +F P+G ASG D + W+V + G K + + WS DS
Sbjct: 46 MFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNYGVLNGCKGAITDLQWSRDS 105
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+ + + + +WD+ +G++I + +GH + AL L S D +
Sbjct: 106 RVVYCSSSDTHLMSWDAVSGQKI-RKHKGHAGVVNALDV----LKVGSELLTSVSDDCTM 160
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHA 380
++WD C++ + +T + G ++ D IK+W + L+GH
Sbjct: 161 KVWDSRSKDCIKTI-EEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHK 219
Query: 381 HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE---------- 430
+ +LA+S D + + + P S++ L ++ E
Sbjct: 220 DIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSR 279
Query: 431 --KLV-SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
+ V +GS D +++W+ + + + + GH+ +N V+F P II S S D++I L
Sbjct: 280 NSRFVGAGSSDKNVYVWSATGDLRYV--LPGHEGSVNHVDFHPHQDIILSCSSDRTIFL 336
Score = 170 (64.9 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 63/250 (25%), Positives = 105/250 (42%)
Query: 338 HTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVM-CRTLEGHAHWVNTLALSTDY-LM 394
HT V R+ SG + S DR I +W V L G + L S D ++
Sbjct: 49 HTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNYGVLNGCKGAITDLQWSRDSRVV 108
Query: 395 RVEATSTGGFKYDPANPEESSKH----ALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKE 449
++ T +D + ++ KH + G E L S SDD T+ +W +
Sbjct: 109 YCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVW--DSR 166
Query: 450 KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVA 509
K + + + V + G + D +IK+WD R L+GH + +A
Sbjct: 167 SKDCIKTIEEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKDIITSLA 226
Query: 510 WSSDSRLLVSGSADSTLKVWNMK----TKKIEQDLPG--HGDE--VYAVDWAPDGEKVAS 561
S D L+S S D+T++++++K ++ Q G HG E + V W+ + V +
Sbjct: 227 ISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGA 286
Query: 562 GGKDKVLRLW 571
G DK + +W
Sbjct: 287 GSSDKNVYVW 296
Score = 148 (57.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 76/303 (25%), Positives = 122/303 (40%)
Query: 241 PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALS 299
P + GH VL + P SG + I W+ K G + G K IT L
Sbjct: 42 PNLQMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNYGV-LNGCKGAITDLQ 100
Query: 300 WEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC--IRWGGSGLIYSAS 357
W + R S D + WD + Q +R H V + GS L+ S S
Sbjct: 101 W-----SRDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVS 155
Query: 358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESSK 416
D T+KVW + +T+E + + +A++ G K +D N S
Sbjct: 156 DDCTMKVWDSRSKDCIKTIE-EKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCS-- 212
Query: 417 HALAKYQ------AQCPEGEKLVSGSDDFTLFLWNPE---KEKKSLARMTG--HQQLINC 465
H L ++ A +G L+S S D T+ +++ + ++ L G H Q N
Sbjct: 213 HVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNL 272
Query: 466 --VEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD 523
V +S + R + + S DK++ +W G L GH +V V + +++S S+D
Sbjct: 273 LGVAWSRNSRFVGAGSSDKNVYVWSAT-GDLRYVLPGHEGSVNHVDFHPHQDIILSCSSD 331
Query: 524 STL 526
T+
Sbjct: 332 RTI 334
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/123 (30%), Positives = 59/123 (47%)
Query: 455 RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD--GRIGKFITTLRGHVQAVYMVAWSS 512
+M GH + F P G AS D+ I LW+ G + + L G A+ + WS
Sbjct: 45 QMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNY-GVLNGCKGAITDLQWSR 103
Query: 513 DSRLLVSGSADSTLKVWN-MKTKKIEQDLPGHGDEVYAVDWAPDG-EKVASGGKDKVLRL 570
DSR++ S+D+ L W+ + +KI + GH V A+D G E + S D +++
Sbjct: 104 DSRVVYCSSSDTHLMSWDAVSGQKIRKH-KGHAGVVNALDVLKVGSELLTSVSDDCTMKV 162
Query: 571 WQN 573
W +
Sbjct: 163 WDS 165
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 51/204 (25%), Positives = 92/204 (45%)
Query: 108 GHAEAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
GHA V ++ G L S S D T++ WD ++ C T + E K
Sbjct: 133 GHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKD----CIKT-----IEE----KYP 179
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGS 226
+ + T+ + + ++ +R C+ + GH + + S+ S +G SL S S
Sbjct: 180 LTAVAIAQQGTQVFIGGIDGAIKIWDLRN-NHCSHVLKGHKDIITSLAISKDGSSLLSNS 238
Query: 227 GDTTVRFWDVTT------QTPLFK--CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS 278
D TVR +DV Q +F+ G +H +L +AWS +S+ + +G + ++ W S
Sbjct: 239 MDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVYVW-S 297
Query: 279 STGKQIGQPMRGHKQWITALSWEP 302
+TG + + GH+ + + + P
Sbjct: 298 ATG-DLRYVLPGHEGSVNHVDFHP 320
Score = 68 (29.0 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
M GH V+ +F P+G ASG D + W+V
Sbjct: 46 MFGHTAEVLVARFDPSGSYFASGGMDRQILLWNV 79
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 237 (88.5 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 72/216 (33%), Positives = 110/216 (50%)
Query: 371 VMCRTLEGHAHWVNTLALST---DYLMR-------VEATSTGGFKYDPANPEESSK-HA- 418
V+ TLEGH WV +LA + D L+ ++ TGG P++S K H+
Sbjct: 8 VLRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSH 67
Query: 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
+ + +G +S S D TL LW+ E + + R GH+ + V + + R I SA
Sbjct: 68 IVQDVTISADGAYALSASWDRTLRLWDLETGETT-QRFVGHKGDVLSVSIAKNLRQIVSA 126
Query: 479 SFDKSIKLWDGRIGKFITTLRGH---VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
S DK++K+W+ IG+ + TL GH V AV ++ S S ++S S D T+K W++
Sbjct: 127 SRDKTVKVWN-TIGECMATLTGHNDWVSAV-RISPSDQSSTVISASWDKTVKSWDLADYS 184
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ D GH + + +PDG AS GKD V+ LW
Sbjct: 185 VNADFIGHTGYISCITLSPDGSLCASAGKDGVIILW 220
Score = 210 (79.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 70/256 (27%), Positives = 113/256 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
S GH+ V V S +G S S D T+R WD+ T + GHK VL ++ + +
Sbjct: 61 SFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNL 120
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+Q+VS ++ + W++ G+ + + GH W++A+ P + Q S+ D +
Sbjct: 121 RQIVSASRDKTVKVWNT-IGECMAT-LTGHNDWVSAVRISP---SDQSSTVISASWDKTV 175
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
+ WD+ HT ++CI G L SA +D I +W + TLE A
Sbjct: 176 KSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKA 235
Query: 381 HWVNTLALSTDYLMRVEATSTGG--FKY------DPANPE----ESSKHALAKYQAQCPE 428
V+ LA S + AT++G FK D PE ++K A A +
Sbjct: 236 E-VHALAFSPNRYWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSAD 294
Query: 429 GEKLVSGSDDFTLFLW 444
G+ L +G D + +W
Sbjct: 295 GQNLFAGYTDNVIRVW 310
Score = 198 (74.8 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 75/309 (24%), Positives = 133/309 (43%)
Query: 246 EGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGK--QIGQP---MRGHKQWITALS 299
EGH WV +A +P L+ SG ++ + W + G+ Q G P +GH + ++
Sbjct: 14 EGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVT 73
Query: 300 WEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQ 358
++ S+ D +R+WD+ + + H V + + I SAS+
Sbjct: 74 -----ISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASR 128
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALS-TDYLMRVEATSTGGF--KYDPANPEESS 415
D+T+KVW M TL GH WV+ + +S +D V + S +D A+ ++
Sbjct: 129 DKTVKVWNTIGECMA-TLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNA 187
Query: 416 KHALAKYQAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD 471
C P+G S D + LW+ K K +L + + ++ + FSP+
Sbjct: 188 DFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNK-TLYTLEAKAE-VHALAFSPN 245
Query: 472 GRIIASASFD--KSIKLWDGRI-----GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524
+A+A+ K KL + + +F +AWS+D + L +G D+
Sbjct: 246 RYWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTDN 305
Query: 525 TLKVWNMKT 533
++VW + T
Sbjct: 306 VIRVWQVMT 314
Score = 194 (73.4 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 73/306 (23%), Positives = 132/306 (43%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC------VRVLTSHTRS 341
+ GH W+T+L+ P H + S +D + W + + + H+
Sbjct: 13 LEGHNGWVTSLATTPAHPD----LLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHI 68
Query: 342 VTCIRWGGSGLI-YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATS 400
V + G SAS DRT+++W G + GH V +++++ + V A+
Sbjct: 69 VQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASR 128
Query: 401 TGGFKYDPANPE---ESSKH---ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
K E + H A + + ++S S D T+ W+ + A
Sbjct: 129 DKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVN-A 187
Query: 455 RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS 514
GH I+C+ SPDG + ASA D I LWD K + TL + V+ +A+S +
Sbjct: 188 DFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-VHALAFSPN- 245
Query: 515 RLLVSGSADSTLKVWNMKTKKIEQDL-P-------GHGDEVYAVDWAPDGEKVASGGKDK 566
R ++ + S +K++ ++ + + +L P E ++ W+ DG+ + +G D
Sbjct: 246 RYWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTDN 305
Query: 567 VLRLWQ 572
V+R+WQ
Sbjct: 306 VIRVWQ 311
Score = 186 (70.5 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 58/211 (27%), Positives = 96/211 (45%)
Query: 202 SMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVT----TQ--TPLFKCEGHKHWVLC 254
++ GH V S+ +P + L SGS D T+ W +T Q P +GH H V
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 255 IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
+ S D +S + + WD TG+ Q GHK + ++S + R+ S
Sbjct: 72 VTISADGAYALSASWDRTLRLWDLETGETT-QRFVGHKGDVLSVS-----IAKNLRQIVS 125
Query: 315 SGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS---GLIYSASQDRTIKVWRASDGV 371
+ +D +++W+ I +C+ LT H V+ +R S + SAS D+T+K W +D
Sbjct: 126 ASRDKTVKVWNTI-GECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYS 184
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTG 402
+ GH +++ + LS D + A G
Sbjct: 185 VNADFIGHTGYISCITLSPDGSLCASAGKDG 215
Score = 178 (67.7 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 67/269 (24%), Positives = 114/269 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S GH+ V V S +G S S D T+R WD+ T + G + V I K
Sbjct: 61 SFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVG--HKGDVLSVSIAK 118
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS--L 222
L ++ T +V + + + C +++ GH + V +V+ SP+ +S +
Sbjct: 119 NLRQIVSASRDKTVKVWNTIGE------------CMATLTGHNDWVSAVRISPSDQSSTV 166
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
S S D TV+ WD+ + GH ++ CI SPD S K+GVI WD + K
Sbjct: 167 ISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNK 226
Query: 283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG-KDGAIR---IWDVILSQCVRVLTSH 338
+ + K + AL++ P + +SG K ++ + D + + T+
Sbjct: 227 TL-YTLEA-KAEVHALAFSPNR--YWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAK 282
Query: 339 TRSVTCIRWGGSGL-IYSASQDRTIKVWR 366
+ W G +++ D I+VW+
Sbjct: 283 DPEAISLAWSADGQNLFAGYTDNVIRVWQ 311
Score = 151 (58.2 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 62/270 (22%), Positives = 114/270 (42%)
Query: 105 SMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
++ GH V S+ +P + L SGS D T+ W +T G P + + I
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGED--NQYGIPKKSFKGHSHIV 69
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT--RCTSSMPGHAEAVISVKFSPNGRS 221
+ DV T++ + + ++ + T GH V+SV + N R
Sbjct: 70 Q---DV----TISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQ 122
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD--SKQLVSGCKNGVIHAWDSS 279
+ S S D TV+ W+ + + GH WV + SP S ++S + + +WD +
Sbjct: 123 IVSASRDKTVKVWNTIGEC-MATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLA 181
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT 339
+ GH +I+ ++ P C AS+GKDG I +WD+ ++ + L +
Sbjct: 182 D-YSVNADFIGHTGYISCITLSPD--GSLC---ASAGKDGVIILWDLNKNKTLYTLEAKA 235
Query: 340 RSVTCIRWGGSGLIYSASQDRTIKVWRASD 369
V + + + +A+ IK+++ +
Sbjct: 236 E-VHALAFSPNRYWLAAATTSGIKIFKLQE 264
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 237 (88.5 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 72/216 (33%), Positives = 110/216 (50%)
Query: 371 VMCRTLEGHAHWVNTLALST---DYLMR-------VEATSTGGFKYDPANPEESSK-HA- 418
V+ TLEGH WV +LA + D L+ ++ TGG P++S K H+
Sbjct: 8 VLRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSH 67
Query: 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
+ + +G +S S D TL LW+ E + + R GH+ + V + + R I SA
Sbjct: 68 IVQDVTISADGAYALSASWDRTLRLWDLETGETT-QRFVGHKGDVLSVSIAKNLRQIVSA 126
Query: 479 SFDKSIKLWDGRIGKFITTLRGH---VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
S DK++K+W+ IG+ + TL GH V AV ++ S S ++S S D T+K W++
Sbjct: 127 SRDKTVKVWN-TIGECMATLTGHNDWVSAV-RISPSDQSSTVISASWDKTVKSWDLADYS 184
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ D GH + + +PDG AS GKD V+ LW
Sbjct: 185 VNADFIGHTGYISCITLSPDGSLCASAGKDGVIILW 220
Score = 210 (79.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 70/256 (27%), Positives = 113/256 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
S GH+ V V S +G S S D T+R WD+ T + GHK VL ++ + +
Sbjct: 61 SFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNL 120
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+Q+VS ++ + W++ G+ + + GH W++A+ P + Q S+ D +
Sbjct: 121 RQIVSASRDKTVKVWNT-IGECMAT-LTGHNDWVSAVRISP---SDQSSTVISASWDKTV 175
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
+ WD+ HT ++CI G L SA +D I +W + TLE A
Sbjct: 176 KSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKA 235
Query: 381 HWVNTLALSTDYLMRVEATSTGG--FKY------DPANPE----ESSKHALAKYQAQCPE 428
V+ LA S + AT++G FK D PE ++K A A +
Sbjct: 236 E-VHALAFSPNRYWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSAD 294
Query: 429 GEKLVSGSDDFTLFLW 444
G+ L +G D + +W
Sbjct: 295 GQNLFAGYTDNVIRVW 310
Score = 198 (74.8 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 75/309 (24%), Positives = 133/309 (43%)
Query: 246 EGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGK--QIGQP---MRGHKQWITALS 299
EGH WV +A +P L+ SG ++ + W + G+ Q G P +GH + ++
Sbjct: 14 EGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVT 73
Query: 300 WEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQ 358
++ S+ D +R+WD+ + + H V + + I SAS+
Sbjct: 74 -----ISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASR 128
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALS-TDYLMRVEATSTGGF--KYDPANPEESS 415
D+T+KVW M TL GH WV+ + +S +D V + S +D A+ ++
Sbjct: 129 DKTVKVWNTIGECMA-TLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNA 187
Query: 416 KHALAKYQAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD 471
C P+G S D + LW+ K K +L + + ++ + FSP+
Sbjct: 188 DFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNK-TLYTLEAKAE-VHALAFSPN 245
Query: 472 GRIIASASFD--KSIKLWDGRI-----GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524
+A+A+ K KL + + +F +AWS+D + L +G D+
Sbjct: 246 RYWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTDN 305
Query: 525 TLKVWNMKT 533
++VW + T
Sbjct: 306 VIRVWQVMT 314
Score = 194 (73.4 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 73/306 (23%), Positives = 132/306 (43%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC------VRVLTSHTRS 341
+ GH W+T+L+ P H + S +D + W + + + H+
Sbjct: 13 LEGHNGWVTSLATTPAHPD----LLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHI 68
Query: 342 VTCIRWGGSGLI-YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATS 400
V + G SAS DRT+++W G + GH V +++++ + V A+
Sbjct: 69 VQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASR 128
Query: 401 TGGFKYDPANPE---ESSKH---ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
K E + H A + + ++S S D T+ W+ + A
Sbjct: 129 DKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVN-A 187
Query: 455 RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS 514
GH I+C+ SPDG + ASA D I LWD K + TL + V+ +A+S +
Sbjct: 188 DFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-VHALAFSPN- 245
Query: 515 RLLVSGSADSTLKVWNMKTKKIEQDL-P-------GHGDEVYAVDWAPDGEKVASGGKDK 566
R ++ + S +K++ ++ + + +L P E ++ W+ DG+ + +G D
Sbjct: 246 RYWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTDN 305
Query: 567 VLRLWQ 572
V+R+WQ
Sbjct: 306 VIRVWQ 311
Score = 186 (70.5 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 58/211 (27%), Positives = 96/211 (45%)
Query: 202 SMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVT----TQ--TPLFKCEGHKHWVLC 254
++ GH V S+ +P + L SGS D T+ W +T Q P +GH H V
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 255 IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
+ S D +S + + WD TG+ Q GHK + ++S + R+ S
Sbjct: 72 VTISADGAYALSASWDRTLRLWDLETGETT-QRFVGHKGDVLSVS-----IAKNLRQIVS 125
Query: 315 SGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS---GLIYSASQDRTIKVWRASDGV 371
+ +D +++W+ I +C+ LT H V+ +R S + SAS D+T+K W +D
Sbjct: 126 ASRDKTVKVWNTI-GECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYS 184
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTG 402
+ GH +++ + LS D + A G
Sbjct: 185 VNADFIGHTGYISCITLSPDGSLCASAGKDG 215
Score = 178 (67.7 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 67/269 (24%), Positives = 114/269 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S GH+ V V S +G S S D T+R WD+ T + G + V I K
Sbjct: 61 SFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVG--HKGDVLSVSIAK 118
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS--L 222
L ++ T +V + + + C +++ GH + V +V+ SP+ +S +
Sbjct: 119 NLRQIVSASRDKTVKVWNTIGE------------CMATLTGHNDWVSAVRISPSDQSSTV 166
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
S S D TV+ WD+ + GH ++ CI SPD S K+GVI WD + K
Sbjct: 167 ISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNK 226
Query: 283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG-KDGAIR---IWDVILSQCVRVLTSH 338
+ + K + AL++ P + +SG K ++ + D + + T+
Sbjct: 227 TL-YTLEA-KAEVHALAFSPNR--YWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAK 282
Query: 339 TRSVTCIRWGGSGL-IYSASQDRTIKVWR 366
+ W G +++ D I+VW+
Sbjct: 283 DPEAISLAWSADGQNLFAGYTDNVIRVWQ 311
Score = 151 (58.2 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 62/270 (22%), Positives = 114/270 (42%)
Query: 105 SMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
++ GH V S+ +P + L SGS D T+ W +T G P + + I
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGED--NQYGIPKKSFKGHSHIV 69
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT--RCTSSMPGHAEAVISVKFSPNGRS 221
+ DV T++ + + ++ + T GH V+SV + N R
Sbjct: 70 Q---DV----TISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQ 122
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD--SKQLVSGCKNGVIHAWDSS 279
+ S S D TV+ W+ + + GH WV + SP S ++S + + +WD +
Sbjct: 123 IVSASRDKTVKVWNTIGEC-MATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLA 181
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT 339
+ GH +I+ ++ P C AS+GKDG I +WD+ ++ + L +
Sbjct: 182 D-YSVNADFIGHTGYISCITLSPD--GSLC---ASAGKDGVIILWDLNKNKTLYTLEAKA 235
Query: 340 RSVTCIRWGGSGLIYSASQDRTIKVWRASD 369
V + + + +A+ IK+++ +
Sbjct: 236 E-VHALAFSPNRYWLAAATTSGIKIFKLQE 264
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 255 (94.8 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 66/242 (27%), Positives = 118/242 (48%)
Query: 338 HTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
H VT +++ G L+ SAS+DRT+++W + H V ++ S D
Sbjct: 17 HKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLA 76
Query: 397 EATSTGGFKYDPANPEESSKHALAKYQ--AQC----PEGEKLVSGSDDFTLFLWNPEKEK 450
A+ K + ++L ++ +C P+G +VS S+D T+ +W+ K
Sbjct: 77 TASEDKSIKVWSMY-RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN-K 134
Query: 451 KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW 510
+ + + N V+F+P G IASA D+++K+WD R+ K + + H V +++
Sbjct: 135 QCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISF 194
Query: 511 SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL 570
L++ S+D TLK+ ++ ++ L GH V+ V ++ GE ASGG D + L
Sbjct: 195 HPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLL 254
Query: 571 WQ 572
W+
Sbjct: 255 WR 256
Score = 248 (92.4 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 59/190 (31%), Positives = 99/190 (52%)
Query: 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD 260
S H V SV FS +G+ LA+ S D +++ W + Q L+ H HWV C +SPD
Sbjct: 54 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD 113
Query: 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
+ +VS ++ I WD+ T KQ + + ++ F+ + C AS+G D
Sbjct: 114 GRLIVSCSEDKTIKIWDT-TNKQC---VNNFSDSVGFANFVDFNPSGTC--IASAGSDQT 167
Query: 321 IRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGH 379
+++WDV +++ ++ H+ V CI + SG + +AS D T+K+ +G + TL+GH
Sbjct: 168 VKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGH 227
Query: 380 AHWVNTLALS 389
V T++ S
Sbjct: 228 TGPVFTVSFS 237
Score = 219 (82.2 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 45/131 (34%), Positives = 76/131 (58%)
Query: 443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW--DGRIGKFITTLRG 500
LWN + ++ R GH+ ++ V+FSP G ++ASAS D++++LW D R GKF + +
Sbjct: 2 LWNFKPHARAY-RYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKR-GKF-SEFKA 58
Query: 501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVA 560
H V V +S+D + L + S D ++KVW+M ++ L H V ++PDG +
Sbjct: 59 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 118
Query: 561 SGGKDKVLRLW 571
S +DK +++W
Sbjct: 119 SCSEDKTIKIW 129
Score = 206 (77.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 59/204 (28%), Positives = 91/204 (44%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH + V SV+FSP+G LAS S D TVR W + + + H V + +S D + L
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL 75
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
+ ++ I W + + R H W+ + P R S +D I+IW
Sbjct: 76 ATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSP-----DGRLIVSCSEDKTIKIW 129
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
D QCV + + + SG I SA D+T+KVW + + + H+ V
Sbjct: 130 DTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV 189
Query: 384 NTLAL--STDYLMRVEATSTGGFK 405
N ++ S +YL + A+S G K
Sbjct: 190 NCISFHPSGNYL--ITASSDGTLK 211
Score = 173 (66.0 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 57/260 (21%), Positives = 104/260 (40%)
Query: 234 WDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQ 293
W+ ++ GHK V + +SP L S ++ + W + + + H
Sbjct: 3 WNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE-FKAHTA 61
Query: 294 WITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-L 352
+ ++ F + Q A++ +D +I++W + + + L HT V C ++ G L
Sbjct: 62 PVRSVD---FSADGQF--LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRL 116
Query: 353 IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE 412
I S S+D+TIK+W ++ + N + + A S K
Sbjct: 117 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 176
Query: 413 ESSKH-ALAKYQAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE 467
+ +H + C P G L++ S D TL + + E + + + GH + V
Sbjct: 177 KLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDL-LEGRLIYTLQGHTGPVFTVS 235
Query: 468 FSPDGRIIASASFDKSIKLW 487
FS G + AS D + LW
Sbjct: 236 FSKGGELFASGGADTQVLLW 255
Score = 165 (63.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 53/199 (26%), Positives = 89/199 (44%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFW--DVTTQTPLFKCEGTPYLFYVNETEITKT 165
GH + V SV+FSP+G LAS S D TVR W D + FK P V + +
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAP----VRSVDFS-- 69
Query: 166 LADVLPLDTLNTEEVVDI--VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
AD L T + ++ + + +Y+++ ++ S+ H V KFSP+GR +
Sbjct: 70 -ADGQFLATASEDKSIKVWSMYRQRFLY----------SLYRHTHWVRCAKFSPDGRLIV 118
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S S D T++ WD T + + + + ++P + S + + WD K
Sbjct: 119 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL 178
Query: 284 IGQPMRGHKQWITALSWEP 302
+ Q + H + +S+ P
Sbjct: 179 L-QHYQVHSGGVNCISFHP 196
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 43/146 (29%), Positives = 67/146 (45%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P G + S D T+ +W+ + K L H +NC+ F P G + +AS D ++K+
Sbjct: 154 PSGTCIASAGSDQTVKVWDV-RVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKI 212
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK-------------T 533
D G+ I TL+GH V+ V++S L SG AD+ + +W
Sbjct: 213 LDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNL 272
Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKV 559
K++ D P H ++Y P EKV
Sbjct: 273 KRLHFDSPPHLLDIYPRTPHPHEEKV 298
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 49/188 (26%), Positives = 79/188 (42%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
S H V SV FS +G+ LA+ S D +++ W + Q L+ + +V + +
Sbjct: 54 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR--HTHWVRCAKFS 111
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
++ T ++ D KQ V S G A V F+P+G +A
Sbjct: 112 PDGRLIVSCSEDKTIKIWDTT-NKQCVNNF-------SDSVGFANFV---DFNPSGTCIA 160
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
S D TV+ WDV L + H V CI++ P L++ +G + D G+
Sbjct: 161 SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRL 220
Query: 284 IGQPMRGH 291
I ++GH
Sbjct: 221 I-YTLQGH 227
Score = 127 (49.8 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 43/172 (25%), Positives = 71/172 (41%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S+ H V KFSP+GR + S S D T++ WD T + +C +++
Sbjct: 97 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK----QCVNN-----FSDSVGFA 147
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
D P T D Q V+ VR V + H+ V + F P+G L +
Sbjct: 148 NFVDFNPSGTCIASAGSD---QTVKVWDVR-VNKLLQHYQVHSGGVNCISFHPSGNYLIT 203
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
S D T++ D+ ++ +GH V +++S + SG + + W
Sbjct: 204 ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 255
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 251 (93.4 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 56/150 (37%), Positives = 92/150 (61%)
Query: 427 PEGEKLVSGSDDFTLFLWN-PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIK 485
P+G+ L +G++D + +W+ + K + +GH+Q I ++F+ +GR IAS S DK+++
Sbjct: 326 PDGKYLATGAEDKQIRVWDIATRTIKHI--FSGHEQDIYSLDFAGNGRYIASGSGDKTVR 383
Query: 486 LWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL--P-G 542
LWD GK + TL V VA S D + +GS D T++VW+ T + + L P G
Sbjct: 384 LWDIAEGKLVYTLSIE-DGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDG 442
Query: 543 HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
H D VY+V +AP+G+++ SG DK ++LW+
Sbjct: 443 HKDSVYSVAFAPNGKELVSGSLDKTIKLWE 472
Score = 237 (88.5 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 70/230 (30%), Positives = 111/230 (48%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT-PYLFYVNETEITKTL 166
GH + + S+ F+ NGR +ASGSGD TVR WD+ EG Y + + T +
Sbjct: 356 GHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIA--------EGKLVYTLSIEDGVTTVAM 407
Query: 167 A-DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG 225
+ D L + + ++ V V+ + V + + GH ++V SV F+PNG+ L SG
Sbjct: 408 SPDGLYVAAGSLDKTVR-VWDTTTGYLVERL----ENPDGHKDSVYSVAFAPNGKELVSG 462
Query: 226 SGDTTVRFWDVTTQTPLF-------KC----EGHKHWVLCIAWSPDSKQLVSGCKNGVIH 274
S D T++ W++ + KC EGHK +VL + +PD ++SG K+ +
Sbjct: 463 SLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQ 522
Query: 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
WD TG ++GHK + +++ P FA+ D RIW
Sbjct: 523 FWDPITGNA-QMMLQGHKNSVISVAPSPTG-----NLFATGSGDMRARIW 566
Score = 223 (83.6 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 78/268 (29%), Positives = 125/268 (46%)
Query: 115 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDT 174
SV FSP+G+ LA+G+ D +R WD+ T+T K ++F +E +I D
Sbjct: 321 SVCFSPDGKYLATGAEDKQIRVWDIATRT--IK-----HIFSGHEQDIYSL--DFAGNGR 371
Query: 175 LNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFW 234
D + + + + V T S+ + V +V SP+G +A+GS D TVR W
Sbjct: 372 YIASGSGDKTVRLWDIAEGKLVY--TLSIE---DGVTTVAMSPDGLYVAAGSLDKTVRVW 426
Query: 235 DVTTQTPLFKCE---GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD--------SSTGK- 282
D TT + + E GHK V +A++P+ K+LVSG + I W+ +S GK
Sbjct: 427 DTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKG 486
Query: 283 -QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341
+ + GHK ++ ++ P H S KD ++ WD I +L H S
Sbjct: 487 GKCHRTFEGHKDFVLSVCLTPD--GHWVM---SGSKDRGVQFWDPITGNAQMMLQGHKNS 541
Query: 342 VTCIRWGGSGLIYSA-SQDRTIKVWRAS 368
V + +G +++ S D ++WR S
Sbjct: 542 VISVAPSPTGNLFATGSGDMRARIWRYS 569
Score = 216 (81.1 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 81/308 (26%), Positives = 138/308 (44%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--QTPLFKCEG-HKH---WVLCIAWSP 259
H V V+FS +G+ LA+G + + + +DVT + + E K ++ + +SP
Sbjct: 268 HDSVVCCVRFSRDGKYLATGC-NRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSP 326
Query: 260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG 319
D K L +G ++ I WD +T + I GH+Q I +L F N R AS D
Sbjct: 327 DGKYLATGAEDKQIRVWDIAT-RTIKHIFSGHEQDIYSLD---FAGNG--RYIASGSGDK 380
Query: 320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSA-SQDRTIKVWRASDGVMCRTLE- 377
+R+WD+ + V L+ VT + GL +A S D+T++VW + G + LE
Sbjct: 381 TVRLWDIAEGKLVYTLSIED-GVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLEN 439
Query: 378 --GHAHWVNTLAL----------STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ-- 423
GH V ++A S D +++ + +Y+ A ++
Sbjct: 440 PDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDF 499
Query: 424 --AQC--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
+ C P+G ++SGS D + W+P + + GH+ + V SP G + A+ S
Sbjct: 500 VLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMM-LQGHKNSVISVAPSPTGNLFATGS 558
Query: 480 FDKSIKLW 487
D ++W
Sbjct: 559 GDMRARIW 566
Score = 200 (75.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 49/163 (30%), Positives = 90/163 (55%)
Query: 419 LAKYQAQ-CPEGEKLVSGSDDFTLFLWNPEKEKK---SLARMTGHQQLINCVEFSPDGRI 474
LA + + P +K G D + +F NPE ++ L H ++ CV FS DG+
Sbjct: 227 LANWNPEDLPPSQKK-EGVDWYAVF--NPEVQRVLDVELVHHLVHDSVVCCVRFSRDGKY 283
Query: 475 IASASFDKSIKLWDGRIGKFITTLRGH-VQA---VYM--VAWSSDSRLLVSGSADSTLKV 528
+A+ ++S +++D +G+ + L+ V +Y+ V +S D + L +G+ D ++V
Sbjct: 284 LATGC-NRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSPDGKYLATGAEDKQIRV 342
Query: 529 WNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
W++ T+ I+ GH ++Y++D+A +G +ASG DK +RLW
Sbjct: 343 WDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLW 385
Score = 196 (74.1 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 63/218 (28%), Positives = 104/218 (47%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH + + S+ F+ NGR +ASGSGD TVR WD+ + L + V +A SPD +
Sbjct: 356 GHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIA-EGKLVYTLSIEDGVTTVAMSPDGLYV 414
Query: 265 VSGCKNGVIHAWDSSTG---KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+G + + WD++TG +++ P GHK + ++++ P N + S D I
Sbjct: 415 AAGSLDKTVRVWDTTTGYLVERLENP-DGHKDSVYSVAFAP---NG--KELVSGSLDKTI 468
Query: 322 RIWDVIL-----------SQCVRVLTSHTRSV--TCIRWGGSGLIYSASQDRTIKVWRAS 368
++W++ L +C R H V C+ G ++ S S+DR ++ W
Sbjct: 469 KLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVM-SGSKDRGVQFWDPI 527
Query: 369 DGVMCRTLEGHAHWVNTLALS-TDYLMRVEATSTGGFK 405
G L+GH + V ++A S T L AT +G +
Sbjct: 528 TGNAQMMLQGHKNSVISVAPSPTGNLF---ATGSGDMR 562
Score = 193 (73.0 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 50/162 (30%), Positives = 79/162 (48%)
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEK--KSLARMTGHQQLINCVEFSPDGRIIASASFD 481
A P+G + +GS D T+ +W+ + L GH+ + V F+P+G+ + S S D
Sbjct: 406 AMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLD 465
Query: 482 KSIKLWD-----------GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
K+IKLW+ G+ GK T GH V V + D ++SGS D ++ W+
Sbjct: 466 KTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWD 525
Query: 531 MKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
T + L GH + V +V +P G A+G D R+W+
Sbjct: 526 PITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIWR 567
Score = 184 (69.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 39/109 (35%), Positives = 61/109 (55%)
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
I V FSPDG+ +A+ + DK I++WD GH Q +Y + ++ + R + SGS
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSG 378
Query: 523 DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
D T+++W++ K+ L D V V +PDG VA+G DK +R+W
Sbjct: 379 DKTVRLWDIAEGKLVYTLSIE-DGVTTVAMSPDGLYVAAGSLDKTVRVW 426
Score = 173 (66.0 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 54/188 (28%), Positives = 84/188 (44%)
Query: 353 IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE 412
++ ++ + + DGV + +V A S D +RV T+TG NP+
Sbjct: 384 LWDIAEGKLVYTLSIEDGVTTVAMSPDGLYV--AAGSLDKTVRVWDTTTGYLVERLENPD 441
Query: 413 ESSKHALAKYQ-AQCPEGEKLVSGSDDFTLFLWN---PEKEKKSLAR-------MTGHQQ 461
H + Y A P G++LVSGS D T+ LW P ++ S + GH+
Sbjct: 442 G---HKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKD 498
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
+ V +PDG + S S D+ ++ WD G L+GH +V VA S L +GS
Sbjct: 499 FVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGS 558
Query: 522 ADSTLKVW 529
D ++W
Sbjct: 559 GDMRARIW 566
Score = 171 (65.3 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 49/175 (28%), Positives = 80/175 (45%)
Query: 111 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTP-YLFYVNETEITKTLADV 169
+ V +V SP+G +A+GS D TVR WD TT + + E + V ++
Sbjct: 400 DGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKEL 459
Query: 170 LPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDT 229
+ T ++ ++ +Q +C + GH + V+SV +P+G + SGS D
Sbjct: 460 VSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDR 519
Query: 230 TVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS--TGK 282
V+FWD T +GHK+ V+ +A SP +G + W S TG+
Sbjct: 520 GVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIWRYSAYTGR 574
Score = 52 (23.4 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 140
H V V+FS +G+ LA+G + + + +DVT
Sbjct: 268 HDSVVCCVRFSRDGKYLATGC-NRSAQIFDVT 298
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 257 (95.5 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 64/233 (27%), Positives = 121/233 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + + S +D +I+IWD +C++VLT HT SV C+++ +I + S D T++V
Sbjct: 214 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRV 272
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G + TL H V L S ++ + +D A+ + + + L ++
Sbjct: 273 WDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAV-WDMASATDITLRRVLVGHR 331
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +W+ + + + GH++ I C+++ R++ S S
Sbjct: 332 AAVNVVDFDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 388
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW+++
Sbjct: 389 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 439
Score = 242 (90.2 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 80/299 (26%), Positives = 138/299 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D ++++SG ++ I WD T + + + GH + L ++ R
Sbjct: 211 VYCLQY--DDEKIISGLRDNSIKIWDK-TSLECLKVLTGHTGSVLCLQYDE-------RV 260
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW---RAS 368
+ D +R+WDV + + L H +V +R+ +GL+ + S+DR+I VW A+
Sbjct: 261 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTCSKDRSIAVWDMASAT 319
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLM--------RVEATSTGGFKYDPANPEESSKHALA 420
D + R L GH VN + Y++ +V +TST F K +A
Sbjct: 320 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEF----VRTLNGHKRGIA 375
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++
Sbjct: 376 CLQYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAY 429
Query: 481 DKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
D IK+WD + + TL H V+ + + D ++S S D T+ +W+
Sbjct: 430 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 486
Score = 229 (85.7 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 66/248 (26%), Positives = 125/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q ++ + +++ V C+++ +I S +D +IK+W + + L GH V L L
Sbjct: 199 QRIQCRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQ 255
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + V +S + N E H A + G +V+ S D ++ +W+
Sbjct: 256 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-LMVTCSKDRSIAVWD 314
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W +F+ TL GH +
Sbjct: 315 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 372
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 373 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 428
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 429 YDGKIKVW 436
Score = 219 (82.2 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV T L H VL + +S
Sbjct: 240 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 297
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S+T + + + GH+ + + ++ ++ ++SG
Sbjct: 298 --NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 349
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 350 -DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 407
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 408 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 465
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + ++S S D T+ +W+
Sbjct: 466 LQFDEFQ-IISSSHDDTILIWD 486
Score = 198 (74.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 73/282 (25%), Positives = 127/282 (45%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+ SG D +++ WD T+ L GH VLC+ + D + +V+G + + WD +TG
Sbjct: 221 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTG 278
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSH 338
+ + + H + + HL + KD +I +WD+ + + RVL H
Sbjct: 279 EVLNTLIH-HNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 330
Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
+V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 331 RAAVNVVDFDDKYIV-SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLV-VSG 387
Query: 399 TSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------PEK 448
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 388 SSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 446
Query: 449 EKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F + +II+S S D +I +WD
Sbjct: 447 PASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWD 486
Score = 152 (58.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 50/182 (27%), Positives = 83/182 (45%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C + GH +V+ +++ R + +GS D+TVR WDV T L T L + NE
Sbjct: 240 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVL----NT--LIHHNEAV 291
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS--MPGHAEAVISVKFSPNG 219
+ ++ L + T + + + AV+ + T T + GH AV V F +
Sbjct: 292 LHLRFSNGLMV-TCSKDRSI-------AVWDMASATDITLRRVLVGHRAAVNVVDF--DD 341
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + S SGD T++ W +T + GHK + C+ + + +VSG + I WD
Sbjct: 342 KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 399
Query: 280 TG 281
G
Sbjct: 400 CG 401
Score = 144 (55.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 366 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 421
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 422 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDT 481
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 482 ILIWDFL 488
Score = 52 (23.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 125 LASGSGDTTVRFWDVTTQTPLFKCEGTP----YLFYVNETEITKTLADVLPLDTLNTEEV 180
+ SG D +++ WD T+ L G L Y +T + + + +NT EV
Sbjct: 221 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEV 280
Query: 181 VD-IVYQKQAVFQVR 194
++ +++ +AV +R
Sbjct: 281 LNTLIHHNEAVLHLR 295
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 257 (95.5 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 64/233 (27%), Positives = 121/233 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + + S +D +I+IWD +C++VLT HT SV C+++ +I + S D T++V
Sbjct: 214 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRV 272
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G + TL H V L S ++ + +D A+ + + + L ++
Sbjct: 273 WDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAV-WDMASATDITLRRVLVGHR 331
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +W+ + + + GH++ I C+++ R++ S S
Sbjct: 332 AAVNVVDFDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 388
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW+++
Sbjct: 389 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 439
Score = 242 (90.2 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 80/299 (26%), Positives = 138/299 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D ++++SG ++ I WD T + + + GH + L ++ R
Sbjct: 211 VYCLQY--DDEKIISGLRDNSIKIWDK-TSLECLKVLTGHTGSVLCLQYDE-------RV 260
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW---RAS 368
+ D +R+WDV + + L H +V +R+ +GL+ + S+DR+I VW A+
Sbjct: 261 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTCSKDRSIAVWDMASAT 319
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLM--------RVEATSTGGFKYDPANPEESSKHALA 420
D + R L GH VN + Y++ +V +TST F K +A
Sbjct: 320 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEF----VRTLNGHKRGIA 375
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++
Sbjct: 376 CLQYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAY 429
Query: 481 DKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
D IK+WD + + TL H V+ + + D ++S S D T+ +W+
Sbjct: 430 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 486
Score = 229 (85.7 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 66/248 (26%), Positives = 125/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q ++ + +++ V C+++ +I S +D +IK+W + + L GH V L L
Sbjct: 199 QRIQCRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQ 255
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + V +S + N E H A + G +V+ S D ++ +W+
Sbjct: 256 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-LMVTCSKDRSIAVWD 314
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W +F+ TL GH +
Sbjct: 315 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 372
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 373 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 428
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 429 YDGKIKVW 436
Score = 219 (82.2 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV T L H VL + +S
Sbjct: 240 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 297
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S+T + + + GH+ + + ++ ++ ++SG
Sbjct: 298 --NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 349
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 350 -DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 407
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 408 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 465
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + ++S S D T+ +W+
Sbjct: 466 LQFDEFQ-IISSSHDDTILIWD 486
Score = 198 (74.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 73/282 (25%), Positives = 127/282 (45%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+ SG D +++ WD T+ L GH VLC+ + D + +V+G + + WD +TG
Sbjct: 221 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTG 278
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSH 338
+ + + H + + HL + KD +I +WD+ + + RVL H
Sbjct: 279 EVLNTLIH-HNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 330
Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
+V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 331 RAAVNVVDFDDKYIV-SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLV-VSG 387
Query: 399 TSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------PEK 448
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 388 SSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 446
Query: 449 EKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F + +II+S S D +I +WD
Sbjct: 447 PASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWD 486
Score = 152 (58.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 50/182 (27%), Positives = 83/182 (45%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C + GH +V+ +++ R + +GS D+TVR WDV T L T L + NE
Sbjct: 240 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVL----NT--LIHHNEAV 291
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS--MPGHAEAVISVKFSPNG 219
+ ++ L + T + + + AV+ + T T + GH AV V F +
Sbjct: 292 LHLRFSNGLMV-TCSKDRSI-------AVWDMASATDITLRRVLVGHRAAVNVVDF--DD 341
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + S SGD T++ W +T + GHK + C+ + + +VSG + I WD
Sbjct: 342 KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 399
Query: 280 TG 281
G
Sbjct: 400 CG 401
Score = 144 (55.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 366 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 421
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 422 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDT 481
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 482 ILIWDFL 488
Score = 52 (23.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 125 LASGSGDTTVRFWDVTTQTPLFKCEGTP----YLFYVNETEITKTLADVLPLDTLNTEEV 180
+ SG D +++ WD T+ L G L Y +T + + + +NT EV
Sbjct: 221 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEV 280
Query: 181 VD-IVYQKQAVFQVR 194
++ +++ +AV +R
Sbjct: 281 LNTLIHHNEAVLHLR 295
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 257 (95.5 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 64/233 (27%), Positives = 121/233 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + + S +D +I+IWD +C++VLT HT SV C+++ +I + S D T++V
Sbjct: 233 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRV 291
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G + TL H V L S ++ + +D A+ + + + L ++
Sbjct: 292 WDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAV-WDMASATDITLRRVLVGHR 350
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +W+ + + + GH++ I C+++ R++ S S
Sbjct: 351 AAVNVVDFDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 407
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW+++
Sbjct: 408 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 458
Score = 242 (90.2 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 80/299 (26%), Positives = 138/299 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D ++++SG ++ I WD T + + + GH + L ++ R
Sbjct: 230 VYCLQY--DDEKIISGLRDNSIKIWDK-TSLECLKVLTGHTGSVLCLQYDE-------RV 279
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW---RAS 368
+ D +R+WDV + + L H +V +R+ +GL+ + S+DR+I VW A+
Sbjct: 280 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTCSKDRSIAVWDMASAT 338
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLM--------RVEATSTGGFKYDPANPEESSKHALA 420
D + R L GH VN + Y++ +V +TST F K +A
Sbjct: 339 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEF----VRTLNGHKRGIA 394
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++
Sbjct: 395 CLQYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAY 448
Query: 481 DKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
D IK+WD + + TL H V+ + + D ++S S D T+ +W+
Sbjct: 449 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 505
Score = 229 (85.7 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 66/248 (26%), Positives = 125/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q ++ + +++ V C+++ +I S +D +IK+W + + L GH V L L
Sbjct: 218 QRIQCRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQ 274
