BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2674
(183 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 2/149 (1%)
Query: 15 PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
P+ +L+A + D A +F RE +L L H H+VK G+C +GDP ++ EY
Sbjct: 39 PEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMK 98
Query: 75 WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
GDL +FL A P L+ SQ + +A Q+A G+ +++ + +H+D+A
Sbjct: 99 HGDLNKFLRAHGPDAVLMAEGNPP--TELTQSQMLHIAQQIAAGMVYLASQHFVHRDLAT 156
Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYK 163
RNCL+ +L VKI G+S+D Y +YY+
Sbjct: 157 RNCLVGENLLVKIGDFGMSRDVYSTDYYR 185
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Query: 15 PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
P +L+A + A +F+RE +L L H H+VK G+C DGDP ++ EY
Sbjct: 41 PTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMK 100
Query: 75 WGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
GDL +FL A + + L SQ + +A Q+A G+ +++ + +H+D+A
Sbjct: 101 HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLA 160
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
RNCL+ ++L VKI G+S+D Y +YY+
Sbjct: 161 TRNCLVGANLLVKIGDFGMSRDVYSTDYYR 190
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 23/172 (13%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
A GL +P +++ K L + +F+RE L + D+ ++VK++G+C G P
Sbjct: 68 APGLLPYEP--FTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125
Query: 67 YLLLEYTDWGDLKQFL---------------LATRXXXXXXXXXXXPRVRSLSTSQAVTM 111
LL EY +GDL +FL L+TR P LS ++ + +
Sbjct: 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS------PGPPPLSCAEQLCI 179
Query: 112 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
A QVA G+ ++S+++ +H+D+A RNCL+ ++ VKI+ GLS++ Y +YYK
Sbjct: 180 ARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%)
Query: 15 PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
P+ +L+A + + A +F+RE +L L H H+V+ G+C +G P ++ EY
Sbjct: 67 PEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMR 126
Query: 75 WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
GDL +FL + L Q + +A QVA G+ +++ +H+D+A
Sbjct: 127 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLAT 186
Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYK 163
RNCL+ L VKI G+S+D Y +YY+
Sbjct: 187 RNCLVGQGLVVKIGDFGMSRDIYSTDYYR 215
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%)
Query: 15 PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
P+ +L+A + + A +F+RE +L L H H+V+ G+C +G P ++ EY
Sbjct: 38 PEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMR 97
Query: 75 WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
GDL +FL + L Q + +A QVA G+ +++ +H+D+A
Sbjct: 98 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLAT 157
Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYK 163
RNCL+ L VKI G+S+D Y +YY+
Sbjct: 158 RNCLVGQGLVVKIGDFGMSRDIYSTDYYR 186
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%)
Query: 15 PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
P+ +L+A + + A +F+RE +L L H H+V+ G+C +G P ++ EY
Sbjct: 44 PEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMR 103
Query: 75 WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
GDL +FL + L Q + +A QVA G+ +++ +H+D+A
Sbjct: 104 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLAT 163
Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYK 163
RNCL+ L VKI G+S+D Y +YY+
Sbjct: 164 RNCLVGQGLVVKIGDFGMSRDIYSTDYYR 192
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
A+G+ +P+ + K++ + EF E + + + HVV+++G+ G P
Sbjct: 39 AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 96
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
+++E GDLK +L + R P S S+ + MA ++A G+ +++ +
Sbjct: 97 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 151
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
+H+D+AARNC+++ D +VKI G+++D Y+ +YY+ RW+ ++ +G
Sbjct: 152 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 208
Query: 179 NVFKT 183
VF T
Sbjct: 209 -VFTT 212
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 17/155 (10%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
EF E + + + HVV+++G+ G P +++E GDLK +L + R
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 97 XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
P S S+ + MA ++A G+ +++ + +H+D+AARNC+++ D +VKI G+++D
Sbjct: 134 PP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 157 YQKEYYK--------YRWVICSNIAEGRRLNVFKT 183
Y+ +YY+ RW+ ++ +G VF T
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDG----VFTT 219
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
A+G+ +P+ + K++ + EF E + + + HVV+++G+ G P
Sbjct: 68 AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 125
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
+++E GDLK +L + R P S S+ + MA ++A G+ +++ +
Sbjct: 126 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 180
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
+H+D+AARNC+++ D +VKI G+++D Y+ +YY+ RW+ ++ +G
Sbjct: 181 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 237
Query: 179 NVFKT 183
VF T
Sbjct: 238 -VFTT 241
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
A+G+ +P+ + K++ + EF E + + + HVV+++G+ G P
Sbjct: 36 AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 93
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
+++E GDLK +L + R P S S+ + MA ++A G+ +++ +
Sbjct: 94 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 148
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
+H+D+AARNC+++ D +VKI G+++D Y+ +YY+ RW+ ++ +G
Sbjct: 149 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 205
Query: 179 NVFKT 183
VF T
Sbjct: 206 -VFTT 209
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
A+G+ +P+ + K++ + EF E + + + HVV+++G+ G P
Sbjct: 37 AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 94
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
+++E GDLK +L + R P S S+ + MA ++A G+ +++ +
Sbjct: 95 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 149
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
+H+D+AARNC+++ D +VKI G+++D Y+ +YY+ RW+ ++ +G
Sbjct: 150 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 206
Query: 179 NVFKT 183
VF T
Sbjct: 207 -VFTT 210
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
A+G+ +P+ + K++ + EF E + + + HVV+++G+ G P
Sbjct: 39 AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 96
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
+++E GDLK +L + R P S S+ + MA ++A G+ +++ +
Sbjct: 97 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 151
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
+H+D+AARNC+++ D +VKI G+++D Y+ +YY+ RW+ ++ +G
Sbjct: 152 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 208
Query: 179 NVFKT 183
VF T
Sbjct: 209 -VFTT 212
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
A+G+ +P+ + K++ + EF E + + + HVV+++G+ G P
Sbjct: 33 AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 90
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
+++E GDLK +L + R P S S+ + MA ++A G+ +++ +
Sbjct: 91 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 145
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
+H+D+AARNC+++ D +VKI G+++D Y+ +YY+ RW+ ++ +G
Sbjct: 146 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 202
Query: 179 NVFKT 183
VF T
Sbjct: 203 -VFTT 206
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 17/155 (10%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
EF E + + + HVV+++G+ G P +++E GDLK +L + R
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 97 XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
P S S+ + MA ++A G+ +++ + +H+D+AARNC+++ D +VKI G+++D
Sbjct: 134 PP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 157 YQKEYYK--------YRWVICSNIAEGRRLNVFKT 183
Y+ +YY+ RW+ ++ +G VF T
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDG----VFTT 219
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
A+G+ +P+ + K++ + EF E + + + HVV+++G+ G P
Sbjct: 40 AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 97
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
+++E GDLK +L + R P S S+ + MA ++A G+ +++ +
Sbjct: 98 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 152
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
+H+D+AARNC+++ D +VKI G+++D Y+ +YY+ RW+ ++ +G
Sbjct: 153 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 209
Query: 179 NVFKT 183
VF T
Sbjct: 210 -VFTT 213
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
A+G+ +P+ + K++ + EF E + + + HVV+++G+ G P
Sbjct: 33 AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 90
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
+++E GDLK +L + R P S S+ + MA ++A G+ +++ +
Sbjct: 91 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 145
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
+H+D+AARNC ++ D +VKI G+++D Y+ +YY+ RW+ ++ +G
Sbjct: 146 FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 202
Query: 179 NVFKT 183
VF T
Sbjct: 203 -VFTT 206
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 82/155 (52%), Gaps = 17/155 (10%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
EF E + HVV+++G+ G P +++E GDLK +L + R
Sbjct: 65 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 124
Query: 97 XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
P ++ + + MA ++A G+ +++ K+ +H+D+AARNC+++ D +VKI G+++D
Sbjct: 125 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 179
Query: 157 YQKEYYK--------YRWVICSNIAEGRRLNVFKT 183
Y+ +YY+ RW+ ++ +G VF T
Sbjct: 180 YETDYYRKGGKGLLPVRWMAPESLKDG----VFTT 210
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 83/156 (53%), Gaps = 9/156 (5%)
Query: 19 SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
+ + K L + L + E ++ +++H HV+K+ G C P L++EY +G L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 79 KQFLLATRXXXXXXXXXXX---------PRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
+ FL +R P R+L+ ++ A+Q++ G++++++ +L+H
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH 173
Query: 130 KDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 165
+D+AARN L++ +KIS GLS+D Y+++ Y R
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR 209
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 82/155 (52%), Gaps = 17/155 (10%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
EF E + HVV+++G+ G P +++E GDLK +L + R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 97 XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
P ++ + + MA ++A G+ +++ K+ +H+D+AARNC+++ D +VKI G+++D
Sbjct: 126 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 157 YQKEYYK--------YRWVICSNIAEGRRLNVFKT 183
Y+ +YY+ RW+ ++ +G VF T
Sbjct: 181 YETDYYRKGGKGLLPVRWMAPESLKDG----VFTT 211
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 81/155 (52%), Gaps = 17/155 (10%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
EF E + HVV+++G+ G P +++E GDLK +L + R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 97 XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
P ++ + + MA ++A G+ +++ K+ +H+D+AARNC+++ D +VKI G+++D
Sbjct: 126 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 157 YQKEYYK--------YRWVICSNIAEGRRLNVFKT 183
Y+ YY+ RW+ ++ +G VF T
Sbjct: 181 YETAYYRKGGKGLLPVRWMAPESLKDG----VFTT 211
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A GL P + + K L ++ L + E+++ + H +++ ++G C
Sbjct: 37 VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 96
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX--PRVRSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R P LS+ V+ AYQVA G+
Sbjct: 97 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGM 155
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ K+ IH+D+AARN L++ D +KI+ GL++D + +YYK
Sbjct: 156 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A GL P + + K L ++ L + E+++ + H +++ ++G C
Sbjct: 45 VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 104
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX--PRVRSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R P LS+ V+ AYQVA G+
Sbjct: 105 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGM 163
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ K+ IH+D+AARN L++ D +KI+ GL++D + +YYK
Sbjct: 164 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A GL P + + K L ++ L + E+++ + H +++ ++G C
Sbjct: 86 VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX--PRVRSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R P LS+ V+ AYQVA G+
Sbjct: 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGM 204
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ K+ IH+D+AARN L++ D +KI+ GL++D + +YYK
Sbjct: 205 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A GL P + + K L ++ L + E+++ + H +++ ++G C
Sbjct: 38 VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 97
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX--PRVRSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R P LS+ V+ AYQVA G+
Sbjct: 98 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGM 156
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ K+ IH+D+AARN L++ D +KI+ GL++D + +YYK
Sbjct: 157 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A GL P + + K L ++ L + E+++ + H +++ ++G C
Sbjct: 30 VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 89
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXX--XXXXXPRVRSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R P LS+ V+ AYQVA G+
Sbjct: 90 QDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE-EQLSSKDLVSCAYQVARGM 148
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ K+ IH+D+AARN L++ D +KI+ GL++D + +YYK
Sbjct: 149 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A GL P + + K L ++ L + E+++ + H +++ ++G C
Sbjct: 34 VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 93
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX--PRVRSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R P LS+ V+ AYQVA G+
Sbjct: 94 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGM 152
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ K+ IH+D+AARN L++ D +KI+ GL++D + +YYK
Sbjct: 153 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A GL P + + K L ++ L + E+++ + H +++ ++G C
Sbjct: 45 VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 104
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXX--XXXXXPRVRSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R P LS+ V+ AYQVA G+
Sbjct: 105 QDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE-EQLSSKDLVSCAYQVARGM 163
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ K+ IH+D+AARN L++ D +KI+ GL++D + +YYK
Sbjct: 164 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 82/155 (52%), Gaps = 17/155 (10%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
EF E + HVV+++G+ G P +++E GDLK +L + R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 97 XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
P ++ + + MA ++A G+ +++ K+ +H+++AARNC+++ D +VKI G+++D
Sbjct: 126 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 157 YQKEYYK--------YRWVICSNIAEGRRLNVFKT 183
Y+ +YY+ RW+ ++ +G VF T
Sbjct: 181 YETDYYRKGGKGLLPVRWMAPESLKDG----VFTT 211
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 82/155 (52%), Gaps = 17/155 (10%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
EF E + HVV+++G+ G P +++E GDLK +L + R
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 97 XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
P ++ + + MA ++A G+ +++ K+ +H+++AARNC+++ D +VKI G+++D
Sbjct: 127 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI 181
Query: 157 YQKEYYK--------YRWVICSNIAEGRRLNVFKT 183
Y+ +YY+ RW+ ++ +G VF T
Sbjct: 182 YETDYYRKGGKGLLPVRWMAPESLKDG----VFTT 212
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 81/151 (53%), Gaps = 9/151 (5%)
Query: 19 SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
+ + K L + L + E ++ +++H HV+K+ G C P L++EY +G L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 79 KQFLLATRXXXXXXXXXXX---------PRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
+ FL +R P R+L+ ++ A+Q++ G++++++ +L+H
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH 173
Query: 130 KDIAARNCLISSDLSVKISLSGLSKDTYQKE 160
+D+AARN L++ +KIS GLS+D Y+++
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEED 204
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 19 SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
+ + K L + L + E ++ +++H HV+K+ G C P L++EY +G L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 79 KQFLLATRXXXXXXXXXXX---------PRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
+ FL +R P R+L+ ++ A+Q++ G++++++ L+H
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVH 173
Query: 130 KDIAARNCLISSDLSVKISLSGLSKDTYQKE 160
+D+AARN L++ +KIS GLS+D Y+++
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEED 204
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A GL P + + K L ++ L + E+++ + H +++ ++G C
Sbjct: 45 VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 104
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX--PRVRSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A P LS+ V+ AYQVA G+
Sbjct: 105 QDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGM 163
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ K+ IH+D+AARN L++ D +KI+ GL++D + +YYK
Sbjct: 164 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 79/141 (56%), Gaps = 17/141 (12%)
Query: 24 KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQF 81
KSL + + + F RE L L+H +V+ +IGI +G PH +LL Y GDL QF
Sbjct: 55 KSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH-VLLPYMCHGDLLQF 113
Query: 82 LLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
+ + + R+ + ++ QVA G+E++++++ +H+D+AARNC++
Sbjct: 114 IRSPQ--------------RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDE 159
Query: 142 DLSVKISLSGLSKDTYQKEYY 162
+VK++ GL++D +EYY
Sbjct: 160 SFTVKVADFGLARDILDREYY 180
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
A+G+ +P+ + K++ + EF E + + + HVV+++G+ G P
Sbjct: 31 AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 88
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
+++E GDLK +L + R P S S+ + MA ++A G+ +++ +
Sbjct: 89 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 143
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--------KEYYKYRWVICSNIAEGRRL 178
+H+D+AARNC+++ D +VKI G+++D + K RW+ ++ +G
Sbjct: 144 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDG--- 200
Query: 179 NVFKT 183
VF T
Sbjct: 201 -VFTT 204
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
A+G+ +P+ + K++ + EF E + + + HVV+++G+ G P
Sbjct: 40 AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 97
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
+++E GDLK +L + R P S S+ + MA ++A G+ +++ +
Sbjct: 98 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 152
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--------KEYYKYRWVICSNIAEGRRL 178
+H+D+AARNC+++ D +VKI G+++D + K RW+ ++ +G
Sbjct: 153 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDG--- 209
Query: 179 NVFKT 183
VF T
Sbjct: 210 -VFTT 213
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A GL P + + K L ++ L + E+++ + H +++ ++G C
Sbjct: 45 VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 104
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX--PRVRSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R P LS+ V+ AYQVA G+
Sbjct: 105 QDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPE-EQLSSKDLVSCAYQVARGM 163
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ K+ IH+D+AARN L++ D +KI+ GL++D + + K
Sbjct: 164 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 9/170 (5%)
Query: 16 QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
+ T + K+L + EF+ E L +L H +VV ++G+ P ++ Y
Sbjct: 54 EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH 113
Query: 76 GDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
GDL +FL+ V+S L V + Q+A G+E++S ++HKD+A
Sbjct: 114 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT 173
Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYKY--------RWVICSNIAEGR 176
RN L+ L+VKIS GL ++ Y +YYK RW+ I G+
Sbjct: 174 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGK 223
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A G+ P++ + K L +E L + E+++ + H +++ ++G C
Sbjct: 52 VMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACT 111
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R RV ++ V+ YQ+A G+
Sbjct: 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ ++ IH+D+AARN L++ + +KI+ GL++D +YYK
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 9/170 (5%)
Query: 16 QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
+ T + K+L + EF+ E L +L H +VV ++G+ P ++ Y
Sbjct: 37 EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH 96
Query: 76 GDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
GDL +FL+ V+S L V + Q+A G+E++S ++HKD+A
Sbjct: 97 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT 156
Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYKY--------RWVICSNIAEGR 176
RN L+ L+VKIS GL ++ Y +YYK RW+ I G+
Sbjct: 157 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGK 206
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
EF E + HVV+++G+ G P +++E GDLK +L + R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 97 XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
P ++ + + MA ++A G+ +++ K+ +H+D+AARNC+++ D +VKI G+++D
Sbjct: 126 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 157 YQ--------KEYYKYRWVICSNIAEGRRLNVFKT 183
+ K RW+ ++ +G VF T
Sbjct: 181 XETDXXRKGGKGLLPVRWMAPESLKDG----VFTT 211
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
EF E + HVV+++G+ G P +++E GDLK +L + R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 97 XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
P ++ + + MA ++A G+ +++ K+ +H+D+AARNC+++ D +VKI G+++D
Sbjct: 126 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 157 YQ--------KEYYKYRWVICSNIAEGRRLNVFKT 183
+ K RW+ ++ +G VF T
Sbjct: 181 XETDXXRKGGKGLLPVRWMAPESLKDG----VFTT 211
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A G+ P++ + K L ++ L + E+++ + H +++ ++G C
Sbjct: 44 VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 103
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R RV ++ V+ YQ+A G+
Sbjct: 104 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 162
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ ++ IH+D+AARN L++ + +KI+ GL++D +YYK
Sbjct: 163 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 206
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A G+ P++ + K L ++ L + E+++ + H +++ ++G C
Sbjct: 41 VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 100
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R RV ++ V+ YQ+A G+
Sbjct: 101 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 159
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ ++ IH+D+AARN L++ + +KI+ GL++D +YYK
Sbjct: 160 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 203
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A G+ P++ + K L ++ L + E+++ + H +++ ++G C
Sbjct: 52 VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R RV ++ V+ YQ+A G+
Sbjct: 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ ++ IH+D+AARN L++ + +KI+ GL++D +YYK
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDP 65
A G+ P++ + K L ++ L + E+++ + H +++ ++G C P
Sbjct: 102 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 161
Query: 66 HYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHIS 123
Y+++EY G+L+++L A R RV ++ V+ YQ+A G+E+++
Sbjct: 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLA 220
Query: 124 DKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
++ IH+D+AARN L++ + +KI+ GL++D +YYK
Sbjct: 221 SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15 PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
P++ ++ +A K+ + D +F +E + DH H+VK+IG+ + +P ++++E
Sbjct: 62 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 120
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G+L+ FL R SL + + AYQ++ L ++ KR +H+DIA
Sbjct: 121 TLGELRSFLQV--------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 166
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
ARN L+SS+ VK+ GLS+ YYK
Sbjct: 167 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 196
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
EF E + HVV+++G+ G P +++E GDLK +L + R
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 97 XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
P ++ + + MA ++A G+ +++ K+ +H+D+AARNC+++ D +VKI G+++D
Sbjct: 123 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 177
Query: 157 YQ--------KEYYKYRWVICSNIAEGRRLNVFKT 183
+ K RW+ ++ +G VF T
Sbjct: 178 XETDXXRKGGKGLLPVRWMAPESLKDG----VFTT 208
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15 PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
P++ ++ +A K+ + D +F +E + DH H+VK+IG+ + +P ++++E
Sbjct: 39 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 97
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G+L+ FL R SL + + AYQ++ L ++ KR +H+DIA
Sbjct: 98 TLGELRSFLQV--------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 143
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
ARN L+SS+ VK+ GLS+ YYK
Sbjct: 144 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 173
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15 PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
P++ ++ +A K+ + D +F +E + DH H+VK+IG+ + +P ++++E
Sbjct: 34 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 92
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G+L+ FL R SL + + AYQ++ L ++ KR +H+DIA
Sbjct: 93 TLGELRSFLQV--------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 138
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
ARN L+SS+ VK+ GLS+ YYK
Sbjct: 139 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 168
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15 PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
P++ ++ +A K+ + D +F +E + DH H+VK+IG+ + +P ++++E
Sbjct: 34 PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 92
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G+L+ FL R SL + + AYQ++ L ++ KR +H+DIA
Sbjct: 93 TLGELRSFLQV--------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 138
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
ARN L+SS+ VK+ GLS+ YYK
Sbjct: 139 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 168
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 17/163 (10%)
Query: 8 RGLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
G + P D S L K+L V+S+ DE +F E + K +H ++V+ IG+
Sbjct: 63 EGQVSGMPNDPSPLQVAVKTLPEVYSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQS 120
Query: 64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
P ++LLE GDLK FL TR + SL+ + +A +A G +++
Sbjct: 121 LPRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLE 172
Query: 124 DKRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
+ IH+DIAARNCL++ KI G+++D Y+ YY+
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15 PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
P++ ++ +A K+ + D +F +E + DH H+VK+IG+ + +P ++++E
Sbjct: 37 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 95
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G+L+ FL R SL + + AYQ++ L ++ KR +H+DIA
Sbjct: 96 TLGELRSFLQV--------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 141
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
ARN L+SS+ VK+ GLS+ YYK
Sbjct: 142 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 171
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A G+ P++ + K L ++ L + E+++ + H +++ ++G C
Sbjct: 52 VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACT 111
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R RV ++ V+ YQ+A G+
Sbjct: 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ ++ IH+D+AARN L++ + +KI+ GL++D +YYK
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15 PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
P++ ++ +A K+ + D +F +E + DH H+VK+IG+ + +P ++++E
Sbjct: 36 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 94
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G+L+ FL R SL + + AYQ++ L ++ KR +H+DIA
Sbjct: 95 TLGELRSFLQV--------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 140
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
ARN L+SS+ VK+ GLS+ YYK
Sbjct: 141 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 170
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15 PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
P++ ++ +A K+ + D +F +E + DH H+VK+IG+ + +P ++++E
Sbjct: 31 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 89
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G+L+ FL R SL + + AYQ++ L ++ KR +H+DIA
Sbjct: 90 TLGELRSFLQV--------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 135
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
ARN L+SS+ VK+ GLS+ YYK
Sbjct: 136 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 165
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A G+ P++ + K L ++ L + E+++ + H +++ ++G C
Sbjct: 52 VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACT 111
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R RV ++ V+ YQ+A G+
Sbjct: 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ ++ IH+D+AARN L++ + +KI+ GL++D +YYK
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 17/163 (10%)
Query: 8 RGLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
G + P D S L K+L V S+ DE +F E + KL+H ++V+ IG+
Sbjct: 63 EGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKLNHQNIVRCIGVSLQS 120
Query: 64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
P ++LLE GDLK FL TR + SL+ + +A +A G +++
Sbjct: 121 LPRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLE 172
Query: 124 DKRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
+ IH+DIAARNCL++ KI G+++D Y+ YY+
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 9 GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
G + P D S L K+L V S+ DE +F E + KL+H ++V+ IG+
Sbjct: 50 GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKLNHQNIVRCIGVSLQSL 107
Query: 65 PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
P ++LLE GDLK FL TR + SL+ + +A +A G +++ +
Sbjct: 108 PRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 159
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
IH+DIAARNCL++ KI G+++D Y+ YY+
Sbjct: 160 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A G+ P++ + K L ++ L + E+++ + H +++ ++G C
Sbjct: 52 VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R RV ++ V+ YQ+A G+
Sbjct: 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ ++ IH+D+AARN L++ + ++I+ GL++D +YYK
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 82 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 140
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G+++++ K+ +H+D+AARNC++
Sbjct: 141 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 186
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
+VK++ GL++D Y KEYY
Sbjct: 187 EKFTVKVADFGLARDMYDKEYY 208
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 18 TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC-------RDGDPHYLLL 70
+V M K+ + + D + EF RE + DH HV K++G+ R P ++L
Sbjct: 54 VAVKMLKADIIASSD--IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP-MVIL 110
Query: 71 EYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
+ GDL FLLA+R +L V +A G+E++S + IH+
Sbjct: 111 PFMKHGDLHAFLLASRIGENPF---------NLPLQTLVRFMVDIACGMEYLSSRNFIHR 161
Query: 131 DIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
D+AARNC+++ D++V ++ GLS+ Y +YY+
Sbjct: 162 DLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR 194
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 81 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 139
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G+++++ K+ +H+D+AARNC++
Sbjct: 140 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 185
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
+VK++ GL++D Y KEYY
Sbjct: 186 EKFTVKVADFGLARDMYDKEYY 207
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 121
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G+++++ K+ +H+D+AARNC++
Sbjct: 122 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 167
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
+VK++ GL++D Y KEYY
Sbjct: 168 EKFTVKVADFGLARDMYDKEYY 189
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15 PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
P++ ++ +A K+ + D +F +E + DH H+VK+IG+ + +P ++++E
Sbjct: 414 PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 472
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G+L+ FL R SL + + AYQ++ L ++ KR +H+DIA
Sbjct: 473 TLGELRSFLQV--------------RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIA 518
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
ARN L+SS+ VK+ GLS+ YYK
Sbjct: 519 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 548
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 55 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 113
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G+++++ K+ +H+D+AARNC++
Sbjct: 114 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 159
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
+VK++ GL++D Y KEYY
Sbjct: 160 EKFTVKVADFGLARDMYDKEYY 181
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 62 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 120
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G+++++ K+ +H+D+AARNC++
Sbjct: 121 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 166
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
+VK++ GL++D Y KEYY
Sbjct: 167 EKFTVKVADFGLARDMYDKEYY 188
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 60 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 118
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G+++++ K+ +H+D+AARNC++
Sbjct: 119 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 164
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
+VK++ GL++D Y KEYY
Sbjct: 165 EKFTVKVADFGLARDMYDKEYY 186
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 121
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G+++++ K+ +H+D+AARNC++
Sbjct: 122 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 167
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
+VK++ GL++D Y KEYY
Sbjct: 168 EKFTVKVADFGLARDMYDKEYY 189
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 61 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 119
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G+++++ K+ +H+D+AARNC++
Sbjct: 120 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 165
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
+VK++ GL++D Y KEYY
Sbjct: 166 EKFTVKVADFGLARDMYDKEYY 187
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 58 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 116
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G+++++ K+ +H+D+AARNC++
Sbjct: 117 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 162
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