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + V +S + N E H A + G +V+ S D ++ +W+
Sbjct: 275 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-LMVTCSKDRSIAVWD 333
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W +F+ TL GH +
Sbjct: 334 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 391
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 392 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 447
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 448 YDGKIKVW 455
Score = 219 (82.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV T L H VL + +S
Sbjct: 259 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 316
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S+T + + + GH+ + + ++ ++ ++SG
Sbjct: 317 --NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 368
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 369 -DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 426
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 427 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 484
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + ++S S D T+ +W+
Sbjct: 485 LQFDEFQ-IISSSHDDTILIWD 505
Score = 198 (74.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 73/282 (25%), Positives = 127/282 (45%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+ SG D +++ WD T+ L GH VLC+ + D + +V+G + + WD +TG
Sbjct: 240 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTG 297
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSH 338
+ + + H + + HL + KD +I +WD+ + + RVL H
Sbjct: 298 EVLNTLIH-HNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 349
Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
+V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 350 RAAVNVVDFDDKYIV-SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLV-VSG 406
Query: 399 TSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------PEK 448
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 407 SSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 465
Query: 449 EKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F + +II+S S D +I +WD
Sbjct: 466 PASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWD 505
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 50/182 (27%), Positives = 83/182 (45%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C + GH +V+ +++ R + +GS D+TVR WDV T L T L + NE
Sbjct: 259 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVL----NT--LIHHNEAV 310
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS--MPGHAEAVISVKFSPNG 219
+ ++ L + T + + + AV+ + T T + GH AV V F +
Sbjct: 311 LHLRFSNGLMV-TCSKDRSI-------AVWDMASATDITLRRVLVGHRAAVNVVDF--DD 360
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + S SGD T++ W +T + GHK + C+ + + +VSG + I WD
Sbjct: 361 KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 418
Query: 280 TG 281
G
Sbjct: 419 CG 420
Score = 144 (55.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 385 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 440
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 441 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDT 500
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 501 ILIWDFL 507
Score = 52 (23.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 125 LASGSGDTTVRFWDVTTQTPLFKCEGTP----YLFYVNETEITKTLADVLPLDTLNTEEV 180
+ SG D +++ WD T+ L G L Y +T + + + +NT EV
Sbjct: 240 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEV 299
Query: 181 VD-IVYQKQAVFQVR 194
++ +++ +AV +R
Sbjct: 300 LNTLIHHNEAVLHLR 314
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 258 (95.9 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 69/230 (30%), Positives = 118/230 (51%)
Query: 335 LTSHTRSVTCIRWG-GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
+ +H +V+ + G SG L+ + D + +W + +L GH V ++ L+T
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 393 LMRVEATSTGGFK-YDPANPEESSK--HALAKYQAQ-C-----PEGEKLVSGSDDFTLFL 443
+ V + +G + +D E++K L ++A C P GE + SGS D + L
Sbjct: 76 ELIVAGSQSGSIRVWDL----EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
W+ + K + R GH Q + C+ FSPDG+ +ASA+ D ++KLWD GK ++ GH
Sbjct: 132 WDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV-YAVDW 552
V +V + + LL SGS+D T++ W+++ ++ + G V YA W
Sbjct: 191 PVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGSW 240
Score = 243 (90.6 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 53/145 (36%), Positives = 82/145 (56%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
PE E +V+GS ++ +W+ E K L + GH+ I ++F P G +AS S D +IKL
Sbjct: 74 PE-ELIVAGSQSGSIRVWDLEAAK-ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
WD R + RGH QAV + +S D + L S + D T+K+W++ K+ + PGH
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
V V++ P+ +ASG D+ +R W
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 223 (83.6 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 57/193 (29%), Positives = 92/193 (47%)
Query: 206 HAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
HA V S+ +GR LA+G D V W + + GH V + + + +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG-KDGAIRI 323
V+G ++G I WD K I + + GHK I +L + P+ F +SG +D I++
Sbjct: 79 VAGSQSGSIRVWDLEAAK-ILRTLMGHKANICSLDFHPYG------EFVASGSQDTNIKL 131
Query: 324 WDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHW 382
WD+ CV H+++V C+R+ G + SA+ D T+K+W + G M GH
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 383 VNTLALS-TDYLM 394
VN + +YL+
Sbjct: 192 VNVVEFHPNEYLL 204
Score = 221 (82.9 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 66/248 (26%), Positives = 105/248 (42%)
Query: 109 HAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
HA V S+ +GR LA+G D V W + + G + + E +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTG-----HTSPVESVR--- 70
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPV--TRCTSSMPGHAEAVISVKFSPNGRSLASG 225
LNT E + + + +V + + ++ GH + S+ F P G +ASG
Sbjct: 71 -------LNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASG 123
Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285
S DT ++ WD+ + +F+ GH V C+ +SPD K L S + + WD + GK +
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI 345
+ GH + + FH N AS D IR WD+ Q V + V
Sbjct: 184 E-FPGHTGPVNVVE---FHPNEYL--LASGSSDRTIRFWDLEKFQVVSCIEGEPGPV--- 234
Query: 346 RWGGSGLI 353
R+ GS ++
Sbjct: 235 RYAGSWVV 242
Score = 195 (73.7 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
G L +G DD + LW+ K + +TGH + V + +I + S SI++WD
Sbjct: 33 GRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVY 548
K + TL GH + + + + SGS D+ +K+W+++ K GH V
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query: 549 AVDWAPDGEKVASGGKDKVLRLW 571
+ ++PDG+ +AS D ++LW
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLW 174
Score = 161 (61.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 64/229 (27%), Positives = 103/229 (44%)
Query: 57 LFYVNETEITKTLAD-VLPLDT--LNTEEVVDIVYQKQAVFQVRPV--TRCTSSMPGHAE 111
L+ +N+ +L P+++ LNT E + + + +V + + ++ GH
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
Query: 112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTLADVL 170
+ S+ F P G +ASGS DT ++ WD+ + +F+ G + + + + K LA
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 171 PLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTT 230
D +T ++ D+ K S PGH V V+F PN LASGS D T
Sbjct: 167 D-D--HTVKLWDLTAGKMM-----------SEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 231 VRFWDVTTQTPLFKC-EGHK-------HWVLCIAWSPDSKQLVSGCKNG 271
+RFWD+ + + C EG WV + SP K V GC+ G
Sbjct: 213 IRFWDLE-KFQVVSCIEGEPGPVRYAGSWV--VGLSPPPK--VVGCRYG 256
Score = 46 (21.3 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 455 RMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
R T H +L V F+PDG + S D S++++
Sbjct: 282 RPTPHSRLPRSVLFNPDGCCLYSGCQD-SLRVY 313
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 257 (95.5 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 64/233 (27%), Positives = 121/233 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + + S +D +I+IWD +C++VLT HT SV C+++ +I + S D T++V
Sbjct: 234 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRV 292
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G + TL H V L S ++ + +D A+ + + + L ++
Sbjct: 293 WDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAV-WDMASATDITLRRVLVGHR 351
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +W+ + + + GH++ I C+++ R++ S S
Sbjct: 352 AAVNVVDFDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 408
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW+++
Sbjct: 409 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 459
Score = 242 (90.2 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 80/299 (26%), Positives = 138/299 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D ++++SG ++ I WD T + + + GH + L ++ R
Sbjct: 231 VYCLQY--DDEKIISGLRDNSIKIWDK-TSLECLKVLTGHTGSVLCLQYDE-------RV 280
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW---RAS 368
+ D +R+WDV + + L H +V +R+ +GL+ + S+DR+I VW A+
Sbjct: 281 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTCSKDRSIAVWDMASAT 339
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLM--------RVEATSTGGFKYDPANPEESSKHALA 420
D + R L GH VN + Y++ +V +TST F K +A
Sbjct: 340 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEF----VRTLNGHKRGIA 395
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++
Sbjct: 396 CLQYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAY 449
Query: 481 DKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
D IK+WD + + TL H V+ + + D ++S S D T+ +W+
Sbjct: 450 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 506
Score = 229 (85.7 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 66/248 (26%), Positives = 125/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q ++ + +++ V C+++ +I S +D +IK+W + + L GH V L L
Sbjct: 219 QRIQCRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQ 275
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + V +S + N E H A + G +V+ S D ++ +W+
Sbjct: 276 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-LMVTCSKDRSIAVWD 334
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W +F+ TL GH +
Sbjct: 335 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 392
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 393 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 448
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 449 YDGKIKVW 456
Score = 219 (82.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV T L H VL + +S
Sbjct: 260 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 317
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S+T + + + GH+ + + ++ ++ ++SG
Sbjct: 318 --NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 369
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 370 -DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 427
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 428 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 485
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + ++S S D T+ +W+
Sbjct: 486 LQFDEFQ-IISSSHDDTILIWD 506
Score = 198 (74.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 73/282 (25%), Positives = 127/282 (45%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+ SG D +++ WD T+ L GH VLC+ + D + +V+G + + WD +TG
Sbjct: 241 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTG 298
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSH 338
+ + + H + + HL + KD +I +WD+ + + RVL H
Sbjct: 299 EVLNTLIH-HNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 350
Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
+V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 351 RAAVNVVDFDDKYIV-SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLV-VSG 407
Query: 399 TSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------PEK 448
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 408 SSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 466
Query: 449 EKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F + +II+S S D +I +WD
Sbjct: 467 PASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWD 506
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 50/182 (27%), Positives = 83/182 (45%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C + GH +V+ +++ R + +GS D+TVR WDV T L T L + NE
Sbjct: 260 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVL----NT--LIHHNEAV 311
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS--MPGHAEAVISVKFSPNG 219
+ ++ L + T + + + AV+ + T T + GH AV V F +
Sbjct: 312 LHLRFSNGLMV-TCSKDRSI-------AVWDMASATDITLRRVLVGHRAAVNVVDF--DD 361
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + S SGD T++ W +T + GHK + C+ + + +VSG + I WD
Sbjct: 362 KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 419
Query: 280 TG 281
G
Sbjct: 420 CG 421
Score = 144 (55.7 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 386 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 441
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 442 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDT 501
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 502 ILIWDFL 508
Score = 52 (23.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 125 LASGSGDTTVRFWDVTTQTPLFKCEGTP----YLFYVNETEITKTLADVLPLDTLNTEEV 180
+ SG D +++ WD T+ L G L Y +T + + + +NT EV
Sbjct: 241 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEV 300
Query: 181 VD-IVYQKQAVFQVR 194
++ +++ +AV +R
Sbjct: 301 LNTLIHHNEAVLHLR 315
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 236 (88.1 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 82/304 (26%), Positives = 133/304 (43%)
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEP--- 302
GH + + W DS+ LVS ++G + WDS +T K P+R W+ ++ P
Sbjct: 9 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRS--SWVMTCAYAPSGN 66
Query: 303 F----HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ 358
F L++ C ++ ++G +R+ R L HT ++C R+ I ++S
Sbjct: 67 FVACGGLDNICSIYSLKTREGNVRV--------SRELPGHTGYLSCCRFLDDNQIITSSG 118
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANP------ 411
D T +W G GH+ V +L+L+ D V K +D +
Sbjct: 119 DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF 178
Query: 412 --EESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI---NCV 466
ES +A+A + P G +GSDD T L++ +++ L M H +I V
Sbjct: 179 IGHESDINAVAFF----PNGYAFTTGSDDATCRLFDLRADQELL--MYSHDNIICGITSV 232
Query: 467 EFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTL 526
FS GR++ + D + +WD G L GH V + + D + +GS DS L
Sbjct: 233 AFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 292
Query: 527 KVWN 530
K+WN
Sbjct: 293 KIWN 296
Score = 208 (78.3 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 75/299 (25%), Positives = 130/299 (43%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+RGH I A+ W R S+ +DG + IWD + V + + V +
Sbjct: 7 LRGHLAKIYAMHW-----GTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 61
Query: 348 GGSG-LIYSASQDRTIKVW--RASDGVM--CRTLEGHAHWVNTLALSTDYLMRVEATSTG 402
SG + D ++ + +G + R L GH +++ D + + T
Sbjct: 62 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTT 121
Query: 403 GFKYDPANPEES---SKHALAKYQAQ-CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT- 457
+D +++ + H+ P+G VSG+ D ++ LW+ + S+ R T
Sbjct: 122 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDV---RDSMCRQTF 178
Query: 458 -GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH---VQAVYMVAWSSD 513
GH+ IN V F P+G + S D + +L+D R + + + H + + VA+S
Sbjct: 179 IGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSHDNIICGITSVAFSRS 237
Query: 514 SRLLVSGSADSTLKVWN-MKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
RLL++G D +W+ MK + L GH + V + DG VA+G D L++W
Sbjct: 238 GRLLLAGYDDFNCNIWDAMKGDRAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 295
Score = 208 (78.3 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 69/303 (22%), Positives = 129/303 (42%)
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW 257
R ++ GH + ++ + + R L S S D + WD T + WV+ A+
Sbjct: 2 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 61
Query: 258 SPDSKQLVSGCKNGV--IHAWDSSTGK-QIGQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
+P + G + + I++ + G ++ + + GH +++ F ++Q S
Sbjct: 62 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCR---FLDDNQI--ITS 116
Query: 315 SGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVMC 373
SG D +WD+ Q H+ V + G + S + D +IK+W D MC
Sbjct: 117 SG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDS-MC 174
Query: 374 R-TLEGHAHWVNTLALSTD-YLMRVEATSTGGFKYDPANPEE----SSKHALAKYQ--AQ 425
R T GH +N +A + Y + +D +E S + + A
Sbjct: 175 RQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAF 234
Query: 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIK 485
G L++G DDF +W+ K ++ + GH ++C+ + DG +A+ S+D +K
Sbjct: 235 SRSGRLLLAGYDDFNCNIWDAMKGDRA-GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 293
Query: 486 LWD 488
+W+
Sbjct: 294 IWN 296
Score = 187 (70.9 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 54/208 (25%), Positives = 96/208 (46%)
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK-HAL---AKYQAQC--- 426
RTL GH + + TD + V A+ G K + ++K HA+ + + C
Sbjct: 5 RTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIPLRSSWVMTCAYA 62
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLA---RMTGHQQLINCVEFSPDGRIIASASFDKS 483
P G + G D +++ + + ++ + GH ++C F D +II S+ D +
Sbjct: 63 PSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTT 121
Query: 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
LWD G+ GH V ++ + D R VSG+ D+++K+W+++ Q GH
Sbjct: 122 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGH 181
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++ AV + P+G +G D RL+
Sbjct: 182 ESDINAVAFFPNGYAFTTGSDDATCRLF 209
Score = 180 (68.4 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 76/307 (24%), Positives = 122/307 (39%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R ++ GH + ++ + + R L S S D + WD T K P T
Sbjct: 2 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN---KVHAIPLRSSWVMT 58
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
+ + L + + I K VR V+R +PGH + +F + +
Sbjct: 59 CAYAPSGNFVACGGL--DNICSIYSLKTREGNVR-VSR---ELPGHTGYLSCCRFLDDNQ 112
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ S SGDTT WD+ T GH V+ ++ +PD + VSG + I WD
Sbjct: 113 IITS-SGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRD 171
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR 340
Q GH+ I A+++ P N F + D R++D+ Q + + +
Sbjct: 172 S-MCRQTFIGHESDINAVAFFP---NGYA--FTTGSDDATCRLFDLRADQELLMYSHDNI 225
Query: 341 --SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVE 397
+T + + SG L+ + D +W A G L GH + V+ L + TD M V
Sbjct: 226 ICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGV-TDDGMAVA 284
Query: 398 ATSTGGF 404
S F
Sbjct: 285 TGSWDSF 291
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 44/178 (24%), Positives = 71/178 (39%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
T GH+ V+S+ +P+GR+ SG+ D +++ WDV C T F +E++I
Sbjct: 133 TVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSM----CRQT---FIGHESDI 185
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAE---AVISVKFSPNG 219
P T D + +F +R M H + SV FS +G
Sbjct: 186 NAVA--FFPNGYAFTTGSDDATCR---LFDLRADQELL--MYSHDNIICGITSVAFSRSG 238
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
R L +G D WD GH + V C+ + D + +G + + W+
Sbjct: 239 RLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 296
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 257 (95.5 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 64/233 (27%), Positives = 121/233 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + + S +D +I+IWD +C++VLT HT SV C+++ +I + S D T++V
Sbjct: 246 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRV 304
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G + TL H V L S ++ + +D A+ + + + L ++
Sbjct: 305 WDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAV-WDMASATDITLRRVLVGHR 363
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +W+ + + + GH++ I C+++ R++ S S
Sbjct: 364 AAVNVVDFDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 420
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW+++
Sbjct: 421 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 471
Score = 242 (90.2 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 80/299 (26%), Positives = 138/299 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D ++++SG ++ I WD T + + + GH + L ++ R
Sbjct: 243 VYCLQY--DDEKIISGLRDNSIKIWDK-TSLECLKVLTGHTGSVLCLQYDE-------RV 292
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW---RAS 368
+ D +R+WDV + + L H +V +R+ +GL+ + S+DR+I VW A+
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTCSKDRSIAVWDMASAT 351
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLM--------RVEATSTGGFKYDPANPEESSKHALA 420
D + R L GH VN + Y++ +V +TST F K +A
Sbjct: 352 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEF----VRTLNGHKRGIA 407
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++
Sbjct: 408 CLQYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAY 461
Query: 481 DKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
D IK+WD + + TL H V+ + + D ++S S D T+ +W+
Sbjct: 462 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 518
Score = 229 (85.7 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 66/248 (26%), Positives = 125/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q ++ + +++ V C+++ +I S +D +IK+W + + L GH V L L
Sbjct: 231 QRIQCRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQ 287
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + V +S + N E H A + G +V+ S D ++ +W+
Sbjct: 288 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-LMVTCSKDRSIAVWD 346
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W +F+ TL GH +
Sbjct: 347 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 404
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 405 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 460
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 461 YDGKIKVW 468
Score = 219 (82.2 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV T L H VL + +S
Sbjct: 272 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 329
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S+T + + + GH+ + + ++ ++ ++SG
Sbjct: 330 --NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 381
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 382 -DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 439
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 440 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 497
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + ++S S D T+ +W+
Sbjct: 498 LQFDEFQ-IISSSHDDTILIWD 518
Score = 198 (74.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 73/282 (25%), Positives = 127/282 (45%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+ SG D +++ WD T+ L GH VLC+ + D + +V+G + + WD +TG
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTG 310
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSH 338
+ + + H + + HL + KD +I +WD+ + + RVL H
Sbjct: 311 EVLNTLIH-HNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 362
Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
+V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 363 RAAVNVVDFDDKYIV-SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLV-VSG 419
Query: 399 TSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------PEK 448
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 420 SSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 478
Query: 449 EKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F + +II+S S D +I +WD
Sbjct: 479 PASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWD 518
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 50/182 (27%), Positives = 83/182 (45%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C + GH +V+ +++ R + +GS D+TVR WDV T L T L + NE
Sbjct: 272 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVL----NT--LIHHNEAV 323
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS--MPGHAEAVISVKFSPNG 219
+ ++ L + T + + + AV+ + T T + GH AV V F +
Sbjct: 324 LHLRFSNGLMV-TCSKDRSI-------AVWDMASATDITLRRVLVGHRAAVNVVDF--DD 373
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + S SGD T++ W +T + GHK + C+ + + +VSG + I WD
Sbjct: 374 KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 431
Query: 280 TG 281
G
Sbjct: 432 CG 433
Score = 144 (55.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 398 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 453
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 454 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDT 513
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 514 ILIWDFL 520
Score = 52 (23.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 125 LASGSGDTTVRFWDVTTQTPLFKCEGTP----YLFYVNETEITKTLADVLPLDTLNTEEV 180
+ SG D +++ WD T+ L G L Y +T + + + +NT EV
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEV 312
Query: 181 VD-IVYQKQAVFQVR 194
++ +++ +AV +R
Sbjct: 313 LNTLIHHNEAVLHLR 327
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 257 (95.5 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 64/233 (27%), Positives = 121/233 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + + S +D +I+IWD +C++VLT HT SV C+++ +I + S D T++V
Sbjct: 246 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRV 304
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G + TL H V L S ++ + +D A+ + + + L ++
Sbjct: 305 WDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAV-WDMASATDITLRRVLVGHR 363
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +W+ + + + GH++ I C+++ R++ S S
Sbjct: 364 AAVNVVDFDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 420
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW+++
Sbjct: 421 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 471
Score = 242 (90.2 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 80/299 (26%), Positives = 138/299 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D ++++SG ++ I WD T + + + GH + L ++ R
Sbjct: 243 VYCLQY--DDEKIISGLRDNSIKIWDK-TSLECLKVLTGHTGSVLCLQYDE-------RV 292
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW---RAS 368
+ D +R+WDV + + L H +V +R+ +GL+ + S+DR+I VW A+
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTCSKDRSIAVWDMASAT 351
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLM--------RVEATSTGGFKYDPANPEESSKHALA 420
D + R L GH VN + Y++ +V +TST F K +A
Sbjct: 352 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEF----VRTLNGHKRGIA 407
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++
Sbjct: 408 CLQYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAY 461
Query: 481 DKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
D IK+WD + + TL H V+ + + D ++S S D T+ +W+
Sbjct: 462 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 518
Score = 229 (85.7 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 66/248 (26%), Positives = 125/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q ++ + +++ V C+++ +I S +D +IK+W + + L GH V L L
Sbjct: 231 QRIQCRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQ 287
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + V +S + N E H A + G +V+ S D ++ +W+
Sbjct: 288 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-LMVTCSKDRSIAVWD 346
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W +F+ TL GH +
Sbjct: 347 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 404
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 405 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 460
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 461 YDGKIKVW 468
Score = 219 (82.2 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV T L H VL + +S
Sbjct: 272 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 329
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S+T + + + GH+ + + ++ ++ ++SG
Sbjct: 330 --NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 381
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 382 -DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 439
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 440 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 497
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + ++S S D T+ +W+
Sbjct: 498 LQFDEFQ-IISSSHDDTILIWD 518
Score = 198 (74.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 73/282 (25%), Positives = 127/282 (45%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+ SG D +++ WD T+ L GH VLC+ + D + +V+G + + WD +TG
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTG 310
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSH 338
+ + + H + + HL + KD +I +WD+ + + RVL H
Sbjct: 311 EVLNTLIH-HNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 362
Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
+V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 363 RAAVNVVDFDDKYIV-SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLV-VSG 419
Query: 399 TSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------PEK 448
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 420 SSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 478
Query: 449 EKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F + +II+S S D +I +WD
Sbjct: 479 PASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWD 518
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 50/182 (27%), Positives = 83/182 (45%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C + GH +V+ +++ R + +GS D+TVR WDV T L T L + NE
Sbjct: 272 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVL----NT--LIHHNEAV 323
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS--MPGHAEAVISVKFSPNG 219
+ ++ L + T + + + AV+ + T T + GH AV V F +
Sbjct: 324 LHLRFSNGLMV-TCSKDRSI-------AVWDMASATDITLRRVLVGHRAAVNVVDF--DD 373
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + S SGD T++ W +T + GHK + C+ + + +VSG + I WD
Sbjct: 374 KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 431
Query: 280 TG 281
G
Sbjct: 432 CG 433
Score = 144 (55.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 398 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 453
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 454 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDT 513
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 514 ILIWDFL 520
Score = 52 (23.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 125 LASGSGDTTVRFWDVTTQTPLFKCEGTP----YLFYVNETEITKTLADVLPLDTLNTEEV 180
+ SG D +++ WD T+ L G L Y +T + + + +NT EV
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEV 312
Query: 181 VD-IVYQKQAVFQVR 194
++ +++ +AV +R
Sbjct: 313 LNTLIHHNEAVLHLR 327
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 227 (85.0 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 46/145 (31%), Positives = 75/145 (51%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P G VSG D LW + + L GH + C F P+ +A+ S D++++L
Sbjct: 551 PFGYYFVSGGHDRVARLWATD-HYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRL 609
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
WD G + GH ++ +A+S + + L SGS D + +W++ + +L GH
Sbjct: 610 WDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGT 669
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
+YA+ ++ DGE +ASG D +RLW
Sbjct: 670 IYALKFSRDGEIIASGSIDNTVRLW 694
Score = 224 (83.9 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 60/191 (31%), Positives = 89/191 (46%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH+ V V FSP+ L S S D T+R W + T T L +GH + V +SP
Sbjct: 497 GHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYF 556
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMR---GHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
VSG + V W +T QP+R GH +T + P + N+ A+ D +
Sbjct: 557 VSGGHDRVARLW--ATDHY--QPLRIFAGHLADVTCTRFHP-NSNY----VATGSSDRTV 607
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHA 380
R+WDV+ CVR+ T H + + + +G + S S D + +W G+M L+GH
Sbjct: 608 RLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHT 667
Query: 381 HWVNTLALSTD 391
+ L S D
Sbjct: 668 GTIYALKFSRD 678
Score = 222 (83.2 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 68/220 (30%), Positives = 98/220 (44%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH+ V V FSP+ L S S D T+R W + T T L +G Y + +T+ +
Sbjct: 497 GHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVW--DTQFS---- 550
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
P D V + A +P+ GH V +F PN +A+GS
Sbjct: 551 ---PFGYYFVSGGHDRVARLWATDHYQPLR----IFAGHLADVTCTRFHPNSNYVATGSS 603
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
D TVR WDV + GHK + +A+SP+ K L SG +G + WD G I +
Sbjct: 604 DRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAE- 662
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI 327
++GH I AL + + AS D +R+WDV+
Sbjct: 663 LKGHTGTIYALKF-----SRDGEIIASGSIDNTVRLWDVM 697
Score = 197 (74.4 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 68/249 (27%), Positives = 101/249 (40%)
Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK-QI 284
S D R D T + GH V +++SPD L+S ++G I W T +
Sbjct: 476 SDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLV 535
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
G + W T S PF F S G D R+W Q +R+ H VTC
Sbjct: 536 GYKGHNYPVWDTQFS--PFGYY-----FVSGGHDRVARLWATDHYQPLRIFAGHLADVTC 588
Query: 345 IRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG 403
R+ S + + S DRT+++W +G R GH +++LA S + ++ G
Sbjct: 589 TRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGR 648
Query: 404 -FKYDPANP---EESSKHALAKYQAQCP-EGEKLVSGSDDFTLFLWN-----PEKEKKSL 453
+D + E H Y + +GE + SGS D T+ LW+ + E
Sbjct: 649 VLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVMRAIDDVETDDF 708
Query: 454 ARMTGHQQL 462
TGH L
Sbjct: 709 TAATGHIHL 717
Score = 183 (69.5 bits), Expect = 9.6e-14, Sum P(3) = 9.6e-14
Identities = 36/105 (34%), Positives = 60/105 (57%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P + +GS D T+ LW+ + TGH+ I+ + FSP+G+ +AS S D + L
Sbjct: 593 PNSNYVATGSSDRTVRLWDV-LNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLL 651
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
WD G I L+GH +Y + +S D ++ SGS D+T+++W++
Sbjct: 652 WDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 173 (66.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 58/250 (23%), Positives = 111/250 (44%)
Query: 325 DVILSQCVRVLTSHTRSVTCIRW-GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
+ + S C + + +T + + S LI D T++VW + + R ++ A +
Sbjct: 412 ETLPSICFYTFLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKL-RKVKSAAD-L 469
Query: 384 NTLAL-STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ-CPEGEKLVSGSDDFTL 441
N + S D L R+ T + + H+ Y P+ L+S S+D T+
Sbjct: 470 NLIDKESDDVLERIMDEKTS------SESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTI 523
Query: 442 FLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH 501
LW+ + L GH + +FSP G S D+ +LW + + GH
Sbjct: 524 RLWSLQTFT-CLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGH 582
Query: 502 VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS 561
+ V + +S + +GS+D T+++W++ + GH ++++ ++P+G+ +AS
Sbjct: 583 LADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLAS 642
Query: 562 GGKDKVLRLW 571
G D + LW
Sbjct: 643 GSTDGRVLLW 652
Score = 151 (58.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 48/176 (27%), Positives = 68/176 (38%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C GH V +FSP G SG D R W PL G +L V T
Sbjct: 533 CLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAG--HLADVTCTR 590
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
V + T + D++ C GH + S+ FSPNG+
Sbjct: 591 FHPNSNYVATGSSDRTVRLWDVLNGN-----------CVRIFTGHKGPIHSLAFSPNGKF 639
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
LASGS D V WD+ + + +GH + + +S D + + SG + + WD
Sbjct: 640 LASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWD 695
Score = 81 (33.6 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 73 LPLDTLNTEEVVD-IVYQKQAVFQVR--PVTR---CTSSMPGHAEAVISVKFSPNGRSLA 126
+PL L + +D I+Y K++ ++R P T C + + + +V F+ + +A
Sbjct: 383 IPLPELKDSDKLDKIMYMKESTKRIRLGPETLPSICFYTFLNAYQGLTAVDFTDDSSLIA 442
Query: 127 SGSGDTTVRFWDVT 140
G D+TVR W VT
Sbjct: 443 GGFADSTVRVWSVT 456
Score = 81 (33.6 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 170 LPLDTLNTEEVVD-IVYQKQAVFQVR--PVTR---CTSSMPGHAEAVISVKFSPNGRSLA 223
+PL L + +D I+Y K++ ++R P T C + + + +V F+ + +A
Sbjct: 383 IPLPELKDSDKLDKIMYMKESTKRIRLGPETLPSICFYTFLNAYQGLTAVDFTDDSSLIA 442
Query: 224 SGSGDTTVRFWDVT 237
G D+TVR W VT
Sbjct: 443 GGFADSTVRVWSVT 456
Score = 39 (18.8 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 138 DVTTQTPLFKCEGTPYLFYVNETEITKTLADVL 170
DV+ + +G P L+ V +++ K + VL
Sbjct: 153 DVSVVLSAYSQQGDPSLYKVYYSDLKKFIESVL 185
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 256 (95.2 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 65/234 (27%), Positives = 122/234 (52%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTI-K 363
L + + S +D +I+IWD +C++VLT HT SV C+++ +I + S D T+ +
Sbjct: 226 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVSR 284
Query: 364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKY 422
VW + G + TL H V L S ++ + +D A+P + + + L +
Sbjct: 285 VWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAV-WDMASPTDITLRRVLVGH 343
Query: 423 QAQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
+A + + +VS S D T+ +W+ + + + GH++ I C+++ R++ S
Sbjct: 344 RAAVNVVDFDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRD--RLVVSG 400
Query: 479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
S D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW+++
Sbjct: 401 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 452
Score = 229 (85.7 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 64/247 (25%), Positives = 125/247 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q ++ + +++ V C+++ +I S +D +IK+W + + L GH V L
Sbjct: 211 QRIQCRSENSKGVYCLQYDDEKII-SGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD 269
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK---HALAKYQAQCPEGEKLVSGSDDFTLFLWNP 446
++ + ST +D E + H A + G +V+ S D ++ +W+
Sbjct: 270 ERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-LMVTCSKDRSIAVWDM 328
Query: 447 EKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
+L R + GH+ +N V+F D + I SAS D++IK+W +F+ TL GH +
Sbjct: 329 ASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG 386
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK 564
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 387 IACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAY 442
Query: 565 DKVLRLW 571
D +++W
Sbjct: 443 DGKIKVW 449
Score = 229 (85.7 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 81/300 (27%), Positives = 138/300 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D ++++SG ++ I WD T + + + GH + L ++ R
Sbjct: 223 VYCLQY--DDEKIISGLRDNSIKIWDK-TSLECLKVLTGHTGSVLCLQYDE-------RV 272
Query: 312 FASSGKDGAI-RIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW-RAS- 368
+ D + R+WDV + + L H +V +R+ +GL+ + S+DR+I VW AS
Sbjct: 273 IVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTCSKDRSIAVWDMASP 331
Query: 369 -DGVMCRTLEGHAHWVNTLALSTDYLM--------RVEATSTGGFKYDPANPEESSKHAL 419
D + R L GH VN + Y++ +V +TST F K +
Sbjct: 332 TDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEF----VRTLNGHKRGI 387
Query: 420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S +
Sbjct: 388 ACLQYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGA 441
Query: 480 FDKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
+D IK+WD + + TL H V+ + + D ++S S D T+ +W+
Sbjct: 442 YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 499
Score = 187 (70.9 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 73/283 (25%), Positives = 126/283 (44%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVI-HAWDSST 280
+ SG D +++ WD T+ L GH VLC+ + D + +V+G + + WD +T
Sbjct: 233 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVSRVWDVNT 290
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTS 337
G+ + + H + + HL + KD +I +WD+ + RVL
Sbjct: 291 GEVLNTLIH-HNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVG 342
Query: 338 HTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVE 397
H +V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 343 HRAAVNVVDFDDKYIV-SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLV-VS 399
Query: 398 ATSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------PE 447
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 400 GSSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPR 458
Query: 448 KEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F + +II+S S D +I +WD
Sbjct: 459 APASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWD 499
Score = 157 (60.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 58/222 (26%), Positives = 95/222 (42%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H EAV+ ++FS NG + + S D ++ WD+ + T + T V + +
Sbjct: 300 HNEAVLHLRFS-NGL-MVTCSKDRSIAVWDMASPTDI-----TLRRVLVGH----RAAVN 348
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRC--TSSMPGHAEAVISVKFSPNGRSLASGS 226
V+ D + +V + +V + C ++ GH + +++ R + SGS
Sbjct: 349 VVDFDD---KYIVSASGDR--TIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGS 401
Query: 227 GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ 286
D T+R WD+ L EGH+ V CI + D+K++VSG +G I WD
Sbjct: 402 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRA 459
Query: 287 PMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI 327
P + + S F L + SS D I IWD +
Sbjct: 460 PASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFL 501
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 50/183 (27%), Positives = 83/183 (45%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTV-RFWDVTTQTPLFKCEGTPYLFYVNET 160
C + GH +V+ +++ R + +GS D+TV R WDV T L T L + NE
Sbjct: 252 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVSRVWDVNTGEVL----NT--LIHHNEA 303
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS--MPGHAEAVISVKFSPN 218
+ ++ L + T + + + AV+ + T T + GH AV V F +
Sbjct: 304 VLHLRFSNGLMV-TCSKDRSI-------AVWDMASPTDITLRRVLVGHRAAVNVVDF--D 353
Query: 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS 278
+ + S SGD T++ W +T + GHK + C+ + + +VSG + I WD
Sbjct: 354 DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 411
Query: 279 STG 281
G
Sbjct: 412 ECG 414
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 187 (70.9 bits), Expect = 6.7e-19, Sum P(2) = 6.7e-19
Identities = 46/153 (30%), Positives = 80/153 (52%)
Query: 424 AQCPEGEKLVSGSDDFTLFLWN-PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK 482
A P + L +GS D T LW P + L +GH++ + CV+FSP +++A+AS D
Sbjct: 483 AVAPNDKLLATGSQDRTAKLWALPHCQL--LGIFSGHRRGLWCVQFSPMDQVLATASADG 540
Query: 483 SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVS--GSADSTLKVWNMKTKKIEQDL 540
+IKLW + + T GH +V V + S L+S +D +K+W +K + + L
Sbjct: 541 TIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSRPSGSDGLVKLWTIKNNECVKTL 600
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
H D+V+ + + ++ +G D + LW++
Sbjct: 601 DAHEDKVWGLHCSRLDDRALTGASDSCVILWKD 633
Score = 165 (63.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 61/284 (21%), Positives = 121/284 (42%)
Query: 93 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EG 150
VF+++ +T C + GH + V+++ GR AS + D ++ W + + C +G
Sbjct: 358 VFELQTMT-C-QILHGHTDIVLALDVFRKGRLFASCAKDQSICIWRMN-KAGRVACVAQG 414
Query: 151 TPYLFYVNE---TEITKTLADVLPLD-TLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPG 205
+ + V + + +T D T+ + + + K P+ + ++
Sbjct: 415 SGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPIPEALLSKGTAPDSGPILLQAQATQRC 474
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H + + SV +PN + LA+GS D T + W + L GH+ + C+ +SP + L
Sbjct: 475 HDKDINSVAVAPNDKLLATGSQDRTAKLWALPHCQLLGIFSGHRRGLWCVQFSPMDQVLA 534
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ +G I W + + GH + + + R SG DG +++W
Sbjct: 535 TASADGTIKLWALQDFSCL-KTFEGHDASVLKVVFVSRGTQLLSR---PSGSDGLVKLWT 590
Query: 326 VILSQCVRVLTSHTRSVT---CIRWGGSGLIYSASQDRTIKVWR 366
+ ++CV+ L +H V C R L + + D + +W+
Sbjct: 591 IKNNECVKTLDAHEDKVWGLHCSRLDDRAL--TGASDSCVILWK 632
Score = 152 (58.6 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 45/156 (28%), Positives = 77/156 (49%)
Query: 432 LVSGSDDFTLFLWN-PEKE-KKSLARMTG------------HQQLINCVEFSPDGRIIAS 477
LV+GS D T+ LW PE K A +G H + IN V +P+ +++A+
Sbjct: 434 LVTGSQDCTVKLWPIPEALLSKGTAPDSGPILLQAQATQRCHDKDINSVAVAPNDKLLAT 493
Query: 478 ASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE 537
S D++ KLW + + GH + ++ V +S ++L + SAD T+K+W ++
Sbjct: 494 GSQDRTAKLWALPHCQLLGIFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCL 553
Query: 538 QDLPGHGDEVYAVDWAPDGEKVAS--GGKDKVLRLW 571
+ GH V V + G ++ S G D +++LW
Sbjct: 554 KTFEGHDASVLKVVFVSRGTQLLSRPSGSDGLVKLW 589
Score = 147 (56.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 39/166 (23%), Positives = 84/166 (50%)
Query: 412 EESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG--HQQLINCVEFS 469
E+ + + ++ P+ + LV+ + L W + S+ R+ H + + F
Sbjct: 59 EQEDQEDITAFELS-PDDQVLVTATRALLLAQW--AWREGSITRLWKAIHTAPVATMAFD 115
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITT--LRGHVQAVYMVAWSSD-SRLLV-SGSADST 525
P ++A+ D ++++WD I + T RG V++V + D +RLL+ S +AD+T
Sbjct: 116 PTSTLLATGGCDGAVRVWD--IVRHYGTHHFRGSPGVVHLVTFHPDPARLLLFSSAADAT 173
Query: 526 LKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+++W+++ + + H V ++ ++ DG + S G+DK+ +W
Sbjct: 174 IRMWSLQDQSCLAVMTAHYSAVTSLTFSADGHTMLSSGRDKICVIW 219
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 80/333 (24%), Positives = 132/333 (39%)
Query: 196 VTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCI 255
+TR ++ H V ++ F P LA+G D VR WD+ G V +
Sbjct: 97 ITRLWKAI--HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLV 154
Query: 256 AWSPDSKQLV--SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFA 313
+ PD +L+ S + I W S + M H +T+L++ H
Sbjct: 155 TFHPDPARLLLFSSAADATIRMW-SLQDQSCLAVMTAHYSAVTSLTFSAD--GHT---ML 208
Query: 314 SSGKDGAIRIWDVILSQCVR---VLTSHTRSVTC-------IRWGGSGLIYSASQDR-TI 362
SSG+D IWD+ Q R V S +V + GL + + D+ +
Sbjct: 209 SSGRDKICVIWDLQSHQATRTVPVFESVEAAVLLPEELVPKLDVKSKGLHFLTAGDQGLL 268
Query: 363 KVWRASDG--VMCRTL-----EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS 415
+VW A+ G V + +G H TLA S L+ V T Y+ A +
Sbjct: 269 RVWEAASGQCVYAQPQPPGPRQGLTHC--TLAQSAGLLLSV-TTDHNLLLYE-ARSLQLQ 324
Query: 416 KHALAKYQAQC-------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
K A Y + PE +V S+ +L ++ E + + + GH ++ ++
Sbjct: 325 KQ-FAGYSEEVLDVRFLGPEDSHIVVASNSPSLKVF--ELQTMTCQILHGHTDIVLALDV 381
Query: 469 SPDGRIIASASFDKSIKLWD-GRIGKFITTLRG 500
GR+ AS + D+SI +W + G+ +G
Sbjct: 382 FRKGRLFASCAKDQSICIWRMNKAGRVACVAQG 414
Score = 134 (52.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 67/290 (23%), Positives = 121/290 (41%)
Query: 190 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC---- 245
VF+++ +T C + GH + V+++ GR AS + D ++ W + + C
Sbjct: 358 VFELQTMT-C-QILHGHTDIVLALDVFRKGRLFASCAKDQSICIWRMN-KAGRVACVAQG 414