+VK++ GL++D Y KEYY
Sbjct: 163 EKFTVKVADFGLARDMYDKEYY 184
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A G+ P++ + K L ++ L + E+++ + H +++ ++G C
Sbjct: 39 VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 98
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R RV ++ V+ YQ+A G+
Sbjct: 99 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 157
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ ++ IH+D+ ARN L++ + +KI+ GL++D +YYK
Sbjct: 158 EYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYK 201
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 9 GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
G + P D S L K+L V S+ DE +F E + K +H ++V+ IG+
Sbjct: 41 GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQSL 98
Query: 65 PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
P ++LLE GDLK FL TR + SL+ + +A +A G +++ +
Sbjct: 99 PRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 150
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
IH+DIAARNCL++ KI G+++D Y+ YY+
Sbjct: 151 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 192
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 9 GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
G + P D S L K+L V S+ DE +F E + K +H ++V+ IG+
Sbjct: 49 GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQSL 106
Query: 65 PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
P ++LLE GDLK FL TR + SL+ + +A +A G +++ +
Sbjct: 107 PRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 158
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
IH+DIAARNCL++ KI G+++D Y+ YY+
Sbjct: 159 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 9 GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
G + P D S L K+L V S+ DE +F E + K +H ++V+ IG+
Sbjct: 50 GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQSL 107
Query: 65 PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
P ++LLE GDLK FL TR + SL+ + +A +A G +++ +
Sbjct: 108 PRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 159
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
IH+DIAARNCL++ KI G+++D Y+ YY+
Sbjct: 160 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 9 GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
G + P D S L K+L V S+ DE +F E + K +H ++V+ IG+
Sbjct: 66 GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQSL 123
Query: 65 PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
P ++LLE GDLK FL TR + SL+ + +A +A G +++ +
Sbjct: 124 PRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 175
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
IH+DIAARNCL++ KI G+++D Y+ YY+
Sbjct: 176 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 217
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 9 GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
G + P D S L K+L V S+ DE +F E + K +H ++V+ IG+
Sbjct: 56 GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQSL 113
Query: 65 PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
P ++LLE GDLK FL TR + SL+ + +A +A G +++ +
Sbjct: 114 PRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 165
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
IH+DIAARNCL++ KI G+++D Y+ YY+
Sbjct: 166 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 207
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 9 GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
G + P D S L K+L V S+ DE +F E + K +H ++V+ IG+
Sbjct: 76 GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQSL 133
Query: 65 PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
P ++LLE GDLK FL TR + SL+ + +A +A G +++ +
Sbjct: 134 PRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 185
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
IH+DIAARNCL++ KI G+++D Y+ YY+
Sbjct: 186 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 227
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 8 RGLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
G + P D S L K+L V S+ DE +F E + K +H ++V+ IG+
Sbjct: 49 EGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQS 106
Query: 64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
P ++LLE GDLK FL TR + SL+ + +A +A G +++
Sbjct: 107 LPRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLE 158
Query: 124 DKRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
+ IH+DIAARNCL++ KI G+++D Y+ YY+
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYR 201
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 15 PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
P++ ++ +A K+ + D +F +E + DH H+VK+IG+ + +P ++++E
Sbjct: 34 PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 92
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G+L+ FL R SL + + AYQ++ L ++ KR +H+DIA
Sbjct: 93 TLGELRSFLQV--------------RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIA 138
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
ARN L+S+ VK+ GLS+ YYK
Sbjct: 139 ARNVLVSATDCVKLGDFGLSRYMEDSTYYK 168
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A G+ P++ + K L ++ L + E+++ + H +++ ++G C
Sbjct: 52 VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
P Y+++ Y G+L+++L A R RV ++ V+ YQ+A G+
Sbjct: 112 QDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ ++ IH+D+AARN L++ + +KI+ GL++D +YYK
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 8 RGLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
G + P D S L K+L V S+ DE +F E + K +H ++V+ IG+
Sbjct: 66 EGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQS 123
Query: 64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
P ++LLE GDLK FL TR + SL+ + +A +A G +++
Sbjct: 124 LPRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLE 175
Query: 124 DKRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
+ IH+DIAARNCL++ KI G+++D Y+ YY+
Sbjct: 176 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 218
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 8 RGLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
G + P D S L K+L V S+ DE +F E + K +H ++V+ IG+
Sbjct: 89 EGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQS 146
Query: 64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
P ++LLE GDLK FL TR + SL+ + +A +A G +++
Sbjct: 147 LPRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLE 198
Query: 124 DKRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
+ IH+DIAARNCL++ KI G+++D Y+ YY+
Sbjct: 199 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 241
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 9 GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
G + P D S L K+L V S+ DE +F E + K +H ++V+ IG+
Sbjct: 49 GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQSL 106
Query: 65 PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
P ++L+E GDLK FL TR + SL+ + +A +A G +++ +
Sbjct: 107 PRFILMELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 158
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
IH+DIAARNCL++ KI G+++D Y+ YY+
Sbjct: 159 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A G+ P++ + K L ++ L + E+++ + H +++ ++G C
Sbjct: 52 VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
P Y+++ Y G+L+++L A R RV ++ V+ YQ+A G+
Sbjct: 112 QDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
E+++ ++ IH+D+AARN L++ + +KI+ GL++D +YYK
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 8 RGLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
G + P D S L K+L V S+ DE +F E + K +H ++V+ IG+
Sbjct: 63 EGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQS 120
Query: 64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
P ++L+E GDLK FL TR + SL+ + +A +A G +++
Sbjct: 121 LPRFILMELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLE 172
Query: 124 DKRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
+ IH+DIAARNCL++ KI G+++D Y+ YY+
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 87/178 (48%), Gaps = 22/178 (12%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD----GDP 65
LK D V + + + + EF E H +V++++G+C + G P
Sbjct: 55 LKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIP 114
Query: 66 H-YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
++L + +GDL +LL +R P+ L T + +ALG+E++S+
Sbjct: 115 KPMVILPFMKYGDLHTYLLYSRLETG-------PKHIPLQT--LLKFMVDIALGMEYLSN 165
Query: 125 KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAE 174
+ +H+D+AARNC++ D++V ++ GLSK Y +YY+ +W+ ++A+
Sbjct: 166 RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD 223
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 15 PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
P++ ++ +A K+ + D +F +E + DH H+VK+IG+ + +P ++++E
Sbjct: 414 PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 472
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G+L+ FL R SL + + AYQ++ L ++ KR +H+DIA
Sbjct: 473 TLGELRSFLQV--------------RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIA 518
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
ARN L+S+ VK+ GLS+ YYK
Sbjct: 519 ARNVLVSATDCVKLGDFGLSRYMEDSTYYK 548
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 29 SKDDEALHEFKREIDLFCKLDH-AHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRX 87
SKDD +F E+++ CKL H +++ ++G C YL +EY G+L FL +R
Sbjct: 55 SKDDH--RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 112
Query: 88 XXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
S LS+ Q + A VA G++++S K+ IH+D+AARN L+ + K
Sbjct: 113 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 172
Query: 147 ISLSGLSK 154
I+ GLS+
Sbjct: 173 IADFGLSR 180
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 29 SKDDEALHEFKREIDLFCKLDH-AHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRX 87
SKDD +F E+++ CKL H +++ ++G C YL +EY G+L FL +R
Sbjct: 65 SKDDH--RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 122
Query: 88 XXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
S LS+ Q + A VA G++++S K+ IH+D+AARN L+ + K
Sbjct: 123 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 182
Query: 147 ISLSGLSK 154
I+ GLS+
Sbjct: 183 IADFGLSR 190
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 16/141 (11%)
Query: 15 PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
P++ ++ +A K+ + D +F +E + DH H+VK+IG+ + +P ++++E
Sbjct: 34 PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 92
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G+L+ FL R SL + + AYQ++ L ++ KR +H+DIA
Sbjct: 93 TLGELRSFLQV--------------RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIA 138
Query: 134 ARNCLISSDLSVKISLSGLSK 154
ARN L+SS+ VK+ GLS+
Sbjct: 139 ARNVLVSSNDCVKLGDFGLSR 159
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 19/145 (13%)
Query: 17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
D +V M K S+D EF +E KL H +VK G+C P Y++ EY G
Sbjct: 34 DVAVKMIKEGSMSED-----EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNG 88
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
L +L + + L SQ + M Y V G+ + + IH+D+AARN
Sbjct: 89 CLLNYLRS--------------HGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARN 134
Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
CL+ DL VK+S G+++ +Y
Sbjct: 135 CLVDRDLCVKVSDFGMTRYVLDDQY 159
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 85/156 (54%), Gaps = 4/156 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A G+ P++ + K L ++ L + E+++ + H +++ ++G C
Sbjct: 52 VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R RV ++ V+ YQ+A G+
Sbjct: 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
E+++ ++ IH+D+AARN L++ + +KI+ GL++D
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
++ A G+ P++ + K L ++ L + E+++ + H +++ ++G C
Sbjct: 52 VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111
Query: 62 DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
P Y+++EY G+L+++L A R RV ++ V+ YQ+A G+
Sbjct: 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
E+++ ++ IH+D+AARN L++ + +KI+ GL++D
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 29 SKDDEALHEFKREIDLFCKLDH-AHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRX 87
SKDD +F E+++ CKL H +++ ++G C YL +EY G+L FL +R
Sbjct: 62 SKDDH--RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 119
Query: 88 XXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
S LS+ Q + A VA G++++S K+ IH+++AARN L+ + K
Sbjct: 120 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAK 179
Query: 147 ISLSGLSK 154
I+ GLS+
Sbjct: 180 IADFGLSR 187
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 122 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 180
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G++ ++ K+ +H+D+AARNC++
Sbjct: 181 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 226
Query: 141 SDLSVKISLSGLSKDTYQKEY 161
+VK++ GL++D Y KE+
Sbjct: 227 EKFTVKVADFGLARDMYDKEF 247
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 21/156 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 33 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 91
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++EY +G L+ +L + R+ + Q + Q+ G+E++ KR I
Sbjct: 92 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 137
Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYK 163
H+++A RN L+ ++ VKI GL+K Q KEYYK
Sbjct: 138 HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYK 173
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 121
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G++ ++ K+ +H+D+AARNC++
Sbjct: 122 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 167
Query: 141 SDLSVKISLSGLSKDTYQKEY 161
+VK++ GL++D Y KE+
Sbjct: 168 EKFTVKVADFGLARDMYDKEF 188
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 121
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G++ ++ K+ +H+D+AARNC++
Sbjct: 122 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 167
Query: 141 SDLSVKISLSGLSKDTYQKEY 161
+VK++ GL++D Y KE+
Sbjct: 168 EKFTVKVADFGLARDMYDKEF 188
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 61 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 119
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G++ ++ K+ +H+D+AARNC++
Sbjct: 120 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 165
Query: 141 SDLSVKISLSGLSKDTYQKEY 161
+VK++ GL++D Y KE+
Sbjct: 166 EKFTVKVADFGLARDMYDKEF 186
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 68 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 126
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G++ ++ K+ +H+D+AARNC++
Sbjct: 127 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 172
Query: 141 SDLSVKISLSGLSKDTYQKEY 161
+VK++ GL++D Y KE+
Sbjct: 173 EKFTVKVADFGLARDMYDKEF 193
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 64 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 122
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G++ ++ K+ +H+D+AARNC++
Sbjct: 123 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 168
Query: 141 SDLSVKISLSGLSKDTYQKEY 161
+VK++ GL++D Y KE+
Sbjct: 169 EKFTVKVADFGLARDMYDKEF 189
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y+++E+ +G+L +L
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-- 105
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ +S + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 106 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 155 FGLSRLMTGDTY 166
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y+++E+ +G+L +L
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-- 105
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ +S + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 106 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 155 FGLSRLMTGDTY 166
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 17/140 (12%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 62 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 120
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G+++++ K+ +H+D+AARNC++
Sbjct: 121 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 166
Query: 141 SDLSVKISLSGLSKDTYQKE 160
+VK++ GL++D Y KE
Sbjct: 167 EKFTVKVADFGLARDMYDKE 186
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 69.7 bits (169), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y+++E+ +G+L +L
Sbjct: 53 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-- 110
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ ++ + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 111 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 160 FGLSRLMTGDTY 171
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 69.7 bits (169), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 32 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++EY +G L+ +L + R+ + Q + Q+ G+E++ KR I
Sbjct: 91 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 136
Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYR 165
H+D+A RN L+ ++ VKI GL+K Q KE++K +
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVK 174
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y+++E+ +G+L +L
Sbjct: 46 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-- 103
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ +S + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 104 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 152
Query: 150 SGLSK 154
GLS+
Sbjct: 153 FGLSR 157
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 105
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ +S + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 106 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 155 FGLSRLMTGDTY 166
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 105
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ +S + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 106 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 155 FGLSRLMTGDTY 166
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 53 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 110
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ +S + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 111 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 160 FGLSRLMTGDTY 171
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ EY +G+L +L
Sbjct: 67 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNR-- 124
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
++ + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 125 -----------EEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVAD 173
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 174 FGLSRLMTGDTY 185
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 105
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ ++ + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 106 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 155 FGLSRLMTGDTY 166
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 53 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 110
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ ++ + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 111 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 160 FGLSRLMTGDTY 171
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y+++E+ +G+L +L
Sbjct: 49 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-- 106
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ ++ + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 107 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 155
Query: 150 SGLSK 154
GLS+
Sbjct: 156 FGLSR 160
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 105
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ ++ + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 106 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 155 FGLSRLMTGDTY 166
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 49 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 106
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ ++ + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 107 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 155
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 156 FGLSRLMTGDTY 167
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 52 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 109
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ ++ + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 110 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 158
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 159 FGLSRLMTGDTY 170
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 50 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 107
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ ++ + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 108 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 156
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 157 FGLSRLMTGDTY 168
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 46 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 103
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ +S + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 104 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 152
Query: 150 SGLSK 154
GLS+
Sbjct: 153 FGLSR 157
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 46 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 103
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ +S + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 104 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 152
Query: 150 SGLSK 154
GLS+
Sbjct: 153 FGLSR 157
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 61 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 118
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ ++ + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 119 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 167
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 168 FGLSRLMTGDTY 179
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 53 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 110
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ ++ + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 111 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 160 FGLSRLMTGDTY 171
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 50 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 107
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ ++ + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 108 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 156
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 157 FGLSRLMTGDTY 168
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 50 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 107
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ ++ + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 108 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 156
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 157 FGLSRLMTGDTY 168
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 18 TSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG 76
+V M K S + EAL E+ + +L H ++V ++G C P YL+ EY +G
Sbjct: 78 VAVKMLKEKADSSEREALM---SELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYG 134
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVR--------SLSTSQAVTMAYQVALGLEHISDKRLI 128
DL +L + R + R L+ + AYQVA G+E + K +
Sbjct: 135 DLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCV 194
Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR--------WVICSNIAEG 175
H+D+AARN L++ VKI GL++D Y R W+ ++ EG
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEG 249
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 35 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 93
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++EY +G L+ +L A R+ + Q + Q+ G+E++ KR I
Sbjct: 94 IMEYLPYGSLRDYLQA-----------HAERIDHIKLLQYTS---QICKGMEYLGTKRYI 139
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+A RN L+ ++ VKI GL+K
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTK 165
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 255 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 312
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ +S + MA Q++ +E++ K IH+++AARNCL+ + VK++
Sbjct: 313 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVAD 361
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 362 FGLSRLMTGDTY 373
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 17/141 (12%)
Query: 23 AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
KSL D + +F E + H +V+ ++GIC +G P ++L Y GDL+
Sbjct: 64 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 122
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
F+ P V+ L + QVA G++ ++ K+ +H+D+AARNC++
Sbjct: 123 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 168
Query: 141 SDLSVKISLSGLSKDTYQKEY 161
+VK++ GL++D KE+
Sbjct: 169 EKFTVKVADFGLARDMLDKEF 189
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 53 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 110
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ ++ + MA Q++ +E++ K IH+D+AARNCL+ + VK++
Sbjct: 111 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 150 SGLSK 154
GLS+
Sbjct: 160 FGLSR 164
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 63 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 121
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++EY +G L+ +L + R+ + Q + Q+ G+E++ KR I
Sbjct: 122 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 167
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+A RN L+ ++ VKI GL+K
Sbjct: 168 HRDLATRNILVENENRVKIGDFGLTK 193
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 50 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 108
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++EY +G L+ +L + R+ + Q + Q+ G+E++ KR I
Sbjct: 109 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 154
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+A RN L+ ++ VKI GL+K
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTK 180
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 36 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 94
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++EY +G L+ +L + R+ + Q + Q+ G+E++ KR I
Sbjct: 95 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 140
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+A RN L+ ++ VKI GL+K
Sbjct: 141 HRDLATRNILVENENRVKIGDFGLTK 166
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 32 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++EY +G L+ +L + R+ + Q + Q+ G+E++ KR I
Sbjct: 91 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 136
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+A RN L+ ++ VKI GL+K
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTK 162
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 37 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 95
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++EY +G L+ +L + R+ + Q + Q+ G+E++ KR I
Sbjct: 96 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 141
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+A RN L+ ++ VKI GL+K
Sbjct: 142 HRDLATRNILVENENRVKIGDFGLTK 167
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 50 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 108
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++EY +G L+ +L + R+ + Q + Q+ G+E++ KR I
Sbjct: 109 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 154
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+A RN L+ ++ VKI GL+K
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTK 180
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 38 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 96
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++EY +G L+ +L + R+ + Q + Q+ G+E++ KR I
Sbjct: 97 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 142
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+A RN L+ ++ VKI GL+K
Sbjct: 143 HRDLATRNILVENENRVKIGDFGLTK 168
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 35 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 93
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++EY +G L+ +L + R+ + Q + Q+ G+E++ KR I
Sbjct: 94 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 139
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+A RN L+ ++ VKI GL+K
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTK 165
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 31 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 89
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++EY +G L+ +L + R+ + Q + Q+ G+E++ KR I
Sbjct: 90 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 135
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+A RN L+ ++ VKI GL+K
Sbjct: 136 HRDLATRNILVENENRVKIGDFGLTK 161
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 32 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++EY +G L+ +L + R+ + Q + Q+ G+E++ KR I
Sbjct: 91 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 136
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+A RN L+ ++ VKI GL+K
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTK 162
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 39 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 97
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++EY +G L+ +L + R+ + Q + Q+ G+E++ KR I
Sbjct: 98 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 143
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+A RN L+ ++ VKI GL+K
Sbjct: 144 HRDLATRNILVENENRVKIGDFGLTK 169
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 30 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 88
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++EY +G L+ +L + R+ + Q + Q+ G+E++ KR I
Sbjct: 89 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 134
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+A RN L+ ++ VKI GL+K
Sbjct: 135 HRDLATRNILVENENRVKIGDFGLTK 160
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 18 TSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG 76
+V M KS H+ + EAL E+ + L H ++V ++G C G P ++ EY +G
Sbjct: 79 VAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
DL FL +LST + + QVA G+ ++ K IH+D+AARN
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIAN-STLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 194
Query: 137 CLISSDLSVKISLSGLSKDTYQKEYY 162
L+++ KI GL++D Y
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNY 220
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 20/146 (13%)
Query: 14 DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
DP QD + V+ K L HS + E L +F+REI++ L H ++VK G+C L
Sbjct: 35 DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 93
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++E+ +G L+++L + R+ + Q + Q+ G+E++ KR I
Sbjct: 94 IMEFLPYGSLREYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 139
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+A RN L+ ++ VKI GL+K
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTK 165
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
D +++ KS + + +F +E + + H ++V++IG+C P Y+++E G
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
D FL RV++L + M A G+E++ K IH+D+AARN
Sbjct: 198 DFLTFLRTEGARL---------RVKTL-----LQMVGDAAAGMEYLESKCCIHRDLAARN 243
Query: 137 CLISSDLSVKISLSGLSKD 155
CL++ +KIS G+S++
Sbjct: 244 CLVTEKNVLKISDFGMSRE 262
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
D +++ KS + + +F +E + + H ++V++IG+C P Y+++E G
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
D FL RV++L + M A G+E++ K IH+D+AARN
Sbjct: 198 DFLTFLRTEGARL---------RVKTL-----LQMVGDAAAGMEYLESKCCIHRDLAARN 243
Query: 137 CLISSDLSVKISLSGLSKD 155
CL++ +KIS G+S++
Sbjct: 244 CLVTEKNVLKISDFGMSRE 262
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 294 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 351
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ ++ + MA Q++ +E++ K IH+++AARNCL+ + VK++
Sbjct: 352 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVAD 400
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 401 FGLSRLMTGDTY 412
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 18 TSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG 76
+V M KS H+ + EAL E+ + L H ++V ++G C G P ++ EY +G
Sbjct: 79 VAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 77 DLKQFLLATRXX--XXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
DL FL R P LS+ + + QVA G+ ++ K IH+D+AA
Sbjct: 136 DLLNFLRRKRPPGLEYSYNPSHNPE-EQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAA 194
Query: 135 RNCLISSDLSVKISLSGLSKD 155
RN L+++ KI GL++D
Sbjct: 195 RNVLLTNGHVAKIGDFGLARD 215
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
+D + EF +E + ++ H ++V+++G+C P Y++ E+ +G+L +L
Sbjct: 252 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 309
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
+ ++ + MA Q++ +E++ K IH+++AARNCL+ + VK++
Sbjct: 310 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVAD 358
Query: 150 SGLSK----DTY 157
GLS+ DTY
Sbjct: 359 FGLSRLMTGDTY 370
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
D ++ + K D E E RE + +LD+ ++V++IG+C+ + L++E G
Sbjct: 39 DVAIKVLKQGTEKADTE---EMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGG 94
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
L +FL+ R + S + +QV++G++++ +K +H+D+AARN
Sbjct: 95 PLHKFLVGKR--------------EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARN 140
Query: 137 CLISSDLSVKISLSGLSK 154
L+ + KIS GLSK
Sbjct: 141 VLLVNRHYAKISDFGLSK 158
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
D ++ M K S+D EF E + L H +V++ G+C P +++ EY G
Sbjct: 30 DVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 84
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
L +L R T Q + M V +E++ K+ +H+D+AARN
Sbjct: 85 CLLNYLREMR--------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 130
Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
CL++ VK+S GLS+ EY
Sbjct: 131 CLVNDQGVVKVSDFGLSRYVLDDEY 155
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
D ++ M K S+D EF E + L H +V++ G+C P +++ EY G
Sbjct: 35 DVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 89
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
L +L R T Q + M V +E++ K+ +H+D+AARN
Sbjct: 90 CLLNYLREMR--------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 135
Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
CL++ VK+S GLS+ EY
Sbjct: 136 CLVNDQGVVKVSDFGLSRYVLDDEY 160
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
D ++ M K S+D EF E + L H +V++ G+C P +++ EY G
Sbjct: 34 DVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 88
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
L +L R T Q + M V +E++ K+ +H+D+AARN
Sbjct: 89 CLLNYLREMR--------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 134
Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
CL++ VK+S GLS+ EY
Sbjct: 135 CLVNDQGVVKVSDFGLSRYVLDDEY 159
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
D ++ M K S+D EF E + L H +V++ G+C P +++ EY G
Sbjct: 35 DVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 89
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
L +L R T Q + M V +E++ K+ +H+D+AARN
Sbjct: 90 CLLNYLREMR--------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 135
Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
CL++ VK+S GLS+ EY
Sbjct: 136 CLVNDQGVVKVSDFGLSRYVLDDEY 160
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
D ++ M K S+D EF E + L H +V++ G+C P +++ EY G
Sbjct: 50 DVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 104
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
L +L R T Q + M V +E++ K+ +H+D+AARN
Sbjct: 105 CLLNYLREMR--------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 150
Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
CL++ VK+S GLS+ EY
Sbjct: 151 CLVNDQGVVKVSDFGLSRYVLDDEY 175
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
D ++ M K S+D EF E + L H +V++ G+C P +++ EY G
Sbjct: 41 DVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 95
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
L +L R T Q + M V +E++ K+ +H+D+AARN
Sbjct: 96 CLLNYLREMR--------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 141
Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
CL++ VK+S GLS+ EY
Sbjct: 142 CLVNDQGVVKVSDFGLSRYVLDDEY 166
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 18 TSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG 76
+V M KS H+ + EAL E+ + L H ++V ++G C G P ++ EY +G
Sbjct: 79 VAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
DL FL + ST + + QVA G+ ++ K IH+D+AARN
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIAN-STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 194
Query: 137 CLISSDLSVKISLSGLSKDTYQKEYY 162
L+++ KI GL++D Y
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNY 220
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 19/146 (13%)
Query: 14 DPQDTSV---LMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYL 68
DP+ + + KSL + + K+EI++ L H ++VK GIC + G+ L
Sbjct: 43 DPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 102
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++E+ G LK++L + ++ Q + A Q+ G++++ ++ +
Sbjct: 103 IMEFLPSGSLKEYLPKNK--------------NKINLKQQLKYAVQICKGMDYLGSRQYV 148
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+AARN L+ S+ VKI GL+K
Sbjct: 149 HRDLAARNVLVESEHQVKIGDFGLTK 174
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 19/146 (13%)
Query: 14 DPQDTSV---LMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYL 68
DP+ + + KSL + + K+EI++ L H ++VK GIC + G+ L
Sbjct: 31 DPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 90
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
++E+ G LK++L + ++ Q + A Q+ G++++ ++ +
Sbjct: 91 IMEFLPSGSLKEYLPKNK--------------NKINLKQQLKYAVQICKGMDYLGSRQYV 136
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+AARN L+ S+ VKI GL+K
Sbjct: 137 HRDLAARNVLVESEHQVKIGDFGLTK 162
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
D ++ + K D E E RE + +LD+ ++V++IG+C+ + L++E G
Sbjct: 365 DVAIKVLKQGTEKADTE---EMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGG 420
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
L +FL+ R + S + +QV++G++++ +K +H+++AARN
Sbjct: 421 PLHKFLVGKR--------------EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARN 466
Query: 137 CLISSDLSVKISLSGLSK 154
L+ + KIS GLSK
Sbjct: 467 VLLVNRHYAKISDFGLSK 484
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 50 HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
H +VV ++G C + G P +++E+ +G+L +L + R + L+
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
+ ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ Y
Sbjct: 152 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 206
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 50 HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
H +VV ++G C + G P +++E+ +G+L +L + R + L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
+ ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ Y
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 204
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 50 HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
H +VV ++G C + G P +++E+ +G+L +L + R + L+
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
+ ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ Y
Sbjct: 187 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 241
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 7 ARGLKASDPQDT-SVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD 64
A GL SD T +V M K H + EAL E+ + L +H ++V ++G C G
Sbjct: 62 AYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHMNIVNLLGACTIGG 118
Query: 65 PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV-----RSLSTSQAVTMAYQVALGL 119
P ++ EY +GDL FL R P + +L ++ +YQVA G+
Sbjct: 119 PTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 176
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
++ K IH+D+AARN L++ KI GL++D
Sbjct: 177 AFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 212
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 7 ARGLKASDPQDT-SVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD 64
A GL SD T +V M K H + EAL E+ + L +H ++V ++G C G
Sbjct: 44 AYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHMNIVNLLGACTIGG 100
Query: 65 PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV-----RSLSTSQAVTMAYQVALGL 119
P ++ EY +GDL FL R P + +L ++ +YQVA G+
Sbjct: 101 PTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
++ K IH+D+AARN L++ KI GL++D
Sbjct: 159 AFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 194
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 7 ARGLKASDPQDT-SVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD 64
A GL SD T +V M K H + EAL E+ + L +H ++V ++G C G
Sbjct: 67 AYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHMNIVNLLGACTIGG 123
Query: 65 PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV-----RSLSTSQAVTMAYQVALGL 119
P ++ EY +GDL FL R P + +L ++ +YQVA G+
Sbjct: 124 PTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 181
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
++ K IH+D+AARN L++ KI GL++D
Sbjct: 182 AFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 217
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 7 ARGLKASDPQDT-SVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD 64
A GL SD T +V M K H + EAL E+ + L +H ++V ++G C G
Sbjct: 60 AYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHMNIVNLLGACTIGG 116
Query: 65 PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV-----RSLSTSQAVTMAYQVALGL 119
P ++ EY +GDL FL R P + +L ++ +YQVA G+
Sbjct: 117 PTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 174
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
++ K IH+D+AARN L++ KI GL++D
Sbjct: 175 AFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 210
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 18 TSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG 76
+V M KS H+ + EAL E+ + L H ++V ++G C G P ++ EY +G
Sbjct: 79 VAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
DL FL R L + + QVA G+ ++ K IH+D+AARN
Sbjct: 136 DLLNFL-----RRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 190
Query: 137 CLISSDLSVKISLSGLSKDTYQKEYY 162
L+++ KI GL++D Y
Sbjct: 191 VLLTNGHVAKIGDFGLARDIMNDSNY 216
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 18 TSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG 76
+V M KS H+ + EAL E+ + L H ++V ++G C G P ++ EY +G
Sbjct: 71 VAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 127
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
DL FL R L + + QVA G+ ++ K IH+D+AARN
Sbjct: 128 DLLNFL-----RRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 182
Query: 137 CLISSDLSVKISLSGLSKDTYQKEYY 162
L+++ KI GL++D Y
Sbjct: 183 VLLTNGHVAKIGDFGLARDIMNDSNY 208
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 19/138 (13%)
Query: 17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
D ++ M K S+D EF E + L H +V++ G+C P +++ EY G
Sbjct: 50 DVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 104
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
L +L R T Q + M V +E++ K+ +H+D+AARN
Sbjct: 105 CLLNYLREMR--------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 150
Query: 137 CLISSDLSVKISLSGLSK 154
CL++ VK+S GLS+
Sbjct: 151 CLVNDQGVVKVSDFGLSR 168
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 18 TSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG 76
+V M KS H+ + EAL E+ + L H ++V ++G C G P ++ EY +G
Sbjct: 64 VAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 120
Query: 77 DLKQFLLATRXXXXXXXXXXXPRV----------RSLSTSQAVTMAYQVALGLEHISDKR 126
DL FL R P R L + + QVA G+ ++ K
Sbjct: 121 DLLNFL--RRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN 178
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
IH+D+AARN L+++ KI GL++D Y
Sbjct: 179 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 214
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 50 HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
H +VV ++G C + G P +++E+ +G+L +L + R + L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 158
+ ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 200
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 32 DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXX 91
+E L F+RE+ +L H ++V MI + + D +YL++EY + L +++ +
Sbjct: 52 EETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG----- 106
Query: 92 XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG 151
LS A+ Q+ G++H D R++H+DI +N LI S+ ++KI G
Sbjct: 107 ----------PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFG 156
Query: 152 LSK 154
++K
Sbjct: 157 IAK 159
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Query: 50 HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQA 108
H +VV ++G C + G P +++E+ +G+L +L + R L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK---DFLTLEHL 146
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
+ ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ Y
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDY 200
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26 LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
L + +D AL E E ++ +LD+ ++V+MIGIC + + L++E + G L ++L
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 120
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
R + + + +QV++G++++ + +H+D+AARN L+ +
Sbjct: 121 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 165
Query: 145 VKISLSGLSKDTYQKE-YYK 163
KIS GLSK E YYK
Sbjct: 166 AKISDFGLSKALRADENYYK 185
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26 LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
L + +D AL E E ++ +LD+ ++V+MIGIC + + L++E + G L ++L
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 120
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
R + + + +QV++G++++ + +H+D+AARN L+ +
Sbjct: 121 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 165
Query: 145 VKISLSGLSKDTYQKE-YYK 163
KIS GLSK E YYK
Sbjct: 166 AKISDFGLSKALRADENYYK 185
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26 LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
L + +D AL E E ++ +LD+ ++V+MIGIC + + L++E + G L ++L
Sbjct: 52 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 110
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
R + + + +QV++G++++ + +H+D+AARN L+ +
Sbjct: 111 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 155
Query: 145 VKISLSGLSKDTYQKE-YYK 163
KIS GLSK E YYK
Sbjct: 156 AKISDFGLSKALRADENYYK 175
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 50 HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
H +VV ++G C + G P ++ E+ +G+L +L + R + L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
+ ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ Y
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26 LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
L + +D AL E E ++ +LD+ ++V+MIGIC + + L++E + G L ++L
Sbjct: 404 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 462
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
R + + + +QV++G++++ + +H+D+AARN L+ +
Sbjct: 463 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 507
Query: 145 VKISLSGLSKDTYQKE-YYK 163
KIS GLSK E YYK
Sbjct: 508 AKISDFGLSKALRADENYYK 527
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+K+EID+ L H H++K G C D L++EY G L+ +L
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL------------- 109
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
PR S+ +Q + A Q+ G+ ++ + IH+++AARN L+ +D VKI GL+K
Sbjct: 110 --PR-HSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKA 166
Query: 156 TYQK-EYYKYR 165
+ EYY+ R
Sbjct: 167 VPEGHEYYRVR 177
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26 LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
L + +D AL E E ++ +LD+ ++V+MIGIC + + L++E + G L ++L
Sbjct: 405 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 463
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
R + + + +QV++G++++ + +H+D+AARN L+ +
Sbjct: 464 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 508
Query: 145 VKISLSGLSKDTYQKE-YYK 163
KIS GLSK E YYK
Sbjct: 509 AKISDFGLSKALRADENYYK 528
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26 LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
L + +D AL E E ++ +LD+ ++V+MIGIC + + L++E + G L ++L
Sbjct: 46 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 104
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
R + + + +QV++G++++ + +H+D+AARN L+ +
Sbjct: 105 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 149
Query: 145 VKISLSGLSKDTYQKE-YYK 163
KIS GLSK E YYK
Sbjct: 150 AKISDFGLSKALRADENYYK 169
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 50 HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
H +VV ++G C + G P ++ E+ +G+L +L + R + L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
+ ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ Y
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26 LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
L + +D AL E E ++ +LD+ ++V+MIGIC + + L++E + G L ++L
Sbjct: 60 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 118
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
R + + + +QV++G++++ + +H+D+AARN L+ +
Sbjct: 119 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 163
Query: 145 VKISLSGLSKDTYQKE-YYK 163
KIS GLSK E YYK
Sbjct: 164 AKISDFGLSKALRADENYYK 183
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Query: 50 HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQA 108
H +VV ++G C + G P +++E+ +G+L +L + R L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK---DFLTLEHL 146
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
+ ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ Y
Sbjct: 147 ICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 200
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26 LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
L + +D AL E E ++ +LD+ ++V+MIGIC + + L++E + G L ++L
Sbjct: 40 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 98
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
R + + + +QV++G++++ + +H+D+AARN L+ +
Sbjct: 99 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 143
Query: 145 VKISLSGLSKDTYQKE-YYK 163
KIS GLSK E YYK
Sbjct: 144 AKISDFGLSKALRADENYYK 163
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26 LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
L + +D AL E E ++ +LD+ ++V+MIGIC + + L++E + G L ++L
Sbjct: 42 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 100
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
R + + + +QV++G++++ + +H+D+AARN L+ +
Sbjct: 101 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 145
Query: 145 VKISLSGLSKDTYQKE-YYK 163
KIS GLSK E YYK
Sbjct: 146 AKISDFGLSKALRADENYYK 165
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+K+EID+ L H H++K G C D L++EY G L+ +L
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL------------- 109
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
PR S+ +Q + A Q+ G+ ++ + IH+++AARN L+ +D VKI GL+K
Sbjct: 110 --PR-HSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKA 166
Query: 156 TYQK-EYYKYR 165
+ EYY+ R
Sbjct: 167 VPEGHEYYRVR 177
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 17/130 (13%)
Query: 26 LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
L + +D AL E E ++ +LD+ ++V+MIGIC + + L++E + G L ++L
Sbjct: 46 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 104
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
R + + + +QV++G++++ + +H+D+AARN L+ +
Sbjct: 105 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 149
Query: 145 VKISLSGLSK 154
KIS GLSK
Sbjct: 150 AKISDFGLSK 159
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 19/131 (14%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+K+EID+ L H H++K G C D L++EY G L+ +L
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL------------- 126
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
PR S+ +Q + A Q+ G+ ++ + IH+D+AARN L+ +D VKI GL+K
Sbjct: 127 --PR-HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183
Query: 156 TYQK-EYYKYR 165
+ E Y+ R
Sbjct: 184 VPEGHEXYRVR 194
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 50 HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQA 108
H +VV ++G C + G P +++E+ +G+L +L + R L+
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
+ ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 7 ARGLKASDPQDT-SVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD 64
A GL SD T +V M K H + EAL E+ + L +H ++V ++G C G
Sbjct: 67 AYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHMNIVNLLGACTIGG 123
Query: 65 PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV-----RSLSTSQAVTMAYQVALGL 119
P ++ EY +GDL FL R P + +L ++ +YQVA G+
Sbjct: 124 PTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 181
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++ K IH+D+AARN L++ KI GL++
Sbjct: 182 AFLASKNCIHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 18/141 (12%)
Query: 17 DTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC-RDGDPHY-LLLEYT 73
+T L+A K L HS D+ +F+REI + L +VK G+ G P L++EY
Sbjct: 34 NTGALVAVKQLQHSGPDQQ-RDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYL 92
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G L+ FL R L S+ + + Q+ G+E++ +R +H+D+A
Sbjct: 93 PSGCLRDFLQRHRAR--------------LDASRLLLYSSQICKGMEYLGSRRCVHRDLA 138
Query: 134 ARNCLISSDLSVKISLSGLSK 154
ARN L+ S+ VKI+ GL+K
Sbjct: 139 ARNILVESEAHVKIADFGLAK 159
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LK ++ SV + K+L ++ +F E + + DH +++++ G+ P ++
Sbjct: 66 LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
EY + G L FL + Q V M +A G++++SD +H
Sbjct: 125 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGFVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN LI+S+L K+S GLS+
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSR 195
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 15/128 (11%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+F E + LDH H+VK+IGI + +P ++++E +G+L +L +
Sbjct: 70 EKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNK--------- 119
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
SL V + Q+ + ++ +H+DIA RN L++S VK+ GLS+
Sbjct: 120 -----NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY 174
Query: 156 TYQKEYYK 163
++YYK
Sbjct: 175 IEDEDYYK 182
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LK ++ SV + K+L ++ +F E + + DH +++++ G+ P ++
Sbjct: 54 LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 112
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
EY + G L FL + Q V M +A G++++SD +H
Sbjct: 113 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 158
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN LI+S+L K+S GLS+
Sbjct: 159 RDLAARNILINSNLVCKVSDFGLSR 183
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 15/128 (11%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+F E + LDH H+VK+IGI + +P ++++E +G+L +L +
Sbjct: 58 EKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNK--------- 107
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
SL V + Q+ + ++ +H+DIA RN L++S VK+ GLS+
Sbjct: 108 -----NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY 162
Query: 156 TYQKEYYK 163
++YYK
Sbjct: 163 IEDEDYYK 170
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LK +D +V + K+L ++ +F E + + DH +VV + G+ G P ++
Sbjct: 64 LKLPGKRDVAVAI-KTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIV 122
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
+E+ + G L FL + Q V M +A G+ +++D +H
Sbjct: 123 IEFMENGALDAFLRKHDG--------------QFTVIQLVGMLRGIAAGMRYLADMGYVH 168
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN L++S+L K+S GLS+
Sbjct: 169 RDLAARNILVNSNLVCKVSDFGLSR 193
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LK ++ SV + K+L ++ +F E + + DH +++++ G+ P ++
Sbjct: 37 LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 95
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
EY + G L FL + Q V M +A G++++SD +H
Sbjct: 96 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 141
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN LI+S+L K+S GLS+
Sbjct: 142 RDLAARNILINSNLVCKVSDFGLSR 166
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LK ++ SV + K+L ++ +F E + + DH +++++ G+ P ++
Sbjct: 66 LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
EY + G L FL + Q V M +A G++++SD +H
Sbjct: 125 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN LI+S+L K+S GLS+
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSR 195
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LK ++ SV + K+L ++ +F E + + DH +++++ G+ P ++
Sbjct: 64 LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 122
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
EY + G L FL + Q V M +A G++++SD +H
Sbjct: 123 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 168
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN LI+S+L K+S GLS+
Sbjct: 169 RDLAARNILINSNLVCKVSDFGLSR 193
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 15/128 (11%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+F E + LDH H+VK+IGI + +P ++++E +G+L +L +
Sbjct: 54 EKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNK--------- 103
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
SL V + Q+ + ++ +H+DIA RN L++S VK+ GLS+
Sbjct: 104 -----NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY 158
Query: 156 TYQKEYYK 163
++YYK
Sbjct: 159 IEDEDYYK 166
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LK ++ SV + K+L ++ +F E + + DH +++++ G+ P ++
Sbjct: 66 LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
EY + G L FL + Q V M +A G++++SD +H
Sbjct: 125 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN LI+S+L K+S GLS+
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSR 195
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LK ++ SV + K+L ++ +F E + + DH +++++ G+ P ++
Sbjct: 66 LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
EY + G L FL + Q V M +A G++++SD +H
Sbjct: 125 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN LI+S+L K+S GLS+
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSR 195
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 50 HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
H +VV ++G C + G P +++E+ +G+L +L + R + L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
+ ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LK ++ SV + K+L ++ +F E + + DH +++++ G+ P ++
Sbjct: 66 LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
EY + G L FL + Q V M +A G++++SD +H
Sbjct: 125 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN LI+S+L K+S GLS+
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSR 195
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 50 HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
H +VV ++G C + G P +++E+ +G+L +L + R + L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
+ ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LKA +++ V + K+L + EF E + + +H +++++ G+ + P +L
Sbjct: 35 LKAPGKKESCVAI-KTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMIL 93
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
E+ + G L FL + Q V M +A G+ ++++ +H
Sbjct: 94 TEFMENGALDSFLRLNDG--------------QFTVIQLVGMLRGIASGMRYLAEMSYVH 139
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN L++S+L K+S GLS+
Sbjct: 140 RDLAARNILVNSNLVCKVSDFGLSR 164
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 15/141 (10%)
Query: 15 PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
P + +A K+L ++ +F E + + DH +V+ + G+ P ++ E+
Sbjct: 57 PGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFM 116
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
+ G L FL + Q V M +A G+++++D +H+D+A
Sbjct: 117 ENGSLDSFLRQNDG--------------QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLA 162
Query: 134 ARNCLISSDLSVKISLSGLSK 154
ARN L++S+L K+S GLS+
Sbjct: 163 ARNILVNSNLVCKVSDFGLSR 183
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LKA +++ V + K+L + EF E + + +H +++++ G+ + P +L
Sbjct: 37 LKAPGKKESCVAI-KTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMIL 95
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
E+ + G L FL + Q V M +A G+ ++++ +H
Sbjct: 96 TEFMENGALDSFLRLNDG--------------QFTVIQLVGMLRGIASGMRYLAEMSYVH 141
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN L++S+L K+S GLS+
Sbjct: 142 RDLAARNILVNSNLVCKVSDFGLSR 166
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+F E ++ KL H +V++ G+C + P L+ E+ + G L +L R
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL------- 99
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
+ + M V G+ ++ + +IH+D+AARNCL+ + +K+S G+++
Sbjct: 100 -------FAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRF 152
Query: 156 TYQKEY 161
+Y
Sbjct: 153 VLDDQY 158
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 50 HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
H +VV ++G C + G P ++ E+ +G+L +L + R + L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
+ ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 16 QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
++TSVL A ++ +K +E L ++ EID+ DH ++VK++ + ++L+E+
Sbjct: 32 KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 91
Query: 76 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
G + +L R L+ SQ + Q L ++ D ++IH+D+ A
Sbjct: 92 GAVDAVMLELE--------------RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 137
Query: 136 NCLISSDLSVKISLSGLS 153
N L + D +K++ G+S
Sbjct: 138 NILFTLDGDIKLADFGVS 155
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 16 QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
++TSVL A ++ +K +E L ++ EID+ DH ++VK++ + ++L+E+
Sbjct: 59 KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 76 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
G + +L R L+ SQ + Q L ++ D ++IH+D+ A
Sbjct: 119 GAVDAVMLELE--------------RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 164
Query: 136 NCLISSDLSVKISLSGLS 153
N L + D +K++ G+S
Sbjct: 165 NILFTLDGDIKLADFGVS 182
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 16 QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
++TSVL A ++ +K +E L ++ EID+ DH ++VK++ + ++L+E+
Sbjct: 59 KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 76 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
G + +L R L+ SQ + Q L ++ D ++IH+D+ A
Sbjct: 119 GAVDAVMLELE--------------RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 164
Query: 136 NCLISSDLSVKISLSGLS 153
N L + D +K++ G+S
Sbjct: 165 NILFTLDGDIKLADFGVS 182
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 16 QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
++TSVL A ++ +K +E L ++ EID+ DH ++VK++ + ++L+E+
Sbjct: 59 KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 76 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
G + +L R L+ SQ + Q L ++ D ++IH+D+ A
Sbjct: 119 GAVDAVMLELE--------------RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 164
Query: 136 NCLISSDLSVKISLSGLS 153
N L + D +K++ G+S
Sbjct: 165 NILFTLDGDIKLADFGVS 182
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 50 HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQA 108
H +VV ++G C + G P +++E+ +G+L +L + R + L+
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYK-DFLTLEHL 150
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
+ ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D
Sbjct: 151 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 17 DTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL--LLEYT 73
+T L+A K L HS D+ +F+REI + L +VK G+ L ++EY
Sbjct: 38 NTGALVAVKQLQHSGPDQQ-RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 96
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G L+ FL R L S+ + + Q+ G+E++ +R +H+D+A
Sbjct: 97 PSGCLRDFLQRHRAR--------------LDASRLLLYSSQICKGMEYLGSRRCVHRDLA 142
Query: 134 ARNCLISSDLSVKISLSGLSK-DTYQKEYYKYR 165
ARN L+ S+ VKI+ GL+K K+YY R
Sbjct: 143 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 175
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LK ++ SV + K+L ++ +F E + + DH +++++ G+ P ++
Sbjct: 66 LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
EY + G L FL + Q V M +A G++++SD +H
Sbjct: 125 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN LI+S+L K+S GL++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLAR 195
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 17 DTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL--LLEYT 73
+T L+A K L HS D+ +F+REI + L +VK G+ L ++EY
Sbjct: 50 NTGALVAVKQLQHSGPDQQ-RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 108
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G L+ FL R L S+ + + Q+ G+E++ +R +H+D+A
Sbjct: 109 PSGCLRDFLQRHRAR--------------LDASRLLLYSSQICKGMEYLGSRRCVHRDLA 154
Query: 134 ARNCLISSDLSVKISLSGLSK-DTYQKEYYKYR 165
ARN L+ S+ VKI+ GL+K K+YY R
Sbjct: 155 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 187
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 17 DTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL--LLEYT 73
+T L+A K L HS D+ +F+REI + L +VK G+ L ++EY
Sbjct: 37 NTGALVAVKQLQHSGPDQQ-RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 95
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G L+ FL R L S+ + + Q+ G+E++ +R +H+D+A
Sbjct: 96 PSGCLRDFLQRHRAR--------------LDASRLLLYSSQICKGMEYLGSRRCVHRDLA 141
Query: 134 ARNCLISSDLSVKISLSGLSK-DTYQKEYYKYR 165
ARN L+ S+ VKI+ GL+K K+YY R
Sbjct: 142 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 174
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LK ++ SV + K+L ++ +F E + + DH +++++ G+ P ++
Sbjct: 66 LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
EY + G L FL + Q V M +A G++++SD +H
Sbjct: 125 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN LI+S+L K+S GL +
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLGR 195
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
++REI++ L H H+VK G C D L++EY G L+ +L
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL------------- 104
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
PR + +Q + A Q+ G+ ++ + IH+ +AARN L+ +D VKI GL+K
Sbjct: 105 --PR-HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKA 161
Query: 156 TYQK-EYYKYR 165
+ EYY+ R
Sbjct: 162 VPEGHEYYRVR 172
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
++REI++ L H H+VK G C D L++EY G L+ +L
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL------------- 103
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
PR + +Q + A Q+ G+ ++ + IH+ +AARN L+ +D VKI GL+K
Sbjct: 104 --PR-HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKA 160
Query: 156 TYQK-EYYKYR 165
+ EYY+ R
Sbjct: 161 VPEGHEYYRVR 171
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 24 KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
K+L D+ +F E + + DH +++ + G+ P ++ EY + G L FL
Sbjct: 48 KTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR 107
Query: 84 ATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
+ Q V M + G++++SD +H+D+AARN L++S+L
Sbjct: 108 KNDG--------------RFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNL 153
Query: 144 SVKISLSGLSK 154
K+S G+S+
Sbjct: 154 VCKVSDFGMSR 164
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+F E ++ KL H +V++ G+C + P L+ E+ + G L +L R
Sbjct: 45 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL------- 97
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
+ + M V G+ ++ + +IH+D+AARNCL+ + +K+S G+++
Sbjct: 98 -------FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 150
Query: 156 TYQKEY 161
+Y
Sbjct: 151 VLDDQY 156
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+F E ++ KL H +V++ G+C + P L+ E+ + G L +L R
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL------- 99
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
+ + M V G+ ++ + +IH+D+AARNCL+ + +K+S G+++
Sbjct: 100 -------FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 152
Query: 156 TYQKEY 161
+Y
Sbjct: 153 VLDDQY 158
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 14/131 (10%)
Query: 24 KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
K+L ++ +F E + + DH +++ + G+ P ++ EY + G L FL
Sbjct: 56 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK 115
Query: 84 ATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
+ Q V M ++ G++++SD +H+D+AARN LI+S+L
Sbjct: 116 KNDG--------------QFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNL 161
Query: 144 SVKISLSGLSK 154
K+S GLS+
Sbjct: 162 VCKVSDFGLSR 172
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 24 KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
K+L D+ +F E + + DH +++ + G+ P ++ EY + G L FL
Sbjct: 63 KTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR 122
Query: 84 ATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
+ Q V M + G++++SD +H+D+AARN L++S+L
Sbjct: 123 KNDG--------------RFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNL 168
Query: 144 SVKISLSGLSK 154
K+S G+S+
Sbjct: 169 VCKVSDFGMSR 179
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+F E ++ KL H +V++ G+C + P L+ E+ + G L +L R
Sbjct: 50 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL------- 102
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
+ + M V G+ ++ + +IH+D+AARNCL+ + +K+S G+++
Sbjct: 103 -------FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 155
Query: 156 TYQKEY 161
+Y
Sbjct: 156 VLDDQY 161
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 24 KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
K+L D+ +F E + + DH +++ + G+ P ++ EY + G L FL
Sbjct: 42 KTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR 101
Query: 84 ATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
+ Q V M + G++++SD +H+D+AARN L++S+L
Sbjct: 102 KNDG--------------RFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNL 147
Query: 144 SVKISLSGLSK 154
K+S G+S+
Sbjct: 148 VCKVSDFGMSR 158
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 19/133 (14%)
Query: 29 SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXX 88
S+DD F E ++ KL H +V++ G+C + P L+ E+ + G L +L R
Sbjct: 65 SEDD-----FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL 119