Query: 246 EGHKHWVLCIAWSPDSKQ-LVSGCKNGVIHAW-------DSSTGKQIGQPM-------RG 290
GH H V I S + LV+G ++ + W T G + R
Sbjct: 415 SGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPIPEALLSKGTAPDSGPILLQAQATQRC 474
Query: 291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS 350
H + I +++ P N + A+ +D ++W + Q + + + H R + C+++
Sbjct: 475 HDKDINSVAVAP---NDKL--LATGSQDRTAKLWALPHCQLLGIFSGHRRGLWCVQFSPM 529
Query: 351 G-LIYSASQDRTIKVWRASDGVMCRTLEGH-AHWVNTLALS--TDYLMRVEATSTGGFKY 406
++ +AS D TIK+W D +T EGH A + + +S T L R S G K
Sbjct: 530 DQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSRPSG-SDGLVKL 588
Query: 407 DPANPEESSK----HALAKYQAQCPE-GEKLVSGSDDFTLFLWNPEKEKK 451
E K H + C ++ ++G+ D + LW E++
Sbjct: 589 WTIKNNECVKTLDAHEDKVWGLHCSRLDDRALTGASDSCVILWKDVTEEE 638
Score = 124 (48.7 bits), Expect = 6.7e-19, Sum P(2) = 6.7e-19
Identities = 89/378 (23%), Positives = 154/378 (40%)
Query: 99 VTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVN 158
+TR ++ H V ++ F P LA+G D VR WD+ G+P + ++
Sbjct: 97 ITRLWKAI--HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHL- 153
Query: 159 ETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN 218
+T D P L D + ++ ++ + C + M H AV S+ FS +
Sbjct: 154 ---VTFH-PD--PARLLLFSSAADATIR---MWSLQDQS-CLAVMTAHYSAVTSLTFSAD 203
Query: 219 GRSLASGSGDTTVRFWDV----TTQT-PLFKCEGHKHWVLC---IAWSPDSKQ-----LV 265
G ++ S D WD+ T+T P+F E + VL + D K L
Sbjct: 204 GHTMLSSGRDKICVIWDLQSHQATRTVPVF--ESVEAAVLLPEELVPKLDVKSKGLHFLT 261
Query: 266 SGCKNGVIHAWDSSTGKQI-GQPMR-GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRI 323
+G G++ W++++G+ + QP G +Q +T + L S D + +
Sbjct: 262 AG-DQGLLRVWEAASGQCVYAQPQPPGPRQGLTHCT-----LAQSAGLLLSVTTDHNLLL 315
Query: 324 WDVILSQCVRVLTSHTRSVTCIRWGG--SGLIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
++ Q + ++ V +R+ G I AS ++KV+ + C+ L GH
Sbjct: 316 YEARSLQLQKQFAGYSEEVLDVRFLGPEDSHIVVASNSPSLKVFELQT-MTCQILHGHTD 374
Query: 382 WVNTLALSTDYLMRVEATSTGG-----FKYDPANP----EESSKHALAKYQAQCPEGEK- 431
V LAL R+ A+ ++ + A + S H + C ++
Sbjct: 375 IV--LALDVFRKGRLFASCAKDQSICIWRMNKAGRVACVAQGSGHTHSVGTICCSRLKET 432
Query: 432 -LVSGSDDFTLFLWN-PE 447
LV+GS D T+ LW PE
Sbjct: 433 FLVTGSQDCTVKLWPIPE 450
Score = 89 (36.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 32/123 (26%), Positives = 56/123 (45%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS--ASFDKSI 484
P + L + S D T+ LW + + L GH + V F G + S + D +
Sbjct: 528 PMDQVLATASADGTIKLWALQ-DFSCLKTFEGHDASVLKVVFVSRGTQLLSRPSGSDGLV 586
Query: 485 KLWDGRIGKFITTLRGHVQAVYMVAWSS-DSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
KLW + + + TL H V+ + S D R L +G++DS + +W T++ + +
Sbjct: 587 KLWTIKNNECVKTLDAHEDKVWGLHCSRLDDRAL-TGASDSCVILWKDVTEEEQSEEQAR 645
Query: 544 GDE 546
+E
Sbjct: 646 REE 648
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 256 (95.2 bits), Expect = 7.9e-19, Sum P(2) = 7.9e-19
Identities = 52/139 (37%), Positives = 80/139 (57%)
Query: 433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG 492
VSG + + LW+ +K++ LA + GH + EF P G+ IASAS+D + +LWD
Sbjct: 266 VSGGGEGNVCLWSLDKDQP-LATLEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDVETT 324
Query: 493 KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDW 552
+ GH + VY VA+++D LL SG DS +VW+++T + L GH E++ +DW
Sbjct: 325 AELQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRTGRTVMILEGHIREIFGLDW 384
Query: 553 APDGEKVASGGKDKVLRLW 571
DG +V SG D ++ W
Sbjct: 385 GVDGYRVLSGSGDGWVKCW 403
Score = 191 (72.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 47/147 (31%), Positives = 73/147 (49%)
Query: 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD 260
+++ GH+ V +F P+G+ +AS S DTT R WDV T L EGH V +A++ D
Sbjct: 286 ATLEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDVETTAELQLQEGHSREVYTVAFNND 345
Query: 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
L SG + + WD TG+ + + GH + I L W R + SG DG
Sbjct: 346 GSLLASGGLDSIGRVWDLRTGRTV-MILEGHIREIFGLDWGV----DGYRVLSGSG-DGW 399
Query: 321 IRIWDVILSQCVRVLTSHTRSVTCIRW 347
++ WD+ + + +H V+ +RW
Sbjct: 400 VKCWDLRQVKNTGGIGAHKSVVSDVRW 426
Score = 190 (71.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P G+ + S S D T LW+ E + L GH + + V F+ DG ++AS D ++
Sbjct: 302 PSGKYIASASYDTTWRLWDVETTAE-LQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRV 360
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
WD R G+ + L GH++ ++ + W D ++SGS D +K W+++ K + H
Sbjct: 361 WDLRTGRTVMILEGHIREIFGLDWGVDGYRVLSGSGDGWVKCWDLRQVKNTGGIGAHKSV 420
Query: 547 VYAVDWAPDGEKVA 560
V V W E +
Sbjct: 421 VSDVRWYKGSESAS 434
Score = 185 (70.2 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 67/280 (23%), Positives = 114/280 (40%)
Query: 216 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA 275
S + + SG G+ V W + PL EGH V + P K + S +
Sbjct: 259 SESAVNFVSGGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEFHPSGKYIASASYDTTWRL 318
Query: 276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL 335
WD T ++ Q GH + + +++ N+ AS G D R+WD+ + V +L
Sbjct: 319 WDVETTAEL-QLQEGHSREVYTVAF-----NNDGSLLASGGLDSIGRVWDLRTGRTVMIL 372
Query: 336 TSHTRSVTCIRWGGSGL-IYSASQDRTIKVW-----RASDGVMC-RTLEGHAHWVNTLAL 388
H R + + WG G + S S D +K W + + G+ +++ W +
Sbjct: 373 EGHIREIFGLDWGVDGYRVLSGSGDGWVKCWDLRQVKNTGGIGAHKSVVSDVRWYKG-SE 431
Query: 389 STDYLMRVEATSTGGFKYDPAN-PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
S +L E G D A P + K + + + S +DD++L
Sbjct: 432 SASFLPTTEG-QPGRMDVDGATAPVQPRKSGTFFVSSGFDKNVNIFS-ADDWSLI----- 484
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
K+L+ GH + + S + + IAS D+++KLW
Sbjct: 485 ---KTLS---GHSGNVLSADISNNAQWIASCGHDRTVKLW 518
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 47/182 (25%), Positives = 77/182 (42%)
Query: 119 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTE 178
S + + SG G+ V W + PL EG + V TE + + T
Sbjct: 259 SESAVNFVSGGGEGNVCLWSLDKDQPLATLEG--HSGRVCRTEFHPSGKYIASASYDTTW 316
Query: 179 EVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 238
+ D+ + A Q++ GH+ V +V F+ +G LASG D+ R WD+ T
Sbjct: 317 RLWDV--ETTAELQLQE---------GHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRT 365
Query: 239 QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITAL 298
+ EGH + + W D +++SG +G + WD K G + HK ++ +
Sbjct: 366 GRTVMILEGHIREIFGLDWGVDGYRVLSGSGDGWVKCWDLRQVKNTGG-IGAHKSVVSDV 424
Query: 299 SW 300
W
Sbjct: 425 RW 426
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 43/159 (27%), Positives = 66/159 (41%)
Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
+++ GH+ V +F P+G+ +AS S DTT R WDV T L EG Y
Sbjct: 286 ATLEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDVETTAELQLQEGHSREVYTVAFNND 345
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
+L LD++ V+ +R R + GH + + + +G +
Sbjct: 346 GSLLASGGLDSIGR------------VWDLR-TGRTVMILEGHIREIFGLDWGVDGYRVL 392
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
SGSGD V+ WD+ HK V + W S+
Sbjct: 393 SGSGDGWVKCWDLRQVKNTGGIGAHKSVVSDVRWYKGSE 431
Score = 42 (19.8 bits), Expect = 7.9e-19, Sum P(2) = 7.9e-19
Identities = 8/27 (29%), Positives = 19/27 (70%)
Query: 114 ISV-KFSPNGRSLASGSGDTTVRFWDV 139
+S+ +F+P+G+++A+G+ +R V
Sbjct: 200 VSICRFAPDGQTIATGNWGGGIRLLGV 226
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 252 (93.8 bits), Expect = 8.2e-19, P = 8.2e-19
Identities = 93/335 (27%), Positives = 154/335 (45%)
Query: 244 KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF 303
+C H W+ I + + +++G + W S GK I + GH + ++W
Sbjct: 96 QCMFHDDWISSIKGAEE--WILTGSYDKTSRIW-SLEGKSI-MTIVGHTDVVKDVAWVKK 151
Query: 304 HLNHQCRRFASSGKDGAIRIWDVILSQC-VRVL---TSHTRSVTCIRWGGSGLIY-SASQ 358
+ C ++S D I +W+ + + V+ L H SV I GSG + S S
Sbjct: 152 D-SLSCLLLSAS-MDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSW 209
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418
D+ +K+W T E + + ST+ + + T G P S H
Sbjct: 210 DKMLKIWSTVP-----TDEE-----DEMEESTNRPRKKQKTEQLGLTRTPV--VTLSGHM 257
Query: 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
A + E++ S S D T+ +W+ E + +TG++ + NC+ +SP + +AS
Sbjct: 258 EAVSSVLWSDAEEICSASWDHTIRVWDVESGSLK-STLTGNK-VFNCISYSPLCKRLASG 315
Query: 479 SFDKSIKLWDGRI--GKFIT-TLRGHVQAVYMVAWS-SDSRLLVSGSADSTLKVWNMKTK 534
S D+ I+LWD R G ++ +L H V V WS + + L+SGS D+ +K+W+ ++
Sbjct: 316 STDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSC 375
Query: 535 KIE-QDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
K DL H D+V +VDW G + SGG D L
Sbjct: 376 KAPLYDLAAHEDKVLSVDWTDTG-LLLSGGADNKL 409
Score = 211 (79.3 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 56/194 (28%), Positives = 91/194 (46%)
Query: 178 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 237
EE + +KQ Q+ ++ GH EAV SV +S + + S S D T+R WDV
Sbjct: 228 EESTNRPRKKQKTEQLGLTRTPVVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVE 286
Query: 238 TQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST--GKQIGQPMRGHKQWI 295
+ + G+K + CI++SP K+L SG + I WD T G + + H W+
Sbjct: 287 SGSLKSTLTGNKVFN-CISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWV 345
Query: 296 TALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-VRVLTSHTRSVTCIRWGGSGLIY 354
T++ W P H ++ S D +++WD + + L +H V + W +GL+
Sbjct: 346 TSVKWSPTHE----QQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLL 401
Query: 355 SASQDRTIKVWRAS 368
S D + +R S
Sbjct: 402 SGGADNKLYSYRYS 415
Score = 191 (72.3 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 103/430 (23%), Positives = 179/430 (41%)
Query: 12 RILTRFKSDDGEVAGDLLDLPLNV----NTEHLSLIVNSLLQ-QDEGTPYL---FYVNET 63
++ TRF +D+ + A D D+P ++ LS I+N LL+ ++E ++ F +
Sbjct: 3 QLQTRFYTDNKKYAID--DVPFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQ 60
Query: 64 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 123
+ L + ++ +++EEVV+I Y ++ + +C H + + S+K +
Sbjct: 61 FLRMPLDKHMEMENISSEEVVEIEYVEK--YTAPQPEQCMF----HDDWISSIKGAEEW- 113
Query: 124 SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183
+ +GS D T R W + ++ + G + V + K D L L+ I
Sbjct: 114 -ILTGSYDKTSRIWSLEGKS-IMTIVG--HTDVVKDVAWVKK--DSLSCLLLSASMDQTI 167
Query: 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT------ 237
+ + V R + GHA +V S+ +G SGS D ++ W
Sbjct: 168 LLWEWNV--ERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEED 225
Query: 238 --------------------TQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
T+TP+ GH V + WS D++++ S + I WD
Sbjct: 226 EMEESTNRPRKKQKTEQLGLTRTPVVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWD 284
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV--- 334
+G + + G+K + +S+ P C+R AS D IR+WD V
Sbjct: 285 VESGS-LKSTLTGNKVF-NCISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLS 337
Query: 335 LTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
LTSHT VT ++W + + S S D +K+W D C+ + LA D
Sbjct: 338 LTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW---DTRSCKAP------LYDLAAHEDK 388
Query: 393 LMRVEATSTG 402
++ V+ T TG
Sbjct: 389 VLSVDWTDTG 398
Score = 187 (70.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 72/271 (26%), Positives = 124/271 (45%)
Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRW----GGSGLIYSASQDRTIKVWRASDGVMC 373
D RIW + + + + HT V + W S L+ SAS D+TI +W + +
Sbjct: 120 DKTSRIWS-LEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWN---VE 175
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV 433
R H A S D + A G K+ + ++ + K + P E+
Sbjct: 176 RNKVKALHCCRGHAGSVDSI----AVDGSGTKFCSGSWDK-----MLKIWSTVPTDEE-- 224
Query: 434 SGSDDFTLFLWNPEKEKKS----LAR-----MTGHQQLINCVEFSPDGRIIASASFDKSI 484
D+ P K++K+ L R ++GH + ++ V +S D I SAS+D +I
Sbjct: 225 ---DEMEESTNRPRKKQKTEQLGLTRTPVVTLSGHMEAVSSVLWS-DAEEICSASWDHTI 280
Query: 485 KLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK---IEQDLP 541
++WD G +TL G+ + +++S + L SGS D +++W+ +TK + L
Sbjct: 281 RVWDVESGSLKSTLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLT 339
Query: 542 GHGDEVYAVDWAPDGEK-VASGGKDKVLRLW 571
H V +V W+P E+ + SG D +++LW
Sbjct: 340 SHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Score = 150 (57.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 55/208 (26%), Positives = 97/208 (46%)
Query: 81 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 140
EE + +KQ Q+ ++ GH EAV SV +S + + S S D T+R WDV
Sbjct: 228 EESTNRPRKKQKTEQLGLTRTPVVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVE 286
Query: 141 TQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT 200
+ + G ++ + + K LA +T+ + + + + + +
Sbjct: 287 SGSLKSTLTGNKVFNCISYSPLCKRLASG------STDRHIRLWDPR-----TKDGSLVS 335
Query: 201 SSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWS 258
S+ H V SVK+SP + + L SGS D V+ WD + + PL+ H+ VL + W+
Sbjct: 336 LSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT 395
Query: 259 PDSKQLVSGCKNGVIHAWD-SSTGKQIG 285
D+ L+SG + ++++ S T +G
Sbjct: 396 -DTGLLLSGGADNKLYSYRYSPTTSHVG 422
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 37/104 (35%), Positives = 55/104 (52%)
Query: 475 IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW-SSDSR--LLVSGSADSTLKVW-- 529
I + S+DK+ ++W GK I T+ GH V VAW DS LL+S S D T+ +W
Sbjct: 114 ILTGSYDKTSRIWSLE-GKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEW 172
Query: 530 NMKTKKIE--QDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
N++ K++ GH V ++ G K SG DK+L++W
Sbjct: 173 NVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIW 216
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 255 (94.8 bits), Expect = 8.6e-19, P = 8.6e-19
Identities = 65/233 (27%), Positives = 120/233 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + + S +D +I+IWD +C++VLT HT SV C+++ +I + S D T++V
Sbjct: 231 LQYDDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRV 289
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W S G + TL H V L ++ + +D A+ + S + L ++
Sbjct: 290 WDVSSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAV-WDMASATDISLRRVLVGHR 348
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +W+ + + + GH++ I C+++ R++ S S
Sbjct: 349 AAVNVVDFDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 405
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW+++
Sbjct: 406 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 456
Score = 232 (86.7 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 79/299 (26%), Positives = 138/299 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D +++SG ++ I WD + + + + + GH + L ++ R
Sbjct: 228 VYCLQYDDD--KIISGLRDNSIKIWDKQSLECL-KVLTGHTGSVLCLQYDE-------RV 277
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW---RAS 368
+ D +R+WDV + + L H +V +R+ +GL+ + S+DR+I VW A+
Sbjct: 278 IVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFC-NGLMVTCSKDRSIAVWDMASAT 336
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLM--------RVEATSTGGFKYDPANPEESSKHALA 420
D + R L GH VN + Y++ +V +TST F K +A
Sbjct: 337 DISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEF----VRTLNGHKRGIA 392
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++
Sbjct: 393 CLQYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAY 446
Query: 481 DKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
D IK+WD + + TL H V+ + + D ++S S D T+ +W+
Sbjct: 447 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 503
Score = 231 (86.4 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 67/248 (27%), Positives = 128/248 (51%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q ++ + +++ V C+++ +I S +D +IK+W + L GH V L L
Sbjct: 216 QRIQCRSENSKGVYCLQYDDDKII-SGLRDNSIKIWDKQSLECLKVLTGHTGSV--LCLQ 272
Query: 390 TDYLMRVEATSTGGFK-YDPANPEESSK---HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + V +S + +D ++ E + H A + G +V+ S D ++ +W+
Sbjct: 273 YDERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCNG-LMVTCSKDRSIAVWD 331
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
SL R + GH+ +N V+F D + I SAS D++IK+W +F+ TL GH +
Sbjct: 332 MASATDISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 389
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 390 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 445
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 446 YDGKIKVW 453
Score = 212 (79.7 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 66/262 (25%), Positives = 119/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV++ L H VL + +
Sbjct: 257 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFC 314
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S+T + + + GH+ + + ++ ++ ++SG
Sbjct: 315 --NGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDDKYI------VSASG 366
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 367 -DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 424
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 425 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 482
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + ++S S D T+ +W+
Sbjct: 483 LQFDEFQ-IISSSHDDTILIWD 503
Score = 188 (71.2 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 72/282 (25%), Positives = 126/282 (44%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+ SG D +++ WD + L GH VLC+ + D + +V+G + + WD S+G
Sbjct: 238 IISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVSSG 295
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSH 338
+ + + H + + HL + KD +I +WD+ + + RVL H
Sbjct: 296 EVLNTLIH-HNEAV-------LHLRFCNGLMVTCSKDRSIAVWDMASATDISLRRVLVGH 347
Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
+V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 348 RAAVNVVDFDDKYIV-SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLV-VSG 404
Query: 399 TSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------PEK 448
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 405 SSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 463
Query: 449 EKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F + +II+S S D +I +WD
Sbjct: 464 PASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWD 503
Score = 146 (56.5 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 48/181 (26%), Positives = 82/181 (45%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C + GH +V+ +++ R + +GS D+TVR WDV++ L T L + NE
Sbjct: 257 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVSSGEVL----NT--LIHHNEAV 308
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAV-FQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
+ + L + T + + + + A +R V + GH AV V F + +
Sbjct: 309 LHLRFCNGLMV-TCSKDRSIAVWDMASATDISLRRV------LVGHRAAVNVVDF--DDK 359
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ S SGD T++ W +T + GHK + C+ + + +VSG + I WD
Sbjct: 360 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC 417
Query: 281 G 281
G
Sbjct: 418 G 418
Score = 144 (55.7 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 383 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 438
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 439 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDT 498
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 499 ILIWDFL 505
Score = 37 (18.1 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 15/75 (20%), Positives = 34/75 (45%)
Query: 125 LASGSGDTTVRFWDVTTQTPLFKCEGTP----YLFYVNETEITKTLADVLPLDTLNTEEV 180
+ SG D +++ WD + L G L Y +T + + + +++ EV
Sbjct: 238 IISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVSSGEV 297
Query: 181 VD-IVYQKQAVFQVR 194
++ +++ +AV +R
Sbjct: 298 LNTLIHHNEAVLHLR 312
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 262 (97.3 bits), Expect = 9.0e-19, Sum P(2) = 9.0e-19
Identities = 80/288 (27%), Positives = 124/288 (43%)
Query: 210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
+ ++ ++P GR L +G+ W+ T + H V + WS + +V+G
Sbjct: 149 IFTLAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDH 208
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS 329
G + W S+ + + HK+ I +S+ P +F S DG +RIWD +
Sbjct: 209 GGYVKYWQSNMNNV--KMYQAHKEAIRGISFSPTD-----SKFVSGSDDGTLRIWDFMRC 261
Query: 330 QCVRVLTSHTRSVTCIRWGGS-GLIYSASQD--RTIKVWRASDGVMCRTLEGHAHWVNTL 386
Q RVL H V C+ W G+I S S+D + IK+W G+ TL H V L
Sbjct: 262 QEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDL 321
Query: 387 ALSTDYLMRVEATSTGGFK-YDPAN-PEESSKHALAKYQAQC----PEGEKLV-SGSDDF 439
+ + V A+ K +D N EE K +A P E L SG D
Sbjct: 322 KWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDG 381
Query: 440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
++ WN +K+ T H ++ + + P G I+ S S D +IK W
Sbjct: 382 SILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFW 429
Score = 219 (82.2 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 70/258 (27%), Positives = 111/258 (43%)
Query: 325 DVILSQCVRVLTSHTRS-VTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
+ + ++ V+ T+ R + + W G L+ AS +W L+ H
Sbjct: 131 NAVTTRFVKTATNKMRCPIFTLAWTPEGRRLVTGASSGE-FTLWNGLTFNFETILQAHDI 189
Query: 382 WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ----CPEGEKLVSGSD 437
V T+ S + V G KY +N + K + P K VSGSD
Sbjct: 190 SVRTMVWSHNDSWMVTGDHGGYVKYWQSNMNNVKMYQAHKEAIRGISFSPTDSKFVSGSD 249
Query: 438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS--IKLWDGRIGKFI 495
D TL +W+ + ++ + GH + CV + P +I S S D IK+WD + G +
Sbjct: 250 DGTLRIWDFMRCQEERV-LRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIAL 308
Query: 496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE-QDLPGHGDEVYAVDWAP 554
TL H V + W+ + LV+ S D LK+++++ + E Q GH E +V W P
Sbjct: 309 ATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHP 368
Query: 555 DGEKV-ASGGKDKVLRLW 571
E + SGG D + W
Sbjct: 369 IHEGLFCSGGSDGSILFW 386
Score = 202 (76.2 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 67/290 (23%), Positives = 128/290 (44%)
Query: 295 ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLI 353
I L+W P + RR + G +W+ + +L +H SV + W +
Sbjct: 149 IFTLAWTP-----EGRRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWM 203
Query: 354 YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE 412
+ +K W+++ + + + H + ++ S V + G + +D +
Sbjct: 204 VTGDHGGYVKYWQSNMNNV-KMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQ 262
Query: 413 ESSKHALAKYQA--QC----PEGEKLVSGSDDFT--LFLWNPEKEKKSLARMTGHQQLIN 464
E + L + A +C P+ +VSGS D + +W+P K +LA + H+ +
Sbjct: 263 E--ERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDP-KSGIALATLHAHKSTVM 319
Query: 465 CVEFSPDGRIIASASFDKSIKLWDGR-IGKFITTLRGHVQAVYMVAWSS-DSRLLVSGSA 522
++++ +G + +AS D +KL+D R + + + RGH + V+W L SG +
Sbjct: 320 DLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGS 379
Query: 523 DSTLKVWNMKT-KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
D ++ WN+ T K+I H V+ + W P G + SG D ++ W
Sbjct: 380 DGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFW 429
Score = 198 (74.8 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 54/184 (29%), Positives = 85/184 (46%)
Query: 198 RCTSS--MPGHAEAVISVKFSPNGRSLASGSGDTT--VRFWDVTTQTPLFKCEGHKHWVL 253
RC + GH V V + P + SGS D ++ WD + L HK V+
Sbjct: 260 RCQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVM 319
Query: 254 CIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFA 313
+ W+ + LV+ ++ ++ +D ++ Q RGHK+ +++SW P H F
Sbjct: 320 DLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEG----LFC 375
Query: 314 SSGKDGAIRIWDVILSQCVR-VLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW-RASDG 370
S G DG+I W+V + + V T+H V + W G ++ S S D TIK W R G
Sbjct: 376 SGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFWTRNRPG 435
Query: 371 VMCR 374
+ R
Sbjct: 436 DLMR 439
Score = 184 (69.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 52/188 (27%), Positives = 77/188 (40%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H EA+ + FSP SGS D T+R WD GH V C+ W P +V
Sbjct: 228 HKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIV 287
Query: 266 SGCKNGV--IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRI 323
SG K+ I WD +G + + HK + L W N ++ +D +++
Sbjct: 288 SGSKDNQQPIKIWDPKSGIALAT-LHAHKSTVMDLKW-----NDNGNWLVTASRDHLLKL 341
Query: 324 WDVI-LSQCVRVLTSHTRSVTCIRWGG--SGLIYSASQDRTIKVWRASDGVMCRTLE-GH 379
+D+ L + V+V H + + + W GL S D +I W +E H
Sbjct: 342 FDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAH 401
Query: 380 AHWVNTLA 387
V TLA
Sbjct: 402 DSIVWTLA 409
Score = 182 (69.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 77/327 (23%), Positives = 134/327 (40%)
Query: 217 PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
P L + S T RF V T T +C + +AW+P+ ++LV+G +G W
Sbjct: 121 PPSAYLDNPSNAVTTRF--VKTATNKMRCP-----IFTLAWTPEGRRLVTGASSGEFTLW 173
Query: 277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT 336
+ T ++ H + + W +H + G ++ W ++ V++
Sbjct: 174 NGLTFN-FETILQAHDISVRTMVW-----SHNDSWMVTGDHGGYVKYWQSNMNN-VKMYQ 226
Query: 337 SHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVMC---RTLEGHAHWVNTLALSTDY 392
+H ++ I + + + S S D T+++W D + C R L GH V +
Sbjct: 227 AHKEAIRGISFSPTDSKFVSGSDDGTLRIW---DFMRCQEERVLRGHGADVKCVHWHPQK 283
Query: 393 LMRVEATSTGG--FK-YDPANPEE-SSKHALAKYQAQCP---EGEKLVSGSDDFTLFLWN 445
M V + K +DP + ++ HA G LV+ S D L L++
Sbjct: 284 GMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFD 343
Query: 446 PEKEKKSLARMTGHQQLINCVEFSP--DGRIIASASFDKSIKLWDGRIGKFITTLR-GHV 502
++ + GH++ + V + P +G + S D SI W+ K I + H
Sbjct: 344 IRNLREEVQVFRGHKKEASSVSWHPIHEG-LFCSGGSDGSILFWNVGTDKEIGCVETAHD 402
Query: 503 QAVYMVAWSSDSRLLVSGSADSTLKVW 529
V+ +AW +L SGS D T+K W
Sbjct: 403 SIVWTLAWHPLGHILCSGSNDHTIKFW 429
Score = 79 (32.9 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWD 138
H EA+ + FSP SGS D T+R WD
Sbjct: 228 HKEAIRGISFSPTDSKFVSGSDDGTLRIWD 257
Score = 43 (20.2 bits), Expect = 9.0e-19, Sum P(2) = 9.0e-19
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 113 VISVKFSPNGRSLASGSGDTTVRFWDVTT 141
+ ++ ++P GR L +G+ W+ T
Sbjct: 149 IFTLAWTPEGRRLVTGASSGEFTLWNGLT 177
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 254 (94.5 bits), Expect = 9.1e-19, P = 9.1e-19
Identities = 64/233 (27%), Positives = 121/233 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + + S +D +I+IWD +C++VLT HT SV C+++ +I + S D T++V
Sbjct: 197 LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRV 255
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G + TL H V L S ++ + +D A+ + + + L ++
Sbjct: 256 WDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAV-WDMASATDITLRRVLVGHR 314
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +W+ + + + GH++ I C+++ R++ S S
Sbjct: 315 AAVNVVDFDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 371
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW+++
Sbjct: 372 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 422
Score = 241 (89.9 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 80/299 (26%), Positives = 139/299 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D +++SG ++ I WD S+ + + + + GH + L ++ R
Sbjct: 194 VYCLQYDDD--KIISGLRDNSIKIWDKSSLECL-KVLTGHTGSVLCLQYDE-------RV 243
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW---RAS 368
+ D +R+WDV + + L H +V +R+ +GL+ + S+DR+I VW A+
Sbjct: 244 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTCSKDRSIAVWDMASAT 302
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLM--------RVEATSTGGFKYDPANPEESSKHALA 420
D + R L GH VN + Y++ +V +TST F K +A
Sbjct: 303 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEF----VRTLNGHKRGIA 358
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++
Sbjct: 359 CLQYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAY 412
Query: 481 DKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
D IK+WD + + TL H V+ + + D ++S S D T+ +W+
Sbjct: 413 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 469
Score = 232 (86.7 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 67/248 (27%), Positives = 125/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q ++ + +++ V C+++ +I S +D +IK+W S + L GH V L L
Sbjct: 182 QRIQCRSENSKGVYCLQYDDDKII-SGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQ 238
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + V +S + N E H A + G +V+ S D ++ +W+
Sbjct: 239 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-LMVTCSKDRSIAVWD 297
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W +F+ TL GH +
Sbjct: 298 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 355
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 356 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 411
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 412 YDGKIKVW 419
Score = 219 (82.2 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV T L H VL + +S
Sbjct: 223 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 280
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S+T + + + GH+ + + ++ ++ ++SG
Sbjct: 281 --NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 332
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 333 -DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 390
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 391 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 448
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + ++S S D T+ +W+
Sbjct: 449 LQFDEFQ-IISSSHDDTILIWD 469
Score = 194 (73.4 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 72/282 (25%), Positives = 127/282 (45%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+ SG D +++ WD ++ L GH VLC+ + D + +V+G + + WD +TG
Sbjct: 204 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTG 261
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSH 338
+ + + H + + HL + KD +I +WD+ + + RVL H
Sbjct: 262 EVLNTLIH-HNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 313
Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
+V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 314 RAAVNVVDFDDKYIV-SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLV-VSG 370
Query: 399 TSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------PEK 448
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 371 SSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 429
Query: 449 EKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F + +II+S S D +I +WD
Sbjct: 430 PASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWD 469
Score = 152 (58.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 50/182 (27%), Positives = 83/182 (45%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C + GH +V+ +++ R + +GS D+TVR WDV T L T L + NE
Sbjct: 223 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVL----NT--LIHHNEAV 274
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS--MPGHAEAVISVKFSPNG 219
+ ++ L + T + + + AV+ + T T + GH AV V F +
Sbjct: 275 LHLRFSNGLMV-TCSKDRSI-------AVWDMASATDITLRRVLVGHRAAVNVVDF--DD 324
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + S SGD T++ W +T + GHK + C+ + + +VSG + I WD
Sbjct: 325 KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 382
Query: 280 TG 281
G
Sbjct: 383 CG 384
Score = 144 (55.7 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 349 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 404
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 405 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDT 464
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 465 ILIWDFL 471
Score = 48 (22.0 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 17/75 (22%), Positives = 35/75 (46%)
Query: 125 LASGSGDTTVRFWDVTTQTPLFKCEGTP----YLFYVNETEITKTLADVLPLDTLNTEEV 180
+ SG D +++ WD ++ L G L Y +T + + + +NT EV
Sbjct: 204 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEV 263
Query: 181 VD-IVYQKQAVFQVR 194
++ +++ +AV +R
Sbjct: 264 LNTLIHHNEAVLHLR 278
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 270 (100.1 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 115/484 (23%), Positives = 206/484 (42%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H + V+ FS + R +A+ S D V+ W+ T + + + VN T +
Sbjct: 656 HEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYD--EHSEQVNCCHFTNSSHH 713
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
+L L T +++ + + Q C ++M GH +V +FSP+ + LAS S D
Sbjct: 714 LL-LATGSSDCFLKLWDLNQK--------ECRNTMFGHTNSVNHCRFSPDDKLLASCSAD 764
Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVL--------------CIAWSPDSKQLVSGCKNGVIH 274
T++ WD T+ K K + L C +WS D +++ KN +
Sbjct: 765 GTLKLWDATSANER-KSINVKQFFLNLEDPQEDMEVIVKCCSWSADGARIMVAAKNKIF- 822
Query: 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV 334
+D T +G+ GH I + P NH S + +W+ V
Sbjct: 823 LFDIHTSGLLGEIHTGHHSTIQYCDFSP--QNHLAVVALSQY---CVELWNTDSRSKVAD 877
Query: 335 LTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRA-----SDGVMCRTLEGHAHWVN-TLA 387
H V + + G + ++S D+TI++W + VM + N +
Sbjct: 878 CRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAVMLKQEVDVVFQENEVMV 937
Query: 388 LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
L+ D++ R++ + + D + S L+ P + + G ++ + +
Sbjct: 938 LAVDHIRRLQLINGRTGQIDYLTEAQVSCCCLS------PHLQYIAFGDENGAIEILELV 991
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
+ +R H++ + ++F+ D + + S+S D I++W+ ++ K I LRGH + V
Sbjct: 992 NNRIFQSRFQ-HKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIF-LRGHQETVKD 1049
Query: 508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV 567
+SRLL S S D T+KVWN+ T E+D H V + D + D K +S DK
Sbjct: 1050 FRLLKNSRLL-SWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKT 1108
Query: 568 LRLW 571
++W
Sbjct: 1109 AKIW 1112
Score = 227 (85.0 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 71/302 (23%), Positives = 131/302 (43%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
H +AV FS +G+ +AS D T++ + T L + + H+ VLC A+S D + +
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIA 673
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
+ + + W+S TG+ + H + + + + +H A+ D +++WD
Sbjct: 674 TCSVDKKVKIWNSMTGELV-HTYDEHSEQVNCCHFT--NSSHHLL-LATGSSDCFLKLWD 729
Query: 326 VILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
+ +C + HT SV R+ L+ S S D T+K+W A+ +++ ++N
Sbjct: 730 LNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSINVKQFFLN 789
Query: 385 TLALSTDYLMRVEATSTGG-------------FKYDPANPE-----ESSKHALAKYQAQC 426
D + V+ S F +D + H+ +Y
Sbjct: 790 LEDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLFDIHTSGLLGEIHTGHHSTIQYCDFS 849
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+ V + + LWN + K +A GH ++ V FSPDG ++S D++I+L
Sbjct: 850 PQNHLAVVALSQYCVELWNTDSRSK-VADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRL 908
Query: 487 WD 488
W+
Sbjct: 909 WE 910
Score = 216 (81.1 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 51/158 (32%), Positives = 83/158 (52%)
Query: 417 HALAKYQAQCPE-GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII 475
H A Y A E G+++ S D TL ++ E +K L + H+ + C FS D R I
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEK-LLEIKAHEDEVLCCAFSTDDRFI 672
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKT 533
A+ S DK +K+W+ G+ + T H + V +++ S LL +GS+D LK+W++
Sbjct: 673 ATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQ 732
Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
K+ + GH + V ++PD + +AS D L+LW
Sbjct: 733 KECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLW 770
Score = 179 (68.1 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 80/331 (24%), Positives = 136/331 (41%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWD---VTTQTPLFKCEGTPYLFYVNETEITK 164
GH V V FSP+G S + S D T+R W+ V + + + +F NE +
Sbjct: 880 GHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAVMLKQEVDVVFQENEVMVL- 938
Query: 165 TLADVLPLDTLN---------TEEVVD-------IVY----QKQAVFQVRPVT--RCTSS 202
+ + L +N TE V + Y + ++ + R S
Sbjct: 939 AVDHIRRLQLINGRTGQIDYLTEAQVSCCCLSPHLQYIAFGDENGAIEILELVNNRIFQS 998
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
H + V ++F+ + ++L S S D ++ W+ +F GH+ V +S+
Sbjct: 999 RFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIF-LRGHQETVKDFRLLKNSR 1057
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
L+S +G + W+ TG + + H+ T LS + ++H +F+S+ D +
Sbjct: 1058 -LLSWSFDGTVKVWNIITGNK-EKDFVCHQG--TVLSCD---ISHDATKFSSTSADKTAK 1110
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVM---CRTL-- 376
IW L + L H V C + S L+ + + I++W S+G + C L
Sbjct: 1111 IWSFDLLLPLHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSE 1170
Query: 377 EG---HAHWVNTLALSTDYLMRVEATSTGGF 404
EG H WV L S D M + A GG+
Sbjct: 1171 EGAATHGGWVTDLCFSPDGKMLISA---GGY 1198
Score = 162 (62.1 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 45/166 (27%), Positives = 81/166 (48%)
Query: 411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL-WNPEKEKKSLARMT--GHQQLINCVE 467
PE S + AK QA+ +++ +G L+L W +K +L+R+ H +
Sbjct: 571 PETSEVYQQAKLQAK----QEVDNGM----LYLEWINKKNITNLSRLVVRPHTDAVYHAC 622
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527
FS DG+ IAS DK+++++ G+ + ++ H V A+S+D R + + S D +K
Sbjct: 623 FSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVK 682
Query: 528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV--ASGGKDKVLRLW 571
+WN T ++ H ++V + + A+G D L+LW
Sbjct: 683 IWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLW 728
Score = 158 (60.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 84/366 (22%), Positives = 148/366 (40%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH V V FSP+G S + S D T+R W+ T + C K+ + + D +
Sbjct: 880 GHLSWVHGVMFSPDGSSFLTSSDDQTIRLWE-TKKV----C---KNSAVMLKQEVD---V 928
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
V ++ A D Q+ G ++T L+ + A ++GAI I
Sbjct: 929 VFQENEVMVLAVDHIRRLQLINGRTGQIDYLTEAQVSCCCLSPHLQYIAFGDENGAIEIL 988
Query: 325 DVILSQCVRVLTSHTRSVTCIRW-GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
+++ ++ + H ++V I++ + S+S D I+VW C L GH V
Sbjct: 989 ELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLD-KCIFLRGHQETV 1047
Query: 384 NTLALSTDYLMRVEATSTGG----FKYDPANPEESSK-HALAKYQAQCP-EGEKLVSGSD 437
L + R+ + S G + N E+ H + K S S
Sbjct: 1048 KDFRLLKN--SRLLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSA 1105
Query: 438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI-- 495
D T +W+ + L + GH + C FS D ++A+ + I++W+ G+ +
Sbjct: 1106 DKTAKIWSFDL-LLPLHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHL 1164
Query: 496 ---TTLRG---HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYA 549
+ G H V + +S D ++L+S A +K WN+ T + Q +G +
Sbjct: 1165 CAPLSEEGAATHGGWVTDLCFSPDGKMLIS--AGGYIKWWNVVTGESSQTFYTNGTNLKK 1222
Query: 550 VDWAPD 555
+ +PD
Sbjct: 1223 IHVSPD 1228
Score = 157 (60.3 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 40/179 (22%), Positives = 75/179 (41%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C ++M GH +V +FSP+ + LAS S D T++ WD T+ K F++N +
Sbjct: 735 CRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANER-KSINVKQ-FFLNLED 792
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVF--QVRPVTRCTSSMPGHAEAVISVKFSPNG 219
+ + ++ + + + +V K +F + GH + FSP
Sbjct: 793 PQEDMEVIVKCCSWSADGARIMVAAKNKIFLFDIHTSGLLGEIHTGHHSTIQYCDFSPQN 852
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS 278
V W+ +++ + C GH WV + +SPD ++ + I W++
Sbjct: 853 HLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWET 911
Score = 144 (55.7 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 43/147 (29%), Positives = 71/147 (48%)
Query: 428 EGEKLVSGSDDFTLFLWN---PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI 484
+ +L+S S D T+ +WN KEK + HQ + + S D +S S DK+
Sbjct: 1054 KNSRLLSWSFDGTVKVWNIITGNKEKDFVC----HQGTVLSCDISHDATKFSSTSADKTA 1109
Query: 485 KLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI-------- 536
K+W + + LRGH V A+S DS LL +G + +++WN+ ++
Sbjct: 1110 KIWSFDLLLPLHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLS 1169
Query: 537 EQDLPGHGDEVYAVDWAPDGEKVASGG 563
E+ HG V + ++PDG+ + S G
Sbjct: 1170 EEGAATHGGWVTDLCFSPDGKMLISAG 1196
Score = 135 (52.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 45/162 (27%), Positives = 76/162 (46%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEK--EKKSL------ARMTGHQQ----LINCVEFSPDGRI 474
P+ + L S S D TL LW+ E+KS+ + Q+ ++ C +S DG
Sbjct: 753 PDDKLLASCSADGTLKLWDATSANERKSINVKQFFLNLEDPQEDMEVIVKCCSWSADGAR 812
Query: 475 IASASFDKSIKLWD----GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
I A+ +K I L+D G +G+ T GH + +S + L V + +++WN
Sbjct: 813 IMVAAKNK-IFLFDIHTSGLLGEIHT---GHHSTIQYCDFSPQNHLAVVALSQYCVELWN 868
Query: 531 MKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
++ D GH V+ V ++PDG + D+ +RLW+
Sbjct: 869 TDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWE 910
Score = 40 (19.1 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 11/51 (21%), Positives = 27/51 (52%)
Query: 6 DKITTKRILTRFKSDDGEVAG-DLLDLPLNVNTEHLSLIVNSLLQQDEGTP 55
D + + + +S G+ G ++L L +N+ L +S++++ +G+P
Sbjct: 271 DSVMGPKYVVPVESSLGKEKGLEILSLFVNMKKADLPEQAHSIIKECKGSP 321
Score = 39 (18.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 323 IWDV-IL----SQCVRVLTSHTRSVT 343
+WD +L SQC +LT+ +SVT
Sbjct: 245 VWDSWVLKAFDSQCQILLTTRDKSVT 270
>POMBASE|SPAC9G1.05 [details] [associations]
symbol:SPAC9G1.05 "actin cortical patch component Aip1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0030042 "actin filament
depolymerization" evidence=ISO] [GO:0030479 "actin cortical patch"
evidence=ISO] [GO:0032153 "cell division site" evidence=IDA]
[GO:0043234 "protein complex" evidence=NAS] [GO:0051286 "cell tip"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC9G1.05 GO:GO:0005829 GO:GO:0005634
GO:GO:0043234 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0032153 GO:GO:0051286 eggNOG:COG2319
GO:GO:0030479 GO:GO:0030042 HOGENOM:HOG000162559 OrthoDB:EOG4P5PJ9
OMA:LKDQKKC PIR:T39228 RefSeq:NP_593560.1 ProteinModelPortal:O14301
IntAct:O14301 STRING:O14301 PRIDE:O14301 EnsemblFungi:SPAC9G1.05.1
GeneID:2542795 KEGG:spo:SPAC9G1.05 NextBio:20803838 Uniprot:O14301
Length = 595
Score = 195 (73.7 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 83/365 (22%), Positives = 153/365 (41%)
Query: 183 IVYQKQAVFQVRPVTRCTSSMP--GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT 240
IVY +R + + + H +FSP+G +ASG VR WD +
Sbjct: 32 IVYPANKAIIIREIEKQENCFQYNEHTAPTTVARFSPSGYYVASGDNQGNVRIWDCAGED 91
Query: 241 PLFKCE--GHKHWVLCIAWSPDSKQLVS-G-CKNGVIHAWDSSTGKQIGQPMRGHKQWIT 296
+ K + + + W DS+++++ G K HA+ + +G +G+ + GH +
Sbjct: 92 KILKNQVTAISGRITDLDWDGDSQRIIAVGEGKERYGHAFTADSGNSVGE-IFGHSSVVN 150
Query: 297 ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY-S 355
A+S + R A++ D +I + + R L H++ V +R+ + + S
Sbjct: 151 AVSLR----KSRPFRAATASDDNSINFFHGTPYRFNRSLRVHSKFVYDVRYSPNDERFAS 206
Query: 356 ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF--KYDPANPEE 413
A D + V+ G ++ H + +++ S D V TS+ G+ K AN
Sbjct: 207 AGADGKVYVFDGKTGDQVYEIDAHKGSIFSISWSPDSSQFV--TSSAGYSCKIWDANTGS 264
Query: 414 SSKHALAKYQAQC-----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
+ L+ + Q P + ++ + L NP + K + + GHQ+ I
Sbjct: 265 LIREWLSSDKKQLVGTVWPTKDLIIVVNSKGNLTYLNPS-DCKVIDTIYGHQRSITAATL 323
Query: 469 SPDGRIIASASFDKSIKLWD-GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527
SPD +AS+D ++ WD G+ F H V + + D + + D TL+
Sbjct: 324 SPDATHFYTASYDGTVLSWDIGKQKAFPLVGESHTNQVMQMIMADDHVITIG--MDDTLR 381
Query: 528 VWNMK 532
V ++K
Sbjct: 382 VIDIK 386
Score = 182 (69.1 bits), Expect = 9.5e-19, Sum P(2) = 9.5e-19
Identities = 71/313 (22%), Positives = 126/313 (40%)
Query: 86 IVYQKQAVFQVRPVTRCTSSMP--GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT 143
IVY +R + + + H +FSP+G +ASG VR WD
Sbjct: 32 IVYPANKAIIIREIEKQENCFQYNEHTAPTTVARFSPSGYYVASGDNQGNVRIWD----- 86
Query: 144 PLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTS-- 201
C G + T I+ + D L D +++ ++ + K+ S
Sbjct: 87 ----CAGEDKILKNQVTAISGRITD-LDWDG-DSQRIIAVGEGKERYGHAFTADSGNSVG 140
Query: 202 SMPGHAEAV--ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP 259
+ GH+ V +S++ S R+ A+ S D ++ F+ T H +V + +SP
Sbjct: 141 EIFGHSSVVNAVSLRKSRPFRA-ATASDDNSINFFHGTPYRFNRSLRVHSKFVYDVRYSP 199
Query: 260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG 319
+ ++ S +G ++ +D TG Q+ + + HK I ++SW P +F +S
Sbjct: 200 NDERFASAGADGKVYVFDGKTGDQVYE-IDAHKGSIFSISWSP-----DSSQFVTSSAGY 253
Query: 320 AIRIWDVILSQCVRV-LTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEG 378
+ +IWD +R L+S + + W LI + + SD + T+ G
Sbjct: 254 SCKIWDANTGSLIREWLSSDKKQLVGTVWPTKDLIIVVNSKGNLTYLNPSDCKVIDTIYG 313
Query: 379 HAHWVNTLALSTD 391
H + LS D
Sbjct: 314 HQRSITAATLSPD 326
Score = 143 (55.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 51/211 (24%), Positives = 92/211 (43%)
Query: 338 HTRSVTCIRWGGSGLIYSASQDR--TIKVWRAS--DGVMCRTLEGHAHWVNTLALSTDYL 393
HT T R+ SG Y AS D +++W + D ++ + + + L D
Sbjct: 57 HTAPTTVARFSPSGY-YVASGDNQGNVRIWDCAGEDKILKNQVTAISGRITDLDWDGDS- 114
Query: 394 MRVEATSTGGFKYDPANPEESSK-------HALAKYQAQCPEGE--KLVSGSDDFTL--F 442
R+ A G +Y A +S H+ + + + SDD ++ F
Sbjct: 115 QRIIAVGEGKERYGHAFTADSGNSVGEIFGHSSVVNAVSLRKSRPFRAATASDDNSINFF 174
Query: 443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV 502
P + +SL R+ H + + V +SP+ ASA D + ++DG+ G + + H
Sbjct: 175 HGTPYRFNRSL-RV--HSKFVYDVRYSPNDERFASAGADGKVYVFDGKTGDQVYEIDAHK 231
Query: 503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
+++ ++WS DS V+ SA + K+W+ T
Sbjct: 232 GSIFSISWSPDSSQFVTSSAGYSCKIWDANT 262
Score = 142 (55.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 57/271 (21%), Positives = 101/271 (37%)
Query: 313 ASSGKDGAIRIWDVILSQCV--RVLTSHTRSVTCIRWGGSG---LIYSASQDRTIKVWRA 367
AS G +RIWD + +T+ + +T + W G + ++R + A
Sbjct: 74 ASGDNQGNVRIWDCAGEDKILKNQVTAISGRITDLDWDGDSQRIIAVGEGKERYGHAFTA 133
Query: 368 SDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG----FKYDPANPEESSK-HALAKY 422
G + GH+ VN ++L R S F P S + H+ Y
Sbjct: 134 DSGNSVGEIFGHSSVVNAVSLRKSRPFRAATASDDNSINFFHGTPYRFNRSLRVHSKFVY 193
Query: 423 QAQ-CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
+ P E+ S D +++++ K + + H+ I + +SPD ++S
Sbjct: 194 DVRYSPNDERFASAGADGKVYVFDG-KTGDQVYEIDAHKGSIFSISWSPDSSQFVTSSAG 252
Query: 482 KSIKLWDGRIGKFITT-LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL 540
S K+WD G I L + + W + ++V S + L N K+ +
Sbjct: 253 YSCKIWDANTGSLIREWLSSDKKQLVGTVWPTKDLIIVVNSKGN-LTYLNPSDCKVIDTI 311
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH + A +PD + D + W
Sbjct: 312 YGHQRSITAATLSPDATHFYTASYDGTVLSW 342
Score = 124 (48.7 bits), Expect = 9.5e-19, Sum P(2) = 9.5e-19
Identities = 34/151 (22%), Positives = 68/151 (45%)
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEK-EKKSLARMTGHQQLINCVEFSPDGRIIASASFDK 482
A P + G +D +++ EK E +A+ I C+ +SPDG+ +A
Sbjct: 442 ASHPLKSEFCVGGEDCCVYIHTLEKGELCEVAQCKDSTAPITCLAYSPDGKYLACGDASG 501
Query: 483 SIKLWDGRIGKFITTLRG-HVQAVYMVAWSSDSRLLVSGSADSTLKVWNM-KTKKIEQDL 540
+ L+D + IT+ H + ++W++ S L + S D+ + ++++ + K
Sbjct: 502 KVVLYDANSREVITSRWAFHTGRILGMSWNAKSTHLATASLDTNIHIYSVERPMKYIAMK 561
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
H V+W + E + S G D +++W
Sbjct: 562 NAHSLGATQVEWVSENE-LLSTGSDAAIKVW 591
Score = 119 (46.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 31/123 (25%), Positives = 55/123 (44%)
Query: 244 KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF 303
+C+ + C+A+SPD K L G +G + +D+++ + I H I +SW
Sbjct: 474 QCKDSTAPITCLAYSPDGKYLACGDASGKVVLYDANSREVITSRWAFHTGRILGMSW--- 530
Query: 304 HLNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTI 362
N + A++ D I I+ V + + + +H+ T + W + S D I
Sbjct: 531 --NAKSTHLATASLDTNIHIYSVERPMKYIAMKNAHSLGATQVEWVSENELLSTGSDAAI 588
Query: 363 KVW 365
KVW
Sbjct: 589 KVW 591