Query: 89 XXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
+ + M V G+ ++ + +IH+D+AARNCL+ + +K+S
Sbjct: 120 --------------FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVS 165
Query: 149 LSGLSKDTYQKEY 161
G+++ +Y
Sbjct: 166 DFGMTRFVLDDQY 178
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E +L +L H +V++ + +P Y++ EY + G L FL
Sbjct: 50 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 95
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 96 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 155
Query: 158 QKEY 161
EY
Sbjct: 156 DNEY 159
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+F E ++ KL H +V++ G+C + P L+ E+ + G L +L R
Sbjct: 48 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL------- 100
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
+ + M V G+ ++ + +IH+D+AARNCL+ + +K+S G+++
Sbjct: 101 -------FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 153
Query: 156 TYQKEY 161
+Y
Sbjct: 154 VLDDQY 159
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
L+ +D V + K+L + +F E + + DH +++++ G+ G ++
Sbjct: 70 LRVPGQRDVPVAI-KALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
EY + G L FL + Q V M V G+ ++SD +H
Sbjct: 129 TEYMENGSLDTFLRTHDG--------------QFTIMQLVGMLRGVGAGMRYLSDLGYVH 174
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN L+ S+L K+S GLS+
Sbjct: 175 RDLAARNVLVDSNLVCKVSDFGLSR 199
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E +L +L H +V++ + +P Y++ EY + G L FL
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 106
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 107 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 166
Query: 158 QKEY 161
EY
Sbjct: 167 DNEY 170
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E +L +L H +V++ + +P Y++ EY + G L FL
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 100
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Query: 158 QKEY 161
EY
Sbjct: 161 DNEY 164
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E +L +L H +V++ + +P Y++ EY + G L FL
Sbjct: 60 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 105
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 106 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 165
Query: 158 QKEY 161
EY
Sbjct: 166 DNEY 169
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
L+ +D V + K+L + +F E + + DH +++++ G+ G ++
Sbjct: 70 LRVPGQRDVPVAI-KALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
EY + G L FL + Q V M V G+ ++SD +H
Sbjct: 129 TEYMENGSLDTFLRTHDG--------------QFTIMQLVGMLRGVGAGMRYLSDLGYVH 174
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN L+ S+L K+S GLS+
Sbjct: 175 RDLAARNVLVDSNLVCKVSDFGLSR 199
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E +L +L H +V++ + +P Y++ EY + G L FL
Sbjct: 65 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 110
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 111 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 170
Query: 158 QKEY 161
EY
Sbjct: 171 DNEY 174
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LK S + + K+L ++ +F E + + H +++++ G+ P ++
Sbjct: 65 LKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 124
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
EY + G L +FL + S Q V M +A G++++++ +H
Sbjct: 125 TEYMENGALDKFL--------------REKDGEFSVLQLVGMLRGIAAGMKYLANMNYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN L++S+L K+S GLS+
Sbjct: 171 RDLAARNILVNSNLVCKVSDFGLSR 195
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LK ++ SV + K+L ++ +F E + + DH +++++ G+ P ++
Sbjct: 66 LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
E + G L FL + Q V M +A G++++SD +H
Sbjct: 125 TEXMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN LI+S+L K+S GLS+
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSR 195
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 53/166 (31%)
Query: 50 HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATR------------------XXXX 90
H +VV ++G C + G P +++EY +G+L +L + R
Sbjct: 90 HLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEP 149
Query: 91 XXXXXXXPRVRSLSTSQA----------------------------------VTMAYQVA 116
PR+ S+++S++ ++ ++QVA
Sbjct: 150 GLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVA 209
Query: 117 LGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
G+E +S ++ IH+D+AARN L+S + VKI GL++D Y+ Y
Sbjct: 210 RGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LK ++ SV + K+L ++ +F E + + DH +++++ G+ P ++
Sbjct: 37 LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 95
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
E + G L FL + Q V M +A G++++SD +H
Sbjct: 96 TEXMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 141
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN LI+S+L K+S GLS+
Sbjct: 142 RDLAARNILINSNLVCKVSDFGLSR 166
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
LK ++ SV + K+L ++ +F E + + DH +++++ G+ P ++
Sbjct: 66 LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
E + G L FL + Q V M +A G++++SD +H
Sbjct: 125 TEXMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGAVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
+D+AARN LI+S+L K+S GLS+
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSR 195
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 15/141 (10%)
Query: 15 PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
P + +A K+L ++ +F E + + DH +V+ + G+ P ++ E+
Sbjct: 31 PGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFM 90
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
+ G L FL + Q V M +A G+++++D +H+ +A
Sbjct: 91 ENGSLDSFLRQNDG--------------QFTVIQLVGMLRGIAAGMKYLADMNYVHRALA 136
Query: 134 ARNCLISSDLSVKISLSGLSK 154
ARN L++S+L K+S GLS+
Sbjct: 137 ARNILVNSNLVCKVSDFGLSR 157
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E +L +L H +V++ + +P Y++ EY + G L FL
Sbjct: 51 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 96
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
P L+ ++ + MA Q+A G+ I ++ IH+++ A N L+S LS KI+ GL++
Sbjct: 97 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIE 156
Query: 158 QKEY 161
EY
Sbjct: 157 DNEY 160
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E +L +L H +V++ + +P Y++ EY + G L FL
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 100
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E +L +L H +V++ + +P Y++ EY + G L FL
Sbjct: 56 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 101
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 102 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 158
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E +L +L H +V++ + +P Y++ EY + G L FL
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 100
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E +L +L H +V++ + +P Y++ EY + G L FL
Sbjct: 57 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 102
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 103 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 159
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E +L +L H +V++ + +P Y++ EY + G L FL
Sbjct: 64 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 109
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 110 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 166
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E +L +L H +V++ + +P Y++ EY + G L FL
Sbjct: 63 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 108
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 109 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 165
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E +L +L H +V++ + +P Y++ EY + G L FL
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 100
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E +L +L H +V++ + +P Y++ EY + G L FL
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 106
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 107 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 163
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 34 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 93
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+++ +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 94 -LIMQLMPFGXLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 176
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 34/165 (20%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-- 64
+G+ + + + +A K L + +A EF E + +DH H+V+++G+C
Sbjct: 56 KGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ 115
Query: 65 ------PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALG 118
PH LLEY ++ + + Q+A G
Sbjct: 116 LVTQLMPHGCLLEYVH-----------------------EHKDNIGSQLLLNWCVQIAKG 152
Query: 119 LEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEY 161
+ ++ ++RL+H+D+AARN L+ S VKI+ GL++ + +KEY
Sbjct: 153 MMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 197
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 33 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+++ +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 93 -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 35 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 94
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+++ +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 95 -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 177
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 34 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 93
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+++ +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 94 -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 176
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 36 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 95
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+++ +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 96 -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 37 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 96
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+++ +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 97 -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 179
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 40 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 99
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+++ +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 100 -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 34/165 (20%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-- 64
+G+ + + + +A K L + +A EF E + +DH H+V+++G+C
Sbjct: 33 KGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ 92
Query: 65 ------PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALG 118
PH LLEY ++ + + Q+A G
Sbjct: 93 LVTQLMPHGCLLEYV-----------------------HEHKDNIGSQLLLNWCVQIAKG 129
Query: 119 LEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEY 161
+ ++ ++RL+H+D+AARN L+ S VKI+ GL++ + +KEY
Sbjct: 130 MMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 174
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 33 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 93 -LITQLMPFGXLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 16 QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
++T L A ++ +K +E L ++ EI++ DH ++VK++G ++++E+
Sbjct: 41 KETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPG 100
Query: 76 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
G + +L R L+ Q + Q+ L + KR+IH+D+ A
Sbjct: 101 GAVDAIMLELD--------------RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAG 146
Query: 136 NCLISSDLSVKISLSGLS 153
N L++ + ++++ G+S
Sbjct: 147 NVLMTLEGDIRLADFGVS 164
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 16 QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
++T L A ++ +K +E L ++ EI++ DH ++VK++G ++++E+
Sbjct: 33 KETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPG 92
Query: 76 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
G + +L R L+ Q + Q+ L + KR+IH+D+ A
Sbjct: 93 GAVDAIMLELD--------------RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAG 138
Query: 136 NCLISSDLSVKISLSGLS 153
N L++ + ++++ G+S
Sbjct: 139 NVLMTLEGDIRLADFGVS 156
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 33 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 93 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 43 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 102
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 103 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 147
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 148 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 185
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 33 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 93 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 36 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 95
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 96 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 35 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 94
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 95 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 177
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 33 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 93 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 40 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 99
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 100 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 58 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 117
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 118 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 162
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 163 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 200
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 40 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 99
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 100 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 36 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 95
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 96 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 36 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 95
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 96 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 39 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 98
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 99 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 143
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 144 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 181
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 27 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 86
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 87 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 131
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 132 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 169
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 30 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 89
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 90 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAEGMNYLEDRR 134
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 135 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 172
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y++ EY G L FL
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMG---------- 108
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V MA Q+A G+ ++ +H+D+AA N L+ +L K++ GL++
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIE 165
Query: 158 QKEY 161
EY
Sbjct: 166 DNEY 169
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 34 ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
+L + RE+ + L+H ++VK+ + YL++EY G++ +L+A
Sbjct: 57 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG------- 109
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+ +A + Q+ +++ KR++H+D+ A N L+ +D+++KI+ G S
Sbjct: 110 --------RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 161
Query: 154 KD 155
+
Sbjct: 162 NE 163
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 34 ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
+L + RE+ + L+H ++VK+ + YL++EY G++ +L+A
Sbjct: 54 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG------- 106
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+ +A + Q+ +++ KR++H+D+ A N L+ +D+++KI+ G S
Sbjct: 107 --------RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 158
Query: 154 KD 155
+
Sbjct: 159 NE 160
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 37 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 96
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+++ +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 97 -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ G +K +KEY+
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 179
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 35 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 94
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+++ +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 95 -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ G +K +KEY+
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 35 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 94
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+++ +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 95 -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ G +K +KEY+
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y+++EY G L FL
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMG---------- 108
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 158 QKEY 161
EY
Sbjct: 166 DNEY 169
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A L + +A E E + +D+ HV +++GIC
Sbjct: 67 KGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 126
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 127 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 171
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ GL+K +KEY+
Sbjct: 172 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 209
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+ +K + + V++ K L+ D+E F +E+ + L+H +V+K IG+
Sbjct: 24 GQAIKVTHRETGEVMVMKELIRF-DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRL 82
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
+ EY G L+ + + SQ V+ A +A G+ ++
Sbjct: 83 NFITEYIKGGTLRGIIKSMDS--------------QYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK 154
+IH+D+ + NCL+ + +V ++ GL++
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLAR 156
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 32 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 91
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G++ + L ++ + T ++A L + KR+IH
Sbjct: 92 LEYAPRGEVYKELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS 160
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 32 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 91
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G++ + L ++ + T ++A L + KR+IH
Sbjct: 92 LEYAPRGEVYKELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS 160
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 31 ARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 90
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 91 LEYAPLGTVYREL---------------QKLSRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S+ +KI+ G S
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWS 159
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 35 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 94
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 95 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ G +K +KEY+
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 31 ARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 90
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 91 LEYAPLGTVYREL---------------QKLSRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S+ +KI+ G S
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWS 159
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 33 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 93 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ G +K +KEY+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 175
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+GL + + + +A K L + +A E E + +D+ HV +++GIC
Sbjct: 40 KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 99
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L ++ + ++ + + Q+A G+ ++ D+R
Sbjct: 100 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ + VKI+ G +K +KEY+
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 182
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 29 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 88
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 89 LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 133
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 134 RDIKPENLLLGSAGELKIANFGWS 157
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 30 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 89
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 90 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 135 RDIKPENLLLGSAGELKIANFGWS 158
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y++ EY G L FL
Sbjct: 53 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG---------- 101
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 102 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 158
Query: 158 QKEY 161
EY
Sbjct: 159 DNEY 162
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y++ EY G L FL
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMG---------- 108
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 158 QKEY 161
EY
Sbjct: 166 DNEY 169
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y+++EY G L FL
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMG---------- 108
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 158 QKEY 161
EY
Sbjct: 166 DNEY 169
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 29/154 (18%)
Query: 16 QDTSVLMAKSLVHSKDD------EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
+D SV+ KSL+ + E EF+RE+ + L+H ++VK+ G+ +P ++
Sbjct: 42 KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMV 99
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR--L 127
+E+ GDL LL + + S + + +ALG+E++ ++ +
Sbjct: 100 MEFVPCGDLYHRLLD--------------KAHPIKWSVKLRLMLDIALGIEYMQNQNPPI 145
Query: 128 IHKDIAARNCLISS-----DLSVKISLSGLSKDT 156
+H+D+ + N + S + K++ GLS+ +
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS 179
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y++ EY G L FL
Sbjct: 49 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMG---------- 97
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 98 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 154
Query: 158 QKEY 161
EY
Sbjct: 155 DNEY 158
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y++ EY G L FL
Sbjct: 51 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMG---------- 99
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 100 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 156
Query: 158 QKEY 161
EY
Sbjct: 157 DNEY 160
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E + KL H +V++ + + +P Y++ EY + G L FL
Sbjct: 51 FLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEG---------- 99
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
R+L V MA QVA G+ +I IH+D+ + N L+ + L KI+ GL++
Sbjct: 100 ---RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLAR 153
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 34 ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
++ F E +L L H +V++ + +P Y++ EY G L FL +
Sbjct: 51 SVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL- 109
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P++ S Q+A G+ +I K IH+D+ A N L+S L KI+ GL+
Sbjct: 110 ----PKLIDFSA--------QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLA 157
Query: 154 KDTYQKEY 161
+ EY
Sbjct: 158 RVIEDNEY 165
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y++ EY G L FL
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG---------- 274
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 275 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 158 QKEY 161
EY
Sbjct: 332 DNEY 335
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y+++EY G L FL
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMG---------- 108
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y++ EY G L FL
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG---------- 274
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 275 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 158 QKEY 161
EY
Sbjct: 332 DNEY 335
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 30 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 89
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 90 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS 158
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 26 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 85
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 86 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 130
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 131 RDIKPENLLLGSAGELKIADFGWS 154
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 27 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 86
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 87 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS 155
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y++ EY G L FL
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMG---------- 108
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 158 QKEY 161
EY
Sbjct: 166 DNEY 169
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
+ E+ + C+L H ++++ D + YL+LE G++ ++L
Sbjct: 59 QNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL--------------KN 104
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 158
RV+ S ++A +Q+ G+ ++ ++H+D+ N L++ ++++KI+ GL+ T
Sbjct: 105 RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA--TQL 162
Query: 159 KEYYKYRWVICS 170
K ++ + +C
Sbjct: 163 KMPHEKHYTLCG 174
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 31 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 90
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 91 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 135
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 136 RDIKPENLLLGSAGELKIADFGWS 159
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 30 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 89
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 90 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS 158
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 29 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 88
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 89 LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 133
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 134 RDIKPENLLLGSAGELKIADFGWS 157
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 27 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 86
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 87 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS 155
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 28 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 88 LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWS 156
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 30 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 89
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 90 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS 158
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 32 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 91
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 92 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS 160
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 27 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 86
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 87 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS 155
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 27 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 86
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 87 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS 155
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y++ EY G L FL
Sbjct: 309 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG---------- 357
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 358 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 414
Query: 158 QKEY 161
EY
Sbjct: 415 DNEY 418
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 30 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 89
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 90 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS 158
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y++ EY + G L FL
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETG---------- 105
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V M+ Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 106 ---KYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 162
Query: 158 QKEY 161
EY
Sbjct: 163 DNEY 166
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 32 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 91
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 92 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS 160
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 28 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 88 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWS 156
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 27 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 86
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 87 LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS 155
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 28 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 88 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWS 156
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 32 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 91
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 92 LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS 160
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 44 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 103
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 104 LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 148
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 149 RDIKPENLLLGSAGELKIADFGWS 172
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 27 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 86
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 87 LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS 155
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 27 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 86
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 87 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS 155
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 53 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 112
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 113 LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWS 181
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 45 FCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLS 104
FC+ H H+V +IG C + + L+ +Y + G+LK+ L + S+S
Sbjct: 91 FCR--HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM-----------SMS 137
Query: 105 TSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
Q + + A GL ++ + +IH+D+ + N L+ + KI+ G+SK
Sbjct: 138 WEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK 187
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 45 FCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLS 104
FC+ H H+V +IG C + + L+ +Y + G+LK+ L + S+S
Sbjct: 91 FCR--HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM-----------SMS 137
Query: 105 TSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
Q + + A GL ++ + +IH+D+ + N L+ + KI+ G+SK
Sbjct: 138 WEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK 187
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ Y
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y++ EY G L FL
Sbjct: 227 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMG---------- 275
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL +
Sbjct: 276 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIE 332
Query: 158 QKEY 161
EY
Sbjct: 333 DNEY 336
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 34 ALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDWGDLKQFLLATRXXXXX 91
+ + +EI + KLDH +VVK++ + D D Y++ E + G + +
Sbjct: 79 PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV---------- 128
Query: 92 XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG 151
P ++ LS QA + G+E++ +++IH+DI N L+ D +KI+ G
Sbjct: 129 ------PTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFG 182
Query: 152 LSKD 155
+S +
Sbjct: 183 VSNE 186
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 24 AREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 83
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 84 LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 128
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 129 RDIKPENLLLGSAGELKIADFGWS 152
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ Y
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ Y
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ Y
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 34 ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
++ F E +L L H +V++ + +P Y++ E+ G L FL +
Sbjct: 50 SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL- 108
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P++ S Q+A G+ +I K IH+D+ A N L+S L KI+ GL+
Sbjct: 109 ----PKLIDFSA--------QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLA 156
Query: 154 KDTYQKEY 161
+ EY
Sbjct: 157 RVIEDNEY 164
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 30 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 89
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 90 LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS 158
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q +L K L ++ ++A H+ +RE+++ L H +++++ G D YL+
Sbjct: 53 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 112
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LEY G + + L ++ + T ++A L + KR+IH
Sbjct: 113 LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ S +KI+ G S
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWS 181
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 24/134 (17%)