Score = 106 (42.4 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
A P+G+ L G + L++ + +R H I + ++ +A+AS D +
Sbjct: 486 AYSPDGKYLACGDASGKVVLYDANSREVITSRWAFHTGRILGMSWNAKSTHLATASLDTN 545
Query: 484 IKLWD-GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
I ++ R K+I H V W S++ LL +GS D+ +KVW++
Sbjct: 546 IHIYSVERPMKYIAMKNAHSLGATQVEWVSENELLSTGS-DAAIKVWSV 593
Score = 73 (30.8 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 30/129 (23%), Positives = 58/129 (44%)
Query: 80 TEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 138
T++++ +V K + + P + ++ GH ++ + SP+ + S D TV WD
Sbjct: 284 TKDLIIVVNSKGNLTYLNPSDCKVIDTIYGHQRSITAATLSPDATHFYTASYDGTVLSWD 343
Query: 139 VTTQTPLFKCEGTPYLFYVNETEITKTLAD--VLPLDTLNTEEVVDI---VYQKQAVFQV 193
+ Q F G + N+ + +AD V+ + +T V+DI + K VF
Sbjct: 344 IGKQKA-FPLVGESH---TNQV-MQMIMADDHVITIGMDDTLRVIDIKQGCFAKDNVFPT 398
Query: 194 --RPVTRCT 200
+P+ C+
Sbjct: 399 GYQPIGVCS 407
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 243 (90.6 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 75/301 (24%), Positives = 136/301 (45%)
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEP--- 302
GH + + W+ DSK LVS ++G + WDS +T K P+R W+ ++ P
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRS--SWVMTCAYAPSGN 110
Query: 303 F----HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ 358
F L++ C + ++G +++ R L++HT ++C R+ I ++S
Sbjct: 111 FVACGGLDNMCSIYNLKSREGNVKV--------SRELSAHTGYLSCCRFLDDNNIVTSSG 162
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418
D T +W G GH +LA+S D+ + + K E + +
Sbjct: 163 DTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVR-EGTCRQT 221
Query: 419 LAKYQAQ----C--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI---NCVEFS 469
+++ C P GE + +GSDD + L++ +++ + H+ +I V FS
Sbjct: 222 FTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELIC--FSHESIICGITSVAFS 279
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
GR++ + D + +WD + + L GH V + ++D + +GS DS LK+W
Sbjct: 280 LSGRLLFAGYDDFNCNVWDSMKSERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Query: 530 N 530
N
Sbjct: 340 N 340
Score = 202 (76.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 71/298 (23%), Positives = 126/298 (42%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
+RGH I A+ W + S+ +DG + +WD + V + + V +
Sbjct: 51 LRGHLAKIYAMHWAT-----DSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 348 GGSG-LIYSASQDRTIKVW--RASDG--VMCRTLEGHAHWVNTLALSTDYLMRVEATSTG 402
SG + D ++ ++ +G + R L H +++ D + + T
Sbjct: 106 APSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTT 165
Query: 403 GFKYDPANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
+D ++ K + C P+ +SG+ D + LW+ +E
Sbjct: 166 CALWDIETGQQ--KTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDV-REGTCRQTF 222
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAWSSDS 514
TGH+ IN + F P+G I + S D S +L+D R + + + + VA+S
Sbjct: 223 TGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELICFSHESIICGITSVAFSLSG 282
Query: 515 RLLVSGSADSTLKVWN-MKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
RLL +G D VW+ MK++++ L GH + V + DG VA+G D L++W
Sbjct: 283 RLLFAGYDDFNCNVWDSMKSERVGI-LSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Score = 196 (74.1 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 55/208 (26%), Positives = 96/208 (46%)
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK-HAL---AKYQAQC--- 426
RTL GH + + +TD + V A+ G K + ++K HA+ + + C
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDG--KLIVWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEK---KSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
P G + G D ++N + + K ++ H ++C F D I+ S+ D +
Sbjct: 107 PSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTT 165
Query: 484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
LWD G+ T GH +A S D L +SG+ D++ K+W+++ Q GH
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++ A+ + P+GE + +G D RL+
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLF 253
Score = 192 (72.6 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 71/324 (21%), Positives = 136/324 (41%)
Query: 180 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ 239
+ ++V + V +V+ TR T + GH + ++ ++ + + L S S D + WD T
Sbjct: 30 LAELVSGLEVVGRVQMRTRRT--LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTT 87
Query: 240 TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV--IHAWDSSTGK-QIGQPMRGHKQWIT 296
+ WV+ A++P + G + + I+ S G ++ + + H +++
Sbjct: 88 NKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLS 147
Query: 297 ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYS 355
+ L+ SSG D +WD+ Q V HT + L S
Sbjct: 148 CCRF----LDDN-NIVTSSG-DTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFIS 201
Query: 356 ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-----YDPAN 410
+ D + K+W +G +T GH +N + + EA TG +D
Sbjct: 202 GACDASAKLWDVREGTCRQTFTGHESDINAIC----FFPNGEAICTGSDDASCRLFDLRA 257
Query: 411 PEE----SSKHALAKYQ--AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN 464
+E S + + A G L +G DDF +W+ K ++ + ++GH ++
Sbjct: 258 DQELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKSER-VGILSGHDNRVS 316
Query: 465 CVEFSPDGRIIASASFDKSIKLWD 488
C+ + DG +A+ S+D +K+W+
Sbjct: 317 CLGVTADGMAVATGSWDSFLKIWN 340
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 70/312 (22%), Positives = 126/312 (40%)
Query: 83 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ 142
+ ++V + V +V+ TR T + GH + ++ ++ + + L S S D + WD T
Sbjct: 30 LAELVSGLEVVGRVQMRTRRT--LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTT 87
Query: 143 TPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS 202
K P T + + L + + I K V+ V+R S+
Sbjct: 88 N---KVHAIPLRSSWVMTCAYAPSGNFVACGGL--DNMCSIYNLKSREGNVK-VSRELSA 141
Query: 203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
G+ +F + ++ + SGDTT WD+ T GH + +A SPD
Sbjct: 142 HTGYLSCC---RFLDDN-NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFN 197
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
+SG + WD G Q GH+ I A+ + P N + + D + R
Sbjct: 198 LFISGACDASAKLWDVREGT-CRQTFTGHESDINAICFFP---NGEA--ICTGSDDASCR 251
Query: 323 IWDVILSQCVRVLTSHTR--SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGH 379
++D+ Q + + + +T + + SG L+++ D VW + L GH
Sbjct: 252 LFDLRADQELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKSERVGILSGH 311
Query: 380 AHWVNTLALSTD 391
+ V+ L ++ D
Sbjct: 312 DNRVSCLGVTAD 323
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 258 (95.9 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 72/224 (32%), Positives = 113/224 (50%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPY-LFYVNETEIT 163
++ GH+ V S FSP+ + L SGS D TVR W + T T L +G + ++ V+ + +
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLG 579
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
A T + ++ + + ++ +R GH V V F PNG +
Sbjct: 580 HYFA------TASHDQTARL-WSCDHIYPLR-------IFAGHLNDVDCVSFHPNGCYVF 625
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
+GS D T R WDV+T + GH V+ IA PD + L +G ++G+I+ WD TGK+
Sbjct: 626 TGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKR 685
Query: 284 IGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ Q MRGH K I +LS+ + + S G D +R+WD+
Sbjct: 686 LKQ-MRGHGKNAIYSLSY-----SKEGNVLISGGADHTVRVWDL 723
Score = 235 (87.8 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 61/205 (29%), Positives = 97/205 (47%)
Query: 373 CRTLEGHAHWVNTLALSTD--YLMRVEATSTGG-FKYDPANPEESSK-HALAKYQAQ-CP 427
C+TL GH+ V + + S D YL+ T + D S K H + P
Sbjct: 518 CKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSP 577
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
G + S D T LW+ + L GH ++CV F P+G + + S DK+ ++W
Sbjct: 578 LGHYFATASHDQTARLWSCD-HIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMW 636
Query: 488 DGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG-DE 546
D G + GH V +A D R L +GS D + VW++ T K + + GHG +
Sbjct: 637 DVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNA 696
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
+Y++ ++ +G + SGG D +R+W
Sbjct: 697 IYSLSYSKEGNVLISGGADHTVRVW 721
Score = 192 (72.6 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 55/212 (25%), Positives = 95/212 (44%)
Query: 333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST- 390
+ L H+ +V + + S S+D+T+++W + +GH H V ++ S
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 391 -DYLMRVEATSTGG-FKYDPANPEESSKHALAKYQAQC--PEGEKLVSGSDDFTLFLWNP 446
Y T + D P L P G + +GS D T +W+
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV 638
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ-AV 505
S+ GH + + PDGR +++ S D I +WD GK + +RGH + A+
Sbjct: 639 STGD-SVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAI 697
Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE 537
Y +++S + +L+SG AD T++VW++K E
Sbjct: 698 YSLSYSKEGNVLISGGADHTVRVWDLKKATTE 729
Score = 163 (62.4 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 445 NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
N + E + + GH + FSPD + + S S DK+++LW + + +GH
Sbjct: 510 NDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHP 569
Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK 564
V+ V++S + S D T ++W+ + GH ++V V + P+G V +G
Sbjct: 570 VWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSS 629
Query: 565 DKVLRLW 571
DK R+W
Sbjct: 630 DKTCRMW 636
Score = 138 (53.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 44/206 (21%), Positives = 89/206 (43%)
Query: 290 GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG 349
GH + + S+ P + + S +D +R+W + + H V + +
Sbjct: 523 GHSGTVYSTSFSPDN-----KYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSP 577
Query: 350 SGLIYS-ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408
G ++ AS D+T ++W R GH + V+ ++ + +S +
Sbjct: 578 LGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWD 637
Query: 409 ANPEESSK----HALAKYQ-AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH-QQL 462
+ +S + H A CP+G L +GS+D + +W+ K+ L +M GH +
Sbjct: 638 VSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKR-LKQMRGHGKNA 696
Query: 463 INCVEFSPDGRIIASASFDKSIKLWD 488
I + +S +G ++ S D ++++WD
Sbjct: 697 IYSLSYSKEGNVLISGGADHTVRVWD 722
Score = 126 (49.4 bits), Expect = 0.00025, P = 0.00025
Identities = 44/135 (32%), Positives = 60/135 (44%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH V V F PNG + +GS D T R WDV+T G ++ T ++A
Sbjct: 607 GHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVST--------GDSVRLFLGHTAPVISIA 658
Query: 168 DVLPLDT-LNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAE-AVISVKFSPNGRSLASG 225
V P L+T I+ V+ + R M GH + A+ S+ +S G L SG
Sbjct: 659 -VCPDGRWLSTGSEDGIIN----VWDIGTGKRL-KQMRGHGKNAIYSLSYSKEGNVLISG 712
Query: 226 SGDTTVRFWDVTTQT 240
D TVR WD+ T
Sbjct: 713 GADHTVRVWDLKKAT 727
Score = 43 (20.2 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 309 CRRFASSGKDGAIRIWDV---ILSQCVRVLTSHTRSV--TCIRW-GGSGLIYSAS 357
CR A+ +D I+IW + L+ L ++ + TC G SG +YS S
Sbjct: 478 CRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTS 532
Score = 42 (19.8 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 17/73 (23%), Positives = 32/73 (43%)
Query: 67 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 126
KT D L L+ +E D + K Q+ + C + + + + FS + R A
Sbjct: 426 KTALD-LKLEIQKVKESRDAI--KLDNLQLALPSVCMYTFQNTNKDMSCLDFSDDCRIAA 482
Query: 127 SGSGDTTVRFWDV 139
+G D+ ++ W +
Sbjct: 483 AGFQDSYIKIWSL 495
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 251 (93.4 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 93/335 (27%), Positives = 154/335 (45%)
Query: 244 KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF 303
+C H W+ I + + +++G + W S GK I + GH + ++W
Sbjct: 96 QCMFHDDWISSIKGAEE--WILTGSYDKTSRIW-SLEGKSI-MTIVGHTDVVKDVAWVKK 151
Query: 304 HLNHQCRRFASSGKDGAIRIWDVILSQC-VRVL---TSHTRSVTCIRWGGSGLIY-SASQ 358
+ C ++S D I +W+ + + V+ L H SV I GSG + S S
Sbjct: 152 D-SLSCLLLSAS-MDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSW 209
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418
D+ +K+W T E + + ST+ + + T G P S H
Sbjct: 210 DKMLKIWSTVP-----TDEE-----DEMEESTNRPRKKQKTEQLGLTRTPI--VTLSGHM 257
Query: 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
A + E++ S S D T+ +W+ E + +TG++ + NC+ +SP + +AS
Sbjct: 258 EAVSSVLWSDAEEICSASWDHTIRVWDVESGSLK-STLTGNK-VFNCISYSPLCKRLASG 315
Query: 479 SFDKSIKLWDGRI--GKFIT-TLRGHVQAVYMVAWS-SDSRLLVSGSADSTLKVWNMKTK 534
S D+ I+LWD R G ++ +L H V V WS + + L+SGS D+ +K+W+ ++
Sbjct: 316 STDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSC 375
Query: 535 KIE-QDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
K DL H D+V +VDW G + SGG D L
Sbjct: 376 KAPLYDLAAHEDKVLSVDWTDTG-LLLSGGADNKL 409
Score = 210 (79.0 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 56/194 (28%), Positives = 91/194 (46%)
Query: 178 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 237
EE + +KQ Q+ ++ GH EAV SV +S + + S S D T+R WDV
Sbjct: 228 EESTNRPRKKQKTEQLGLTRTPIVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVE 286
Query: 238 TQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST--GKQIGQPMRGHKQWI 295
+ + G+K + CI++SP K+L SG + I WD T G + + H W+
Sbjct: 287 SGSLKSTLTGNKVFN-CISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWV 345
Query: 296 TALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-VRVLTSHTRSVTCIRWGGSGLIY 354
T++ W P H ++ S D +++WD + + L +H V + W +GL+
Sbjct: 346 TSVKWSPTHE----QQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLL 401
Query: 355 SASQDRTIKVWRAS 368
S D + +R S
Sbjct: 402 SGGADNKLYSYRYS 415
Score = 193 (73.0 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 103/430 (23%), Positives = 179/430 (41%)
Query: 12 RILTRFKSDDGEVAGDLLDLPLNV----NTEHLSLIVNSLLQ-QDEGTPYL---FYVNET 63
++ TRF +D+ + A D D+P ++ LS I+N LL+ ++E ++ F +
Sbjct: 3 QLQTRFYTDNKKYAVD--DVPFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQ 60
Query: 64 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 123
+ L + ++ +++EEVV+I Y ++ + +C H + + S+K +
Sbjct: 61 FLRMPLDKHMEMENISSEEVVEIEYVEK--YTAPQPEQCMF----HDDWISSIKGAEEW- 113
Query: 124 SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183
+ +GS D T R W + ++ + G + V + K D L L+ I
Sbjct: 114 -ILTGSYDKTSRIWSLEGKS-IMTIVG--HTDVVKDVAWVKK--DSLSCLLLSASMDQTI 167
Query: 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT------ 237
+ + V R + GHA +V S+ +G SGS D ++ W
Sbjct: 168 LLWEWNV--ERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEED 225
Query: 238 --------------------TQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
T+TP+ GH V + WS D++++ S + I WD
Sbjct: 226 EMEESTNRPRKKQKTEQLGLTRTPIVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWD 284
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV--- 334
+G + + G+K + +S+ P C+R AS D IR+WD V
Sbjct: 285 VESGS-LKSTLTGNKVF-NCISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLS 337
Query: 335 LTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
LTSHT VT ++W + + S S D +K+W D C+ + LA D
Sbjct: 338 LTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW---DTRSCKAP------LYDLAAHEDK 388
Query: 393 LMRVEATSTG 402
++ V+ T TG
Sbjct: 389 VLSVDWTDTG 398
Score = 187 (70.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 72/271 (26%), Positives = 124/271 (45%)
Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRW----GGSGLIYSASQDRTIKVWRASDGVMC 373
D RIW + + + + HT V + W S L+ SAS D+TI +W + +
Sbjct: 120 DKTSRIWS-LEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWN---VE 175
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV 433
R H A S D + A G K+ + ++ + K + P E+
Sbjct: 176 RNKVKALHCCRGHAGSVDSI----AVDGSGTKFCSGSWDK-----MLKIWSTVPTDEE-- 224
Query: 434 SGSDDFTLFLWNPEKEKKS----LAR-----MTGHQQLINCVEFSPDGRIIASASFDKSI 484
D+ P K++K+ L R ++GH + ++ V +S D I SAS+D +I
Sbjct: 225 ---DEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHMEAVSSVLWS-DAEEICSASWDHTI 280
Query: 485 KLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK---IEQDLP 541
++WD G +TL G+ + +++S + L SGS D +++W+ +TK + L
Sbjct: 281 RVWDVESGSLKSTLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLT 339
Query: 542 GHGDEVYAVDWAPDGEK-VASGGKDKVLRLW 571
H V +V W+P E+ + SG D +++LW
Sbjct: 340 SHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Score = 149 (57.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 55/208 (26%), Positives = 97/208 (46%)
Query: 81 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 140
EE + +KQ Q+ ++ GH EAV SV +S + + S S D T+R WDV
Sbjct: 228 EESTNRPRKKQKTEQLGLTRTPIVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVE 286
Query: 141 TQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT 200
+ + G ++ + + K LA +T+ + + + + + +
Sbjct: 287 SGSLKSTLTGNKVFNCISYSPLCKRLASG------STDRHIRLWDPR-----TKDGSLVS 335
Query: 201 SSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWS 258
S+ H V SVK+SP + + L SGS D V+ WD + + PL+ H+ VL + W+
Sbjct: 336 LSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT 395
Query: 259 PDSKQLVSGCKNGVIHAWD-SSTGKQIG 285
D+ L+SG + ++++ S T +G
Sbjct: 396 -DTGLLLSGGADNKLYSYRYSPTTSHVG 422
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 37/104 (35%), Positives = 55/104 (52%)
Query: 475 IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW-SSDSR--LLVSGSADSTLKVW-- 529
I + S+DK+ ++W GK I T+ GH V VAW DS LL+S S D T+ +W
Sbjct: 114 ILTGSYDKTSRIWSLE-GKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEW 172
Query: 530 NMKTKKIE--QDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
N++ K++ GH V ++ G K SG DK+L++W
Sbjct: 173 NVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIW 216
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 251 (93.4 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 91/335 (27%), Positives = 155/335 (46%)
Query: 244 KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF 303
+C H W+ I + + +++G + W SS GK I + GH + ++W
Sbjct: 96 QCMFHDDWISAIEGAEE--WILTGSYDKTSRIW-SSEGKSI-MTIVGHTDVVKDVAWVKK 151
Query: 304 HLNHQCRRFASSGKDGAIRIWDVILSQC-VRVL---TSHTRSVTCIRWGGSGLIY-SASQ 358
+ C ++S D I +W+ + + V+ L H SV I +G + S S
Sbjct: 152 D-SLSCLLLSAS-MDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTRFCSGSW 209
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418
D+ +K+W T E + + ST+ + + T G P K A
Sbjct: 210 DKMLKIWSTVP-----TDEE-----DEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHKEA 259
Query: 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
++ + E++ S S D T+ +W+ E + +TG++ + NC+ +SP + +AS
Sbjct: 260 ISS--VLWSDAEEICSASWDHTIGVWDVESGSLK-STLTGNK-VFNCISYSPLCKRLASG 315
Query: 479 SFDKSIKLWDGRI--GKFIT-TLRGHVQAVYMVAWS-SDSRLLVSGSADSTLKVWNMKTK 534
S D+ I+LWD R G ++ +L H V V WS + + L+SGS D+ +K+W+ ++
Sbjct: 316 STDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSC 375
Query: 535 KIE-QDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
K DL H D+V +VDW G + SGG D L
Sbjct: 376 KAPLYDLAAHEDKVLSVDWTNTG-LLLSGGADNKL 409
Score = 203 (76.5 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 54/194 (27%), Positives = 90/194 (46%)
Query: 178 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 237
EE + +KQ Q+ ++ GH EA+ SV +S + + S S D T+ WDV
Sbjct: 228 EESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIGVWDVE 286
Query: 238 TQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST--GKQIGQPMRGHKQWI 295
+ + G+K + CI++SP K+L SG + I WD T G + + H W+
Sbjct: 287 SGSLKSTLTGNKVFN-CISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWV 345
Query: 296 TALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-VRVLTSHTRSVTCIRWGGSGLIY 354
T++ W P H ++ S D +++WD + + L +H V + W +GL+
Sbjct: 346 TSVKWSPTHE----QQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTNTGLLL 401
Query: 355 SASQDRTIKVWRAS 368
S D + +R S
Sbjct: 402 SGGADNKLYSYRYS 415
Score = 186 (70.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 101/430 (23%), Positives = 179/430 (41%)
Query: 12 RILTRFKSDDGEVAGDLLDLPLNV----NTEHLSLIVNSLLQ-QDEGTPYL---FYVNET 63
++ TRF +D+ + A D D+P ++ LS I+N LL+ ++E ++ F +
Sbjct: 3 QLQTRFFTDNKKYAVD--DVPFSIPAASEIADLSNIINKLLEAKNEFHKHVEFDFLIKGQ 60
Query: 64 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 123
+ L + L+ +++EEVV++ Y ++ + +C H + + +++ +
Sbjct: 61 FLRMPLFKHMELENISSEEVVELEYVEK--YTAPQPEQCMF----HDDWISAIEGAEEW- 113
Query: 124 SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183
+ +GS D T R W ++ + G + V + K D L L+ I
Sbjct: 114 -ILTGSYDKTSRIWSSEGKS-IMTIVG--HTDVVKDVAWVKK--DSLSCLLLSASMDQTI 167
Query: 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT------ 237
+ + V R + GHA +V S+ G SGS D ++ W
Sbjct: 168 LLWEWNV--ERNKVKALHCCRGHAGSVDSIAVDSTGTRFCSGSWDKMLKIWSTVPTDEED 225
Query: 238 --------------------TQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
T+TP+ GHK + + WS D++++ S + I WD
Sbjct: 226 EMEESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIGVWD 284
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV--- 334
+G + + G+K + +S+ P C+R AS D IR+WD V
Sbjct: 285 VESGS-LKSTLTGNKVF-NCISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLS 337
Query: 335 LTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
LTSHT VT ++W + + S S D +K+W D C+ + LA D
Sbjct: 338 LTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW---DTRSCKAP------LYDLAAHEDK 388
Query: 393 LMRVEATSTG 402
++ V+ T+TG
Sbjct: 389 VLSVDWTNTG 398
Score = 182 (69.1 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 74/275 (26%), Positives = 130/275 (47%)
Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRW----GGSGLIYSASQDRTIKVWRAS-DGVM 372
D RIW + + + HT V + W S L+ SAS D+TI +W + +
Sbjct: 120 DKTSRIWSSE-GKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNK 178
Query: 373 CRTLE---GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG 429
+ L GHA V+++A V++T T ++ + ++ + K + P
Sbjct: 179 VKALHCCRGHAGSVDSIA--------VDSTGT---RFCSGSWDK-----MLKIWSTVPTD 222
Query: 430 EKLVSGSDDFTLFLWNPEKEKKS----LAR-----MTGHQQLINCVEFSPDGRIIASASF 480
E+ D+ P K++K+ L R ++GH++ I+ V +S D I SAS+
Sbjct: 223 EE-----DEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASW 276
Query: 481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK---IE 537
D +I +WD G +TL G+ + +++S + L SGS D +++W+ +TK +
Sbjct: 277 DHTIGVWDVESGSLKSTLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVS 335
Query: 538 QDLPGHGDEVYAVDWAPDGEK-VASGGKDKVLRLW 571
L H V +V W+P E+ + SG D +++LW
Sbjct: 336 LSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Score = 148 (57.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 39/120 (32%), Positives = 62/120 (51%)
Query: 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW-SSDSR-- 515
H I+ +E + + I + S+DK+ ++W GK I T+ GH V VAW DS
Sbjct: 100 HDDWISAIEGAEEW--ILTGSYDKTSRIWSSE-GKSIMTIVGHTDVVKDVAWVKKDSLSC 156
Query: 516 LLVSGSADSTLKVW--NMKTKKIE--QDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
LL+S S D T+ +W N++ K++ GH V ++ G + SG DK+L++W
Sbjct: 157 LLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTRFCSGSWDKMLKIW 216
Score = 136 (52.9 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 52/207 (25%), Positives = 89/207 (42%)
Query: 81 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 140
EE + +KQ Q+ ++ GH EA+ SV +S + + S S D T+ WDV
Sbjct: 228 EESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIGVWDVE 286
Query: 141 TQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT 200
+ + G ++ + + K LA +T+ + + + + + +
Sbjct: 287 SGSLKSTLTGNKVFNCISYSPLCKRLASG------STDRHIRLWDPR-----TKDGSLVS 335
Query: 201 SSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWS 258
S+ H V SVK+SP + + L SGS D V+ WD + + PL+ H+ VL + W+
Sbjct: 336 LSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT 395
Query: 259 PDSKQLVSGCKNGVIHAWDSSTGKQIG 285
L G N + S T +G
Sbjct: 396 NTGLLLSGGADNKLYSYRYSPTTSHVG 422
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 254 (94.5 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 64/233 (27%), Positives = 121/233 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + + S +D +I+IWD +C++VLT HT SV C+++ +I + S D T++V
Sbjct: 231 LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRV 289
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G + TL H V L S ++ + +D A+ + + + L ++
Sbjct: 290 WDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAV-WDMASATDITLRRVLVGHR 348
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +W+ + + + GH++ I C+++ R++ S S
Sbjct: 349 AAVNVVDFDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 405
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW+++
Sbjct: 406 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 456
Score = 241 (89.9 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 80/299 (26%), Positives = 139/299 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D +++SG ++ I WD S+ + + + + GH + L ++ R
Sbjct: 228 VYCLQYDDD--KIISGLRDNSIKIWDKSSLECL-KVLTGHTGSVLCLQYDE-------RV 277
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW---RAS 368
+ D +R+WDV + + L H +V +R+ +GL+ + S+DR+I VW A+
Sbjct: 278 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTCSKDRSIAVWDMASAT 336
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLM--------RVEATSTGGFKYDPANPEESSKHALA 420
D + R L GH VN + Y++ +V +TST F K +A
Sbjct: 337 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEF----VRTLNGHKRGIA 392
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++
Sbjct: 393 CLQYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAY 446
Query: 481 DKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
D IK+WD + + TL H V+ + + D ++S S D T+ +W+
Sbjct: 447 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 503
Score = 232 (86.7 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 67/248 (27%), Positives = 125/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q ++ + +++ V C+++ +I S +D +IK+W S + L GH V L L
Sbjct: 216 QRIQCRSENSKGVYCLQYDDDKII-SGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQ 272
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + V +S + N E H A + G +V+ S D ++ +W+
Sbjct: 273 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-LMVTCSKDRSIAVWD 331
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W +F+ TL GH +
Sbjct: 332 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 389
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 390 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 445
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 446 YDGKIKVW 453
Score = 219 (82.2 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV T L H VL + +S
Sbjct: 257 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 314
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S+T + + + GH+ + + ++ ++ ++SG
Sbjct: 315 --NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 366
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 367 -DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 424
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 425 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 482
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + ++S S D T+ +W+
Sbjct: 483 LQFDEFQ-IISSSHDDTILIWD 503
Score = 194 (73.4 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 72/282 (25%), Positives = 127/282 (45%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+ SG D +++ WD ++ L GH VLC+ + D + +V+G + + WD +TG
Sbjct: 238 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTG 295
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSH 338
+ + + H + + HL + KD +I +WD+ + + RVL H
Sbjct: 296 EVLNTLIH-HNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 347
Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
+V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 348 RAAVNVVDFDDKYIV-SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLV-VSG 404
Query: 399 TSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------PEK 448
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 405 SSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 463
Query: 449 EKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F + +II+S S D +I +WD
Sbjct: 464 PASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWD 503
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 50/182 (27%), Positives = 83/182 (45%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C + GH +V+ +++ R + +GS D+TVR WDV T L T L + NE
Sbjct: 257 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVL----NT--LIHHNEAV 308
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS--MPGHAEAVISVKFSPNG 219
+ ++ L + T + + + AV+ + T T + GH AV V F +
Sbjct: 309 LHLRFSNGLMV-TCSKDRSI-------AVWDMASATDITLRRVLVGHRAAVNVVDF--DD 358
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + S SGD T++ W +T + GHK + C+ + + +VSG + I WD
Sbjct: 359 KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 416
Query: 280 TG 281
G
Sbjct: 417 CG 418
Score = 144 (55.7 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 383 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 438
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 439 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDT 498
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 499 ILIWDFL 505
Score = 48 (22.0 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 17/75 (22%), Positives = 35/75 (46%)
Query: 125 LASGSGDTTVRFWDVTTQTPLFKCEGTP----YLFYVNETEITKTLADVLPLDTLNTEEV 180
+ SG D +++ WD ++ L G L Y +T + + + +NT EV
Sbjct: 238 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEV 297
Query: 181 VD-IVYQKQAVFQVR 194
++ +++ +AV +R
Sbjct: 298 LNTLIHHNEAVLHLR 312
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 233 (87.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 86/313 (27%), Positives = 138/313 (44%)
Query: 246 EGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGK-QIGQP---MRGHKQWITALSW 300
+GH WV IA +P ++ S ++ I W + + G P +RGH +++ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV-- 69
Query: 301 EPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQ 358
+ +FA SG DG +R+WD+ R HT+ V + + I S S+
Sbjct: 70 ----VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 359 DRTIKVWRASDGVMCRTL--EGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPE 412
D+TIK+W GV T+ E H+ WV+ + S + + S G K ++ AN +
Sbjct: 126 DKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVKVWNLANCK 183
Query: 413 ESSKH----ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
+ H P+G SG D LW+ E K L + G +IN + F
Sbjct: 184 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN-EGKHLYTLDGGD-IINALCF 241
Query: 469 SPDGRIIASASFDKSIKLWDGRIGKFI----------TTLRGHVQAVYMVAWSSDSRLLV 518
SP+ R A+ SIK+WD GK I T+ + +AWS+D + L
Sbjct: 242 SPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF 299
Query: 519 SGSADSTLKVWNM 531
+G D+ ++VW +
Sbjct: 300 AGYTDNLVRVWQV 312
Score = 212 (79.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 68/250 (27%), Positives = 116/250 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH+ V V S +G+ SGS D T+R WD+TT T + GH VL +A+S D+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 117
Query: 262 KQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
+Q+VSG ++ I W++ K Q H +W++ + + P N S G D
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSP---NSSNPIIVSCGWDKL 173
Query: 321 IRIWDVILSQCVRVLTSH---TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
+++W+ L+ C ++ T+H T + + G L S +D +W ++G TL
Sbjct: 174 VKVWN--LANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP---EESSKHALA-KYQAQCPEGEKL 432
+G +N L S + AT +D +E + ++ +A+ P+ L
Sbjct: 231 DG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 289
Query: 433 VSGSDDFTLF 442
+D TLF
Sbjct: 290 AWSADGQTLF 299
Score = 208 (78.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 67/211 (31%), Positives = 99/211 (46%)
Query: 375 TLEGHAHWVNTLALST---DYLMRVEATST---GGFKYDPAN---PEESSK-HA-LAKYQ 423
TL+GH WV +A + D ++ T D N P+ + + H+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
+G+ +SGS D TL LW+ + R GH + + V FS D R I S S DK+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTT-RRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 484 IKLWDGR-IGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKTKKIEQDL 540
IKLW+ + K+ H + V V +S +S ++VS D +KVWN+ K++ +
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH + V +PDG ASGGKD LW
Sbjct: 189 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 219
Score = 199 (75.1 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 73/309 (23%), Positives = 129/309 (41%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-----VRVLTSHTRSV 342
++GH W+T ++ P + S+ +D I +W + + R L H+ V
Sbjct: 11 LKGHNGWVTQIATTPQFPD----MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT-- 399
+ + G S S D T+++W + G R GH V ++A S+D V +
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 400 -------STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
+ G KY + S + ++ +VS D + +WN K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS-SNPIIVSCGWDKLVKVWNLANCKLK 185
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
+ GH +N V SPDG + AS D LWD GK + TL G + + +S
Sbjct: 186 TNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSP 243
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLP---------GHGDEVYAVDWAPDGEKVASGG 563
+ L + + S +K+W+++ K I +L + ++ W+ DG+ + +G
Sbjct: 244 NRYWLCAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 302
Query: 564 KDKVLRLWQ 572
D ++R+WQ
Sbjct: 303 TDNLVRVWQ 311
Score = 173 (66.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 71/276 (25%), Positives = 118/276 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH+ V V S +G+ SGS D T+R WD+TT GT +V T+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT--------GTTTRRFVGHTK--- 106
Query: 165 TLADVLPLD-TLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS- 221
DVL + + + ++V K ++ V + T H+E V V+FSPN +
Sbjct: 107 ---DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 163
Query: 222 -LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ S D V+ W++ GH ++ + SPD SG K+G WD +
Sbjct: 164 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 223
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK----DGAIRIWDVILSQCVRVLT 336
GK + + G I AL + P + C S K +G I I D + + + +
Sbjct: 224 GKHL-YTLDGG-DIINALCFSP-NRYWLCAATGPSIKIWDLEGKI-IVDELKQEVISTSS 279
Query: 337 -SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDG 370
+ T + W G +++ D ++VW+ + G
Sbjct: 280 KAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 57/239 (23%), Positives = 98/239 (41%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
T GH + V+SV FS + R + SGS D T++ W+ L C+ T V +
Sbjct: 98 TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-----LGVCKYT-----VQDESH 147
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT--SSMPGHAEAVISVKFSPNGR 220
++ ++ V + +V + K + +V + C ++ GH + +V SP+G
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDK--LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEG-----------HKHWVLCIAWSPDSKQLVSGCK 269
ASG D WD+ L+ +G +++W LC A P K + +
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW-LCAATGPSIK--IWDLE 262
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
+I D + I + T+L+W + Q FA D +R+W V +
Sbjct: 263 GKIIV--DELKQEVISTSSKAEPPQCTSLAWSA---DGQTL-FAGY-TDNLVRVWQVTI 314
Score = 40 (19.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 468 FSPDGRIIASASFDKSIKLWDGRIG 492
+S DG+ + + D +++W IG
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 233 (87.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 86/313 (27%), Positives = 138/313 (44%)
Query: 246 EGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGK-QIGQP---MRGHKQWITALSW 300
+GH WV IA +P ++ S ++ I W + + G P +RGH +++ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV-- 69
Query: 301 EPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQ 358
+ +FA SG DG +R+WD+ R HT+ V + + I S S+
Sbjct: 70 ----VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 359 DRTIKVWRASDGVMCRTL--EGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPE 412
D+TIK+W GV T+ E H+ WV+ + S + + S G K ++ AN +
Sbjct: 126 DKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVKVWNLANCK 183
Query: 413 ESSKH----ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
+ H P+G SG D LW+ E K L + G +IN + F
Sbjct: 184 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN-EGKHLYTLDGGD-IINALCF 241
Query: 469 SPDGRIIASASFDKSIKLWDGRIGKFI----------TTLRGHVQAVYMVAWSSDSRLLV 518
SP+ R A+ SIK+WD GK I T+ + +AWS+D + L
Sbjct: 242 SPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF 299
Query: 519 SGSADSTLKVWNM 531
+G D+ ++VW +
Sbjct: 300 AGYTDNLVRVWQV 312
Score = 212 (79.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 68/250 (27%), Positives = 116/250 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH+ V V S +G+ SGS D T+R WD+TT T + GH VL +A+S D+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 117
Query: 262 KQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
+Q+VSG ++ I W++ K Q H +W++ + + P N S G D
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSP---NSSNPIIVSCGWDKL 173
Query: 321 IRIWDVILSQCVRVLTSH---TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
+++W+ L+ C ++ T+H T + + G L S +D +W ++G TL
Sbjct: 174 VKVWN--LANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP---EESSKHALA-KYQAQCPEGEKL 432
+G +N L S + AT +D +E + ++ +A+ P+ L
Sbjct: 231 DG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 289
Query: 433 VSGSDDFTLF 442
+D TLF
Sbjct: 290 AWSADGQTLF 299
Score = 208 (78.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 67/211 (31%), Positives = 99/211 (46%)
Query: 375 TLEGHAHWVNTLALST---DYLMRVEATST---GGFKYDPAN---PEESSK-HA-LAKYQ 423
TL+GH WV +A + D ++ T D N P+ + + H+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
+G+ +SGS D TL LW+ + R GH + + V FS D R I S S DK+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTT-RRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 484 IKLWDGR-IGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKTKKIEQDL 540
IKLW+ + K+ H + V V +S +S ++VS D +KVWN+ K++ +
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH + V +PDG ASGGKD LW
Sbjct: 189 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 219
Score = 199 (75.1 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 73/309 (23%), Positives = 129/309 (41%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-----VRVLTSHTRSV 342
++GH W+T ++ P + S+ +D I +W + + R L H+ V
Sbjct: 11 LKGHNGWVTQIATTPQFPD----MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT-- 399
+ + G S S D T+++W + G R GH V ++A S+D V +
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 400 -------STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
+ G KY + S + ++ +VS D + +WN K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS-SNPIIVSCGWDKLVKVWNLANCKLK 185
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
+ GH +N V SPDG + AS D LWD GK + TL G + + +S
Sbjct: 186 TNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSP 243
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLP---------GHGDEVYAVDWAPDGEKVASGG 563
+ L + + S +K+W+++ K I +L + ++ W+ DG+ + +G
Sbjct: 244 NRYWLCAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 302
Query: 564 KDKVLRLWQ 572
D ++R+WQ
Sbjct: 303 TDNLVRVWQ 311
Score = 173 (66.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 71/276 (25%), Positives = 118/276 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH+ V V S +G+ SGS D T+R WD+TT GT +V T+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT--------GTTTRRFVGHTK--- 106
Query: 165 TLADVLPLD-TLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS- 221
DVL + + + ++V K ++ V + T H+E V V+FSPN +
Sbjct: 107 ---DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 163
Query: 222 -LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ S D V+ W++ GH ++ + SPD SG K+G WD +
Sbjct: 164 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 223
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK----DGAIRIWDVILSQCVRVLT 336
GK + + G I AL + P + C S K +G I I D + + + +
Sbjct: 224 GKHL-YTLDGG-DIINALCFSP-NRYWLCAATGPSIKIWDLEGKI-IVDELKQEVISTSS 279
Query: 337 -SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDG 370
+ T + W G +++ D ++VW+ + G
Sbjct: 280 KAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 57/239 (23%), Positives = 98/239 (41%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
T GH + V+SV FS + R + SGS D T++ W+ L C+ T V +
Sbjct: 98 TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-----LGVCKYT-----VQDESH 147
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT--SSMPGHAEAVISVKFSPNGR 220
++ ++ V + +V + K + +V + C ++ GH + +V SP+G
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDK--LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEG-----------HKHWVLCIAWSPDSKQLVSGCK 269
ASG D WD+ L+ +G +++W LC A P K + +
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW-LCAATGPSIK--IWDLE 262
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
+I D + I + T+L+W + Q FA D +R+W V +
Sbjct: 263 GKIIV--DELKQEVISTSSKAEPPQCTSLAWSA---DGQTL-FAGY-TDNLVRVWQVTI 314
Score = 40 (19.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 468 FSPDGRIIASASFDKSIKLWDGRIG 492
+S DG+ + + D +++W IG
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 233 (87.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 86/313 (27%), Positives = 138/313 (44%)
Query: 246 EGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGK-QIGQP---MRGHKQWITALSW 300
+GH WV IA +P ++ S ++ I W + + G P +RGH +++ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV-- 69
Query: 301 EPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQ 358
+ +FA SG DG +R+WD+ R HT+ V + + I S S+
Sbjct: 70 ----VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 359 DRTIKVWRASDGVMCRTL--EGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPE 412
D+TIK+W GV T+ E H+ WV+ + S + + S G K ++ AN +
Sbjct: 126 DKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVKVWNLANCK 183
Query: 413 ESSKH----ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
+ H P+G SG D LW+ E K L + G +IN + F
Sbjct: 184 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN-EGKHLYTLDGGD-IINALCF 241
Query: 469 SPDGRIIASASFDKSIKLWDGRIGKFI----------TTLRGHVQAVYMVAWSSDSRLLV 518
SP+ R A+ SIK+WD GK I T+ + +AWS+D + L
Sbjct: 242 SPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF 299
Query: 519 SGSADSTLKVWNM 531
+G D+ ++VW +
Sbjct: 300 AGYTDNLVRVWQV 312
Score = 212 (79.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 68/250 (27%), Positives = 116/250 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH+ V V S +G+ SGS D T+R WD+TT T + GH VL +A+S D+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 117
Query: 262 KQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
+Q+VSG ++ I W++ K Q H +W++ + + P N S G D
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSP---NSSNPIIVSCGWDKL 173
Query: 321 IRIWDVILSQCVRVLTSH---TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
+++W+ L+ C ++ T+H T + + G L S +D +W ++G TL
Sbjct: 174 VKVWN--LANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP---EESSKHALA-KYQAQCPEGEKL 432
+G +N L S + AT +D +E + ++ +A+ P+ L
Sbjct: 231 DG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 289
Query: 433 VSGSDDFTLF 442
+D TLF
Sbjct: 290 AWSADGQTLF 299
Score = 208 (78.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 67/211 (31%), Positives = 99/211 (46%)
Query: 375 TLEGHAHWVNTLALST---DYLMRVEATST---GGFKYDPAN---PEESSK-HA-LAKYQ 423
TL+GH WV +A + D ++ T D N P+ + + H+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
+G+ +SGS D TL LW+ + R GH + + V FS D R I S S DK+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTT-RRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 484 IKLWDGR-IGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKTKKIEQDL 540
IKLW+ + K+ H + V V +S +S ++VS D +KVWN+ K++ +
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH + V +PDG ASGGKD LW
Sbjct: 189 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 219
Score = 199 (75.1 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 73/309 (23%), Positives = 129/309 (41%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-----VRVLTSHTRSV 342
++GH W+T ++ P + S+ +D I +W + + R L H+ V
Sbjct: 11 LKGHNGWVTQIATTPQFPD----MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT-- 399
+ + G S S D T+++W + G R GH V ++A S+D V +
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 400 -------STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
+ G KY + S + ++ +VS D + +WN K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS-SNPIIVSCGWDKLVKVWNLANCKLK 185
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
+ GH +N V SPDG + AS D LWD GK + TL G + + +S
Sbjct: 186 TNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSP 243
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLP---------GHGDEVYAVDWAPDGEKVASGG 563
+ L + + S +K+W+++ K I +L + ++ W+ DG+ + +G
Sbjct: 244 NRYWLCAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 302
Query: 564 KDKVLRLWQ 572
D ++R+WQ
Sbjct: 303 TDNLVRVWQ 311
Score = 173 (66.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 71/276 (25%), Positives = 118/276 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH+ V V S +G+ SGS D T+R WD+TT GT +V T+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT--------GTTTRRFVGHTK--- 106
Query: 165 TLADVLPLD-TLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS- 221
DVL + + + ++V K ++ V + T H+E V V+FSPN +
Sbjct: 107 ---DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 163
Query: 222 -LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ S D V+ W++ GH ++ + SPD SG K+G WD +
Sbjct: 164 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 223
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK----DGAIRIWDVILSQCVRVLT 336
GK + + G I AL + P + C S K +G I I D + + + +
Sbjct: 224 GKHL-YTLDGG-DIINALCFSP-NRYWLCAATGPSIKIWDLEGKI-IVDELKQEVISTSS 279
Query: 337 -SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDG 370
+ T + W G +++ D ++VW+ + G
Sbjct: 280 KAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 57/239 (23%), Positives = 98/239 (41%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
T GH + V+SV FS + R + SGS D T++ W+ L C+ T V +
Sbjct: 98 TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-----LGVCKYT-----VQDESH 147
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT--SSMPGHAEAVISVKFSPNGR 220
++ ++ V + +V + K + +V + C ++ GH + +V SP+G
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDK--LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEG-----------HKHWVLCIAWSPDSKQLVSGCK 269
ASG D WD+ L+ +G +++W LC A P K + +
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW-LCAATGPSIK--IWDLE 262
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
+I D + I + T+L+W + Q FA D +R+W V +
Sbjct: 263 GKIIV--DELKQEVISTSSKAEPPQCTSLAWSA---DGQTL-FAGY-TDNLVRVWQVTI 314
Score = 40 (19.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 468 FSPDGRIIASASFDKSIKLWDGRIG 492
+S DG+ + + D +++W IG
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 233 (87.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 86/313 (27%), Positives = 138/313 (44%)
Query: 246 EGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGK-QIGQP---MRGHKQWITALSW 300
+GH WV IA +P ++ S ++ I W + + G P +RGH +++ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV-- 69
Query: 301 EPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQ 358