Query: 16 QDTSVLMAKSLVHSKDD------EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
+D SV+ KSL+ + E EF+RE+ + L+H ++VK+ G+ +P ++
Sbjct: 42 KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMV 99
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR--L 127
+E+ GDL LL + + S + + +ALG+E++ ++ +
Sbjct: 100 MEFVPCGDLYHRLLD--------------KAHPIKWSVKLRLMLDIALGIEYMQNQNPPI 145
Query: 128 IHKDIAARNCLISS 141
+H+D+ + N + S
Sbjct: 146 VHRDLRSPNIFLQS 159
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIG-ICRDGDPHYLLLEYTDWGDLKQFLLATRXX 88
K+D F E + +L H+++V+++G I + Y++ EY G L +L +
Sbjct: 225 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS---- 280
Query: 89 XXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
R RS L + + V +E++ +H+D+AARN L+S D K+
Sbjct: 281 ----------RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 330
Query: 148 SLSGLSKD 155
S GL+K+
Sbjct: 331 SDFGLTKE 338
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 11 KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
KA D Q V + + + ++D+ REI L +L H ++V +I + L+
Sbjct: 39 KAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98
Query: 71 EYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
E+ + DLK+ L + L SQ YQ+ G+ H R++H+
Sbjct: 99 EFME-KDLKKVLDENKT--------------GLQDSQIKIYLYQLLRGVAHCHQHRILHR 143
Query: 131 DIAARNCLISSDLSVKISLSGLSK 154
D+ +N LI+SD ++K++ GL++
Sbjct: 144 DLKPQNLLINSDGALKLADFGLAR 167
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 24/134 (17%)
Query: 16 QDTSVLMAKSLVHSKDD------EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
+D SV+ KSL+ + E EF+RE+ + L+H ++VK+ G+ +P ++
Sbjct: 42 KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMV 99
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR--L 127
+E+ GDL LL + + S + + +ALG+E++ ++ +
Sbjct: 100 MEFVPCGDLYHRLLD--------------KAHPIKWSVKLRLMLDIALGIEYMQNQNPPI 145
Query: 128 IHKDIAARNCLISS 141
+H+D+ + N + S
Sbjct: 146 VHRDLRSPNIFLQS 159
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + K+ H +V++ + + +P Y++ EY G L FL
Sbjct: 60 FLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMG---------- 108
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 158 QKEY 161
EY
Sbjct: 166 DNEY 169
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 11 KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
KA D Q V + + + ++D+ REI L +L H ++V +I + L+
Sbjct: 39 KAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98
Query: 71 EYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
E+ + DLK+ L + L SQ YQ+ G+ H R++H+
Sbjct: 99 EFME-KDLKKVLDENKT--------------GLQDSQIKIYLYQLLRGVAHCHQHRILHR 143
Query: 131 DIAARNCLISSDLSVKISLSGLSK 154
D+ +N LI+SD ++K++ GL++
Sbjct: 144 DLKPQNLLINSDGALKLADFGLAR 167
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y++ EY G L FL
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETG---------- 274
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 275 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 158 QKEY 161
EY
Sbjct: 332 DNEY 335
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIG-ICRDGDPHYLLLEYTDWGDLKQFLLATRXX 88
K+D F E + +L H+++V+++G I + Y++ EY G L +L +
Sbjct: 53 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS---- 108
Query: 89 XXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
R RS L + + V +E++ +H+D+AARN L+S D K+
Sbjct: 109 ----------RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 158
Query: 148 SLSGLSKDT 156
S GL+K+
Sbjct: 159 SDFGLTKEA 167
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIG-ICRDGDPHYLLLEYTDWGDLKQFLLATRXX 88
K+D F E + +L H+++V+++G I + Y++ EY G L +L +
Sbjct: 44 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS---- 99
Query: 89 XXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
R RS L + + V +E++ +H+D+AARN L+S D K+
Sbjct: 100 ----------RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 149
Query: 148 SLSGLSKDT 156
S GL+K+
Sbjct: 150 SDFGLTKEA 158
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 30 KDDEALHEFKREIDLFCKLDHAHVVKMIG-ICRDGDPHYLLLEYTDWGDLKQFLLATRXX 88
K+D F E + +L H+++V+++G I + Y++ EY G L +L +
Sbjct: 38 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS---- 93
Query: 89 XXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
R RS L + + V +E++ +H+D+AARN L+S D K+
Sbjct: 94 ----------RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 143
Query: 148 SLSGLSKDT 156
S GL+K+
Sbjct: 144 SDFGLTKEA 152
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 31 DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXX 90
+ +L + RE+ + L+H ++VK+ + YL++EY G++ +L+A
Sbjct: 53 NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG---- 108
Query: 91 XXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
+ +A Q+ +++ K ++H+D+ A N L+ +D+++KI+
Sbjct: 109 -----------RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 157
Query: 151 GLSKD 155
G S +
Sbjct: 158 GFSNE 162
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 31 DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXX 90
+ +L + RE+ + L+H ++VK+ + YL++EY G++ +L+A
Sbjct: 53 NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG---- 108
Query: 91 XXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
+ +A Q+ +++ K ++H+D+ A N L+ +D+++KI+
Sbjct: 109 -----------RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 157
Query: 151 GLSKD 155
G S +
Sbjct: 158 GFSNE 162
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 31 DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXX 90
+ +L + RE+ + L+H ++VK+ + YL++EY G++ +L+A
Sbjct: 53 NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG---- 108
Query: 91 XXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
+ +A Q+ +++ K ++H+D+ A N L+ +D+++KI+
Sbjct: 109 -----------RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 157
Query: 151 GLSKD 155
G S +
Sbjct: 158 GFSNE 162
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y++ EY G L FL
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMG---------- 108
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 158 QKEY 161
EY
Sbjct: 166 DNEY 169
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 31 DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXX 90
+ +L + RE+ + L+H ++VK+ + YL++EY G++ +L+A
Sbjct: 53 NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG---- 108
Query: 91 XXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
+ +A Q+ +++ K ++H+D+ A N L+ +D+++KI+
Sbjct: 109 -----------RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 157
Query: 151 GLSKD 155
G S +
Sbjct: 158 GFSNE 162
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 31 DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXX 90
+ +L + RE+ + L+H ++VK+ + YL++EY G++ +L+A
Sbjct: 53 NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG---- 108
Query: 91 XXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
+ +A Q+ +++ K ++H+D+ A N L+ +D+++KI+
Sbjct: 109 -----------RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 157
Query: 151 GLSKD 155
G S +
Sbjct: 158 GFSNE 162
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ D DLK+F+ A+ P
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEHVD-QDLKKFMDAS-----ALTGIPLPL 107
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 108 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P Y++ EY + G L FL
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETG---------- 105
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ L Q V M+ Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 106 ---KYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 159
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 34 ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
+L + RE+ + L+H ++VK+ + YL++EY G++ +L+A
Sbjct: 57 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG------- 109
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+ +A Q+ +++ K ++H+D+ A N L+ D+++KI+ G S
Sbjct: 110 --------RMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
Query: 154 KD 155
+
Sbjct: 162 NE 163
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 33 EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL--------KQFLLA 84
EA+ +F RE++ LDH +++++ G+ P ++ E G L FLL
Sbjct: 57 EAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLG 115
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
T LS A QVA G+ ++ KR IH+D+AARN L+++
Sbjct: 116 T-----------------LS-----RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 153
Query: 145 VKISLSGLSKDTYQKE 160
VKI GL + Q +
Sbjct: 154 VKIGDFGLMRALPQND 169
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 33 EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL--------KQFLLA 84
EA+ +F RE++ LDH +++++ G+ P ++ E G L FLL
Sbjct: 63 EAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLG 121
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
T LS A QVA G+ ++ KR IH+D+AARN L+++
Sbjct: 122 T-----------------LS-----RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 159
Query: 145 VKISLSGLSKDTYQKE 160
VKI GL + Q +
Sbjct: 160 VKIGDFGLMRALPQND 175
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 33 EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL--------KQFLLA 84
EA+ +F RE++ LDH +++++ G+ P ++ E G L FLL
Sbjct: 63 EAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLG 121
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
T LS A QVA G+ ++ KR IH+D+AARN L+++
Sbjct: 122 T-----------------LS-----RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 159
Query: 145 VKISLSGLSKDTYQKE 160
VKI GL + Q +
Sbjct: 160 VKIGDFGLMRALPQND 175
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 33 EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL--------KQFLLA 84
EA+ +F RE++ LDH +++++ G+ P ++ E G L FLL
Sbjct: 53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLG 111
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
T LS A QVA G+ ++ KR IH+D+AARN L+++
Sbjct: 112 T-----------------LS-----RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 149
Query: 145 VKISLSGLSKDTYQKE 160
VKI GL + Q +
Sbjct: 150 VKIGDFGLMRALPQND 165
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 31 DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXX 90
+ +L + RE+ + L+H ++VK+ + YL++EY G++ +L+A
Sbjct: 46 NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGW--- 102
Query: 91 XXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
+ +A Q+ +++ K ++H+D+ A N L+ +D+++KI+
Sbjct: 103 ------------MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 150
Query: 151 GLSKD 155
G S +
Sbjct: 151 GFSNE 155
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 33 EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL--------KQFLLA 84
EA+ +F RE++ LDH +++++ G+ P ++ E G L FLL
Sbjct: 57 EAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLG 115
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
T LS A QVA G+ ++ KR IH+D+AARN L+++
Sbjct: 116 T-----------------LS-----RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 153
Query: 145 VKISLSGLSKDTYQKE 160
VKI GL + Q +
Sbjct: 154 VKIGDFGLMRALPQND 169
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 33 EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL--------KQFLLA 84
EA+ +F RE++ LDH +++++ G+ P ++ E G L FLL
Sbjct: 53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLG 111
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
T LS A QVA G+ ++ KR IH+D+AARN L+++
Sbjct: 112 T-----------------LS-----RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 149
Query: 145 VKISLSGLSKDTYQKE 160
VKI GL + Q +
Sbjct: 150 VKIGDFGLMRALPQND 165
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 33 EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL--------KQFLLA 84
EA+ +F RE++ LDH +++++ G+ P ++ E G L FLL
Sbjct: 53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLG 111
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
T LS A QVA G+ ++ KR IH+D+AARN L+++
Sbjct: 112 T-----------------LS-----RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 149
Query: 145 VKISLSGLSKDTYQKE 160
VKI GL + Q +
Sbjct: 150 VKIGDFGLMRALPQND 165
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 16/130 (12%)
Query: 25 SLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
S + SK+ E E +RE+ + + H ++V+ + Y++++Y + GDL + + A
Sbjct: 60 SRMSSKERE---ESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINA 116
Query: 85 TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
+ Q + Q+ L L+H+ D++++H+DI ++N ++ D +
Sbjct: 117 QKGVL-------------FQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT 163
Query: 145 VKISLSGLSK 154
V++ G+++
Sbjct: 164 VQLGDFGIAR 173
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 21/120 (17%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPH-----YLLLEYTDWGDLKQFLLATRXXXXXXXX 94
REI + +L+H HVVK++ I D Y++LE D D K+
Sbjct: 101 REIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVY------- 152
Query: 95 XXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
L+ T+ Y + +G++++ ++H+D+ NCL++ D SVK+ GL++
Sbjct: 153 --------LTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 105 IKS--------YLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 103
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 104 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 8 RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
+G+ D ++ + +A K L + +A E E + + +V +++GIC
Sbjct: 35 KGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ 94
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
L+ + +G L + R L + + Q+A G+ ++ D R
Sbjct: 95 -LVTQLMPYGCLLDHVRENRG--------------RLGSQDLLNWCMQIAKGMSYLEDVR 139
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
L+H+D+AARN L+ S VKI+ GL++ D + EY+
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH 177
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 103
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 104 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 103
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 104 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 103
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 104 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDAS-----ALTGIPLPL 105
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ N LI+++ ++K++ GL++
Sbjct: 106 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDAS-----ALTGIPLPL 107
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ N LI+++ ++K++ GL++
Sbjct: 108 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 105
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 106 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 105
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 106 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 58 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 111
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 112 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 106
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 107 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 103
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 104 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 107
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 108 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 106
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 107 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 108
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 109 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 58 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 111
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 112 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 105
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 106 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 108
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 109 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
H+ +RE+++ L H +++++ G D YL+LEY G + + L
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL------------- 99
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++ + T ++A L + K++IH+DI N L+ S +KI+ G S
Sbjct: 100 --QKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 107
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 108 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK F+ A+ P
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDAS-----ALTGIPLPL 107
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 108 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 48 LDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQ 107
LDHAH+V+++G+C G L+ +Y G L + R +L
Sbjct: 72 LDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRG--------------ALGPQL 116
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+ Q+A G+ ++ + ++H+++AARN L+ S V+++ G++
Sbjct: 117 LLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK F+ A+ P
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDAS-----ALTGIPLPL 106
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 107 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 48 LDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQ 107
LDHAH+V+++G+C G L+ +Y G L + R +L
Sbjct: 90 LDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRG--------------ALGPQL 134
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+ Q+A G+ ++ + ++H+++AARN L+ S V+++ G++
Sbjct: 135 LLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 105
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ N LI+++ ++K++ GL++
Sbjct: 106 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK+F+ A+ P
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 106
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ N LI+++ ++K++ GL++
Sbjct: 107 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F +E + KL H +V++ + + +P ++ EY G L FL
Sbjct: 50 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETG---------- 98
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++
Sbjct: 99 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 152
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 14/124 (11%)
Query: 33 EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXX 92
E ++EF RE+ + +L H ++V +G ++ EY G L + L +
Sbjct: 76 ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR---- 131
Query: 93 XXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLSVKISLS 150
L + ++MAY VA G+ ++ ++ ++H+D+ + N L+ +VK+
Sbjct: 132 --------EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDF 183
Query: 151 GLSK 154
GLS+
Sbjct: 184 GLSR 187
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK F+ A+ P
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKTFMDAS-----ALTGIPLPL 107
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 108 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK F+ A+ P
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEHVH-QDLKTFMDAS-----ALTGIPLPL 103
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ +N LI+++ ++K++ GL++
Sbjct: 104 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 14/115 (12%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L+H ++VK++ + + YL+ E+ DLK F+ A+ P
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKDFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++S +Q+ GL R++H+D+ N LI+++ ++K++ GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 24/153 (15%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F + KL H H+V G+C GD + L+ E+ +G L +L +
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK----------- 107
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI--------SSDLSVKISL 149
++ + +A Q+A + + + LIH ++ A+N L+ + +K+S
Sbjct: 108 ---NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164
Query: 150 SGLSKDTYQKEYYKYR--WVICSNIAEGRRLNV 180
G+S K+ + R WV I + LN+
Sbjct: 165 PGISITVLPKDILQERIPWVPPECIENPKNLNL 197
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 56 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 100
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 101 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 155
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 24/153 (15%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F + KL H H+V G+C GD + L+ E+ +G L +L +
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNK----------- 107
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI--------SSDLSVKISL 149
++ + +A Q+A + + + LIH ++ A+N L+ + +K+S
Sbjct: 108 ---NCINILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164
Query: 150 SGLSKDTYQKEYYKYR--WVICSNIAEGRRLNV 180
G+S K+ + R WV I + LN+
Sbjct: 165 PGISITVLPKDILQERIPWVPPECIENPKNLNL 197
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 58 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 102
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 103 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 157
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 59 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 103
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 104 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 158
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 57 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 101
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 102 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 156
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 122
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 123 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 177
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 63 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 107
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 108 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 162
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 122
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 123 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 177
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 123
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 124 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 178
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 126
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 127 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 181
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 126
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 127 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 181
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 125
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 126 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 125
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 126 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 123
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 124 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 178
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 125
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 126 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 123
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 124 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 178
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 123
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 124 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 178
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 84 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 128
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 129 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 183
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 125
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 126 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 125
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 126 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 15/125 (12%)
Query: 31 DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXX 90
+ +L + RE+ + L+H ++VK+ + YL+ EY G++ +L+A
Sbjct: 53 NSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHG---- 108
Query: 91 XXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
+A Q+ +++ K ++H+D+ A N L+ +D ++KI+
Sbjct: 109 -----------RXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADF 157
Query: 151 GLSKD 155
G S +
Sbjct: 158 GFSNE 162
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSK-DDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q+ ++ K L S+ + E + H+ +REI++ L H ++++M D YL+
Sbjct: 34 AREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 93
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LE+ G+L + L + ++ T ++A L + ++++IH
Sbjct: 94 LEFAPRGELYKELQ---------------KHGRFDEQRSATFMEELADALHYCHERKVIH 138
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ +KI+ G S
Sbjct: 139 RDIKPENLLMGYKGELKIADFGWS 162
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSK-DDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q+ ++ K L S+ + E + H+ +REI++ L H ++++M D YL+
Sbjct: 33 AREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LE+ G+L + L + ++ T ++A L + ++++IH
Sbjct: 93 LEFAPRGELYKELQ---------------KHGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ +KI+ G S
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWS 161
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 12 ASDPQDTSVLMAKSLVHSK-DDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A + Q+ ++ K L S+ + E + H+ +REI++ L H ++++M D YL+
Sbjct: 33 AREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
LE+ G+L + L + ++ T ++A L + ++++IH
Sbjct: 93 LEFAPRGELYKELQ---------------KHGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
+DI N L+ +KI+ G S
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWS 161
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G+L +++ +
Sbjct: 86 RERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIR---------------K 130
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 131 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 185
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 14/124 (11%)
Query: 33 EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXX 92
E ++EF RE+ + +L H ++V +G ++ EY G L + L +
Sbjct: 76 ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR---- 131
Query: 93 XXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLSVKISLS 150
L + ++MAY VA G+ ++ ++ ++H+++ + N L+ +VK+
Sbjct: 132 --------EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDF 183
Query: 151 GLSK 154
GLS+
Sbjct: 184 GLSR 187
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
EI + L H HVV G D D +++LE L + R
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL---------------HKRR 109
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL-SKDTYQK 159
++L+ +A Q+ LG +++ R+IH+D+ N ++ DL VKI GL +K Y
Sbjct: 110 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169
Query: 160 EYYKYRWVICSN 171
E K V+C
Sbjct: 170 ERKK---VLCGT 178
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
EI + L H HVV G D D +++LE L + R
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL---------------HKRR 133
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL-SKDTYQK 159
++L+ +A Q+ LG +++ R+IH+D+ N ++ DL VKI GL +K Y
Sbjct: 134 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 193
Query: 160 EYYKYRWVICSN 171
E K V+C
Sbjct: 194 ERKK---VLCGT 202
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
EI + L H HVV G D D +++LE L + R
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL---------------HKRR 135
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL-SKDTYQK 159
++L+ +A Q+ LG +++ R+IH+D+ N ++ DL VKI GL +K Y
Sbjct: 136 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195
Query: 160 EYYKYRWVICSN 171
E K V+C
Sbjct: 196 ERKK---VLCGT 204
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 15/113 (13%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
EI + L H HVV G D D +++LE L + R
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL---------------HKRR 111
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++L+ +A Q+ LG +++ R+IH+D+ N ++ DL VKI GL+
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 15/113 (13%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
EI + L H HVV G D D +++LE L + R
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL---------------HKRR 111
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++L+ +A Q+ LG +++ R+IH+D+ N ++ DL VKI GL+
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 97 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 97 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 52 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 98 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 15/113 (13%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
EI + L H HVV G D D +++LE L + R
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL---------------HKRR 115
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++L+ +A Q+ LG +++ R+IH+D+ N ++ DL VKI GL+
Sbjct: 116 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 34 ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
++ F E ++ L H +VK+ + +P Y++ E+ G L FL +
Sbjct: 53 SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL- 110
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P++ S Q+A G+ I + IH+D+ A N L+S+ L KI+ GL+
Sbjct: 111 ----PKLIDFSA--------QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 158
Query: 154 KDTYQKEY 161
+ EY
Sbjct: 159 RVIEDNEY 166
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 52 IKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 98 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 34 ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
++ F E ++ L H +VK+ + +P Y++ E+ G L FL +
Sbjct: 226 SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL- 283
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P++ S Q+A G+ I + IH+D+ A N L+S+ L KI+ GL+
Sbjct: 284 ----PKLIDFSA--------QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 331
Query: 154 KDTYQKEY 161
+ EY
Sbjct: 332 RVIEDNEY 339
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
+EIDL +L+H +V+K + + ++LE D GDL + + + +
Sbjct: 81 KEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFK------------K 128
Query: 100 VRSLSTSQAVTMAY-QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ L + V + Q+ LEH+ +R++H+DI N I++ VK+ GL +
Sbjct: 129 QKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR 184
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE++L KLDH +++K+ I D Y++ E G+L ++ +
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII---------------K 114
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLS 153
+ S A + QV G+ ++ ++H+D+ N L+ S D +KI GLS
Sbjct: 115 RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE++L KLDH +++K+ I D Y++ E G+L ++ +
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII---------------K 114
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLS 153
+ S A + QV G+ ++ ++H+D+ N L+ S D +KI GLS
Sbjct: 115 RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE++L KLDH +++K+ I D Y++ E G+L ++ +
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII---------------K 114
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLS 153
+ S A + QV G+ ++ ++H+D+ N L+ S D +KI GLS
Sbjct: 115 RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE D+ +LDH VK+ +D + Y L Y G L +++ +
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR---------------K 125
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ S + ++ LE++ K +IH+D+ N L++ D+ ++I+ G +K
Sbjct: 126 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 16 QDTSVLMAK--SLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
+T+V + K ++V +E +F +EI + K H ++V+++G DGD L+ Y
Sbjct: 47 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 106
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G L L LS +A A G+ + + IH+DI
Sbjct: 107 PNGSLLDRL------------SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIK 154
Query: 134 ARNCLISSDLSVKISLSGLSK 154
+ N L+ + KIS GL++
Sbjct: 155 SANILLDEAFTAKISDFGLAR 175
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 16 QDTSVLMAK--SLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
+T+V + K ++V +E +F +EI + K H ++V+++G DGD L+ Y
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G L L LS +A A G+ + + IH+DI
Sbjct: 113 PNGSLLDRL------------SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIK 160
Query: 134 ARNCLISSDLSVKISLSGLSK 154
+ N L+ + KIS GL++
Sbjct: 161 SANILLDEAFTAKISDFGLAR 181
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 16 QDTSVLMAK--SLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
+T+V + K ++V +E +F +EI + K H ++V+++G DGD L+ Y
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G L L LS +A A G+ + + IH+DI
Sbjct: 113 PNGSLLDRL------------SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIK 160
Query: 134 ARNCLISSDLSVKISLSGLSK 154
+ N L+ + KIS GL++
Sbjct: 161 SANILLDEAFTAKISDFGLAR 181
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 27/178 (15%)
Query: 16 QDTSVLMA-KSLVHSKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
+DT ++A K + S DD+ + + REI L +L H ++V ++ +C+ YL+ E+
Sbjct: 47 KDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV 106
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
D L L L +Q+ G+ +IH+DI
Sbjct: 107 DHTILDDLELFP---------------NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIK 151
Query: 134 ARNCLISSDLSVKISLSGLSK----------DTYQKEYYKYRWVICSNIAEGRRLNVF 181
N L+S VK+ G ++ D +Y+ ++ ++ G+ ++V+
Sbjct: 152 PENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVW 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 97 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 97 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 31/131 (23%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDG---DPH--------------YLLLEYTDWGDLKQF 81
+RE+ KLDH ++V G C DG DP ++ +E+ D G L+Q+
Sbjct: 52 EREVKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW 110
Query: 82 LLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
+ R L A+ + Q+ G+++I K+LI++D+ N +
Sbjct: 111 IEKRRG-------------EKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD 157
Query: 142 DLSVKISLSGL 152
VKI GL
Sbjct: 158 TKQVKIGDFGL 168
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 50 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 95
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 96 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 97 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 97 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 98 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 98 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 98 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 16 QDTSVLMAK--SLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
+T+V + K ++V +E +F +EI + K H ++V+++G DGD L+ Y
Sbjct: 44 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYX 103
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
G L L LS +A A G+ + + IH+DI
Sbjct: 104 PNGSLLDRL------------SCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDIK 151
Query: 134 ARNCLISSDLSVKISLSGLSK 154
+ N L+ + KIS GL++
Sbjct: 152 SANILLDEAFTAKISDFGLAR 172
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 98 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 97 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 97 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 97 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
K+EI + L+H +VVK G R+G+ YL LEY G+L + P
Sbjct: 52 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------EP 97
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+ + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 98 DI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 97 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 98 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 98 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 30/149 (20%)
Query: 24 KSLVHSKDD---EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ 80
K+ H D+ + + ++E LF L H +++ + G+C L++E+ G L +
Sbjct: 36 KAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNR 95
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDK---RLIHKDIAARNC 137
L R + V A Q+A G+ ++ D+ +IH+D+ + N
Sbjct: 96 VLSGKR----------------IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNI 139
Query: 138 LI-----SSDLS---VKISLSGLSKDTYQ 158
LI + DLS +KI+ GL+++ ++
Sbjct: 140 LILQKVENGDLSNKILKITDFGLAREWHR 168
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
K+EI + L+H +VVK G R+G+ YL LEY G+L +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P + + A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 97 PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
++EI + + D ++V K G G ++++EY G L
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL---------------- 112
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
R Q TM ++ GL+++ ++ IH+DI A N L+S VK++ G++
Sbjct: 113 RAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 19/129 (14%)
Query: 29 SKDDEALHE-FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRX 87
+K+ E HE EI L LDH +++K+ + D YL+ E+ + G+L + ++
Sbjct: 83 NKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR-- 140
Query: 88 XXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSDLS 144
A + Q+ G+ ++ ++H+DI N L+ +S L+
Sbjct: 141 -------------HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLN 187
Query: 145 VKISLSGLS 153
+KI GLS
Sbjct: 188 IKIVDFGLS 196
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 16 QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
++T ++A V + D L E +EI + + D HVVK G ++++EY
Sbjct: 51 KETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGA 108
Query: 76 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
G + + R ++L+ + T+ GLE++ R IH+DI A
Sbjct: 109 GSVSDIIRL--------------RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAG 154
Query: 136 NCLISSDLSVKISLSGLS 153
N L++++ K++ G++
Sbjct: 155 NILLNTEGHAKLADFGVA 172
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
Query: 29 SKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRX 87
K+DE + REI + +L H+++VK+ + L+ E+ D DLK+ L
Sbjct: 37 EKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEG 95
Query: 88 XXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
L + A + Q+ G+ + D+R++H+D+ +N LI+ + +KI
Sbjct: 96 --------------GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKI 141
Query: 148 SLSGLSK 154
+ GL++
Sbjct: 142 ADFGLAR 148
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
Query: 29 SKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRX 87
K+DE + REI + +L H+++VK+ + L+ E+ D DLK+ L
Sbjct: 37 EKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEG 95
Query: 88 XXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
L + A + Q+ G+ + D+R++H+D+ +N LI+ + +KI
Sbjct: 96 --------------GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKI 141
Query: 148 SLSGLSK 154
+ GL++
Sbjct: 142 ADFGLAR 148
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
Query: 29 SKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRX 87
K+DE + REI + +L H+++VK+ + L+ E+ D DLK+ L
Sbjct: 37 EKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEG 95
Query: 88 XXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
L + A + Q+ G+ + D+R++H+D+ +N LI+ + +KI
Sbjct: 96 --------------GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKI 141
Query: 148 SLSGLSK 154
+ GL++
Sbjct: 142 ADFGLAR 148
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 50 HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAV 109
H +++M G +D +++++Y + G+L L ++ A
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ---------------RFPNPVAK 109
Query: 110 TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
A +V L LE++ K +I++D+ N L+ + +KI+ G +K
Sbjct: 110 FYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAK 154
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
EI + LD+ HVV G D D Y++LE L + R
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL---------------HKRR 120
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++++ +A Q G++++ + R+IH+D+ N ++ D+ VKI GL+
Sbjct: 121 KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 34 ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
++ F E ++ L H +VK+ + +P Y++ E+ G L FL +
Sbjct: 220 SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL- 277
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
P++ S Q+A G+ I + IH+D+ A N L+S+ L KI+ GL+
Sbjct: 278 ----PKLIDFSA--------QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 325
Query: 154 K 154
+
Sbjct: 326 R 326
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
EI + LD+ HVV G D D Y++LE L + R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL---------------HKRR 136
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++++ +A Q G++++ + R+IH+D+ N ++ D+ VKI GL+
Sbjct: 137 KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
EI + LD+ HVV G D D Y++LE L + R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL---------------HKRR 136
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++++ +A Q G++++ + R+IH+D+ N ++ D+ VKI GL+
Sbjct: 137 KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
EI + LD+ HVV G D D Y++LE L + R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL---------------HKRR 136
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++++ +A Q G++++ + R+IH+D+ N ++ D+ VKI GL+
Sbjct: 137 KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
L+ T+ Y + LG + I + +IH+D+ NCL++ D SVKI GL++
Sbjct: 128 LTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 24 KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
K++ + + + + EI++ LDH +++K+ + D Y+++E + G+L + ++
Sbjct: 53 KTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIV 112
Query: 84 ATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---S 140
+ + R ++LS + Q+ L + + ++HKD+ N L S
Sbjct: 113 SAQA-----------RGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS 161
Query: 141 SDLSVKISLSGLSK 154
+KI GL++
Sbjct: 162 PHSPIKIIDFGLAE 175
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 16/118 (13%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
K+EI L +L H +V++++ + + + Y+++EY G +++ L +
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSV----------- 101
Query: 97 XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
P R QA Q+ GLE++ + ++HKDI N L+++ ++KIS G+++
Sbjct: 102 -PEKR-FPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAE 157
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 32 DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXX 91
D AL+ + EI++ KL+H ++K+ D + +Y++LE + G+L ++ +
Sbjct: 182 DPALN-VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK----- 234
Query: 92 XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKIS 148
L + YQ+ L ++++ + +IH+D+ N L+SS D +KI+
Sbjct: 235 ----------RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 284
Query: 149 LSGLSK 154
G SK
Sbjct: 285 DFGHSK 290
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 32 DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXX 91
D AL+ + EI++ KL+H ++K+ D + +Y++LE + G+L ++ +
Sbjct: 196 DPALN-VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK----- 248
Query: 92 XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKIS 148
L + YQ+ L ++++ + +IH+D+ N L+SS D +KI+
Sbjct: 249 ----------RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 298
Query: 149 LSGLSK 154
G SK
Sbjct: 299 DFGHSK 304
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 32 DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXX 91
D AL+ + EI++ KL+H ++K+ D + +Y++LE + G+L ++ +
Sbjct: 57 DPALN-VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK----- 109
Query: 92 XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKIS 148
L + YQ+ L ++++ + +IH+D+ N L+SS D +KI+
Sbjct: 110 ----------RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 159
Query: 149 LSGLSK 154
G SK
Sbjct: 160 DFGHSK 165
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 32 DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXX 91
D AL+ + EI++ KL+H ++K+ D + +Y++LE + G+L ++ +
Sbjct: 57 DPALN-VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK----- 109
Query: 92 XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKIS 148
L + YQ+ L ++++ + +IH+D+ N L+SS D +KI+
Sbjct: 110 ----------RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 159
Query: 149 LSGLSK 154
G SK
Sbjct: 160 DFGHSK 165
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 32 DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXX 91
D AL+ + EI++ KL+H ++K+ D + +Y++LE + G+L ++ +
Sbjct: 56 DPALN-VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK----- 108
Query: 92 XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKIS 148
L + YQ+ L ++++ + +IH+D+ N L+SS D +KI+
Sbjct: 109 ----------RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 158
Query: 149 LSGLSK 154
G SK
Sbjct: 159 DFGHSK 164
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 32 DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXX 91
D AL+ + EI++ KL+H ++K+ D + +Y++LE + G+L ++ +
Sbjct: 57 DPALN-VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK----- 109
Query: 92 XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKIS 148
L + YQ+ L ++++ + +IH+D+ N L+SS D +KI+
Sbjct: 110 ----------RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 159
Query: 149 LSGLSK 154
G SK
Sbjct: 160 DFGHSK 165
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 44/144 (30%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDG-----------------DPH-------------YL 68
+RE+ KLDH ++V G C DG DP ++
Sbjct: 53 EREVKALAKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFI 111
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
+E+ D G L+Q++ R L A+ + Q+ G+++I K+LI
Sbjct: 112 QMEFCDKGTLEQWIEKRRG-------------EKLDKVLALELFEQITKGVDYIHSKKLI 158
Query: 129 HKDIAARNCLISSDLSVKISLSGL 152
H+D+ N + VKI GL
Sbjct: 159 HRDLKPSNIFLVDTKQVKIGDFGL 182
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
L+ T+ Y + LG I + +IH+D+ NCL++ D SVK+ GL++
Sbjct: 126 LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 21/137 (15%)
Query: 20 VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
V+ + + D E+L RE+ L +LDH +++K+ D YL+ E G+L
Sbjct: 64 VISKRQVKQKTDKESLL---REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 120
Query: 80 QFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
+++ + S A + QV G+ ++ +++H+D+ N L+
Sbjct: 121 DEIISR---------------KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 165
Query: 140 SS---DLSVKISLSGLS 153
S D +++I GLS
Sbjct: 166 ESKSKDANIRIIDFGLS 182
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 32 DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXX 91
D AL+ + EI++ KL+H ++K+ D + +Y++LE + G+L ++ +
Sbjct: 63 DPALN-VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK----- 115
Query: 92 XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKIS 148
L + YQ+ L ++++ + +IH+D+ N L+SS D +KI+
Sbjct: 116 ----------RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 165
Query: 149 LSGLSK 154
G SK
Sbjct: 166 DFGHSK 171
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 19/135 (14%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
K E D+ ++H VVK+ + YL+L++ GDL TR
Sbjct: 78 KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL-----FTRLSKEV------- 125
Query: 99 RVRSLSTSQAVTMAY-QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ T + V ++ALGL+H+ +I++D+ N L+ + +K++ GLSK+
Sbjct: 126 ----MFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI 181
Query: 158 QKEYYKYRWVICSNI 172
E K + C +
Sbjct: 182 DHE--KKAYSFCGTV 194
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 21/137 (15%)
Query: 20 VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
V+ + + D E+L RE+ L +LDH +++K+ D YL+ E G+L
Sbjct: 58 VISKRQVKQKTDKESLL---REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 114
Query: 80 QFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
+++ + S A + QV G+ ++ +++H+D+ N L+
Sbjct: 115 DEIISR---------------KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 159
Query: 140 SS---DLSVKISLSGLS 153
S D +++I GLS
Sbjct: 160 ESKSKDANIRIIDFGLS 176
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
REI L +L H ++V++ + + L+ E+ D DLK+++ +
Sbjct: 52 REISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTP-------- 102
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
R L + +Q+ GL + +++H+D+ +N LI+ +K+ GL++
Sbjct: 103 -RGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRW 166
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL+ + K RW
Sbjct: 135 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE-------KSRW 185
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRW 166
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL+ + K RW
Sbjct: 127 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE-------KSRW 177
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRW 166
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL+ + K RW
Sbjct: 107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE-------KSRW 157
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 21/137 (15%)
Query: 20 VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
V+ + + D E+L RE+ L +LDH +++K+ D YL+ E G+L
Sbjct: 81 VISKRQVKQKTDKESLL---REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 137
Query: 80 QFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
+++ + S A + QV G+ ++ +++H+D+ N L+
Sbjct: 138 DEIISRKR---------------FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 182
Query: 140 SS---DLSVKISLSGLS 153
S D +++I GLS
Sbjct: 183 ESKSKDANIRIIDFGLS 199
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 21/137 (15%)
Query: 20 VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
V+ + + D E+L RE+ L +LDH +++K+ D YL+ E G+L
Sbjct: 82 VISKRQVKQKTDKESLL---REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 138
Query: 80 QFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
+++ + S A + QV G+ ++ +++H+D+ N L+
Sbjct: 139 DEIISRKR---------------FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 183
Query: 140 SS---DLSVKISLSGLS 153
S D +++I GLS
Sbjct: 184 ESKSKDANIRIIDFGLS 200
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 26/138 (18%)
Query: 35 LHEFKREIDLFC-KLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
L F+ E + C L +V + G R+G + +E + G L Q +
Sbjct: 109 LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQG------- 161
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--------- 144
L +A+ Q GLE++ +R++H D+ A N L+SSD S
Sbjct: 162 --------CLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGH 213
Query: 145 -VKISLSGLSKDTYQKEY 161
V + GL KD +Y
Sbjct: 214 AVCLQPDGLGKDLLTGDY 231
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
Y ++EY + GDL + +V AV A ++A+GL + K
Sbjct: 97 YFVMEYVNGGDLMYHIQ---------------QVGRFKEPHAVFYAAEIAIGLFFLQSKG 141
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDT 156
+I++D+ N ++ S+ +KI+ G+ K+
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 19/135 (14%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
K E D+ +++H +VK+ + YL+L++ GDL TR
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL-----FTRLSKEV------- 121
Query: 99 RVRSLSTSQAVTMAY-QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ T + V ++AL L+H+ +I++D+ N L+ + +K++ GLSK++
Sbjct: 122 ----MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177
Query: 158 QKEYYKYRWVICSNI 172
E Y + C +
Sbjct: 178 DHEKKAYSF--CGTV 190
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL+
Sbjct: 134 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL+
Sbjct: 135 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
+REI L H H++K+ + +++EY G+L +++ +
Sbjct: 57 EREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKK------------ 103
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++ + Q+ +E+ +++H+D+ N L+ +L+VKI+ GLS
Sbjct: 104 ---RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS 155
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 8/138 (5%)
Query: 17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
D +++ K L + +F+ E+++ H +++++ G C L+ Y G
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
+ L R P+ + ++ A +AY L D ++IH+D+ A N
Sbjct: 121 SVASCL---RERPESQPPLDWPKRQRIALGSARGLAY-----LHDHCDPKIIHRDVKAAN 172
Query: 137 CLISSDLSVKISLSGLSK 154
L+ + + GL+K
Sbjct: 173 ILLDEEFEAVVGDFGLAK 190
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL+
Sbjct: 107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL+
Sbjct: 112 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 19/135 (14%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
K E D+ +++H +VK+ + YL+L++ GDL TR
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL-----FTRLSKEV------- 121
Query: 99 RVRSLSTSQAVTMAY-QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ T + V ++AL L+H+ +I++D+ N L+ + +K++ GLSK++
Sbjct: 122 ----MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177
Query: 158 QKEYYKYRWVICSNI 172
E Y + C +
Sbjct: 178 DHEKKAYSF--CGTV 190
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 102 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+A+ Q+ GLEH+ + +I++D+ N L+ D +V+IS GL+
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 102 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+A+ Q+ GLEH+ + +I++D+ N L+ D +V+IS GL+
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL+
Sbjct: 112 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL+
Sbjct: 109 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 153
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
+REI L H H++K+ + + D +++EY +L +++
Sbjct: 52 EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRD------------ 98
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+S +A Q+ +E+ +++H+D+ N L+ L+VKI+ GLS
Sbjct: 99 ---KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 150
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL+
Sbjct: 107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 19/135 (14%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
K E D+ +++H +VK+ + YL+L++ GDL TR
Sbjct: 75 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL-----FTRLSKEV------- 122
Query: 99 RVRSLSTSQAVTMAY-QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
+ T + V ++AL L+H+ +I++D+ N L+ + +K++ GLSK++
Sbjct: 123 ----MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 178
Query: 158 QKEYYKYRWVICSNI 172
E Y + C +
Sbjct: 179 DHEKKAYSF--CGTV 191
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 102 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+A+ Q+ GLEH+ + +I++D+ N L+ D +V+IS GL+
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
+REI L H H++K+ + + D +++EY +L +++
Sbjct: 62 EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRD------------ 108
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+S +A Q+ +E+ +++H+D+ N L+ L+VKI+ GLS
Sbjct: 109 ---KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 160
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 102 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+A+ Q+ GLEH+ + +I++D+ N L+ D +V+IS GL+
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
+REI L H H++K+ + + D +++EY +L +++
Sbjct: 61 EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRD------------ 107
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+S +A Q+ +E+ +++H+D+ N L+ L+VKI+ GLS
Sbjct: 108 ---KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 159
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 35 LHEFKREIDLFC-KLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
L F+ E + C L +V + G R+G + +E + G L Q +
Sbjct: 107 LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----------- 155
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
++ L +A+ Q GLE++ +R++H D+ A N L+SSD S
Sbjct: 156 ----KQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS 202
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 35 LHEFKREIDLFC-KLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
L F+ E + C L +V + G R+G + +E + G L Q +
Sbjct: 109 LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----------- 157
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
++ L +A+ Q GLE++ +R++H D+ A N L+SSD S
Sbjct: 158 ----KQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS 204
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 35 LHEFKREIDLFC-KLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
L F+ E + C L +V + G R+G + +E + G L Q +
Sbjct: 93 LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----------- 141
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
++ L +A+ Q GLE++ +R++H D+ A N L+SSD S
Sbjct: 142 ----KQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS 188
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
+REI L H H++K+ + + D +++EY +L +++
Sbjct: 56 EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRD------------ 102
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+S +A Q+ +E+ +++H+D+ N L+ L+VKI+ GLS
Sbjct: 103 ---KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 154
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 21/137 (15%)
Query: 20 VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
V+ + + D E+L RE+ L +LDH ++ K+ D YL+ E G+L
Sbjct: 58 VISKRQVKQKTDKESLL---REVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELF 114
Query: 80 QFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
+++ + S A + QV G+ + +++H+D+ N L+
Sbjct: 115 DEIISRKR---------------FSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLL 159
Query: 140 SS---DLSVKISLSGLS 153
S D +++I GLS
Sbjct: 160 ESKSKDANIRIIDFGLS 176
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 20 VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
VL +V + D A K E ++ ++ H +V +I + G YL+LEY G+L
Sbjct: 52 VLKKAMIVRNAKDTA--HTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL- 108
Query: 80 QFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
F+ R A ++++ L H+ K +I++D+ N ++
Sbjct: 109 -FMQLEREGI-------------FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML 154
Query: 140 SSDLSVKISLSGLSKDT 156
+ VK++ GL K++
Sbjct: 155 NHQGHVKLTDFGLCKES 171
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 20 VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
VL +V + D A K E ++ ++ H +V +I + G YL+LEY G+L
Sbjct: 52 VLKKAMIVRNAKDTA--HTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL- 108
Query: 80 QFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
F+ R A ++++ L H+ K +I++D+ N ++
Sbjct: 109 -FMQLEREGI-------------FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML 154
Query: 140 SSDLSVKISLSGLSKDT 156
+ VK++ GL K++
Sbjct: 155 NHQGHVKLTDFGLCKES 171
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/131 (17%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 33 EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXX 92
+ + + +REI H H++K+ + ++++EY G+L ++
Sbjct: 58 DVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG------ 111
Query: 93 XXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL 152
L ++ + Q+ G+++ ++H+D+ N L+ + ++ KI+ GL
Sbjct: 112 ---------RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL 162
Query: 153 SKDTYQKEYYK 163
S E+ +
Sbjct: 163 SNMMSDGEFLR 173
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 107 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
Q + +A Q A G++++ K +IH+D+ + N + L+VKI GL+
Sbjct: 133 QLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA 179
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
Y ++EY + GDL + +V QAV A ++++GL + +
Sbjct: 96 YFVMEYVNGGDLMYHIQ---------------QVGKFKEPQAVFYAAEISIGLFFLHKRG 140
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKD 155
+I++D+ N ++ S+ +KI+ G+ K+
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKE 169
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 65/151 (43%), Gaps = 16/151 (10%)
Query: 18 TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD 77
T + +A ++ ++ + E K EI + +LDHA+++++ + L++EY D G+
Sbjct: 113 TGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172
Query: 78 LKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN- 136
L ++ +L+ + Q+ G+ H+ ++H D+ N
Sbjct: 173 LFDRIIDESY--------------NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENI 218
Query: 137 -CLISSDLSVKISLSGLSKDTYQKEYYKYRW 166
C+ +KI GL++ +E K +
Sbjct: 219 LCVNRDAKQIKIIDFGLARRYKPREKLKVNF 249
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 8/138 (5%)
Query: 17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
D ++ K L + +F+ E+++ H +++++ G C L+ Y G
Sbjct: 53 DGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 112
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
+ L R P+ + ++ A +AY L D ++IH+D+ A N
Sbjct: 113 SVASCL---RERPESQPPLDWPKRQRIALGSARGLAY-----LHDHCDPKIIHRDVKAAN 164
Query: 137 CLISSDLSVKISLSGLSK 154
L+ + + GL+K
Sbjct: 165 ILLDEEFEAVVGDFGLAK 182
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
H+ +REI++ L H +++++ D YL+LEY G+L + L +
Sbjct: 68 HQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS---------- 117
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
+ + T+ ++A L + K++IH+DI N
Sbjct: 118 -----CTFDEQRTATIMEELADALMYCHGKKVIHRDIKPEN 153
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 24/141 (17%)
Query: 27 VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHY-LLLEYTDWGDLKQFLLAT 85
V + + L FK E+ + K H +++ +G P ++ ++ + L L A+
Sbjct: 56 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK--PQLAIVTQWCEGSSLYHHLHAS 113
Query: 86 RXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV 145
+ + +A Q A G++++ K +IH+D+ + N + D +V
Sbjct: 114 ET--------------KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTV 159
Query: 146 KISLSGLSKDTYQKEYYKYRW 166
KI GL+ + K RW
Sbjct: 160 KIGDFGLATE-------KSRW 173
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 35 LHEFKREIDLFC-KLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
L F+ E + C L +V + G R+G + +E + G L Q +
Sbjct: 128 LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQG------- 180
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
L +A+ Q GLE++ +R++H D+ A N L+SSD S
Sbjct: 181 --------CLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGS 223
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 24/141 (17%)
Query: 27 VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHY-LLLEYTDWGDLKQFLLAT 85
V + + L FK E+ + K H +++ +G P ++ ++ + L L A+
Sbjct: 56 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--PQLAIVTQWCEGSSLYHHLHAS 113
Query: 86 RXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV 145
+ + +A Q A G++++ K +IH+D+ + N + D +V
Sbjct: 114 ET--------------KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTV 159
Query: 146 KISLSGLSKDTYQKEYYKYRW 166
KI GL+ + K RW
Sbjct: 160 KIGDFGLATE-------KSRW 173
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI +GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 36.2 bits (82), Expect = 0.012, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Query: 64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
D Y ++EY + GDL + +V AV A ++A+GL +
Sbjct: 415 DRLYFVMEYVNGGDLMYHI---------------QQVGRFKEPHAVFYAAEIAIGLFFLQ 459
Query: 124 DKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
K +I++D+ N ++ S+ +KI+ G+ K+
Sbjct: 460 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 19/151 (12%)
Query: 24 KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
+SL+H++ RE+ L L H +V+ ++ + T D + L
Sbjct: 58 QSLIHAR------RTYRELRLLKHLKHENVIGLLDVFTPA---------TSIEDFSEVYL 102
Query: 84 ATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
T + ++LS + YQ+ GL++I +IH+D+ N ++ D
Sbjct: 103 VTTLMGADLNNIV--KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC 160
Query: 144 SVKISLSGLSK--DTYQKEYYKYRWVICSNI 172
++I GL++ D Y RW I
Sbjct: 161 ELRILDFGLARQADEEMTGYVATRWYRAPEI 191
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ +G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/131 (19%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 33 EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXX 92
+ + + KREI H H++K+ + ++++EY G+L ++
Sbjct: 53 DVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK-------- 104
Query: 93 XXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL 152
RV + +A + Q+ +++ ++H+D+ N L+ + ++ KI+ GL
Sbjct: 105 ----HGRVEEM---EARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL 157
Query: 153 SKDTYQKEYYK 163
S E+ +
Sbjct: 158 SNMMSDGEFLR 168
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/131 (19%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 33 EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXX 92
+ + + KREI H H++K+ + ++++EY G+L ++
Sbjct: 53 DVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK-------- 104
Query: 93 XXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL 152
RV + +A + Q+ +++ ++H+D+ N L+ + ++ KI+ GL
Sbjct: 105 ----HGRVEEM---EARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL 157
Query: 153 SKDTYQKEYYK 163
S E+ +
Sbjct: 158 SNMMSDGEFLR 168
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ +G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ +G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 15/108 (13%)
Query: 49 DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQA 108
+H + M + + + ++EY + GDL + + S+A
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH---------------KFDLSRA 121
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
A ++ LGL+ + K ++++D+ N L+ D +KI+ G+ K+
Sbjct: 122 TFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 169
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 15/108 (13%)
Query: 49 DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQA 108
+H + M + + + ++EY + GDL + + S+A
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH---------------KFDLSRA 120
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
A ++ LGL+ + K ++++D+ N L+ D +KI+ G+ K+
Sbjct: 121 TFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 17/128 (13%)
Query: 27 VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHY-LLLEYTDWGDLKQFLLAT 85
V + + L FK E+ + K H +++ +G P ++ ++ + L L A+
Sbjct: 44 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK--PQLAIVTQWCEGSSLYHHLHAS 101
Query: 86 RXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV 145
+ + +A Q A G++++ K +IH+D+ + N + D +V
Sbjct: 102 ET--------------KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTV 147
Query: 146 KISLSGLS 153
KI GL+
Sbjct: 148 KIGDFGLA 155
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 50 HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAV 109
H +VV M GD ++++E+ + G L + TR ++ Q
Sbjct: 101 HDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR----------------MNEEQIA 144
Query: 110 TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL 152
T+ V L ++ ++ +IH+DI + + L++SD +K+S G
Sbjct: 145 TVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGF 187
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 15/116 (12%)
Query: 24 KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
+ L S+ + E +RE+++ ++ H +++ + I + L+LE G+L FL
Sbjct: 62 RRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA 121
Query: 84 ATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ KR+ H D+ N ++
Sbjct: 122 EK---------------ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML 162
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 16/115 (13%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
++EI + + D +V K G ++++EY G L
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---------------- 96
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
L +Q T+ ++ GL+++ ++ IH+DI A N L+S VK++ G++
Sbjct: 97 EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 16/115 (13%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
++EI + + D +V K G ++++EY G L
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---------------- 111
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
L +Q T+ ++ GL+++ ++ IH+DI A N L+S VK++ G++
Sbjct: 112 EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 19/151 (12%)
Query: 24 KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
+SL+H++ RE+ L L H +V+ ++ + T D + L
Sbjct: 66 QSLIHAR------RTYRELRLLKHLKHENVIGLLDVFTPA---------TSIEDFSEVYL 110
Query: 84 ATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
T + ++LS + YQ+ GL++I +IH+D+ N ++ D
Sbjct: 111 VTTLMGADLNNIV--KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS 168
Query: 144 SVKISLSGLSK--DTYQKEYYKYRWVICSNI 172
++I GL++ D Y RW I
Sbjct: 169 ELRILDFGLARQADEEMTGYVATRWYRAPEI 199
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 16/115 (13%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
++EI + + D +V K G ++++EY G L
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---------------- 116
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
L +Q T+ ++ GL+++ ++ IH+DI A N L+S VK++ G++
Sbjct: 117 EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 16/115 (13%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
++EI + + D +V K G ++++EY G L
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---------------- 96
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
L +Q T+ ++ GL+++ ++ IH+DI A N L+S VK++ G++
Sbjct: 97 EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 19/151 (12%)
Query: 24 KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
+SL+H++ RE+ L L H +V+ ++ + T D + L
Sbjct: 66 QSLIHAR------RTYRELRLLKHLKHENVIGLLDVFTPA---------TSIEDFSEVYL 110
Query: 84 ATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
T + ++LS + YQ+ GL++I +IH+D+ N ++ D
Sbjct: 111 VTTLMGADLNNIV--KSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS 168
Query: 144 SVKISLSGLSK--DTYQKEYYKYRWVICSNI 172
++I GL++ D Y RW I
Sbjct: 169 ELRILDFGLARQADEEMTGYVATRWYRAPEI 199
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 124 LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 15/116 (12%)
Query: 24 KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
+ L S+ + E +RE+++ ++ H +++ + I + L+LE G+L FL
Sbjct: 41 RRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA 100