+ +FA SG DG +R+WD+ R HT+ V + + I S S+
Sbjct: 70 ----VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 359 DRTIKVWRASDGVMCRTL--EGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPE 412
D+TIK+W GV T+ E H+ WV+ + S + + S G K ++ AN +
Sbjct: 126 DKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVKVWNLANCK 183
Query: 413 ESSKH----ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
+ H P+G SG D LW+ E K L + G +IN + F
Sbjct: 184 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN-EGKHLYTLDGGD-IINALCF 241
Query: 469 SPDGRIIASASFDKSIKLWDGRIGKFI----------TTLRGHVQAVYMVAWSSDSRLLV 518
SP+ R A+ SIK+WD GK I T+ + +AWS+D + L
Sbjct: 242 SPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF 299
Query: 519 SGSADSTLKVWNM 531
+G D+ ++VW +
Sbjct: 300 AGYTDNLVRVWQV 312
Score = 212 (79.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 68/250 (27%), Positives = 116/250 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH+ V V S +G+ SGS D T+R WD+TT T + GH VL +A+S D+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 117
Query: 262 KQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
+Q+VSG ++ I W++ K Q H +W++ + + P N S G D
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSP---NSSNPIIVSCGWDKL 173
Query: 321 IRIWDVILSQCVRVLTSH---TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
+++W+ L+ C ++ T+H T + + G L S +D +W ++G TL
Sbjct: 174 VKVWN--LANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP---EESSKHALA-KYQAQCPEGEKL 432
+G +N L S + AT +D +E + ++ +A+ P+ L
Sbjct: 231 DG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 289
Query: 433 VSGSDDFTLF 442
+D TLF
Sbjct: 290 AWSADGQTLF 299
Score = 208 (78.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 67/211 (31%), Positives = 99/211 (46%)
Query: 375 TLEGHAHWVNTLALST---DYLMRVEATST---GGFKYDPAN---PEESSK-HA-LAKYQ 423
TL+GH WV +A + D ++ T D N P+ + + H+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
+G+ +SGS D TL LW+ + R GH + + V FS D R I S S DK+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTT-RRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 484 IKLWDGR-IGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKTKKIEQDL 540
IKLW+ + K+ H + V V +S +S ++VS D +KVWN+ K++ +
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH + V +PDG ASGGKD LW
Sbjct: 189 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 219
Score = 199 (75.1 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 73/309 (23%), Positives = 129/309 (41%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-----VRVLTSHTRSV 342
++GH W+T ++ P + S+ +D I +W + + R L H+ V
Sbjct: 11 LKGHNGWVTQIATTPQFPD----MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT-- 399
+ + G S S D T+++W + G R GH V ++A S+D V +
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 400 -------STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
+ G KY + S + ++ +VS D + +WN K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS-SNPIIVSCGWDKLVKVWNLANCKLK 185
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
+ GH +N V SPDG + AS D LWD GK + TL G + + +S
Sbjct: 186 TNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSP 243
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLP---------GHGDEVYAVDWAPDGEKVASGG 563
+ L + + S +K+W+++ K I +L + ++ W+ DG+ + +G
Sbjct: 244 NRYWLCAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 302
Query: 564 KDKVLRLWQ 572
D ++R+WQ
Sbjct: 303 TDNLVRVWQ 311
Score = 173 (66.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 71/276 (25%), Positives = 118/276 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH+ V V S +G+ SGS D T+R WD+TT GT +V T+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT--------GTTTRRFVGHTK--- 106
Query: 165 TLADVLPLD-TLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS- 221
DVL + + + ++V K ++ V + T H+E V V+FSPN +
Sbjct: 107 ---DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 163
Query: 222 -LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ S D V+ W++ GH ++ + SPD SG K+G WD +
Sbjct: 164 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 223
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK----DGAIRIWDVILSQCVRVLT 336
GK + + G I AL + P + C S K +G I I D + + + +
Sbjct: 224 GKHL-YTLDGG-DIINALCFSP-NRYWLCAATGPSIKIWDLEGKI-IVDELKQEVISTSS 279
Query: 337 -SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDG 370
+ T + W G +++ D ++VW+ + G
Sbjct: 280 KAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 57/239 (23%), Positives = 98/239 (41%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
T GH + V+SV FS + R + SGS D T++ W+ L C+ T V +
Sbjct: 98 TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-----LGVCKYT-----VQDESH 147
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT--SSMPGHAEAVISVKFSPNGR 220
++ ++ V + +V + K + +V + C ++ GH + +V SP+G
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDK--LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEG-----------HKHWVLCIAWSPDSKQLVSGCK 269
ASG D WD+ L+ +G +++W LC A P K + +
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW-LCAATGPSIK--IWDLE 262
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
+I D + I + T+L+W + Q FA D +R+W V +
Sbjct: 263 GKIIV--DELKQEVISTSSKAEPPQCTSLAWSA---DGQTL-FAGY-TDNLVRVWQVTI 314
Score = 40 (19.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 468 FSPDGRIIASASFDKSIKLWDGRIG 492
+S DG+ + + D +++W IG
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 233 (87.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 86/313 (27%), Positives = 138/313 (44%)
Query: 246 EGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGK-QIGQP---MRGHKQWITALSW 300
+GH WV IA +P ++ S ++ I W + + G P +RGH +++ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV-- 69
Query: 301 EPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQ 358
+ +FA SG DG +R+WD+ R HT+ V + + I S S+
Sbjct: 70 ----VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 359 DRTIKVWRASDGVMCRTL--EGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPE 412
D+TIK+W GV T+ E H+ WV+ + S + + S G K ++ AN +
Sbjct: 126 DKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVKVWNLANCK 183
Query: 413 ESSKH----ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
+ H P+G SG D LW+ E K L + G +IN + F
Sbjct: 184 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN-EGKHLYTLDGGD-IINALCF 241
Query: 469 SPDGRIIASASFDKSIKLWDGRIGKFI----------TTLRGHVQAVYMVAWSSDSRLLV 518
SP+ R A+ SIK+WD GK I T+ + +AWS+D + L
Sbjct: 242 SPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF 299
Query: 519 SGSADSTLKVWNM 531
+G D+ ++VW +
Sbjct: 300 AGYTDNLVRVWQV 312
Score = 212 (79.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 68/250 (27%), Positives = 116/250 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH+ V V S +G+ SGS D T+R WD+TT T + GH VL +A+S D+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 117
Query: 262 KQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
+Q+VSG ++ I W++ K Q H +W++ + + P N S G D
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSP---NSSNPIIVSCGWDKL 173
Query: 321 IRIWDVILSQCVRVLTSH---TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
+++W+ L+ C ++ T+H T + + G L S +D +W ++G TL
Sbjct: 174 VKVWN--LANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP---EESSKHALA-KYQAQCPEGEKL 432
+G +N L S + AT +D +E + ++ +A+ P+ L
Sbjct: 231 DG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 289
Query: 433 VSGSDDFTLF 442
+D TLF
Sbjct: 290 AWSADGQTLF 299
Score = 208 (78.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 67/211 (31%), Positives = 99/211 (46%)
Query: 375 TLEGHAHWVNTLALST---DYLMRVEATST---GGFKYDPAN---PEESSK-HA-LAKYQ 423
TL+GH WV +A + D ++ T D N P+ + + H+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
+G+ +SGS D TL LW+ + R GH + + V FS D R I S S DK+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTT-RRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 484 IKLWDGR-IGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKTKKIEQDL 540
IKLW+ + K+ H + V V +S +S ++VS D +KVWN+ K++ +
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH + V +PDG ASGGKD LW
Sbjct: 189 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 219
Score = 199 (75.1 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 73/309 (23%), Positives = 129/309 (41%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-----VRVLTSHTRSV 342
++GH W+T ++ P + S+ +D I +W + + R L H+ V
Sbjct: 11 LKGHNGWVTQIATTPQFPD----MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT-- 399
+ + G S S D T+++W + G R GH V ++A S+D V +
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 400 -------STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
+ G KY + S + ++ +VS D + +WN K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS-SNPIIVSCGWDKLVKVWNLANCKLK 185
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
+ GH +N V SPDG + AS D LWD GK + TL G + + +S
Sbjct: 186 TNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSP 243
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLP---------GHGDEVYAVDWAPDGEKVASGG 563
+ L + + S +K+W+++ K I +L + ++ W+ DG+ + +G
Sbjct: 244 NRYWLCAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 302
Query: 564 KDKVLRLWQ 572
D ++R+WQ
Sbjct: 303 TDNLVRVWQ 311
Score = 173 (66.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 71/276 (25%), Positives = 118/276 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH+ V V S +G+ SGS D T+R WD+TT GT +V T+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT--------GTTTRRFVGHTK--- 106
Query: 165 TLADVLPLD-TLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS- 221
DVL + + + ++V K ++ V + T H+E V V+FSPN +
Sbjct: 107 ---DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 163
Query: 222 -LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ S D V+ W++ GH ++ + SPD SG K+G WD +
Sbjct: 164 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 223
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK----DGAIRIWDVILSQCVRVLT 336
GK + + G I AL + P + C S K +G I I D + + + +
Sbjct: 224 GKHL-YTLDGG-DIINALCFSP-NRYWLCAATGPSIKIWDLEGKI-IVDELKQEVISTSS 279
Query: 337 -SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDG 370
+ T + W G +++ D ++VW+ + G
Sbjct: 280 KAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 57/239 (23%), Positives = 98/239 (41%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
T GH + V+SV FS + R + SGS D T++ W+ L C+ T V +
Sbjct: 98 TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-----LGVCKYT-----VQDESH 147
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT--SSMPGHAEAVISVKFSPNGR 220
++ ++ V + +V + K + +V + C ++ GH + +V SP+G
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDK--LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEG-----------HKHWVLCIAWSPDSKQLVSGCK 269
ASG D WD+ L+ +G +++W LC A P K + +
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW-LCAATGPSIK--IWDLE 262
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
+I D + I + T+L+W + Q FA D +R+W V +
Sbjct: 263 GKIIV--DELKQEVISTSSKAEPPQCTSLAWSA---DGQTL-FAGY-TDNLVRVWQVTI 314
Score = 40 (19.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 468 FSPDGRIIASASFDKSIKLWDGRIG 492
+S DG+ + + D +++W IG
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 233 (87.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 86/313 (27%), Positives = 138/313 (44%)
Query: 246 EGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGK-QIGQP---MRGHKQWITALSW 300
+GH WV IA +P ++ S ++ I W + + G P +RGH +++ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV-- 69
Query: 301 EPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQ 358
+ +FA SG DG +R+WD+ R HT+ V + + I S S+
Sbjct: 70 ----VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 359 DRTIKVWRASDGVMCRTL--EGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPE 412
D+TIK+W GV T+ E H+ WV+ + S + + S G K ++ AN +
Sbjct: 126 DKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVKVWNLANCK 183
Query: 413 ESSKH----ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
+ H P+G SG D LW+ E K L + G +IN + F
Sbjct: 184 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN-EGKHLYTLDGGD-IINALCF 241
Query: 469 SPDGRIIASASFDKSIKLWDGRIGKFI----------TTLRGHVQAVYMVAWSSDSRLLV 518
SP+ R A+ SIK+WD GK I T+ + +AWS+D + L
Sbjct: 242 SPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF 299
Query: 519 SGSADSTLKVWNM 531
+G D+ ++VW +
Sbjct: 300 AGYTDNLVRVWQV 312
Score = 212 (79.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 68/250 (27%), Positives = 116/250 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH+ V V S +G+ SGS D T+R WD+TT T + GH VL +A+S D+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 117
Query: 262 KQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
+Q+VSG ++ I W++ K Q H +W++ + + P N S G D
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSP---NSSNPIIVSCGWDKL 173
Query: 321 IRIWDVILSQCVRVLTSH---TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
+++W+ L+ C ++ T+H T + + G L S +D +W ++G TL
Sbjct: 174 VKVWN--LANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP---EESSKHALA-KYQAQCPEGEKL 432
+G +N L S + AT +D +E + ++ +A+ P+ L
Sbjct: 231 DG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 289
Query: 433 VSGSDDFTLF 442
+D TLF
Sbjct: 290 AWSADGQTLF 299
Score = 208 (78.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 67/211 (31%), Positives = 99/211 (46%)
Query: 375 TLEGHAHWVNTLALST---DYLMRVEATST---GGFKYDPAN---PEESSK-HA-LAKYQ 423
TL+GH WV +A + D ++ T D N P+ + + H+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
+G+ +SGS D TL LW+ + R GH + + V FS D R I S S DK+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTT-RRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 484 IKLWDGR-IGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKTKKIEQDL 540
IKLW+ + K+ H + V V +S +S ++VS D +KVWN+ K++ +
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH + V +PDG ASGGKD LW
Sbjct: 189 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 219
Score = 199 (75.1 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 73/309 (23%), Positives = 129/309 (41%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-----VRVLTSHTRSV 342
++GH W+T ++ P + S+ +D I +W + + R L H+ V
Sbjct: 11 LKGHNGWVTQIATTPQFPD----MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT-- 399
+ + G S S D T+++W + G R GH V ++A S+D V +
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 400 -------STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
+ G KY + S + ++ +VS D + +WN K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS-SNPIIVSCGWDKLVKVWNLANCKLK 185
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
+ GH +N V SPDG + AS D LWD GK + TL G + + +S
Sbjct: 186 TNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSP 243
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLP---------GHGDEVYAVDWAPDGEKVASGG 563
+ L + + S +K+W+++ K I +L + ++ W+ DG+ + +G
Sbjct: 244 NRYWLCAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 302
Query: 564 KDKVLRLWQ 572
D ++R+WQ
Sbjct: 303 TDNLVRVWQ 311
Score = 173 (66.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 71/276 (25%), Positives = 118/276 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH+ V V S +G+ SGS D T+R WD+TT GT +V T+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT--------GTTTRRFVGHTK--- 106
Query: 165 TLADVLPLD-TLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS- 221
DVL + + + ++V K ++ V + T H+E V V+FSPN +
Sbjct: 107 ---DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 163
Query: 222 -LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ S D V+ W++ GH ++ + SPD SG K+G WD +
Sbjct: 164 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 223
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK----DGAIRIWDVILSQCVRVLT 336
GK + + G I AL + P + C S K +G I I D + + + +
Sbjct: 224 GKHL-YTLDGG-DIINALCFSP-NRYWLCAATGPSIKIWDLEGKI-IVDELKQEVISTSS 279
Query: 337 -SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDG 370
+ T + W G +++ D ++VW+ + G
Sbjct: 280 KAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 57/239 (23%), Positives = 98/239 (41%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
T GH + V+SV FS + R + SGS D T++ W+ L C+ T V +
Sbjct: 98 TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-----LGVCKYT-----VQDESH 147
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT--SSMPGHAEAVISVKFSPNGR 220
++ ++ V + +V + K + +V + C ++ GH + +V SP+G
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDK--LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEG-----------HKHWVLCIAWSPDSKQLVSGCK 269
ASG D WD+ L+ +G +++W LC A P K + +
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW-LCAATGPSIK--IWDLE 262
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
+I D + I + T+L+W + Q FA D +R+W V +
Sbjct: 263 GKIIV--DELKQEVISTSSKAEPPQCTSLAWSA---DGQTL-FAGY-TDNLVRVWQVTI 314
Score = 40 (19.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 468 FSPDGRIIASASFDKSIKLWDGRIG 492
+S DG+ + + D +++W IG
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 233 (87.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 86/313 (27%), Positives = 138/313 (44%)
Query: 246 EGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGK-QIGQP---MRGHKQWITALSW 300
+GH WV IA +P ++ S ++ I W + + G P +RGH +++ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV-- 69
Query: 301 EPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQ 358
+ +FA SG DG +R+WD+ R HT+ V + + I S S+
Sbjct: 70 ----VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 359 DRTIKVWRASDGVMCRTL--EGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPE 412
D+TIK+W GV T+ E H+ WV+ + S + + S G K ++ AN +
Sbjct: 126 DKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVKVWNLANCK 183
Query: 413 ESSKH----ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
+ H P+G SG D LW+ E K L + G +IN + F
Sbjct: 184 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN-EGKHLYTLDGGD-IINALCF 241
Query: 469 SPDGRIIASASFDKSIKLWDGRIGKFI----------TTLRGHVQAVYMVAWSSDSRLLV 518
SP+ R A+ SIK+WD GK I T+ + +AWS+D + L
Sbjct: 242 SPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF 299
Query: 519 SGSADSTLKVWNM 531
+G D+ ++VW +
Sbjct: 300 AGYTDNLVRVWQV 312
Score = 212 (79.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 68/250 (27%), Positives = 116/250 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH+ V V S +G+ SGS D T+R WD+TT T + GH VL +A+S D+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 117
Query: 262 KQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
+Q+VSG ++ I W++ K Q H +W++ + + P N S G D
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSP---NSSNPIIVSCGWDKL 173
Query: 321 IRIWDVILSQCVRVLTSH---TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
+++W+ L+ C ++ T+H T + + G L S +D +W ++G TL
Sbjct: 174 VKVWN--LANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP---EESSKHALA-KYQAQCPEGEKL 432
+G +N L S + AT +D +E + ++ +A+ P+ L
Sbjct: 231 DG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 289
Query: 433 VSGSDDFTLF 442
+D TLF
Sbjct: 290 AWSADGQTLF 299
Score = 208 (78.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 67/211 (31%), Positives = 99/211 (46%)
Query: 375 TLEGHAHWVNTLALST---DYLMRVEATST---GGFKYDPAN---PEESSK-HA-LAKYQ 423
TL+GH WV +A + D ++ T D N P+ + + H+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
+G+ +SGS D TL LW+ + R GH + + V FS D R I S S DK+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTT-RRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 484 IKLWDGR-IGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKTKKIEQDL 540
IKLW+ + K+ H + V V +S +S ++VS D +KVWN+ K++ +
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH + V +PDG ASGGKD LW
Sbjct: 189 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 219
Score = 199 (75.1 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 73/309 (23%), Positives = 129/309 (41%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-----VRVLTSHTRSV 342
++GH W+T ++ P + S+ +D I +W + + R L H+ V
Sbjct: 11 LKGHNGWVTQIATTPQFPD----MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT-- 399
+ + G S S D T+++W + G R GH V ++A S+D V +
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 400 -------STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
+ G KY + S + ++ +VS D + +WN K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS-SNPIIVSCGWDKLVKVWNLANCKLK 185
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
+ GH +N V SPDG + AS D LWD GK + TL G + + +S
Sbjct: 186 TNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSP 243
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLP---------GHGDEVYAVDWAPDGEKVASGG 563
+ L + + S +K+W+++ K I +L + ++ W+ DG+ + +G
Sbjct: 244 NRYWLCAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 302
Query: 564 KDKVLRLWQ 572
D ++R+WQ
Sbjct: 303 TDNLVRVWQ 311
Score = 173 (66.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 71/276 (25%), Positives = 118/276 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH+ V V S +G+ SGS D T+R WD+TT GT +V T+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT--------GTTTRRFVGHTK--- 106
Query: 165 TLADVLPLD-TLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS- 221
DVL + + + ++V K ++ V + T H+E V V+FSPN +
Sbjct: 107 ---DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 163
Query: 222 -LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ S D V+ W++ GH ++ + SPD SG K+G WD +
Sbjct: 164 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 223
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK----DGAIRIWDVILSQCVRVLT 336
GK + + G I AL + P + C S K +G I I D + + + +
Sbjct: 224 GKHL-YTLDGG-DIINALCFSP-NRYWLCAATGPSIKIWDLEGKI-IVDELKQEVISTSS 279
Query: 337 -SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDG 370
+ T + W G +++ D ++VW+ + G
Sbjct: 280 KAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 57/239 (23%), Positives = 98/239 (41%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
T GH + V+SV FS + R + SGS D T++ W+ L C+ T V +
Sbjct: 98 TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-----LGVCKYT-----VQDESH 147
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT--SSMPGHAEAVISVKFSPNGR 220
++ ++ V + +V + K + +V + C ++ GH + +V SP+G
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDK--LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEG-----------HKHWVLCIAWSPDSKQLVSGCK 269
ASG D WD+ L+ +G +++W LC A P K + +
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW-LCAATGPSIK--IWDLE 262
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
+I D + I + T+L+W + Q FA D +R+W V +
Sbjct: 263 GKIIV--DELKQEVISTSSKAEPPQCTSLAWSA---DGQTL-FAGY-TDNLVRVWQVTI 314
Score = 40 (19.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 468 FSPDGRIIASASFDKSIKLWDGRIG 492
+S DG+ + + D +++W IG
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 233 (87.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 86/313 (27%), Positives = 138/313 (44%)
Query: 246 EGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGK-QIGQP---MRGHKQWITALSW 300
+GH WV IA +P ++ S ++ I W + + G P +RGH +++ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV-- 69
Query: 301 EPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQ 358
+ +FA SG DG +R+WD+ R HT+ V + + I S S+
Sbjct: 70 ----VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 359 DRTIKVWRASDGVMCRTL--EGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPE 412
D+TIK+W GV T+ E H+ WV+ + S + + S G K ++ AN +
Sbjct: 126 DKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVKVWNLANCK 183
Query: 413 ESSKH----ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
+ H P+G SG D LW+ E K L + G +IN + F
Sbjct: 184 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN-EGKHLYTLDGGD-IINALCF 241
Query: 469 SPDGRIIASASFDKSIKLWDGRIGKFI----------TTLRGHVQAVYMVAWSSDSRLLV 518
SP+ R A+ SIK+WD GK I T+ + +AWS+D + L
Sbjct: 242 SPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF 299
Query: 519 SGSADSTLKVWNM 531
+G D+ ++VW +
Sbjct: 300 AGYTDNLVRVWQV 312
Score = 212 (79.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 68/250 (27%), Positives = 116/250 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH+ V V S +G+ SGS D T+R WD+TT T + GH VL +A+S D+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 117
Query: 262 KQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
+Q+VSG ++ I W++ K Q H +W++ + + P N S G D
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSP---NSSNPIIVSCGWDKL 173
Query: 321 IRIWDVILSQCVRVLTSH---TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
+++W+ L+ C ++ T+H T + + G L S +D +W ++G TL
Sbjct: 174 VKVWN--LANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP---EESSKHALA-KYQAQCPEGEKL 432
+G +N L S + AT +D +E + ++ +A+ P+ L
Sbjct: 231 DG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 289
Query: 433 VSGSDDFTLF 442
+D TLF
Sbjct: 290 AWSADGQTLF 299
Score = 208 (78.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 67/211 (31%), Positives = 99/211 (46%)
Query: 375 TLEGHAHWVNTLALST---DYLMRVEATST---GGFKYDPAN---PEESSK-HA-LAKYQ 423
TL+GH WV +A + D ++ T D N P+ + + H+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
+G+ +SGS D TL LW+ + R GH + + V FS D R I S S DK+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTT-RRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 484 IKLWDGR-IGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKTKKIEQDL 540
IKLW+ + K+ H + V V +S +S ++VS D +KVWN+ K++ +
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH + V +PDG ASGGKD LW
Sbjct: 189 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 219
Score = 199 (75.1 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 73/309 (23%), Positives = 129/309 (41%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-----VRVLTSHTRSV 342
++GH W+T ++ P + S+ +D I +W + + R L H+ V
Sbjct: 11 LKGHNGWVTQIATTPQFPD----MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT-- 399
+ + G S S D T+++W + G R GH V ++A S+D V +
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 400 -------STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
+ G KY + S + ++ +VS D + +WN K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS-SNPIIVSCGWDKLVKVWNLANCKLK 185
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
+ GH +N V SPDG + AS D LWD GK + TL G + + +S
Sbjct: 186 TNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSP 243
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLP---------GHGDEVYAVDWAPDGEKVASGG 563
+ L + + S +K+W+++ K I +L + ++ W+ DG+ + +G
Sbjct: 244 NRYWLCAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 302
Query: 564 KDKVLRLWQ 572
D ++R+WQ
Sbjct: 303 TDNLVRVWQ 311
Score = 173 (66.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 71/276 (25%), Positives = 118/276 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH+ V V S +G+ SGS D T+R WD+TT GT +V T+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT--------GTTTRRFVGHTK--- 106
Query: 165 TLADVLPLD-TLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS- 221
DVL + + + ++V K ++ V + T H+E V V+FSPN +
Sbjct: 107 ---DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 163
Query: 222 -LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ S D V+ W++ GH ++ + SPD SG K+G WD +
Sbjct: 164 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 223
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK----DGAIRIWDVILSQCVRVLT 336
GK + + G I AL + P + C S K +G I I D + + + +
Sbjct: 224 GKHL-YTLDGG-DIINALCFSP-NRYWLCAATGPSIKIWDLEGKI-IVDELKQEVISTSS 279
Query: 337 -SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDG 370
+ T + W G +++ D ++VW+ + G
Sbjct: 280 KAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 57/239 (23%), Positives = 98/239 (41%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
T GH + V+SV FS + R + SGS D T++ W+ L C+ T V +
Sbjct: 98 TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-----LGVCKYT-----VQDESH 147
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT--SSMPGHAEAVISVKFSPNGR 220
++ ++ V + +V + K + +V + C ++ GH + +V SP+G
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDK--LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEG-----------HKHWVLCIAWSPDSKQLVSGCK 269
ASG D WD+ L+ +G +++W LC A P K + +
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW-LCAATGPSIK--IWDLE 262
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
+I D + I + T+L+W + Q FA D +R+W V +
Sbjct: 263 GKIIV--DELKQEVISTSSKAEPPQCTSLAWSA---DGQTL-FAGY-TDNLVRVWQVTI 314
Score = 40 (19.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 468 FSPDGRIIASASFDKSIKLWDGRIG 492
+S DG+ + + D +++W IG
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 233 (87.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 86/313 (27%), Positives = 138/313 (44%)
Query: 246 EGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGK-QIGQP---MRGHKQWITALSW 300
+GH WV IA +P ++ S ++ I W + + G P +RGH +++ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV-- 69
Query: 301 EPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQ 358
+ +FA SG DG +R+WD+ R HT+ V + + I S S+
Sbjct: 70 ----VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 359 DRTIKVWRASDGVMCRTL--EGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPE 412
D+TIK+W GV T+ E H+ WV+ + S + + S G K ++ AN +
Sbjct: 126 DKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVKVWNLANCK 183
Query: 413 ESSKH----ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
+ H P+G SG D LW+ E K L + G +IN + F
Sbjct: 184 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN-EGKHLYTLDGGD-IINALCF 241
Query: 469 SPDGRIIASASFDKSIKLWDGRIGKFI----------TTLRGHVQAVYMVAWSSDSRLLV 518
SP+ R A+ SIK+WD GK I T+ + +AWS+D + L
Sbjct: 242 SPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF 299
Query: 519 SGSADSTLKVWNM 531
+G D+ ++VW +
Sbjct: 300 AGYTDNLVRVWQV 312
Score = 212 (79.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 68/250 (27%), Positives = 116/250 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH+ V V S +G+ SGS D T+R WD+TT T + GH VL +A+S D+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 117
Query: 262 KQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
+Q+VSG ++ I W++ K Q H +W++ + + P N S G D
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSP---NSSNPIIVSCGWDKL 173
Query: 321 IRIWDVILSQCVRVLTSH---TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
+++W+ L+ C ++ T+H T + + G L S +D +W ++G TL
Sbjct: 174 VKVWN--LANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP---EESSKHALA-KYQAQCPEGEKL 432
+G +N L S + AT +D +E + ++ +A+ P+ L
Sbjct: 231 DG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 289
Query: 433 VSGSDDFTLF 442
+D TLF
Sbjct: 290 AWSADGQTLF 299
Score = 208 (78.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 67/211 (31%), Positives = 99/211 (46%)
Query: 375 TLEGHAHWVNTLALST---DYLMRVEATST---GGFKYDPAN---PEESSK-HA-LAKYQ 423
TL+GH WV +A + D ++ T D N P+ + + H+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
+G+ +SGS D TL LW+ + R GH + + V FS D R I S S DK+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTT-RRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 484 IKLWDGR-IGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKTKKIEQDL 540
IKLW+ + K+ H + V V +S +S ++VS D +KVWN+ K++ +
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH + V +PDG ASGGKD LW
Sbjct: 189 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 219
Score = 199 (75.1 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 73/309 (23%), Positives = 129/309 (41%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-----VRVLTSHTRSV 342
++GH W+T ++ P + S+ +D I +W + + R L H+ V
Sbjct: 11 LKGHNGWVTQIATTPQFPD----MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT-- 399
+ + G S S D T+++W + G R GH V ++A S+D V +
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 400 -------STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
+ G KY + S + ++ +VS D + +WN K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS-SNPIIVSCGWDKLVKVWNLANCKLK 185
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
+ GH +N V SPDG + AS D LWD GK + TL G + + +S
Sbjct: 186 TNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSP 243
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLP---------GHGDEVYAVDWAPDGEKVASGG 563
+ L + + S +K+W+++ K I +L + ++ W+ DG+ + +G
Sbjct: 244 NRYWLCAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 302
Query: 564 KDKVLRLWQ 572
D ++R+WQ
Sbjct: 303 TDNLVRVWQ 311
Score = 173 (66.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 71/276 (25%), Positives = 118/276 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH+ V V S +G+ SGS D T+R WD+TT GT +V T+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT--------GTTTRRFVGHTK--- 106
Query: 165 TLADVLPLD-TLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS- 221
DVL + + + ++V K ++ V + T H+E V V+FSPN +
Sbjct: 107 ---DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 163
Query: 222 -LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ S D V+ W++ GH ++ + SPD SG K+G WD +
Sbjct: 164 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 223
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK----DGAIRIWDVILSQCVRVLT 336
GK + + G I AL + P + C S K +G I I D + + + +
Sbjct: 224 GKHL-YTLDGG-DIINALCFSP-NRYWLCAATGPSIKIWDLEGKI-IVDELKQEVISTSS 279
Query: 337 -SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDG 370
+ T + W G +++ D ++VW+ + G
Sbjct: 280 KAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 57/239 (23%), Positives = 98/239 (41%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
T GH + V+SV FS + R + SGS D T++ W+ L C+ T V +
Sbjct: 98 TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-----LGVCKYT-----VQDESH 147
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT--SSMPGHAEAVISVKFSPNGR 220
++ ++ V + +V + K + +V + C ++ GH + +V SP+G
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDK--LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEG-----------HKHWVLCIAWSPDSKQLVSGCK 269
ASG D WD+ L+ +G +++W LC A P K + +
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW-LCAATGPSIK--IWDLE 262
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
+I D + I + T+L+W + Q FA D +R+W V +
Sbjct: 263 GKIIV--DELKQEVISTSSKAEPPQCTSLAWSA---DGQTL-FAGY-TDNLVRVWQVTI 314
Score = 40 (19.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 468 FSPDGRIIASASFDKSIKLWDGRIG 492
+S DG+ + + D +++W IG
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 233 (87.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 86/313 (27%), Positives = 138/313 (44%)
Query: 246 EGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGK-QIGQP---MRGHKQWITALSW 300
+GH WV IA +P ++ S ++ I W + + G P +RGH +++ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV-- 69
Query: 301 EPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQ 358
+ +FA SG DG +R+WD+ R HT+ V + + I S S+
Sbjct: 70 ----VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 359 DRTIKVWRASDGVMCRTL--EGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPE 412
D+TIK+W GV T+ E H+ WV+ + S + + S G K ++ AN +
Sbjct: 126 DKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVKVWNLANCK 183
Query: 413 ESSKH----ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
+ H P+G SG D LW+ E K L + G +IN + F
Sbjct: 184 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN-EGKHLYTLDGGD-IINALCF 241
Query: 469 SPDGRIIASASFDKSIKLWDGRIGKFI----------TTLRGHVQAVYMVAWSSDSRLLV 518
SP+ R A+ SIK+WD GK I T+ + +AWS+D + L
Sbjct: 242 SPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF 299
Query: 519 SGSADSTLKVWNM 531
+G D+ ++VW +
Sbjct: 300 AGYTDNLVRVWQV 312
Score = 212 (79.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 68/250 (27%), Positives = 116/250 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH+ V V S +G+ SGS D T+R WD+TT T + GH VL +A+S D+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 117
Query: 262 KQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
+Q+VSG ++ I W++ K Q H +W++ + + P N S G D
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSP---NSSNPIIVSCGWDKL 173
Query: 321 IRIWDVILSQCVRVLTSH---TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
+++W+ L+ C ++ T+H T + + G L S +D +W ++G TL
Sbjct: 174 VKVWN--LANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP---EESSKHALA-KYQAQCPEGEKL 432
+G +N L S + AT +D +E + ++ +A+ P+ L
Sbjct: 231 DG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 289
Query: 433 VSGSDDFTLF 442
+D TLF
Sbjct: 290 AWSADGQTLF 299
Score = 208 (78.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 67/211 (31%), Positives = 99/211 (46%)
Query: 375 TLEGHAHWVNTLALST---DYLMRVEATST---GGFKYDPAN---PEESSK-HA-LAKYQ 423
TL+GH WV +A + D ++ T D N P+ + + H+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
+G+ +SGS D TL LW+ + R GH + + V FS D R I S S DK+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTT-RRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 484 IKLWDGR-IGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKTKKIEQDL 540
IKLW+ + K+ H + V V +S +S ++VS D +KVWN+ K++ +
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 188
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH + V +PDG ASGGKD LW
Sbjct: 189 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 219
Score = 199 (75.1 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 73/309 (23%), Positives = 129/309 (41%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-----VRVLTSHTRSV 342
++GH W+T ++ P + S+ +D I +W + + R L H+ V
Sbjct: 11 LKGHNGWVTQIATTPQFPD----MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT-- 399
+ + G S S D T+++W + G R GH V ++A S+D V +
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 400 -------STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
+ G KY + S + ++ +VS D + +WN K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS-SNPIIVSCGWDKLVKVWNLANCKLK 185
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
+ GH +N V SPDG + AS D LWD GK + TL G + + +S
Sbjct: 186 TNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSP 243
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLP---------GHGDEVYAVDWAPDGEKVASGG 563
+ L + + S +K+W+++ K I +L + ++ W+ DG+ + +G
Sbjct: 244 NRYWLCAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 302
Query: 564 KDKVLRLWQ 572
D ++R+WQ
Sbjct: 303 TDNLVRVWQ 311
Score = 173 (66.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 71/276 (25%), Positives = 118/276 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH+ V V S +G+ SGS D T+R WD+TT GT +V T+
Sbjct: 58 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT--------GTTTRRFVGHTK--- 106
Query: 165 TLADVLPLD-TLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS- 221
DVL + + + ++V K ++ V + T H+E V V+FSPN +
Sbjct: 107 ---DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 163
Query: 222 -LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ S D V+ W++ GH ++ + SPD SG K+G WD +
Sbjct: 164 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 223
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK----DGAIRIWDVILSQCVRVLT 336
GK + + G I AL + P + C S K +G I I D + + + +
Sbjct: 224 GKHL-YTLDGG-DIINALCFSP-NRYWLCAATGPSIKIWDLEGKI-IVDELKQEVISTSS 279
Query: 337 -SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDG 370
+ T + W G +++ D ++VW+ + G
Sbjct: 280 KAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 57/239 (23%), Positives = 98/239 (41%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
T GH + V+SV FS + R + SGS D T++ W+ L C+ T V +
Sbjct: 98 TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-----LGVCKYT-----VQDESH 147
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT--SSMPGHAEAVISVKFSPNGR 220
++ ++ V + +V + K + +V + C ++ GH + +V SP+G
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDK--LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEG-----------HKHWVLCIAWSPDSKQLVSGCK 269
ASG D WD+ L+ +G +++W LC A P K + +
Sbjct: 206 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW-LCAATGPSIK--IWDLE 262
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
+I D + I + T+L+W + Q FA D +R+W V +
Sbjct: 263 GKIIV--DELKQEVISTSSKAEPPQCTSLAWSA---DGQTL-FAGY-TDNLVRVWQVTI 314
Score = 40 (19.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 468 FSPDGRIIASASFDKSIKLWDGRIG 492
+S DG+ + + D +++W IG
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 254 (94.5 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 64/233 (27%), Positives = 121/233 (51%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + + S +D +I+IWD +C++VLT HT SV C+++ +I + S D T++V
Sbjct: 246 LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD-ERVIVTGSSDSTVRV 304
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W + G + TL H V L S ++ + +D A+ + + + L ++
Sbjct: 305 WDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAV-WDMASATDITLRRVLVGHR 363
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + + +VS S D T+ +W+ + + + GH++ I C+++ R++ S S
Sbjct: 364 AAVNVVDFDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRD--RLVVSGS 420
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
D +I+LWD G + L GH + V + + D++ +VSG+ D +KVW+++
Sbjct: 421 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 471
Score = 241 (89.9 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 80/299 (26%), Positives = 139/299 (46%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D +++SG ++ I WD S+ + + + + GH + L ++ R
Sbjct: 243 VYCLQYDDD--KIISGLRDNSIKIWDKSSLECL-KVLTGHTGSVLCLQYDE-------RV 292
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW---RAS 368
+ D +R+WDV + + L H +V +R+ +GL+ + S+DR+I VW A+
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTCSKDRSIAVWDMASAT 351
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLM--------RVEATSTGGFKYDPANPEESSKHALA 420
D + R L GH VN + Y++ +V +TST F K +A
Sbjct: 352 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEF----VRTLNGHKRGIA 407
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
Q + +VSGS D T+ LW+ E L + GH++L+ C+ F D + I S ++
Sbjct: 408 CLQYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAY 461
Query: 481 DKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
D IK+WD + + TL H V+ + + D ++S S D T+ +W+
Sbjct: 462 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 518
Score = 232 (86.7 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 67/248 (27%), Positives = 125/248 (50%)
Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
Q ++ + +++ V C+++ +I S +D +IK+W S + L GH V L L
Sbjct: 231 QRIQCRSENSKGVYCLQYDDDKII-SGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQ 287
Query: 390 TDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
D + V +S + N E H A + G +V+ S D ++ +W+
Sbjct: 288 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-LMVTCSKDRSIAVWD 346
Query: 446 PEKEKK-SLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
+L R + GH+ +N V+F D + I SAS D++IK+W +F+ TL GH +
Sbjct: 347 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 404
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
+ + + RL+VSGS+D+T+++W+++ + L GH + V + + D +++ SG
Sbjct: 405 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 460
Query: 564 KDKVLRLW 571
D +++W
Sbjct: 461 YDGKIKVW 468
Score = 219 (82.2 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C + GH +V+ +++ R + +GS D+TVR WDV T L H VL + +S
Sbjct: 272 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 329
Query: 259 PDSKQLVSGCKNGVIHAWD--SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD S+T + + + GH+ + + ++ ++ ++SG
Sbjct: 330 --NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI------VSASG 381
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W + VR L H R + C+++ L+ S S D TI++W G R L
Sbjct: 382 -DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 439
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKY-------DPANPEESS------KHALAKYQ 423
EGH V + + V G K DP P + +H+ ++
Sbjct: 440 EGHEELVRCIRFDNKRI--VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 497
Query: 424 AQCPEGEKLVSGSDDFTLFLWN 445
Q E + ++S S D T+ +W+
Sbjct: 498 LQFDEFQ-IISSSHDDTILIWD 518
Score = 194 (73.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 72/282 (25%), Positives = 127/282 (45%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+ SG D +++ WD ++ L GH VLC+ + D + +V+G + + WD +TG
Sbjct: 253 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTG 310
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSH 338
+ + + H + + HL + KD +I +WD+ + + RVL H
Sbjct: 311 EVLNTLIH-HNEAV-------LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 362
Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
+V + + ++ SAS DRTIKVW S RTL GH + L D L+ V
Sbjct: 363 RAAVNVVDFDDKYIV-SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLV-VSG 419
Query: 399 TSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------PEK 448
+S + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 420 SSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRA 478
Query: 449 EKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+L T H + ++F + +II+S S D +I +WD
Sbjct: 479 PASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWD 518
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 50/182 (27%), Positives = 83/182 (45%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
C + GH +V+ +++ R + +GS D+TVR WDV T L T L + NE
Sbjct: 272 CLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVL----NT--LIHHNEAV 323
Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS--MPGHAEAVISVKFSPNG 219
+ ++ L + T + + + AV+ + T T + GH AV V F +
Sbjct: 324 LHLRFSNGLMV-TCSKDRSI-------AVWDMASATDITLRRVLVGHRAAVNVVDF--DD 373
Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
+ + S SGD T++ W +T + GHK + C+ + + +VSG + I WD
Sbjct: 374 KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 431
Query: 280 TG 281
G
Sbjct: 432 CG 433
Score = 144 (55.7 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ R + SGS D T+R WD+ L EGH+ V CI + D+
Sbjct: 398 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 453
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGA 320
K++VSG +G I WD P + + S F L + SS D
Sbjct: 454 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDT 513
Query: 321 IRIWDVI 327
I IWD +
Sbjct: 514 ILIWDFL 520
Score = 48 (22.0 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 17/75 (22%), Positives = 35/75 (46%)
Query: 125 LASGSGDTTVRFWDVTTQTPLFKCEGTP----YLFYVNETEITKTLADVLPLDTLNTEEV 180
+ SG D +++ WD ++ L G L Y +T + + + +NT EV
Sbjct: 253 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEV 312
Query: 181 VD-IVYQKQAVFQVR 194
++ +++ +AV +R
Sbjct: 313 LNTLIHHNEAVLHLR 327
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 249 (92.7 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 91/335 (27%), Positives = 154/335 (45%)
Query: 244 KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF 303
+C H W+ + + + +++G + W S GK I + GH + ++W
Sbjct: 96 QCLFHDDWISSVRGAEE--WILTGSYDKTSRIW-SLEGKSI-MTIVGHTDVVKDVAWVKK 151
Query: 304 HLNHQCRRFASSGKDGAIRIWDVILSQC-VRVL---TSHTRSVTCIRWGGSGLIY-SASQ 358
N C +SS D I +W+ + + V+ L H SV I +G + S S
Sbjct: 152 D-NLSCLLLSSS-MDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSW 209
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418