Query: 84 ATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ KR+ H D+ N ++
Sbjct: 101 EK---------------ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML 141
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 20/123 (16%)
Query: 48 LDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQ 107
++ +VK+ +D Y+++EY G++ L R+ S
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR---------------RIGRFSEPH 142
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWV 167
A A Q+ L E++ LI++D+ N +I +K++ GL+K + W
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR-----TWX 197
Query: 168 ICS 170
+C
Sbjct: 198 LCG 200
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADP 176
Query: 155 ----DTYQKEYYKYRWVICSNI 172
+ EY RW I
Sbjct: 177 DHDHTGFLTEYVATRWYRAPEI 198
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 188
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 189 EMTGYVATRWYRAPEI 204
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 182
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 183 EMTGYVATRWYRAPEI 198
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 182
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 183 EMTGYVATRWYRAPEI 198
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 15/107 (14%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
+ KRE + L H H+V+++ Y++ E+ D DL F + R
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL-CFEIVKRADA------- 123
Query: 97 XPRVRSLSTSQAVTMAY--QVALGLEHISDKRLIHKDIAARNCLISS 141
S+AV Y Q+ L + D +IH+D+ N L++S
Sbjct: 124 -----GFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLAS 165
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 137 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADP 196
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 197 DHDHTGFLTEYVATRW 212
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADP 180
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 181 DHDHTGFLTEYVATRW 196
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 115 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 174
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 175 DHDHTGFLTEYVATRW 190
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 137 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 196
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 197 DHDHTGFLTEYVATRW 212
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
E +RE+++ ++ H +++ + I + L+LE G+L FL
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK---------- 109
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ KR+ H D+ N ++
Sbjct: 110 -----ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML 148
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADP 180
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 181 DHDHTGFLTEYVATRW 196
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 115 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 174
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 175 DHDHTGFLTEYVATRW 190
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 184 EMTGYVATRWYRAPEI 199
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADP 176
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 177 DHDHTGFLTEYVATRW 192
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 184 EMTGYVATRWYRAPEI 199
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADP 176
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 177 DHDHTGFLTEYVATRW 192
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 141 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 200
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 201 EMTGYVATRWYRAPEI 216
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 125 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 184
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 185 DHDHTGFLTEYVATRW 200
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 176
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 177 DHDHTGFLTEYVATRW 192
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 122 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 181
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 182 DHDHTGFLTEYVATRW 197
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 123 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 182
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 183 DHDHTGFLTEYVATRW 198
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 114 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 173
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 174 DHDHTGFLTEYVATRW 189
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 158
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
Query: 159 K--EYYKYRWVICSNI 172
+ Y RW I
Sbjct: 185 EMTGYVATRWYRAPEI 200
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 181 DHDHTGFLTEYVATRW 196
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 196
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 197 EMTGYVATRWYRAPEI 212
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 16/115 (13%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
++EI + + D ++ + G ++++EY G L
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL---------------- 108
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
+ L + T+ ++ GL+++ +R IH+DI A N L+S VK++ G++
Sbjct: 109 KPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 198 EMTGYVATRWYRAPEI 213
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 179
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 180 EMTGYVATRWYRAPEI 195
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 128 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 187
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 188 EMTGYVATRWYRAPEI 203
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 181 DHDHTGFLTEYVATRW 196
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 178
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 179 DHDHTGFLTEYVATRW 194
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 29/44 (65%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
M +Q+ GL+ + R++H+D+ +N L++S +K++ GL++
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 198 EMTGYVATRWYRAPEI 213
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 176
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 177 DHDHTGFLTEYVATRW 192
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 184 EMTGYVATRWYRAPEI 199
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 178
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 179 DHDHTGFLTEYVATRW 194
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 188
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 189 EMTGYVATRWYRAPEI 204
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 196
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 197 EMTGYVATRWYRAPEI 212
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 182
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 183 EMTGYVATRWYRAPEI 198
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 125 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 174
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 175 EMTGYVATRWYRAPEI 190
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 40 REIDLFCKLDHAHVVKMIGICR-DGDPH-------YLLLEYTDWGDLKQFLLATRXXXXX 91
REI + L H +VV +I ICR P+ YL+ ++ + DL L
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNV------ 118
Query: 92 XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG 151
+ + S+ + + GL +I +++H+D+ A N LI+ D +K++ G
Sbjct: 119 --------LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG 170
Query: 152 LSK 154
L++
Sbjct: 171 LAR 173
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 158
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
Query: 159 K--EYYKYRWVICSNI 172
+ Y RW I
Sbjct: 185 EMTGYVATRWYRAPEI 200
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 125 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 124 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 179
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 180 EMTGYVATRWYRAPEI 195
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 179
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 180 EMTGYVATRWYRAPEI 195
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 158
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
Query: 159 K--EYYKYRWVICSNI 172
+ Y RW I
Sbjct: 185 EMTGYVATRWYRAPEI 200
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 174
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 175 EMTGYVATRWYRAPEI 190
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 174 EMTGYVATRWYRAPEI 189
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 182
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 183 EMTGYVATRWYRAPEI 198
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 40 REIDLFCKLDHAHVVKMIGICR-DGDPH-------YLLLEYTDWGDLKQFLLATRXXXXX 91
REI + L H +VV +I ICR P+ YL+ ++ + DL L
Sbjct: 65 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNV------ 117
Query: 92 XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG 151
+ + S+ + + GL +I +++H+D+ A N LI+ D +K++ G
Sbjct: 118 --------LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG 169
Query: 152 LSK 154
L++
Sbjct: 170 LAR 172
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 116 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 175
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 176 EMTGYVATRWYRAPEI 191
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 117 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 176
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 177 EMTGYVATRWYRAPEI 192
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 184
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 185 EMTGYVATRWYRAPEI 200
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 174 EMTGYVATRWYRAPEI 189
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 29/44 (65%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
M +Q+ GL+ + R++H+D+ +N L++S +K++ GL++
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 29/44 (65%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
M +Q+ GL+ + R++H+D+ +N L++S +K++ GL++
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 60/143 (41%), Gaps = 21/143 (14%)
Query: 18 TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDH-AHVVKMIGICRDGDPH------YLLL 70
T L A ++ DE E K+EI++ K H ++ G +P +L++
Sbjct: 48 TGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVM 106
Query: 71 EYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
E+ G + + T+ +L + ++ GL H+ ++IH+
Sbjct: 107 EFCGAGSVTDLIKNTKG-------------NTLKEEWIAYICREILRGLSHLHQHKVIHR 153
Query: 131 DIAARNCLISSDLSVKISLSGLS 153
DI +N L++ + VK+ G+S
Sbjct: 154 DIKGQNVLLTENAEVKLVDFGVS 176
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 189
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 190 EMTGYVATRWYRAPEI 205
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 132 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 189
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 190 EMTGYVATRWYRAPEI 205
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 125 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 189
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 190 EMTGYVATRWYRAPEI 205
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 121 KCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 181 DHDHTGFLTEYVATRW 196
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 130 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
L S T+ +V GLE++ IH+D+ A N L+ D SV+I+ G+S
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 141 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 200
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 201 EMXGYVATRWYRAPEI 216
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 132 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 40 REIDLFCKLDHAHVVKMIGICR-DGDPH-------YLLLEYTDWGDLKQFLLATRXXXXX 91
REI + L H +VV +I ICR P+ YL+ ++ + DL L
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCE-HDLAGLLSNV------ 118
Query: 92 XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG 151
+ + S+ + + GL +I +++H+D+ A N LI+ D +K++ G
Sbjct: 119 --------LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG 170
Query: 152 LSK 154
L++
Sbjct: 171 LAR 173
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
L S T+ +V GLE++ IH+D+ A N L+ D SV+I+ G+S
Sbjct: 113 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 129 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 40 REIDLFCKLDHAHVVKMIGICR-DGDPH-------YLLLEYTDWGDLKQFLLATRXXXXX 91
REI + L H +VV +I ICR P+ YL+ ++ + DL L
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNV------ 118
Query: 92 XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG 151
+ + S+ + + GL +I +++H+D+ A N LI+ D +K++ G
Sbjct: 119 --------LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG 170
Query: 152 LSK 154
L++
Sbjct: 171 LAR 173
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 136 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/142 (19%), Positives = 60/142 (42%), Gaps = 31/142 (21%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPH------YLLLEYTDWGDLKQFLLATRXXXXXXX 93
RE+ + H +++ + I R P+ Y++L+ + DL Q + +++
Sbjct: 102 RELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQ------- 153
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
L+ YQ+ GL+++ ++IH+D+ N L++ + +KI G++
Sbjct: 154 --------PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMA 205
Query: 154 K---------DTYQKEYYKYRW 166
+ + EY RW
Sbjct: 206 RGLCTSPAEHQYFMTEYVATRW 227
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 132 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 15/79 (18%)
Query: 103 LSTSQAVTMA------YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-- 154
+ +SQ +T+ YQ+ GL+++ ++IH+D+ N L++ + +KI G+++
Sbjct: 150 IHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 209
Query: 155 -------DTYQKEYYKYRW 166
+ EY RW
Sbjct: 210 CTSPAEHQYFMTEYVATRW 228
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 133 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE+ L L HA++V + I L+ EY D DLKQ+L
Sbjct: 49 REVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNI----------- 96
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++ +Q+ GL + ++++H+D+ +N LI+ +K++ GL++
Sbjct: 97 ---INMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 147 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 206
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 207 EMTGYVATRWYRAPEI 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD 183
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 184 EMTGYVATRWYRAPEI 199
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD 179
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 180 EMTGYVATRWYRAPEI 195
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRWVI 168
+ YQ+ GL++I +IH+D+ N ++ D +KI GL++ D Y RW
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 185
Query: 169 CSNI 172
I
Sbjct: 186 APEI 189
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 20/129 (15%)
Query: 29 SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXX 88
S+ + LHE EI L L H ++V+ +G + + +E G L L +
Sbjct: 46 SRYSQPLHE---EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS---- 98
Query: 89 XXXXXXXXXPRVRSLSTSQAVTMAY--QVALGLEHISDKRLIHKDIAARNCLISSDLSV- 145
+ L ++ Y Q+ GL+++ D +++H+DI N LI++ V
Sbjct: 99 ----------KWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVL 148
Query: 146 KISLSGLSK 154
KIS G SK
Sbjct: 149 KISDFGTSK 157
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 18/116 (15%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
E+ + +LDH +++K+ D +YL++E G+L ++
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR--------------- 115
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLS 153
+ S A + QV G ++ ++H+D+ N L+ S D +KI GLS
Sbjct: 116 QKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E+ +++H ++VK+ G C +P L++EY + G L L
Sbjct: 49 FIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEP---------- 96
Query: 98 PRVRSLSTSQAVTMAYQVALG---LEHISDKRLIHKDIAARNCLISSDLSV 145
+ + + A++ Q + G L + K LIH+D+ N L+ + +V
Sbjct: 97 --LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV 145
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.3 bits (77), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADP 178
Query: 155 ----DTYQKEYYKYRW 166
+ EY RW
Sbjct: 179 DHDHTGFLTEYVATRW 194
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 34.3 bits (77), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 64/146 (43%), Gaps = 16/146 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYL 68
KA + + ++ K + DDE + REI L +L H ++V++ + L
Sbjct: 19 FKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTL 78
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
+ E+ D DLK++ + L + +Q+ GL + ++
Sbjct: 79 VFEFCD-QDLKKYFDSCNG--------------DLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+ +N LI+ + +K++ GL++
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 34.3 bits (77), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
F E+ +++H ++VK+ G C +P L++EY + G L L
Sbjct: 48 FIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEP---------- 95
Query: 98 PRVRSLSTSQAVTMAYQVALG---LEHISDKRLIHKDIAARNCLISSDLSV 145
+ + + A++ Q + G L + K LIH+D+ N L+ + +V
Sbjct: 96 --LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV 144
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 34.3 bits (77), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 20/129 (15%)
Query: 29 SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXX 88
S+ + LHE EI L L H ++V+ +G + + +E G L L +
Sbjct: 60 SRYSQPLHE---EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS---- 112
Query: 89 XXXXXXXXXPRVRSLSTSQAVTMAY--QVALGLEHISDKRLIHKDIAARNCLISSDLSV- 145
+ L ++ Y Q+ GL+++ D +++H+DI N LI++ V
Sbjct: 113 ----------KWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVL 162
Query: 146 KISLSGLSK 154
KIS G SK
Sbjct: 163 KISDFGTSK 171
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 171
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 33.9 bits (76), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ + LS YQ+ GL++I ++H+D+ N LI++ +KI GL++
Sbjct: 137 KSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLAR 192
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 195
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 33.9 bits (76), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 33.9 bits (76), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 122 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 177
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 33.9 bits (76), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 64/146 (43%), Gaps = 16/146 (10%)
Query: 10 LKASDPQDTSVLMAKSLVHSKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYL 68
KA + + ++ K + DDE + REI L +L H ++V++ + L
Sbjct: 19 FKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTL 78
Query: 69 LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
+ E+ D DLK++ + L + +Q+ GL + ++
Sbjct: 79 VFEFCD-QDLKKYFDSCNG--------------DLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
H+D+ +N LI+ + +K++ GL++
Sbjct: 124 HRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.9 bits (76), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 18/116 (15%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
E+ + +LDH +++K+ D +YL++E G+L ++
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR--------------- 98
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLS 153
+ S A + QV G ++ ++H+D+ N L+ S D +KI GLS
Sbjct: 99 QKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.5 bits (75), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 23/153 (15%)
Query: 11 KASDPQDTSVLMAKSLVHSKDDEALH-EFKREIDLFCKLD---HAHVVKMIGICRDGDPH 66
KA DP + KS+ +E L RE+ L +L+ H +VV+++ +C
Sbjct: 22 KARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD 81
Query: 67 -----YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEH 121
L+ E+ D DL+ +L L + Q GL+
Sbjct: 82 REIKVTLVFEHVDQ-DLRTYLDKAPPP-------------GLPAETIKDLMRQFLRGLDF 127
Query: 122 ISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ ++H+D+ N L++S +VK++ GL++
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.5 bits (75), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 23/153 (15%)
Query: 11 KASDPQDTSVLMAKSLVHSKDDEALH-EFKREIDLFCKLD---HAHVVKMIGICRDGDPH 66
KA DP + KS+ +E L RE+ L +L+ H +VV+++ +C
Sbjct: 22 KARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD 81
Query: 67 -----YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEH 121
L+ E+ D DL+ +L L + Q GL+
Sbjct: 82 REIKVTLVFEHVDQ-DLRTYLDKAPPP-------------GLPAETIKDLMRQFLRGLDF 127
Query: 122 ISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ ++H+D+ N L++S +VK++ GL++
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.5 bits (75), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 23/153 (15%)
Query: 11 KASDPQDTSVLMAKSLVHSKDDEALH-EFKREIDLFCKLD---HAHVVKMIGICRDGDPH 66
KA DP + KS+ +E L RE+ L +L+ H +VV+++ +C
Sbjct: 22 KARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD 81
Query: 67 -----YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEH 121
L+ E+ D DL+ +L L + Q GL+
Sbjct: 82 REIKVTLVFEHVDQ-DLRTYLDKAPPP-------------GLPAETIKDLMRQFLRGLDF 127
Query: 122 ISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
+ ++H+D+ N L++S +VK++ GL++
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 33.5 bits (75), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 16/120 (13%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
+ KRE + L H H+V+++ Y++ E+ D DL F + R
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL-CFEIVKRADA------- 123
Query: 97 XPRVRSLSTSQAVTMAY--QVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGLS 153
S+AV Y Q+ L + D +IH+D+ L++S + S + L G
Sbjct: 124 -----GFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG 178
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 33.5 bits (75), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 112 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 160
A ++ LGLEH+ ++ ++++D+ N L+ V+IS GL+ D +K+
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 33.5 bits (75), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 112 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 160
A ++ LGLEH+ ++ ++++D+ N L+ V+IS GL+ D +K+
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 112 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 160
A ++ LGLEH+ ++ ++++D+ N L+ V+IS GL+ D +K+
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 33.1 bits (74), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 16/120 (13%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
+ KRE + L H H+V+++ Y++ E+ D DL F + R
Sbjct: 74 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL-CFEIVKRADA------- 125
Query: 97 XPRVRSLSTSQAVTMAY--QVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGLS 153
S+AV Y Q+ L + D +IH+D+ L++S + S + L G
Sbjct: 126 -----GFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG 180
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 33.1 bits (74), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 112 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 160
A ++ LGLEH+ ++ ++++D+ N L+ V+IS GL+ D +K+
Sbjct: 297 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 345
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 33.1 bits (74), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 31 DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG-DLKQFLLATRXXX 89
+D L + EI + +++HA+++K++ I + L++E G DL F+
Sbjct: 69 EDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFI------- 121
Query: 90 XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
PR L A + Q+ + ++ K +IH+DI N +I+ D ++K+
Sbjct: 122 -----DRHPR---LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKL 171
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 33.1 bits (74), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL + D
Sbjct: 118 KSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 33.1 bits (74), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 21/143 (14%)
Query: 16 QDTSVLMA-KSLVHSKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
+DT ++A K + S+DD + + REI + +L H ++V ++ + R +L+ EY
Sbjct: 25 RDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC 84
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLS--TSQAVTMAYQVALGLEHISDKRLIHKD 131
D L + R V+S++ T QAV ++ IH+D
Sbjct: 85 DHTVLHELDRYQRGVPEHL-------VKSITWQTLQAVNFCHK----------HNCIHRD 127
Query: 132 IAARNCLISSDLSVKISLSGLSK 154
+ N LI+ +K+ G ++
Sbjct: 128 VKPENILITKHSVIKLCDFGFAR 150
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/104 (20%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
E +RE+ + ++ H +++ + + + L+LE G+L FL
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL------------- 106
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
+ SLS +A + Q+ G+ ++ K++ H D+ N ++
Sbjct: 107 --AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 16/117 (13%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
K EI + +L H ++ + D L+LE+ G+L + A
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY----------- 144
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN--CLISSDLSVKISLSGLS 153
+S ++ + Q GL+H+ + ++H DI N C SVKI GL+
Sbjct: 145 ---KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
E +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-------------- 106
Query: 97 XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
+ SLS +A + Q+ G+ ++ K++ H D+ N ++
Sbjct: 107 -AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
E +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-------------- 106
Query: 97 XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
+ SLS +A + Q+ G+ ++ K++ H D+ N ++
Sbjct: 107 -AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
E +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL------------- 106
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
+ SLS +A + Q+ G+ ++ K++ H D+ N ++
Sbjct: 107 --AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
E +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL------------- 106
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
+ SLS +A + Q+ G+ ++ K++ H D+ N ++
Sbjct: 107 --AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 37 EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
E +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-------------- 106
Query: 97 XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
+ SLS +A + Q+ G+ ++ K++ H D+ N ++
Sbjct: 107 -AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRW 166
+ YQ+ GL++I ++H+D+ N ++ D +KI GL++ D Y RW
Sbjct: 149 LVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRW 206
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE+ L +L H +++++ + +L+ EY + DLK+++ P
Sbjct: 82 REVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYM------------DKNPD 128
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-SDLS----VKISLSGLSK 154
V S + YQ+ G+ +R +H+D+ +N L+S SD S +KI GL++
Sbjct: 129 V---SMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 32/139 (23%)
Query: 31 DDEALHEFKREIDLFCKLDHAHVVKM--------------IGICRDGDPHYLLLEYTDWG 76
D +++ REI + +LDH ++VK+ +G + + Y++ EY +
Sbjct: 48 DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-T 106
Query: 77 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
DL L L A YQ+ GL++I ++H+D+ N
Sbjct: 107 DLANVL----------------EQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN 150
Query: 137 CLISS-DLSVKISLSGLSK 154
I++ DL +KI GL++
Sbjct: 151 LFINTEDLVLKIGDFGLAR 169
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 111 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRW 166
+ YQ+ GL++I ++H+D+ N ++ D +KI GL++ D Y RW
Sbjct: 131 LVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRW 188
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/170 (18%), Positives = 72/170 (42%), Gaps = 20/170 (11%)
Query: 16 QDTSVLMAKSLVHSKDDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
+ + ++MA+ L+H + A+ ++ RE+ + + + ++V G + +E+ D
Sbjct: 31 KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 90
Query: 75 WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIA 133
G L Q L + + ++ V GL ++ +K +++H+D+
Sbjct: 91 GGSLDQVL---------------KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 135
Query: 134 ARNCLISSDLSVKI---SLSGLSKDTYQKEYYKYRWVICSNIAEGRRLNV 180
N L++S +K+ +SG D E+ R + +G +V
Sbjct: 136 PSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSV 185
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 15/110 (13%)
Query: 33 EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXX 92
E + FK+EI++ LDH +++++ D YL++E G+L + ++ R
Sbjct: 48 EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV----- 102
Query: 93 XXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
S A + V + + + H+D+ N L +D
Sbjct: 103 ----------FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD 142
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 15/110 (13%)
Query: 33 EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXX 92
E + FK+EI++ LDH +++++ D YL++E G+L + ++ R
Sbjct: 65 EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV----- 119
Query: 93 XXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
S A + V + + + H+D+ N L +D
Sbjct: 120 ----------FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD 159
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
R R + +A ++ LE++ + ++++DI N ++ D +KI+ GL K+
Sbjct: 98 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE 154
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
R R + +A ++ LE++ + ++++DI N ++ D +KI+ GL K+
Sbjct: 103 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE 159
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 16 QDTSVLMAKSLVHSKDDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
+ + ++MA+ L+H + A+ ++ RE+ + + + ++V G + +E+ D
Sbjct: 38 RPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 97
Query: 75 WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIA 133
G L Q L + + ++ V GL ++ +K +++H+D+
Sbjct: 98 GGSLDQVL---------------KEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVK 142
Query: 134 ARNCLISSDLSVKISLSGLS 153
N L++S +K+ G+S
Sbjct: 143 PSNILVNSRGEIKLCDFGVS 162
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 31.6 bits (70), Expect = 0.26, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 29/48 (60%)
Query: 106 SQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++AV A ++ GLE + +R++++D+ N L+ ++IS GL+
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 31.6 bits (70), Expect = 0.26, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 29/48 (60%)
Query: 106 SQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++AV A ++ GLE + +R++++D+ N L+ ++IS GL+
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 11/115 (9%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
RE+ L + H +V+ ++ + P L ++TD+ + F+ R
Sbjct: 73 RELRLLKHMRHENVIGLLDVFT---PDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR 129
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
++ L YQ+ GL +I +IH+D+ N ++ D +KI GL++
Sbjct: 130 IQFL--------VYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
R R + +A ++ LE++ + ++++DI N ++ D +KI+ GL K+
Sbjct: 98 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE 154
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
R R + +A ++ LE++ + ++++DI N ++ D +KI+ GL K+
Sbjct: 98 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE 154
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
R R + +A ++ LE++ + ++++DI N ++ D +KI+ GL K+
Sbjct: 98 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE 154
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
R R + +A ++ LE++ + ++++DI N ++ D +KI+ GL K+
Sbjct: 98 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE 154
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 43/101 (42%), Gaps = 14/101 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHY--LLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
RE ++ KL+H ++VK+ I + + L++E+ G L L
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL------------EEP 103
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL 138
L S+ + + V G+ H+ + ++H++I N +
Sbjct: 104 SNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 18/117 (15%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
E+ + LDH +++K+ D +YL++E G+L ++ R
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH--------------R 130
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLS 153
++ AV + QV G+ ++ ++H+D+ N L+ S D +KI GLS
Sbjct: 131 MKFNEVDAAVIIK-QVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
R R + +A ++ LE++ + ++++DI N ++ D +KI+ GL K+
Sbjct: 101 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE 157
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 156
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI L++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDD 177
Query: 157 YQKEYYKYRWVICSNI 172
Y RW I
Sbjct: 178 EMTGYVATRWYRAPEI 193
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 16 QDTSVLMAKSLVHSKDDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
+ + ++MA+ L+H + A+ ++ RE+ + + + ++V G + +E+ D
Sbjct: 47 KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 106
Query: 75 WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIA 133
G L Q L + + ++ V GL ++ +K +++H+D+
Sbjct: 107 GGSLDQVL---------------KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 151
Query: 134 ARNCLISSDLSVKISLSGLS 153
N L++S +K+ G+S
Sbjct: 152 PSNILVNSRGEIKLCDFGVS 171
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 43/101 (42%), Gaps = 14/101 (13%)
Query: 40 REIDLFCKLDHAHVVKMIGICRDGDPHY--LLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
RE ++ KL+H ++VK+ I + + L++E+ G L L
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL------------EEP 103
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL 138
L S+ + + V G+ H+ + ++H++I N +
Sbjct: 104 SNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 16 QDTSVLMAKSLVHSKDDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
+ + ++MA+ L+H + A+ ++ RE+ + + + ++V G + +E+ D
Sbjct: 90 KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 149
Query: 75 WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIA 133
G L Q L + + ++ V GL ++ +K +++H+D+
Sbjct: 150 GGSLDQVLK---------------KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 194
Query: 134 ARNCLISSDLSVKISLSGLS 153
N L++S +K+ G+S
Sbjct: 195 PSNILVNSRGEIKLCDFGVS 214
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 16 QDTSVLMAKSLVHSKDDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
+ + ++MA+ L+H + A+ ++ RE+ + + + ++V G + +E+ D
Sbjct: 28 KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 87
Query: 75 WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIA 133
G L Q L + + ++ V GL ++ +K +++H+D+
Sbjct: 88 GGSLDQVL---------------KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 132
Query: 134 ARNCLISSDLSVKISLSGLS 153
N L++S +K+ G+S
Sbjct: 133 PSNILVNSRGEIKLCDFGVS 152
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 16 QDTSVLMAKSLVHSKDDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
+ + ++MA+ L+H + A+ ++ RE+ + + + ++V G + +E+ D
Sbjct: 28 KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 87
Query: 75 WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIA 133
G L Q L + + ++ V GL ++ +K +++H+D+
Sbjct: 88 GGSLDQVL---------------KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 132
Query: 134 ARNCLISSDLSVKISLSGLS 153
N L++S +K+ G+S
Sbjct: 133 PSNILVNSRGEIKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 16 QDTSVLMAKSLVHSKDDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
+ + ++MA+ L+H + A+ ++ RE+ + + + ++V G + +E+ D
Sbjct: 28 KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 87
Query: 75 WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIA 133
G L Q L + + ++ V GL ++ +K +++H+D+
Sbjct: 88 GGSLDQVL---------------KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 132
Query: 134 ARNCLISSDLSVKISLSGLS 153
N L++S +K+ G+S
Sbjct: 133 PSNILVNSRGEIKLCDFGVS 152
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 16 QDTSVLMAKSLVHSKDDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
+ + ++MA+ L+H + A+ ++ RE+ + + + ++V G + +E+ D
Sbjct: 28 KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 87
Query: 75 WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIA 133
G L Q L + + ++ V GL ++ +K +++H+D+
Sbjct: 88 GGSLDQVL---------------KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 132
Query: 134 ARNCLISSDLSVKISLSGLS 153
N L++S +K+ G+S
Sbjct: 133 PSNILVNSRGEIKLCDFGVS 152
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 16 QDTSVLMAKSLVHSKDDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
+ + ++MA+ L+H + A+ ++ RE+ + + + ++V G + +E+ D
Sbjct: 55 KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 114
Query: 75 WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIA 133
G L Q L + + ++ V GL ++ +K +++H+D+
Sbjct: 115 GGSLDQVL---------------KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 159
Query: 134 ARNCLISSDLSVKISLSGLS 153
N L++S +K+ G+S
Sbjct: 160 PSNILVNSRGEIKLCDFGVS 179
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 16 QDTSVLMAKSLVHSKDDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
+ + ++MA+ L+H + A+ ++ RE+ + + + ++V G + +E+ D
Sbjct: 28 KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 87
Query: 75 WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIA 133
G L Q L + + ++ V GL ++ +K +++H+D+
Sbjct: 88 GGSLDQVL---------------KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 132
Query: 134 ARNCLISSDLSVKISLSGLS 153
N L++S +K+ G+S
Sbjct: 133 PSNILVNSRGEIKLCDFGVS 152
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 114 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
++ L LEH+ +I++DI N L+ S+ V ++ GLSK+
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/129 (19%), Positives = 53/129 (41%), Gaps = 16/129 (12%)
Query: 35 LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXX 94
L K EI+ L H H+ ++ + + +++LEY G+L ++++
Sbjct: 52 LPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ--------- 102
Query: 95 XXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL-S 153
LS + + Q+ + ++ + H+D+ N L +K+ GL +
Sbjct: 103 ------DRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCA 156
Query: 154 KDTYQKEYY 162
K K+Y+
Sbjct: 157 KPKGNKDYH 165
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 17/142 (11%)
Query: 12 ASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A D +++ V+ K + +S + +E + +E+ KL H + ++ G +L+
Sbjct: 34 ARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
+EY G L + + L + + + GL ++ +IH
Sbjct: 94 MEYC-LGSASDLLEVHK--------------KPLQEVEIAAVTHGALQGLAYLHSHNMIH 138
Query: 130 KDIAARNCLISSDLSVKISLSG 151
+D+ A N L+S VK+ G
Sbjct: 139 RDVKAGNILLSEPGLVKLGDFG 160
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 16/112 (14%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
E+ + H +VV+M GD ++++E+ + G L + TR
Sbjct: 78 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-------------- 123
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL 152
++ Q + V L + + +IH+DI + + L++ D VK+S G
Sbjct: 124 --MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 173
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 16/112 (14%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
E+ + H +VV+M GD ++++E+ + G L + TR
Sbjct: 76 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-------------- 121
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL 152
++ Q + V L + + +IH+DI + + L++ D VK+S G
Sbjct: 122 --MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 171
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 16/112 (14%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
E+ + H +VV+M GD ++++E+ + G L + TR
Sbjct: 67 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-------------- 112
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL 152
++ Q + V L + + +IH+DI + + L++ D VK+S G
Sbjct: 113 --MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 162
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 16/112 (14%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
E+ + H +VV+M GD ++++E+ + G L + TR
Sbjct: 121 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-------------- 166
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL 152
++ Q + V L + + +IH+DI + + L++ D VK+S G
Sbjct: 167 --MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 216
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 16/112 (14%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
E+ + H +VV+M GD ++++E+ + G L + TR
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------- 250
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL 152
AV +A AL + H +IH+DI + + L++ D VK+S G
Sbjct: 251 -------AVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGF 293
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 16/112 (14%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
E+ + H +VV+M GD ++++E+ + G L + TR
Sbjct: 71 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-------------- 116
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL 152
++ Q + V L + + +IH+DI + + L++ D VK+S G
Sbjct: 117 --MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 166
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 23/35 (65%)
Query: 107 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
+++ Q+A G+ H+ ++IH+D+ +N L+S+
Sbjct: 134 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 168
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 23/35 (65%)
Query: 107 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
+++ Q+A G+ H+ ++IH+D+ +N L+S+
Sbjct: 134 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 168
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 23/35 (65%)
Query: 107 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
+++ Q+A G+ H+ ++IH+D+ +N L+S+
Sbjct: 116 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 150
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 30.4 bits (67), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 23/35 (65%)
Query: 107 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
+++ Q+A G+ H+ ++IH+D+ +N L+S+
Sbjct: 116 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 150
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 30.4 bits (67), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 20/124 (16%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
E+ + H +VV+M G+ ++L+E+ G L + R
Sbjct: 92 EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR-------------- 137
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG----LSKDT 156
L+ Q T+ V L ++ + +IH+DI + + L++ D VK+S G +SKD
Sbjct: 138 --LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV 195
Query: 157 YQKE 160
+++
Sbjct: 196 PKRK 199
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 17/142 (11%)
Query: 12 ASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
A D +++ V+ K + +S + +E + +E+ KL H + ++ G +L+
Sbjct: 73 ARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132
Query: 70 LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
+EY G L + + L + + + GL ++ +IH
Sbjct: 133 MEYC-LGSASDLLEVHK--------------KPLQEVEIAAVTHGALQGLAYLHSHNMIH 177
Query: 130 KDIAARNCLISSDLSVKISLSG 151
+D+ A N L+S VK+ G
Sbjct: 178 RDVKAGNILLSEPGLVKLGDFG 199
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 30.4 bits (67), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Query: 40 REIDLFCKLD-HAHVVKMIGICR-DGDPH-YLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
REI + +L H ++V ++ + R D D YL+ +Y + DL +
Sbjct: 57 REIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVI-------------- 101
Query: 97 XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
R L + YQ+ ++++ L+H+D+ N L++++ VK++ GLS+
Sbjct: 102 --RANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 18/119 (15%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
+ EI + K+ H ++V + I G YL+++ G+L ++
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF----------- 112
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL---ISSDLSVKISLSGLSK 154
+ A + +QV ++++ D ++H+D+ N L + D + IS GLSK
Sbjct: 113 ----YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 114 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 158
Q+ L +I + +IH+D+ N I +VKI GL+K+ ++
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 18/119 (15%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
+ EI + K+ H ++V + I G YL+++ G+L ++
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF----------- 112
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL---ISSDLSVKISLSGLSK 154
+ A + +QV ++++ D ++H+D+ N L + D + IS GLSK
Sbjct: 113 ----YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 114 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 158
Q+ L +I + +IH+D+ N I +VKI GL+K+ ++
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 18/119 (15%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
+ EI + K+ H ++V + I G YL+++ G+L ++
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF----------- 112
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL---ISSDLSVKISLSGLSK 154
+ A + +QV ++++ D ++H+D+ N L + D + IS GLSK
Sbjct: 113 ----YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 18/119 (15%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
+ EI + K+ H ++V + I G YL+++ G+L ++
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF----------- 112
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL---ISSDLSVKISLSGLSK 154
+ A + +QV ++++ D ++H+D+ N L + D + IS GLSK
Sbjct: 113 ----YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 30.0 bits (66), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 20/107 (18%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDG-------DPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
EI + KL+H +VV + DG D L +EY + GDL+++L
Sbjct: 62 EIQIMKKLNHPNVVSAREV-PDGLQKLAPNDLPLLAMEYCEGGDLRKYL----------- 109
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
L T+ ++ L ++ + R+IH+D+ N ++
Sbjct: 110 -NQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQ 155
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 30.0 bits (66), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 20/107 (18%)
Query: 41 EIDLFCKLDHAHVVKMIGICRDG-------DPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
EI + KL+H +VV + DG D L +EY + GDL+++L
Sbjct: 63 EIQIMKKLNHPNVVSAREV-PDGLQKLAPNDLPLLAMEYCEGGDLRKYL----------- 110
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
L T+ ++ L ++ + R+IH+D+ N ++
Sbjct: 111 -NQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQ 156
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 30.0 bits (66), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 63 GDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHI 122
GD ++++EY G L + T + Q + + LE +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTET----------------CMDEGQIAAVCRECLQALEFL 132
Query: 123 SDKRLIHKDIAARNCLISSDLSVKISLSGL 152
++IH+DI + N L+ D SVK++ G
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGF 162
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 30.0 bits (66), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 63 GDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHI 122
GD ++++EY G L + T + Q + + LE +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTET----------------CMDEGQIAAVCRECLQALEFL 132
Query: 123 SDKRLIHKDIAARNCLISSDLSVKISLSGL 152
++IH+DI + N L+ D SVK++ G
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGF 162
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 30.0 bits (66), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 63 GDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHI 122
GD ++++EY G L + T + Q + + LE +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTET----------------CMDEGQIAAVCRECLQALEFL 132
Query: 123 SDKRLIHKDIAARNCLISSDLSVKISLSGL 152
++IH+DI + N L+ D SVK++ G
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGF 162
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 30.0 bits (66), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 63 GDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHI 122
GD ++++EY G L + T + Q + + LE +
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTET----------------CMDEGQIAAVCRECLQALEFL 133
Query: 123 SDKRLIHKDIAARNCLISSDLSVKISLSGL 152
++IH+DI + N L+ D SVK++ G
Sbjct: 134 HSNQVIHRDIKSDNILLGMDGSVKLTDFGF 163
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 30.0 bits (66), Expect = 0.79, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 22/139 (15%)
Query: 21 LMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC----RDGDP-HYLLLEYTDW 75
++ K LVHS D EA E ++ H +V++ R GDP Y+++EY
Sbjct: 109 VVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGG 168
Query: 76 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
LK+ + + L ++A+ ++ L ++ L++ D+
Sbjct: 169 QSLKR-----------------SKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPE 211
Query: 136 NCLISSDLSVKISLSGLSK 154
N +++ + I L +S+
Sbjct: 212 NIMLTEEQLKLIDLGAVSR 230
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 30.0 bits (66), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 19/121 (15%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDP----HYLLLEYTDWGDLKQFLLATRXXXXXXX 93
F+RE L+H +V + P Y+++EY D L+ +
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------- 111
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++ +A+ + L +IH+D+ N +IS+ +VK+ G++
Sbjct: 112 --------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
Query: 154 K 154
+
Sbjct: 164 R 164
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 19/121 (15%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDP----HYLLLEYTDWGDLKQFLLATRXXXXXXX 93
F+RE L+H +V + P Y+++EY D L+ +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------- 111
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++ +A+ + L +IH+D+ N LIS+ +VK+ G++
Sbjct: 112 --------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIA 163
Query: 154 K 154
+
Sbjct: 164 R 164
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
R R S +A ++ L+++ S+K ++++D+ N ++ D +KI+ GL K+
Sbjct: 244 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE 301
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 113 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----DTYQKEYYKYRW 166
Y + LGL + + ++H+D+ N L++ + + I L++ D + Y +RW
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRW 198
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 36/123 (29%)
Query: 48 LDHAHVVKMI----GICRDGDPHYLL-LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS 102
++H ++ + I + DG YLL +EY G L ++L S
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-------------------S 104
Query: 103 LSTSQAVT---MAYQVALGLEHISDK---------RLIHKDIAARNCLISSDLSVKISLS 150
L TS V+ +A+ V GL ++ + + H+D+ +RN L+ +D + IS
Sbjct: 105 LHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164
Query: 151 GLS 153
GLS
Sbjct: 165 GLS 167
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
R R S +A ++ L+++ S+K ++++D+ N ++ D +KI+ GL K+
Sbjct: 103 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE 160
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 113 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----DTYQKEYYKYRW 166
Y + LGL + + ++H+D+ N L++ + + I L++ D + Y +RW
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRW 198
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
R R S +A ++ L+++ S+K ++++D+ N ++ D +KI+ GL K+
Sbjct: 101 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE 158
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
R R S +A ++ L+++ S+K ++++D+ N ++ D +KI+ GL K+
Sbjct: 102 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE 159
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 99 RVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
R R S +A ++ L+++ S+K ++++D+ N ++ D +KI+ GL K+
Sbjct: 241 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE 298
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 19/121 (15%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDP----HYLLLEYTDWGDLKQFLLATRXXXXXXX 93
F+RE L+H +V + P Y+++EY D L+ +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------- 111
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++ +A+ + L +IH+D+ N +IS+ +VK+ G++
Sbjct: 112 --------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
Query: 154 K 154
+
Sbjct: 164 R 164
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 25/129 (19%)
Query: 22 MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPH--YLLLEY----T 73
+ + L H + D E +RE D+ +H ++++++ C G H +LLL + T
Sbjct: 59 LKRILCHEQQDRE--EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGT 116
Query: 74 DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
W ++++ + L+ Q + + + GLE I K H+D+
Sbjct: 117 LWNEIERL---------------KDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLK 161
Query: 134 ARNCLISSD 142
N L+ +
Sbjct: 162 PTNILLGDE 170
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 19/121 (15%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDP----HYLLLEYTDWGDLKQFLLATRXXXXXXX 93
F+RE L+H +V + P Y+++EY D L+ +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------- 111
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++ +A+ + L +IH+D+ N +IS+ +VK+ G++
Sbjct: 112 --------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
Query: 154 K 154
+
Sbjct: 164 R 164
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 19/121 (15%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDP----HYLLLEYTDWGDLKQFLLATRXXXXXXX 93
F+RE L+H +V + P Y+++EY D L+ +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------- 111
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++ +A+ + L +IH+D+ N +IS+ +VK+ G++
Sbjct: 112 --------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
Query: 154 K 154
+
Sbjct: 164 R 164
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 19/121 (15%)
Query: 38 FKREIDLFCKLDHAHVVKMIGICRDGDP----HYLLLEYTDWGDLKQFLLATRXXXXXXX 93
F+RE L+H +V + P Y+++EY D L+ +
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------- 128
Query: 94 XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
++ +A+ + L +IH+D+ N +IS+ +VK+ G++
Sbjct: 129 --------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 180
Query: 154 K 154
+
Sbjct: 181 R 181
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 107 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
+ +T+ Q GL H+ ++H+D+ N LIS
Sbjct: 119 EPITLLQQTTSGLAHLHSLNIVHRDLKPHNILIS 152
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 22/123 (17%)
Query: 40 REIDLFCKLD---HAHVVKMIGICRDGDPH-----YLLLEYTDWGDLKQFLLATRXXXXX 91
RE+ L +L+ H +VV+++ +C L+ E+ D DL+ +L
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP--- 115
Query: 92 XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG 151
L + Q GL+ + ++H+D+ N L++S +VK++ G
Sbjct: 116 ----------GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFG 165
Query: 152 LSK 154
L++
Sbjct: 166 LAR 168
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 114 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 160
Q+A +E + K L+H+D+ N + D VK+ GL Q E
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 218
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 114 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 158
Q+ L +I + +IH+++ N I +VKI GL+K+ ++
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHR 168
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 114 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 160
Q+A +E + K L+H+D+ N + D VK+ GL Q E
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 19/156 (12%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHE-FKREIDLFCKLDHAHVVKMIG--ICRDG 63
R K D +L+ K L + EA + E++L +L H ++V+ I R
Sbjct: 20 GRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN 79
Query: 64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
Y+++EY + GDL + RV + Q+ L L+
Sbjct: 80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT-----------QLTLALKECH 128
Query: 124 DKR-----LIHKDIAARNCLISSDLSVKISLSGLSK 154
+ ++H+D+ N + +VK+ GL++
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 19/156 (12%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHE-FKREIDLFCKLDHAHVVKMIG--ICRDG 63
R K D +L+ K L + EA + E++L +L H ++V+ I R
Sbjct: 20 GRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN 79
Query: 64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
Y+++EY + GDL + RV + Q+ L L+
Sbjct: 80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT-----------QLTLALKECH 128
Query: 124 DKR-----LIHKDIAARNCLISSDLSVKISLSGLSK 154
+ ++H+D+ N + +VK+ GL++
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 53/121 (43%), Gaps = 18/121 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+ +RE + L H ++V++ + HYL+ + G+L + ++A
Sbjct: 75 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-------- 126
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL---SVKISLSGL 152
S + A +Q+ + HI ++H+D+ N L++S +VK++ GL
Sbjct: 127 -------YSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGL 179
Query: 153 S 153
+
Sbjct: 180 A 180
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 19/156 (12%)
Query: 7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHE-FKREIDLFCKLDHAHVVKMIG--ICRDG 63
R K D +L+ K L + EA + E++L +L H ++V+ I R
Sbjct: 20 GRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN 79
Query: 64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
Y+++EY + GDL + RV + Q+ L L+
Sbjct: 80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT-----------QLTLALKECH 128
Query: 124 DKR-----LIHKDIAARNCLISSDLSVKISLSGLSK 154
+ ++H+D+ N + +VK+ GL++
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 63 GDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHI 122
GD ++++EY G L + T + Q + + LE +
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTET----------------CMDEGQIAAVCRECLQALEFL 133
Query: 123 SDKRLIHKDIAARNCLISSDLSVKISLSGL 152
++IH++I + N L+ D SVK++ G
Sbjct: 134 HSNQVIHRNIKSDNILLGMDGSVKLTDFGF 163
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/150 (18%), Positives = 65/150 (43%), Gaps = 20/150 (13%)
Query: 18 TSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
T + A ++++K A + +RE + KL H ++V++ ++ HYL+ +
Sbjct: 53 TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 112
Query: 76 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
G+L + ++A S + A Q+ + + ++H+++
Sbjct: 113 GELFEDIVAREF---------------YSEADASHCIQQILESIAYCHSNGIVHRNLKPE 157
Query: 136 NCLISS---DLSVKISLSGLSKDTYQKEYY 162
N L++S +VK++ GL+ + E +
Sbjct: 158 NLLLASKAKGAAVKLADFGLAIEVNDSEAW 187
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 14/112 (12%)
Query: 27 VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATR 86
+ +++ L FKRE+ + + H +VV +G C PH ++ T + R
Sbjct: 65 IERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS-PPHLAII--TSLCKGRTLYSVVR 121
Query: 87 XXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL 138
L ++ +A ++ G+ ++ K ++HKD+ ++N
Sbjct: 122 DAKIV-----------LDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVF 162
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/150 (18%), Positives = 65/150 (43%), Gaps = 20/150 (13%)
Query: 18 TSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
T + A ++++K A + +RE + KL H ++V++ ++ HYL+ +
Sbjct: 30 TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 89
Query: 76 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
G+L + ++A S + A Q+ + + ++H+++
Sbjct: 90 GELFEDIVAREF---------------YSEADASHCIQQILESIAYCHSNGIVHRNLKPE 134
Query: 136 NCLISS---DLSVKISLSGLSKDTYQKEYY 162
N L++S +VK++ GL+ + E +
Sbjct: 135 NLLLASKAKGAAVKLADFGLAIEVNDSEAW 164
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/150 (18%), Positives = 65/150 (43%), Gaps = 20/150 (13%)
Query: 18 TSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
T + A ++++K A + +RE + KL H ++V++ ++ HYL+ +
Sbjct: 30 TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 89
Query: 76 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
G+L + ++A S + A Q+ + + ++H+++
Sbjct: 90 GELFEDIVAREF---------------YSEADASHCIQQILESIAYCHSNGIVHRNLKPE 134
Query: 136 NCLISS---DLSVKISLSGLSKDTYQKEYY 162
N L++S +VK++ GL+ + E +
Sbjct: 135 NLLLASKAKGAAVKLADFGLAIEVNDSEAW 164
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/150 (18%), Positives = 65/150 (43%), Gaps = 20/150 (13%)
Query: 18 TSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
T + A ++++K A + +RE + KL H ++V++ ++ HYL+ +
Sbjct: 29 TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 88
Query: 76 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
G+L + ++A S + A Q+ + + ++H+++
Sbjct: 89 GELFEDIVAREF---------------YSEADASHCIQQILESIAYCHSNGIVHRNLKPE 133
Query: 136 NCLISS---DLSVKISLSGLSKDTYQKEYY 162
N L++S +VK++ GL+ + E +
Sbjct: 134 NLLLASKAKGAAVKLADFGLAIEVNDSEAW 163
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+ +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------- 108
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ ++ H D+ N ++
Sbjct: 109 -----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+ +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------- 108
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ ++ H D+ N ++
Sbjct: 109 -----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+ +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------- 108
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ ++ H D+ N ++
Sbjct: 109 -----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+ +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------- 108
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ ++ H D+ N ++
Sbjct: 109 -----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+ +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------- 108
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ ++ H D+ N ++
Sbjct: 109 -----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+ +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------- 108
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ ++ H D+ N ++
Sbjct: 109 -----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+ +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------- 108
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ ++ H D+ N ++
Sbjct: 109 -----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+ +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------- 108
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ ++ H D+ N ++
Sbjct: 109 -----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 51/131 (38%), Gaps = 18/131 (13%)
Query: 21 LMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ 80
L++K + + D A F E D+ + VV++ +D Y+++EY GDL
Sbjct: 107 LLSKFEMIKRSDSAF--FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN 164
Query: 81 FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
+ + A +V L L+ I LIH+D+ N L+
Sbjct: 165 LM----------------SNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD 208
Query: 141 SDLSVKISLSG 151
+K++ G
Sbjct: 209 KHGHLKLADFG 219
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+ +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------- 108
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ ++ H D+ N ++
Sbjct: 109 -----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+ +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------- 107
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ ++ H D+ N ++
Sbjct: 108 -----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 146
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+ +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------- 107
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ ++ H D+ N ++
Sbjct: 108 -----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 146
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+ +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------- 108
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ ++ H D+ N ++
Sbjct: 109 -----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 101 RSLSTSQAVTMAYQVALGLEHI--------SDKRLIHKDIAARNCLISSDLSVKISLSGL 152
++L A+ +A A GL H+ + H+D +RN L+ S+L I+ GL
Sbjct: 100 QTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGL 159
Query: 153 S 153
+
Sbjct: 160 A 160
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+ +RE+ + ++ H +V+ + + + L+LE G+L FL
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------- 108
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
SL+ +A Q+ G+ ++ ++ H D+ N ++
Sbjct: 109 -----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 56/120 (46%), Gaps = 20/120 (16%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
+ EI + K+ H ++V + I +YL+++ G+L +L
Sbjct: 54 ENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE-------------- 99
Query: 99 RVRSLSTSQAVTMAYQVAL-GLEHISDKRLIHKDIAARNCL-ISSDLSVKISLS--GLSK 154
R + T + ++ Q L ++++ + ++H+D+ N L ++ + + KI ++ GLSK
Sbjct: 100 --RGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
LS YQ ++ + +IH+D+ N LI+S+ +K+ GL++
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
LS YQ ++ + +IH+D+ N LI+S+ +K+ GL++
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
LS YQ ++ + +IH+D+ N LI+S+ +K+ GL++
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 18/119 (15%)
Query: 39 KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
+ EI + +L H +++K+ I L+LE G+L ++
Sbjct: 96 RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY----------- 144
Query: 99 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSK 154
S A Q+ + ++ + ++H+D+ N L ++ D +KI+ GLSK
Sbjct: 145 ----YSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 118 GLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
GLE++ ++H+D+ N L+ + +K++ GL+K
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 26.9 bits (58), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 111 MAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLS 153
+A + LEH+ K +IH+D+ N LI++ VK+ G+S
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 26.9 bits (58), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 13/121 (10%)
Query: 40 REIDLFCKLDHAHVVKM--IGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
REI L +L H +V+ + + + +LL +Y + DL + R
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQL 125
Query: 98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLS 153
PR ++ YQ+ G+ ++ ++H+D+ N L+ + VKI+ G +
Sbjct: 126 PR------GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 179
Query: 154 K 154
+
Sbjct: 180 R 180
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 26.9 bits (58), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 111 MAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLS 153
+A + LEH+ K +IH+D+ N LI++ VK+ G+S
Sbjct: 114 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 26.6 bits (57), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 50 HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQA 108
H+HVV+ + D + EY + G L + R+ S ++
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY------------RIMSYFKEAEL 115
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
+ QV GL +I L+H DI N IS
Sbjct: 116 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 147
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 26.6 bits (57), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 50 HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQA 108
H+HVV+ + D + EY + G L + R+ S ++
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY------------RIMSYFKEAEL 113
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
+ QV GL +I L+H DI N IS
Sbjct: 114 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 145
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 26.6 bits (57), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 50 HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQA 108
H+HVV+ + D + EY + G L + R+ S ++
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY------------RIMSYFKEAEL 117
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
+ QV GL +I L+H DI N IS
Sbjct: 118 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 149
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 26.6 bits (57), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 18/121 (14%)
Query: 36 HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
+ +RE + L H ++V++ + HYL+ + G+L + ++A
Sbjct: 66 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY-------- 117
Query: 96 XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL---SVKISLSGL 152
S + A Q+ + H ++H+D+ N L++S L +VK++ GL
Sbjct: 118 -------YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGL 170
Query: 153 S 153
+
Sbjct: 171 A 171
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 26.6 bits (57), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 50 HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQA 108
H+HVV+ + D + EY + G L + R+ S ++
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY------------RIMSYFKEAEL 115
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
+ QV GL +I L+H DI N IS
Sbjct: 116 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 147
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,711,825
Number of Sequences: 62578
Number of extensions: 157765
Number of successful extensions: 1817
Number of sequences better than 100.0: 851
Number of HSP's better than 100.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 534
Number of HSP's gapped (non-prelim): 894
length of query: 183
length of database: 14,973,337
effective HSP length: 93
effective length of query: 90
effective length of database: 9,153,583
effective search space: 823822470
effective search space used: 823822470
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)