D+ +K+W A T E + L T+ + + T G P K A
Sbjct: 210 DKMLKIWSAVP-----TDEE-----DELEEPTNRPRKKQKTEQLGLTRTPIVTLSGHKEA 259
Query: 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
++ + E++ S S D T+ +W+ E + +TG++ + NC+ +SP + +AS
Sbjct: 260 ISS--VLWSDAEEICSASWDHTIRVWDVESGSLK-STLTGNK-VFNCISYSPLCKRLASG 315
Query: 479 SFDKSIKLWDGRI--GKFIT-TLRGHVQAVYMVAWS-SDSRLLVSGSADSTLKVWNMKTK 534
S D+ I+LWD R G ++ +L H V + WS + + L+SGS D+ +K+W+ ++
Sbjct: 316 STDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDNIVKLWDTRSC 375
Query: 535 KIE-QDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
K DL H D+V +VDW G + SGG D L
Sbjct: 376 KAPLYDLAAHEDKVLSVDWTDTG-LLLSGGADNKL 409
Score = 212 (79.7 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 56/194 (28%), Positives = 91/194 (46%)
Query: 178 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 237
EE + +KQ Q+ ++ GH EA+ SV +S + + S S D T+R WDV
Sbjct: 228 EEPTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIRVWDVE 286
Query: 238 TQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST--GKQIGQPMRGHKQWI 295
+ + G+K + CI++SP K+L SG + I WD T G + + H W+
Sbjct: 287 SGSLKSTLTGNKVFN-CISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWV 345
Query: 296 TALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-VRVLTSHTRSVTCIRWGGSGLIY 354
T+L W P H ++ S D +++WD + + L +H V + W +GL+
Sbjct: 346 TSLKWSPTHE----QQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLL 401
Query: 355 SASQDRTIKVWRAS 368
S D + +R S
Sbjct: 402 SGGADNKLYSYRYS 415
Score = 193 (73.0 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 102/428 (23%), Positives = 178/428 (41%)
Query: 12 RILTRFKSDDGE-VAGDL-LDLPLNVNTEHLSLIVNSLLQ-QDEGTPYL---FYVNETEI 65
++ TRF +D+ + V D+ +P LS I+N LL+ ++E ++ F + +
Sbjct: 3 QLQTRFFTDNKKYVVDDVPFSIPAASEIADLSNIINKLLEAKNEFHKHVEFDFLIKGQFL 62
Query: 66 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL 125
L + L+ +++EEVV++ Y ++ + +C H + + SV+ + +
Sbjct: 63 RLPLLKHMELENISSEEVVELEYVEK--YTAPQPEQCLF----HDDWISSVRGAEEW--I 114
Query: 126 ASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVY 185
+GS D T R W + ++ + G + V + K D L L++ I+
Sbjct: 115 LTGSYDKTSRIWSLEGKS-IMTIVG--HTDVVKDVAWVKK--DNLSCLLLSSSMDQTILL 169
Query: 186 QKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT-------- 237
+ V R + GHA +V S+ G SGS D ++ W
Sbjct: 170 WEWNV--ERNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSWDKMLKIWSAVPTDEEDEL 227
Query: 238 ------------------TQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
T+TP+ GHK + + WS D++++ S + I WD
Sbjct: 228 EEPTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIRVWDVE 286
Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV---LT 336
+G + + G+K + +S+ P C+R AS D IR+WD V LT
Sbjct: 287 SGS-LKSTLTGNKVF-NCISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLT 339
Query: 337 SHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLM 394
SHT VT ++W + + S S D +K+W D C+ + LA D ++
Sbjct: 340 SHTGWVTSLKWSPTHEQQLISGSLDNIVKLW---DTRSCKAP------LYDLAAHEDKVL 390
Query: 395 RVEATSTG 402
V+ T TG
Sbjct: 391 SVDWTDTG 398
Score = 185 (70.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 73/275 (26%), Positives = 132/275 (48%)
Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRW----GGSGLIYSASQDRTIKVWRAS-DGVM 372
D RIW + + + + HT V + W S L+ S+S D+TI +W + +
Sbjct: 120 DKTSRIWS-LEGKSIMTIVGHTDVVKDVAWVKKDNLSCLLLSSSMDQTILLWEWNVERNK 178
Query: 373 CRTLE---GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG 429
+ L GHA V+++A V++T T K+ + ++ + K + P
Sbjct: 179 VKALHCCRGHAGSVDSIA--------VDSTGT---KFCSGSWDK-----MLKIWSAVPTD 222
Query: 430 EKLVSGSDDFTLFLWNPEKEKKS----LAR-----MTGHQQLINCVEFSPDGRIIASASF 480
E+ D+ P K++K+ L R ++GH++ I+ V +S D I SAS+
Sbjct: 223 EE-----DELEEPTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASW 276
Query: 481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK---IE 537
D +I++WD G +TL G+ + +++S + L SGS D +++W+ +TK +
Sbjct: 277 DHTIRVWDVESGSLKSTLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVS 335
Query: 538 QDLPGHGDEVYAVDWAPDGEK-VASGGKDKVLRLW 571
L H V ++ W+P E+ + SG D +++LW
Sbjct: 336 LSLTSHTGWVTSLKWSPTHEQQLISGSLDNIVKLW 370
Score = 145 (56.1 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 53/208 (25%), Positives = 97/208 (46%)
Query: 81 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 140
EE + +KQ Q+ ++ GH EA+ SV +S + + S S D T+R WDV
Sbjct: 228 EEPTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIRVWDVE 286
Query: 141 TQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT 200
+ + G ++ + + K LA +T+ + + + + + +
Sbjct: 287 SGSLKSTLTGNKVFNCISYSPLCKRLASG------STDRHIRLWDPR-----TKDGSLVS 335
Query: 201 SSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWS 258
S+ H V S+K+SP + + L SGS D V+ WD + + PL+ H+ VL + W+
Sbjct: 336 LSLTSHTGWVTSLKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT 395
Query: 259 PDSKQLVSGCKNGVIHAWD-SSTGKQIG 285
D+ L+SG + ++++ S T +G
Sbjct: 396 -DTGLLLSGGADNKLYSYRYSPTTSHVG 422
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 37/104 (35%), Positives = 55/104 (52%)
Query: 475 IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW-SSD--SRLLVSGSADSTLKVW-- 529
I + S+DK+ ++W GK I T+ GH V VAW D S LL+S S D T+ +W
Sbjct: 114 ILTGSYDKTSRIWSLE-GKSIMTIVGHTDVVKDVAWVKKDNLSCLLLSSSMDQTILLWEW 172
Query: 530 NMKTKKIE--QDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
N++ K++ GH V ++ G K SG DK+L++W
Sbjct: 173 NVERNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSWDKMLKIW 216
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 215 (80.7 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 41/124 (33%), Positives = 70/124 (56%)
Query: 449 EKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG-KFITTLRGHVQAVYM 507
E + + + GH ++N F P GR I ++S DKS +LWD G K + GH V
Sbjct: 376 ETQPILSLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLDQEGHSDGVMG 435
Query: 508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV 567
++ SD LL +GS D +++W++++ + GH +V +VDW+P+G ++AS +D
Sbjct: 436 ISIQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWSPNGYQLASSSEDNT 495
Query: 568 LRLW 571
+ +W
Sbjct: 496 VVIW 499
Score = 199 (75.1 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 57/217 (26%), Positives = 98/217 (45%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP-LFKCEGHKHWVLCIAWSPD 260
S+ GH++ V F P GR + + S D + R WD+ + L EGH V+ I+ D
Sbjct: 382 SLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLDQEGHSDGVMGISIQSD 441
Query: 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
L +G ++G++ WD +G+ I +GH + + ++ W P +Q ASS +D
Sbjct: 442 GSLLATGSQDGLVRIWDLRSGRPILY-FQGHSKQVISVDWSPN--GYQ---LASSSEDNT 495
Query: 321 IRIWDVILSQCVRVLTSHTRSVTCIRW-------------GGSGLI-YSA--SQDRTIKV 364
+ IWD+ + + +H V+C+++ G + Y A S D IK
Sbjct: 496 VVIWDIRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSFDGKIKT 555
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATST 401
W + T EGH+ V ++ L+ ++ T
Sbjct: 556 WSPNTWSPLATFEGHSSKVTSIDLTNSKILSTSFDKT 592
Score = 188 (71.2 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 47/178 (26%), Positives = 81/178 (45%)
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW 257
+C GH++ V+ + +G LA+GS D VR WD+ + P+ +GH V+ + W
Sbjct: 421 KCLLDQEGHSDGVMGISIQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDW 480
Query: 258 SPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP--FHLNHQ------- 308
SP+ QL S ++ + WD +Q Q + H ++ + ++ N+
Sbjct: 481 SPNGYQLASSSEDNTVVIWDIRKKEQSCQIL-AHNSIVSCVKFQKQSTQTNNNNNNSSPG 539
Query: 309 CRRF-ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW 365
C + A+ DG I+ W + H+ VT I S ++ S S D+T K+W
Sbjct: 540 CVNYLATCSFDGKIKTWSPNTWSPLATFEGHSSKVTSIDLTNSKIL-STSFDKTWKIW 596
Score = 177 (67.4 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 53/232 (22%), Positives = 97/232 (41%)
Query: 319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEG 378
G ++W V Q ++L H++ V+CI + I + + S C+
Sbjct: 291 GVSKVWSVS-GQKKQILAGHSQRVSCIAYHPLSGIDGNHTKNLVNIATTSADSTCKLWPL 349
Query: 379 HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD 438
+ N + + + +T + P E + + P G + + S+D
Sbjct: 350 LNNDNNNNNNNNNDNEEEDNDATVSIETQPILSLEGHSDVVNRCSFH-PCGRYITTSSND 408
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL 498
+ LW+ E K L GH + + DG ++A+ S D +++WD R G+ I
Sbjct: 409 KSWRLWDLESGGKCLLDQEGHSDGVMGISIQSDGSLLATGSQDGLVRIWDLRSGRPILYF 468
Query: 499 RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
+GH + V V WS + L S S D+T+ +W+++ K+ + H V V
Sbjct: 469 QGHSKQVISVDWSPNGYQLASSSEDNTVVIWDIRKKEQSCQILAHNSIVSCV 520
Score = 133 (51.9 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 33/139 (23%), Positives = 61/139 (43%)
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
D TV + TQ P+ EGH V ++ P + + + + WD +G +
Sbjct: 370 DATV---SIETQ-PILSLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLD 425
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
GH + +S + A+ +DG +RIWD+ + + H++ V + W
Sbjct: 426 QEGHSDGVMGIS-----IQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDW 480
Query: 348 GGSGL-IYSASQDRTIKVW 365
+G + S+S+D T+ +W
Sbjct: 481 SPNGYQLASSSEDNTVVIW 499
Score = 127 (49.8 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 39/161 (24%), Positives = 69/161 (42%)
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
+G L +GS D + +W+ + + + GH + + V++SP+G +AS+S D ++ +W
Sbjct: 441 DGSLLATGSQDGLVRIWDL-RSGRPILYFQGHSKQVISVDWSPNGYQLASSSEDNTVVIW 499
Query: 488 DGRIGKFITTLRGHVQAVYMVAWSSDS---------------RLLVSGSADSTLKVWNMK 532
D R + + H V V + S L + S D +K W+
Sbjct: 500 DIRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSFDGKIKTWSPN 559
Query: 533 TKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
T GH +V ++D K+ S DK ++W N
Sbjct: 560 TWSPLATFEGHSSKVTSIDLT--NSKILSTSFDKTWKIWSN 598
Score = 125 (49.1 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 35/119 (29%), Positives = 60/119 (50%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF-------------SPDGR 473
P G +L S S+D T+ +W+ K+++S ++ H +++CV+F S G
Sbjct: 482 PNGYQLASSSEDNTVVIWDIRKKEQS-CQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGC 540
Query: 474 I--IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
+ +A+ SFD IK W + T GH V + ++ S++L S S D T K+W+
Sbjct: 541 VNYLATCSFDGKIKTWSPNTWSPLATFEGHSSKVTSIDLTN-SKIL-STSFDKTWKIWS 597
Score = 86 (35.3 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 25/89 (28%), Positives = 40/89 (44%)
Query: 173 DTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMP--GHAEAVISVKFSPNGRSLASGSGDTT 230
D LN + ++K + V+ + SS+ G + FSP+G+++A GS
Sbjct: 233 DDLNMMVKIKTEFEKDMEYTVKELKNYYSSVSQIGDDRPLSMGVFSPDGKNVAIGSWSGV 292
Query: 231 VRFWDVTTQTPLFKCEGHKHWVLCIAWSP 259
+ W V+ Q GH V CIA+ P
Sbjct: 293 SKVWSVSGQKKQILA-GHSQRVSCIAYHP 320
Score = 79 (32.9 bits), Expect = 9.9e-18, Sum P(2) = 9.9e-18
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 257 WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL---NHQCR--R 311
+SPD K + G +GV W S K+ Q + GH Q ++ +++ P NH
Sbjct: 277 FSPDGKNVAIGSWSGVSKVWSVSGQKK--QILAGHSQRVSCIAYHPLSGIDGNHTKNLVN 334
Query: 312 FASSGKDGAIRIWDVI 327
A++ D ++W ++
Sbjct: 335 IATTSADSTCKLWPLL 350
Score = 72 (30.4 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
S+ GH++ V F P GR + + S D + R WD+
Sbjct: 382 SLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDL 416
Score = 63 (27.2 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 76 DTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMP--GHAEAVISVKFSPNGRSLASGSGDTT 133
D LN + ++K + V+ + SS+ G + FSP+G+++A GS
Sbjct: 233 DDLNMMVKIKTEFEKDMEYTVKELKNYYSSVSQIGDDRPLSMGVFSPDGKNVAIGSWSGV 292
Query: 134 VRFWDVTTQ 142
+ W V+ Q
Sbjct: 293 SKVWSVSGQ 301
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 254 (94.5 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 74/256 (28%), Positives = 115/256 (44%)
Query: 327 ILSQCVRVL-TSHTR---SVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAH 381
I S C R + TS + + C+ W G + + S +W L+ H
Sbjct: 109 ITSVCSRFIHTSSNKVKYPINCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDS 168
Query: 382 WVNTLALSTDYLMRVEATSTGGFKY-DPA--NPEESSKHALAKYQAQC--PEGEKLVSGS 436
V ++ S + V +G KY P N + H +K + P KL S +
Sbjct: 169 AVRSIIWSHNEDWMVSGDDSGNIKYWQPNMNNVKIFKAHEQSKIRGLSFSPTDLKLASCA 228
Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496
DD + +W+ + + ++ GH + CV + P +I S D +IK+WD + + IT
Sbjct: 229 DDKIIKIWDFARCTED-NQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNIT 287
Query: 497 TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDG 556
TL GH V V W+ + +VS S+D LKV++++T K Q GHG EV A+ P
Sbjct: 288 TLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYH 347
Query: 557 EKV-ASGGKDKVLRLW 571
E + SG KD + W
Sbjct: 348 EDLFVSGDKDGKILYW 363
Score = 228 (85.3 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 68/286 (23%), Positives = 125/286 (43%)
Query: 295 ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLI 353
I +SW P + RR + G +W+ + +L +H +V I W +
Sbjct: 128 INCVSWTP-----EGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWM 182
Query: 354 YSASQDRTIKVWRASDGVMCRTLEGHAHW-VNTLALSTDYLMRVEATSTGGFK-YDPANP 411
S IK W+ + + + + H + L+ S L K +D A
Sbjct: 183 VSGDDSGNIKYWQPNMNNV-KIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARC 241
Query: 412 EESSKHALAKYQAQC----PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE 467
E ++ + +C P+ +VSG D + +W+ K +++ + GH+ ++ VE
Sbjct: 242 TEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDA-KSSQNITTLHGHKSTVSKVE 300
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS-DSRLLVSGSADSTL 526
++ +G I SAS D+ +K++D R K + T +GH + V +A L VSG D +
Sbjct: 301 WNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKI 360
Query: 527 KVWNMKTKKIEQDL-PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
W + + + ++ H +V+++ W P G +ASG D + W
Sbjct: 361 LYWIVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGSNDHTTKFW 406
Score = 216 (81.1 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 82/288 (28%), Positives = 118/288 (40%)
Query: 213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV 272
V ++P GR L +GS W+ T + H V I WS + +VSG +G
Sbjct: 131 VSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGDDSGN 190
Query: 273 IHAWDSSTGKQIGQPMRGHKQW-ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC 331
I W + + + H+Q I LS+ P L + AS D I+IWD ++C
Sbjct: 191 IKYWQPNMNNV--KIFKAHEQSKIRGLSFSPTDL-----KLASCADDKIIKIWD--FARC 241
Query: 332 VR--VLTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
L H V C+ W LI S +D IK+W A TL GH V+ +
Sbjct: 242 TEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEW 301
Query: 389 STDYLMRVEATSTGGFK-YDPANPEESSK---HAL-AKYQAQCPEGEKL-VSGSDDFTLF 442
+ + V A+S K +D +E H A P E L VSG D +
Sbjct: 302 NQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKIL 361
Query: 443 LW---NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
W NPE + + + H + + + P G I+AS S D + K W
Sbjct: 362 YWIVGNPEPQAEI---HSAHDADVWSLSWHPIGHILASGSNDHTTKFW 406
Score = 207 (77.9 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 66/264 (25%), Positives = 111/264 (42%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
+ H AV S+ +S N + SG +++W K +F +E +
Sbjct: 163 LQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYWQPNMNN--VK------IFKAHEQSKIRG 214
Query: 166 LADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT--SSMPGHAEAVISVKFSPNGRSLA 223
L+ P D L D + ++ RCT + + GH V V + P +
Sbjct: 215 LS-FSPTD-LKLASCAD-----DKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIV 267
Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
SG D ++ WD + + GHK V + W+ + +VS + ++ +D T K+
Sbjct: 268 SGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKE 327
Query: 284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-VRVLTSHTRSV 342
+ Q +GH + +TAL+ P+H + F S KDG I W V + + ++H V
Sbjct: 328 M-QTFKGHGKEVTALALHPYHED----LFVSGDKDGKILYWIVGNPEPQAEIHSAHDADV 382
Query: 343 TCIRWGGSG-LIYSASQDRTIKVW 365
+ W G ++ S S D T K W
Sbjct: 383 WSLSWHPIGHILASGSNDHTTKFW 406
Score = 163 (62.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 70/324 (21%), Positives = 133/324 (41%)
Query: 249 KHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQ 308
K+ + C++W+P+ ++LV+G +G W+ T ++ H + ++ W H N
Sbjct: 125 KYPINCVSWTPEGRRLVTGSSSGEFTLWNGLTFN-FETILQAHDSAVRSIIWS--H-NED 180
Query: 309 CRRFASSGKD-GAIRIWDVILSQCVRVLTSHTRS-VTCIRWGGSGL-IYSASQDRTIKVW 365
+ SG D G I+ W ++ V++ +H +S + + + + L + S + D+ IK+W
Sbjct: 181 ---WMVSGDDSGNIKYWQPNMNN-VKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIW 236
Query: 366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESS-----KHAL 419
+ L GH V ++ + V K +D + + + K +
Sbjct: 237 DFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTV 296
Query: 420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASA 478
+K + G +VS S D L +++ + K + GH + + + P + S
Sbjct: 297 SKVEWN-QNGNWIVSASSDQLLKVFDI-RTMKEMQTFKGHGKEVTALALHPYHEDLFVSG 354
Query: 479 SFDKSIKLWD-GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK----T 533
D I W G H V+ ++W +L SGS D T K W+ T
Sbjct: 355 DKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGSNDHTTKFWSRNRPADT 414
Query: 534 KKIEQDLPGHGDEVYAVDWAPDGE 557
K + + P ++ + A D E
Sbjct: 415 MKDKYNNPNASKDIENEEDADDQE 438
Score = 46 (21.3 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 116 VKFSPNGRSLASGSGDTTVRFWDVTT 141
V ++P GR L +GS W+ T
Sbjct: 131 VSWTPEGRRLVTGSSSGEFTLWNGLT 156
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 253 (94.1 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 83/287 (28%), Positives = 134/287 (46%)
Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLN 306
GH V+C+ + L SG + I W+ +T +Q+ + GH +T L ++
Sbjct: 271 GHSDGVMCLQLVRNI--LASGSYDATIRLWNLATFQQVAL-LEGHSSGVTCLQFD----- 322
Query: 307 HQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWR 366
QC+ + S D IRIW+ S+C+ +L HT SV C+ + S L+ S S D T+K+W
Sbjct: 323 -QCKLISGS-MDKTIRIWNYRTSECISILHGHTDSVLCLTFD-STLLVSGSADCTVKLWH 379
Query: 367 ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEES----SKHALAKY 422
S G TL GH VN++ + D + + + K S H +
Sbjct: 380 FSGGKRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAH-IGPV 437
Query: 423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK 482
Q+ +L S S D T+ W+ EK KK + + GH + + E + D + S + D
Sbjct: 438 QSLALADSRLFSCSLDGTIKQWDIEK-KKCVHTLFGHIEGV--WEIAADHLRLISGAHDG 494
Query: 483 SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
+K+W+ + + TL+ H + V VA D + VSGS D + +W
Sbjct: 495 VVKVWEAC--ECVHTLKNHSEPVTSVALG-DCEV-VSGSEDGKIYLW 537
Score = 218 (81.8 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 71/241 (29%), Positives = 110/241 (45%)
Query: 334 VLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYL 393
VL+ H+ V C++ + ++ S S D TI++W + LEGH+ V L L
Sbjct: 268 VLSGHSDGVMCLQLVRN-ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKL 326
Query: 394 MRVEATSTGGFKYDPANPEESSKHALAKYQAQCP--EGEKLVSGSDDFTLFLWNPEKEKK 451
+ T + S H C + LVSGS D T+ LW+ K+
Sbjct: 327 ISGSMDKTIRIWNYRTSECISILHGHTD-SVLCLTFDSTLLVSGSADCTVKLWHFSGGKR 385
Query: 452 SLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS 511
R GH +N V D ++ S S D +IK+W + T H+ V +A +
Sbjct: 386 ITLR--GHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALA 443
Query: 512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
DSRL S S D T+K W+++ KK L GH + V+ + A D ++ SG D V+++W
Sbjct: 444 -DSRLF-SCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEI--AADHLRLISGAHDGVVKVW 499
Query: 572 Q 572
+
Sbjct: 500 E 500
Score = 202 (76.2 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 75/296 (25%), Positives = 126/296 (42%)
Query: 198 RCTSS-MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIA 256
RC + GH++ V+ ++ N LASGS D T+R W++ T + EGH V C+
Sbjct: 263 RCRQVVLSGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQ 320
Query: 257 WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ D +L+SG + I W+ T + I + GH + L+++ L S
Sbjct: 321 F--DQCKLISGSMDKTIRIWNYRTSECISI-LHGHTDSVLCLTFDSTLL-------VSGS 370
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRW-GGSGLIYSASQDRTIKVWRASDGVMCRT 375
D +++W + + L HT V +R GL+ S S D TIK+W T
Sbjct: 371 ADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHT 429
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ----CPEGEK 431
H V +LAL+ L T ++D ++ H L + + +
Sbjct: 430 FSAHIGPVQSLALADSRLFSCSLDGTIK-QWDIE--KKKCVHTLFGHIEGVWEIAADHLR 486
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
L+SG+ D + +W + + + + H + + V D ++ S S D I LW
Sbjct: 487 LISGAHDGVVKVW---EACECVHTLKNHSEPVTSVALG-DCEVV-SGSEDGKIYLW 537
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 243 (90.6 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 76/279 (27%), Positives = 125/279 (44%)
Query: 313 ASSGKDGAIRIWDVILSQCVR--VLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASD 369
AS D +I +W C +L+ H ++ ++W S +I+SAS D + W +
Sbjct: 76 ASGSMDRSILLWRAN-GDCENYGILSGHRGAILDLQWSRDSDIIFSASADMHLASWDLTT 134
Query: 370 GVMCRTLEGHAHWVNTLALST---DYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC 426
G R GH +N+L +S + L T G +DP KHA ++
Sbjct: 135 GERIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIGI-WDPRK-----KHAADYIESDF 188
Query: 427 P--------EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
P G ++ SG D + +W+ K K + M GH+ I ++ SPD + + S
Sbjct: 189 PVTAVAISEAGNEIYSGGIDNDIKVWDVRK-KAVVYNMAGHRDTITTLKVSPDSQSLLSY 247
Query: 479 SFDKSIKLWDGR----IGKFITTLRGHVQAVY--MV--AWSSDSRLLVSGSADSTLKVWN 530
+ D + + WD R + I T G + +V W + + + G+AD T+ +W+
Sbjct: 248 AMDSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVRGGWDKEGKRVAMGAADGTVVIWS 307
Query: 531 MKTKKIEQDLPGHGDEVYAVDWAPDGEK-VASGGKDKVL 568
+T K+ LPGH V V+++P E + SG DK L
Sbjct: 308 NETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSDKTL 346
Score = 209 (78.6 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 71/255 (27%), Positives = 115/255 (45%)
Query: 335 LTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRAS-DGVMCRTLEGHAHWVNTLALSTDY 392
L+ H+ + C ++ +G I S S DR+I +WRA+ D L GH + L S D
Sbjct: 56 LSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRANGDCENYGILSGHRGAILDLQWSRDS 115
Query: 393 LMRVEATSTGGF-KYDPANPEESSKHA----LAKYQAQCPEGEKLV-SGSDDFTLFLWNP 446
+ A++ +D E ++ + GE+++ SGSDD T+ +W+P
Sbjct: 116 DIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIGIWDP 175
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
K K A + V S G I S D IK+WD R + + GH +
Sbjct: 176 RK--KHAADYIESDFPVTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDTIT 233
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMK----TKKIEQDLPGH--GDEVYAV--DWAPDGEK 558
+ S DS+ L+S + DST + W+++ T++ + G G E V W +G++
Sbjct: 234 TLKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVRGGWDKEGKR 293
Query: 559 VASGGKDKVLRLWQN 573
VA G D + +W N
Sbjct: 294 VAMGAADGTVVIWSN 308
Score = 184 (69.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 67/270 (24%), Positives = 116/270 (42%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
+ GH A++ +++S + + S S D + WD+TT + + G + +N +I+K
Sbjct: 99 LSGHRGAILDLQWSRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEV--INSLDISKR 156
Query: 166 LADVLPLDTLN-TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
++L + + T + D +K A + S P V +V S G + S
Sbjct: 157 GEEILFSGSDDGTIGIWD-PRKKHAADYIE------SDFP-----VTAVAISEAGNEIYS 204
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD----SST 280
G D ++ WDV + ++ GH+ + + SPDS+ L+S + WD + T
Sbjct: 205 GGIDNDIKVWDVRKKAVVYNMAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDIRPFAPT 264
Query: 281 GKQI----GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT 336
+ I G PM K + W+ + +R A DG + IW + L
Sbjct: 265 ERHIRTFDGAPMGIEKNLVRG-GWDK-----EGKRVAMGAADGTVVIWSNETGKLTYKLP 318
Query: 337 SHTRSVTCIRW--GGSGLIYSASQDRTIKV 364
H +V C+ + G LI S S D+T+ V
Sbjct: 319 GHKAAVNCVEFSPGTEPLILSGSSDKTLLV 348
Score = 173 (66.0 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 41/122 (33%), Positives = 66/122 (54%)
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW--DGRIGKFITTLRGHVQAVYMVAW 510
L ++GH I C +F+ G+ IAS S D+SI LW +G + L GH A+ + W
Sbjct: 53 LMELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRANGDCENY-GILSGHRGAILDLQW 111
Query: 511 SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVA-SGGKDKVLR 569
S DS ++ S SAD L W++ T + + GH + + ++D + GE++ SG D +
Sbjct: 112 SRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIG 171
Query: 570 LW 571
+W
Sbjct: 172 IW 173
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 78/358 (21%), Positives = 139/358 (38%)
Query: 198 RCTSSMPGHAEAVISVKF-SPNGRSLASGSGDTTVRFWD--VTTQTPLFKCEGHKHWVLC 254
R S PG ++ V S RS G ++ + Q PL + GH + C
Sbjct: 6 RPASDDPGSSQLVKRQNVGSSTARSGGYGESSALIQAAPRLSSLQAPLMELSGHSGEIFC 65
Query: 255 IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
++ + + SG + I W ++ + + GH+ I L W + S
Sbjct: 66 AKFNSAGQYIASGSMDRSILLWRANGDCENYGILSGHRGAILDLQW-----SRDSDIIFS 120
Query: 315 SGKDGAIRIWDVILSQCVRVLTSHTRSVTC--IRWGGSGLIYSASQDRTIKVWRASDGVM 372
+ D + WD+ + +R H + I G +++S S D TI +W
Sbjct: 121 ASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIGIWDPRKKHA 180
Query: 373 CRTLEGHAHWVNTLALST----------DYLMRVEATSTGGFKYDPANPEESSKHALAKY 422
+E V +A+S D ++V Y+ A ++ +
Sbjct: 181 ADYIESDFP-VTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDT----ITTL 235
Query: 423 QAQCPEGEKLVSGSDDFTLFLWN--P-EKEKKSLARMTGHQQLI--NCVE--FSPDGRII 475
+ P+ + L+S + D T W+ P ++ + G I N V + +G+ +
Sbjct: 236 KVS-PDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVRGGWDKEGKRV 294
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR-LLVSGSADSTLKVWNMK 532
A + D ++ +W GK L GH AV V +S + L++SGS+D TL V ++
Sbjct: 295 AMGAADGTVVIWSNETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSDKTLLVGELR 352
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 68/294 (23%), Positives = 106/294 (36%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
+ GH+ + KF+ G+ +ASGS D ++ W CE N ++
Sbjct: 56 LSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRANGD-----CE--------NYGILSGH 102
Query: 166 LADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSM----PGHAEAVISVKFSPNGRS 221
+L L DI++ A + T GH E + S+ S G
Sbjct: 103 RGAILDLQWSRDS---DIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEE 159
Query: 222 -LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
L SGS D T+ WD + E V +A S ++ SG + I WD
Sbjct: 160 ILFSGSDDGTIGIWDPRKKHAADYIESDFP-VTAVAISEAGNEIYSGGIDNDIKVWDVRK 218
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR 340
K + M GH+ IT L P + S+ + IR + + +R
Sbjct: 219 -KAVVYNMAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDIRPF-APTERHIRTFDGAPM 276
Query: 341 SV--TCIR--WGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
+ +R W G + + D T+ +W G + L GH VN + S
Sbjct: 277 GIEKNLVRGGWDKEGKRVAMGAADGTVVIWSNETGKLTYKLPGHKAAVNCVEFS 330
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 253 (94.1 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 75/315 (23%), Positives = 147/315 (46%)
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITAL-SWEPFHLNHQCRRFASSGKDGA 320
K +V+ N IH +D++ Q + + GH + A+ W+ S G D
Sbjct: 264 KYIVASLDNAKIHVYDTNGENQ--KTLEGHVMGVWAMVPWDNI--------LVSGGCDRE 313
Query: 321 IRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRT-LEGH 379
+R+W++ + + +L HT +V C++ S S+D T+++W G CR+ L GH
Sbjct: 314 VRVWNMATGESIYLLRGHTSTVRCLKMSDKNTAISGSRDTTLRIWDLRTGT-CRSVLVGH 372
Query: 380 AHWVNTLALSTDYLMRVEATSTGG-FKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD 438
V LA+ D ++ +T + + ++ A +G ++ +GS D
Sbjct: 373 QASVRCLAVHGDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFDGRRIATGSLD 432
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD-GRIGKFITT 497
++ +W+P + A + GH L+ ++ S D ++ S D S+++W R+ I
Sbjct: 433 TSVRIWDPNTGQCH-AILQGHTSLVGQLQMSGD-TLVTGGS-DGSVRVWSLTRMAP-IHR 488
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGE 557
L H +V + + D+ +VSG +D +KVW ++T ++ ++L D V+ V + +
Sbjct: 489 LAAHDNSVTSLQF--DNNRIVSGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKA 546
Query: 558 KVASGGKDK-VLRLW 571
+ S + V+ +W
Sbjct: 547 VIMSSRSGRTVMEVW 561
Score = 201 (75.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 60/201 (29%), Positives = 92/201 (45%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH V +K S ++ SGS DTT+R WD+ T T GH+ V C+A D +
Sbjct: 330 GHTSTVRCLKMSDKNTAI-SGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVHGDI--V 386
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
VSG + W S G+ + + + GH I A++++ RR A+ D ++RIW
Sbjct: 387 VSGSYDTTARVWSISEGRFL-RALSGHFSQIYAIAFDG-------RRIATGSLDTSVRIW 438
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
D QC +L HT V ++ G L+ S D +++VW + L H + V
Sbjct: 439 DPNTGQCHAILQGHTSLVGQLQMSGDTLVTGGS-DGSVRVWSLTRMAPIHRLAAHDNSVT 497
Query: 385 TLALSTDYLMRVEATSTGGFK 405
+L + + V S G K
Sbjct: 498 SLQFDNNRI--VSGGSDGRVK 516
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 257 (95.5 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 75/264 (28%), Positives = 124/264 (46%)
Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
D +++W + + + L HT V + G I S S DRT+KVW DG + TL
Sbjct: 275 DNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTL 334
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH--ALAKYQA--QCPE--GE 430
+GH V +A++ L+ +T +D ES +H L + A +C + G
Sbjct: 335 QGHTSTVRCMAMAGSILVTGSRDTTLRV-WDV----ESGRHLATLHGHHAAVRCVQFDGT 389
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
+VSG DFT+ +WN + + +TGH + + F + I+ S S D SI++WD
Sbjct: 390 TVVSGGYDFTVKIWNAHTGR-CIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFT 448
Query: 491 I--GK-FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
G+ + L+GH + + +LVS +ADS ++VW++ L GH +
Sbjct: 449 RPEGQECVALLQGHTSLTSGMQLRGN--ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAI 506
Query: 548 YAVDWAPDGEKVASGGKDKVLRLW 571
++ W VA+ D ++LW
Sbjct: 507 TSLQWF-GRNMVATSSDDGTVKLW 529
Score = 249 (92.7 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 74/249 (29%), Positives = 121/249 (48%)
Query: 334 VLTSHTRSV-TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAH--WVNTLALST 390
VL H V TC++ L+ + S D T+KVW G + TL GH W + ++
Sbjct: 250 VLRGHEDHVITCMQIHDDVLV-TGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCG 308
Query: 391 DYLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE--GEKLVSGSDDFTLFLWNP 446
Y++ + ST + + S H L + + +C G LV+GS D TL +W+
Sbjct: 309 RYIV---SGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDV 365
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
E + LA + GH + CV+F DG + S +D ++K+W+ G+ I TL GH VY
Sbjct: 366 ESGRH-LATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVY 422
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD----LPGHGDEVYAVDWAPDGEKVASG 562
+ + S+ ++ SGS D++++VW+ T+ Q+ L GH + G + S
Sbjct: 423 SLLFESERSIVCSGSLDTSIRVWDF-TRPEGQECVALLQGHTSLTSGMQLR--GNILVSC 479
Query: 563 GKDKVLRLW 571
D +R+W
Sbjct: 480 NADSHVRVW 488
Score = 233 (87.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 76/309 (24%), Positives = 143/309 (46%)
Query: 247 GHK-HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQ--WITALSWEPF 303
GH+ H + C+ D LV+G + + W G ++ + GH W + +S
Sbjct: 253 GHEDHVITCMQIHDDV--LVTGSDDNTLKVWCIDKG-EVMYTLVGHTGGVWTSQIS---- 305
Query: 304 HLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTI 362
QC R+ SG D +++W + + L HT +V C+ GS L+ + S+D T+
Sbjct: 306 ----QCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILV-TGSRDTTL 360
Query: 363 KVWRASDGVMCRTLEGH------AHWVNTLALST--DYLMRVEATSTGGFKYDPANPEES 414
+VW G TL GH + T +S D+ +++ TG +
Sbjct: 361 RVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRC-IRTLTGHNN 419
Query: 415 SKHALAKYQAQCPEGEKLVSGSDDFTLFLWN---PEKEKKSLARMTGHQQLINCVEFSPD 471
++L +++ E + SGS D ++ +W+ PE ++ +A + GH L + ++
Sbjct: 420 RVYSLL-FES---ERSIVCSGSLDTSIRVWDFTRPEGQE-CVALLQGHTSLTSGMQLR-- 472
Query: 472 GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
G I+ S + D +++WD G + L GH A+ + W + ++ + S D T+K+W++
Sbjct: 473 GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN-MVATSSDDGTVKLWDI 531
Query: 532 KTKKIEQDL 540
+ + +DL
Sbjct: 532 ERGALIRDL 540
Score = 229 (85.7 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 73/301 (24%), Positives = 135/301 (44%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH + VI+ + L +GS D T++ W + ++ GH V S + +
Sbjct: 253 GHEDHVITC-MQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYI 311
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
VSG + + W + G + ++GH + ++ L + +D +R+W
Sbjct: 312 VSGSTDRTVKVWSTVDGSLL-HTLQGHTSTVRCMAMAGSIL-------VTGSRDTTLRVW 363
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
DV + + L H +V C+++ G+ ++ S D T+K+W A G RTL GH + V
Sbjct: 364 DVESGRHLATLHGHHAAVRCVQFDGTTVV-SGGYDFTVKIWNAHTGRCIRTLTGHNNRVY 422
Query: 385 TLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQAQCPEGEKL-----VSGSDD 438
+L ++ + + + +D PE AL + G +L VS + D
Sbjct: 423 SLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNAD 482
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRIGKFITT 497
+ +W+ E + ++GH+ I +++ GR ++A++S D ++KLWD G I
Sbjct: 483 SHVRVWDIH-EGTCVHMLSGHRSAITSLQWF--GRNMVATSSDDGTVKLWDIERGALIRD 539
Query: 498 L 498
L
Sbjct: 540 L 540
Score = 214 (80.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 66/256 (25%), Positives = 118/256 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH V + + S GR + SGS D TV+ W + L +GH V C+A +
Sbjct: 291 TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--G 348
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
LV+G ++ + WD +G+ + + GH + + ++ + S G D +
Sbjct: 349 SILVTGSRDTTLRVWDVESGRHLAT-LHGHHAAVRCVQFDGTTV-------VSGGYDFTV 400
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRAS--DGVMC-RTLE 377
+IW+ +C+R LT H V + + ++ S S D +I+VW + +G C L+
Sbjct: 401 KIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ 460
Query: 378 GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE----GEKLV 433
GH + + L + L+ A S +D E + H L+ +++ G +V
Sbjct: 461 GHTSLTSGMQLRGNILVSCNADSHVRV-WDIH--EGTCVHMLSGHRSAITSLQWFGRNMV 517
Query: 434 S-GSDDFTLFLWNPEK 448
+ SDD T+ LW+ E+
Sbjct: 518 ATSSDDGTVKLWDIER 533
Score = 198 (74.8 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 49/181 (27%), Positives = 88/181 (48%)
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW 257
R +++ GH AV V+F +G ++ SG D TV+ W+ T + GH + V + +
Sbjct: 369 RHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLF 426
Query: 258 SPDSKQLVSGCKNGVIHAWDSST--GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS 315
+ + SG + I WD + G++ ++GH T+L+ L S
Sbjct: 427 ESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGH----TSLT-SGMQLRGNI--LVSC 479
Query: 316 GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRT 375
D +R+WD+ CV +L+ H ++T ++W G ++ ++S D T+K+W G + R
Sbjct: 480 NADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRD 539
Query: 376 L 376
L
Sbjct: 540 L 540
Score = 142 (55.0 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 42/143 (29%), Positives = 63/143 (44%)
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT---QTPLFKCEGHKHWVLC 254
RC ++ GH V S+ F + SGS DT++R WD T Q + +GH L
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS--LT 466
Query: 255 IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
LVS + + WD G + + GH+ IT+L W F N A+
Sbjct: 467 SGMQLRGNILVSCNADSHVRVWDIHEGTCVHM-LSGHRSAITSLQW--FGRN----MVAT 519
Query: 315 SGKDGAIRIWDVILSQCVRVLTS 337
S DG +++WD+ +R L +
Sbjct: 520 SSDDGTVKLWDIERGALIRDLVT 542
Score = 67 (28.6 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG 150
++ GH V + + S GR + SGS D TV+ W + L +G
Sbjct: 291 TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQG 336
Score = 39 (18.8 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 22/72 (30%), Positives = 32/72 (44%)
Query: 6 DKITTKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLI---VNSLLQQDEGTPYLFYVNE 62
DK+++ R L + K D A + LN EHL + ++S Q D T L N
Sbjct: 49 DKLSSSRPL-QHKLDLS--ASPSRNNDLNPRVEHLIALFKDLSSAEQMDAFTRLLQESNM 105
Query: 63 TEITKTLADVLP 74
T I + A + P
Sbjct: 106 TNIRQLRAIIEP 117
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 257 (95.5 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 75/264 (28%), Positives = 124/264 (46%)
Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
D +++W + + + L HT V + G I S S DRT+KVW DG + TL
Sbjct: 275 DNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTL 334
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH--ALAKYQA--QCPE--GE 430
+GH V +A++ L+ +T +D ES +H L + A +C + G
Sbjct: 335 QGHTSTVRCMAMAGSILVTGSRDTTLRV-WDV----ESGRHLATLHGHHAAVRCVQFDGT 389
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
+VSG DFT+ +WN + + +TGH + + F + I+ S S D SI++WD
Sbjct: 390 TVVSGGYDFTVKIWNAHTGR-CIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFT 448
Query: 491 I--GK-FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
G+ + L+GH + + +LVS +ADS ++VW++ L GH +
Sbjct: 449 RPEGQECVALLQGHTSLTSGMQLRGN--ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAI 506
Query: 548 YAVDWAPDGEKVASGGKDKVLRLW 571
++ W VA+ D ++LW
Sbjct: 507 TSLQWF-GRNMVATSSDDGTVKLW 529
Score = 249 (92.7 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 74/249 (29%), Positives = 121/249 (48%)
Query: 334 VLTSHTRSV-TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAH--WVNTLALST 390
VL H V TC++ L+ + S D T+KVW G + TL GH W + ++
Sbjct: 250 VLRGHEDHVITCMQIHDDVLV-TGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCG 308
Query: 391 DYLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QCPE--GEKLVSGSDDFTLFLWNP 446
Y++ + ST + + S H L + + +C G LV+GS D TL +W+
Sbjct: 309 RYIV---SGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDV 365
Query: 447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
E + LA + GH + CV+F DG + S +D ++K+W+ G+ I TL GH VY
Sbjct: 366 ESGRH-LATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVY 422
Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD----LPGHGDEVYAVDWAPDGEKVASG 562
+ + S+ ++ SGS D++++VW+ T+ Q+ L GH + G + S
Sbjct: 423 SLLFESERSIVCSGSLDTSIRVWDF-TRPEGQECVALLQGHTSLTSGMQLR--GNILVSC 479
Query: 563 GKDKVLRLW 571
D +R+W
Sbjct: 480 NADSHVRVW 488
Score = 233 (87.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 76/309 (24%), Positives = 143/309 (46%)
Query: 247 GHK-HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQ--WITALSWEPF 303
GH+ H + C+ D LV+G + + W G ++ + GH W + +S
Sbjct: 253 GHEDHVITCMQIHDDV--LVTGSDDNTLKVWCIDKG-EVMYTLVGHTGGVWTSQIS---- 305
Query: 304 HLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTI 362
QC R+ SG D +++W + + L HT +V C+ GS L+ + S+D T+
Sbjct: 306 ----QCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILV-TGSRDTTL 360
Query: 363 KVWRASDGVMCRTLEGH------AHWVNTLALST--DYLMRVEATSTGGFKYDPANPEES 414
+VW G TL GH + T +S D+ +++ TG +
Sbjct: 361 RVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRC-IRTLTGHNN 419
Query: 415 SKHALAKYQAQCPEGEKLVSGSDDFTLFLWN---PEKEKKSLARMTGHQQLINCVEFSPD 471
++L +++ E + SGS D ++ +W+ PE ++ +A + GH L + ++
Sbjct: 420 RVYSLL-FES---ERSIVCSGSLDTSIRVWDFTRPEGQE-CVALLQGHTSLTSGMQLR-- 472
Query: 472 GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
G I+ S + D +++WD G + L GH A+ + W + ++ + S D T+K+W++
Sbjct: 473 GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN-MVATSSDDGTVKLWDI 531
Query: 532 KTKKIEQDL 540
+ + +DL
Sbjct: 532 ERGALIRDL 540
Score = 229 (85.7 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 73/301 (24%), Positives = 135/301 (44%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH + VI+ + L +GS D T++ W + ++ GH V S + +
Sbjct: 253 GHEDHVITC-MQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYI 311
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
VSG + + W + G + ++GH + ++ L + +D +R+W
Sbjct: 312 VSGSTDRTVKVWSTVDGSLL-HTLQGHTSTVRCMAMAGSIL-------VTGSRDTTLRVW 363
Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
DV + + L H +V C+++ G+ ++ S D T+K+W A G RTL GH + V
Sbjct: 364 DVESGRHLATLHGHHAAVRCVQFDGTTVV-SGGYDFTVKIWNAHTGRCIRTLTGHNNRVY 422
Query: 385 TLALSTDYLMRVEATSTGGFK-YDPANPEESSKHALAKYQAQCPEGEKL-----VSGSDD 438
+L ++ + + + +D PE AL + G +L VS + D
Sbjct: 423 SLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNAD 482
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRIGKFITT 497
+ +W+ E + ++GH+ I +++ GR ++A++S D ++KLWD G I
Sbjct: 483 SHVRVWDIH-EGTCVHMLSGHRSAITSLQWF--GRNMVATSSDDGTVKLWDIERGALIRD 539
Query: 498 L 498
L
Sbjct: 540 L 540
Score = 214 (80.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 66/256 (25%), Positives = 118/256 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH V + + S GR + SGS D TV+ W + L +GH V C+A +
Sbjct: 291 TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--G 348
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
LV+G ++ + WD +G+ + + GH + + ++ + S G D +
Sbjct: 349 SILVTGSRDTTLRVWDVESGRHLAT-LHGHHAAVRCVQFDGTTV-------VSGGYDFTV 400
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRAS--DGVMC-RTLE 377
+IW+ +C+R LT H V + + ++ S S D +I+VW + +G C L+
Sbjct: 401 KIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ 460
Query: 378 GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE----GEKLV 433
GH + + L + L+ A S +D E + H L+ +++ G +V
Sbjct: 461 GHTSLTSGMQLRGNILVSCNADSHVRV-WDIH--EGTCVHMLSGHRSAITSLQWFGRNMV 517
Query: 434 S-GSDDFTLFLWNPEK 448
+ SDD T+ LW+ E+
Sbjct: 518 ATSSDDGTVKLWDIER 533
Score = 198 (74.8 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 49/181 (27%), Positives = 88/181 (48%)
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW 257
R +++ GH AV V+F +G ++ SG D TV+ W+ T + GH + V + +
Sbjct: 369 RHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLF 426
Query: 258 SPDSKQLVSGCKNGVIHAWDSST--GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS 315
+ + SG + I WD + G++ ++GH T+L+ L S
Sbjct: 427 ESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGH----TSLT-SGMQLRGNI--LVSC 479
Query: 316 GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRT 375
D +R+WD+ CV +L+ H ++T ++W G ++ ++S D T+K+W G + R
Sbjct: 480 NADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRD 539
Query: 376 L 376
L
Sbjct: 540 L 540
Score = 142 (55.0 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 42/143 (29%), Positives = 63/143 (44%)
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT---QTPLFKCEGHKHWVLC 254
RC ++ GH V S+ F + SGS DT++R WD T Q + +GH L
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS--LT 466
Query: 255 IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
LVS + + WD G + + GH+ IT+L W F N A+
Sbjct: 467 SGMQLRGNILVSCNADSHVRVWDIHEGTCVHM-LSGHRSAITSLQW--FGRN----MVAT 519
Query: 315 SGKDGAIRIWDVILSQCVRVLTS 337
S DG +++WD+ +R L +
Sbjct: 520 SSDDGTVKLWDIERGALIRDLVT 542
Score = 67 (28.6 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG 150
++ GH V + + S GR + SGS D TV+ W + L +G
Sbjct: 291 TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQG 336
Score = 39 (18.8 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 22/72 (30%), Positives = 32/72 (44%)
Query: 6 DKITTKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLI---VNSLLQQDEGTPYLFYVNE 62
DK+++ R L + K D A + LN EHL + ++S Q D T L N
Sbjct: 49 DKLSSSRPL-QHKLDLS--ASPSRNNDLNPRVEHLIALFKDLSSAEQMDAFTRLLQESNM 105
Query: 63 TEITKTLADVLP 74
T I + A + P
Sbjct: 106 TNIRQLRAIIEP 117
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 254 (94.5 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 77/269 (28%), Positives = 126/269 (46%)
Query: 264 LVSGCKNGVIHAWD-SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
L +GC + I +D S + Q ++GH+ + ++ + +L F+ S D +I+
Sbjct: 473 LFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQYL------FSGSS-DHSIK 525
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCR-TLEGHAH 381
+WD+ +C+ L H + V + L +S S D+TIKVW + C+ TLE HA
Sbjct: 526 VWDLKKLRCIFTLEGHDKPVHTVLLNDKYL-FSGSSDKTIKVWDLKT-LECKYTLESHAR 583
Query: 382 WVNTLALSTDYLMRVEATST-GGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT 440
V TL +S YL T + + K C G L SGS D T
Sbjct: 584 AVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKT 643
Query: 441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG 500
+ +WN K + A + GH + + + +++ +AS D +IK+WD + TTL G
Sbjct: 644 IRVWNL-KSLECSATLRGHDRWVEHMVICD--KLLFTASDDNTIKIWDLETLRCNTTLEG 700
Query: 501 HVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
H V +A D + ++S S D +++VW
Sbjct: 701 HNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 251 (93.4 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 81/271 (29%), Positives = 132/271 (48%)
Query: 309 CRRFASSG-KDGAIRIWDVILS--QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW 365
C +G D +IR++D +CV+ L H V I + L +S S D +IKVW
Sbjct: 469 CDNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQYL-FSGSSDHSIKVW 527
Query: 366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE---ESSKHALAK 421
TLEGH V+T+ L+ YL + T K +D E HA A
Sbjct: 528 DLKKLRCIFTLEGHDKPVHTVLLNDKYLFSGSSDKT--IKVWDLKTLECKYTLESHARA- 584
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
+ C G+ L SGS+D T+ +W+ + + + + GH + + + G + S S+D
Sbjct: 585 VKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYT-LKGHTKWVTTICIL--GTNLYSGSYD 641
Query: 482 KSIKLWDGRIGKFITTLRGHVQAV-YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL 540
K+I++W+ + + TLRGH + V +MV +LL + S D+T+K+W+++T + L
Sbjct: 642 KTIRVWNLKSLECSATLRGHDRWVEHMVICD---KLLFTASDDNTIKIWDLETLRCNTTL 698
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH V + D + V S D+ +R+W
Sbjct: 699 EGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 210 (79.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 60/203 (29%), Positives = 90/203 (44%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C ++ GH V S+ + N + L SGS D +++ WD+ +F EGH V + +
Sbjct: 494 CVQTLKGHEGPVESICY--NDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLN 551
Query: 259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD 318
K L SG + I WD T + + H + + L +L F+ S D
Sbjct: 552 --DKYLFSGSSDKTIKVWDLKT-LECKYTLESHARAVKTLCISGQYL------FSGSN-D 601
Query: 319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEG 378
I++WD+ +C L HT+ VT I G+ L YS S D+TI+VW TL G
Sbjct: 602 KTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNL-YSGSYDKTIRVWNLKSLECSATLRG 660
Query: 379 HAHWVNTLALSTDYLMRVEATST 401
H WV + + L +T
Sbjct: 661 HDRWVEHMVICDKLLFTASDDNT 683
Score = 195 (73.7 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 49/170 (28%), Positives = 81/170 (47%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV--LCIA 256
C ++ HA AV ++ S G+ L SGS D T++ WD+ T + +GH WV +CI
Sbjct: 574 CKYTLESHARAVKTLCIS--GQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICIL 631
Query: 257 WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ L SG + I W+ + + +RGH +W+ H+ + ++
Sbjct: 632 GT----NLYSGSYDKTIRVWNLKS-LECSATLRGHDRWVE-------HMVICDKLLFTAS 679
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIR-WGGSGLIYSASQDRTIKVW 365
D I+IWD+ +C L H +V C+ W + S S D++I+VW
Sbjct: 680 DDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 75 (31.5 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
RC ++ GH + V +V N + L SGS D T++ WD+ T
Sbjct: 533 RCIFTLEGHDKPVHTVLL--NDKYLFSGSSDKTIKVWDLKT 571
Score = 74 (31.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG 150
C ++ GH V S+ + N + L SGS D +++ WD+ +F EG
Sbjct: 494 CVQTLKGHEGPVESICY--NDQYLFSGSSDHSIKVWDLKKLRCIFTLEG 540
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 237 (88.5 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 76/235 (32%), Positives = 118/235 (50%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R + GH + + S+ F P+G L SGSGD +VR WD+ T +C T + E
Sbjct: 288 RIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTS----QCSLTLSI----ED 339
Query: 161 EITKTLADVLPLDTLNTEEVVDI---VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
+T T+A V P L +D V+ F V + + GH ++V SV FS
Sbjct: 340 GVT-TVA-VSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSN 397
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFK-CE----GHKHWVLCIAWSPDSKQLVSGCKN-G 271
NG +ASGS D TV+ W + ++ CE GHK +VL + +PD++ ++SG K+ G
Sbjct: 398 NGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRG 457
Query: 272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR--FASSGKDGAIRIW 324
VI WD ++G + ++GH+ + +++ LN + FA+ D RIW
Sbjct: 458 VIF-WDQASGNPLLM-LQGHRNSVISVA---VSLNSKGTEGIFATGSGDCKARIW 507
Score = 235 (87.8 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 52/152 (34%), Positives = 89/152 (58%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+G+ L +G++D + +W+ K+ + + GH+Q I ++F PDG + S S D+S+++
Sbjct: 265 PDGKLLATGAEDKLIRIWDLST-KRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRI 323
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP----- 541
WD R + TL V VA S D +L+ +GS D T++VW+ T + + L
Sbjct: 324 WDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNEN 382
Query: 542 --GHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH D VY+V ++ +GE++ASG D+ ++LW
Sbjct: 383 GNGHEDSVYSVAFSNNGEQIASGSLDRTVKLW 414
Score = 233 (87.1 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 53/157 (33%), Positives = 86/157 (54%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+G++LVSGS D ++ +W+ + SL + + V SPDG++IA+ S D+++++
Sbjct: 307 PDGDRLVSGSGDRSVRIWDLRTSQCSLTLSI--EDGVTTVAVSPDGKLIAAGSLDRTVRV 364
Query: 487 WDGRIGKFITTL-------RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK---- 535
WD G + L GH +VY VA+S++ + SGS D T+K+W+++ K
Sbjct: 365 WDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKS 424
Query: 536 -IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
E GH D V +V PD E + SG KD+ + W
Sbjct: 425 TCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFW 461
Score = 232 (86.7 bits), Expect = 5.6e-18, Sum P(2) = 5.6e-18
Identities = 75/247 (30%), Positives = 122/247 (49%)
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW--RASD 369
A+ +D IRIWD+ + +++L H + + + + G + S S DR++++W R S
Sbjct: 271 ATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQ 330
Query: 370 GVMCRTLEGHAHWVNTLALSTDYLM----RVEAT-----STGGF---KYDPANPEESSKH 417
+ ++E V T+A+S D + ++ T ST GF + D N E + H
Sbjct: 331 CSLTLSIEDG---VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGN-ENGNGH 386
Query: 418 ALAKYQ-AQCPEGEKLVSGSDDFTLFLWNPE--KEKKSLARMT--GHQQLINCVEFSPDG 472
+ Y A GE++ SGS D T+ LW+ E +KKS +T GH+ + V +PD
Sbjct: 387 EDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDN 446
Query: 473 RIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR----LLVSGSADSTLKV 528
I S S D+ + WD G + L+GH +V VA S +S+ + +GS D ++
Sbjct: 447 EYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARI 506
Query: 529 WNMKTKK 535
W TKK
Sbjct: 507 WKW-TKK 512
Score = 217 (81.4 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 91/319 (28%), Positives = 145/319 (45%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EGHKH------------W 251
H+ V V+FS +G+ +A+G TT F +VTT + K E +
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCNKTTQVF-NVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
+ + +SPD K L +G ++ +I WD ST K+I + +RGH+Q I +L + P R
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLST-KRIIKILRGHEQDIYSLDFFP-----DGDR 311
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDG 370
S D ++RIWD+ SQC L+ VT + G LI + S DRT++VW ++ G
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIED-GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTG 370
Query: 371 VMCRTLE-------GHAHWVNTLALSTD-------YLMR-VEATSTGGFKYDPANPEESS 415
+ L+ GH V ++A S + L R V+ G K D + E +
Sbjct: 371 FLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEG-KSDKKSTCEVT 429
Query: 416 K--HALAKYQAQC-PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG 472
H C P+ E ++SGS D + W+ + L + GH+ + V S +
Sbjct: 430 YIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWD-QASGNPLLMLQGHRNSVISVAVSLNS 488
Query: 473 R----IIASASFDKSIKLW 487
+ I A+ S D ++W
Sbjct: 489 KGTEGIFATGSGDCKARIW 507
Score = 208 (78.3 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 41/111 (36%), Positives = 68/111 (61%)
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
I V FSPDG+++A+ + DK I++WD + I LRGH Q +Y + + D LVSGS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 523 DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
D ++++W+++T + L D V V +PDG+ +A+G D+ +R+W +
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAAGSLDRTVRVWDS 367
Score = 181 (68.8 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 66/269 (24%), Positives = 124/269 (46%)
Query: 115 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDT 174
SV FSP+G+ LA+G+ D +R WD++T+ + G +E +I D P
Sbjct: 260 SVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRG-------HEQDIYSL--DFFP--- 307
Query: 175 LNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRF 233
+ + +V + ++ +R ++C+ ++ + V +V SP+G+ +A+GS D TVR
Sbjct: 308 -DGDRLVSGSGDRSVRIWDLR-TSQCSLTL-SIEDGVTTVAVSPDGKLIAAGSLDRTVRV 364
Query: 234 WDVTTQTPLFKCE-------GHKHWVLCIAWSPDSKQLVSGCKNGVIHAW--DSSTGKQI 284
WD TT + + + GH+ V +A+S + +Q+ SG + + W + + K+
Sbjct: 365 WDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKS 424
Query: 285 GQPMR--GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV 342
+ GHK ++ ++ P + S KD + WD + +L H SV
Sbjct: 425 TCEVTYIGHKDFVLSVCCTPDN-----EYILSGSKDRGVIFWDQASGNPLLMLQGHRNSV 479
Query: 343 TCIRW-----GGSGLIYSASQDRTIKVWR 366
+ G G+ + S D ++W+
Sbjct: 480 ISVAVSLNSKGTEGIFATGSGDCKARIWK 508
Score = 178 (67.7 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 59/207 (28%), Positives = 96/207 (46%)
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV-TTQTPLFKCEGHKHWVLCIA 256
R + GH + + S+ F P+G L SGSGD +VR WD+ T+Q L + V +A
Sbjct: 288 RIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTL--SIEDGVTTVA 345
Query: 257 WSPDSKQLVSGCKNGVIHAWDSSTGKQI------GQPMRGHKQWITALSWEPFHLNHQCR 310
SPD K + +G + + WDS+TG + + GH+ + +++ F N +
Sbjct: 346 VSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVA---FSNNGE-- 400
Query: 311 RFASSGKDGAIRIWDVI-----LSQCVRVLTSH---TRSVTCIRWGGSGLIYSASQDRTI 362
+ AS D +++W + S C H SV C + I S S+DR +
Sbjct: 401 QIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTP--DNEYILSGSKDRGV 458
Query: 363 KVWRASDGVMCRTLEGHAHWVNTLALS 389
W + G L+GH + V ++A+S
Sbjct: 459 IFWDQASGNPLLMLQGHRNSVISVAVS 485
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 40/135 (29%), Positives = 61/135 (45%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-CEGTPYLFYVNETEITKTL 166
GH ++V SV FS NG +ASGS D TV+ W + ++ CE T Y+ + ++
Sbjct: 385 GHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVT----YIGHKDFVLSV 440
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----L 222
T + E ++ + +F + + GH +VISV S N +
Sbjct: 441 CC-----TPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIF 495
Query: 223 ASGSGDTTVRFWDVT 237
A+GSGD R W T
Sbjct: 496 ATGSGDCKARIWKWT 510
Score = 60 (26.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
H+ V V+FS +G+ +A+G TT F +VTT
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCNKTTQVF-NVTT 230
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 237 (88.5 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 76/235 (32%), Positives = 118/235 (50%)
Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
R + GH + + S+ F P+G L SGSGD +VR WD+ T +C T + E
Sbjct: 288 RIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTS----QCSLTLSI----ED 339
Query: 161 EITKTLADVLPLDTLNTEEVVDI---VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
+T T+A V P L +D V+ F V + + GH ++V SV FS
Sbjct: 340 GVT-TVA-VSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSN 397
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFK-CE----GHKHWVLCIAWSPDSKQLVSGCKN-G 271
NG +ASGS D TV+ W + ++ CE GHK +VL + +PD++ ++SG K+ G
Sbjct: 398 NGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRG 457
Query: 272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR--FASSGKDGAIRIW 324
VI WD ++G + ++GH+ + +++ LN + FA+ D RIW
Sbjct: 458 VIF-WDQASGNPLLM-LQGHRNSVISVA---VSLNSKGTEGIFATGSGDCKARIW 507
Score = 235 (87.8 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 52/152 (34%), Positives = 89/152 (58%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+G+ L +G++D + +W+ K+ + + GH+Q I ++F PDG + S S D+S+++
Sbjct: 265 PDGKLLATGAEDKLIRIWDLST-KRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRI 323
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP----- 541
WD R + TL V VA S D +L+ +GS D T++VW+ T + + L
Sbjct: 324 WDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNEN 382
Query: 542 --GHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH D VY+V ++ +GE++ASG D+ ++LW
Sbjct: 383 GNGHEDSVYSVAFSNNGEQIASGSLDRTVKLW 414
Score = 233 (87.1 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 53/157 (33%), Positives = 86/157 (54%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+G++LVSGS D ++ +W+ + SL + + V SPDG++IA+ S D+++++
Sbjct: 307 PDGDRLVSGSGDRSVRIWDLRTSQCSLTLSI--EDGVTTVAVSPDGKLIAAGSLDRTVRV 364
Query: 487 WDGRIGKFITTL-------RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK---- 535
WD G + L GH +VY VA+S++ + SGS D T+K+W+++ K
Sbjct: 365 WDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKS 424
Query: 536 -IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
E GH D V +V PD E + SG KD+ + W
Sbjct: 425 TCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFW 461
Score = 232 (86.7 bits), Expect = 5.6e-18, Sum P(2) = 5.6e-18
Identities = 75/247 (30%), Positives = 122/247 (49%)
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW--RASD 369
A+ +D IRIWD+ + +++L H + + + + G + S S DR++++W R S
Sbjct: 271 ATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQ 330
Query: 370 GVMCRTLEGHAHWVNTLALSTDYLM----RVEAT-----STGGF---KYDPANPEESSKH 417
+ ++E V T+A+S D + ++ T ST GF + D N E + H
Sbjct: 331 CSLTLSIEDG---VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGN-ENGNGH 386
Query: 418 ALAKYQ-AQCPEGEKLVSGSDDFTLFLWNPE--KEKKSLARMT--GHQQLINCVEFSPDG 472
+ Y A GE++ SGS D T+ LW+ E +KKS +T GH+ + V +PD
Sbjct: 387 EDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDN 446
Query: 473 RIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR----LLVSGSADSTLKV 528
I S S D+ + WD G + L+GH +V VA S +S+ + +GS D ++
Sbjct: 447 EYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARI 506
Query: 529 WNMKTKK 535
W TKK
Sbjct: 507 WKW-TKK 512
Score = 217 (81.4 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 91/319 (28%), Positives = 145/319 (45%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EGHKH------------W 251
H+ V V+FS +G+ +A+G TT F +VTT + K E +
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCNKTTQVF-NVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
+ + +SPD K L +G ++ +I WD ST K+I + +RGH+Q I +L + P R
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLST-KRIIKILRGHEQDIYSLDFFP-----DGDR 311
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDG 370
S D ++RIWD+ SQC L+ VT + G LI + S DRT++VW ++ G
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIED-GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTG 370
Query: 371 VMCRTLE-------GHAHWVNTLALSTD-------YLMR-VEATSTGGFKYDPANPEESS 415
+ L+ GH V ++A S + L R V+ G K D + E +
Sbjct: 371 FLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEG-KSDKKSTCEVT 429
Query: 416 K--HALAKYQAQC-PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG 472
H C P+ E ++SGS D + W+ + L + GH+ + V S +
Sbjct: 430 YIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWD-QASGNPLLMLQGHRNSVISVAVSLNS 488
Query: 473 R----IIASASFDKSIKLW 487
+ I A+ S D ++W
Sbjct: 489 KGTEGIFATGSGDCKARIW 507
Score = 208 (78.3 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 41/111 (36%), Positives = 68/111 (61%)
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
I V FSPDG+++A+ + DK I++WD + I LRGH Q +Y + + D LVSGS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 523 DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
D ++++W+++T + L D V V +PDG+ +A+G D+ +R+W +
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAAGSLDRTVRVWDS 367
Score = 181 (68.8 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 66/269 (24%), Positives = 124/269 (46%)
Query: 115 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDT 174
SV FSP+G+ LA+G+ D +R WD++T+ + G +E +I D P
Sbjct: 260 SVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRG-------HEQDIYSL--DFFP--- 307
Query: 175 LNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRF 233
+ + +V + ++ +R ++C+ ++ + V +V SP+G+ +A+GS D TVR
Sbjct: 308 -DGDRLVSGSGDRSVRIWDLR-TSQCSLTL-SIEDGVTTVAVSPDGKLIAAGSLDRTVRV 364
Query: 234 WDVTTQTPLFKCE-------GHKHWVLCIAWSPDSKQLVSGCKNGVIHAW--DSSTGKQI 284
WD TT + + + GH+ V +A+S + +Q+ SG + + W + + K+
Sbjct: 365 WDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKS 424
Query: 285 GQPMR--GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV 342
+ GHK ++ ++ P + S KD + WD + +L H SV
Sbjct: 425 TCEVTYIGHKDFVLSVCCTPDN-----EYILSGSKDRGVIFWDQASGNPLLMLQGHRNSV 479
Query: 343 TCIRW-----GGSGLIYSASQDRTIKVWR 366
+ G G+ + S D ++W+
Sbjct: 480 ISVAVSLNSKGTEGIFATGSGDCKARIWK 508
Score = 178 (67.7 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 59/207 (28%), Positives = 96/207 (46%)
Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV-TTQTPLFKCEGHKHWVLCIA 256
R + GH + + S+ F P+G L SGSGD +VR WD+ T+Q L + V +A
Sbjct: 288 RIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTL--SIEDGVTTVA 345
Query: 257 WSPDSKQLVSGCKNGVIHAWDSSTGKQI------GQPMRGHKQWITALSWEPFHLNHQCR 310
SPD K + +G + + WDS+TG + + GH+ + +++ F N +
Sbjct: 346 VSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVA---FSNNGE-- 400
Query: 311 RFASSGKDGAIRIWDVI-----LSQCVRVLTSH---TRSVTCIRWGGSGLIYSASQDRTI 362
+ AS D +++W + S C H SV C + I S S+DR +
Sbjct: 401 QIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTP--DNEYILSGSKDRGV 458
Query: 363 KVWRASDGVMCRTLEGHAHWVNTLALS 389
W + G L+GH + V ++A+S
Sbjct: 459 IFWDQASGNPLLMLQGHRNSVISVAVS 485
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 40/135 (29%), Positives = 61/135 (45%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-CEGTPYLFYVNETEITKTL 166
GH ++V SV FS NG +ASGS D TV+ W + ++ CE T Y+ + ++
Sbjct: 385 GHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVT----YIGHKDFVLSV 440
Query: 167 ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS----L 222
T + E ++ + +F + + GH +VISV S N +
Sbjct: 441 CC-----TPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIF 495
Query: 223 ASGSGDTTVRFWDVT 237
A+GSGD R W T
Sbjct: 496 ATGSGDCKARIWKWT 510
Score = 60 (26.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 141
H+ V V+FS +G+ +A+G TT F +VTT
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCNKTTQVF-NVTT 230
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 257 (95.5 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 71/281 (25%), Positives = 134/281 (47%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + + S +D I+IWD C R+L+ HT SV C+++ +I S S D T++V
Sbjct: 228 LQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNR-VIISGSSDATVRV 286
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W G +TL H V L + ++ + +D +P + + + L ++
Sbjct: 287 WDVETGECIKTLIHHCEAVLHLRFANGIMVTCSKDRSIAV-WDMVSPRDITIRRVLVGHR 345
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + +VS S D T+ +W+ + + + + GH++ I C+++ GR++ S S
Sbjct: 346 AAVNVVDFDDRYIVSASGDRTIKVWSMDT-LEFVRTLAGHRRGIACLQYR--GRLVVSGS 402
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT----KK 535
D +I+LWD G + L GH + V + + D + +VSG+ D +KVW+++ +
Sbjct: 403 SDNTIRLWDIHSGVCLRVLEGHEELVRCIRF--DEKRIVSGAYDGKIKVWDLQAALDPRA 460
Query: 536 IEQD-----LPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ + L H V+ + + D ++ S D + +W
Sbjct: 461 LSSEICLCSLVQHTGRVFRLQF--DDFQIVSSSHDDTILIW 499
Score = 242 (90.2 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 79/293 (26%), Positives = 133/293 (45%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D ++VSG ++ I WD + + GH + L ++ N R
Sbjct: 225 VYCLQYDDD--KIVSGLRDNTIKIWDRKD-YSCSRILSGHTGSVLCLQYD----N---RV 274
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW---RAS 368
S D +R+WDV +C++ L H +V +R+ +G++ + S+DR+I VW
Sbjct: 275 IISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA-NGIMVTCSKDRSIAVWDMVSPR 333
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QC 426
D + R L GH VN + Y+ V A+ K + E + LA ++ C
Sbjct: 334 DITIRRVLVGHRAAVNVVDFDDRYI--VSASGDRTIKVWSMDTLEFVR-TLAGHRRGIAC 390
Query: 427 PE--GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI 484
+ G +VSGS D T+ LW+ L + GH++L+ C+ F D + I S ++D I
Sbjct: 391 LQYRGRLVVSGSSDNTIRLWDIHSGV-CLRVLEGHEELVRCIRF--DEKRIVSGAYDGKI 447
Query: 485 KLWDGRIGKFITTLRGHVQAVYMVAWSS-------DSRLLVSGSADSTLKVWN 530
K+WD + L + +V + D +VS S D T+ +W+
Sbjct: 448 KVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWD 500
Score = 210 (79.0 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 54/190 (28%), Positives = 93/190 (48%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C+ + GH +V+ +++ + R + SGS D TVR WDV T + H VL + ++
Sbjct: 254 CSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA 311
Query: 259 PDSKQLVSGCKNGVIHAWDSSTGKQIG--QPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD + + I + + GH+ + + ++ R S+
Sbjct: 312 --NGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDD-------RYIVSAS 362
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W + + VR L H R + C+++ G L+ S S D TI++W GV R L
Sbjct: 363 GDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR-LVVSGSSDNTIRLWDIHSGVCLRVL 421
Query: 377 EGHAHWVNTL 386
EGH V +
Sbjct: 422 EGHEELVRCI 431
Score = 179 (68.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 69/282 (24%), Positives = 125/282 (44%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+ SG D T++ WD + GH VLC+ + D++ ++SG + + WD TG
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETG 292
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSH 338
+ I + + H + + HL + KD +I +WD++ + + RVL H
Sbjct: 293 ECI-KTLIHHCEAV-------LHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGH 344
Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
+V + + ++ SAS DRTIKVW RTL GH + L + V
Sbjct: 345 RAAVNVVDFDDRYIV-SASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLV--VSG 401
Query: 399 TSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------PE- 447
+S + + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 402 SSDNTIRLWDIHSGVCLR-VLEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALDPRA 460
Query: 448 -KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+ L + H + ++F D +I++S S D +I +WD
Sbjct: 461 LSSEICLCSLVQHTGRVFRLQFD-DFQIVSS-SHDDTILIWD 500
Score = 168 (64.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 47/170 (27%), Positives = 80/170 (47%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF---KCEGHKHWVLCI 255
C ++ H EAV+ ++F+ NG + + S D ++ WD+ + + GH+ V +
Sbjct: 294 CIKTLIHHCEAVLHLRFA-NG-IMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVV 351
Query: 256 AWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS 315
+ D + +VS + I W T + + + + GH++ I L + R S
Sbjct: 352 DF--DDRYIVSASGDRTIKVWSMDTLEFV-RTLAGHRRGIACLQYRG-------RLVVSG 401
Query: 316 GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW 365
D IR+WD+ C+RVL H V CIR+ ++ S + D IKVW
Sbjct: 402 SSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKRIV-SGAYDGKIKVW 450
Score = 162 (62.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 52/184 (28%), Positives = 86/184 (46%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QTPLFKCEGTPYLFYV 157
C+ + GH +V+ +++ + R + SGS D TVR WDV T +T + CE +L +
Sbjct: 254 CSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA 311
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
N +T + D + V D+V + +R V + GH AV V F
Sbjct: 312 NGIMVTCS-KD-------RSIAVWDMVSPRDIT--IRRV------LVGHRAAVNVVDF-- 353
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+ R + S SGD T++ W + T + GH+ + C+ + + +VSG + I WD
Sbjct: 354 DDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRLWD 411
Query: 278 SSTG 281
+G
Sbjct: 412 IHSG 415
Score = 145 (56.1 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ GR + SGS D T+R WD+ + L EGH+ V CI + D
Sbjct: 380 TLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF--DE 435
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITAL---SWEPFHLNHQCRRFASSGKD 318
K++VSG +G I WD + + + +L + F L + SS D
Sbjct: 436 KRIVSGAYDGKIKVWDLQAA--LDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHD 493
Query: 319 GAIRIWDVI 327
I IWD +
Sbjct: 494 DTILIWDFL 502
Score = 41 (19.5 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 125 LASGSGDTTVRFWD 138
+ SG D T++ WD
Sbjct: 235 IVSGLRDNTIKIWD 248
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 257 (95.5 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 71/281 (25%), Positives = 134/281 (47%)
Query: 305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV 364
L + + S +D I+IWD C R+L+ HT SV C+++ +I S S D T++V
Sbjct: 228 LQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNR-VIISGSSDATVRV 286
Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS-KHALAKYQ 423
W G +TL H V L + ++ + +D +P + + + L ++
Sbjct: 287 WDVETGECIKTLIHHCEAVLHLRFANGIMVTCSKDRSIAV-WDMVSPRDITIRRVLVGHR 345
Query: 424 AQCP----EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
A + +VS S D T+ +W+ + + + + GH++ I C+++ GR++ S S
Sbjct: 346 AAVNVVDFDDRYIVSASGDRTIKVWSMDT-LEFVRTLAGHRRGIACLQYR--GRLVVSGS 402
Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT----KK 535
D +I+LWD G + L GH + V + + D + +VSG+ D +KVW+++ +
Sbjct: 403 SDNTIRLWDIHSGVCLRVLEGHEELVRCIRF--DEKRIVSGAYDGKIKVWDLQAALDPRA 460
Query: 536 IEQD-----LPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ + L H V+ + + D ++ S D + +W
Sbjct: 461 LSSEICLCSLVQHTGRVFRLQF--DDFQIVSSSHDDTILIW 499
Score = 242 (90.2 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 79/293 (26%), Positives = 133/293 (45%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
V C+ + D ++VSG ++ I WD + + GH + L ++ N R
Sbjct: 225 VYCLQYDDD--KIVSGLRDNTIKIWDRKD-YSCSRILSGHTGSVLCLQYD----N---RV 274
Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW---RAS 368
S D +R+WDV +C++ L H +V +R+ +G++ + S+DR+I VW
Sbjct: 275 IISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA-NGIMVTCSKDRSIAVWDMVSPR 333
Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA--QC 426
D + R L GH VN + Y+ V A+ K + E + LA ++ C
Sbjct: 334 DITIRRVLVGHRAAVNVVDFDDRYI--VSASGDRTIKVWSMDTLEFVR-TLAGHRRGIAC 390
Query: 427 PE--GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI 484
+ G +VSGS D T+ LW+ L + GH++L+ C+ F D + I S ++D I
Sbjct: 391 LQYRGRLVVSGSSDNTIRLWDIHSGV-CLRVLEGHEELVRCIRF--DEKRIVSGAYDGKI 447
Query: 485 KLWDGRIGKFITTLRGHVQAVYMVAWSS-------DSRLLVSGSADSTLKVWN 530
K+WD + L + +V + D +VS S D T+ +W+
Sbjct: 448 KVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWD 500
Score = 210 (79.0 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 54/190 (28%), Positives = 93/190 (48%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
C+ + GH +V+ +++ + R + SGS D TVR WDV T + H VL + ++
Sbjct: 254 CSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA 311
Query: 259 PDSKQLVSGCKNGVIHAWDSSTGKQIG--QPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
+ +V+ K+ I WD + + I + + GH+ + + ++ R S+
Sbjct: 312 --NGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDD-------RYIVSAS 362
Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
D I++W + + VR L H R + C+++ G L+ S S D TI++W GV R L
Sbjct: 363 GDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR-LVVSGSSDNTIRLWDIHSGVCLRVL 421
Query: 377 EGHAHWVNTL 386
EGH V +
Sbjct: 422 EGHEELVRCI 431
Score = 179 (68.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 69/282 (24%), Positives = 125/282 (44%)
Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
+ SG D T++ WD + GH VLC+ + D++ ++SG + + WD TG
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETG 292
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSH 338
+ I + + H + + HL + KD +I +WD++ + + RVL H
Sbjct: 293 ECI-KTLIHHCEAV-------LHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGH 344
Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
+V + + ++ SAS DRTIKVW RTL GH + L + V
Sbjct: 345 RAAVNVVDFDDRYIV-SASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLV--VSG 401
Query: 399 TSTGGFKYDPANPEESSKHALAKYQ--AQCP--EGEKLVSGSDDFTLFLWN------PE- 447
+S + + + L ++ +C + +++VSG+ D + +W+ P
Sbjct: 402 SSDNTIRLWDIHSGVCLR-VLEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALDPRA 460
Query: 448 -KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
+ L + H + ++F D +I++S S D +I +WD
Sbjct: 461 LSSEICLCSLVQHTGRVFRLQFD-DFQIVSS-SHDDTILIWD 500
Score = 168 (64.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 47/170 (27%), Positives = 80/170 (47%)
Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF---KCEGHKHWVLCI 255
C ++ H EAV+ ++F+ NG + + S D ++ WD+ + + GH+ V +
Sbjct: 294 CIKTLIHHCEAVLHLRFA-NG-IMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVV 351
Query: 256 AWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS 315
+ D + +VS + I W T + + + + GH++ I L + R S
Sbjct: 352 DF--DDRYIVSASGDRTIKVWSMDTLEFV-RTLAGHRRGIACLQYRG-------RLVVSG 401
Query: 316 GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW 365
D IR+WD+ C+RVL H V CIR+ ++ S + D IKVW
Sbjct: 402 SSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKRIV-SGAYDGKIKVW 450
Score = 162 (62.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 52/184 (28%), Positives = 86/184 (46%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QTPLFKCEGTPYLFYV 157
C+ + GH +V+ +++ + R + SGS D TVR WDV T +T + CE +L +
Sbjct: 254 CSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA 311
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
N +T + D + V D+V + +R V + GH AV V F
Sbjct: 312 NGIMVTCS-KD-------RSIAVWDMVSPRDIT--IRRV------LVGHRAAVNVVDF-- 353
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
+ R + S SGD T++ W + T + GH+ + C+ + + +VSG + I WD
Sbjct: 354 DDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRLWD 411
Query: 278 SSTG 281
+G
Sbjct: 412 IHSG 415
Score = 145 (56.1 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH + +++ GR + SGS D T+R WD+ + L EGH+ V CI + D
Sbjct: 380 TLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF--DE 435
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITAL---SWEPFHLNHQCRRFASSGKD 318
K++VSG +G I WD + + + +L + F L + SS D
Sbjct: 436 KRIVSGAYDGKIKVWDLQAA--LDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHD 493
Query: 319 GAIRIWDVI 327
I IWD +
Sbjct: 494 DTILIWDFL 502
Score = 41 (19.5 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 125 LASGSGDTTVRFWD 138
+ SG D T++ WD
Sbjct: 235 IVSGLRDNTIKIWD 248
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 252 (93.8 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 88/302 (29%), Positives = 135/302 (44%)
Query: 258 SPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK 317
SPDSK L +G N I W + K +P H+ ++ + HL C F
Sbjct: 273 SPDSKLLAAGFDNSCIKLWSLRSKKLKSEP---HQVDVSRI-----HL--ACD-FLEEED 321
Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRW--GGSGLIYSASQDRTIKVWRASDGVMCRT 375
D D L ++VL H V R+ SGL+ S S+D +I+ W
Sbjct: 322 DE-----DDNLGTEMKVLRGHCGPVYSTRFLADSSGLL-SCSEDMSIRYWDLGSFTNTVL 375
Query: 376 LEGHAHWVNTLALSTDYLMRVEATS--TGG-FKYDPANPEESSKHALAKYQAQC----PE 428
+GHA+ V L +S L A+ T + +D P LA C P
Sbjct: 376 YQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLA--DVDCVKFHPN 433
Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
L +GS D T+ LW+ + + S+ TGH+ + + FSP+G+ +ASA D+ +KLWD
Sbjct: 434 SNYLATGSTDKTVRLWSTQ-QGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 492
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVY 548
G LRGH + + +S DS L+ S S D++++VW++++ G E+
Sbjct: 493 LASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELV 552
Query: 549 AV 550
V
Sbjct: 553 GV 554
Score = 218 (81.8 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 44/145 (30%), Positives = 76/145 (52%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P S S D T LW+ ++ L GH ++CV+F P+ +A+ S DK+++L
Sbjct: 390 PHSLYFASASHDRTARLWSFDRTYP-LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 448
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
W + G + GH V +A+S + + L S D LK+W++ + + ++L GH D
Sbjct: 449 WSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN 508
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
+ ++ ++PD VAS D +R+W
Sbjct: 509 ITSLTFSPDSSLVASASMDNSVRVW 533
Score = 217 (81.4 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 65/224 (29%), Positives = 104/224 (46%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH V S +F + L S S D ++R+WD+ + T +G Y + ++
Sbjct: 336 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVW----DL----- 386
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
D+ P D + + + P+ R + GH V VKF PN LA+GS
Sbjct: 387 DISPHSLYFASASHDRTARLWSFDRTYPL-RIYA---GHLADVDCVKFHPNSNYLATGST 442
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
D TVR W + GH+ VL +A+SP+ K L S ++ + WD ++G + +
Sbjct: 443 DKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT-LYKE 501
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC 331
+RGH IT+L++ P AS+ D ++R+WD+ S C
Sbjct: 502 LRGHTDNITSLTFSP-----DSSLVASASMDNSVRVWDIRSSHC 540
Score = 165 (63.1 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 39/140 (27%), Positives = 73/140 (52%)
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491
L+S S+D ++ W+ ++ GH + ++ SP ASAS D++ +LW
Sbjct: 353 LLSCSEDMSIRYWDLGSFTNTVLYQ-GHAYPVWDLDISPHSLYFASASHDRTARLWSFDR 411
Query: 492 GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVD 551
+ GH+ V V + +S L +GS D T+++W+ + + GH V ++
Sbjct: 412 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLA 471
Query: 552 WAPDGEKVASGGKDKVLRLW 571
++P+G+ +AS G+D+ L+LW
Sbjct: 472 FSPNGKYLASAGEDQRLKLW 491
Score = 138 (53.6 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 62/230 (26%), Positives = 95/230 (41%)
Query: 314 SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVM 372
S +D +IR WD+ + H V + L + SAS DRT ++W
Sbjct: 355 SCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYP 414
Query: 373 CRTLEGHAHWV---------NTLAL-STDYLMRVEATSTGGFKYDPANPEESSKHALAKY 422
R GH V N LA STD +R+ +T G + + +
Sbjct: 415 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQG----NSVRLFTGHRGPVLSL 470
Query: 423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFD 481
A P G+ L S +D L LW + +L + + GH I + FSPD ++ASAS D
Sbjct: 471 -AFSPNGKYLASAGEDQRLKLW--DLASGTLYKELRGHTDNITSLTFSPDSSLVASASMD 527
Query: 482 KSIKLWD-----------GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSG 520
S+++WD G + + G + V V + + + LLV+G
Sbjct: 528 NSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTG 577
Score = 137 (53.3 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 36/118 (30%), Positives = 55/118 (46%)
Query: 456 MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL--RGHVQAVYMVAWSSD 513
+ GH + F D + S S D SI+ WD +G F T+ +GH V+ + S
Sbjct: 334 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD--LGSFTNTVLYQGHAYPVWDLDISPH 391
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
S S S D T ++W+ + GH +V V + P+ +A+G DK +RLW
Sbjct: 392 SLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLW 449
Score = 123 (48.4 bits), Expect = 0.00035, P = 0.00035
Identities = 40/145 (27%), Positives = 66/145 (45%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+ + L +G D+ + LW+ +K + HQ V+ S RI + F +
Sbjct: 274 PDSKLLAAGFDNSCIKLWSLRSKK---LKSEPHQ-----VDVS---RIHLACDFLEEEDD 322
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
D +G + LRGH VY + +DS L+S S D +++ W++ + GH
Sbjct: 323 EDDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYP 382
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
V+ +D +P AS D+ RLW
Sbjct: 383 VWDLDISPHSLYFASASHDRTARLW 407
Score = 48 (22.0 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 9/38 (23%), Positives = 22/38 (57%)
Query: 212 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHK 249
+ + SP+ + LA+G ++ ++ W + ++ K E H+
Sbjct: 269 TAEVSPDSKLLAAGFDNSCIKLWSLRSKK--LKSEPHQ 304
Score = 44 (20.5 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 6/28 (21%), Positives = 18/28 (64%)
Query: 115 SVKFSPNGRSLASGSGDTTVRFWDVTTQ 142
+ + SP+ + LA+G ++ ++ W + ++
Sbjct: 269 TAEVSPDSKLLAAGFDNSCIKLWSLRSK 296
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 247 (92.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 90/335 (26%), Positives = 154/335 (45%)
Query: 244 KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF 303
+C H W+ I + + +++G + W S GK I + GH + ++W
Sbjct: 96 QCMFHDDWISAIEGTEE--WILTGSYDKTSRIW-SLEGKSI-MTIVGHTDVVKDVAWVKK 151
Query: 304 HLNHQCRRFASSGKDGAIRIWDVILSQC-VRVL---TSHTRSVTCIRWGGSGLIY-SASQ 358
+ C ++S D I +W+ + + V+ L H SV I +G + S S
Sbjct: 152 D-SLSCLLLSAS-MDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSW 209
Query: 359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418
D+ +K+W T E + + ST+ + + T G P K A
Sbjct: 210 DKMLKIWSTVP-----TDEE-----DEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHKEA 259
Query: 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
++ + E++ S S D T+ +W+ E + +TG++ + NC+ +SP + +AS
Sbjct: 260 ISS--VLWSDAEEICSASWDHTIKVWDVESGSLK-STLTGNK-VFNCISYSPLCKRLASG 315
Query: 479 SFDKSIKLWDGRI--GKFIT-TLRGHVQAVYMVAWS-SDSRLLVSGSADSTLKVWNMKTK 534
S D+ I+LWD R G ++ +L H V V WS + + L+SGS D+ +K+W+ ++
Sbjct: 316 STDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLWDTRSC 375
Query: 535 KIE-QDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
K DL H D+V +VDW G + SGG D L
Sbjct: 376 KAPLYDLAAHEDKVLSVDWTDSG-LLLSGGADNKL 409
Score = 209 (78.6 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 55/194 (28%), Positives = 91/194 (46%)
Query: 178 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 237
EE + +KQ Q+ ++ GH EA+ SV +S + + S S D T++ WDV
Sbjct: 228 EESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIKVWDVE 286
Query: 238 TQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST--GKQIGQPMRGHKQWI 295
+ + G+K + CI++SP K+L SG + I WD T G + + H W+
Sbjct: 287 SGSLKSTLTGNKVFN-CISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWV 345
Query: 296 TALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-VRVLTSHTRSVTCIRWGGSGLIY 354
T++ W P H ++ S D +++WD + + L +H V + W SGL+
Sbjct: 346 TSVKWSPTHE----QQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDSGLLL 401
Query: 355 SASQDRTIKVWRAS 368
S D + +R S
Sbjct: 402 SGGADNKLYSYRYS 415
Score = 194 (73.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 76/275 (27%), Positives = 132/275 (48%)
Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRW----GGSGLIYSASQDRTIKVWRAS-DGVM 372
D RIW + + + + HT V + W S L+ SAS D+TI +W + +
Sbjct: 120 DKTSRIWS-LEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNK 178
Query: 373 CRTLE---GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG 429
+ L GHA V+++A V++T T K+ + ++ + K + P
Sbjct: 179 VKALHCCRGHAGSVDSIA--------VDSTGT---KFCSGSWDK-----MLKIWSTVPTD 222
Query: 430 EKLVSGSDDFTLFLWNPEKEKKS----LAR-----MTGHQQLINCVEFSPDGRIIASASF 480
E+ D+ P K++K+ L R ++GH++ I+ V +S D I SAS+
Sbjct: 223 EE-----DEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASW 276
Query: 481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK---IE 537
D +IK+WD G +TL G+ + +++S + L SGS D +++W+ +TK +
Sbjct: 277 DHTIKVWDVESGSLKSTLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVS 335
Query: 538 QDLPGHGDEVYAVDWAPDGEK-VASGGKDKVLRLW 571
L H V +V W+P E+ + SG D +++LW
Sbjct: 336 LSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLW 370
Score = 184 (69.8 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 91/393 (23%), Positives = 165/393 (41%)
Query: 12 RILTRFKSDDGEVAGDLLDLPLNV----NTEHLSLIVNSLLQ-QDEGTPYL---FYVNET 63
++ TRF +D+ + A D D+P ++ LS ++N LL+ ++E ++ F +
Sbjct: 3 QLQTRFFTDNKKYAVD--DVPFSIPAASEIADLSNLINKLLEAKNEFHKHVEFDFLIKGQ 60
Query: 64 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 123
+ L + L+ +++EEVV++ Y ++ + +C H + + +++ +
Sbjct: 61 FLRMPLFKHMELENISSEEVVELEYVEK--YTAPQPEQCMF----HDDWISAIEGTEEW- 113
Query: 124 SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI 183
+ +GS D T R W + ++ + G + V + K D L L+ I
Sbjct: 114 -ILTGSYDKTSRIWSLEGKS-IMTIVG--HTDVVKDVAWVKK--DSLSCLLLSASMDQTI 167
Query: 184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT------ 237
+ + V R + GHA +V S+ G SGS D ++ W
Sbjct: 168 LLWEWNV--ERNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSWDKMLKIWSTVPTDEED 225
Query: 238 --------------------TQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
T+TP+ GHK + + WS D++++ S + I WD
Sbjct: 226 EMEESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIKVWD 284
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV--- 334
+G + + G+K + +S+ P C+R AS D IR+WD V
Sbjct: 285 VESGS-LKSTLTGNKVF-NCISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLS 337
Query: 335 LTSHTRSVTCIRWGGSG--LIYSASQDRTIKVW 365
LTSHT VT ++W + + S S D +K+W
Sbjct: 338 LTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLW 370
Score = 148 (57.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 54/208 (25%), Positives = 97/208 (46%)
Query: 81 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 140
EE + +KQ Q+ ++ GH EA+ SV +S + + S S D T++ WDV
Sbjct: 228 EESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIKVWDVE 286
Query: 141 TQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT 200
+ + G ++ + + K LA +T+ + + + + + +
Sbjct: 287 SGSLKSTLTGNKVFNCISYSPLCKRLASG------STDRHIRLWDPR-----TKDGSLVS 335
Query: 201 SSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWS 258
S+ H V SVK+SP + + L SGS D V+ WD + + PL+ H+ VL + W+
Sbjct: 336 LSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWT 395
Query: 259 PDSKQLVSGCKNGVIHAWD-SSTGKQIG 285
DS L+SG + ++++ S T +G
Sbjct: 396 -DSGLLLSGGADNKLYSYRYSPTTSHVG 422
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW-SSDSR-- 515
H I+ +E + + I + S+DK+ ++W GK I T+ GH V VAW DS
Sbjct: 100 HDDWISAIEGTEEW--ILTGSYDKTSRIWSLE-GKSIMTIVGHTDVVKDVAWVKKDSLSC 156
Query: 516 LLVSGSADSTLKVW--NMKTKKIE--QDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
LL+S S D T+ +W N++ K++ GH V ++ G K SG DK+L++W
Sbjct: 157 LLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSWDKMLKIW 216
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 64/269 (23%), Positives = 113/269 (42%)
Query: 52 EGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQ---VRPVTRCTSSMPG 108
EG + V T++ K +A V D+L+ + + Q +++ R + G
Sbjct: 129 EGKSIMTIVGHTDVVKDVAWVKK-DSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRG 187
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWD-VTTQTPLFKCEGTPYLFYVNETE---ITK 164
HA +V S+ G SGS D ++ W V T E T +TE +T+
Sbjct: 188 HAGSVDSIAVDSTGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTR 247
Query: 165 TLADVLP-----LDTL---NTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKF 215
T L + ++ + EE+ + V+ V + S++ G+ + + +
Sbjct: 248 TPIVTLSGHKEAISSVLWSDAEEICSASWDHTIKVWDVESGS-LKSTLTGN-KVFNCISY 305
Query: 216 SPNGRSLASGSGDTTVRFWDVTTQTPLF---KCEGHKHWVLCIAWSPD-SKQLVSGCKNG 271
SP + LASGS D +R WD T+ H WV + WSP +QL+SG +
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDN 365
Query: 272 VIHAWDSSTGKQIGQPMRGHKQWITALSW 300
++ WD+ + K + H+ + ++ W
Sbjct: 366 MVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 231 (86.4 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 53/149 (35%), Positives = 88/149 (59%)
Query: 432 LVSGSDDFTLFLWNPEKEKKSLA----RMTGHQQLIN-CVEFSPDGRIIASASFDKSIKL 486
L+SGS D TL +WN +++++ + GH +++ CV S DG SAS+DKS++L
Sbjct: 31 LLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCV-ISSDGAYALSASWDKSLRL 89
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN-MKTKKIEQDLPGHGD 545
W+ G+ T GH V V++S+D+R +VSGS D T+K+WN + K GH +
Sbjct: 90 WELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTE 149
Query: 546 EVYAVDWAPDGEK--VASGGKDKVLRLWQ 572
V V ++P+ + + S G DK++++W+
Sbjct: 150 WVSCVRFSPNPQNPVIVSAGWDKLVKVWE 178
Score = 221 (82.9 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 64/235 (27%), Positives = 111/235 (47%)
Query: 335 LTSHTRSVTCIRWG--GSGLIYSASQDRTIKVWRAS-D----GVMCRTLEGHAHWVNTLA 387
L H VT + ++ S S+D+T+ +W + D G R+LEGH+H V+
Sbjct: 11 LEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCV 70
Query: 388 LSTDYLMRVEATSTGGFKYDPANPEESSK----HALAKYQAQ-CPEGEKLVSGSDDFTLF 442
+S+D + A+ + + ++++ H + ++VSGS D T+
Sbjct: 71 ISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIK 130
Query: 443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGR--IIASASFDKSIKLWDGRIGKFITTLRG 500
LWN + K GH + ++CV FSP+ + +I SA +DK +K+W+ + T G
Sbjct: 131 LWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIG 190
Query: 501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPD 555
H + V S D L SG D +W++ K L GDE++A+ ++P+
Sbjct: 191 HTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHA-GDEIHALVFSPN 244
Score = 217 (81.4 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 68/216 (31%), Positives = 106/216 (49%)
Query: 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG--FKYDPANPEES---SKHALAKYQ-- 423
V+ TLEGH WV +LA S + + + S ++ E++ K +L +
Sbjct: 6 VLRGTLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHI 65
Query: 424 -AQC---PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
+ C +G +S S D +L LW + + GH + V FS D R I S S
Sbjct: 66 VSDCVISSDGAYALSASWDKSLRLWELSSGQTTRT-FVGHTNDVLSVSFSADNRQIVSGS 124
Query: 480 FDKSIKLWDGRIG--KFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKTKK 535
D++IKLW+ +G K+ T +GH + V V +S + + ++VS D +KVW + + +
Sbjct: 125 RDRTIKLWN-TLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCR 183
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++ D GH + V +PDG ASGGKD V LW
Sbjct: 184 LQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLW 219
Score = 197 (74.4 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 75/313 (23%), Positives = 133/313 (42%)
Query: 246 EGHKHWVLCIAWSPDS-KQLVSGCKNGVIHAWDSSTGKQI-GQPMR---GHKQWITALSW 300
EGH WV +A S ++ L+SG ++ + W+ + +Q G P R GH ++
Sbjct: 12 EGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCV- 70
Query: 301 EPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQD 359
++ S+ D ++R+W++ Q R HT V + + I S S+D
Sbjct: 71 ----ISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRD 126
Query: 360 RTIKVWRA-SDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPEES 414
RTIK+W D T +GH WV+ + S + V S G K ++ A+
Sbjct: 127 RTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPV-IVSAGWDKLVKVWELASCRLQ 185
Query: 415 SKH----ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP 470
+ H P+G SG D LW+ + K + G + I+ + FSP
Sbjct: 186 TDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGDE--IHALVFSP 243
Query: 471 DGRIIASASFDKSIKLWDGRIGKFITTLRG-HVQA--------VYMVAWSSDSRLLVSGS 521
+ R A+ SI ++D + L+ +++ +AWS+D + L +G
Sbjct: 244 N-RYWLCAATSSSITIFDLEKKSKVDELKPEYIEKGKKSREPECVSLAWSADGQTLFAGY 302
Query: 522 ADSTLKVWNMKTK 534
D+ ++ W + ++
Sbjct: 303 TDNKIRAWGVMSR 315
Score = 183 (69.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 62/250 (24%), Positives = 115/250 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
S+ GH+ V S +G S S D ++R W++++ GH + VL +++S D+
Sbjct: 58 SLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADN 117
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+Q+VSG ++ I W++ + +GH +W++ + + P N Q S+G D +
Sbjct: 118 RQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSP---NPQNPVIVSAGWDKLV 174
Query: 322 RIWDVILSQCVRVLTSH---TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLE 377
++W+ L+ C R+ T H T + + G L S +D +W ++ +L
Sbjct: 175 KVWE--LASC-RLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSL- 230
Query: 378 GHA-HWVNTLALSTDYLMRVEATSTGGFKYD---PANPEESSKHALAK-YQAQCPEGEKL 432
HA ++ L S + ATS+ +D + +E + K +++ PE L
Sbjct: 231 -HAGDEIHALVFSPNRYWLCAATSSSITIFDLEKKSKVDELKPEYIEKGKKSREPECVSL 289
Query: 433 VSGSDDFTLF 442
+D TLF
Sbjct: 290 AWSADGQTLF 299
Score = 177 (67.4 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 62/257 (24%), Positives = 110/257 (42%)
Query: 333 RVLTSHTRSVT-CIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
R L H+ V+ C+ SAS D+++++W S G RT GH + V +++ S D
Sbjct: 57 RSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSAD 116
Query: 392 YLMRVEAT---------STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLF 442
V + + G KY + + + ++ P+ +VS D +
Sbjct: 117 NRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPN-PQNPVIVSAGWDKLVK 175
Query: 443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV 502
+W + + GH IN V SPDG + AS D LWD K + +L
Sbjct: 176 VWELASCRLQTDHI-GHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGD 234
Query: 503 QAVYMVAWSSDSRLLVSGSADS-TL-------KVWNMKTKKIEQDLPGHGDEVYAVDWAP 554
+ ++ + +S + L + ++ S T+ KV +K + IE+ E ++ W+
Sbjct: 235 E-IHALVFSPNRYWLCAATSSSITIFDLEKKSKVDELKPEYIEKGKKSREPECVSLAWSA 293
Query: 555 DGEKVASGGKDKVLRLW 571
DG+ + +G D +R W
Sbjct: 294 DGQTLFAGYTDNKIRAW 310
Score = 172 (65.6 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 58/226 (25%), Positives = 96/226 (42%)
Query: 105 SMPGHAEAVISVKFS-PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
++ GH V S+ S N L SGS D T+ W++T + G P + I
Sbjct: 10 TLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAY---GYPKRSLEGHSHIV 66
Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
V+ D + + K + T + GH V+SV FS + R +
Sbjct: 67 SDC--VISSDGAYA---LSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIV 121
Query: 224 SGSGDTTVRFWDVTTQTPL-FKCEGHKHWVLCIAWSPDSKQ--LVSGCKNGVIHAWDSST 280
SGS D T++ W+ +GH WV C+ +SP+ + +VS + ++ W+ ++
Sbjct: 122 SGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELAS 181
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
+ + GH +I ++ P C AS GKDG +WD+
Sbjct: 182 CR-LQTDHIGHTGYINTVTISPD--GSLC---ASGGKDGVTMLWDL 221
Score = 116 (45.9 bits), Expect = 0.00074, P = 0.00074
Identities = 39/170 (22%), Positives = 67/170 (39%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
T + GH V+SV FS + R + SGS D T++ W+ L C+ T + +
Sbjct: 98 TRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNT-----LGDCKYT-----ITDKGH 147
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL 222
T+ ++ V +V + K R + GH + +V SP+G
Sbjct: 148 TEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGSLC 207
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV 272
ASG D WD+ L+ + + +SP+ L + + +
Sbjct: 208 ASGGKDGVTMLWDLNESKHLYSLHAGDE-IHALVFSPNRYWLCAATSSSI 256
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 228 (85.3 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 73/262 (27%), Positives = 116/262 (44%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S+ GH V+SV S AS S D +R WD+ + + P +
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAW-------- 110
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
TLA L T V K +F V + S+ + ++S+ +SP+G+ LAS
Sbjct: 111 TLAFSPDSQYLATGTHVG----KVNIFGVESGKK-EYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
G+ D + +D+ T L EGH + + +SPDS+ LV+ +G I +D
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA 225
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
G + GH W+ +++ P H F SS D ++++WDV CV H V
Sbjct: 226 GT-LSGHASWVLNVAFCPDD-TH----FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWG 279
Query: 345 IRWGGSGL-IYSASQDRTIKVW 365
+++ G+G I S D+ I V+
Sbjct: 280 VKYNGNGSKIVSVGDDQEIHVY 301
Score = 223 (83.6 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 63/222 (28%), Positives = 106/222 (47%)
Query: 355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD--PANPE 412
S+S D I++W +G ++++ TLA S D T G + +
Sbjct: 81 SSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK 140
Query: 413 ESSKHALAKYQ---AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFS 469
E S K+ A P+G+ L SG+ D + +++ K L + GH I + FS
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL-LHTLEGHAMPIRSLTFS 199
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
PD +++ +AS D IK++D + TL GH V VA+ D VS S+D ++KVW
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 530 NMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++ T+ H D+V+ V + +G K+ S G D+ + ++
Sbjct: 260 DVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 170 (64.9 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 77/296 (26%), Positives = 127/296 (42%)
Query: 206 HAEAVISVKFSPNGR----SLASGSGDTTVRFWD-VTTQTPL-FKCEGHKHWVLCIAWSP 259
H +A+ SV + N + ++ +GS D V+ W + L + EGH+ V+ + S
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDISH 74
Query: 260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQ-WITALSWEPFHLNHQCRRFASSGKD 318
S + I WD GKQI G W A S + +L A+
Sbjct: 75 TLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYL-------ATGTHV 127
Query: 319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLE 377
G + I+ V + L + + + I + G + S + D I ++ + G + TLE
Sbjct: 128 GKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE 187
Query: 378 GHAHWVNTLALSTDYLMRVEATSTGGFK-YDP--ANPEES-SKHALAKYQ-AQCPEGEKL 432
GHA + +L S D + V A+ G K YD AN + S HA A CP+
Sbjct: 188 GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF 247
Query: 433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
VS S D ++ +W+ + + HQ + V+++ +G I S D+ I ++D
Sbjct: 248 VSSSSDKSVKVWDVGT-RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 166 (63.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 45/144 (31%), Positives = 80/144 (55%)
Query: 430 EKLVSGSDDFTLFLWNPEKEKKSLA-RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
E +V+GS D + +W E+ L + GHQ + V+ S I AS+S D I+LWD
Sbjct: 33 ETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 92
Query: 489 GRIGKFITTL-RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
GK I ++ G V A + +A+S DS+ L +G+ + ++ +++ K E L G +
Sbjct: 93 LDNGKQIKSIDAGPVDA-WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFI 151
Query: 548 YAVDWAPDGEKVASGGKDKVLRLW 571
++ ++PDG+ +ASG D ++ ++
Sbjct: 152 LSIAYSPDGKYLASGAIDGIINIF 175
Score = 158 (60.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 61/301 (20%), Positives = 128/301 (42%)
Query: 242 LFKCE-GHKHWVLCIAWSPDSKQ----LVSGCKNGVIHAWDSSTGK-QIGQPMRGHKQWI 295
LFK E H + +AW + K+ +V+G + ++ W + + + GH+ +
Sbjct: 8 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGV 67
Query: 296 TALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIY 354
++ ++H ASS D IR+WD+ + ++ + + + + S +
Sbjct: 68 VSVD-----ISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLA 122
Query: 355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE- 412
+ + + ++ G +L+ ++ ++A S D G +D A +
Sbjct: 123 TGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 413 --ESSKHALA-KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFS 469
HA+ + P+ + LV+ SDD + +++ + + ++GH + V F
Sbjct: 183 LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA-GTLSGHASWVLNVAFC 241
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
PD S+S DKS+K+WD + T H V+ V ++ + +VS D + V+
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Query: 530 N 530
+
Sbjct: 302 D 302
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 32/124 (25%), Positives = 54/124 (43%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GHA + S+ FSP+ + L + S D ++ +DV GH WVL +A+ PD
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
VS + + WD T + H+ + + + N + S G D I
Sbjct: 245 THFVSSSSDKSVKVWDVGTRTCV-HTFFDHQDQVWGVKY-----NGNGSKIVSVGDDQEI 298
Query: 322 RIWD 325
++D
Sbjct: 299 HVYD 302
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 228 (85.3 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 74/292 (25%), Positives = 130/292 (44%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW---DVILSQCVRVLTSHTRSVTCI 345
+ H I +++WE + + D +++W D L + L H V +
Sbjct: 13 QAHDDAIWSVAWET-NKKENIETVVTGSLDDLVKVWKWRDERL-ELQWSLEGHQLGVVSV 70
Query: 346 RWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF 404
+ + S+S D I++W +G ++++ TLA S D T G
Sbjct: 71 DISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQYLATGTHMGKV 130
Query: 405 KYD--PANPEESSKHALAKYQ---AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
+ +E S K+ A P+G+ L SG+ D + +++ K L + GH
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL-LHTLEGH 189
Query: 460 QQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVS 519
I + FSPD +++ +AS D IK++D + TL GH V VA+ D VS
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVS 249
Query: 520 GSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
S+D ++KVW++ T+ H D+V+ V + +G K+ S G D+ + ++
Sbjct: 250 SSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 224 (83.9 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 71/262 (27%), Positives = 116/262 (44%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S+ GH V+SV S AS S D +R WD+ + + P +
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAW-------- 110
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
TLA L T + K +F V + S+ + ++S+ +SP+G+ LAS
Sbjct: 111 TLAFSPDSQYLATGTHMG----KVNIFGVESGKK-EYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
G+ D + +D+ T L EGH + + +SPDS+ LV+ +G I +D
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA 225
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
G + GH W+ +++ P H F SS D ++++WDV C+ H V
Sbjct: 226 GT-LSGHASWVLNVAFCPDD-TH----FVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWG 279
Query: 345 IRWGGSGL-IYSASQDRTIKVW 365
+++ G+G I S D+ I V+
Sbjct: 280 VKYNGNGSKIVSVGDDQEIHVY 301
Score = 159 (61.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 62/301 (20%), Positives = 129/301 (42%)
Query: 242 LFKCE-GHKHWVLCIAWSPDSKQ----LVSGCKNGVIHAWDSSTGK-QIGQPMRGHKQWI 295
LFK E H + +AW + K+ +V+G + ++ W + ++ + GH+ +
Sbjct: 8 LFKQEQAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGV 67
Query: 296 TALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIY 354
++ ++H ASS D IR+WD+ + ++ + + + + S +
Sbjct: 68 VSVD-----ISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQYLA 122
Query: 355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE- 412
+ + + ++ G +L+ ++ ++A S D G +D A +
Sbjct: 123 TGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 413 --ESSKHALA-KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFS 469
HA+ + P+ + LV+ SDD + +++ + + ++GH + V F
Sbjct: 183 LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA-GTLSGHASWVLNVAFC 241
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
PD S+S DKS+K+WD I T H V+ V ++ + +VS D + V+
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Query: 530 N 530
+
Sbjct: 302 D 302
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/124 (26%), Positives = 54/124 (43%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GHA + S+ FSP+ + L + S D ++ +DV GH WVL +A+ PD
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
VS + + WD T I H+ + + + N + S G D I
Sbjct: 245 THFVSSSSDKSVKVWDVGTRTCI-HTFFDHQDQVWGVKY-----NGNGSKIVSVGDDQEI 298
Query: 322 RIWD 325
++D
Sbjct: 299 HVYD 302
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 199 (75.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 74/314 (23%), Positives = 137/314 (43%)
Query: 194 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL--FKCEGHKHW 251
+PV ++ GH V ++ FS + ++ S + D+ ++ W+ +T + CE +
Sbjct: 401 QPVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAADS-IKIWNRSTLQCIRTMPCE----Y 455
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
LC + P +Q+V G K G + +D ++G + + + H + ++S P R
Sbjct: 456 ALCSFFVPGDRQVVIGTKTGNLQLYDLASGTLL-ETIAAHDGALWSMSLSPDQ-----RG 509
Query: 312 FASSGKDGAIRIWDVIL-----SQCVRVLTSHTRS------VTCIRWGGSGLIYSASQ-D 359
F + G D A++ WD L S R+ TR+ V C+ + + + + S D
Sbjct: 510 FVTGGADKAVKFWDFELVTDKNSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLD 569
Query: 360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL 419
T+KV+ +L GH V + +S D + ++ K + + +
Sbjct: 570 CTVKVFYVDTLKFFLSLYGHKLPVLCMDISHDGALIATGSADRNVKIWGLDFGDCHRSLF 629
Query: 420 AK-----YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRI 474
A Y P+ + D + W+ +K + + + GH Q I C+ SP G
Sbjct: 630 AHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDADKFEH-IQTLEGHHQEIWCLAVSPSGDY 688
Query: 475 IASASFDKSIKLWD 488
+ SAS DKS++LW+
Sbjct: 689 VVSASHDKSLRLWE 702
Score = 194 (73.4 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 72/327 (22%), Positives = 146/327 (44%)
Query: 269 KNGVIHAWDSSTGKQIGQPMR-------GHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
+N ++ + + QP+R GH+ + LS+ ++ S+ D +I
Sbjct: 384 QNNLVELYSLNASLPAPQPVRTSRITIGGHRSDVRTLSFSSDNI-----AVLSAAAD-SI 437
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
+IW+ QC+R + ++ G + ++ ++++ + G + T+ H
Sbjct: 438 KIWNRSTLQCIRTMPCEY-ALCSFFVPGDRQVVIGTKTGNLQLYDLASGTLLETIAAHDG 496
Query: 382 WVNTLALSTDYLMRVEATSTGGFKY---DPANPEESSKHALAKYQAQ---------CPE- 428
+ +++LS D V + K+ + + S++ L+ Q + C
Sbjct: 497 ALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSVKQTRTLQLDEDVLCVSY 556
Query: 429 --GEKLVSGSD-DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIK 485
+KL++ S D T+ ++ + K L+ + GH+ + C++ S DG +IA+ S D+++K
Sbjct: 557 SPNQKLLAVSLLDCTVKVFYVDTLKFFLS-LYGHKLPVLCMDISHDGALIATGSADRNVK 615
Query: 486 LWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD 545
+W G +L H +V + + S L + D +K W+ + Q L GH
Sbjct: 616 IWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQ 675
Query: 546 EVYAVDWAPDGEKVASGGKDKVLRLWQ 572
E++ + +P G+ V S DK LRLW+
Sbjct: 676 EIWCLAVSPSGDYVVSASHDKSLRLWE 702
Score = 179 (68.1 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 76/315 (24%), Positives = 135/315 (42%)
Query: 97 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL--FKCEGTPYL 154
+PV ++ GH V ++ FS + ++ S + D+ ++ W+ +T + CE
Sbjct: 401 QPVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAADS-IKIWNRSTLQCIRTMPCEYALCS 459
Query: 155 FYV-NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISV 213
F+V + ++ V+ T N + ++ + T ++ H A+ S+
Sbjct: 460 FFVPGDRQV------VIGTKTGNLQ-----------LYDLASGT-LLETIAAHDGALWSM 501
Query: 214 KFSPNGRSLASGSGDTTVRFWD---VTTQTPLFKCEGHKHW--------VLCIAWSPDSK 262
SP+ R +G D V+FWD VT + K K VLC+++SP+ K
Sbjct: 502 SLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSVKQTRTLQLDEDVLCVSYSPNQK 561
Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
L + + + T K + GHK + + ++H A+ D ++
Sbjct: 562 LLAVSLLDCTVKVFYVDTLKFF-LSLYGHKLPVLCMD-----ISHDGALIATGSADRNVK 615
Query: 323 IWDVILSQCVRVLTSHTRSVTCIRW-GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
IW + C R L +H SV +R+ S L ++A +D IK W A +TLEGH
Sbjct: 616 IWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQ 675
Query: 382 --WVNTLALSTDYLM 394
W ++ S DY++
Sbjct: 676 EIWCLAVSPSGDYVV 690
Score = 154 (59.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 55/223 (24%), Positives = 94/223 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ H A+ S+ SP+ R +G D V+FWD T T V +T +
Sbjct: 490 TIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDK---NSTQKRLSVKQTRTLQ 546
Query: 165 TLADVLPLDTLNTEEV--VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL 222
DVL + +++ V ++ VF V + + S+ GH V+ + S +G +
Sbjct: 547 LDEDVLCVSYSPNQKLLAVSLLDCTVKVFYVDTL-KFFLSLYGHKLPVLCMDISHDGALI 605
Query: 223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK 282
A+GS D V+ W + H V+ + + P S + K+ I WD+ +
Sbjct: 606 ATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDADKFE 665
Query: 283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
I Q + GH Q I L+ P S+ D ++R+W+
Sbjct: 666 HI-QTLEGHHQEIWCLAVSP-----SGDYVVSASHDKSLRLWE 702
Score = 153 (58.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 64/268 (23%), Positives = 110/268 (41%)
Query: 231 VRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRG 290
V WD+ + +G+K V C+ SPD L G ++G I + +G+ G
Sbjct: 47 VFIWDLRKGEKILILQGNKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLSGEG-NITFNG 105
Query: 291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT-CIRWGG 349
HK +T+L ++ R AS KD + IWDVI + L H +VT +
Sbjct: 106 HKAAVTSLKYDQLG-----GRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRE 160
Query: 350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAH--WVNTLALSTDYLMRVEATST-GGFKY 406
L+ ++ +D +K W + +T+ GH W L L+ A S +
Sbjct: 161 RNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEEKRLITGAADSELRAWDI 220
Query: 407 DPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA-------RMTGH 459
D + + K +CP G + S+D TL + + E + L+ G
Sbjct: 221 DYLQEIDDPEEPEPKKIKECP-GIQDTPESEDSTLEADDEKSEDRILSCSKAGSIMREGR 279
Query: 460 QQLINCVEFSPDGRIIASASFDKSIKLW 487
+++N + GRI+A D ++++
Sbjct: 280 DRVVN-LAVDKTGRILACHGTDSVLEVF 306
Score = 150 (57.9 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
GH AV S+K+ G LASGS DT V WDV ++ L++ +GHK V + + L
Sbjct: 105 GHKAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLL 164
Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
V+ K+ ++ WD + + M GH+ + W ++ + +R + D +R W
Sbjct: 165 VTSGKDTMVKWWDLDN-QHCFKTMVGHRTEV----WGLVLVSEE-KRLITGAADSELRAW 218
Query: 325 DV 326
D+
Sbjct: 219 DI 220
Score = 147 (56.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 34/145 (23%), Positives = 70/145 (48%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+G L G +D + +++ + ++ GH+ + +++ G +AS S D + +
Sbjct: 75 PDGLHLAVGYEDGAIRIFSLLSGEGNIT-FNGHKAAVTSLKYDQLGGRLASGSKDTDVII 133
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
WD + L+GH AV + + LLV+ D+ +K W++ + + + GH E
Sbjct: 134 WDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTE 193
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
V+ + + +++ +G D LR W
Sbjct: 194 VWGLVLVSEEKRLITGAADSELRAW 218
Score = 142 (55.0 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 36/131 (27%), Positives = 66/131 (50%)
Query: 441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG 500
+F+W+ K +K L + G++Q + C+ SPDG +A D +I+++ G+ T G
Sbjct: 47 VFIWDLRKGEKILI-LQGNKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLSGEGNITFNG 105
Query: 501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVA 560
H AV + + L SGS D+ + +W++ + L GH D V + + +
Sbjct: 106 HKAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLV 165
Query: 561 SGGKDKVLRLW 571
+ GKD +++ W
Sbjct: 166 TSGKDTMVKWW 176
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 42/173 (24%), Positives = 76/173 (43%)
Query: 364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEES---SKHAL 419
+W G L+G+ V L S D L G + + + E + + H
Sbjct: 49 IWDLRKGEKILILQGNKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLSGEGNITFNGHKA 108
Query: 420 AKYQAQCPE-GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
A + + G +L SGS D + +W+ E L R+ GH+ + F + ++ ++
Sbjct: 109 AVTSLKYDQLGGRLASGSKDTDVIIWDVINES-GLYRLKGHKDAVTQALFLRERNLLVTS 167
Query: 479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
D +K WD T+ GH V+ + S+ + L++G+ADS L+ W++
Sbjct: 168 GKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEEKRLITGAADSELRAWDI 220
Score = 136 (52.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 65/267 (24%), Positives = 105/267 (39%)
Query: 194 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVL 253
R +C +MP E + F P R + G+ ++ +D+ + T L H +
Sbjct: 442 RSTLQCIRTMP--CEYALCSFFVPGDRQVVIGTKTGNLQLYDLASGTLLETIAAHDGALW 499
Query: 254 CIAWSPDSKQLVSGCKNGVIHAWDSS--TGKQIGQPMRGHKQWITA-LSWEPFHLNHQCR 310
++ SPD + V+G + + WD T K Q KQ T L + +++
Sbjct: 500 SMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSVKQTRTLQLDEDVLCVSYSPN 559
Query: 311 R--FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRA 367
+ A S D ++++ V + L H V C+ G LI + S DR +K+W
Sbjct: 560 QKLLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLCMDISHDGALIATGSADRNVKIWGL 619
Query: 368 SDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ---- 423
G R+L H V L + A K A+ E + +Q
Sbjct: 620 DFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWC 679
Query: 424 -AQCPEGEKLVSGSDDFTLFLWNPEKE 449
A P G+ +VS S D +L LW +E
Sbjct: 680 LAVSPSGDYVVSASHDKSLRLWERTRE 706
Score = 111 (44.1 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 43/182 (23%), Positives = 74/182 (40%)
Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
+ G+ + V + SP+G LA G D +R + L EG F ++ +T
Sbjct: 61 LQGNKQEVTCLCPSPDGLHLAVGYEDGAIRIFS------LLSGEGN-ITFNGHKAAVTSL 113
Query: 166 LADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG 225
D L + + D++ V + R + GH +AV F L +
Sbjct: 114 KYDQLGGRLASGSKDTDVIIWD--VINESGLYR----LKGHKDAVTQALFLRERNLLVTS 167
Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285
DT V++WD+ Q GH+ V + + K+L++G + + AWD ++I
Sbjct: 168 GKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEEKRLITGAADSELRAWDIDYLQEID 227
Query: 286 QP 287
P
Sbjct: 228 DP 229
Score = 59 (25.8 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
C +M GH V + + L +G+ D+ +R WD+
Sbjct: 183 CFKTMVGHRTEVWGLVLVSEEKRLITGAADSELRAWDI 220
>TAIR|locus:2096254 [details] [associations]
symbol:LRS1 "AT3G05090" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010311 KO:K15361
InterPro:IPR021772 Pfam:PF11816 GO:GO:0080008 HOGENOM:HOG000007343
OMA:NRLYSAG EMBL:AY056292 EMBL:AY127022 EMBL:AY142674 EMBL:BT000631
EMBL:AK226843 IPI:IPI00517137 RefSeq:NP_566246.1 RefSeq:NP_850516.1
UniGene:At.48620 ProteinModelPortal:Q93ZS6 SMR:Q93ZS6 PaxDb:Q93ZS6
PRIDE:Q93ZS6 EnsemblPlants:AT3G05090.1 EnsemblPlants:AT3G05090.2
GeneID:819671 KEGG:ath:AT3G05090 TAIR:At3g05090 InParanoid:Q93ZS6
PhylomeDB:Q93ZS6 ProtClustDB:CLSN2688081 ArrayExpress:Q93ZS6
Genevestigator:Q93ZS6 Uniprot:Q93ZS6
Length = 753
Score = 252 (93.8 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 76/277 (27%), Positives = 121/277 (43%)
Query: 306 NHQCRRFASSGKDGAIRIW--DVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIK 363
N Q F S +DG ++ W D + C SH V G + S S D T+K
Sbjct: 50 NDQSYLFTGS-RDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGESTLVSCSSDTTVK 108
Query: 364 VWRA-SDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG--FKYD------PANPEES 414
W SDGV RTL H+ +V LA++ V + GG F +D P
Sbjct: 109 TWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPND 168
Query: 415 SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKE-KKSLARMTGHQQLINCVEFSPDGR 473
+ + A P GS + +P ++A+ GH++ + + + G
Sbjct: 169 ANEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAK--GHKESVYALAMNDTGT 226
Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
++ S +K +++WD R G LRGH V ++ S R +SGS+DS +++W++
Sbjct: 227 MLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQ 286
Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL 570
++ H D V+A+ P V SGG+D+ L L
Sbjct: 287 QRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 67/301 (22%), Positives = 119/301 (39%)
Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI-GQPMRGHKQWIT--ALSWEPFHLNHQ 308
VL + S D L +G ++G + W H W+ AL+ E
Sbjct: 43 VLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGES------ 96
Query: 309 CRRFASSGKDGAIRIWDVILSQ-CVRVLTSHTRSVTCIRWGG--SGLIYSASQDRTIKVW 365
S D ++ WD + C R L H+ VTC+ + ++ S + +W
Sbjct: 97 --TLVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIW 154
Query: 366 ----------RASDGVMCRTLEGHAHWVNTL-ALSTDYLMRVEATSTGGFKYDPANPEES 414
+ +D + G V +L + + + V+++ + G+ A +
Sbjct: 155 DIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKE 214
Query: 415 SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRI 474
S +ALA G LVSG + L +W+P KS+ ++ GH + + GR
Sbjct: 215 SVYALAMNDT----GTMLVSGGTEKVLRVWDPRTGSKSM-KLRGHTDNVRVLLLDSTGRF 269
Query: 475 IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534
S S D I+LWD + + T H +V+ +A + + SG D L + ++ T+
Sbjct: 270 CLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLATR 329
Query: 535 K 535
+
Sbjct: 330 E 330
Score = 162 (62.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 55/231 (23%), Positives = 99/231 (42%)
Query: 353 IYSASQDRTIKVWRAS-DGVMCR-TLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPA 409
+++ S+D T+K W D C T E H WVN AL+ + + V +S K +D
Sbjct: 55 LFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGESTL-VSCSSDTTVKTWDGL 113
Query: 410 NPEESSK----HA-LAKYQAQCPEGEKLV-SGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
+ ++ H+ A + +V SG +F+W+ E + + +
Sbjct: 114 SDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDANE-- 171
Query: 464 NCVEFSPDGRI--IASASFDKSIKLWDGRIGKFITTL-RGHVQAVYMVAWSSDSRLLVSG 520
+ +G + + + +I + + T+ +GH ++VY +A + +LVSG
Sbjct: 172 DSSSNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSG 231
Query: 521 SADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
+ L+VW+ +T L GH D V + G SG D ++RLW
Sbjct: 232 GTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLW 282
Score = 124 (48.7 bits), Expect = 0.00038, P = 0.00038
Identities = 59/271 (21%), Positives = 106/271 (39%)
Query: 102 CTSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQ-TPLFKCEGTPYLFYVNE 159
CT ++ H++ V + + N +ASG V WD+ +P+ K NE
Sbjct: 118 CTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDA------NE 171
Query: 160 TEITKTL-ADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMP-GHAEAVISVKFSP 217
+ V L T+ + + + Q P T ++ GH E+V ++ +
Sbjct: 172 DSSSNGANGPVTSLRTVGSSNNISV--------QSSPSHGYTPTIAKGHKESVYALAMND 223
Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
G L SG + +R WD T + K GH V + + +SG + +I WD
Sbjct: 224 TGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWD 283
Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS 337
+ + H + AL+ P +H S G+D + + D+ + V + T
Sbjct: 284 LGQQRCL-HTYAVHTDSVWALACNP-SFSH----VYSGGRDQCLYLTDLATRESVLLCTK 337
Query: 338 -HTRSVTCIRWGGSGLIYSASQDRTIKVWRA 367
H ++ I+ A+ D +++ W A
Sbjct: 338 EHPIQQLALQ---DNSIWVATTDSSVERWPA 365
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 250 (93.1 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 76/230 (33%), Positives = 116/230 (50%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH + + S+ F+ +GR++ASGSGD TVR WD+ GT + E +T T+A
Sbjct: 386 GHEQDIYSLDFARDGRTIASGSGDRTVRLWDIEN--------GTALTVFTIEDGVT-TVA 436
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
+ P +D + + Q PV R GH ++V SV FSPNGR L +GS
Sbjct: 437 -ISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGP-DGHKDSVYSVAFSPNGRDLVTGSL 494
Query: 228 DTTVRFWDVTT-----QTPLFK---C----EGHKHWVLCIAWSPDSKQLVSGCKNGVIHA 275
D T++ W++ T Q K C EGH+ +VL +A +PD++ ++SG K+ +
Sbjct: 495 DKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQF 554
Query: 276 WDSSTGK-QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
WD TG Q+ ++GHK + +++ P FA+ D RIW
Sbjct: 555 WDPRTGSTQL--MLQGHKNSVISVAPSPTG-----GFFATGSGDMRARIW 597
Score = 228 (85.3 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 49/149 (32%), Positives = 89/149 (59%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+G+ L +G++D + +W+ + + GH+Q I ++F+ DGR IAS S D++++L
Sbjct: 356 PDGKYLATGAEDKQIRVWDITTRTIRI-QFAGHEQDIYSLDFARDGRTIASGSGDRTVRL 414
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK-KIEQ-DLP-GH 543
WD G +T V VA S D++ + +GS D +++VW++ +E+ + P GH
Sbjct: 415 WDIENGTALTVFTIE-DGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGH 473
Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
D VY+V ++P+G + +G DK ++LW+
Sbjct: 474 KDSVYSVAFSPNGRDLVTGSLDKTIKLWE 502
Score = 207 (77.9 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 65/256 (25%), Positives = 118/256 (46%)
Query: 212 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG 271
SV FSP+G+ LA+G+ D +R WD+TT+T + GH+ + + ++ D + + SG +
Sbjct: 351 SVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDR 410
Query: 272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC 331
+ WD G + + + +T ++ P + A+ D ++R+WD+
Sbjct: 411 TVRLWDIENGTAL--TVFTIEDGVTTVAISP-----DTKYVAAGSLDKSVRVWDLTQGCP 463
Query: 332 VRVLTS---HTRSVTCIRWGGSGL-IYSASQDRTIKVW-----------RASDGVMC-RT 375
V L H SV + + +G + + S D+TIK+W + S G C +T
Sbjct: 464 VERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKT 523
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFKY-DPANPE-----ESSKHALAKYQAQCPEG 429
EGH +V ++AL+ D + + G ++ DP + K+++ A P G
Sbjct: 524 FEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISV-APSPTG 582
Query: 430 EKLVSGSDDFTLFLWN 445
+GS D +W+
Sbjct: 583 GFFATGSGDMRARIWS 598
Score = 191 (72.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 37/119 (31%), Positives = 70/119 (58%)
Query: 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH----VQAVYM--VAWSS 512
H+ ++ CV FS DG+ +A+ ++S +++D G+ + L+ +Y+ V +S
Sbjct: 298 HESVVCCVRFSADGKYVATGC-NRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSP 356
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
D + L +G+ D ++VW++ T+ I GH ++Y++D+A DG +ASG D+ +RLW
Sbjct: 357 DGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLW 415
Score = 188 (71.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 76/301 (25%), Positives = 135/301 (44%)
Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
H V V+FS +G+ +A+G + + + +DV T + C + + + T L
Sbjct: 298 HESVVCCVRFSADGKYVATGC-NRSAQIFDVNTGEKV--C-----VLQDDNADTTGDLYI 349
Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMP--GHAEAVISVKFSPNGRSLASGS 226
+ + + + KQ +V +T T + GH + + S+ F+ +GR++ASGS
Sbjct: 350 RSVCFSPDGKYLATGAEDKQ--IRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGS 407
Query: 227 GDTTVRFWDVTTQTPL--FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG--- 281
GD TVR WD+ T L F E V +A SPD+K + +G + + WD + G
Sbjct: 408 GDRTVRLWDIENGTALTVFTIEDG---VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPV 464
Query: 282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL------------S 329
+++ P GHK + ++++ P N R + D I++W++
Sbjct: 465 ERLEGP-DGHKDSVYSVAFSP---NG--RDLVTGSLDKTIKLWELATPRGNMQNQGSKGG 518
Query: 330 QCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
+CV+ H V + + S S+DR ++ W G L+GH + V ++A
Sbjct: 519 RCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAP 578
Query: 389 S 389
S
Sbjct: 579 S 579
Score = 185 (70.2 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 48/159 (30%), Positives = 83/159 (52%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEK--EKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI 484
P+ + + +GS D ++ +W+ + + L GH+ + V FSP+GR + + S DK+I
Sbjct: 439 PDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTI 498
Query: 485 KLWD-----GRI-------GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK 532
KLW+ G + G+ + T GH V VA + D++ ++SGS D ++ W+ +
Sbjct: 499 KLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPR 558
Query: 533 TKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
T + L GH + V +V +P G A+G D R+W
Sbjct: 559 TGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIW 597
Score = 167 (63.8 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 37/109 (33%), Positives = 59/109 (54%)
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
I V FSPDG+ +A+ + DK I++WD GH Q +Y + ++ D R + SGS
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSG 408
Query: 523 DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
D T+++W+++ D V V +PD + VA+G DK +R+W
Sbjct: 409 DRTVRLWDIENGTALTVFTIE-DGVTTVAISPDTKYVAAGSLDKSVRVW 456
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 49/141 (34%), Positives = 67/141 (47%)
Query: 98 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYV 157
PV R GH ++V SV FSPNGR L +GS D T++ W++ T + +G+ V
Sbjct: 463 PVERLEGP-DGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCV 521
Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSM-PGHAEAVISVKFS 216
E + + L T + + V+ + F P T T M GH +VISV S
Sbjct: 522 KTFEGHRDFVLSVAL-TPDNQWVMSGSKDRGVQFW-DPRTGSTQLMLQGHKNSVISVAPS 579
Query: 217 PNGRSLASGSGDTTVRFWDVT 237
P G A+GSGD R W T
Sbjct: 580 PTGGFFATGSGDMRARIWSYT 600
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 49/189 (25%), Positives = 78/189 (41%)
Query: 353 IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE 412
++ + V+ DGV + +V A S D +RV T G +
Sbjct: 414 LWDIENGTALTVFTIEDGVTTVAISPDTKYV--AAGSLDKSVRVWDL-TQGCPVERLEGP 470
Query: 413 ESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN---PE--------KEKKSLARMTGHQQ 461
+ K ++ A P G LV+GS D T+ LW P K + + GH+
Sbjct: 471 DGHKDSVYSV-AFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRD 529
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
+ V +PD + + S S D+ ++ WD R G L+GH +V VA S +GS
Sbjct: 530 FVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGS 589
Query: 522 ADSTLKVWN 530
D ++W+
Sbjct: 590 GDMRARIWS 598
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 233 (87.1 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 86/313 (27%), Positives = 138/313 (44%)
Query: 246 EGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGK-QIGQP---MRGHKQWITALSW 300
+GH WV IA +P ++ S ++ I W + + G P +RGH +++ +
Sbjct: 15 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV-- 72
Query: 301 EPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQ 358
+ +FA SG DG +R+WD+ R HT+ V + + I S S+
Sbjct: 73 ----VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 128
Query: 359 DRTIKVWRASDGVMCRTL--EGHAHWVNTLALSTDYLMRVEATSTGGFK----YDPANPE 412
D+TIK+W GV T+ E H+ WV+ + S + + S G K ++ AN +
Sbjct: 129 DKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVKVWNLANCK 186
Query: 413 ESSKH----ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF 468
+ H P+G SG D LW+ E K L + G +IN + F
Sbjct: 187 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN-EGKHLYTLDGGD-IINALCF 244
Query: 469 SPDGRIIASASFDKSIKLWDGRIGKFI----------TTLRGHVQAVYMVAWSSDSRLLV 518
SP+ R A+ SIK+WD GK I T+ + +AWS+D + L
Sbjct: 245 SPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF 302
Query: 519 SGSADSTLKVWNM 531
+G D+ ++VW +
Sbjct: 303 AGYTDNLVRVWQV 315
Score = 212 (79.7 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 68/250 (27%), Positives = 116/250 (46%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GH+ V V S +G+ SGS D T+R WD+TT T + GH VL +A+S D+
Sbjct: 61 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 120
Query: 262 KQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
+Q+VSG ++ I W++ K Q H +W++ + + P N S G D
Sbjct: 121 RQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSP---NSSNPIIVSCGWDKL 176
Query: 321 IRIWDVILSQCVRVLTSH---TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL 376
+++W+ L+ C ++ T+H T + + G L S +D +W ++G TL
Sbjct: 177 VKVWN--LANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 233
Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP---EESSKHALA-KYQAQCPEGEKL 432
+G +N L S + AT +D +E + ++ +A+ P+ L
Sbjct: 234 DG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 292
Query: 433 VSGSDDFTLF 442
+D TLF
Sbjct: 293 AWSADGQTLF 302
Score = 208 (78.3 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 67/211 (31%), Positives = 99/211 (46%)
Query: 375 TLEGHAHWVNTLALST---DYLMRVEATST---GGFKYDPAN---PEESSK-HA-LAKYQ 423
TL+GH WV +A + D ++ T D N P+ + + H+
Sbjct: 13 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 72
Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
+G+ +SGS D TL LW+ + R GH + + V FS D R I S S DK+
Sbjct: 73 VISSDGQFALSGSWDGTLRLWDLTTGTTT-RRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 131
Query: 484 IKLWDGR-IGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKTKKIEQDL 540
IKLW+ + K+ H + V V +S +S ++VS D +KVWN+ K++ +
Sbjct: 132 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 191
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
GH + V +PDG ASGGKD LW
Sbjct: 192 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 222
Score = 199 (75.1 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 73/309 (23%), Positives = 129/309 (41%)
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-----VRVLTSHTRSV 342
++GH W+T ++ P + S+ +D I +W + + R L H+ V
Sbjct: 14 LKGHNGWVTQIATTPQFPD----MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 69
Query: 343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT-- 399
+ + G S S D T+++W + G R GH V ++A S+D V +
Sbjct: 70 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 129
Query: 400 -------STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
+ G KY + S + ++ +VS D + +WN K
Sbjct: 130 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS-SNPIIVSCGWDKLVKVWNLANCKLK 188
Query: 453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS 512
+ GH +N V SPDG + AS D LWD GK + TL G + + +S
Sbjct: 189 TNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSP 246
Query: 513 DSRLLVSGSADSTLKVWNMKTKKIEQDLP---------GHGDEVYAVDWAPDGEKVASGG 563
+ L + + S +K+W+++ K I +L + ++ W+ DG+ + +G
Sbjct: 247 NRYWLCAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 305
Query: 564 KDKVLRLWQ 572
D ++R+WQ
Sbjct: 306 TDNLVRVWQ 314
Score = 173 (66.0 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 71/276 (25%), Positives = 118/276 (42%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
++ GH+ V V S +G+ SGS D T+R WD+TT GT +V T+
Sbjct: 61 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT--------GTTTRRFVGHTK--- 109
Query: 165 TLADVLPLD-TLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS- 221
DVL + + + ++V K ++ V + T H+E V V+FSPN +
Sbjct: 110 ---DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 166
Query: 222 -LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
+ S D V+ W++ GH ++ + SPD SG K+G WD +
Sbjct: 167 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 226
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK----DGAIRIWDVILSQCVRVLT 336
GK + + G I AL + P + C S K +G I I D + + + +
Sbjct: 227 GKHL-YTLDGG-DIINALCFSP-NRYWLCAATGPSIKIWDLEGKI-IVDELKQEVISTSS 282
Query: 337 -SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDG 370
+ T + W G +++ D ++VW+ + G
Sbjct: 283 KAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 318
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 57/239 (23%), Positives = 98/239 (41%)
Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
T GH + V+SV FS + R + SGS D T++ W+ L C+ T V +
Sbjct: 101 TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-----LGVCKYT-----VQDESH 150
Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT--SSMPGHAEAVISVKFSPNGR 220
++ ++ V + +V + K + +V + C ++ GH + +V SP+G
Sbjct: 151 SEWVSCVRFSPNSSNPIIVSCGWDK--LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 208
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEG-----------HKHWVLCIAWSPDSKQLVSGCK 269
ASG D WD+ L+ +G +++W LC A P K + +
Sbjct: 209 LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW-LCAATGPSIK--IWDLE 265
Query: 270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
+I D + I + T+L+W + Q FA D +R+W V +
Sbjct: 266 GKIIV--DELKQEVISTSSKAEPPQCTSLAWSA---DGQTL-FAGY-TDNLVRVWQVTI 317
Score = 40 (19.1 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 468 FSPDGRIIASASFDKSIKLWDGRIG 492
+S DG+ + + D +++W IG
Sbjct: 294 WSADGQTLFAGYTDNLVRVWQVTIG 318
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 240 (89.5 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 83/300 (27%), Positives = 130/300 (43%)
Query: 258 SPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK 317
SPDSK L +G N I W + K +P H+ ++ + HL
Sbjct: 295 SPDSKLLAAGFDNSCIKLWSLRSKKLKSEP---HQVDVSRI-----HLACDILEEEDDED 346
Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLE 377
D A ++ C V + TR + SGL+ S S+D +I+ W +
Sbjct: 347 DNAGTEMKILRGHCGPVYS--TRFLA----DSSGLL-SCSEDMSIRYWDLGSFTNTVLYQ 399
Query: 378 GHAHWVNTLALS--TDYLMRVEATSTGG-FKYDPANPEESSKHALAKYQAQC----PEGE 430
GHA+ V L +S + Y T + +D P LA C P
Sbjct: 400 GHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLA--DVDCVKFHPNSN 457
Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
L +GS D T+ LW+ + + S+ TGH+ + + FSP+G+ +ASA D+ +KLWD
Sbjct: 458 YLATGSTDKTVRLWSAQ-QGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 516
Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
G LRGH + + +S DS L+ S S D++++VW+++ G E+ V
Sbjct: 517 SGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGV 576
Score = 223 (83.6 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 43/138 (31%), Positives = 76/138 (55%)
Query: 434 SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK 493
SGS D T LW+ ++ L GH ++CV+F P+ +A+ S DK+++LW + G
Sbjct: 419 SGSHDRTARLWSFDRTYP-LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 477
Query: 494 FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA 553
+ GH V +A+S + + L S D LK+W++ + + ++L GH D + ++ ++
Sbjct: 478 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 537
Query: 554 PDGEKVASGGKDKVLRLW 571
PD +AS D +R+W
Sbjct: 538 PDSSLIASASMDNSVRVW 555
Score = 214 (80.4 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 64/224 (28%), Positives = 104/224 (46%)
Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
GH V S +F + L S S D ++R+WD+ + T +G Y + ++
Sbjct: 358 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVW----DL----- 408
Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
D+ P D + + + P+ R + GH V VKF PN LA+GS
Sbjct: 409 DISPYSLYFASGSHDRTARLWSFDRTYPL-RIYA---GHLADVDCVKFHPNSNYLATGST 464
Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
D TVR W + GH+ VL +A+SP+ K L S ++ + WD ++G + +
Sbjct: 465 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT-LYKE 523
Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC 331
+RGH IT+L++ P AS+ D ++R+WD+ + C
Sbjct: 524 LRGHTDNITSLTFSP-----DSSLIASASMDNSVRVWDIRNTYC 562
Score = 159 (61.0 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 38/140 (27%), Positives = 72/140 (51%)
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491
L+S S+D ++ W+ ++ GH + ++ SP AS S D++ +LW
Sbjct: 375 LLSCSEDMSIRYWDLGSFTNTVLYQ-GHAYPVWDLDISPYSLYFASGSHDRTARLWSFDR 433
Query: 492 GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVD 551
+ GH+ V V + +S L +GS D T+++W+ + + GH V ++
Sbjct: 434 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLA 493
Query: 552 WAPDGEKVASGGKDKVLRLW 571
++P+G+ +AS G+D+ L+LW
Sbjct: 494 FSPNGKYLASAGEDQRLKLW 513
Score = 141 (54.7 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 37/118 (31%), Positives = 56/118 (47%)
Query: 456 MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL--RGHVQAVYMVAWSSD 513
+ GH + F D + S S D SI+ WD +G F T+ +GH V+ + S
Sbjct: 356 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD--LGSFTNTVLYQGHAYPVWDLDISPY 413
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
S SGS D T ++W+ + GH +V V + P+ +A+G DK +RLW
Sbjct: 414 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLW 471
Score = 139 (54.0 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 58/225 (25%), Positives = 91/225 (40%)
Query: 314 SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVM 372
S +D +IR WD+ + H V + L + S S DRT ++W
Sbjct: 377 SCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYP 436
Query: 373 CRTLEGHAHWVNTLAL--STDYLMRVEATSTGG-FKYDPANPEE--SSKHALAKYQAQCP 427
R GH V+ + +++YL T + N + A P
Sbjct: 437 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSP 496
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKSLAR-MTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
G+ L S +D L LW + +L + + GH I + FSPD +IASAS D S+++
Sbjct: 497 NGKYLASAGEDQRLKLW--DLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRV 554
Query: 487 WD-----------GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSG 520
WD G G+ + G + V V + + + LLV+G
Sbjct: 555 WDIRNTYCSTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTG 599
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 39/145 (26%), Positives = 66/145 (45%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
P+ + L +G D+ + LW+ +K + HQ ++ + + D I D+
Sbjct: 296 PDSKLLAAGFDNSCIKLWSLRSKK---LKSEPHQVDVSRIHLACD---ILEEEDDE---- 345
Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
D G + LRGH VY + +DS L+S S D +++ W++ + GH
Sbjct: 346 -DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYP 404
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
V+ +D +P ASG D+ RLW
Sbjct: 405 VWDLDISPYSLYFASGSHDRTARLW 429
Score = 55 (24.4 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 16/83 (19%), Positives = 39/83 (46%)
Query: 170 LPLDTLNTEEVVDIVYQK-QAVFQVRP--VTRCTSSMPGHAEAVISVKFSPNGRSLASGS 226
+P L E ++++ + + V P T C + + + + + SP+ + LA+G
Sbjct: 246 MPAPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGF 305
Query: 227 GDTTVRFWDVTTQTPLFKCEGHK 249
++ ++ W + ++ K E H+
Sbjct: 306 DNSCIKLWSLRSKK--LKSEPHQ 326
Score = 51 (23.0 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 13/73 (17%), Positives = 35/73 (47%)
Query: 73 LPLDTLNTEEVVDIVYQK-QAVFQVRP--VTRCTSSMPGHAEAVISVKFSPNGRSLASGS 129
+P L E ++++ + + V P T C + + + + + SP+ + LA+G
Sbjct: 246 MPAPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGF 305
Query: 130 GDTTVRFWDVTTQ 142
++ ++ W + ++
Sbjct: 306 DNSCIKLWSLRSK 318
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 227 (85.0 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 72/262 (27%), Positives = 116/262 (44%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
S+ GH V+SV S AS S D +R WD+ + + P +
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAW-------- 110
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
TLA L T V K +F V + S+ + ++S+ +SP+G+ LAS
Sbjct: 111 TLAFSPDSQYLATGTHVG----KVNIFGVESGKK-EYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
G+ D + +D+ T L EGH + + +SPDS+ LV+ +G I +D
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA 225
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
G + GH W+ +++ P H F SS D ++++WDV CV H V
Sbjct: 226 GT-LSGHASWVLNVAFCPDD-TH----FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWG 279
Query: 345 IRWGGSGL-IYSASQDRTIKVW 365
+++ G+G I S D+ I ++
Sbjct: 280 VKYNGNGSKIVSVGDDQEIHIY 301
Score = 224 (83.9 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 63/222 (28%), Positives = 106/222 (47%)
Query: 355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD--PANPE 412
S+S D I++W +G ++++ TLA S D T G + +
Sbjct: 81 SSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK 140
Query: 413 ESSKHALAKYQ---AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFS 469
E S K+ A P+G+ L SG+ D + +++ K L + GH I + FS
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL-LHTLEGHAMPIRSLTFS 199
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
PD +++ +AS D IK++D + TL GH V VA+ D VS S+D ++KVW
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 530 NMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
++ T+ H D+V+ V + +G K+ S G D+ + ++
Sbjct: 260 DVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 46/144 (31%), Positives = 80/144 (55%)
Query: 430 EKLVSGSDDFTLFLWNPEKEKKSLA-RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
E +V+GS D + +W EK L + GHQ + V+ S I AS+S D I+LWD
Sbjct: 33 ETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 92
Query: 489 GRIGKFITTL-RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
GK I ++ G V A + +A+S DS+ L +G+ + ++ +++ K E L G +
Sbjct: 93 LENGKQIKSIDAGPVDA-WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFI 151
Query: 548 YAVDWAPDGEKVASGGKDKVLRLW 571
++ ++PDG+ +ASG D ++ ++
Sbjct: 152 LSIAYSPDGKYLASGAIDGIINIF 175
Score = 170 (64.9 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 77/296 (26%), Positives = 127/296 (42%)
Query: 206 HAEAVISVKFSPNGR----SLASGSGDTTVRFWDVTTQT-PL-FKCEGHKHWVLCIAWSP 259
H +A+ SV + N + ++ +GS D V+ W + L + EGH+ V+ + S
Sbjct: 15 HDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISH 74
Query: 260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQ-WITALSWEPFHLNHQCRRFASSGKD 318
S + I WD GKQI G W A S + +L A+
Sbjct: 75 TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL-------ATGTHV 127
Query: 319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLE 377
G + I+ V + L + + + I + G + S + D I ++ + G + TLE
Sbjct: 128 GKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE 187
Query: 378 GHAHWVNTLALSTDYLMRVEATSTGGFK-YDP--ANPEES-SKHALAKYQ-AQCPEGEKL 432
GHA + +L S D + V A+ G K YD AN + S HA A CP+
Sbjct: 188 GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF 247
Query: 433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
VS S D ++ +W+ + + HQ + V+++ +G I S D+ I ++D
Sbjct: 248 VSSSSDKSVKVWDVGT-RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 160 (61.4 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 61/301 (20%), Positives = 128/301 (42%)
Query: 242 LFKCE-GHKHWVLCIAWSPDSKQ----LVSGCKNGVIHAWDSSTGK-QIGQPMRGHKQWI 295
LFK E H + +AW + K+ +V+G + ++ W K + + GH+ +
Sbjct: 8 LFKQEQAHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGV 67
Query: 296 TALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIY 354
++ ++H ASS D IR+WD+ + ++ + + + + S +
Sbjct: 68 VSVD-----ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLA 122
Query: 355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE- 412
+ + + ++ G +L+ ++ ++A S D G +D A +
Sbjct: 123 TGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 413 --ESSKHALA-KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFS 469
HA+ + P+ + LV+ SDD + +++ + + ++GH + V F
Sbjct: 183 LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA-GTLSGHASWVLNVAFC 241
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
PD S+S DKS+K+WD + T H V+ V ++ + +VS D + ++
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Query: 530 N 530
+
Sbjct: 302 D 302
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/124 (26%), Positives = 54/124 (43%)
Query: 202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
++ GHA + S+ FSP+ + L + S D ++ +DV GH WVL +A+ PD
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
VS + + WD T + H+ + + + N + S G D I
Sbjct: 245 THFVSSSSDKSVKVWDVGTRTCV-HTFFDHQDQVWGVKY-----NGNGSKIVSVGDDQEI 298
Query: 322 RIWD 325
I+D
Sbjct: 299 HIYD 302
WARNING: HSPs involving 1626 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 573 573 0.00080 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1876
No. of states in DFA: 624 (66 KB)
Total size of DFA: 358 KB (2173 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 51.01u 0.08s 51.09t Elapsed: 00:00:35
Total cpu time: 51.38u 0.08s 51.46t Elapsed: 00:00:35
Start: Thu Aug 15 13:15:58 2013 End: Thu Aug 15 13:16:33 2013
WARNINGS ISSUED: 2